BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16201
(240 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|380027208|ref|XP_003697321.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Apis
florea]
Length = 1024
Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 149/163 (91%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDDIKHTTLSERGALKEA+RCLKCADAPCQKSCPTQ+DIKSFITSIS+KNYYGAAK
Sbjct: 57 LTKNFDDIKHTTLSERGALKEAARCLKCADAPCQKSCPTQLDIKSFITSISNKNYYGAAK 116
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++FK M ISQ R P
Sbjct: 117 AILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGPINIGGLQQFATDIFKQMNISQTRIP 176
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
KV + DTKIAL+GCGPASLSCATFL+R+GY+++ I+EK Y
Sbjct: 177 GQKVSYADTKIALLGCGPASLSCATFLARLGYNNVIIFEKQNY 219
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D+VTNVSPRI+KGTTSRH YGPEQGSFLNIELISEK+ W
Sbjct: 579 DLVTNVSPRIIKGTTSRHHYGPEQGSFLNIELISEKSEAYW 619
>gi|156543632|ref|XP_001604620.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Nasonia
vitripennis]
Length = 1025
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/174 (78%), Positives = 151/174 (86%), Gaps = 4/174 (2%)
Query: 11 NVFTSCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITS 66
N+ + C L NFDDIKHTTLSERGAL EASRCLKCADAPCQKSCPTQ+DIKSFITS
Sbjct: 48 NIHSKCDSCTPLTKNFDDIKHTTLSERGALYEASRCLKCADAPCQKSCPTQLDIKSFITS 107
Query: 67 ISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
IS+KNYYGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++F
Sbjct: 108 ISNKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLFASEEGPINIGGLQQFATDIF 167
Query: 127 KDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
K M I Q R P V +TKIA+IGCGPASLSCATFL+R+GYDDITI+EK Y
Sbjct: 168 KQMNIPQTRIPGQTVAHANTKIAMIGCGPASLSCATFLARLGYDDITIFEKQKY 221
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 10/94 (10%)
Query: 151 IGCGPASLSCA----TFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGS 206
+ P + SCA +F + G+ + + DMVTN+SPRIVKGTT + YGPEQ S
Sbjct: 548 LASAPPATSCAMIRRSFEAGWGFAVTKTFGLDK-DMVTNISPRIVKGTTDGYHYGPEQSS 606
Query: 207 FLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
FLNIELISEKTA W CK ++ + +F K
Sbjct: 607 FLNIELISEKTAAYW-----CKGITELKRDFPEK 635
>gi|110760297|ref|XP_393690.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1
[Apis mellifera]
Length = 1024
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 137/174 (78%), Positives = 153/174 (87%), Gaps = 4/174 (2%)
Query: 11 NVFTSCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITS 66
N+ +CS L NFDDIKHTTLSERGALKEA+RCLKCADAPCQKSCPTQ+DIKSFITS
Sbjct: 46 NINENCSKCPPLTKNFDDIKHTTLSERGALKEAARCLKCADAPCQKSCPTQLDIKSFITS 105
Query: 67 ISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
IS+KNYYGAAKAI SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++F
Sbjct: 106 ISNKNYYGAAKAILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGPINIGGLQQFATDIF 165
Query: 127 KDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
K M ISQ R P V DTKIAL+GCGPASLSCATFL+R+GY++ITI+EK Y
Sbjct: 166 KQMNISQTRIPGQNVSHADTKIALLGCGPASLSCATFLARLGYNNITIFEKQNY 219
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRI+KGTTSRH YGPEQGSFLNIELISEK+ W C + + +F K
Sbjct: 579 DLVTNVSPRIIKGTTSRHHYGPEQGSFLNIELISEKSEAYW-----CNSIRELKKDFPTK 633
>gi|383863176|ref|XP_003707058.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Megachile rotundata]
Length = 1027
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 147/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NFDDIKHTTLSERGALKEA+RCLKC DAPCQKSCPTQ+DIKSFITSIS+KNYYGAA
Sbjct: 55 SLTKNFDDIKHTTLSERGALKEAARCLKCTDAPCQKSCPTQLDIKSFITSISNKNYYGAA 114
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAI SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++FK M I Q R
Sbjct: 115 KAILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGPINIGGLQQFATDIFKQMNIPQTRI 174
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P V DTKIALIGCGPASLSCATFL+R+GYDDITI+EK +
Sbjct: 175 PGQSVPHADTKIALIGCGPASLSCATFLARLGYDDITIFEKQNH 218
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRI+KGTTSRH YGPEQ SFLNIELISEKT W C ++ + +F K
Sbjct: 578 DLVTNVSPRIIKGTTSRHHYGPEQSSFLNIELISEKTEAYW-----CNSVTELKRDFPTK 632
>gi|307201146|gb|EFN81057.1| Dihydropyrimidine dehydrogenase [NADP+] [Harpegnathos saltator]
Length = 962
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 145/163 (88%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDDIKHTTLSERGALKEA+RCLKC DAPCQKSCPTQ+DIKSFITSIS+KNYYGAAK
Sbjct: 20 LTKNFDDIKHTTLSERGALKEAARCLKCVDAPCQKSCPTQLDIKSFITSISNKNYYGAAK 79
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQ FA ++FK M I QIR P
Sbjct: 80 AILSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQHFAVDIFKRMNIPQIRIP 139
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ V +TKIAL+GCGPASLSCATFL+R+GYDDITI+EK Y
Sbjct: 140 NQTVSHANTKIALLGCGPASLSCATFLARLGYDDITIFEKEKY 182
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIVKGTT H YGP Q SFLNIELISEKTA W C ++ + +F K
Sbjct: 543 DLVTNVSPRIVKGTTPGHYYGPGQSSFLNIELISEKTADYW-----CGSITELKRDFPTK 597
>gi|312383321|gb|EFR28456.1| hypothetical protein AND_03577 [Anopheles darlingi]
Length = 1672
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 148/164 (90%), Gaps = 1/164 (0%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTL ER AL+EASRCLKCADAPCQKSCPTQ+DIKSFITSI+++NYYGAAK
Sbjct: 687 LTNDFSDIKHTTLGERAALREASRCLKCADAPCQKSCPTQLDIKSFITSIANRNYYGAAK 746
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AIFSDNPLGLTCGMVCPTSDLC+GGCNL A EEGPINIGGLQQFAT+VF+ MG+ QIRPP
Sbjct: 747 AIFSDNPLGLTCGMVCPTSDLCVGGCNLAAVEEGPINIGGLQQFATDVFRRMGLRQIRPP 806
Query: 138 DAK-VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + P+ +IAL+G GPASLSCATFL+R+GY DIT+YE+N Y
Sbjct: 807 NGRPLAHPNKRIALLGGGPASLSCATFLARLGYTDITVYERNAY 850
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G T+ H YGP+QG+FLNIELISEK W+
Sbjct: 1213 DVVTNVSPRIVRGVTAGHSYGPQQGAFLNIELISEKCPDYWL 1254
>gi|157125488|ref|XP_001654354.1| dihydropyrimidine dehydrogenase [Aedes aegypti]
gi|108873619|gb|EAT37844.1| AAEL010204-PA [Aedes aegypti]
Length = 1056
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/169 (79%), Positives = 152/169 (89%), Gaps = 2/169 (1%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TSC+ L N+F DIKHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KNY
Sbjct: 72 TSCTPLTNDFSDIKHTTLSERAALREAARCLKCADAPCQKSCPTQLDIKSFITSIANKNY 131
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNL AAEEG INIGGLQQFATEVFK MG+
Sbjct: 132 YGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLQAAEEGAINIGGLQQFATEVFKRMGLH 191
Query: 133 QIRPPD-AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QI PP+ A + FP+ K+AL+G GPASLSCATFL R+GY DITIYE+ +Y
Sbjct: 192 QIVPPNVAPLKFPNKKVALLGGGPASLSCATFLGRLGYKDITIYERRSY 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
DMVTNVSPRIV+G TS H +GP+QG+FLNIELISEK A W+
Sbjct: 600 DMVTNVSPRIVRGVTSGHTFGPQQGAFLNIELISEKCAAYWL 641
>gi|340720146|ref|XP_003398504.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 2
[Bombus terrestris]
Length = 1022
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/163 (80%), Positives = 144/163 (88%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDDIKHTTLSER ALKEA+RCLKC DAPCQKSCPTQ+DIKSFITSIS+KNYYGAAK
Sbjct: 57 LTKNFDDIKHTTLSERSALKEAARCLKCTDAPCQKSCPTQLDIKSFITSISNKNYYGAAK 116
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++FK M I Q R P
Sbjct: 117 AILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGPINIGGLQQFATDIFKQMNIPQTRIP 176
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
V DTKIAL GCGPASLSCA+FL+R+GYDDITI+EK Y
Sbjct: 177 GQTVPHSDTKIALFGCGPASLSCASFLARLGYDDITIFEKENY 219
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 159 SCATFLSRMGYDDITIYEKNTY----DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELIS 214
+C+T + R + T+ D+VTNVSPRI+KGTTSR+ YGPEQ SFLNIELIS
Sbjct: 549 TCSTMIRRAFEAGWSFVVTKTFSLDKDLVTNVSPRIIKGTTSRYHYGPEQSSFLNIELIS 608
Query: 215 EKTAYQWVYYSNCKVLSNTRTEFLNK 240
EK+ W C ++ + +F +K
Sbjct: 609 EKSEAYW-----CNSITELKKDFPSK 629
>gi|157103945|ref|XP_001648193.1| dihydropyrimidine dehydrogenase [Aedes aegypti]
gi|108869301|gb|EAT33526.1| AAEL014199-PA [Aedes aegypti]
Length = 1037
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/169 (79%), Positives = 152/169 (89%), Gaps = 2/169 (1%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TSC+ L N+F DIKHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KNY
Sbjct: 53 TSCTPLTNDFSDIKHTTLSERAALREAARCLKCADAPCQKSCPTQLDIKSFITSIANKNY 112
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNL AAEEG INIGGLQQFATEVFK MG+
Sbjct: 113 YGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLQAAEEGAINIGGLQQFATEVFKRMGLH 172
Query: 133 QIRPPD-AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QI PP+ A + FP+ K+AL+G GPASLSCATFL R+GY DITIYE+ +Y
Sbjct: 173 QIVPPNVAPLKFPNKKVALLGGGPASLSCATFLGRLGYKDITIYERRSY 221
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
DMVTNVSPRIV+G TS H +GP+QG+FLNIELISEK A W+
Sbjct: 581 DMVTNVSPRIVRGVTSGHTFGPQQGAFLNIELISEKCAAYWL 622
>gi|195130537|ref|XP_002009708.1| GI15089 [Drosophila mojavensis]
gi|193908158|gb|EDW07025.1| GI15089 [Drosophila mojavensis]
Length = 1035
Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 132/165 (80%), Positives = 151/165 (91%), Gaps = 1/165 (0%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NNF+DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANNFEDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKQMGVHQRRA 175
Query: 137 PDAK-VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P+ K + P+ KIALIG GPASLSCATFL+R+GYDD+TIYE+ +Y
Sbjct: 176 PNLKPLPQPNKKIALIGGGPASLSCATFLARLGYDDVTIYERRSY 220
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
DMVTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 577 DMVTNVSPRIVRGTTSGYRYGPQQGCFLNIELISEKRAEYWL 618
>gi|170040022|ref|XP_001847813.1| dihydropyrimidine dehydrogenase [Culex quinquefasciatus]
gi|167863593|gb|EDS26976.1| dihydropyrimidine dehydrogenase [Culex quinquefasciatus]
Length = 585
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/169 (80%), Positives = 150/169 (88%), Gaps = 2/169 (1%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TSC+ L N+F DIKHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSIS+KNY
Sbjct: 53 TSCTPLTNDFSDIKHTTLSERAALREATRCLKCADAPCQKSCPTQLDIKSFITSISNKNY 112
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNL AAEEG INIGGLQQFATE FK MG+
Sbjct: 113 YGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLQAAEEGAINIGGLQQFATETFKRMGLH 172
Query: 133 QIRPPD-AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QI PP+ A + FP+ KI+L+G GPASLSCATFL R+GY DITIYEK Y
Sbjct: 173 QIVPPNVAPLKFPNKKISLLGGGPASLSCATFLGRLGYKDITIYEKRDY 221
>gi|340720144|ref|XP_003398503.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1
[Bombus terrestris]
Length = 1024
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 132/163 (80%), Positives = 144/163 (88%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDDIKHTTLSER ALKEA+RCLKC DAPCQKSCPTQ+DIKSFITSIS+KNYYGAAK
Sbjct: 57 LTKNFDDIKHTTLSERSALKEAARCLKCTDAPCQKSCPTQLDIKSFITSISNKNYYGAAK 116
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++FK M I Q R P
Sbjct: 117 AILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGPINIGGLQQFATDIFKQMNIPQTRIP 176
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
V DTKIAL GCGPASLSCA+FL+R+GYDDITI+EK Y
Sbjct: 177 GQTVPHSDTKIALFGCGPASLSCASFLARLGYDDITIFEKENY 219
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 159 SCATFLSRMGYDDITIYEKNTY----DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELIS 214
+C+T + R + T+ D+VTNVSPRI+KGTTSR+ YGPEQ SFLNIELIS
Sbjct: 553 TCSTMIRRAFEAGWSFVVTKTFSLDKDLVTNVSPRIIKGTTSRYHYGPEQSSFLNIELIS 612
Query: 215 EKTAYQWVYYSNCKVLSNTRTEFLNK 240
EK+ W C ++ + +F +K
Sbjct: 613 EKSEAYW-----CNSITELKKDFPSK 633
>gi|350408298|ref|XP_003488363.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Bombus
impatiens]
Length = 1024
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 147/168 (87%), Gaps = 1/168 (0%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T C+ L NFDDIKHTTLSER ALKEA+RCLKC DAPCQKSCPTQ+DIKSFITSIS+KNY
Sbjct: 52 TKCATLTKNFDDIKHTTLSERSALKEAARCLKCTDAPCQKSCPTQLDIKSFITSISNKNY 111
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAKAI SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFAT++FK M I
Sbjct: 112 YGAAKAILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGPINIGGLQQFATDIFKQMNIP 171
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
Q R P V DTKIAL GCGPASLSCA+FL+R+GYD+ITI+EK Y
Sbjct: 172 QTRIPGQTVLHSDTKIALFGCGPASLSCASFLARLGYDNITIFEKENY 219
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 9/86 (10%)
Query: 159 SCATFLSRMGYDDITIYEKNTY----DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELIS 214
+C+T + R + T+ D+VTNVSPRI+KGTTSR+ YGPEQ SFLNIELIS
Sbjct: 553 TCSTMIRRAFEAGWSFVVTKTFSLDKDLVTNVSPRIIKGTTSRYHYGPEQSSFLNIELIS 612
Query: 215 EKTAYQWVYYSNCKVLSNTRTEFLNK 240
EK+ W CK ++ + +F +K
Sbjct: 613 EKSEAYW-----CKSITELKKDFPSK 633
>gi|47086253|ref|NP_998058.1| dihydropyrimidine dehydrogenase [NADP(+)] [Danio rerio]
gi|82185925|sp|Q6NYG8.1|DPYD_DANRE RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|42793999|gb|AAH66602.1| Dihydropyrimidine dehydrogenase [Danio rerio]
Length = 1022
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 155/184 (84%), Gaps = 11/184 (5%)
Query: 2 PEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIK 61
PE+S + +N L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIK
Sbjct: 45 PERSCDSCVN------LENNFDDIKHTTLSERGALREALRCLKCADAPCQKSCPTNLDIK 98
Query: 62 SFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQF 121
SFITSIS+KNYYGAAKAI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQF
Sbjct: 99 SFITSISNKNYYGAAKAILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQF 158
Query: 122 ATEVFKDMGISQIRPPDAKV--DFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
ATEVF MGI QIR P+ + P T+IALIGCGPAS+SCA+FL+R+GYD+ITI+E
Sbjct: 159 ATEVFSKMGIPQIRNPELPTADNMPKSFHTRIALIGCGPASISCASFLARLGYDNITIFE 218
Query: 177 KNTY 180
K Y
Sbjct: 219 KQKY 222
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS H++GP QGSFLNIELISEKTA W CK ++ + +F
Sbjct: 581 DLVTNVSPRIVRGTTSGHIFGPGQGSFLNIELISEKTAAYW-----CKSVAELKADF 632
>gi|147899974|ref|NP_001087488.1| dihydropyrimidine dehydrogenase [Xenopus laevis]
gi|51258279|gb|AAH80003.1| MGC81821 protein [Xenopus laevis]
Length = 940
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 149/175 (85%), Gaps = 9/175 (5%)
Query: 15 SCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
SCS L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 SCSKCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK M
Sbjct: 108 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEIFKTMN 167
Query: 131 ISQIRPP-----DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P +A TKIALIG GPAS+SCATFL+R+GY DITI+EK TY
Sbjct: 168 IPQIRNPLLPSTEAMPAQYTTKIALIGAGPASISCATFLARLGYSDITIFEKQTY 222
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP QGSFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGSIYGPGQGSFLNIELISEKTAAYW-----CQSITELKADF 632
>gi|198434443|ref|XP_002130803.1| PREDICTED: similar to Dihydropyrimidine dehydrogenase [Ciona
intestinalis]
Length = 1030
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/173 (78%), Positives = 151/173 (87%), Gaps = 6/173 (3%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+SC L NFDDIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+
Sbjct: 51 SSCKPLEKNFDDIKHTTLSERGALREAARCLKCADAPCQKSCPTQLDIKSFITSIANKNF 110
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YG+AKAI SDNPLGLTCGMVCPTSDLC+GGCNLY EEGPINIGGLQQFATEVFK+MGI
Sbjct: 111 YGSAKAILSDNPLGLTCGMVCPTSDLCVGGCNLYGTEEGPINIGGLQQFATEVFKNMGIP 170
Query: 133 QIRPPD--AKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QIR P A D P T KIAL GCGPAS+SCATFL+R+GY+D+TI+EK Y
Sbjct: 171 QIRDPSMGALEDLPSTYRSKIALFGCGPASISCATFLARLGYNDLTIFEKKDY 223
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS H++GP QGSFLNIELISEKT W C+ ++ + +F K
Sbjct: 585 DIVTNVSPRIVRGTTSGHMFGPGQGSFLNIELISEKTCTYW-----CRSVTELKRDFPEK 639
>gi|58376848|ref|XP_309214.2| AGAP001021-PA [Anopheles gambiae str. PEST]
gi|347964950|ref|XP_003437170.1| AGAP001021-PB [Anopheles gambiae str. PEST]
gi|55245087|gb|EAA04946.2| AGAP001021-PA [Anopheles gambiae str. PEST]
gi|333466553|gb|EGK96290.1| AGAP001021-PB [Anopheles gambiae str. PEST]
Length = 1039
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 150/169 (88%), Gaps = 2/169 (1%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TSC+ L N+F DIKHTTLSER ALKEA+RCLKCADAPCQKSCPTQ+DIKSFITSI+++NY
Sbjct: 53 TSCTPLTNDFSDIKHTTLSERAALKEAARCLKCADAPCQKSCPTQLDIKSFITSIANRNY 112
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNL A EEGPINIGGLQQFATEVFK MG+
Sbjct: 113 YGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLAAVEEGPINIGGLQQFATEVFKRMGLR 172
Query: 133 QIRPPD-AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QI PP A + P+ +IAL+G GPASLSCATFL R+GY D+T+YE+ +Y
Sbjct: 173 QIVPPGVAPLKHPNKRIALLGGGPASLSCATFLGRLGYRDVTVYERRSY 221
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
DMVTNVSPRIV+G T+ YGP+QG+FLNIELISEK W+
Sbjct: 579 DMVTNVSPRIVRGVTAGQHYGPQQGAFLNIELISEKCCDYWL 620
>gi|332028865|gb|EGI68891.1| Dihydropyrimidine dehydrogenase [Acromyrmex echinatior]
Length = 1019
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/164 (78%), Positives = 144/164 (87%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NFDDIKHTTLSERGALKEA+RCLKC DAPCQKSCPTQ+DIK+FITSIS+KNYYGAA
Sbjct: 52 SLTKNFDDIKHTTLSERGALKEAARCLKCVDAPCQKSCPTQLDIKAFITSISNKNYYGAA 111
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAI SDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQ FA ++FK M I Q +
Sbjct: 112 KAILSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQHFAVDIFKKMNIPQTKK 171
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ V +TKIAL+GCGPASLSCA+FL+R+GYDDITI+EK Y
Sbjct: 172 LNQTVPHANTKIALLGCGPASLSCASFLARLGYDDITIFEKEKY 215
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIVKGTTSRH YGPEQGSFLNIELISEKTA W C ++ + +F K
Sbjct: 576 DLVTNVSPRIVKGTTSRHHYGPEQGSFLNIELISEKTADYW-----CGSITELKRDFPTK 630
>gi|405954438|gb|EKC21880.1| Dihydropyrimidine dehydrogenase [NADP+] [Crassostrea gigas]
Length = 903
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/166 (78%), Positives = 149/166 (89%), Gaps = 5/166 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NNF+DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KNYYGAAKAI
Sbjct: 80 NNFEDIKHTTLSERGALREAARCLKCADAPCQKSCPTQLDIKSFITSIANKNYYGAAKAI 139
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK M I QIR P
Sbjct: 140 LSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEIFKAMKIPQIRDPSM 199
Query: 140 KV--DFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ PD+ K+AL+GCGPAS+SCATFL+RMGY ++TI+EK+ Y
Sbjct: 200 PPFDNLPDSYKAKVALLGCGPASISCATFLARMGYTNLTIFEKHDY 245
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS H+YGP QGS+LNIELISEKTA W C+ ++ + +F
Sbjct: 604 DIVTNVSPRIVRGTTSGHIYGPGQGSYLNIELISEKTAAYW-----CQSVTELKKDF 655
>gi|443734974|gb|ELU18829.1| hypothetical protein CAPTEDRAFT_161594 [Capitella teleta]
Length = 1026
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/173 (76%), Positives = 152/173 (87%), Gaps = 6/173 (3%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T+C LV NFDDIKHTTLSERGALKE++RCLKCADAPCQKSCPTQ+D+KSFITSIS+KNY
Sbjct: 49 TTCEPLVQNFDDIKHTTLSERGALKESARCLKCADAPCQKSCPTQLDVKSFITSISNKNY 108
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YG+AKAI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFA E FK+M I
Sbjct: 109 YGSAKAILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFAVEGFKEMRIP 168
Query: 133 QIRPPD--AKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QIR P K + P+T KIA+IGCGPAS+SCATFL+R+GY DIT++E+ +
Sbjct: 169 QIRDPSLPKKSELPETYRAKIAMIGCGPASISCATFLARLGYSDITVFERRPF 221
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS ++GP QGSFLNIELISEKTA W CK + + +F K
Sbjct: 581 DLVTNVSPRIVRGTTSGQVFGPGQGSFLNIELISEKTAAFW-----CKGVKELKRDFPTK 635
>gi|321459596|gb|EFX70648.1| hypothetical protein DAPPUDRAFT_202177 [Daphnia pulex]
Length = 1040
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/165 (80%), Positives = 146/165 (88%), Gaps = 4/165 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDDIKHTTLSER A++EA+RCLKCADAPCQKSCPTQ+D+KSFI SIS KNYYGAAK
Sbjct: 58 LFQNFDDIKHTTLSERAAVREAARCLKCADAPCQKSCPTQLDVKSFIGSISTKNYYGAAK 117
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AIFSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK M I QI PP
Sbjct: 118 AIFSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEMFKLMKIPQILPP 177
Query: 138 DAKVDFPD----TKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
D VD +KIAL+GCGPAS+SCATFL+RMGY D+TI+EKN
Sbjct: 178 DVIVDELGPGYRSKIALLGCGPASISCATFLARMGYSDLTIFEKN 222
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 5/59 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLN 239
D+VTNVSPRIV+GTTS H+YGP QGSFLNIELISEKTA W C+ ++ + +F N
Sbjct: 585 DIVTNVSPRIVRGTTSGHIYGPGQGSFLNIELISEKTAAYW-----CQSVTELKADFPN 638
>gi|195355035|ref|XP_002043999.1| GM13670 [Drosophila sechellia]
gi|194129244|gb|EDW51287.1| GM13670 [Drosophila sechellia]
Length = 922
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 147/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G GPASLSCATFL+R+GY D+TIYE+ +Y
Sbjct: 176 PQAEANPLSQKIALVGGGPASLSCATFLARLGYRDVTIYERRSY 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|195479863|ref|XP_002101056.1| GE17405 [Drosophila yakuba]
gi|194188580|gb|EDX02164.1| GE17405 [Drosophila yakuba]
Length = 1031
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 147/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G GPASLSCATFL+R+GY D+TIYE+ +Y
Sbjct: 176 PQAEANPLSQKIALVGGGPASLSCATFLARLGYRDVTIYERRSY 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|195565891|ref|XP_002106529.1| GD16077 [Drosophila simulans]
gi|194203907|gb|EDX17483.1| GD16077 [Drosophila simulans]
Length = 1031
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 147/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G GPASLSCATFL+R+GY D+TIYE+ +Y
Sbjct: 176 PQAEANPLSQKIALVGGGPASLSCATFLARLGYRDVTIYERRSY 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|18858217|ref|NP_572538.1| suppressor of rudimentary, isoform B [Drosophila melanogaster]
gi|24640763|ref|NP_727320.1| suppressor of rudimentary, isoform C [Drosophila melanogaster]
gi|10728539|gb|AAF46461.2| suppressor of rudimentary, isoform B [Drosophila melanogaster]
gi|22831986|gb|AAN09247.1| suppressor of rudimentary, isoform C [Drosophila melanogaster]
gi|24850449|gb|AAN64918.1| dihydropyrimidine dehydrogenase [Drosophila melanogaster]
gi|189181839|gb|ACD81696.1| GH13260p [Drosophila melanogaster]
Length = 1031
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 147/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G GPASLSCATFL+R+GY D+TIYE+ +Y
Sbjct: 176 PQAEANPLSQKIALVGGGPASLSCATFLARLGYRDVTIYERRSY 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|291244574|ref|XP_002742170.1| PREDICTED: dihydropyrimidine dehydrogenase-like [Saccoglossus
kowalevskii]
Length = 1025
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 130/169 (76%), Positives = 150/169 (88%), Gaps = 5/169 (2%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NNFDDIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIK+FI+SI+ KNYYGAA
Sbjct: 53 TLKNNFDDIKHTTLSERGALREAARCLKCADAPCQKSCPTQLDIKAFISSIATKNYYGAA 112
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFATE+F+ M I QIR
Sbjct: 113 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLFASEEGPINIGGLQQFATEMFQKMRIPQIRD 172
Query: 137 PD--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A D P+ +KI+LIGCGPAS+SCATFL+R+GY +I +YEK Y
Sbjct: 173 PSLPALDDLPESYQSKISLIGCGPASISCATFLARLGYSNIVVYEKQEY 221
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS H+YGP QGSFLNIELISEKTA W C+ ++ + +F +K
Sbjct: 580 DIVTNVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTAAYW-----CQTVTELKADFKDK 634
>gi|348531404|ref|XP_003453199.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Oreochromis niloticus]
Length = 1021
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/168 (78%), Positives = 148/168 (88%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+KNYYGAA+
Sbjct: 52 LENNFDDIKHTTLSERGALREALRCLKCADAPCQKSCPTNLDIKSFITSISNKNYYGAAR 111
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTS+LC+GGCNLYA+EEGPINIGGLQQFATEVF MGI QIR P
Sbjct: 112 AILSDNPLGLTCGMVCPTSELCVGGCNLYASEEGPINIGGLQQFATEVFSKMGIPQIRNP 171
Query: 138 D--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + P+ T IALIGCGPAS+SCA+FL+R+GYD+ITI+EK Y
Sbjct: 172 ELPPSNEMPESYHTPIALIGCGPASISCASFLARLGYDNITIFEKQKY 219
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLN 239
D+VTNVSPRIV+GTTS LYGP GSFLNIELISEKTA W C+ ++ + +F N
Sbjct: 578 DLVTNVSPRIVRGTTSGPLYGPGLGSFLNIELISEKTAAYW-----CQSVAELKKDFPN 631
>gi|47211504|emb|CAF94123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1103
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 149/172 (86%), Gaps = 5/172 (2%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
T L NNFDDIKHTTLSERGAL+EA RCLKC DAPCQKSCPT +DIKSFITSIS+KNYY
Sbjct: 124 TCMKLENNFDDIKHTTLSERGALREALRCLKCVDAPCQKSCPTNLDIKSFITSISNKNYY 183
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GAA+AI SDNPLGLTCGMVCPTS+LC+GGCNLYA+EEGPINIGGLQQFATEVFK MGI+Q
Sbjct: 184 GAARAILSDNPLGLTCGMVCPTSELCVGGCNLYASEEGPINIGGLQQFATEVFKQMGIAQ 243
Query: 134 IRPPD--AKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IR P+ + P++ +ALIGCGPAS+SCA+FL R+GYD+ITI+EK Y
Sbjct: 244 IRNPELPQACEMPESYHAPVALIGCGPASISCASFLGRLGYDNITIFEKQNY 295
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLN 239
D+VTNVSPRIV+GTTS ++YGP QGSFLNIELISEKTA W C+ ++ + F N
Sbjct: 654 DLVTNVSPRIVRGTTSGNVYGPGQGSFLNIELISEKTAAYW-----CQSVAELKRSFPN 707
>gi|195393212|ref|XP_002055248.1| GJ18897 [Drosophila virilis]
gi|194149758|gb|EDW65449.1| GJ18897 [Drosophila virilis]
Length = 1031
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 130/165 (78%), Positives = 148/165 (89%), Gaps = 1/165 (0%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NNF+DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANNFEDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKRMGVHQRRS 175
Query: 137 PDAK-VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
D K + P+ KIAL+G GPASLSCATFL R+GY D+TIYE+ +Y
Sbjct: 176 RDLKPLAQPNKKIALLGGGPASLSCATFLGRLGYTDVTIYERRSY 220
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
DMVTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 577 DMVTNVSPRIVRGTTSGYRYGPQQGCFLNIELISEKRAEYWL 618
>gi|194890619|ref|XP_001977354.1| GG18994 [Drosophila erecta]
gi|190649003|gb|EDV46281.1| GG18994 [Drosophila erecta]
Length = 1033
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 146/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G GPASLSCATFL+R+GY D+TIYE+ Y
Sbjct: 176 PQAEANPLSQKIALVGGGPASLSCATFLARLGYRDVTIYERRNY 219
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
++VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 NLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|391327121|ref|XP_003738055.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 3
[Metaseiulus occidentalis]
Length = 1039
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/167 (76%), Positives = 146/167 (87%), Gaps = 3/167 (1%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NFDDIKHTTLSERGALKEA+RCLKCADAPCQKSCPTQ+D+K FI+ I++KNYYGAA
Sbjct: 57 SLEKNFDDIKHTTLSERGALKEAARCLKCADAPCQKSCPTQLDVKHFISCIANKNYYGAA 116
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
K IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFAT++F+ M I Q P
Sbjct: 117 KQIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATDIFRKMKIPQTLP 176
Query: 137 PDAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P+ + P++ KIALIGCGPAS+SCATFL+R+GY DITI+EK Y
Sbjct: 177 PEIAGNLPESYKAKIALIGCGPASMSCATFLARLGYSDITIFEKREY 223
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D+VTNVSPRIV+GTTS H+YGP QGSFLNIELISEKT+ W
Sbjct: 582 DVVTNVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTSAYW 622
>gi|391327119|ref|XP_003738054.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 2
[Metaseiulus occidentalis]
Length = 1031
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/167 (76%), Positives = 146/167 (87%), Gaps = 3/167 (1%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NFDDIKHTTLSERGALKEA+RCLKCADAPCQKSCPTQ+D+K FI+ I++KNYYGAA
Sbjct: 57 SLEKNFDDIKHTTLSERGALKEAARCLKCADAPCQKSCPTQLDVKHFISCIANKNYYGAA 116
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
K IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFAT++F+ M I Q P
Sbjct: 117 KQIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATDIFRKMKIPQTLP 176
Query: 137 PDAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P+ + P++ KIALIGCGPAS+SCATFL+R+GY DITI+EK Y
Sbjct: 177 PEIAGNLPESYKAKIALIGCGPASMSCATFLARLGYSDITIFEKREY 223
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D+VTNVSPRIV+GTTS H+YGP QGSFLNIELISEKT+ W
Sbjct: 582 DVVTNVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTSAYW 622
>gi|390362443|ref|XP_001197282.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 958
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 126/168 (75%), Positives = 151/168 (89%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDD+KHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIK+FITSI+++NYYGA+K
Sbjct: 55 LDNNFDDVKHTTLSERAALREAARCLKCADAPCQKSCPTQLDIKAFITSIANRNYYGASK 114
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AIFSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK+M I QIR P
Sbjct: 115 AIFSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEIFKEMKIPQIRDP 174
Query: 138 D--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ D P+ +K+ALIGCGPAS+SCATFL+R+GY ++T++EK +
Sbjct: 175 TLPSHDDLPESYQSKVALIGCGPASISCATFLARLGYTNLTVFEKEEW 222
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 163 FLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
F + GY Y + D VTNVSPRIV+GTTS ++YGP QGSFLNIELISEKTA W
Sbjct: 564 FEAGWGYAVTKTYSLDK-DFVTNVSPRIVRGTTSGNVYGPGQGSFLNIELISEKTAAYW- 621
Query: 223 YYSNCKVLSNTRTEFLNK 240
CK+++ + +F ++
Sbjct: 622 ----CKIVTELKRDFPDR 635
>gi|391327117|ref|XP_003738053.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 1
[Metaseiulus occidentalis]
Length = 1032
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/167 (76%), Positives = 146/167 (87%), Gaps = 3/167 (1%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NFDDIKHTTLSERGALKEA+RCLKCADAPCQKSCPTQ+D+K FI+ I++KNYYGAA
Sbjct: 57 SLEKNFDDIKHTTLSERGALKEAARCLKCADAPCQKSCPTQLDVKHFISCIANKNYYGAA 116
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
K IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFAT++F+ M I Q P
Sbjct: 117 KQIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATDIFRKMKIPQTLP 176
Query: 137 PDAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P+ + P++ KIALIGCGPAS+SCATFL+R+GY DITI+EK Y
Sbjct: 177 PEIAGNLPESYKAKIALIGCGPASMSCATFLARLGYSDITIFEKREY 223
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D+VTNVSPRIV+GTTS H+YGP QGSFLNIELISEKT+ W
Sbjct: 582 DVVTNVSPRIVRGTTSGHVYGPGQGSFLNIELISEKTSAYW 622
>gi|115627904|ref|XP_781238.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 900
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 126/168 (75%), Positives = 151/168 (89%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDD+KHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIK+FITSI+++NYYGA+K
Sbjct: 55 LDNNFDDVKHTTLSERAALREAARCLKCADAPCQKSCPTQLDIKAFITSIANRNYYGASK 114
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AIFSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK+M I QIR P
Sbjct: 115 AIFSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEIFKEMKIPQIRDP 174
Query: 138 D--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ D P+ +K+ALIGCGPAS+SCATFL+R+GY ++T++EK +
Sbjct: 175 TLPSHDDLPESYQSKVALIGCGPASISCATFLARLGYTNLTVFEKEEW 222
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 163 FLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
F + GY Y + D VTNVSPRIV+GTTS ++YGP QGSFLNIELISEKTA W
Sbjct: 564 FEAGWGYAVTKTYSLDK-DFVTNVSPRIVRGTTSGNVYGPGQGSFLNIELISEKTAAYW- 621
Query: 223 YYSNCKVLSNTRTEFLNK 240
CK+++ + +F ++
Sbjct: 622 ----CKIVTELKRDFPDR 635
>gi|410924025|ref|XP_003975482.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Takifugu
rubripes]
Length = 1021
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/168 (77%), Positives = 146/168 (86%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTLSERGAL+EA RCLKC DAPCQKSCPT +DIKSFITSIS+KNYY AA+
Sbjct: 52 LENNFDDIKHTTLSERGALREALRCLKCVDAPCQKSCPTNLDIKSFITSISNKNYYAAAR 111
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTS+LC+GGCNLYA+EEGPINIGGLQQFATEVFK MGI+QIR P
Sbjct: 112 AILSDNPLGLTCGMVCPTSELCVGGCNLYASEEGPINIGGLQQFATEVFKKMGIAQIRSP 171
Query: 138 D--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
D + P+ T +ALIGCGPAS+SCA+FL R+GYD ITI+EK Y
Sbjct: 172 DLPPACEMPESYHTTLALIGCGPASISCASFLGRLGYDKITIFEKQNY 219
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +LYGP QGSFLNIELISEKTA W C+ ++ + F
Sbjct: 578 DLVTNVSPRIVRGTTSGNLYGPGQGSFLNIELISEKTAAYW-----CQSVAELKKSF 629
>gi|27806651|ref|NP_776466.1| dihydropyrimidine dehydrogenase [NADP(+)] [Bos taurus]
gi|2498309|sp|Q28007.1|DPYD_BOVIN RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|677951|gb|AAB40985.1| dihydropyrimidine dehydrogenase [Bos taurus]
Length = 1025
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 146/175 (83%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQ+ATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL+G GPAS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMPEAYSAKIALLGAGPASISCASFLARLGYNDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|327270715|ref|XP_003220134.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Anolis
carolinensis]
Length = 1036
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 146/177 (82%), Gaps = 7/177 (3%)
Query: 11 NVFTSCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITS 66
N SCS L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITS
Sbjct: 57 NADKSCSSCERLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITS 116
Query: 67 ISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
I++KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVF
Sbjct: 117 IANKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVF 176
Query: 127 KDMGISQIRPPDAKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ M I QIR P + P+ KIAL G GPAS+SCATFL+R+GY DITI+EK Y
Sbjct: 177 RAMNIPQIRNPSLPEEIPEAYHAKIALFGAGPASISCATFLARLGYSDITIFEKENY 233
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRI++GTTS +YGP QGSFLNIELISEKTA W CK ++ +T+F +K
Sbjct: 592 DIVTNVSPRIIRGTTSGPIYGPGQGSFLNIELISEKTAAYW-----CKSVTELKTDFPDK 646
>gi|426216018|ref|XP_004002266.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Ovis aries]
Length = 1025
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 146/175 (83%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQ+ATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL+G GPAS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMPEAYSAKIALLGAGPASISCASFLARLGYNDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|355745468|gb|EHH50093.1| hypothetical protein EGM_00862, partial [Macaca fascicularis]
Length = 762
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 35 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 94
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 95 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 154
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 155 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 209
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 568 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 619
>gi|291398457|ref|XP_002715523.1| PREDICTED: dihydropyrimidine dehydrogenase [Oryctolagus cuniculus]
Length = 1029
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 52 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 111
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 112 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMN 171
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 172 IPQIRNPSLPPPERMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 226
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 585 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 636
>gi|116268009|ref|NP_001070776.1| uncharacterized protein LOC768165 [Danio rerio]
gi|115528600|gb|AAI24688.1| Zgc:153505 [Danio rerio]
Length = 243
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 149/168 (88%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT ++IK+FITSI++KNYYGAA+
Sbjct: 55 LENNFDDIKHTTLSERGALREAVRCLKCADAPCQKSCPTNLNIKAFITSIANKNYYGAAR 114
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
AI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFAT+VFK MG+ QIR
Sbjct: 115 AILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATDVFKQMGVPQIRNP 174
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
PPD + +KIALIGCGPAS+SCA+FL+R+GYD+I+++EK +
Sbjct: 175 DLPPPDQMPESYHSKIALIGCGPASISCASFLARLGYDNISVFEKQRF 222
>gi|124297137|gb|AAI31778.1| Dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|558305|gb|AAA57474.1| dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|397474053|ref|XP_003808505.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Pan paniscus]
Length = 1025
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|260821394|ref|XP_002606018.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae]
gi|229291355|gb|EEN62028.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae]
Length = 1044
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 152/177 (85%), Gaps = 5/177 (2%)
Query: 9 GINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSIS 68
G N S +L NFDDIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIK+FI+SIS
Sbjct: 50 GCNSCGSANLTKNFDDIKHTTLSERGALREAARCLKCADAPCQKSCPTQLDIKTFISSIS 109
Query: 69 HKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD 128
KNYYG+AKAIFSDNPLGLTCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQQFATE F
Sbjct: 110 TKNYYGSAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLFASEEGPINIGGLQQFATETFMA 169
Query: 129 MGISQIRPPDAKV--DFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
M I QIR P + D P++ K+ALIGCGPAS+SCATFL+R+GY D+TI+E++ +
Sbjct: 170 MKIPQIRDPSLPLLDDLPESYQAKVALIGCGPASISCATFLARLGYTDLTIFERDNH 226
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIVKGTTS + YGP QGSFLNIELISEKTA W C+ ++ + +F +K
Sbjct: 586 DIVTNVSPRIVKGTTSGYHYGPGQGSFLNIELISEKTAAYW-----CQTVTELKRDFPDK 640
>gi|340374761|ref|XP_003385906.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Amphimedon
queenslandica]
Length = 1027
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/166 (77%), Positives = 147/166 (88%), Gaps = 5/166 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NNFDDIKHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIK FITSIS+KNYYGA+++I
Sbjct: 58 NNFDDIKHTTLSERAALREAARCLKCADAPCQKSCPTQLDIKGFITSISNKNYYGASRSI 117
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP-- 137
FSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATEVFK M + QIR P
Sbjct: 118 FSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEVFKKMRVPQIRDPSL 177
Query: 138 ---DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
D+ + +K+ALIGCGPAS+SCATFL+R+GY D+TI+EK Y
Sbjct: 178 PAVDSLPESYKSKVALIGCGPASISCATFLARLGYSDLTIFEKEKY 223
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D++TNVSPRIV+GTTS HL+GP Q ++LNIEL+SEKT W+ + + + +F NK
Sbjct: 583 DIITNVSPRIVRGTTSGHLFGPGQNAYLNIELVSEKTCAYWL-----QSIRELKRDFPNK 637
>gi|158255870|dbj|BAF83906.1| unnamed protein product [Homo sapiens]
Length = 1025
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|119943098|ref|NP_000101.2| dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 [Homo sapiens]
gi|160332325|sp|Q12882.2|DPYD_HUMAN RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil
dehydrogenase; Flags: Precursor
gi|693912|gb|AAB51366.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|6729338|dbj|BAA89789.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|119593409|gb|EAW73003.1| dihydropyrimidine dehydrogenase, isoform CRA_b [Homo sapiens]
Length = 1025
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|355558194|gb|EHH14974.1| hypothetical protein EGK_00997 [Macaca mulatta]
Length = 1025
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|109011616|ref|XP_001106007.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Macaca mulatta]
Length = 1025
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|395822002|ref|XP_003784315.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Otolemur
garnettii]
Length = 1014
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 37 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 96
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 97 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMN 156
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 157 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 211
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 570 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 621
>gi|124298016|gb|AAI31779.1| Dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|332809597|ref|XP_513583.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 3 [Pan
troglodytes]
gi|410212198|gb|JAA03318.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410260464|gb|JAA18198.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410297350|gb|JAA27275.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410355311|gb|JAA44259.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
Length = 1025
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEMLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|301608531|ref|XP_002933845.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Xenopus
(Silurana) tropicalis]
Length = 898
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/175 (77%), Positives = 147/175 (84%), Gaps = 9/175 (5%)
Query: 15 SCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
SCS L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 SCSKCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE+FK M
Sbjct: 108 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEIFKTMN 167
Query: 131 ISQIRPPD--AKVDFP---DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P A P TKIALIG GPAS+SCA+FL+R+GY DIT++EK Y
Sbjct: 168 IPQIRNPSLPATEAMPAQYKTKIALIGAGPASISCASFLARLGYSDITVFEKQKY 222
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP QGSFLNIELISEKTA W C+ ++ + +F
Sbjct: 454 DIVTNVSPRIIRGTTSGSIYGPGQGSFLNIELISEKTAAYW-----CQSITELKADF 505
>gi|359319777|ref|XP_537061.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Canis lupus
familiaris]
Length = 1143
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/168 (77%), Positives = 143/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 172 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 231
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I+QIR
Sbjct: 232 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNITQIRNP 291
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 292 SLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 339
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 698 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 749
>gi|363736857|ref|XP_426639.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Gallus gallus]
Length = 1025
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/175 (77%), Positives = 148/175 (84%), Gaps = 9/175 (5%)
Query: 15 SCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
SCS L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 SCSNCEKLENNFDDIKHTTLSERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMN 167
Query: 131 ISQIRPPD--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P + D P+ KIAL+G GPASLSCA+FL+R+GY +ITI+EK Y
Sbjct: 168 IPQIRNPSLPSPEDMPEAYHVKIALLGAGPASLSCASFLARLGYSNITIFEKQEY 222
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+G TS +YGP QGSFLNIELISEKTA W CK ++ +++F
Sbjct: 581 DIVTNVSPRIVRGVTSGPIYGPGQGSFLNIELISEKTAAYW-----CKSITELKSDF 632
>gi|296489272|tpg|DAA31385.1| TPA: dihydropyrimidine dehydrogenase [Bos taurus]
Length = 1025
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQ+ATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KI L+G GPAS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMPEAYSAKIVLLGAGPASISCASFLARLGYNDITIFEKQEY 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|154425763|gb|AAI51490.1| DPYD protein [Bos taurus]
Length = 452
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQ+ATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KI L+G GPAS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMPEAYSAKIVLLGAGPASISCASFLARLGYNDITIFEKQEY 222
>gi|344293562|ref|XP_003418491.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Loxodonta
africana]
Length = 1052
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 75 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 134
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 135 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMN 194
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 195 IPQIRNPSLPPPEKMPEAYSAKIALFGGGPASISCASFLARLGYSDITIFEKQEY 249
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + EF
Sbjct: 608 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKAEF 659
>gi|66354366|gb|AAY44826.1| suppressor-of-rudimentary dihydropyrimidine dehydrogenase mutant
[Drosophila melanogaster]
Length = 1031
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/164 (77%), Positives = 146/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G PASLSCATFL+R+GY D+TIYE+ +Y
Sbjct: 176 PQAEANPLSQKIALVGGEPASLSCATFLARLGYRDVTIYERRSY 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|410967804|ref|XP_003990405.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Felis catus]
Length = 1023
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/168 (77%), Positives = 143/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 52 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 111
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I+QIR
Sbjct: 112 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKTMNITQIRDP 171
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 172 SLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 219
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 578 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 629
>gi|296208611|ref|XP_002751145.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Callithrix
jacchus]
Length = 974
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F +L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCENLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+A EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLHATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVNELKADF 632
>gi|197100733|ref|NP_001126169.1| dihydropyrimidine dehydrogenase [NADP(+)] [Pongo abelii]
gi|75041534|sp|Q5R895.1|DPYD_PONAB RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|55730588|emb|CAH92015.1| hypothetical protein [Pongo abelii]
Length = 1025
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPT DLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTPDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPFLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|326925020|ref|XP_003208720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Meleagris
gallopavo]
Length = 1214
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 149/179 (83%), Gaps = 9/179 (5%)
Query: 11 NVFTSCS----LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITS 66
N SCS L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIKSFITS
Sbjct: 272 NSDKSCSNCEKLENNFDDIKHTTLSERGALREAMRCLKCADAPCQKSCPTNLDIKSFITS 331
Query: 67 ISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
I++KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVF
Sbjct: 332 IANKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVF 391
Query: 127 KDMGISQIRPPD--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
K M I QIR P + D P+ KIAL+G GPASLSCA+FL+R+GY +ITI+EK Y
Sbjct: 392 KAMNIPQIRNPSLPSPEDMPEAYHVKIALLGAGPASLSCASFLARLGYSNITIFEKQEY 450
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+G TS +YGP QGSFLNIELISEKTA W CK ++ +++F
Sbjct: 807 DIVTNVSPRIVRGITSGPIYGPGQGSFLNIELISEKTAAYW-----CKSITELKSDF 858
>gi|403283991|ref|XP_003933373.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Saimiri
boliviensis boliviensis]
Length = 1204
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F +L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 223 NCFNCENLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 282
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+A EEGPINIGGLQQFATEVFK M
Sbjct: 283 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLHATEEGPINIGGLQQFATEVFKAMS 342
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 343 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 397
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 756 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVNELKADF 807
>gi|301758641|ref|XP_002915175.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Ailuropoda
melanoleuca]
Length = 1026
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/168 (76%), Positives = 143/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAA+
Sbjct: 55 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAR 114
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I+QIR
Sbjct: 115 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNITQIRNP 174
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 175 SLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|281349697|gb|EFB25281.1| hypothetical protein PANDA_003122 [Ailuropoda melanoleuca]
Length = 1009
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 129/168 (76%), Positives = 143/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAA+
Sbjct: 42 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAR 101
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I+QIR
Sbjct: 102 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNITQIRNP 161
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 162 SLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 209
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 568 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 619
>gi|344243267|gb|EGV99370.1| Dihydropyrimidine dehydrogenase [NADP+] [Cricetulus griseus]
Length = 519
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 37 NCFACEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 96
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+AAEEGPINIGGLQQFATEVFK M
Sbjct: 97 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHAAEEGPINIGGLQQFATEVFKAMN 156
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY +ITI+EK Y
Sbjct: 157 IPQIRSPSLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSNITIFEKQEY 211
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 176 EKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRT 235
K D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C ++ +
Sbjct: 456 HKYIQDIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CHSITELKA 510
Query: 236 EF 237
+F
Sbjct: 511 DF 512
>gi|320166820|gb|EFW43719.1| dihydropyrimidine dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 1056
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 148/169 (87%), Gaps = 5/169 (2%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NNFDDIKHTTLSER AL+EASRCLKCADAPCQKSCPTQ+D+KSFI SIS+KNYYGAA
Sbjct: 85 NLENNFDDIKHTTLSERAALREASRCLKCADAPCQKSCPTQLDVKSFIGSISNKNYYGAA 144
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGM+CPTSDLC+GGCNL A+EEG INIGGLQQFATEVFK MG+ QIR
Sbjct: 145 KAIFSDNPLGLTCGMICPTSDLCVGGCNLAASEEGAINIGGLQQFATEVFKTMGVRQIRD 204
Query: 137 PDAK--VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A P++ KIALIGCGPAS+SCATFL+R+GY ++T++EK +
Sbjct: 205 PSATPVSQLPESFRAKIALIGCGPASVSCATFLARLGYTNLTVFEKEKF 253
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D VTNVSPRIV+GTTS H +GP QG+FLNIELISEK+A W
Sbjct: 616 DCVTNVSPRIVRGTTSGHSFGPGQGAFLNIELISEKSAAYW 656
>gi|354495028|ref|XP_003509634.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+], partial
[Cricetulus griseus]
Length = 655
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 69 NCFACEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 128
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+AAEEGPINIGGLQQFATEVFK M
Sbjct: 129 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHAAEEGPINIGGLQQFATEVFKAMN 188
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY +ITI+EK Y
Sbjct: 189 IPQIRSPSLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSNITIFEKQEY 243
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C ++ + +F
Sbjct: 601 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CHSITELKADF 652
>gi|25140985|ref|NP_740748.1| dihydropyrimidine dehydrogenase [NADP(+)] [Mus musculus]
gi|81878130|sp|Q8CHR6.1|DPYD_MOUSE RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|24980778|gb|AAH39699.1| Dihydropyrimidine dehydrogenase [Mus musculus]
gi|148680406|gb|EDL12353.1| dihydropyrimidine dehydrogenase [Mus musculus]
Length = 1025
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 146/175 (83%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N FT L +NFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFTCEKLESNFDDIKHTTLGERGALREAVRCLKCADAPCQKSCPTSLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+AAEEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHAAEEGPINIGGLQQFATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY +ITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSNITIFEKQEY 222
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W C ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYW-----CHSVTELKADF 632
>gi|194211086|ref|XP_001490668.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Equus caballus]
Length = 1080
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 103 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 162
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYG+AK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQF+TEVFK M
Sbjct: 163 NYYGSAKTIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFSTEVFKAMN 222
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 223 IPQIRNPSLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 277
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++G TS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 636 DIVTNVSPRIIRGITSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 687
>gi|195058500|ref|XP_001995454.1| GH17755 [Drosophila grimshawi]
gi|193896240|gb|EDV95106.1| GH17755 [Drosophila grimshawi]
Length = 1033
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/165 (78%), Positives = 146/165 (88%), Gaps = 1/165 (0%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NNF+DIKHTTLSERGAL+E++RCLKCADAPCQKSCPTQ+DIKSFITSI++KNYYGAA
Sbjct: 56 TLSNNFEDIKHTTLSERGALEESARCLKCADAPCQKSCPTQLDIKSFITSIANKNYYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATE FK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEIGPINIGGLQQFATEAFKKMGVHQRRS 175
Query: 137 PDAK-VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P K + P KIAL+G GPASLSCAT+L R+GY+DITIYE+ Y
Sbjct: 176 PALKPLAQPAKKIALLGGGPASLSCATYLGRLGYNDITIYERRRY 220
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
DMVTNVSPRIV+GTTS + YGP+Q FLNIELISEK A W+
Sbjct: 577 DMVTNVSPRIVRGTTSGYRYGPQQNCFLNIELISEKLAEYWL 618
>gi|432915661|ref|XP_004079198.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Oryzias
latipes]
Length = 1021
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/168 (75%), Positives = 146/168 (86%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIK+FITSI++KNYYGAA+
Sbjct: 52 LENNFDDIKHTTLSERGALREAYRCLKCADAPCQKSCPTNLDIKAFITSIANKNYYGAAR 111
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
I SDNPLGLTCGMVCPTS+LC+GGCNLYA+EEGPINIGGLQQFATEVF MGI QIR
Sbjct: 112 VILSDNPLGLTCGMVCPTSELCVGGCNLYASEEGPINIGGLQQFATEVFSQMGIPQIRSP 171
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
PP+ + + +A+IGCGPAS+SCA+FL+R+GYD+ITI+EK Y
Sbjct: 172 ELPPPNEMPESYHSPVAMIGCGPASISCASFLARLGYDNITIFEKQQY 219
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS LYGP GSFLNIELISEKTA W C+ ++ + +F
Sbjct: 578 DLVTNVSPRIVRGTTSGPLYGPGLGSFLNIELISEKTAAYW-----CQSVAELKKDF 629
>gi|13591940|ref|NP_112289.1| dihydropyrimidine dehydrogenase [NADP(+)] [Rattus norvegicus]
gi|81861573|sp|O89000.1|DPYD_RAT RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|3628593|dbj|BAA33218.1| dihydropyrimidine dehydrogenase [Rattus norvegicus]
Length = 1025
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFICEKLENNFDDIKHTTLGERGALREAVRCLKCADAPCQKSCPTSLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+A EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHATEEGPINIGGLQQFATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRSPLLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W C ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYW-----CHSVTELKADF 632
>gi|395535413|ref|XP_003769720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Sarcophilus
harrisii]
Length = 1025
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/168 (77%), Positives = 144/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 55 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 114
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
IFSDNPLGL+CGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATEVFK M I QIR P
Sbjct: 115 MIFSDNPLGLSCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEVFKAMNIPQIRNP 174
Query: 138 DAKV--DFP---DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ D P KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 175 SLPLPEDMPKAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ +S + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPVYGPGQSSFLNIELISEKTAAYW-----CQSISELKADF 632
>gi|242017470|ref|XP_002429211.1| Dihydropyrimidine dehydrogenase, putative [Pediculus humanus
corporis]
gi|212514100|gb|EEB16473.1| Dihydropyrimidine dehydrogenase, putative [Pediculus humanus
corporis]
Length = 1015
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/163 (77%), Positives = 144/163 (88%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L+NNF DIK TTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIK+FITSIS+KNYYGAAK
Sbjct: 56 LINNFGDIKKTTLSERGALREAARCLKCADAPCQKSCPTQLDIKTFITSISNKNYYGAAK 115
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNL A+EEGPINIGGLQQFA EVFK M ++Q+ PP
Sbjct: 116 AILSDNPLGLTCGMVCPTSDLCVGGCNLQASEEGPINIGGLQQFAVEVFKKMKLAQVIPP 175
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + KI L+GCGPAS+SCATFL+R+GY +ITIYEK Y
Sbjct: 176 ENRNIAYGHKIGLLGCGPASISCATFLARLGYKNITIYEKENY 218
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+ NVSPRIVKGTTS++ YGPEQGSFLNIE+ISEK+ W CK + + +F K
Sbjct: 577 DLGINVSPRIVKGTTSKNHYGPEQGSFLNIEIISEKSEKYW-----CKSIRELKRDFPTK 631
>gi|224057361|ref|XP_002188844.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Taeniopygia
guttata]
Length = 1162
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/168 (77%), Positives = 144/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 192 LENNFDDIKHTTLSERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 251
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I SDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I QIR P
Sbjct: 252 MILSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNIPQIRNP 311
Query: 138 D--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ D P+ KIAL+G GPASLSCA+FL+R+GY +ITI+EK Y
Sbjct: 312 SLPSLEDMPEAYQVKIALLGAGPASLSCASFLARLGYSNITIFEKQEY 359
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLN 239
D+VTNVSPRIV+GTTS LYGP QGSFLNIELISEKTA W CK ++ + +F N
Sbjct: 718 DIVTNVSPRIVRGTTSGPLYGPGQGSFLNIELISEKTAAYW-----CKSIAELKADFPN 771
>gi|449689599|ref|XP_004212081.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like, partial
[Hydra magnipapillata]
Length = 364
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 149/172 (86%), Gaps = 6/172 (3%)
Query: 15 SCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
SC+ L NF+DIKHTTLSER ALKEA+RCLKCADAPCQKSCPTQ+D+KSFITSIS+KNYY
Sbjct: 1 SCADLTKNFEDIKHTTLSERAALKEAARCLKCADAPCQKSCPTQLDVKSFITSISNKNYY 60
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GA+KAIFSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK M I Q
Sbjct: 61 GASKAIFSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEIFKKMRIPQ 120
Query: 134 IRPPDAK--VDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IR P P+ +KIAL+GCGPAS+SCATFL R+GY +ITI+EK +
Sbjct: 121 IRDPKLTPIEQLPESYKSKIALLGCGPASISCATFLGRLGYSNITIFEKEAF 172
>gi|417405617|gb|JAA49516.1| Putative dihydropyrimidine dehydrogenase [Desmodus rotundus]
Length = 1025
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFGCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGP+NIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPVNIGGLQQFATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + K+AL G GPAS+SCA+FL+R+GY DIT++EK Y
Sbjct: 168 IPQIRNPALPPPEEMPEAYSAKMALFGAGPASISCASFLARLGYSDITLFEKQEY 222
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS LYGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPLYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|156369958|ref|XP_001628240.1| predicted protein [Nematostella vectensis]
gi|156215211|gb|EDO36177.1| predicted protein [Nematostella vectensis]
Length = 1081
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/173 (75%), Positives = 150/173 (86%), Gaps = 7/173 (4%)
Query: 15 SCS--LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
SCS + NFDDIKHTTLSERGALKEA RCLKC DAPCQKSCPTQ+DIK FI+ I++KN+
Sbjct: 49 SCSEAFIKNFDDIKHTTLSERGALKEAGRCLKCVDAPCQKSCPTQLDIKYFISCIANKNF 108
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAKAIFSDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATE+FK+M +
Sbjct: 109 YGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEIFKNMKLP 168
Query: 133 QIRPPD-AKVD-FPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QIR PD VD P+ +KIALIGCGPAS+SCATFL R+GY ++TI+EK +
Sbjct: 169 QIRDPDLTPVDQLPESYKSKIALIGCGPASISCATFLGRLGYTNLTIFEKEKF 221
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS HLYGP QGSFLNIELISEKT+ W C+ ++ + +F +K
Sbjct: 581 DIVTNVSPRIVRGTTSGHLYGPGQGSFLNIELISEKTSAYW-----CRSITELKKDFPDK 635
>gi|332221979|ref|XP_003260142.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 1
[Nomascus leucogenys]
Length = 1025
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPTPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|348586489|ref|XP_003479001.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Cavia
porcellus]
Length = 1019
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F +L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 42 NCFNCGNLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 101
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFA EVFK M
Sbjct: 102 NYYGAAKKIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFAAEVFKRMN 161
Query: 131 ISQIR----PPDAKV-DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP K+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 162 IPQIRNPSLPPAEKMPEAYSAKIALFGSGPASISCASFLARLGYSDITIFEKQEY 216
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++G TS LYGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 575 DIVTNVSPRIIRGITSGPLYGPGQSSFLNIELISEKTAAYW-----CQSVAELKADF 626
>gi|194769374|ref|XP_001966779.1| GF19101 [Drosophila ananassae]
gi|190618300|gb|EDV33824.1| GF19101 [Drosophila ananassae]
Length = 1034
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 144/164 (87%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSER AL+EA RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERAALEEAGRCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKQMGVHQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P+A+ + KIAL+G GPA LSCATFL+R+GY D+TI+E+ Y
Sbjct: 176 PEAEANPLGQKIALLGGGPAGLSCATFLARLGYRDVTIFEQRKY 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
>gi|431896404|gb|ELK05816.1| Dihydropyrimidine dehydrogenase [NADP+] [Pteropus alecto]
Length = 687
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 143/175 (81%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 87 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 146
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGL+CGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFA EVFK M
Sbjct: 147 NYYGAAKMIFSDNPLGLSCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFAAEVFKAMN 206
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QI+ PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 207 IPQIKNPSLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 261
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 620 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 671
>gi|334324361|ref|XP_001381838.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Monodelphis
domestica]
Length = 1051
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/168 (76%), Positives = 143/168 (85%), Gaps = 5/168 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 81 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 140
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
IFSDNPLGL+CGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I Q+R P
Sbjct: 141 MIFSDNPLGLSCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNIPQVRNP 200
Query: 138 DAKV--DFP---DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ D P KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 201 SLPLPEDMPTAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 248
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++G TS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 607 DIVTNVSPRIIRGITSGPVYGPGQSSFLNIELISEKTAAYW-----CQCVTELKADF 658
>gi|195446906|ref|XP_002070975.1| GK25544 [Drosophila willistoni]
gi|194167060|gb|EDW81961.1| GK25544 [Drosophila willistoni]
Length = 1033
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 145/164 (88%), Gaps = 2/164 (1%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NNF+DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 SLTNNFEDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQ+ATEVFK MG+ Q
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQYATEVFKQMGVHQRLQ 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P K + KIAL+G GPASLSCATFL R+GY +ITIYE+ +Y
Sbjct: 176 PHVKPI--EKKIALLGGGPASLSCATFLGRLGYTNITIYERRSY 217
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 574 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 615
>gi|198471457|ref|XP_001355634.2| GA15293 [Drosophila pseudoobscura pseudoobscura]
gi|198145925|gb|EAL32693.2| GA15293 [Drosophila pseudoobscura pseudoobscura]
Length = 1027
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/164 (79%), Positives = 145/164 (88%), Gaps = 2/164 (1%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NNF+DIKHTTLSER AL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 SLSNNFEDIKHTTLSERAALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATE+FK MGI Q
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEMFKQMGIRQRLS 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P AK KIAL+G GPASLSCATFL+R+GY DITIYE+ +Y
Sbjct: 176 PQAKP--LGKKIALLGGGPASLSCATFLARLGYGDITIYERRSY 217
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 574 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 615
>gi|13399651|pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399652|pdb|1H7X|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399653|pdb|1H7X|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399654|pdb|1H7X|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
Length = 1025
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFHCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEG INIGGLQQFA+EVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMN 167
Query: 131 ISQIRPP--DAKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P ++ P+ KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|13399647|pdb|1H7W|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399648|pdb|1H7W|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399649|pdb|1H7W|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399650|pdb|1H7W|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|20663633|pdb|1GT8|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663634|pdb|1GT8|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663635|pdb|1GT8|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663636|pdb|1GT8|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663641|pdb|1GTE|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663642|pdb|1GTE|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663643|pdb|1GTE|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663644|pdb|1GTE|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663675|pdb|1GTH|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663676|pdb|1GTH|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663677|pdb|1GTH|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663678|pdb|1GTH|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
Length = 1025
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 145/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFHCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEG INIGGLQQFA+EVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMN 167
Query: 131 ISQIRPP--DAKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P ++ P+ KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|91092056|ref|XP_970271.1| PREDICTED: similar to dihydropyrimidine dehydrogenase [Tribolium
castaneum]
gi|270004691|gb|EFA01139.1| hypothetical protein TcasGA2_TC010364 [Tribolium castaneum]
Length = 1016
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/166 (77%), Positives = 144/166 (86%), Gaps = 5/166 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIK TTLSERGALKEA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KNYYGAAK
Sbjct: 54 LENDFSDIKPTTLSERGALKEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNYYGAAK 113
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AIFSDNPLG+TCGMVCPTSDLC+GGCNL+A+EEGPINIGGLQ FATEVF MG+ QIR
Sbjct: 114 AIFSDNPLGITCGMVCPTSDLCVGGCNLHASEEGPINIGGLQHFATEVFSKMGVRQIR-- 171
Query: 138 DAKVDFP---DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
D K P + KI L+G GPASLSCATFL R+GYD+ITIYEK +
Sbjct: 172 DPKTPAPKNSNAKIVLMGAGPASLSCATFLGRLGYDNITIYEKQDF 217
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTT+ H YGP+QGSFLNIELISEK A W+ K + +T+F K
Sbjct: 572 DLVTNVSPRIVRGTTAGHNYGPQQGSFLNIELISEKCAAYWL-----KGIQELKTDFPTK 626
>gi|194500464|gb|ACF75488.1| dihydrogenpyrimidine dehydrogenase [Adineta vaga]
Length = 835
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/167 (77%), Positives = 145/167 (86%), Gaps = 4/167 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF D+KHTTLSERGAL+EASRCLKCADAPCQKSCPT IDIKSFITSIS+KNYYGAAK
Sbjct: 64 LNRNFLDVKHTTLSERGALREASRCLKCADAPCQKSCPTSIDIKSFITSISNKNYYGAAK 123
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFA ++FK M I IR P
Sbjct: 124 AILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFAVDIFKSMRIPAIRDP 183
Query: 138 ---DAKVDFP-DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ K++ +KIALIGCGPAS+SCATFL+R+GY D+TIYEK Y
Sbjct: 184 HEDETKLNEKYSSKIALIGCGPASISCATFLARLGYKDLTIYEKQDY 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D++TNVSPR+ +GTTS H+YGP QGSF+NIELISEKT W+
Sbjct: 590 DLITNVSPRMARGTTSGHIYGPGQGSFINIELISEKTCAYWL 631
>gi|351700457|gb|EHB03376.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Heterocephalus
glaber]
Length = 863
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 142/175 (81%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 37 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 96
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAA+ IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFA EV K M
Sbjct: 97 NYYGAARKIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFAAEVCKRMN 156
Query: 131 ISQIRPPD--AKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P K P+ KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 157 IPQIRNPSMPPKEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 211
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Query: 152 GCGPASLSCATFLSRMGYDD-----ITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGS 206
G A+ + +T + R ++D +T D+VTNVSPR+++GTTS +YGP Q S
Sbjct: 536 GLASATPATSTSMIRRAFEDGWGFALTKTFSLDKDIVTNVSPRVIRGTTSGPMYGPGQSS 595
Query: 207 FLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
FLNIELISEKTA W C+ ++ +T+F
Sbjct: 596 FLNIELISEKTAAYW-----CQSVTELKTDF 621
>gi|187936058|gb|ACD37553.1| dihydrogenpyrimidine dehydrogenase [Adineta vaga]
Length = 968
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 145/167 (86%), Gaps = 4/167 (2%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF D+KHTTLSERGAL+EASRCLKCADAPCQKSCPT IDIKSFITSIS+KNYYGAAK
Sbjct: 64 LNRNFLDVKHTTLSERGALREASRCLKCADAPCQKSCPTSIDIKSFITSISNKNYYGAAK 123
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFA ++FK M I IR P
Sbjct: 124 AILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFAVDIFKSMRIPAIRDP 183
Query: 138 ---DAKVDFP-DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ K++ +KIALIGCGPAS+SCATFL+R+GY D+T+YEK Y
Sbjct: 184 HEDETKLNEKYSSKIALIGCGPASISCATFLARLGYKDLTVYEKQDY 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D++TNVSPR+ +GTTS H+YGP QGSF+NIELISEKT W+
Sbjct: 590 DLITNVSPRMARGTTSGHIYGPGQGSFINIELISEKTCAYWL 631
>gi|47522904|ref|NP_999209.1| dihydropyrimidine dehydrogenase [NADP(+)] precursor [Sus scrofa]
gi|2498311|sp|Q28943.1|DPYD_PIG RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil
dehydrogenase; Flags: Precursor
gi|558307|gb|AAA57475.1| dihydropyrimidine dehydrogenase [Sus scrofa]
Length = 1025
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 144/175 (82%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNF DIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFHCEKLENNFGDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEG INIGGLQQFA+EVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMN 167
Query: 131 ISQIRPP--DAKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P ++ P+ KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
>gi|357623930|gb|EHJ74888.1| dihydropyrimidine dehydrogenase [Danaus plexippus]
Length = 1025
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 143/169 (84%), Gaps = 2/169 (1%)
Query: 14 TSC-SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TSC SL NFDDIKHTTLSERGALKEA+RCLKCADAPCQKSCPTQID+KSFITSI++KNY
Sbjct: 51 TSCPSLERNFDDIKHTTLSERGALKEAARCLKCADAPCQKSCPTQIDVKSFITSIANKNY 110
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAK I SDNPLGLTCGMVCPTSDLC+GGCNL+A+EEG INIGGLQ FA E F MGIS
Sbjct: 111 YGAAKEILSDNPLGLTCGMVCPTSDLCVGGCNLHASEEGAINIGGLQHFAVETFMKMGIS 170
Query: 133 QIRPPDAK-VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
Q P K + D KIALIG GPASLSCA FL+RMGY +IT++EK Y
Sbjct: 171 QTLDPKTKPLPRGDKKIALIGGGPASLSCACFLARMGYKNITVFEKEKY 219
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+G TS YGP QGSFLNIELISEK W C+ ++ + +F K
Sbjct: 575 DIVTNVSPRIVRGVTSGENYGPGQGSFLNIELISEKCEAYW-----CQSITELKRDFPTK 629
>gi|324501269|gb|ADY40567.1| Dihydropyrimidine dehydrogenase NADP+ [Ascaris suum]
Length = 1059
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/165 (74%), Positives = 142/165 (86%), Gaps = 3/165 (1%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
VN+F D+KHTTLSERGAL+EA RCLKCADAPCQKSCPTQ+D+KSFITSI++KNYYGAA+
Sbjct: 77 VNDFRDVKHTTLSERGALREALRCLKCADAPCQKSCPTQLDVKSFITSIANKNYYGAARQ 136
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
IFSDNPLGLTCGMVCPTSDLC+G CNLY +EEGPINIGGLQQFATEVFK M I QI +
Sbjct: 137 IFSDNPLGLTCGMVCPTSDLCVGSCNLYGSEEGPINIGGLQQFATEVFKKMNIRQIVSKE 196
Query: 139 AKVDFPDTK---IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ D+ IAL+GCGPAS+SCA+FL R+GY D+TIYEKN +
Sbjct: 197 VLMKRNDSHRQPIALLGCGPASISCASFLCRLGYTDVTIYEKNDF 241
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS HLYGP+QGSFLNIELISEKTA W+
Sbjct: 603 DLVTNVSPRIVRGTTSGHLYGPQQGSFLNIELISEKTAEYWL 644
>gi|194500492|gb|ACF75514.1| dihydrogenpyrimidine dehydrogenase [Philodina roseola]
Length = 299
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 142/168 (84%), Gaps = 4/168 (2%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NF D+KHTT SERGAL+EASRCLKCADAPCQKSCPT IDIKSFITSI++KNYYGAA
Sbjct: 63 NLNRNFLDVKHTTYSERGALREASRCLKCADAPCQKSCPTSIDIKSFITSIANKNYYGAA 122
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFA E+FK M I IR
Sbjct: 123 KAILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFAVEIFKAMHIPAIRD 182
Query: 137 PDAKVDFPDTK----IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P + + K IALIGCGPAS+SCATFL+R+GY ++TIYEK Y
Sbjct: 183 PSCNGEKLNEKYSSQIALIGCGPASISCATFLARLGYTNLTIYEKQDY 230
>gi|195438144|ref|XP_002066997.1| GK24771 [Drosophila willistoni]
gi|194163082|gb|EDW77983.1| GK24771 [Drosophila willistoni]
Length = 1045
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 123/165 (74%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL+NNF+D+K +TLSER ALKEA+RCLKCADAPCQK+CPTQIDI FI I+ KNYYGAA
Sbjct: 77 SLLNNFEDVKESTLSERAALKEAARCLKCADAPCQKACPTQIDIAHFIGCIASKNYYGAA 136
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC CNL+A EEGPINIGGLQQFAT VF+ MG+ Q+ P
Sbjct: 137 KAIFSDNPLGLTCGMVCPTSDLCQSSCNLHATEEGPINIGGLQQFATNVFRRMGVRQVVP 196
Query: 137 PDAK-VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P+AK + + KIAL+G GP SLSCATFL R+GY DITIYE+N Y
Sbjct: 197 PEAKNLKNANKKIALVGGGPTSLSCATFLGRLGYKDITIYEENEY 241
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 6/41 (14%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D VTNVSPRIV+G+T QGSF+NIEL+SEK A W
Sbjct: 605 DEVTNVSPRIVRGSTH------HQGSFMNIELVSEKKADYW 639
>gi|440793290|gb|ELR14477.1| hypothetical protein ACA1_192070 [Acanthamoeba castellanii str.
Neff]
Length = 1028
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/171 (71%), Positives = 139/171 (81%), Gaps = 4/171 (2%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
+ C L +F DIKHTTLSERGAL EA RCLKCADAPCQKSCPTQ+D+K+FI+SIS KNYY
Sbjct: 54 SGCDLKKDFSDIKHTTLSERGALWEADRCLKCADAPCQKSCPTQLDVKAFISSISTKNYY 113
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GAAK I SDNP+GLTCGMVCPTSDLC+GGCNL EEG INIGGLQQFA E+FK M I Q
Sbjct: 114 GAAKQILSDNPVGLTCGMVCPTSDLCVGGCNLAGTEEGAINIGGLQQFAVEMFKKMNIHQ 173
Query: 134 IRPPDAKVD-FPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IR P VD P+ TKIA IGCGPA++S ATFL+RMGY ++TI+EK +
Sbjct: 174 IRAPGLDVDALPESYRTKIAFIGCGPATISAATFLARMGYTNLTIFEKEAF 224
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTN+SPRIV+GTTS H +GP QG+FLNIELISEKT W+
Sbjct: 581 DLVTNISPRIVRGTTSGHRFGPNQGAFLNIELISEKTEAYWL 622
>gi|221272036|sp|A8XKG6.2|DPYD_CAEBR RecName: Full=Probable dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
Length = 1053
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/166 (73%), Positives = 141/166 (84%), Gaps = 3/166 (1%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTLSERGALKEA RCLKCADAPCQKSCPTQ+DIKSFITSIS+KNYYGAA+
Sbjct: 70 LKNDFRDIKHTTLSERGALKEAMRCLKCADAPCQKSCPTQLDIKSFITSISNKNYYGAAR 129
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A +VFK M + QI
Sbjct: 130 AILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVRQIVSK 189
Query: 138 DAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + + +IALIGCGPAS+SCA+FL+R+GY DITIYEK Y
Sbjct: 190 EVRENRNASHKEQIALIGCGPASISCASFLARLGYTDITIYEKRAY 235
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS LYGP QGSF+NIELISEK+ W+
Sbjct: 605 DLVTNVSPRIVRGSTSGPLYGPNQGSFMNIELISEKSCEYWL 646
>gi|268579437|ref|XP_002644701.1| C. briggsae CBR-DPYD-1 protein [Caenorhabditis briggsae]
Length = 1032
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/166 (73%), Positives = 141/166 (84%), Gaps = 3/166 (1%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTLSERGALKEA RCLKCADAPCQKSCPTQ+DIKSFITSIS+KNYYGAA+
Sbjct: 70 LKNDFRDIKHTTLSERGALKEAMRCLKCADAPCQKSCPTQLDIKSFITSISNKNYYGAAR 129
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
AI SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A +VFK M + QI
Sbjct: 130 AILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVRQIVSK 189
Query: 138 DAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + + +IALIGCGPAS+SCA+FL+R+GY DITIYEK Y
Sbjct: 190 EVRENRNASHKEQIALIGCGPASISCASFLARLGYTDITIYEKRAY 235
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS LYGP QGSF+NIELISEK+ W+
Sbjct: 595 DLVTNVSPRIVRGSTSGPLYGPNQGSFMNIELISEKSCEYWL 636
>gi|313232715|emb|CBY19385.1| unnamed protein product [Oikopleura dioica]
Length = 1278
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 157/220 (71%), Gaps = 24/220 (10%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF DIKHTTLSER AL+EA RCLKCADAPCQKSCPT +DIKSFI++IS+KN+YGAA+
Sbjct: 322 LYKNFGDIKHTTLSERAALREAGRCLKCADAPCQKSCPTSLDIKSFISAISNKNFYGAAQ 381
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
I SDNP+GLTCGMVCPTSDLCMGGCNLYAAEEGPINI GLQQ+A EVFK+M I R
Sbjct: 382 IILSDNPIGLTCGMVCPTSDLCMGGCNLYAAEEGPINISGLQQYACEVFKEMKIPASRDP 441
Query: 136 ----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------- 178
P D F + KIAL+GCGPAS+SCATFL+R GY DITIYE++
Sbjct: 442 ALPKPEDMPASF-NQKIALVGCGPASISCATFLARFGYSDITIYERDGNPGGLSASEIPQ 500
Query: 179 ---TYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISE 215
YD++ + +VK + YG E G L+++ + +
Sbjct: 501 YRLPYDVI-DWETNLVKDLGVKVEYGRELGRNLSVQQLRD 539
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 180 YDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
+D+VTNV+PRI +GTTS H YGP GSF+NIELISEK+A W
Sbjct: 828 HDLVTNVAPRITRGTTSGHQYGPGLGSFINIELISEKSAEYW 869
>gi|313213960|emb|CBY40764.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 157/220 (71%), Gaps = 24/220 (10%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF DIKHTTLSER AL+EA RCLKCADAPCQKSCPT +DIKSFI++IS+KN+YGAA+
Sbjct: 74 LYKNFGDIKHTTLSERAALREAGRCLKCADAPCQKSCPTSLDIKSFISAISNKNFYGAAQ 133
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
I SDNP+GLTCGMVCPTSDLCMGGCNLYAAEEGPINI GLQQ+A EVFK+M I R
Sbjct: 134 IILSDNPIGLTCGMVCPTSDLCMGGCNLYAAEEGPINISGLQQYACEVFKEMKIPASRDP 193
Query: 136 ----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------- 178
P D F + KIAL+GCGPAS+SCATFL+R GY DITIYE++
Sbjct: 194 ALPKPEDMPASF-NQKIALVGCGPASISCATFLARFGYSDITIYERDGNPGGLSASEIPQ 252
Query: 179 ---TYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISE 215
YD++ + +VK + YG E G L+++ + +
Sbjct: 253 YRLPYDVI-DWETNLVKDLGVKVEYGRELGRNLSVQQLRD 291
>gi|71984108|ref|NP_508927.2| Protein DPYD-1 [Caenorhabditis elegans]
gi|97536128|sp|Q18164.2|DPYD_CAEEL RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|351058264|emb|CCD65682.1| Protein DPYD-1 [Caenorhabditis elegans]
Length = 1059
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 140/166 (84%), Gaps = 3/166 (1%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTLSERGALKEA RCLKCADAPCQKSCPTQ+D+KSFITSIS+KNYYGAA+
Sbjct: 70 LKNDFRDIKHTTLSERGALKEAMRCLKCADAPCQKSCPTQLDVKSFITSISNKNYYGAAR 129
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A +VFK M + QI
Sbjct: 130 QILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVRQIVSK 189
Query: 138 DAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + + ++ALIGCGPAS+SCA+FL+R+GY DITIYEK Y
Sbjct: 190 EVRENRNASHKEQVALIGCGPASISCASFLARLGYTDITIYEKRAY 235
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS LYGP QGSF+NIELISEK+ W+
Sbjct: 595 DLVTNVSPRIVRGSTSGPLYGPNQGSFMNIELISEKSCEYWL 636
>gi|66828195|ref|XP_647452.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum AX4]
gi|74859332|sp|Q55FT1.1|DPYD_DICDI RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|60475501|gb|EAL73436.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum AX4]
Length = 1009
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 137/170 (80%), Gaps = 5/170 (2%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
C L N+F+D+K TTL+ERGAL E++RCLKCADAPCQK CPTQ+DIKSFI+SIS KNYYGA
Sbjct: 52 CELKNDFEDVKPTTLTERGALFESARCLKCADAPCQKGCPTQLDIKSFISSISTKNYYGA 111
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
AK IFSDNPLGLTCGMVCP S LC GCNL A EEGPINIGGLQQFATEVFK M I QIR
Sbjct: 112 AKTIFSDNPLGLTCGMVCPVSSLCQYGCNLAATEEGPINIGGLQQFATEVFKKMNIPQIR 171
Query: 136 PPDAK--VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P P++ KIALIGCGP S+SCATFL R+GY D+TI+EK Y
Sbjct: 172 DPSLTPLSQLPESYKAKIALIGCGPTSISCATFLGRLGYTDVTIFEKEQY 221
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS H +GP QG+FLNIELISEKT + W CK + + +F ++
Sbjct: 579 DLVTNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCHYW-----CKAIGELKRDFPDR 633
>gi|341874167|gb|EGT30102.1| CBN-DPYD-1 protein [Caenorhabditis brenneri]
Length = 1060
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/166 (72%), Positives = 139/166 (83%), Gaps = 3/166 (1%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTLSERGALKEA RCLKCADAPCQKSCPTQ+DIKSFITSIS+KNYYGAA+
Sbjct: 71 LKNDFRDIKHTTLSERGALKEAMRCLKCADAPCQKSCPTQLDIKSFITSISNKNYYGAAR 130
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A +VFK M + QI
Sbjct: 131 QILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVRQIVSK 190
Query: 138 DAKVDF---PDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + +IALIGCGPAS+SCA+FL+R+GY DITIYEK Y
Sbjct: 191 EIRENRNVSHKEQIALIGCGPASISCASFLARLGYTDITIYEKRPY 236
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS L+GP QGSF+NIELISEK+ W+
Sbjct: 596 DLVTNVSPRIVRGSTSGPLFGPNQGSFMNIELISEKSCEYWL 637
>gi|328865277|gb|EGG13663.1| dihydropyrimidine dehydrogenase [Dictyostelium fasciculatum]
Length = 1016
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 162/231 (70%), Gaps = 22/231 (9%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
T+C L N+F D+K TTL+ERGAL E+SRCLKCADAPCQKSCPTQ+D+KSFI+SI+ KNYY
Sbjct: 53 TACDLKNDFSDVKPTTLTERGALFESSRCLKCADAPCQKSCPTQLDVKSFISSIATKNYY 112
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GAAKAIFSDNPLGLTCGMVCP S+LC GGCNL + EEG I IGGLQQFATE FK M ++Q
Sbjct: 113 GAAKAIFSDNPLGLTCGMVCPVSNLCEGGCNLASTEEGAIKIGGLQQFATEQFKKMNVAQ 172
Query: 134 IRPPD-AKVD-FPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKN---------- 178
IR P +D P++ KIAL+GCGP S+SCATFL+R+GY ++T++EK
Sbjct: 173 IRDPSLTPIDKLPESYLAKIALVGCGPTSISCATFLARLGYTNVTVFEKEQYSGGLSSSE 232
Query: 179 ------TYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
YD V + +++K + +YG G I+ + K + VY
Sbjct: 233 IPQYRLAYDAV-DFEVKLMKDLGVKVVYGKALGVDFTIDSLKSKDGFDAVY 282
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 153 CGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGSFLNIEL 212
C AS+ +F G+ + + D+VTNVSPRIV+GTTS H +GP QG+FLNIEL
Sbjct: 555 CTSASMIRRSFEQGWGFAVTKTFSLDK-DLVTNVSPRIVRGTTSGHHFGPGQGAFLNIEL 613
Query: 213 ISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
ISEKT + W CK ++ + +F K
Sbjct: 614 ISEKTCHYW-----CKSVTELKRDFPEK 636
>gi|33333732|gb|AAQ11981.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum]
Length = 1009
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 136/170 (80%), Gaps = 5/170 (2%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
C L N+F+D+K TTL+ RGAL E++RCLKCADAPCQK CPTQ+DIKSFI+SIS KNYYGA
Sbjct: 52 CELKNDFEDVKPTTLTGRGALFESARCLKCADAPCQKGCPTQLDIKSFISSISTKNYYGA 111
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
AK IFSDNPLGLTCGMVCP S LC GCNL A EEGPINIGGLQQFATEVFK M I QIR
Sbjct: 112 AKTIFSDNPLGLTCGMVCPVSSLCQYGCNLAATEEGPINIGGLQQFATEVFKKMNIPQIR 171
Query: 136 PPDAK--VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P P++ KIALIGCGP S+SCATFL R+GY D+TI+EK Y
Sbjct: 172 DPSLTPLSQLPESYKAKIALIGCGPTSISCATFLGRLGYTDVTIFEKEQY 221
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS H +GP QG+FLNIELISEKT + W CK + + +F ++
Sbjct: 579 DLVTNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCHYW-----CKAIGELKRDFPDR 633
>gi|281208037|gb|EFA82215.1| dihydropyrimidine dehydrogenase [Polysphondylium pallidum PN500]
Length = 1012
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 141/172 (81%), Gaps = 5/172 (2%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
T+C L N+F D+K TTL+ERGAL EA RCLKC DAPCQKSCPTQ+D+KSFI+SI+ KNYY
Sbjct: 53 TACELKNDFSDVKPTTLTERGALFEAQRCLKCVDAPCQKSCPTQLDVKSFISSIATKNYY 112
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GAAKAIFSDNPLGL+CGMVCP S+LC GGCNL + EEG I IGGLQQFAT+VFK M I Q
Sbjct: 113 GAAKAIFSDNPLGLSCGMVCPVSNLCEGGCNLASTEEGAIKIGGLQQFATDVFKKMNIPQ 172
Query: 134 IRPPD-AKVD-FPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IR P +D P++ +IAL+GCGP S+SCATFL+R+GY D+TI+EK Y
Sbjct: 173 IRDPSLTPIDQLPESYRARIALVGCGPTSISCATFLARLGYTDVTIFEKEQY 224
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D+VTNVSPRIV+GTTS H +GP QG+FLNIELISEKT + W CK ++ + +F +K
Sbjct: 580 DLVTNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCHYW-----CKAVTELKRDFPSK 634
>gi|358334609|dbj|GAA31156.2| dihydropyrimidine dehydrogenase (NADP+) [Clonorchis sinensis]
Length = 1060
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 136/175 (77%), Gaps = 5/175 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N T L+ +F DIK TTLSERGAL+EA+RCLKCADAPCQ SCPT ++IKSFITSI K
Sbjct: 64 NCATCRPLIADFSDIKPTTLSERGALREAARCLKCADAPCQHSCPTTLNIKSFITSIGKK 123
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK I SDNPLGLTCGMVCPTSDLC GGCNL A EEG INIGGLQQFA E+F MG
Sbjct: 124 NYYGAAKTILSDNPLGLTCGMVCPTSDLCAGGCNLAATEEGAINIGGLQQFAVEIFSQMG 183
Query: 131 ISQIRPPDAK-----VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ QI P+ + + DT IAL+GCGPAS+SCA+FL+R+GY I IYEK Y
Sbjct: 184 VPQILDPEIQRATKSLKAYDTPIALVGCGPASISCASFLARLGYRHIHIYEKEDY 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
D++TNVSPRIV+ S HLYGPEQ +FLNIELISEKT W C + + +F ++
Sbjct: 623 DLITNVSPRIVRSQVSGHLYGPEQAAFLNIELISEKTKDYW-----CASIKELKHDFPDR 677
>gi|355684845|gb|AER97535.1| dihydropyrimidine dehydrogenase [Mustela putorius furo]
Length = 191
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/150 (78%), Positives = 128/150 (85%), Gaps = 5/150 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 42 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 101
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-- 135
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I+QIR
Sbjct: 102 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNITQIRNP 161
Query: 136 ---PPDAKVDFPDTKIALIGCGPASLSCAT 162
PP+ + KIAL G GPAS+SCA+
Sbjct: 162 SLPPPEEMPEAYSAKIALFGAGPASISCAS 191
>gi|308511285|ref|XP_003117825.1| CRE-DPYD-1 protein [Caenorhabditis remanei]
gi|308238471|gb|EFO82423.1| CRE-DPYD-1 protein [Caenorhabditis remanei]
Length = 1074
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 140/181 (77%), Gaps = 18/181 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASR---------------CLKCADAPCQKSCPTQIDIKS 62
L N+F DIKHTTLSERGALKEA R CLKCADAPCQKSCPTQ+DIK+
Sbjct: 70 LKNDFRDIKHTTLSERGALKEAMRHVQKSHCFIFFVTVTCLKCADAPCQKSCPTQLDIKA 129
Query: 63 FITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFA 122
FITSIS+KNYYGAA+ I SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A
Sbjct: 130 FITSISNKNYYGAARQILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYA 189
Query: 123 TEVFKDMGISQIRPPDAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+VFK M + QI + + + + +IALIGCGPAS+SCA+FL+R+GY DITIYEK
Sbjct: 190 CDVFKQMNVRQIVSKEIRENRNASHKEQIALIGCGPASISCASFLARLGYTDITIYEKRA 249
Query: 180 Y 180
Y
Sbjct: 250 Y 250
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS +YGP QGSF+NIELISEK+ W+
Sbjct: 610 DLVTNVSPRIVRGSTSGPVYGPNQGSFMNIELISEKSTEYWL 651
>gi|440912381|gb|ELR61952.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Bos grunniens
mutus]
Length = 845
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 124/145 (85%), Gaps = 5/145 (3%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCLKCADAPCQKSCPT +DIKSFITSIS+KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+
Sbjct: 1 RCLKCADAPCQKSCPTNLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCV 60
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-----PPDAKVDFPDTKIALIGCGP 155
GGCNLYA EEGPINIGGLQQ+ATEVFK M I QIR PP+ + KIAL+G GP
Sbjct: 61 GGCNLYATEEGPINIGGLQQYATEVFKAMNIPQIRNPSLPPPEKMPEAYSAKIALLGAGP 120
Query: 156 ASLSCATFLSRMGYDDITIYEKNTY 180
AS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 121 ASISCASFLARLGYNDITIFEKQEY 145
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 504 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 555
>gi|290996101|ref|XP_002680621.1| dihydroorotate dehydrogenase family protein [Naegleria gruberi]
gi|284094242|gb|EFC47877.1| dihydroorotate dehydrogenase family protein [Naegleria gruberi]
Length = 1038
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 131/165 (79%), Gaps = 5/165 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
+F D KH+TL+E+ A+ EASRCLKCADAPCQ SCPT +DIKSFI+ IS NYYGAAK IF
Sbjct: 57 DFRDNKHSTLTEKSAIVEASRCLKCADAPCQSSCPTSLDIKSFISCISTGNYYGAAKMIF 116
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
SDNPLGL+CGMVCP S+LC G CNL A EEGPINI GLQ FAT+VF+ M + QIR PDA
Sbjct: 117 SDNPLGLSCGMVCPVSNLCAGSCNLAATEEGPININGLQAFATDVFRKMKLKQIRDPDAT 176
Query: 141 V--DFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P++ KIAL+G GPAS+SCATFL+RMGY ++TI+EK Y
Sbjct: 177 PLDKLPESYKAKIALVGAGPASISCATFLARMGYQNVTIFEKGQY 221
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQW 221
D+VTNVSPRI++G+ + + GP Q +F+NIELISEK+A W
Sbjct: 583 DLVTNVSPRIIRGSVTTN-RGPHQSAFMNIELISEKSATYW 622
>gi|432103875|gb|ELK30708.1| Dihydropyrimidine dehydrogenase [NADP+] [Myotis davidii]
Length = 313
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 121/144 (84%), Gaps = 5/144 (3%)
Query: 42 CLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMG 101
CLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+G
Sbjct: 6 CLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVG 65
Query: 102 GCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-----PPDAKVDFPDTKIALIGCGPA 156
GCNL A EEGPINIGGLQQFATEVFK M I QIR PP+ + KIAL+G GPA
Sbjct: 66 GCNLCATEEGPINIGGLQQFATEVFKAMNIPQIRDPSLPPPEEMPEAYSAKIALLGAGPA 125
Query: 157 SLSCATFLSRMGYDDITIYEKNTY 180
S+SCA+FL+R+GY D+TI+EK Y
Sbjct: 126 SISCASFLARLGYSDVTIFEKQEY 149
>gi|74143637|dbj|BAE28868.1| unnamed protein product [Mus musculus]
Length = 165
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/115 (86%), Positives = 106/115 (92%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N FT L +NFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFTCEKLESNFDDIKHTTLGERGALREAVRCLKCADAPCQKSCPTSLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV 125
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+AAEEGPINIGGLQQFATEV
Sbjct: 108 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHAAEEGPINIGGLQQFATEV 162
>gi|345306396|ref|XP_003428461.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Ornithorhynchus anatinus]
Length = 1675
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/107 (89%), Positives = 101/107 (94%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 11 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSIANKNYYGAAK 70
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE 124
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 71 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATE 117
>gi|426330462|ref|XP_004026230.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 1
[Gorilla gorilla gorilla]
gi|426330464|ref|XP_004026231.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 2
[Gorilla gorilla gorilla]
Length = 173
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/116 (84%), Positives = 103/116 (88%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATETL 163
>gi|332221981|ref|XP_003260143.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 2
[Nomascus leucogenys]
gi|332221983|ref|XP_003260144.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 3
[Nomascus leucogenys]
Length = 173
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/116 (84%), Positives = 103/116 (88%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATETL 163
>gi|30585379|gb|AAP36962.1| Homo sapiens dihydropyrimidine dehydrogenase [synthetic construct]
Length = 174
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/116 (84%), Positives = 103/116 (88%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATETL 163
>gi|237757300|ref|NP_001153773.1| dihydropyrimidine dehydrogenase [NADP(+)] isoform 2 [Homo sapiens]
gi|14249985|gb|AAH08379.1| DPYD protein [Homo sapiens]
gi|30582319|gb|AAP35386.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|39793956|gb|AAH64027.1| DPYD protein [Homo sapiens]
gi|119593408|gb|EAW73002.1| dihydropyrimidine dehydrogenase, isoform CRA_a [Homo sapiens]
Length = 173
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 98/116 (84%), Positives = 103/116 (88%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATETL 163
>gi|332809599|ref|XP_003308282.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 [Pan
troglodytes]
gi|332809601|ref|XP_003308283.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 2 [Pan
troglodytes]
Length = 173
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 98/116 (84%), Positives = 103/116 (88%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEMLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATETL 163
>gi|194387114|dbj|BAG59923.1| unnamed protein product [Homo sapiens]
Length = 156
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/108 (89%), Positives = 102/108 (94%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK
Sbjct: 18 LENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAK 77
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV 125
IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEV
Sbjct: 78 MIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEV 125
>gi|326679741|ref|XP_002666727.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Danio
rerio]
Length = 169
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/111 (84%), Positives = 105/111 (94%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT ++IK+FITSI++KNYYGAA+
Sbjct: 55 LENNFDDIKHTTLSERGALREAVRCLKCADAPCQKSCPTNLNIKAFITSIANKNYYGAAR 114
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD 128
AI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFAT+ F +
Sbjct: 115 AILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATDSFSE 165
>gi|322782528|gb|EFZ10477.1| hypothetical protein SINV_15621 [Solenopsis invicta]
Length = 112
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/109 (88%), Positives = 102/109 (93%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NFDDIKHTTLSERGALKEA+RCLKC DAPCQKSCPTQ+DIKSFITSIS+KNYYGAA
Sbjct: 4 SLTKNFDDIKHTTLSERGALKEAARCLKCVDAPCQKSCPTQLDIKSFITSISNKNYYGAA 63
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV 125
KAI SDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQ FA +V
Sbjct: 64 KAILSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQHFAVDV 112
>gi|80477256|gb|AAI08743.1| DPYD protein [Homo sapiens]
Length = 173
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 102/116 (87%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NYYGAAK IFSDNPLGLTCGMVC TSDLC+GGCNLYA EEGPINIGGLQQFATE
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCSTSDLCVGGCNLYATEEGPINIGGLQQFATETL 163
>gi|328706442|ref|XP_001944849.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Acyrthosiphon pisum]
Length = 1297
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 127/196 (64%), Gaps = 27/196 (13%)
Query: 8 AGINVFTSCSLVNNF-DDIKHTTL--SERGALKEASRCLKCADAPCQKSCPTQIDIKSFI 64
AG+ S L N + DIK +TL E+ A++EA RCLKCA APCQ SCPT ID+KSFI
Sbjct: 103 AGVVEGCSSGLWNKWWTDIKPSTLRGGEKAAVREARRCLKCAHAPCQLSCPTSIDVKSFI 162
Query: 65 TSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE 124
TSI+++NYYGAAK I SDNP+GL+CGMVCPTS+LC G CNL ++ GPINIGGLQQF E
Sbjct: 163 TSIANQNYYGAAKTILSDNPVGLSCGMVCPTSELCAGSCNLAGSDGGPINIGGLQQFCLE 222
Query: 125 VFKDMGISQIRPPD--------------------AKVDFPDTKIALIGCGPASLSCATFL 164
VF DM + PP A+ IA++G GPA L+CAT+L
Sbjct: 223 VFMDMAV----PPSAVSSDSDGDDDEEREDGQLKARGQSRLAPIAVVGAGPAGLTCATYL 278
Query: 165 SRMGYDDITIYEKNTY 180
+R+GY +T+YE Y
Sbjct: 279 NRLGYRRVTVYESGAY 294
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 17/59 (28%)
Query: 181 DMVTNVSPRIVK-----------------GTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV GT + +FLNIELISEKTA W+
Sbjct: 744 DLVTNVSPRIVGLGGHGVGVGSAASGIGPGTLGAGDSDVARNAFLNIELISEKTAAYWL 802
>gi|403358016|gb|EJY78643.1| Dihydroorotate dehydrogenase family protein [Oxytricha trifallax]
Length = 1033
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 119/166 (71%), Gaps = 6/166 (3%)
Query: 16 CSLVNNFD-DIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
CS +N++ DI T+ E A++EASRCLKC DAPCQ C T IDIKSFI +I +KN+YG
Sbjct: 89 CSKEDNWERDIPLMTIQE--AIREASRCLKCNDAPCQDGCSTTIDIKSFIYNIQNKNWYG 146
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
AAK I SDNPLGLTCG +CP S+LC CN+ +E+G I I LQ+ A +FK+MG+ Q+
Sbjct: 147 AAKVILSDNPLGLTCGQLCPISELCARNCNVSHSEQGAIKINRLQELAVRIFKEMGVKQV 206
Query: 135 RPPDAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEK 177
R P D P + IALIG GPASLSCA+FL RMGY+++ I+EK
Sbjct: 207 RDPSLPKDLPPSYKKPIALIGAGPASLSCASFLGRMGYENVHIFEK 252
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 181 DMVTNVSPRIVK-GTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLN 239
D V+NVSPRI K G L + SF NIELI+EKT WV CK L + +F N
Sbjct: 618 DAVSNVSPRIYKVGADPLKL----EPSFGNIELITEKTPEYWV--QGCKDL---KRDFPN 668
Query: 240 K 240
K
Sbjct: 669 K 669
>gi|340500564|gb|EGR27432.1| hypothetical protein IMG5_196150 [Ichthyophthirius multifiliis]
Length = 1020
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 120/168 (71%), Gaps = 7/168 (4%)
Query: 16 CSLVNNFD-DIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
C NN++ DI T+ E AL+EA RCLKC DAPCQK C T IDIK+FI +I +KN+YG
Sbjct: 77 CQKCNNWERDIPLMTIQE--ALREAIRCLKCNDAPCQKGCTTSIDIKTFIYNIQNKNWYG 134
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
AAK I SDNPLGLTCG +CP S+LC CN+ E+G I I LQ+ A +FK+MG+ QI
Sbjct: 135 AAKCILSDNPLGLTCGQLCPISELCARNCNVSHTEQGAIKINRLQELAVRIFKEMGVKQI 194
Query: 135 RPPDAKVDFP---DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ P + V+ P T IALIG GPASLSCATFL RMGY++I I+E+ +
Sbjct: 195 KDP-SLVNLPPSYKTPIALIGAGPASLSCATFLGRMGYENINIFERES 241
>gi|145500820|ref|XP_001436393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403532|emb|CAK68996.1| unnamed protein product [Paramecium tetraurelia]
Length = 997
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 132/208 (63%), Gaps = 21/208 (10%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA RCLKC DAPCQK C T IDIKSFI +I KN+YGAAK I +DNPLGL+CG +CP
Sbjct: 93 AIREAQRCLKCTDAPCQKGCSTSIDIKSFIYNIEKKNWYGAAKVILTDNPLGLSCGQLCP 152
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR----PPDAKVDFPDTKIAL 150
S+LC CN+ ++E+G I I LQ+FA +FK+M + QIR P + + F D+ IAL
Sbjct: 153 ISELCARNCNVASSEKGAIKINKLQEFAVSMFKEMNVKQIRDPKLPKNDHIVF-DSSIAL 211
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNTY-------DMVTNVSP--------RIVKGTT 195
IG G ASLSCATFL R+GY ++TI+EK+ + ++ N SP VK
Sbjct: 212 IGAGAASLSCATFLGRLGYKNVTIFEKSQHAGGLVVSEIPMNRSPVDDINWEIEQVKQLG 271
Query: 196 SRHLYGPEQGSFLNIELISEKTAYQWVY 223
+ ++G E G IE + K Y+ V+
Sbjct: 272 IKFVFGKELGKDFTIESL-RKEGYECVF 298
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D +TNVSPRI K TT P + NIELISEK+A W+
Sbjct: 593 DAITNVSPRIYKSTTDPLKQDP---GYANIELISEKSAKYWL 631
>gi|118377270|ref|XP_001021815.1| Dihydroorotate dehydrogenase family protein [Tetrahymena
thermophila]
gi|89303582|gb|EAS01570.1| Dihydroorotate dehydrogenase family protein [Tetrahymena
thermophila SB210]
Length = 1080
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 114/157 (72%), Gaps = 6/157 (3%)
Query: 24 DIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDN 83
DI T+ E A++EA+RCLKC DAPCQK C T IDIK+FI I +KN+YGAAK I SDN
Sbjct: 145 DIPLMTIQE--AVREANRCLKCNDAPCQKGCSTSIDIKTFIYCIQNKNWYGAAKCILSDN 202
Query: 84 PLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDF 143
PLGLTCG +CP S+LC CN+ E+G I I LQ+ A +FK+MG+ QIR P K +
Sbjct: 203 PLGLTCGQLCPISELCARNCNVSHTEQGAIKINRLQELAVRIFKEMGVKQIRDPTRK-NL 261
Query: 144 PDT---KIALIGCGPASLSCATFLSRMGYDDITIYEK 177
P++ IA+IG GPASLSCATFL RMGY+++ I+EK
Sbjct: 262 PNSYKAPIAIIGAGPASLSCATFLGRMGYENVHIFEK 298
>gi|402855350|ref|XP_003892289.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial
[Papio anubis]
Length = 776
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 94/116 (81%), Gaps = 5/116 (4%)
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDM 129
+NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 9 QNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAM 68
Query: 130 GISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 69 SIPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 124
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 483 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 534
>gi|449268103|gb|EMC78973.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Columba livia]
Length = 919
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 94/116 (81%), Gaps = 5/116 (4%)
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDM 129
+NYYGAAK I SDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 1 QNYYGAAKMILSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAM 60
Query: 130 GISQIRPPDAKV--DFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P D P+ KIAL+G GPASLSCA+FL+R+GY +ITI+EK Y
Sbjct: 61 NIPQIRNPSLPPLEDMPEAYHVKIALLGAGPASLSCASFLARLGYSNITIFEKQEY 116
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLN 239
D+VTNVSPRIV+G TS +YGP QGSFLNIELISEKTA W C+ ++ + +F N
Sbjct: 475 DIVTNVSPRIVRGITSGPIYGPGQGSFLNIELISEKTAAYW-----CRSIAELKADFPN 528
>gi|330795628|ref|XP_003285874.1| dihydropyrimidine dehydrogenase [Dictyostelium purpureum]
gi|325084179|gb|EGC37613.1| dihydropyrimidine dehydrogenase [Dictyostelium purpureum]
Length = 944
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
+K IFSDNPLGLTCGMVCP S LC GCNL A EEGPINIGGLQQFAT+VFK M I QIR
Sbjct: 47 SKTIFSDNPLGLTCGMVCPVSTLCQYGCNLAATEEGPINIGGLQQFATDVFKKMNIPQIR 106
Query: 136 PPD-AKVD-FPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P +D P++ KIALIGCGP S+SC TFL+R+GY D+TI+EK Y
Sbjct: 107 DPSLTPIDQLPESYKAKIALIGCGPTSISCGTFLARLGYSDVTIFEKEQY 156
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTN SPRIV+GTTS H +GP QG+FLNIELISEKT W CK ++ + +F
Sbjct: 514 DLVTNCSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCAYW-----CKAVTELKRDF 565
>gi|295706515|ref|YP_003599590.1| glutamate synthase [Bacillus megaterium DSM 319]
gi|294804174|gb|ADF41240.1| glutamate synthase (NADPH) [Bacillus megaterium DSM 319]
Length = 453
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 14/182 (7%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
S++ NF++++ LS R A++E++RCL C DAPC ++CPT IDI +FI I+ N G+A
Sbjct: 9 SIIQNFNEVEKG-LSNREAVEESNRCLYCYDAPCIQACPTGIDIPTFIKKIASGNLKGSA 67
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ I S NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I +
Sbjct: 68 ETIMSSNPVGASCARVCPTDELCEGACVLNHSTK-PIMIGDLQRYAT----DWAIQNEQV 122
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
K K+A++G GPA LS A L+R GY D+TI+E NTY +V+ P+
Sbjct: 123 LFEKGKANGKKVAIVGGGPAGLSAARELARFGY-DVTIFEAEKQAGGLNTYGIVSFRLPQ 181
Query: 190 IV 191
+
Sbjct: 182 AI 183
>gi|294501168|ref|YP_003564868.1| glutamate synthase (NADPH) [Bacillus megaterium QM B1551]
gi|294351105|gb|ADE71434.1| glutamate synthase (NADPH) [Bacillus megaterium QM B1551]
Length = 453
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 14/182 (7%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
S++ NF++++ LS R A++E++RCL C DAPC ++CPT IDI +FI I+ N G+A
Sbjct: 9 SIIQNFNEVEKG-LSNREAVEESNRCLYCYDAPCIQACPTGIDIPTFIKKIASGNLKGSA 67
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ I S NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I +
Sbjct: 68 ETIMSSNPVGASCSRVCPTDELCEGACVLNHSTK-PIMIGNLQRYAT----DWAIQNEQV 122
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
K K+A++G GPA LS A L+R GY D+TI+E NTY +V+ P+
Sbjct: 123 LFEKGRANGKKVAIVGGGPAGLSAARELARFGY-DVTIFEAEKQAGGLNTYGIVSFRLPQ 181
Query: 190 IV 191
+
Sbjct: 182 AI 183
>gi|375143821|ref|YP_005006262.1| glutamate synthase (NADPH) [Niastella koreensis GR20-10]
gi|361057867|gb|AEV96858.1| Glutamate synthase (NADPH) [Niastella koreensis GR20-10]
Length = 447
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N T+ NF DI S AL EA+RCL C DAPC KSCPT+I+I FI IS
Sbjct: 6 NRLTAEEYEQNFSDIHPPFDSRESALVEANRCLFCYDAPCTKSCPTEINIPKFIKQISTD 65
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKD 128
N G+A IF N +G C VCP LC G C EE PI I LQ++ATE + K
Sbjct: 66 NVKGSAHTIFVSNIMGAGCSRVCPVEKLCEGSCVYNLMEETPIPIARLQRYATEQALEKK 125
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ +P K K+A++G GPA LSCA LSR G D+TIYEK +
Sbjct: 126 WKLFDRKPSTGK------KVAVVGAGPAGLSCAHVLSREGV-DVTIYEKES 169
>gi|384044986|ref|YP_005493003.1| glutamate synthase small subunit [Bacillus megaterium WSH-002]
gi|345442677|gb|AEN87694.1| Glutamate synthase small subunit [Bacillus megaterium WSH-002]
Length = 453
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 14/182 (7%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
S++ NF++++ LS R A++E++RCL C DAPC ++CPT IDI +FI I+ N G+A
Sbjct: 9 SIIQNFNEVEKG-LSNREAVEESNRCLYCYDAPCIQACPTGIDIPTFIKKIASGNLKGSA 67
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ I S NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I +
Sbjct: 68 ETIMSSNPVGASCSRVCPTDELCEGACVLNHSTK-PIMIGDLQRYAT----DWAIQNEQV 122
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
K K+A++G GPA LS A L+R GY D+TI+E NTY +V+ P+
Sbjct: 123 LFEKGRANGKKVAIVGGGPAGLSAARELARFGY-DVTIFEAEKQAGGLNTYGIVSFRLPQ 181
Query: 190 IV 191
+
Sbjct: 182 AI 183
>gi|393199487|ref|YP_006461329.1| NADPH-dependent glutamate synthase beta chain [Solibacillus
silvestris StLB046]
gi|327438818|dbj|BAK15183.1| NADPH-dependent glutamate synthase beta chain [Solibacillus
silvestris StLB046]
Length = 445
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
S SL NF++I L+ A EA+RCL C D PC K+CPT I+I SFI I+ N G
Sbjct: 2 SNSLAKNFEEI-FGGLTTYAATVEANRCLYCYDPPCVKACPTSINIPSFIKKIASNNMKG 60
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
+A+ I NP+G +C VCPT +LC G C L +EE PI IG LQ++AT+ ++ ++
Sbjct: 61 SARVIMESNPVGASCARVCPTIELCEGACVL-NSEEKPIQIGHLQRYATDWLRESNVNLF 119
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
P A KIA+IG GPA LS A L+ +GY +TIYE +
Sbjct: 120 TPQPAN----GKKIAIIGSGPAGLSAARELALLGY-GVTIYEAD 158
>gi|406666659|ref|ZP_11074424.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Bacillus isronensis B3W22]
gi|405385429|gb|EKB44863.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Bacillus isronensis B3W22]
Length = 445
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
S SL NF++I L+ A EA+RCL C D PC K+CPT I+I SFI I+ N G
Sbjct: 2 SNSLAKNFEEI-FGGLTTYAATVEANRCLYCYDPPCVKACPTSINIPSFIKKIASNNMKG 60
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
+A+ I NP+G +C VCPT +LC G C L +EE PI IG LQ++AT+ ++ ++
Sbjct: 61 SARVIMESNPVGASCARVCPTIELCEGACVL-NSEEKPIQIGHLQRYATDWLRESNVNLF 119
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
P A K+A+IG GPA LS A L+ +GY +TIYE +
Sbjct: 120 TPQPAN----GKKVAIIGSGPAGLSAARELALLGY-GVTIYEAD 158
>gi|433544401|ref|ZP_20500786.1| dihydropyrimidine dehydrogenase subunit A [Brevibacillus agri
BAB-2500]
gi|432184329|gb|ELK41845.1| dihydropyrimidine dehydrogenase subunit A [Brevibacillus agri
BAB-2500]
Length = 448
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 18/181 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF ++ + L + A+ EA+RCL C DAPC K+CPT IDI SFI I+ N G+A+
Sbjct: 7 LQKNFSEVV-SALKPKEAIDEANRCLYCYDAPCIKACPTSIDIPSFIRKIATGNLLGSAR 65
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIR 135
I NP+G +C VCPT +LC G C L A + PI IG LQ+ AT+ + + + Q
Sbjct: 66 TIMESNPVGASCARVCPTEELCEGACVLNHASK-PIMIGLLQRHATDWAIRNNAALFQKG 124
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
P+ K ++A+IG GPA LS A L+R+GY ++TIYE NTY +V+ P
Sbjct: 125 DPNGK------RVAIIGAGPAGLSAARELARLGY-EVTIYEAKERAGGLNTYGIVSFRLP 177
Query: 189 R 189
+
Sbjct: 178 Q 178
>gi|399048942|ref|ZP_10740219.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Brevibacillus sp. CF112]
gi|29170608|gb|AAO66290.1| glutamate synthase small subunit protein [Brevibacillus agri]
gi|398053268|gb|EJL45467.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Brevibacillus sp. CF112]
Length = 448
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 18/181 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF ++ + L + A+ EA+RCL C DAPC K+CPT IDI SFI I+ N G+A+
Sbjct: 7 LQKNFSEVV-SALKPKEAIDEANRCLYCYDAPCIKACPTSIDIPSFIRKIATGNLLGSAR 65
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIR 135
I NP+G +C VCPT +LC G C L A + PI IG LQ+ AT+ + + + Q
Sbjct: 66 TIMESNPVGASCARVCPTEELCEGACVLNHASK-PIMIGLLQRHATDWAIRNNAALFQKG 124
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
P+ K ++A+IG GPA LS A L+R+GY ++TIYE NTY +V+ P
Sbjct: 125 DPNGK------RVAIIGAGPAGLSAARELARLGY-EVTIYEAKERAGGLNTYGIVSFRLP 177
Query: 189 R 189
+
Sbjct: 178 Q 178
>gi|149183200|ref|ZP_01861647.1| glutamate synthasemall subunit [Bacillus sp. SG-1]
gi|148849096|gb|EDL63299.1| glutamate synthasemall subunit [Bacillus sp. SG-1]
Length = 451
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 24/211 (11%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N + +L NF + H LS R A++EA+RCL C DAPC ++CPT IDI SFI I+
Sbjct: 3 NSLSLFNLEKNFQE-AHEGLSSREAVEEANRCLYCYDAPCIQACPTGIDIPSFIKKIASG 61
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--D 128
N G+AK I NP+G +C VCPT +LC G C L + + PI IG LQ++AT+ + +
Sbjct: 62 NLKGSAKTIMLSNPVGASCSRVCPTDELCEGACVLNHSTK-PIMIGDLQRYATDWARHNE 120
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYD 181
+ + P+ K + +IG GPA LS A L+R GY ++TIYE NTY
Sbjct: 121 EVLFEAGEPNGKT------VGIIGGGPAGLSAARELARFGY-EVTIYEAEKEAGGLNTYG 173
Query: 182 MVTNVSPRIVKGTTSRHLYGPEQGSFLNIEL 212
+V+ P+ V + +Q LN+E+
Sbjct: 174 IVSFRLPQSVS------FWEVDQVKKLNVEI 198
>gi|297566517|ref|YP_003685489.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Meiothermus silvanus DSM 9946]
gi|296850966|gb|ADH63981.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Meiothermus silvanus DSM 9946]
Length = 445
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 113/213 (53%), Gaps = 27/213 (12%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LSE A EA+RCL C DAPC +CPT IDI FI I+ N G+A+ I N +G TC
Sbjct: 20 LSEHEATVEANRCLYCYDAPCTHACPTHIDIPKFIKKIATGNLVGSARTILEANLMGATC 79
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP--PDAKVDFPDTK 147
VCP +LC G C L AEE PI IG LQ++AT+ GI +P P K K
Sbjct: 80 ARVCPVQELCEGACVLN-AEEKPIMIGRLQRYATDYVLVQGIDVFKPGTPTGK------K 132
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP--------RIVK 192
+A+IG GPA L+CA L+++G+ +T++EK +TY ++ P +VK
Sbjct: 133 VAVIGAGPAGLTCAGELAKLGH-SVTVFEKRELPGGLSTYGIIRLREPVEVALAEVEMVK 191
Query: 193 GTTSRHLYGPEQGSFLNIELISEKTAYQWVYYS 225
G E G+ L+ E I + Y V+ S
Sbjct: 192 RLGVEVRTGMELGANLSFEQI--RREYDAVFLS 222
>gi|291296269|ref|YP_003507667.1| FAD dependent oxidoreductase [Meiothermus ruber DSM 1279]
gi|290471228|gb|ADD28647.1| FAD dependent oxidoreductase [Meiothermus ruber DSM 1279]
Length = 440
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 10/155 (6%)
Query: 27 HTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLG 86
H L++ A+ EA+RCL C DAPC ++CPT IDI FI I+ N G+A+ I N +G
Sbjct: 12 HPPLTDHEAMVEANRCLYCFDAPCTQACPTHIDIPKFIKKIATGNLVGSARTILEANLMG 71
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP--PDAKVDFP 144
+C VCP +LC G C L AE PI IG LQ++AT+ + GI +P P K
Sbjct: 72 ASCARVCPVEELCEGACVL-GAEHRPIMIGRLQRYATDYVYERGIDVFKPGAPTGK---- 126
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
K+A+IG GPA L+CA L+++G+ +T++EK
Sbjct: 127 --KVAVIGAGPAGLTCAGELAKLGH-SVTVFEKRA 158
>gi|410454622|ref|ZP_11308546.1| dihydropyrimidine dehydrogenase subunit A [Bacillus bataviensis LMG
21833]
gi|409930552|gb|EKN67548.1| dihydropyrimidine dehydrogenase subunit A [Bacillus bataviensis LMG
21833]
Length = 456
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 20/203 (9%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L NF +++ L+ + A++E++RCL C DAPC K+CPT IDI +FI I+ N G+A
Sbjct: 13 ELEKNFLEVERG-LTNQEAIEESNRCLYCYDAPCIKACPTGIDIPTFIKKIASGNLLGSA 71
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
K I S NP+G +C VCPT +LC G C L + + PI IG LQ++AT+ + +P
Sbjct: 72 KTIMSSNPVGASCARVCPTEELCEGACVLNHSTK-PIMIGNLQRYATDWAIKNEQTLFQP 130
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
++ IA+IG GPA LS A L+R+GY D+TI+E NTY +V+ P+
Sbjct: 131 GESN----GKTIAVIGGGPAGLSAARELARLGY-DVTIFEASEKAGGLNTYGIVSFRLPQ 185
Query: 190 IVKGTTSRHLYGPEQGSFLNIEL 212
S + EQ LN+++
Sbjct: 186 ------SISFWEVEQVEKLNVKI 202
>gi|226312825|ref|YP_002772719.1| oxidoreductase [Brevibacillus brevis NBRC 100599]
gi|226095773|dbj|BAH44215.1| probable glutamate synthase small chain [Brevibacillus brevis NBRC
100599]
Length = 448
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 112/203 (55%), Gaps = 20/203 (9%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L NF ++ L A+ EA+RCL C DAPC K+CPT IDI SFI I+ N +G+A
Sbjct: 6 ELAKNFSEVV-PALKPMEAIHEANRCLYCYDAPCIKACPTSIDIPSFIKKIATGNLFGSA 64
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ I NP+G +C VCPT +LC G C L +A + PI IG LQ+ AT D I
Sbjct: 65 RTIMESNPVGASCARVCPTEELCEGACVLNSASK-PIMIGLLQRHAT----DWAIQNQAT 119
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
+K + ++A++G GPA LS A L+R+GY +T++E NTY +V+ P+
Sbjct: 120 LFSKGEANGKRVAIVGAGPAGLSAARELARLGY-AVTVFEAKEKAGGLNTYGIVSFRLPQ 178
Query: 190 IVKGTTSRHLYGPEQGSFLNIEL 212
+ L+ EQ L +E+
Sbjct: 179 EIS------LWEVEQVEALGVEI 195
>gi|373957953|ref|ZP_09617913.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mucilaginibacter paludis DSM 18603]
gi|373894553|gb|EHQ30450.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mucilaginibacter paludis DSM 18603]
Length = 447
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 91/167 (54%), Gaps = 5/167 (2%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T+ NF DI + AL EA+RC+ C DAPC KSCPT ID+ FI I+ +N
Sbjct: 8 LTTGQYEENFADIHPPFENLTAALVEANRCIFCYDAPCMKSCPTSIDVPKFIKQIATENI 67
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+A IFS N +G C VCP LC G C EE PI I LQ+F+TE I
Sbjct: 68 KGSAHTIFSSNIMGGGCSKVCPVEKLCEGACVYNLMEEEPIQIARLQRFSTE----KAIQ 123
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ P + ++A+IG GPA LSCA LSR G D+TIYEK
Sbjct: 124 EKWPLFTRKPSNGKRVAVIGAGPAGLSCAHVLSREGI-DVTIYEKEA 169
>gi|398818127|ref|ZP_10576725.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Brevibacillus sp. BC25]
gi|398028573|gb|EJL22080.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Brevibacillus sp. BC25]
Length = 448
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 20/203 (9%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L NF ++ L A+ EA+RCL C DAPC K+CPT IDI SFI I+ N +G+A
Sbjct: 6 ELAKNFAEVV-PALKPMEAINEANRCLYCYDAPCIKACPTSIDIPSFIKKIATGNLFGSA 64
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ I NP+G +C VCPT +LC G C L+++ + PI IG LQ+ AT D I
Sbjct: 65 RTIMESNPVGASCARVCPTEELCEGACVLHSSSK-PIMIGLLQRHAT----DWAIQNQAT 119
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
+K + ++A++G GPA LS A L+R+GY +T++E NTY +V+ P+
Sbjct: 120 LFSKGEANGKRVAVVGAGPAGLSAARELARLGY-AVTVFEAKEKAGGLNTYGIVSFRLPQ 178
Query: 190 IVKGTTSRHLYGPEQGSFLNIEL 212
+ L+ EQ L +E+
Sbjct: 179 EIS------LWEVEQVEALGVEI 195
>gi|300955832|ref|ZP_07168173.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
175-1]
gi|417290801|ref|ZP_12078082.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli B41]
gi|422772006|ref|ZP_16825695.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E482]
gi|300317299|gb|EFJ67083.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
175-1]
gi|323940785|gb|EGB36973.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E482]
gi|386253123|gb|EIJ02813.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli B41]
Length = 412
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + GI +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGIEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|123492280|ref|XP_001326030.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Trichomonas vaginalis G3]
gi|121908938|gb|EAY13807.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Trichomonas vaginalis G3]
Length = 532
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E +KEASRC+ C + PC CP +D++ ++ + S KN+Y A K + S NP+ L+ G
Sbjct: 41 TEDDIVKEASRCIFCYNPPCNTCCPANVDVREYVHAASVKNWYYAGKVVLSQNPMPLSTG 100
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
+C + C GGCNL + EGPI +QQFA F+++ I I PP K+A+
Sbjct: 101 ALCAIEETCAGGCNLNNSLEGPIKTSKIQQFALRKFRELKIKPICPPSN-----GKKVAI 155
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+G GPA +SC FL R+G+ +TI+E + +
Sbjct: 156 VGAGPAGISCGVFLRRLGF-PVTIFEADNF 184
>gi|293415429|ref|ZP_06658072.1| oxidoreductase yeiT [Escherichia coli B185]
gi|291433077|gb|EFF06056.1| oxidoreductase yeiT [Escherichia coli B185]
Length = 412
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T++ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDLEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|429067999|ref|ZP_19131483.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0672]
gi|427319689|gb|EKW81492.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0672]
Length = 412
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIHENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|89097590|ref|ZP_01170479.1| glutamate synthasemall subunit [Bacillus sp. NRRL B-14911]
gi|89087886|gb|EAR66998.1| glutamate synthasemall subunit [Bacillus sp. NRRL B-14911]
Length = 459
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 101/184 (54%), Gaps = 14/184 (7%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ L NF + + LS R A EASRCL C DAPC K+CPT IDI SFI IS N
Sbjct: 9 ISHTDLEQNFREAE-PALSSRDAAHEASRCLYCYDAPCIKACPTGIDIPSFIKKISSGNM 67
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+AK I NP+G +C VCPT +LC G C L + + PI IG LQ+ AT+ G
Sbjct: 68 LGSAKTIMDANPVGASCSRVCPTEELCEGACVLNSTKS-PILIGKLQRHATDWAIKSGKD 126
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTN 185
P A K A+IG GPA LS A L+R+GY+ + IYE NTY +V+
Sbjct: 127 LFFPGAAN----GKKAAVIGSGPAGLSAARELARLGYETV-IYEAEEEAGGLNTYGIVSF 181
Query: 186 VSPR 189
P+
Sbjct: 182 RLPK 185
>gi|312111478|ref|YP_003989794.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus sp. Y4.1MC1]
gi|311216579|gb|ADP75183.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus sp. Y4.1MC1]
Length = 451
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 18/181 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF ++ L++R A++EA+RCL C DAPC K+CPT IDI +FI I+ N G+AK
Sbjct: 8 LAKNFQEV-DPGLTDREAIEEANRCLYCYDAPCIKACPTGIDIPAFIKKIASGNLKGSAK 66
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIR 135
I S NP+G +C VCPT +LC G C L + + PI IG LQ++AT+ + + Q
Sbjct: 67 TIMSSNPVGASCARVCPTEELCEGACVLNHSTK-PIMIGKLQRYATDWAIRNKEVLFQAG 125
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+ K +A++G GPA LS A L+RMGY ITI+E NTY +V+ P
Sbjct: 126 QKNGKT------VAVVGGGPAGLSAARELARMGY-TITIFEAEKEAGGLNTYGIVSFRLP 178
Query: 189 R 189
+
Sbjct: 179 Q 179
>gi|423720428|ref|ZP_17694610.1| dihydropyrimidine dehydrogenase, subunit A [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366483|gb|EID43773.1| dihydropyrimidine dehydrogenase, subunit A [Geobacillus
thermoglucosidans TNO-09.020]
Length = 451
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 18/181 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF ++ L++R A++EA+RCL C DAPC K+CPT IDI +FI I+ N G+AK
Sbjct: 8 LAKNFQEV-DPGLTDREAIEEANRCLYCYDAPCIKACPTGIDIPAFIKKIASGNLKGSAK 66
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIR 135
I S NP+G +C VCPT +LC G C L + + PI IG LQ++AT+ + + Q
Sbjct: 67 TIMSSNPVGASCARVCPTEELCEGACVLNHSTK-PIMIGKLQRYATDWAIRNKEVLFQAG 125
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+ K +A++G GPA LS A L+RMGY ITI+E NTY +V+ P
Sbjct: 126 QKNGKT------VAVVGGGPAGLSAARELARMGY-TITIFEAEKEAGGLNTYGIVSFRLP 178
Query: 189 R 189
+
Sbjct: 179 Q 179
>gi|386713945|ref|YP_006180268.1| glutamate synthase small subunit [Halobacillus halophilus DSM 2266]
gi|384073501|emb|CCG44994.1| glutamate synthase small subunit [Halobacillus halophilus DSM 2266]
Length = 457
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 14/176 (7%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ H L+ + A++EA+RCL C DAPC K+CPT IDI FI I+ N G+A I
Sbjct: 17 NFEEV-HEGLNNQEAIEEANRCLYCYDAPCIKACPTSIDIPKFIKKIASGNLKGSATTIM 75
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S NP+G TC VCPT +LC G C L + + PI IG LQ+FAT+ +P +
Sbjct: 76 SSNPVGATCARVCPTEELCEGACVLNHSTQ-PILIGDLQRFATDWAIKNEQLLFKPGEKN 134
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
K+A++G GPA LS A L+R GY ++TI+E +TY +V+ P+
Sbjct: 135 ----GMKVAVVGGGPAGLSAARELARFGY-EVTIFEAEAEAGGLDTYGIVSFRLPQ 185
>gi|432534419|ref|ZP_19771395.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE234]
gi|431060646|gb|ELD69972.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE234]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|419115465|ref|ZP_13660484.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5A]
gi|377961260|gb|EHV24734.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5A]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A+ + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RASVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|301644163|ref|ZP_07244171.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
146-1]
gi|301077461|gb|EFK92267.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
146-1]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|442600048|ref|ZP_21017748.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441651101|emb|CCQ03238.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417182856|ref|ZP_12009413.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
93.0624]
gi|386184709|gb|EIH67448.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
93.0624]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|16130084|ref|NP_416651.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli str. K-12 substr. MG1655]
gi|170019537|ref|YP_001724491.1| putative oxidoreductase [Escherichia coli ATCC 8739]
gi|170081769|ref|YP_001731089.1| putative oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
gi|194436143|ref|ZP_03068245.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
101-1]
gi|238901328|ref|YP_002927124.1| putative oxidoreductase [Escherichia coli BW2952]
gi|251785515|ref|YP_002999819.1| NADH-dependent dihydropyrimidine dehydrogenase subunit, subunit of
NAD-dependent dihydropyrimidine dehydrogenase
[Escherichia coli BL21(DE3)]
gi|253772927|ref|YP_003035758.1| oxidoreductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162160|ref|YP_003045268.1| putative oxidoreductase [Escherichia coli B str. REL606]
gi|254288922|ref|YP_003054670.1| oxidoreductase [Escherichia coli BL21(DE3)]
gi|300930375|ref|ZP_07145784.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
187-1]
gi|301024364|ref|ZP_07188053.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
196-1]
gi|331642771|ref|ZP_08343906.1| putative oxidoreductase [Escherichia coli H736]
gi|386281217|ref|ZP_10058879.1| hypothetical protein ESBG_00479 [Escherichia sp. 4_1_40B]
gi|386595071|ref|YP_006091471.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Escherichia coli DH1]
gi|386614755|ref|YP_006134421.1| oxidoreductase YeiT [Escherichia coli UMNK88]
gi|386705408|ref|YP_006169255.1| putative oxidoreductase [Escherichia coli P12b]
gi|387621856|ref|YP_006129483.1| putative oxidoreductase [Escherichia coli DH1]
gi|388478195|ref|YP_490385.1| oxidoreductase [Escherichia coli str. K-12 substr. W3110]
gi|404375497|ref|ZP_10980681.1| hypothetical protein ESCG_04146 [Escherichia sp. 1_1_43]
gi|415778182|ref|ZP_11489228.1| uncharacterized oxidoreductase yeiT [Escherichia coli 3431]
gi|417259918|ref|ZP_12047441.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
2.3916]
gi|417276634|ref|ZP_12063961.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3.2303]
gi|417613608|ref|ZP_12264066.1| hypothetical protein ECSTECEH250_2666 [Escherichia coli STEC_EH250]
gi|417635072|ref|ZP_12285285.1| hypothetical protein ECSTECS1191_2992 [Escherichia coli STEC_S1191]
gi|417944617|ref|ZP_12587858.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli XH140A]
gi|417976940|ref|ZP_12617729.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli XH001]
gi|418303514|ref|ZP_12915308.1| uncharacterized oxidoreductase yeiT [Escherichia coli UMNF18]
gi|418957494|ref|ZP_13509418.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli J53]
gi|419143071|ref|ZP_13687811.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC6A]
gi|419149277|ref|ZP_13693930.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC6B]
gi|419154523|ref|ZP_13699086.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC6C]
gi|419159815|ref|ZP_13704320.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC6D]
gi|419164943|ref|ZP_13709400.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC6E]
gi|419809258|ref|ZP_14334144.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O32:H37
str. P4]
gi|419938798|ref|ZP_14455609.1| putative oxidoreductase [Escherichia coli 75]
gi|421775772|ref|ZP_16212380.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
AD30]
gi|422766755|ref|ZP_16820482.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E1520]
gi|422786766|ref|ZP_16839505.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H489]
gi|422790600|ref|ZP_16843304.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
TA007]
gi|422819677|ref|ZP_16867888.1| hypothetical protein ESMG_04200 [Escherichia coli M919]
gi|423704471|ref|ZP_17678896.1| hypothetical protein ESSG_03872 [Escherichia coli H730]
gi|425115555|ref|ZP_18517357.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.0566]
gi|425120282|ref|ZP_18521981.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.0569]
gi|425273313|ref|ZP_18664725.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli TW15901]
gi|425283854|ref|ZP_18674893.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli TW00353]
gi|432370321|ref|ZP_19613408.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE10]
gi|432417617|ref|ZP_19660222.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE44]
gi|432485953|ref|ZP_19727869.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE212]
gi|432564399|ref|ZP_19800982.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE51]
gi|432576424|ref|ZP_19812885.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE56]
gi|432627797|ref|ZP_19863774.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE77]
gi|432637392|ref|ZP_19873263.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE81]
gi|432661379|ref|ZP_19897025.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE111]
gi|432671218|ref|ZP_19906748.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE119]
gi|432685978|ref|ZP_19921276.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE156]
gi|432692119|ref|ZP_19927348.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE161]
gi|432704936|ref|ZP_19940038.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE171]
gi|432737660|ref|ZP_19972419.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE42]
gi|432875673|ref|ZP_20093946.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE154]
gi|432955603|ref|ZP_20147543.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE197]
gi|433048524|ref|ZP_20235878.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE120]
gi|433174068|ref|ZP_20358594.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE232]
gi|450245460|ref|ZP_21900640.1| putative oxidoreductase [Escherichia coli S17]
gi|20178190|sp|P76440.1|PRET_ECOLI RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase
sunbunit PreT; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|1788468|gb|AAC75207.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit N
[Escherichia coli str. K-12 substr. MG1655]
gi|85675260|dbj|BAE76623.1| predicted oxidoreductase [Escherichia coli str. K12 substr. W3110]
gi|169754465|gb|ACA77164.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Escherichia coli ATCC 8739]
gi|169889604|gb|ACB03311.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
gi|194424871|gb|EDX40856.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
101-1]
gi|238862744|gb|ACR64742.1| predicted oxidoreductase [Escherichia coli BW2952]
gi|242377788|emb|CAQ32551.1| NADH-dependent dihydropyrimidine dehydrogenase subunit, subunit of
NAD-dependent dihydropyrimidine dehydrogenase
[Escherichia coli BL21(DE3)]
gi|253323971|gb|ACT28573.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974061|gb|ACT39732.1| predicted oxidoreductase [Escherichia coli B str. REL606]
gi|253978229|gb|ACT43899.1| predicted oxidoreductase [Escherichia coli BL21(DE3)]
gi|260448760|gb|ACX39182.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Escherichia coli DH1]
gi|299880461|gb|EFI88672.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
196-1]
gi|300461697|gb|EFK25190.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
187-1]
gi|315136779|dbj|BAJ43938.1| putative oxidoreductase [Escherichia coli DH1]
gi|315615385|gb|EFU96017.1| uncharacterized oxidoreductase yeiT [Escherichia coli 3431]
gi|323936760|gb|EGB33045.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E1520]
gi|323961610|gb|EGB57216.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H489]
gi|323972972|gb|EGB68169.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
TA007]
gi|331039569|gb|EGI11789.1| putative oxidoreductase [Escherichia coli H736]
gi|332343924|gb|AEE57258.1| oxidoreductase YeiT [Escherichia coli UMNK88]
gi|339415612|gb|AEJ57284.1| uncharacterized oxidoreductase yeiT [Escherichia coli UMNF18]
gi|342363661|gb|EGU27767.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli XH140A]
gi|344193407|gb|EGV47488.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli XH001]
gi|345361802|gb|EGW93959.1| hypothetical protein ECSTECEH250_2666 [Escherichia coli STEC_EH250]
gi|345387355|gb|EGX17177.1| hypothetical protein ECSTECS1191_2992 [Escherichia coli STEC_S1191]
gi|359332493|dbj|BAL38940.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. MDS42]
gi|377992399|gb|EHV55546.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC6B]
gi|377994354|gb|EHV57481.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC6A]
gi|377997105|gb|EHV60212.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC6C]
gi|378007159|gb|EHV70128.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC6D]
gi|378011025|gb|EHV73970.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC6E]
gi|383103576|gb|AFG41085.1| putative oxidoreductase [Escherichia coli P12b]
gi|384380141|gb|EIE38008.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli J53]
gi|385158188|gb|EIF20178.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O32:H37
str. P4]
gi|385536779|gb|EIF83665.1| hypothetical protein ESMG_04200 [Escherichia coli M919]
gi|385706388|gb|EIG43429.1| hypothetical protein ESSG_03872 [Escherichia coli H730]
gi|386121356|gb|EIG69971.1| hypothetical protein ESBG_00479 [Escherichia sp. 4_1_40B]
gi|386226641|gb|EII48943.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
2.3916]
gi|386240569|gb|EII77492.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3.2303]
gi|388409333|gb|EIL69629.1| putative oxidoreductase [Escherichia coli 75]
gi|404290979|gb|EJZ47877.1| hypothetical protein ESCG_04146 [Escherichia sp. 1_1_43]
gi|408193095|gb|EKI18648.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli TW15901]
gi|408201544|gb|EKI26693.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli TW00353]
gi|408459241|gb|EKJ83024.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
AD30]
gi|408568235|gb|EKK44268.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.0566]
gi|408569324|gb|EKK45321.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.0569]
gi|430884987|gb|ELC07917.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE10]
gi|430939130|gb|ELC59347.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE44]
gi|431016350|gb|ELD29897.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE212]
gi|431093327|gb|ELD98993.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE51]
gi|431115343|gb|ELE18867.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE56]
gi|431163166|gb|ELE63602.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE77]
gi|431171287|gb|ELE71466.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE81]
gi|431200495|gb|ELE99221.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE111]
gi|431210533|gb|ELF08588.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE119]
gi|431222151|gb|ELF19442.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE156]
gi|431226913|gb|ELF24063.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE161]
gi|431243165|gb|ELF37554.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE171]
gi|431282553|gb|ELF73433.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE42]
gi|431420619|gb|ELH02903.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE154]
gi|431468274|gb|ELH48280.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE197]
gi|431564667|gb|ELI37836.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE120]
gi|431692156|gb|ELJ57595.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE232]
gi|449320350|gb|EMD10383.1| putative oxidoreductase [Escherichia coli S17]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417828532|ref|ZP_12475085.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Shigella
flexneri J1713]
gi|420321019|ref|ZP_14822849.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri 2850-71]
gi|335574908|gb|EGM61220.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Shigella
flexneri J1713]
gi|391248312|gb|EIQ07554.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri 2850-71]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|114796502|emb|CAL18239.1| glutamate synthase small subunit [Halobacillus halophilus DSM 2266]
Length = 444
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 14/176 (7%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ H L+ + A++EA+RCL C DAPC K+CPT IDI FI I+ N G+A I
Sbjct: 4 NFEEV-HEGLNNQEAIEEANRCLYCYDAPCIKACPTSIDIPKFIKKIASGNLKGSATTIM 62
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S NP+G TC VCPT +LC G C L + + PI IG LQ+FAT+ +P +
Sbjct: 63 SSNPVGATCARVCPTEELCEGACVLNHSTQ-PILIGDLQRFATDWAIKNEQLLFKPGEKN 121
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
K+A++G GPA LS A L+R GY ++TI+E +TY +V+ P+
Sbjct: 122 ----GMKVAVVGGGPAGLSAARELARFGY-EVTIFEAEAEAGGLDTYGIVSFRLPQ 172
>gi|193062361|ref|ZP_03043456.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli E22]
gi|194427119|ref|ZP_03059670.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
B171]
gi|260844752|ref|YP_003222530.1| oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|415798022|ref|ZP_11498333.1| hypothetical protein ECE128010_2019 [Escherichia coli E128010]
gi|417176536|ref|ZP_12006332.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3.2608]
gi|417253866|ref|ZP_12045622.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
4.0967]
gi|417624038|ref|ZP_12274337.1| hypothetical protein ECSTECH18_2792 [Escherichia coli STEC_H.1.8]
gi|419290088|ref|ZP_13832180.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC11A]
gi|419295416|ref|ZP_13837462.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC11B]
gi|419300876|ref|ZP_13842875.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC11C]
gi|419307006|ref|ZP_13848906.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC11D]
gi|419312014|ref|ZP_13853876.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC11E]
gi|419317424|ref|ZP_13859227.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC12A]
gi|419323596|ref|ZP_13865289.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC12B]
gi|419329560|ref|ZP_13871164.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC12C]
gi|419335125|ref|ZP_13876658.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC12D]
gi|419870519|ref|ZP_14392612.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O103:H2
str. CVM9450]
gi|420391872|ref|ZP_14891125.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli EPEC C342-62]
gi|192932027|gb|EDV84626.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli E22]
gi|194414740|gb|EDX31011.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
B171]
gi|257759899|dbj|BAI31396.1| predicted oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|323161773|gb|EFZ47654.1| hypothetical protein ECE128010_2019 [Escherichia coli E128010]
gi|345376999|gb|EGX08931.1| hypothetical protein ECSTECH18_2792 [Escherichia coli STEC_H.1.8]
gi|378129889|gb|EHW91259.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC11A]
gi|378142503|gb|EHX03705.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC11B]
gi|378148993|gb|EHX10126.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC11D]
gi|378150492|gb|EHX11607.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC11C]
gi|378157642|gb|EHX18673.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC11E]
gi|378164672|gb|EHX25613.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC12B]
gi|378169007|gb|EHX29907.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC12A]
gi|378169876|gb|EHX30762.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC12C]
gi|378182204|gb|EHX42857.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC12D]
gi|386179228|gb|EIH56707.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3.2608]
gi|386215793|gb|EII32285.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
4.0967]
gi|388339320|gb|EIL05705.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O103:H2
str. CVM9450]
gi|391312553|gb|EIQ70161.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli EPEC C342-62]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|24113536|ref|NP_708046.1| dihydropyrimidine dehydrogenase subunit A [Shigella flexneri 2a
str. 301]
gi|110806123|ref|YP_689643.1| oxidoreductase [Shigella flexneri 5 str. 8401]
gi|417703225|ref|ZP_12352336.1| hypothetical protein SFK218_3122 [Shigella flexneri K-218]
gi|417734275|ref|ZP_12382926.1| hypothetical protein SF274771_2644 [Shigella flexneri 2747-71]
gi|417738967|ref|ZP_12387547.1| hypothetical protein SF434370_2304 [Shigella flexneri 4343-70]
gi|424838528|ref|ZP_18263165.1| putative oxidoreductase [Shigella flexneri 5a str. M90T]
gi|24052582|gb|AAN43753.1| putative oxidoreductase [Shigella flexneri 2a str. 301]
gi|110615671|gb|ABF04338.1| putative oxidoreductase [Shigella flexneri 5 str. 8401]
gi|332754778|gb|EGJ85143.1| hypothetical protein SF434370_2304 [Shigella flexneri 4343-70]
gi|332756349|gb|EGJ86700.1| hypothetical protein SF274771_2644 [Shigella flexneri 2747-71]
gi|333002085|gb|EGK21651.1| hypothetical protein SFK218_3122 [Shigella flexneri K-218]
gi|383467580|gb|EID62601.1| putative oxidoreductase [Shigella flexneri 5a str. M90T]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|419340596|ref|ZP_13882060.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC12E]
gi|378187507|gb|EHX48118.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC12E]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|82777370|ref|YP_403719.1| oxidoreductase [Shigella dysenteriae Sd197]
gi|81241518|gb|ABB62228.1| putative oxidoreductase [Shigella dysenteriae Sd197]
Length = 365
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|15802702|ref|NP_288729.1| oxidoreductase [Escherichia coli O157:H7 str. EDL933]
gi|15832292|ref|NP_311065.1| oxidoreductase [Escherichia coli O157:H7 str. Sakai]
gi|168750526|ref|ZP_02775548.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4113]
gi|168757728|ref|ZP_02782735.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4401]
gi|168763802|ref|ZP_02788809.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4501]
gi|168767759|ref|ZP_02792766.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4486]
gi|168773143|ref|ZP_02798150.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4196]
gi|168779989|ref|ZP_02804996.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4076]
gi|168788956|ref|ZP_02813963.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC869]
gi|168801165|ref|ZP_02826172.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC508]
gi|195935522|ref|ZP_03080904.1| putative oxidoreductase [Escherichia coli O157:H7 str. EC4024]
gi|208806212|ref|ZP_03248549.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4206]
gi|208813890|ref|ZP_03255219.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4045]
gi|208820673|ref|ZP_03260993.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4042]
gi|209398540|ref|YP_002271555.1| oxidoreductase [Escherichia coli O157:H7 str. EC4115]
gi|217327853|ref|ZP_03443936.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. TW14588]
gi|254794045|ref|YP_003078882.1| oxidoreductase [Escherichia coli O157:H7 str. TW14359]
gi|261223395|ref|ZP_05937676.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK2000]
gi|261259055|ref|ZP_05951588.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK966]
gi|291283400|ref|YP_003500218.1| hypothetical protein G2583_2689 [Escherichia coli O55:H7 str.
CB9615]
gi|387507536|ref|YP_006159792.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O55:H7
str. RM12579]
gi|387883369|ref|YP_006313671.1| putative oxidoreductase [Escherichia coli Xuzhou21]
gi|416310818|ref|ZP_11656553.1| putative oxidoreductase [Escherichia coli O157:H7 str. 1044]
gi|416318284|ref|ZP_11660994.1| putative oxidoreductase [Escherichia coli O157:H7 str. EC1212]
gi|416330487|ref|ZP_11669437.1| putative oxidoreductase [Escherichia coli O157:H7 str. 1125]
gi|416775382|ref|ZP_11874272.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H7
str. G5101]
gi|416787065|ref|ZP_11879182.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H-
str. 493-89]
gi|416798681|ref|ZP_11884099.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H-
str. H 2687]
gi|416809096|ref|ZP_11888783.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O55:H7
str. 3256-97]
gi|416819563|ref|ZP_11893341.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O55:H7
str. USDA 5905]
gi|416830489|ref|ZP_11898629.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H7
str. LSU-61]
gi|419046229|ref|ZP_13593166.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3A]
gi|419051859|ref|ZP_13598731.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3B]
gi|419057887|ref|ZP_13604693.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3C]
gi|419063356|ref|ZP_13610084.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3D]
gi|419070251|ref|ZP_13615875.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3E]
gi|419076210|ref|ZP_13621729.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3F]
gi|419081350|ref|ZP_13626798.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4A]
gi|419087120|ref|ZP_13632478.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4B]
gi|419093118|ref|ZP_13638404.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4C]
gi|419098845|ref|ZP_13644045.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4D]
gi|419104708|ref|ZP_13649837.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4E]
gi|419110164|ref|ZP_13655223.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4F]
gi|419121108|ref|ZP_13666066.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5B]
gi|419126602|ref|ZP_13671488.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5C]
gi|419132160|ref|ZP_13676998.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5D]
gi|419137193|ref|ZP_13681989.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC5E]
gi|420270682|ref|ZP_14773040.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA22]
gi|420276164|ref|ZP_14778448.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA40]
gi|420281467|ref|ZP_14783705.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW06591]
gi|420287490|ref|ZP_14789681.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW10246]
gi|420293099|ref|ZP_14795222.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW11039]
gi|420298973|ref|ZP_14801022.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW09109]
gi|420305061|ref|ZP_14807057.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW10119]
gi|420310604|ref|ZP_14812537.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1738]
gi|420316041|ref|ZP_14817917.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1734]
gi|421813064|ref|ZP_16248788.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 8.0416]
gi|421818953|ref|ZP_16254451.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 10.0821]
gi|421824776|ref|ZP_16260143.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK920]
gi|421831676|ref|ZP_16266963.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA7]
gi|423725738|ref|ZP_17699848.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA31]
gi|424078178|ref|ZP_17815182.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA505]
gi|424084633|ref|ZP_17821143.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA517]
gi|424091118|ref|ZP_17827063.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1996]
gi|424097689|ref|ZP_17833026.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1985]
gi|424103891|ref|ZP_17838690.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1990]
gi|424110593|ref|ZP_17844851.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 93-001]
gi|424116484|ref|ZP_17850348.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA3]
gi|424122699|ref|ZP_17856047.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA5]
gi|424128835|ref|ZP_17861759.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA9]
gi|424135089|ref|ZP_17867575.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA10]
gi|424141688|ref|ZP_17873601.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA14]
gi|424148120|ref|ZP_17879518.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA15]
gi|424153995|ref|ZP_17884971.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA24]
gi|424247820|ref|ZP_17890455.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA25]
gi|424324355|ref|ZP_17896376.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA28]
gi|424450380|ref|ZP_17902105.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA32]
gi|424456578|ref|ZP_17907740.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA33]
gi|424462964|ref|ZP_17913444.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA39]
gi|424469327|ref|ZP_17919173.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA41]
gi|424475867|ref|ZP_17925210.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA42]
gi|424481622|ref|ZP_17930621.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW07945]
gi|424487767|ref|ZP_17936355.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW09098]
gi|424494355|ref|ZP_17942132.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW09195]
gi|424501137|ref|ZP_17948061.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4203]
gi|424507371|ref|ZP_17953801.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4196]
gi|424514694|ref|ZP_17959411.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW14313]
gi|424521017|ref|ZP_17965160.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW14301]
gi|424526853|ref|ZP_17970587.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4421]
gi|424533013|ref|ZP_17976378.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4422]
gi|424539078|ref|ZP_17982047.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4013]
gi|424545097|ref|ZP_17987546.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4402]
gi|424551352|ref|ZP_17993236.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4439]
gi|424557537|ref|ZP_17998974.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4436]
gi|424563882|ref|ZP_18004902.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4437]
gi|424570010|ref|ZP_18010595.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4448]
gi|424576174|ref|ZP_18016277.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1845]
gi|424582017|ref|ZP_18021686.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1863]
gi|425098736|ref|ZP_18501488.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 3.4870]
gi|425104865|ref|ZP_18507194.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 5.2239]
gi|425110766|ref|ZP_18512702.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 6.0172]
gi|425126665|ref|ZP_18527861.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.0586]
gi|425132480|ref|ZP_18533344.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.2524]
gi|425138949|ref|ZP_18539355.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 10.0833]
gi|425144813|ref|ZP_18544822.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 10.0869]
gi|425150857|ref|ZP_18550491.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 88.0221]
gi|425156740|ref|ZP_18556021.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA34]
gi|425163178|ref|ZP_18562073.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA506]
gi|425168842|ref|ZP_18567341.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA507]
gi|425174977|ref|ZP_18573107.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA504]
gi|425181008|ref|ZP_18578714.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1999]
gi|425187271|ref|ZP_18584554.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1997]
gi|425194043|ref|ZP_18590826.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli NE1487]
gi|425200476|ref|ZP_18596706.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli NE037]
gi|425212591|ref|ZP_18608012.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA4]
gi|425218705|ref|ZP_18613696.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA23]
gi|425225233|ref|ZP_18619734.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA49]
gi|425231597|ref|ZP_18625646.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA45]
gi|425237513|ref|ZP_18631243.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TT12B]
gi|425249856|ref|ZP_18642807.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 5905]
gi|425255716|ref|ZP_18648251.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli CB7326]
gi|425261934|ref|ZP_18653964.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC96038]
gi|425267969|ref|ZP_18659613.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 5412]
gi|425295405|ref|ZP_18685625.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA38]
gi|425312075|ref|ZP_18701277.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1735]
gi|425318021|ref|ZP_18706831.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1736]
gi|425324120|ref|ZP_18712510.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1737]
gi|425330405|ref|ZP_18718294.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1846]
gi|425336569|ref|ZP_18723976.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1847]
gi|425342977|ref|ZP_18729894.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1848]
gi|425348778|ref|ZP_18735277.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1849]
gi|425355073|ref|ZP_18741163.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1850]
gi|425361033|ref|ZP_18746706.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1856]
gi|425367204|ref|ZP_18752402.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1862]
gi|425373579|ref|ZP_18758245.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1864]
gi|425386425|ref|ZP_18770005.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1866]
gi|425393148|ref|ZP_18776278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1868]
gi|425399247|ref|ZP_18781977.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1869]
gi|425405325|ref|ZP_18787581.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1870]
gi|425411729|ref|ZP_18793520.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli NE098]
gi|425418060|ref|ZP_18799354.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK523]
gi|425429390|ref|ZP_18810016.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 0.1304]
gi|428947760|ref|ZP_19020066.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 88.1467]
gi|428953862|ref|ZP_19025677.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 88.1042]
gi|428959796|ref|ZP_19031130.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 89.0511]
gi|428966365|ref|ZP_19037143.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 90.0091]
gi|428972227|ref|ZP_19042589.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 90.0039]
gi|428978687|ref|ZP_19048531.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 90.2281]
gi|428984495|ref|ZP_19053907.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 93.0055]
gi|428990620|ref|ZP_19059627.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 93.0056]
gi|428996420|ref|ZP_19065049.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 94.0618]
gi|429002659|ref|ZP_19070820.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.0183]
gi|429008801|ref|ZP_19076345.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.1288]
gi|429015247|ref|ZP_19082168.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.0943]
gi|429021306|ref|ZP_19087845.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0428]
gi|429027209|ref|ZP_19093242.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0427]
gi|429033418|ref|ZP_19098960.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0939]
gi|429039517|ref|ZP_19104650.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0932]
gi|429045465|ref|ZP_19110196.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0107]
gi|429050815|ref|ZP_19115393.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.0003]
gi|429056146|ref|ZP_19120499.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.1742]
gi|429061691|ref|ZP_19125730.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.0007]
gi|429073900|ref|ZP_19137164.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 99.0678]
gi|429079098|ref|ZP_19142245.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0713]
gi|429827099|ref|ZP_19358177.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0109]
gi|429833426|ref|ZP_19363824.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.0010]
gi|444925687|ref|ZP_21245003.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 09BKT078844]
gi|444931391|ref|ZP_21250448.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0814]
gi|444936800|ref|ZP_21255595.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0815]
gi|444942428|ref|ZP_21260964.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0816]
gi|444948047|ref|ZP_21266369.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0839]
gi|444953497|ref|ZP_21271608.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0848]
gi|444958970|ref|ZP_21276839.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1753]
gi|444964190|ref|ZP_21281822.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1775]
gi|444970118|ref|ZP_21287494.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1793]
gi|444975379|ref|ZP_21292525.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1805]
gi|444980851|ref|ZP_21297770.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli ATCC 700728]
gi|444986201|ref|ZP_21302994.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA11]
gi|444991517|ref|ZP_21308173.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA19]
gi|444996808|ref|ZP_21313319.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA13]
gi|445002364|ref|ZP_21318764.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA2]
gi|445007864|ref|ZP_21324117.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA47]
gi|445012896|ref|ZP_21329014.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA48]
gi|445018772|ref|ZP_21334748.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA8]
gi|445024284|ref|ZP_21340119.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 7.1982]
gi|445029557|ref|ZP_21345245.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1781]
gi|445035017|ref|ZP_21350559.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1762]
gi|445040643|ref|ZP_21356032.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA35]
gi|445045840|ref|ZP_21361104.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 3.4880]
gi|445051413|ref|ZP_21366478.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.0083]
gi|445057173|ref|ZP_21372043.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0670]
gi|452971352|ref|ZP_21969579.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H7
str. EC4009]
gi|20178203|sp|Q8X645.1|PRET_ECO57 RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreT; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|12516463|gb|AAG57284.1|AE005446_12 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
gi|13362507|dbj|BAB36461.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
gi|187771188|gb|EDU35032.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4196]
gi|188015316|gb|EDU53438.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4113]
gi|189002157|gb|EDU71143.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4076]
gi|189355376|gb|EDU73795.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4401]
gi|189362979|gb|EDU81398.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4486]
gi|189366103|gb|EDU84519.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4501]
gi|189371346|gb|EDU89762.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC869]
gi|189376653|gb|EDU95069.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC508]
gi|208726013|gb|EDZ75614.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4206]
gi|208735167|gb|EDZ83854.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4045]
gi|208740796|gb|EDZ88478.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4042]
gi|209159940|gb|ACI37373.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. EC4115]
gi|209766288|gb|ACI81456.1| putative oxidoreductase [Escherichia coli]
gi|209766290|gb|ACI81457.1| putative oxidoreductase [Escherichia coli]
gi|209766292|gb|ACI81458.1| putative oxidoreductase [Escherichia coli]
gi|209766294|gb|ACI81459.1| putative oxidoreductase [Escherichia coli]
gi|209766296|gb|ACI81460.1| putative oxidoreductase [Escherichia coli]
gi|217320220|gb|EEC28645.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
O157:H7 str. TW14588]
gi|254593445|gb|ACT72806.1| predicted oxidoreductase [Escherichia coli O157:H7 str. TW14359]
gi|290763273|gb|ADD57234.1| Uncharacterized oxidoreductase yeiT [Escherichia coli O55:H7 str.
CB9615]
gi|320192231|gb|EFW66876.1| putative oxidoreductase [Escherichia coli O157:H7 str. EC1212]
gi|320641217|gb|EFX10695.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H7
str. G5101]
gi|320646605|gb|EFX15516.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H-
str. 493-89]
gi|320651860|gb|EFX20235.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H-
str. H 2687]
gi|320657584|gb|EFX25382.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320663190|gb|EFX30499.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O55:H7
str. USDA 5905]
gi|320667941|gb|EFX34844.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O157:H7
str. LSU-61]
gi|326339496|gb|EGD63307.1| putative oxidoreductase [Escherichia coli O157:H7 str. 1125]
gi|326343957|gb|EGD67718.1| putative oxidoreductase [Escherichia coli O157:H7 str. 1044]
gi|374359530|gb|AEZ41237.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O55:H7
str. RM12579]
gi|377893059|gb|EHU57498.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3A]
gi|377893544|gb|EHU57978.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3B]
gi|377905157|gb|EHU69431.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3C]
gi|377909831|gb|EHU74029.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3D]
gi|377912461|gb|EHU76620.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3E]
gi|377921567|gb|EHU85563.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC3F]
gi|377925980|gb|EHU89915.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4A]
gi|377930648|gb|EHU94528.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4B]
gi|377942257|gb|EHV05992.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4C]
gi|377942698|gb|EHV06431.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4D]
gi|377947191|gb|EHV10858.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4E]
gi|377957442|gb|EHV20974.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC4F]
gi|377967049|gb|EHV30456.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5B]
gi|377975067|gb|EHV38389.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5C]
gi|377975727|gb|EHV39044.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC5D]
gi|377984186|gb|EHV47421.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC5E]
gi|386796827|gb|AFJ29861.1| putative oxidoreductase [Escherichia coli Xuzhou21]
gi|390641869|gb|EIN21293.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1996]
gi|390643114|gb|EIN22477.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA517]
gi|390644144|gb|EIN23437.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA505]
gi|390660808|gb|EIN38498.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 93-001]
gi|390662388|gb|EIN39992.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1985]
gi|390664113|gb|EIN41575.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1990]
gi|390677916|gb|EIN53916.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA3]
gi|390681129|gb|EIN56933.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA5]
gi|390683815|gb|EIN59467.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA9]
gi|390697037|gb|EIN71471.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA10]
gi|390701093|gb|EIN75348.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA15]
gi|390701789|gb|EIN76007.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA14]
gi|390714194|gb|EIN87108.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA22]
gi|390723045|gb|EIN95665.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA25]
gi|390724603|gb|EIN97152.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA24]
gi|390727823|gb|EIO00206.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA28]
gi|390743017|gb|EIO14004.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA31]
gi|390743418|gb|EIO14395.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA32]
gi|390745831|gb|EIO16611.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA33]
gi|390757574|gb|EIO27044.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA40]
gi|390767773|gb|EIO36839.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA41]
gi|390769090|gb|EIO38042.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA39]
gi|390769549|gb|EIO38476.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA42]
gi|390781754|gb|EIO49431.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW06591]
gi|390790247|gb|EIO57675.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW10246]
gi|390791455|gb|EIO58846.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW07945]
gi|390797185|gb|EIO64441.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW11039]
gi|390806614|gb|EIO73517.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW09098]
gi|390806668|gb|EIO73570.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW09109]
gi|390816083|gb|EIO82595.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW10119]
gi|390826261|gb|EIO92117.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4203]
gi|390830870|gb|EIO96357.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW09195]
gi|390831598|gb|EIO96966.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4196]
gi|390846294|gb|EIP09898.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW14301]
gi|390847423|gb|EIP10965.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TW14313]
gi|390850823|gb|EIP14164.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4421]
gi|390861619|gb|EIP23863.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4422]
gi|390865821|gb|EIP27815.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4013]
gi|390871175|gb|EIP32617.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4402]
gi|390878896|gb|EIP39706.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4439]
gi|390883922|gb|EIP44311.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4436]
gi|390893930|gb|EIP53464.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4437]
gi|390896173|gb|EIP55564.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC4448]
gi|390899883|gb|EIP59119.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1738]
gi|390908031|gb|EIP66872.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1734]
gi|390919522|gb|EIP77871.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1863]
gi|390920491|gb|EIP78759.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1845]
gi|408064048|gb|EKG98530.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA7]
gi|408067828|gb|EKH02256.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK920]
gi|408071124|gb|EKH05477.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA34]
gi|408078766|gb|EKH12894.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA506]
gi|408083074|gb|EKH16992.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA507]
gi|408091335|gb|EKH24566.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FDA504]
gi|408097448|gb|EKH30339.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1999]
gi|408104153|gb|EKH36475.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK1997]
gi|408108384|gb|EKH40387.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli NE1487]
gi|408115246|gb|EKH46712.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli NE037]
gi|408127681|gb|EKH58118.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA4]
gi|408138726|gb|EKH68382.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA23]
gi|408140423|gb|EKH69939.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA49]
gi|408145998|gb|EKH75141.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA45]
gi|408155354|gb|EKH83677.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli TT12B]
gi|408164023|gb|EKH91863.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 5905]
gi|408173489|gb|EKI00509.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli CB7326]
gi|408180601|gb|EKI07206.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC96038]
gi|408183030|gb|EKI09504.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 5412]
gi|408217963|gb|EKI42197.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli PA38]
gi|408227623|gb|EKI51205.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1735]
gi|408238669|gb|EKI61455.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1736]
gi|408243089|gb|EKI65633.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1737]
gi|408247467|gb|EKI69667.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1846]
gi|408256550|gb|EKI77925.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1847]
gi|408259252|gb|EKI80439.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1848]
gi|408265645|gb|EKI86327.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1849]
gi|408274979|gb|EKI94961.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1850]
gi|408277229|gb|EKI97039.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1856]
gi|408287064|gb|EKJ05960.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1862]
gi|408291232|gb|EKJ09866.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1864]
gi|408308320|gb|EKJ25590.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1868]
gi|408308432|gb|EKJ25701.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1866]
gi|408319442|gb|EKJ35578.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1869]
gi|408326177|gb|EKJ42001.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli EC1870]
gi|408327033|gb|EKJ42802.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli NE098]
gi|408336816|gb|EKJ51564.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK523]
gi|408346643|gb|EKJ60929.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 0.1304]
gi|408549954|gb|EKK27299.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 5.2239]
gi|408550777|gb|EKK28093.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 3.4870]
gi|408551335|gb|EKK28616.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 6.0172]
gi|408570190|gb|EKK46170.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.0586]
gi|408579847|gb|EKK55295.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 10.0833]
gi|408581485|gb|EKK56820.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 8.2524]
gi|408591534|gb|EKK65955.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 10.0869]
gi|408596580|gb|EKK70705.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 88.0221]
gi|408601370|gb|EKK75173.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 8.0416]
gi|408612710|gb|EKK86044.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 10.0821]
gi|427205011|gb|EKV75271.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 88.1042]
gi|427207385|gb|EKV77554.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 89.0511]
gi|427208619|gb|EKV78708.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 88.1467]
gi|427222182|gb|EKV90974.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 90.0091]
gi|427224661|gb|EKV93360.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 90.2281]
gi|427227969|gb|EKV96453.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 90.0039]
gi|427242248|gb|EKW09663.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 93.0056]
gi|427242797|gb|EKW10194.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 93.0055]
gi|427246401|gb|EKW13615.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 94.0618]
gi|427261657|gb|EKW27574.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.0183]
gi|427262223|gb|EKW28124.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.0943]
gi|427264979|gb|EKW30606.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.1288]
gi|427276868|gb|EKW41433.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0428]
gi|427279612|gb|EKW44023.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0427]
gi|427283380|gb|EKW47588.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0939]
gi|427292142|gb|EKW55498.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0932]
gi|427299557|gb|EKW62528.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0107]
gi|427300741|gb|EKW63666.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.0003]
gi|427313629|gb|EKW75727.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.1742]
gi|427315977|gb|EKW77951.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.0007]
gi|427328506|gb|EKW89868.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli 99.0678]
gi|427329428|gb|EKW90754.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0713]
gi|429254173|gb|EKY38613.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 96.0109]
gi|429255898|gb|EKY40179.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 97.0010]
gi|444538628|gb|ELV18475.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0814]
gi|444540119|gb|ELV19818.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 09BKT078844]
gi|444547778|gb|ELV26335.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0815]
gi|444557627|gb|ELV34953.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0839]
gi|444558841|gb|ELV36102.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0816]
gi|444563811|gb|ELV40787.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0848]
gi|444573489|gb|ELV49854.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1753]
gi|444578006|gb|ELV54099.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1775]
gi|444579671|gb|ELV55648.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1793]
gi|444593646|gb|ELV68853.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli ATCC 700728]
gi|444593906|gb|ELV69110.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA11]
gi|444596156|gb|ELV71239.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1805]
gi|444607364|gb|ELV81942.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA13]
gi|444607671|gb|ELV82239.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA19]
gi|444616223|gb|ELV90391.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA2]
gi|444624128|gb|ELV98033.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA47]
gi|444624538|gb|ELV98420.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA48]
gi|444630168|gb|ELW03833.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA8]
gi|444638988|gb|ELW12309.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 7.1982]
gi|444641892|gb|ELW15108.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1781]
gi|444645521|gb|ELW18583.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.1762]
gi|444654718|gb|ELW27365.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli PA35]
gi|444660137|gb|ELW32510.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 3.4880]
gi|444665140|gb|ELW37283.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 95.0083]
gi|444669922|gb|ELW41856.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 99.0670]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|381211302|ref|ZP_09918373.1| dihydropyrimidine dehydrogenase subunit A [Lentibacillus sp. Grbi]
gi|381211384|ref|ZP_09918455.1| dihydropyrimidine dehydrogenase subunit A [Lentibacillus sp. Grbi]
Length = 457
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 103/168 (61%), Gaps = 11/168 (6%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N+ + L NF + K + + + AL EA+RCL C DAPC K+CPT IDI SFI I+
Sbjct: 7 NLLSDEDLAQNFAESK-PSYNAQEALDEANRCLYCYDAPCIKACPTGIDIPSFIKKIASG 65
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKD 128
N G+AK I +NP+G +C VCPT +LC G C L + + PI IG LQ+FAT+ + +
Sbjct: 66 NLKGSAKTIMEENPIGASCARVCPTEELCEGACVLNDSTK-PIMIGDLQRFATDWSIKNE 124
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++ + K +IA++G GPA LS A L R+GY ++T++E
Sbjct: 125 QVMFKVGKKNGK------RIAIVGSGPAGLSAARELGRLGY-EVTVFE 165
>gi|425243736|ref|ZP_18637056.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli MA6]
gi|408160015|gb|EKH88059.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli MA6]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|30063590|ref|NP_837761.1| oxidoreductase [Shigella flexneri 2a str. 2457T]
gi|384543816|ref|YP_005727879.1| putative NADPH-dependent glutamate synthase beta chain-like
oxidoreductase [Shigella flexneri 2002017]
gi|415853275|ref|ZP_11529284.1| uncharacterized oxidoreductase yeiT [Shigella flexneri 2a str.
2457T]
gi|417723830|ref|ZP_12372635.1| hypothetical protein SFK304_2938 [Shigella flexneri K-304]
gi|417729059|ref|ZP_12377757.1| hypothetical protein SFK671_2724 [Shigella flexneri K-671]
gi|420341009|ref|ZP_14842518.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri K-404]
gi|30041843|gb|AAP17570.1| putative oxidoreductase [Shigella flexneri 2a str. 2457T]
gi|281601602|gb|ADA74586.1| putative NADPH-dependent glutamate synthase beta chain-like
oxidoreductase [Shigella flexneri 2002017]
gi|313651252|gb|EFS15650.1| uncharacterized oxidoreductase yeiT [Shigella flexneri 2a str.
2457T]
gi|332755184|gb|EGJ85548.1| hypothetical protein SFK671_2724 [Shigella flexneri K-671]
gi|333016688|gb|EGK36017.1| hypothetical protein SFK304_2938 [Shigella flexneri K-304]
gi|391271539|gb|EIQ30413.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri K-404]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|157161626|ref|YP_001458944.1| oxidoreductase [Escherichia coli HS]
gi|188493597|ref|ZP_03000867.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
53638]
gi|300950095|ref|ZP_07164042.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
116-1]
gi|312973605|ref|ZP_07787777.1| uncharacterized oxidoreductase yeiT [Escherichia coli 1827-70]
gi|432526923|ref|ZP_19764017.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE233]
gi|157067306|gb|ABV06561.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli HS]
gi|188488796|gb|EDU63899.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
53638]
gi|300450585|gb|EFK14205.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
116-1]
gi|310332200|gb|EFP99435.1| uncharacterized oxidoreductase yeiT [Escherichia coli 1827-70]
gi|431063581|gb|ELD72820.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE233]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|194431394|ref|ZP_03063686.1| pyridine nucleotide-disulfide oxidoreductase [Shigella dysenteriae
1012]
gi|417672554|ref|ZP_12322020.1| hypothetical protein SD15574_2141 [Shigella dysenteriae 155-74]
gi|194420219|gb|EDX36296.1| pyridine nucleotide-disulfide oxidoreductase [Shigella dysenteriae
1012]
gi|332092638|gb|EGI97709.1| hypothetical protein SD15574_2141 [Shigella dysenteriae 155-74]
Length = 412
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|420346083|ref|ZP_14847508.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella boydii 965-58]
gi|391274803|gb|EIQ33603.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella boydii 965-58]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|415813256|ref|ZP_11505065.1| hypothetical protein ECLT68_3437 [Escherichia coli LT-68]
gi|323171797|gb|EFZ57441.1| hypothetical protein ECLT68_3437 [Escherichia coli LT-68]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|425422964|ref|ZP_18804132.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 0.1288]
gi|408343519|gb|EKJ57913.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 0.1288]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417597460|ref|ZP_12248102.1| hypothetical protein EC30301_2598 [Escherichia coli 3030-1]
gi|419950452|ref|ZP_14466665.1| putative oxidoreductase [Escherichia coli CUMT8]
gi|432968256|ref|ZP_20157171.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE203]
gi|345353745|gb|EGW85974.1| hypothetical protein EC30301_2598 [Escherichia coli 3030-1]
gi|388416776|gb|EIL76652.1| putative oxidoreductase [Escherichia coli CUMT8]
gi|431471373|gb|ELH51266.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE203]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417629390|ref|ZP_12279628.1| hypothetical protein ECSTECMHI813_2312 [Escherichia coli
STEC_MHI813]
gi|345373358|gb|EGX05319.1| hypothetical protein ECSTECMHI813_2312 [Escherichia coli
STEC_MHI813]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417688692|ref|ZP_12337933.1| hypothetical protein SB521682_0945 [Shigella boydii 5216-82]
gi|332093239|gb|EGI98299.1| hypothetical protein SB521682_0945 [Shigella boydii 5216-82]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|331683823|ref|ZP_08384419.1| putative oxidoreductase [Escherichia coli H299]
gi|422834061|ref|ZP_16882125.1| hypothetical protein ESOG_01726 [Escherichia coli E101]
gi|450190515|ref|ZP_21890874.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
SEPT362]
gi|331078775|gb|EGI49977.1| putative oxidoreductase [Escherichia coli H299]
gi|371603488|gb|EHN92143.1| hypothetical protein ESOG_01726 [Escherichia coli E101]
gi|449320493|gb|EMD10524.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
SEPT362]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|432948027|ref|ZP_20143183.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE196]
gi|433043729|ref|ZP_20231225.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE117]
gi|431458005|gb|ELH38342.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE196]
gi|431556050|gb|ELI29885.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE117]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K+ K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYQPGTKM---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|416274744|ref|ZP_11643792.1| putative oxidoreductase [Shigella dysenteriae CDC 74-1112]
gi|320173375|gb|EFW48576.1| putative oxidoreductase [Shigella dysenteriae CDC 74-1112]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|187733715|ref|YP_001879525.1| putative oxidoreductase [Shigella boydii CDC 3083-94]
gi|417122240|ref|ZP_11971498.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
97.0246]
gi|420380618|ref|ZP_14880080.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella dysenteriae 225-75]
gi|187430707|gb|ACD09981.1| pyridine nucleotide-disulfide oxidoreductase [Shigella boydii CDC
3083-94]
gi|386147520|gb|EIG93960.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
97.0246]
gi|391301764|gb|EIQ59645.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella dysenteriae 225-75]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|307311275|ref|ZP_07590919.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Escherichia coli W]
gi|378712403|ref|YP_005277296.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Escherichia coli KO11FL]
gi|386609538|ref|YP_006125024.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli W]
gi|386700868|ref|YP_006164705.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli KO11FL]
gi|386710020|ref|YP_006173741.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli W]
gi|306908781|gb|EFN39278.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Escherichia coli W]
gi|315061455|gb|ADT75782.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli W]
gi|323377964|gb|ADX50232.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Escherichia coli KO11FL]
gi|383392395|gb|AFH17353.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli KO11FL]
gi|383405712|gb|AFH11955.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli W]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|432450310|ref|ZP_19692575.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE193]
gi|433033989|ref|ZP_20221705.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE112]
gi|430979700|gb|ELC96465.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE193]
gi|431550995|gb|ELI24982.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE112]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417272221|ref|ZP_12059570.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
2.4168]
gi|386235921|gb|EII67897.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
2.4168]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQTSVTLTNQGY-DVTIYEKEAH 158
>gi|416898180|ref|ZP_11927744.1| hypothetical protein ECSTEC7V_2551 [Escherichia coli STEC_7v]
gi|417114834|ref|ZP_11965970.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
1.2741]
gi|422799426|ref|ZP_16847925.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
M863]
gi|323968070|gb|EGB63480.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
M863]
gi|327252384|gb|EGE64043.1| hypothetical protein ECSTEC7V_2551 [Escherichia coli STEC_7v]
gi|386140253|gb|EIG81405.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
1.2741]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDDPIDIGRLQRFITDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ MGY D+TIYEK
Sbjct: 134 PAGLQASVTLTNMGY-DVTIYEKE 156
>gi|422780942|ref|ZP_16833727.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
TW10509]
gi|323977660|gb|EGB72746.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
TW10509]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDDPIDIGRLQRFITDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ MGY D+TIYEK
Sbjct: 134 PAGLQASVTLTNMGY-DVTIYEKE 156
>gi|418257078|ref|ZP_12880787.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Shigella
flexneri 6603-63]
gi|397897548|gb|EJL13955.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Shigella
flexneri 6603-63]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDSPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|424816939|ref|ZP_18242090.1| oxidoreductase [Escherichia fergusonii ECD227]
gi|325497959|gb|EGC95818.1| oxidoreductase [Escherichia fergusonii ECD227]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDDPIDIGRLQRFITDFEQQTGMDIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ MGY D+TIYEK
Sbjct: 134 PAGLQASVTLTNMGY-DVTIYEKE 156
>gi|417713174|ref|ZP_12362141.1| hypothetical protein SFK272_2908 [Shigella flexneri K-272]
gi|417718013|ref|ZP_12366914.1| hypothetical protein SFK227_2747 [Shigella flexneri K-227]
gi|333002865|gb|EGK22421.1| hypothetical protein SFK272_2908 [Shigella flexneri K-272]
gi|333016868|gb|EGK36192.1| hypothetical protein SFK227_2747 [Shigella flexneri K-227]
Length = 412
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQRGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|419892228|ref|ZP_14412258.1| dihydropyrimidine dehydrogenase subunit A, partial [Escherichia
coli O111:H8 str. CVM9570]
gi|388348248|gb|EIL13866.1| dihydropyrimidine dehydrogenase subunit A, partial [Escherichia
coli O111:H8 str. CVM9570]
Length = 407
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|297518576|ref|ZP_06936962.1| putative oxidoreductase [Escherichia coli OP50]
Length = 273
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|229162094|ref|ZP_04290067.1| Glutamate synthase, small subunit [Bacillus cereus R309803]
gi|228621416|gb|EEK78269.1| Glutamate synthase, small subunit [Bacillus cereus R309803]
Length = 462
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 102/183 (55%), Gaps = 19/183 (10%)
Query: 22 FDDIKHT------TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+DIKH L+ + ++EA+RCL C DAPC K+CPT IDI SFI I+ N G+
Sbjct: 11 IEDIKHNFLEVKPDLTFKEVIEEANRCLYCYDAPCIKACPTSIDIPSFIKKITTDNLKGS 70
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
A+ IF NP+G TC VCPT +LC G C L A + PI IG LQ+ T + +
Sbjct: 71 ARVIFEANPVGATCARVCPTEELCEGACVLNEASQ-PIKIGDLQRHVTNWTMKNEVQLFK 129
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+ K IA++G GPA LS A L+R+GY +TI+E +TY +V+ P
Sbjct: 130 EGEKK----GKTIAIVGSGPAGLSAARELARLGY-TVTIFEAKEKAGGLDTYGIVSFRLP 184
Query: 189 RIV 191
+ V
Sbjct: 185 QEV 187
>gi|433462003|ref|ZP_20419599.1| dihydropyrimidine dehydrogenase subunit A [Halobacillus sp.
BAB-2008]
gi|432189447|gb|ELK46554.1| dihydropyrimidine dehydrogenase subunit A [Halobacillus sp.
BAB-2008]
Length = 457
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NF ++ HT L+ + A++E++RCL C DAPC K+CPT IDI FI I+ N G+A
Sbjct: 13 NLQANFKEV-HTGLNTQEAMEESNRCLYCYDAPCIKACPTSIDIPKFIKKIASGNLKGSA 71
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
I NP+G TC VCPT +LC G C L + E PI IG LQ+FAT D I +
Sbjct: 72 TTIMEANPVGATCARVCPTEELCEGACVLNHSTE-PILIGDLQRFAT----DWAIKNEQL 126
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
+ K+A+IG GPA L+ A L+R GY ++TI+E +TY +V+ P+
Sbjct: 127 LFKPGEKNGKKVAVIGGGPAGLASARELARFGY-EVTIFEAEKEAGGLDTYGIVSFRLPQ 185
Query: 190 IV 191
V
Sbjct: 186 DV 187
>gi|218549559|ref|YP_002383350.1| oxidoreductase [Escherichia fergusonii ATCC 35469]
gi|218357100|emb|CAQ89733.1| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia fergusonii ATCC 35469]
Length = 412
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDDPIDIGRLQRFITDFEQQTGMDIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ MGY D+TIYEK
Sbjct: 134 PAGLQASVTLTNMGY-DVTIYEKE 156
>gi|418945191|ref|ZP_13498094.1| dihydropyrimidine dehydrogenase subunit A, partial [Escherichia
coli O157:H43 str. T22]
gi|375319491|gb|EHS65635.1| dihydropyrimidine dehydrogenase subunit A, partial [Escherichia
coli O157:H43 str. T22]
Length = 424
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 31 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 90
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 91 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 145
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 146 PAGLQASVTLTNQGY-DVTIYEKEAH 170
>gi|422804835|ref|ZP_16853267.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia
fergusonii B253]
gi|324114438|gb|EGC08407.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia
fergusonii B253]
Length = 412
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDDPIDIGRLQRFITDFEQQTGMDIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ MGY D+TIYEK
Sbjct: 134 PAGLQASVTLTNMGY-DVTIYEKE 156
>gi|331653575|ref|ZP_08354576.1| putative oxidoreductase [Escherichia coli M718]
gi|331048424|gb|EGI20500.1| putative oxidoreductase [Escherichia coli M718]
Length = 412
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|157157365|ref|YP_001463497.1| oxidoreductase [Escherichia coli E24377A]
gi|191165348|ref|ZP_03027190.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli B7A]
gi|300926248|ref|ZP_07142051.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
182-1]
gi|301328625|ref|ZP_07221686.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
78-1]
gi|422956480|ref|ZP_16968954.1| hypothetical protein ESQG_00449 [Escherichia coli H494]
gi|157079395|gb|ABV19103.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E24377A]
gi|190904511|gb|EDV64218.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli B7A]
gi|300417677|gb|EFK00988.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
182-1]
gi|300845017|gb|EFK72777.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
78-1]
gi|371600015|gb|EHN88793.1| hypothetical protein ESQG_00449 [Escherichia coli H494]
Length = 412
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|419930850|ref|ZP_14448442.1| putative oxidoreductase [Escherichia coli 541-1]
gi|388399369|gb|EIL60169.1| putative oxidoreductase [Escherichia coli 541-1]
Length = 412
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417238102|ref|ZP_12035833.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
9.0111]
gi|386213880|gb|EII24305.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
9.0111]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|193071082|ref|ZP_03052008.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E110019]
gi|432675265|ref|ZP_19910725.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE142]
gi|192955605|gb|EDV86082.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E110019]
gi|431214241|gb|ELF12066.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE142]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|218554711|ref|YP_002387624.1| putative oxidoreductase [Escherichia coli IAI1]
gi|293446496|ref|ZP_06662918.1| oxidoreductase yeiT [Escherichia coli B088]
gi|300819163|ref|ZP_07099365.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
107-1]
gi|332278700|ref|ZP_08391113.1| pyridine nucleotide-disulfide oxidoreductase [Shigella sp. D9]
gi|415875999|ref|ZP_11542572.1| putative oxidoreductase [Escherichia coli MS 79-10]
gi|416343709|ref|ZP_11677609.1| putative oxidoreductase [Escherichia coli EC4100B]
gi|417133449|ref|ZP_11978234.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
5.0588]
gi|417146374|ref|ZP_11987332.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
1.2264]
gi|417154615|ref|ZP_11992744.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
96.0497]
gi|417581657|ref|ZP_12232459.1| hypothetical protein ECSTECB2F1_2321 [Escherichia coli STEC_B2F1]
gi|417608775|ref|ZP_12259278.1| hypothetical protein ECSTECDG1313_3175 [Escherichia coli
STEC_DG131-3]
gi|417667565|ref|ZP_12317110.1| hypothetical protein ECSTECO31_2374 [Escherichia coli STEC_O31]
gi|418041967|ref|ZP_12680178.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli W26]
gi|419345811|ref|ZP_13887186.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13A]
gi|419350224|ref|ZP_13891562.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13B]
gi|419355636|ref|ZP_13896894.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13C]
gi|419360729|ref|ZP_13901947.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13D]
gi|419365819|ref|ZP_13906981.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13E]
gi|419370650|ref|ZP_13911769.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC14A]
gi|419803765|ref|ZP_14328932.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
AI27]
gi|432481519|ref|ZP_19723476.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE210]
gi|432806307|ref|ZP_20040235.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE91]
gi|432809800|ref|ZP_20043693.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE101]
gi|432934941|ref|ZP_20134378.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE184]
gi|433194228|ref|ZP_20378218.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE90]
gi|218361479|emb|CAQ99068.1| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia coli IAI1]
gi|291323326|gb|EFE62754.1| oxidoreductase yeiT [Escherichia coli B088]
gi|300528316|gb|EFK49378.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
107-1]
gi|320199741|gb|EFW74330.1| putative oxidoreductase [Escherichia coli EC4100B]
gi|332101052|gb|EGJ04398.1| pyridine nucleotide-disulfide oxidoreductase [Shigella sp. D9]
gi|342928930|gb|EGU97652.1| putative oxidoreductase [Escherichia coli MS 79-10]
gi|345337428|gb|EGW69860.1| hypothetical protein ECSTECB2F1_2321 [Escherichia coli STEC_B2F1]
gi|345357984|gb|EGW90172.1| hypothetical protein ECSTECDG1313_3175 [Escherichia coli
STEC_DG131-3]
gi|378186924|gb|EHX47545.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13A]
gi|378200402|gb|EHX60857.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13B]
gi|378200966|gb|EHX61419.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13C]
gi|378203170|gb|EHX63594.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13D]
gi|378213054|gb|EHX73373.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC13E]
gi|378217244|gb|EHX77523.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC14A]
gi|383475154|gb|EID67122.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli W26]
gi|384473164|gb|EIE57208.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
AI27]
gi|386151303|gb|EIH02592.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
5.0588]
gi|386163826|gb|EIH25621.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
1.2264]
gi|386167704|gb|EIH34220.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
96.0497]
gi|397784711|gb|EJK95564.1| hypothetical protein ECSTECO31_2374 [Escherichia coli STEC_O31]
gi|431006891|gb|ELD21860.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE210]
gi|431354449|gb|ELG41175.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE91]
gi|431362568|gb|ELG49146.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE101]
gi|431453109|gb|ELH33519.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE184]
gi|431715678|gb|ELJ79823.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE90]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|209919604|ref|YP_002293688.1| putative oxidoreductase [Escherichia coli SE11]
gi|218695757|ref|YP_002403424.1| oxidoreductase [Escherichia coli 55989]
gi|260856119|ref|YP_003230010.1| oxidoreductase [Escherichia coli O26:H11 str. 11368]
gi|260868848|ref|YP_003235250.1| putative oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|300822592|ref|ZP_07102730.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
119-7]
gi|309793024|ref|ZP_07687452.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
145-7]
gi|331668845|ref|ZP_08369693.1| putative oxidoreductase [Escherichia coli TA271]
gi|331678094|ref|ZP_08378769.1| putative oxidoreductase [Escherichia coli H591]
gi|407470038|ref|YP_006783519.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407481299|ref|YP_006778448.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 2011C-3493]
gi|410481846|ref|YP_006769392.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 2009EL-2050]
gi|415793523|ref|ZP_11496140.1| hypothetical protein ECEPECA14_5792 [Escherichia coli EPECa14]
gi|415823003|ref|ZP_11511522.1| hypothetical protein ECOK1180_4324 [Escherichia coli OK1180]
gi|415829158|ref|ZP_11515541.1| hypothetical protein ECOK1357_2502 [Escherichia coli OK1357]
gi|417159613|ref|ZP_11996641.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
99.0741]
gi|417192208|ref|ZP_12014308.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
4.0522]
gi|417221197|ref|ZP_12024637.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
96.154]
gi|417268860|ref|ZP_12056220.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3.3884]
gi|417298479|ref|ZP_12085718.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
900105 (10e)]
gi|417592402|ref|ZP_12243099.1| hypothetical protein EC253486_3009 [Escherichia coli 2534-86]
gi|417602738|ref|ZP_12253308.1| hypothetical protein ECSTEC94C_2535 [Escherichia coli STEC_94C]
gi|417805711|ref|ZP_12452660.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. LB226692]
gi|417833454|ref|ZP_12479902.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 01-09591]
gi|417863528|ref|ZP_12508576.1| hypothetical protein C22711_0461 [Escherichia coli O104:H4 str.
C227-11]
gi|419197604|ref|ZP_13740992.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC8A]
gi|419210298|ref|ZP_13753378.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8C]
gi|419216194|ref|ZP_13759196.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8D]
gi|419222132|ref|ZP_13765055.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8E]
gi|419227333|ref|ZP_13770191.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9A]
gi|419233096|ref|ZP_13775873.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9B]
gi|419238397|ref|ZP_13781118.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9C]
gi|419243864|ref|ZP_13786503.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9D]
gi|419249690|ref|ZP_13792274.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9E]
gi|419255506|ref|ZP_13798025.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10A]
gi|419261706|ref|ZP_13804128.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10B]
gi|419267779|ref|ZP_13810134.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10C]
gi|419273237|ref|ZP_13815536.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10D]
gi|419284747|ref|ZP_13826923.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10F]
gi|419381390|ref|ZP_13922341.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC14C]
gi|419392240|ref|ZP_13933052.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15A]
gi|419397280|ref|ZP_13938048.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15B]
gi|419402622|ref|ZP_13943346.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15C]
gi|419407741|ref|ZP_13948430.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15D]
gi|419413324|ref|ZP_13953976.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15E]
gi|419862639|ref|ZP_14385233.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O103:H25 str. CVM9340]
gi|419875155|ref|ZP_14397035.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9534]
gi|419885225|ref|ZP_14406013.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9545]
gi|419895739|ref|ZP_14415524.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CVM9574]
gi|419902383|ref|ZP_14421609.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM9942]
gi|419906520|ref|ZP_14425421.1| putative oxidoreductase [Escherichia coli O26:H11 str. CVM10026]
gi|420089807|ref|ZP_14601587.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CVM9602]
gi|420095668|ref|ZP_14607148.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CVM9634]
gi|420104267|ref|ZP_14614992.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9455]
gi|420106403|ref|ZP_14616813.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9553]
gi|420117942|ref|ZP_14627286.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM10021]
gi|420121045|ref|ZP_14630188.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM10030]
gi|420128135|ref|ZP_14636696.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM10224]
gi|422351288|ref|ZP_16432110.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
117-3]
gi|422762388|ref|ZP_16816145.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E1167]
gi|422777439|ref|ZP_16831091.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H120]
gi|422988272|ref|ZP_16979045.1| hypothetical protein EUAG_03387 [Escherichia coli O104:H4 str.
C227-11]
gi|422995163|ref|ZP_16985927.1| hypothetical protein EUBG_02814 [Escherichia coli O104:H4 str.
C236-11]
gi|423000238|ref|ZP_16990992.1| hypothetical protein EUEG_02655 [Escherichia coli O104:H4 str.
09-7901]
gi|423003907|ref|ZP_16994653.1| hypothetical protein EUDG_01391 [Escherichia coli O104:H4 str.
04-8351]
gi|423010480|ref|ZP_17001214.1| hypothetical protein EUFG_02806 [Escherichia coli O104:H4 str.
11-3677]
gi|423019707|ref|ZP_17010416.1| hypothetical protein EUHG_02817 [Escherichia coli O104:H4 str.
11-4404]
gi|423024874|ref|ZP_17015571.1| hypothetical protein EUIG_02819 [Escherichia coli O104:H4 str.
11-4522]
gi|423030695|ref|ZP_17021383.1| hypothetical protein EUJG_01454 [Escherichia coli O104:H4 str.
11-4623]
gi|423038521|ref|ZP_17029195.1| hypothetical protein EUKG_02798 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423043640|ref|ZP_17034307.1| hypothetical protein EULG_02815 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423045369|ref|ZP_17036029.1| hypothetical protein EUMG_02387 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423053908|ref|ZP_17042715.1| hypothetical protein EUNG_03625 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423060883|ref|ZP_17049679.1| hypothetical protein EUOG_02823 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423706193|ref|ZP_17680576.1| hypothetical protein ESTG_00669 [Escherichia coli B799]
gi|424749022|ref|ZP_18177144.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CFSAN001629]
gi|424761516|ref|ZP_18189088.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424772587|ref|ZP_18199681.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CFSAN001632]
gi|425380179|ref|ZP_18764219.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli EC1865]
gi|429719752|ref|ZP_19254683.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-9450]
gi|429771634|ref|ZP_19303657.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02030]
gi|429781566|ref|ZP_19313495.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02033-1]
gi|429785306|ref|ZP_19317204.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02092]
gi|429791195|ref|ZP_19323052.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02093]
gi|429797022|ref|ZP_19328830.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02281]
gi|429798620|ref|ZP_19330421.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02318]
gi|429807133|ref|ZP_19338860.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02913]
gi|429812033|ref|ZP_19343719.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-03439]
gi|429817553|ref|ZP_19349194.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-04080]
gi|429822764|ref|ZP_19354362.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-03943]
gi|429904144|ref|ZP_19370123.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-9990]
gi|429908281|ref|ZP_19374245.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-9941]
gi|429914152|ref|ZP_19380100.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4984]
gi|429919183|ref|ZP_19385115.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-5604]
gi|429925002|ref|ZP_19390916.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4986]
gi|429928939|ref|ZP_19394841.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4987]
gi|429935478|ref|ZP_19401364.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4988]
gi|429941158|ref|ZP_19407032.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-5603]
gi|429943838|ref|ZP_19409701.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-6006]
gi|429951438|ref|ZP_19417284.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec12-0465]
gi|429954750|ref|ZP_19420582.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec12-0466]
gi|432377317|ref|ZP_19620308.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE12]
gi|432765543|ref|ZP_19999981.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE48]
gi|432832177|ref|ZP_20065751.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE135]
gi|432835136|ref|ZP_20068675.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE136]
gi|433092538|ref|ZP_20278805.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE138]
gi|209912863|dbj|BAG77937.1| putative oxidoreductase [Escherichia coli SE11]
gi|218352489|emb|CAU98266.1| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia coli 55989]
gi|257754768|dbj|BAI26270.1| predicted oxidoreductase [Escherichia coli O26:H11 str. 11368]
gi|257765204|dbj|BAI36699.1| predicted oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|300524792|gb|EFK45861.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
119-7]
gi|308123310|gb|EFO60572.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
145-7]
gi|323152182|gb|EFZ38472.1| hypothetical protein ECEPECA14_5792 [Escherichia coli EPECa14]
gi|323176958|gb|EFZ62548.1| hypothetical protein ECOK1180_4324 [Escherichia coli OK1180]
gi|323184231|gb|EFZ69608.1| hypothetical protein ECOK1357_2502 [Escherichia coli OK1357]
gi|323944962|gb|EGB41027.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H120]
gi|324020614|gb|EGB89833.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
117-3]
gi|324118014|gb|EGC11913.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
E1167]
gi|331064039|gb|EGI35950.1| putative oxidoreductase [Escherichia coli TA271]
gi|331074554|gb|EGI45874.1| putative oxidoreductase [Escherichia coli H591]
gi|340734336|gb|EGR63466.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 01-09591]
gi|340739623|gb|EGR73855.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. LB226692]
gi|341916817|gb|EGT66434.1| hypothetical protein C22711_0461 [Escherichia coli O104:H4 str.
C227-11]
gi|345338739|gb|EGW71166.1| hypothetical protein EC253486_3009 [Escherichia coli 2534-86]
gi|345350404|gb|EGW82679.1| hypothetical protein ECSTEC94C_2535 [Escherichia coli STEC_94C]
gi|354861998|gb|EHF22436.1| hypothetical protein EUBG_02814 [Escherichia coli O104:H4 str.
C236-11]
gi|354867283|gb|EHF27705.1| hypothetical protein EUAG_03387 [Escherichia coli O104:H4 str.
C227-11]
gi|354869354|gb|EHF29764.1| hypothetical protein EUDG_01391 [Escherichia coli O104:H4 str.
04-8351]
gi|354873209|gb|EHF33586.1| hypothetical protein EUEG_02655 [Escherichia coli O104:H4 str.
09-7901]
gi|354879963|gb|EHF40299.1| hypothetical protein EUFG_02806 [Escherichia coli O104:H4 str.
11-3677]
gi|354889387|gb|EHF49636.1| hypothetical protein EUHG_02817 [Escherichia coli O104:H4 str.
11-4404]
gi|354892982|gb|EHF53186.1| hypothetical protein EUIG_02819 [Escherichia coli O104:H4 str.
11-4522]
gi|354895119|gb|EHF55308.1| hypothetical protein EUKG_02798 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354897393|gb|EHF57551.1| hypothetical protein EUJG_01454 [Escherichia coli O104:H4 str.
11-4623]
gi|354898754|gb|EHF58905.1| hypothetical protein EULG_02815 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354912805|gb|EHF72803.1| hypothetical protein EUOG_02823 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354915810|gb|EHF75786.1| hypothetical protein EUMG_02387 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354917725|gb|EHF77687.1| hypothetical protein EUNG_03625 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|378047136|gb|EHW09508.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC8A]
gi|378054088|gb|EHW16374.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8C]
gi|378062678|gb|EHW24855.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8D]
gi|378065454|gb|EHW27599.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8E]
gi|378074846|gb|EHW36875.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9A]
gi|378077623|gb|EHW39617.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9B]
gi|378084297|gb|EHW46209.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9C]
gi|378090942|gb|EHW52777.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9D]
gi|378095275|gb|EHW57063.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC9E]
gi|378100492|gb|EHW62188.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10A]
gi|378106755|gb|EHW68383.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10B]
gi|378111607|gb|EHW73191.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10C]
gi|378116694|gb|EHW78214.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10D]
gi|378132001|gb|EHW93354.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10F]
gi|378227757|gb|EHX87925.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC14C]
gi|378237440|gb|EHX97463.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15A]
gi|378243401|gb|EHY03347.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15B]
gi|378247156|gb|EHY07075.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15C]
gi|378254120|gb|EHY13984.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15D]
gi|378258756|gb|EHY18572.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC15E]
gi|385712077|gb|EIG49032.1| hypothetical protein ESTG_00669 [Escherichia coli B799]
gi|386175064|gb|EIH47056.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
99.0741]
gi|386191090|gb|EIH79836.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
4.0522]
gi|386200999|gb|EIH99989.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
96.154]
gi|386227665|gb|EII55021.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3.3884]
gi|386258159|gb|EIJ13641.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
900105 (10e)]
gi|388344779|gb|EIL10603.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O103:H25 str. CVM9340]
gi|388349524|gb|EIL15002.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9534]
gi|388350760|gb|EIL16086.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9545]
gi|388360060|gb|EIL24307.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CVM9574]
gi|388374111|gb|EIL37313.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM9942]
gi|388379006|gb|EIL41698.1| putative oxidoreductase [Escherichia coli O26:H11 str. CVM10026]
gi|394386318|gb|EJE63824.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM10224]
gi|394387017|gb|EJE64487.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CVM9602]
gi|394391776|gb|EJE68605.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CVM9634]
gi|394401383|gb|EJE77196.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM10021]
gi|394404626|gb|EJE79977.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9455]
gi|394416216|gb|EJE90023.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CVM9553]
gi|394427279|gb|EJE99994.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CVM10030]
gi|406777008|gb|AFS56432.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407053596|gb|AFS73647.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 2011C-3493]
gi|407066073|gb|AFS87120.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408296546|gb|EKJ14772.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli EC1865]
gi|421938138|gb|EKT95725.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O111:H8
str. CFSAN001632]
gi|421943058|gb|EKU00356.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli O26:H11
str. CFSAN001629]
gi|421943536|gb|EKU00819.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli
O111:H11 str. CFSAN001630]
gi|429346143|gb|EKY82924.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02033-1]
gi|429348895|gb|EKY85651.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02092]
gi|429361117|gb|EKY97774.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02030]
gi|429362548|gb|EKY99195.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02093]
gi|429362819|gb|EKY99464.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02281]
gi|429365937|gb|EKZ02549.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02318]
gi|429376792|gb|EKZ13320.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-02913]
gi|429379266|gb|EKZ15767.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-03439]
gi|429380834|gb|EKZ17323.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-03943]
gi|429393055|gb|EKZ29454.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. 11-04080]
gi|429405156|gb|EKZ41422.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4984]
gi|429406922|gb|EKZ43176.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-9990]
gi|429410670|gb|EKZ46891.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-9450]
gi|429414382|gb|EKZ50557.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4987]
gi|429420991|gb|EKZ57113.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4986]
gi|429429325|gb|EKZ65394.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-5604]
gi|429432012|gb|EKZ68052.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-4988]
gi|429436218|gb|EKZ72234.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-5603]
gi|429438423|gb|EKZ74416.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-6006]
gi|429448045|gb|EKZ83962.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec12-0465]
gi|429451763|gb|EKZ87651.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec11-9941]
gi|429457707|gb|EKZ93545.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O104:H4 str. Ec12-0466]
gi|430898616|gb|ELC20749.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE12]
gi|431309718|gb|ELF97911.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE48]
gi|431376147|gb|ELG61470.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE135]
gi|431385496|gb|ELG69483.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE136]
gi|431609868|gb|ELI79173.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE138]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|425305867|ref|ZP_18695578.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli N1]
gi|408228492|gb|EKI52026.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli N1]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|300902205|ref|ZP_07120205.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
84-1]
gi|301306536|ref|ZP_07212600.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
124-1]
gi|415863775|ref|ZP_11536979.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
85-1]
gi|417639879|ref|ZP_12290022.1| hypothetical protein ECTX1999_2587 [Escherichia coli TX1999]
gi|419170801|ref|ZP_13714687.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC7A]
gi|419181440|ref|ZP_13725054.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC7C]
gi|419186885|ref|ZP_13730399.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC7D]
gi|419192176|ref|ZP_13735630.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC7E]
gi|420386192|ref|ZP_14885543.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli EPECa12]
gi|427805259|ref|ZP_18972326.1| putative oxidoreductase [Escherichia coli chi7122]
gi|427809818|ref|ZP_18976883.1| putative oxidoreductase [Escherichia coli]
gi|433130718|ref|ZP_20316154.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE163]
gi|433135380|ref|ZP_20320725.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE166]
gi|443618202|ref|YP_007382058.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli APEC
O78]
gi|300405724|gb|EFJ89262.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
84-1]
gi|300838237|gb|EFK65997.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
124-1]
gi|315255342|gb|EFU35310.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
85-1]
gi|345393371|gb|EGX23147.1| hypothetical protein ECTX1999_2587 [Escherichia coli TX1999]
gi|378014845|gb|EHV77742.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC7A]
gi|378023688|gb|EHV86360.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC7C]
gi|378028877|gb|EHV91493.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC7D]
gi|378038705|gb|EHW01214.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC7E]
gi|391305259|gb|EIQ63050.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli EPECa12]
gi|412963441|emb|CCK47366.1| putative oxidoreductase [Escherichia coli chi7122]
gi|412969997|emb|CCJ44640.1| putative oxidoreductase [Escherichia coli]
gi|431645951|gb|ELJ13491.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE163]
gi|431656367|gb|ELJ23353.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE166]
gi|443422710|gb|AGC87614.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli APEC
O78]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K+ K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGM-EIYQPGTKM---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|442592255|ref|ZP_21010235.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441608408|emb|CCP99261.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417231692|ref|ZP_12033090.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
5.0959]
gi|386204691|gb|EII09202.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
5.0959]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|432862741|ref|ZP_20087030.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE146]
gi|431404780|gb|ELG88026.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE146]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNLGY-DVTIYEKE 156
>gi|417708181|ref|ZP_12357214.1| hypothetical protein SFVA6_2999 [Shigella flexneri VA-6]
gi|420332044|ref|ZP_14833700.1| hypothetical protein SFK1770_3173 [Shigella flexneri K-1770]
gi|333001281|gb|EGK20849.1| hypothetical protein SFVA6_2999 [Shigella flexneri VA-6]
gi|391250939|gb|EIQ10158.1| hypothetical protein SFK1770_3173 [Shigella flexneri K-1770]
Length = 233
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|300918786|ref|ZP_07135355.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
115-1]
gi|419922180|ref|ZP_14440202.1| putative oxidoreductase [Escherichia coli 541-15]
gi|300414029|gb|EFJ97339.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
115-1]
gi|388396756|gb|EIL57830.1| putative oxidoreductase [Escherichia coli 541-15]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|386619763|ref|YP_006139343.1| putative oxidoreductase [Escherichia coli NA114]
gi|387830081|ref|YP_003350018.1| putative oxidoreductase [Escherichia coli SE15]
gi|432422494|ref|ZP_19665039.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE178]
gi|432500634|ref|ZP_19742391.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE216]
gi|432559397|ref|ZP_19796066.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE49]
gi|432695009|ref|ZP_19930208.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE162]
gi|432711198|ref|ZP_19946258.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE6]
gi|432919611|ref|ZP_20123725.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE173]
gi|432927513|ref|ZP_20128942.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE175]
gi|432981576|ref|ZP_20170351.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE211]
gi|433097018|ref|ZP_20283202.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE139]
gi|433106440|ref|ZP_20292415.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE148]
gi|281179238|dbj|BAI55568.1| putative oxidoreductase [Escherichia coli SE15]
gi|333970264|gb|AEG37069.1| putative oxidoreductase [Escherichia coli NA114]
gi|430944106|gb|ELC64205.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE178]
gi|431028211|gb|ELD41255.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE216]
gi|431090617|gb|ELD96368.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE49]
gi|431233591|gb|ELF29178.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE162]
gi|431248878|gb|ELF43053.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE6]
gi|431443655|gb|ELH24681.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE173]
gi|431444036|gb|ELH25060.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE175]
gi|431490885|gb|ELH70492.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE211]
gi|431615366|gb|ELI84495.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE139]
gi|431627147|gb|ELI95558.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE148]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|417213558|ref|ZP_12022599.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
JB1-95]
gi|419204070|ref|ZP_13747253.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8B]
gi|378048790|gb|EHW11143.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC8B]
gi|386194254|gb|EIH88510.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
JB1-95]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCAKVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|417618739|ref|ZP_12269153.1| hypothetical protein ECG581_2545 [Escherichia coli G58-1]
gi|345375453|gb|EGX07400.1| hypothetical protein ECG581_2545 [Escherichia coli G58-1]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|425289149|ref|ZP_18679997.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 3006]
gi|408213701|gb|EKI38180.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 3006]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|227887201|ref|ZP_04005006.1| oxidoreductase [Escherichia coli 83972]
gi|227835551|gb|EEJ46017.1| oxidoreductase [Escherichia coli 83972]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PINIG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPINIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TI+EK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIHEKE 156
>gi|82543533|ref|YP_407480.1| oxidoreductase [Shigella boydii Sb227]
gi|416294012|ref|ZP_11650633.1| putative oxidoreductase [Shigella flexneri CDC 796-83]
gi|417680988|ref|ZP_12330367.1| hypothetical protein SB359474_0726 [Shigella boydii 3594-74]
gi|420324687|ref|ZP_14826467.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri CCH060]
gi|420351708|ref|ZP_14852891.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella boydii 4444-74]
gi|421683127|ref|ZP_16122924.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Shigella
flexneri 1485-80]
gi|81244944|gb|ABB65652.1| putative oxidoreductase [Shigella boydii Sb227]
gi|320186775|gb|EFW61497.1| putative oxidoreductase [Shigella flexneri CDC 796-83]
gi|332097453|gb|EGJ02433.1| hypothetical protein SB359474_0726 [Shigella boydii 3594-74]
gi|391255775|gb|EIQ14916.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri CCH060]
gi|391287043|gb|EIQ45576.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella boydii 4444-74]
gi|404339181|gb|EJZ65619.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Shigella
flexneri 1485-80]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432432435|ref|ZP_19674864.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE187]
gi|432845117|ref|ZP_20077950.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE141]
gi|433208322|ref|ZP_20391996.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE97]
gi|430952860|gb|ELC71774.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE187]
gi|431394539|gb|ELG78072.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE141]
gi|431729607|gb|ELJ93226.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE97]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|91211432|ref|YP_541418.1| oxidoreductase [Escherichia coli UTI89]
gi|117624347|ref|YP_853260.1| oxidoreductase [Escherichia coli APEC O1]
gi|218559064|ref|YP_002391977.1| oxidoreductase [Escherichia coli S88]
gi|237704611|ref|ZP_04535092.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|386600024|ref|YP_006101530.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
IHE3034]
gi|386603829|ref|YP_006110129.1| putative oxidoreductase [Escherichia coli UM146]
gi|417085408|ref|ZP_11952836.1| putative oxidoreductase [Escherichia coli cloneA_i1]
gi|417286646|ref|ZP_12073935.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
TW07793]
gi|419947077|ref|ZP_14463439.1| putative oxidoreductase [Escherichia coli HM605]
gi|422360421|ref|ZP_16441055.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
110-3]
gi|422749427|ref|ZP_16803339.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H252]
gi|422755567|ref|ZP_16809391.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H263]
gi|422837798|ref|ZP_16885771.1| hypothetical protein ESPG_00457 [Escherichia coli H397]
gi|432358491|ref|ZP_19601717.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE4]
gi|432363225|ref|ZP_19606392.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE5]
gi|432574227|ref|ZP_19810707.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE55]
gi|432588475|ref|ZP_19824831.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE58]
gi|432598134|ref|ZP_19834410.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE62]
gi|432754962|ref|ZP_19989512.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE22]
gi|432779087|ref|ZP_20013330.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE59]
gi|432788034|ref|ZP_20022166.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE65]
gi|432821483|ref|ZP_20055175.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE118]
gi|432827615|ref|ZP_20061267.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE123]
gi|432895165|ref|ZP_20106885.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE165]
gi|433005605|ref|ZP_20194034.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE227]
gi|433008188|ref|ZP_20196605.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE229]
gi|433154267|ref|ZP_20339210.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE176]
gi|433164022|ref|ZP_20348760.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE179]
gi|433169127|ref|ZP_20353755.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE180]
gi|91073006|gb|ABE07887.1| hypothetical oxidoreductase YeiT [Escherichia coli UTI89]
gi|115513471|gb|ABJ01546.1| putative oxidoreductase YeiT [Escherichia coli APEC O1]
gi|218365833|emb|CAR03574.1| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia coli S88]
gi|226900977|gb|EEH87236.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294493669|gb|ADE92425.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
IHE3034]
gi|307626313|gb|ADN70617.1| putative oxidoreductase [Escherichia coli UM146]
gi|315285783|gb|EFU45223.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
110-3]
gi|323951942|gb|EGB47816.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H252]
gi|323955911|gb|EGB51664.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
H263]
gi|355351180|gb|EHG00372.1| putative oxidoreductase [Escherichia coli cloneA_i1]
gi|371610707|gb|EHN99235.1| hypothetical protein ESPG_00457 [Escherichia coli H397]
gi|386250105|gb|EII96274.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
TW07793]
gi|388411514|gb|EIL71683.1| putative oxidoreductase [Escherichia coli HM605]
gi|430877146|gb|ELC00602.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE4]
gi|430886444|gb|ELC09299.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE5]
gi|431107825|gb|ELE11989.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE55]
gi|431120808|gb|ELE23806.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE58]
gi|431131001|gb|ELE33084.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE62]
gi|431302171|gb|ELF91359.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE22]
gi|431327240|gb|ELG14585.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE59]
gi|431337751|gb|ELG24839.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE65]
gi|431368330|gb|ELG54798.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE118]
gi|431372864|gb|ELG58526.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE123]
gi|431421532|gb|ELH03744.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE165]
gi|431514592|gb|ELH92433.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE227]
gi|431523518|gb|ELI00655.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE229]
gi|431674157|gb|ELJ40340.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE176]
gi|431687327|gb|ELJ52878.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE179]
gi|431687979|gb|ELJ53520.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE180]
Length = 412
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|215487367|ref|YP_002329798.1| oxidoreductase [Escherichia coli O127:H6 str. E2348/69]
gi|312967439|ref|ZP_07781654.1| uncharacterized oxidoreductase yeiT [Escherichia coli 2362-75]
gi|417756399|ref|ZP_12404474.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2B]
gi|418997645|ref|ZP_13545239.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1A]
gi|419002686|ref|ZP_13550213.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1B]
gi|419008381|ref|ZP_13555812.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1C]
gi|419014062|ref|ZP_13561413.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC1D]
gi|419019065|ref|ZP_13566372.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1E]
gi|419024565|ref|ZP_13571791.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC2A]
gi|419029606|ref|ZP_13576769.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2C]
gi|419035197|ref|ZP_13582283.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2D]
gi|419040293|ref|ZP_13587321.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2E]
gi|215265439|emb|CAS09840.1| predicted oxidoreductase [Escherichia coli O127:H6 str. E2348/69]
gi|312287636|gb|EFR15541.1| uncharacterized oxidoreductase yeiT [Escherichia coli 2362-75]
gi|377843472|gb|EHU08512.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1A]
gi|377843899|gb|EHU08936.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1C]
gi|377847565|gb|EHU12563.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1B]
gi|377857400|gb|EHU22251.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC1D]
gi|377860119|gb|EHU24945.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC1E]
gi|377863349|gb|EHU28154.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Escherichia coli DEC2A]
gi|377873815|gb|EHU38446.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2B]
gi|377877788|gb|EHU42377.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2C]
gi|377879553|gb|EHU44125.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2D]
gi|377890333|gb|EHU54790.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC2E]
Length = 412
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKK 156
>gi|110642355|ref|YP_670085.1| oxidoreductase [Escherichia coli 536]
gi|191169939|ref|ZP_03031493.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli F11]
gi|331658225|ref|ZP_08359187.1| putative oxidoreductase [Escherichia coli TA206]
gi|422370293|ref|ZP_16450687.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
16-3]
gi|422374736|ref|ZP_16455011.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
60-1]
gi|432397975|ref|ZP_19640756.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE25]
gi|432407203|ref|ZP_19649912.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE28]
gi|432466240|ref|ZP_19708329.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE205]
gi|432471513|ref|ZP_19713559.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE206]
gi|432584403|ref|ZP_19820797.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE57]
gi|432713925|ref|ZP_19948965.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE8]
gi|432723599|ref|ZP_19958519.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE17]
gi|432728186|ref|ZP_19963065.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE18]
gi|432741880|ref|ZP_19976599.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE23]
gi|432802364|ref|ZP_20036343.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE84]
gi|432899166|ref|ZP_20109858.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE192]
gi|432991187|ref|ZP_20179851.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE217]
gi|433029123|ref|ZP_20216982.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE109]
gi|433073339|ref|ZP_20259994.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE129]
gi|433078323|ref|ZP_20264861.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE131]
gi|433111398|ref|ZP_20297263.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE150]
gi|433120745|ref|ZP_20306417.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE157]
gi|433183811|ref|ZP_20368062.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE85]
gi|110343947|gb|ABG70184.1| hypothetical oxidoreductase YeiT [Escherichia coli 536]
gi|190909455|gb|EDV69040.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli F11]
gi|315297990|gb|EFU57260.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
16-3]
gi|324013973|gb|EGB83192.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
60-1]
gi|331056473|gb|EGI28482.1| putative oxidoreductase [Escherichia coli TA206]
gi|430916079|gb|ELC37157.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE25]
gi|430929962|gb|ELC50471.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE28]
gi|430993824|gb|ELD10168.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE205]
gi|430997902|gb|ELD14151.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE206]
gi|431115762|gb|ELE19256.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE57]
gi|431256702|gb|ELF49637.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE8]
gi|431266153|gb|ELF57715.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE17]
gi|431273875|gb|ELF64949.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE18]
gi|431283571|gb|ELF74430.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE23]
gi|431348153|gb|ELG35011.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE84]
gi|431426818|gb|ELH08862.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE192]
gi|431495269|gb|ELH74855.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE217]
gi|431542863|gb|ELI17859.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE109]
gi|431588050|gb|ELI59398.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE129]
gi|431596553|gb|ELI66505.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE131]
gi|431628702|gb|ELI97078.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE150]
gi|431642346|gb|ELJ10069.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE157]
gi|431706373|gb|ELJ70944.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE85]
Length = 412
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|300981479|ref|ZP_07175560.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
200-1]
gi|300307552|gb|EFJ62072.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
200-1]
Length = 412
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|419278601|ref|ZP_13820850.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10E]
gi|419376048|ref|ZP_13917073.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC14B]
gi|378128817|gb|EHW90198.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC10E]
gi|378220135|gb|EHX80401.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC14B]
Length = 317
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|432593412|ref|ZP_19829729.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE60]
gi|431127512|gb|ELE29812.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE60]
Length = 412
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
N+ D T + A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I
Sbjct: 4 QNYLDELTTAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETI 63
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+N LG C VCPT LC GC A + PI+IG LQ+F T+ + G+ +P
Sbjct: 64 RENNALGAVCARVCPTEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTK 122
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ K+A+IG GPA L + L+ GY D+TI+EK
Sbjct: 123 TLG----KVAIIGAGPAGLQASVTLTNQGY-DVTIHEKE 156
>gi|387612723|ref|YP_006115839.1| putative oxidoreductase [Escherichia coli ETEC H10407]
gi|419175800|ref|ZP_13719638.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC7B]
gi|309702459|emb|CBJ01785.1| putative oxidoreductase [Escherichia coli ETEC H10407]
gi|378033203|gb|EHV95783.1| NADH-dependent dihydropyrimidine dehydrogenase subunit [Escherichia
coli DEC7B]
Length = 412
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q + FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTEPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|300935068|ref|ZP_07150099.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
21-1]
gi|432680755|ref|ZP_19916129.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE143]
gi|300459649|gb|EFK23142.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
21-1]
gi|431220152|gb|ELF17532.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE143]
Length = 412
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432602707|ref|ZP_19838951.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE66]
gi|431141281|gb|ELE43046.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE66]
Length = 412
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|301021089|ref|ZP_07185130.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
69-1]
gi|419920696|ref|ZP_14438807.1| putative oxidoreductase [Escherichia coli KD2]
gi|300398270|gb|EFJ81808.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
69-1]
gi|388384323|gb|EIL46057.1| putative oxidoreductase [Escherichia coli KD2]
Length = 412
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|170683988|ref|YP_001744340.1| putative oxidoreductase [Escherichia coli SMS-3-5]
gi|170521706|gb|ACB19884.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
SMS-3-5]
Length = 412
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432543754|ref|ZP_19780597.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE236]
gi|432549244|ref|ZP_19786012.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE237]
gi|432622397|ref|ZP_19858428.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE76]
gi|432815885|ref|ZP_20049669.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE115]
gi|431074164|gb|ELD81728.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE236]
gi|431079522|gb|ELD86476.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE237]
gi|431159197|gb|ELE59754.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE76]
gi|431364109|gb|ELG50653.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE115]
Length = 412
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|293410505|ref|ZP_06654081.1| conserved hypothetical protein [Escherichia coli B354]
gi|291470973|gb|EFF13457.1| conserved hypothetical protein [Escherichia coli B354]
Length = 412
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432851437|ref|ZP_20081822.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE144]
gi|431399775|gb|ELG83165.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE144]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432771109|ref|ZP_20005448.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE50]
gi|431314806|gb|ELG02738.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE50]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|331673674|ref|ZP_08374437.1| putative oxidoreductase [Escherichia coli TA280]
gi|331068947|gb|EGI40339.1| putative oxidoreductase [Escherichia coli TA280]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMKIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432617214|ref|ZP_19853329.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE75]
gi|431154155|gb|ELE54977.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE75]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|218700618|ref|YP_002408247.1| putative oxidoreductase [Escherichia coli IAI39]
gi|386624841|ref|YP_006144569.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O7:K1 str. CE10]
gi|422830167|ref|ZP_16878328.1| hypothetical protein ESNG_02833 [Escherichia coli B093]
gi|218370604|emb|CAR18411.1| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia coli IAI39]
gi|349738578|gb|AEQ13284.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli O7:K1 str. CE10]
gi|371606857|gb|EHN95447.1| hypothetical protein ESNG_02833 [Escherichia coli B093]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|422972127|ref|ZP_16975179.1| hypothetical protein ESRG_01813 [Escherichia coli TA124]
gi|371598008|gb|EHN86823.1| hypothetical protein ESRG_01813 [Escherichia coli TA124]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432869515|ref|ZP_20090108.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE147]
gi|431410101|gb|ELG93263.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE147]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432719269|ref|ZP_19954238.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE9]
gi|432793361|ref|ZP_20027445.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE78]
gi|432799319|ref|ZP_20033341.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE79]
gi|431263081|gb|ELF55070.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE9]
gi|431339024|gb|ELG26086.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE78]
gi|431343185|gb|ELG30149.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE79]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|422334395|ref|ZP_16415402.1| hypothetical protein HMPREF0986_03896 [Escherichia coli 4_1_47FAA]
gi|432392660|ref|ZP_19635490.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE21]
gi|432962315|ref|ZP_20151968.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE202]
gi|433063609|ref|ZP_20250532.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE125]
gi|373244621|gb|EHP64102.1| hypothetical protein HMPREF0986_03896 [Escherichia coli 4_1_47FAA]
gi|430917816|gb|ELC38855.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE21]
gi|431474106|gb|ELH53928.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE202]
gi|431581603|gb|ELI54050.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE125]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|218705674|ref|YP_002413193.1| putative oxidoreductase [Escherichia coli UMN026]
gi|293405614|ref|ZP_06649606.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298381295|ref|ZP_06990894.1| oxidoreductase yeiT [Escherichia coli FVEC1302]
gi|300897798|ref|ZP_07116191.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
198-1]
gi|331663648|ref|ZP_08364558.1| putative oxidoreductase [Escherichia coli TA143]
gi|417587140|ref|ZP_12237911.1| hypothetical protein ECSTECC16502_2777 [Escherichia coli
STEC_C165-02]
gi|419932786|ref|ZP_14450071.1| putative oxidoreductase [Escherichia coli 576-1]
gi|432354086|ref|ZP_19597359.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE2]
gi|432402438|ref|ZP_19645190.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE26]
gi|432426702|ref|ZP_19669203.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE181]
gi|432461168|ref|ZP_19703317.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE204]
gi|432476375|ref|ZP_19718374.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE208]
gi|432489823|ref|ZP_19731697.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE213]
gi|432518217|ref|ZP_19755405.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE228]
gi|432538338|ref|ZP_19775240.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE235]
gi|432631933|ref|ZP_19867859.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE80]
gi|432641647|ref|ZP_19877481.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE83]
gi|432666542|ref|ZP_19902123.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE116]
gi|432775231|ref|ZP_20009510.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE54]
gi|432839831|ref|ZP_20073317.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE140]
gi|432887128|ref|ZP_20101202.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE158]
gi|432913326|ref|ZP_20119023.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE190]
gi|433019215|ref|ZP_20207436.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE105]
gi|433053755|ref|ZP_20240935.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE122]
gi|433068460|ref|ZP_20255250.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE128]
gi|433159189|ref|ZP_20344027.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE177]
gi|433179002|ref|ZP_20363402.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE82]
gi|433203764|ref|ZP_20387540.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE95]
gi|218432771|emb|CAR13665.1| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia coli UMN026]
gi|291427822|gb|EFF00849.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298278737|gb|EFI20251.1| oxidoreductase yeiT [Escherichia coli FVEC1302]
gi|300358513|gb|EFJ74383.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
198-1]
gi|331059447|gb|EGI31424.1| putative oxidoreductase [Escherichia coli TA143]
gi|345336768|gb|EGW69202.1| hypothetical protein ECSTECC16502_2777 [Escherichia coli
STEC_C165-02]
gi|388415729|gb|EIL75649.1| putative oxidoreductase [Escherichia coli 576-1]
gi|430875259|gb|ELB98801.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE2]
gi|430924909|gb|ELC45582.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE26]
gi|430955634|gb|ELC74416.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE181]
gi|430988858|gb|ELD05327.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE204]
gi|431005543|gb|ELD20564.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE208]
gi|431020440|gb|ELD33785.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE213]
gi|431050839|gb|ELD60515.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE228]
gi|431069227|gb|ELD77556.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE235]
gi|431170133|gb|ELE70327.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE80]
gi|431181530|gb|ELE81392.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE83]
gi|431200836|gb|ELE99554.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE116]
gi|431318270|gb|ELG06036.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE54]
gi|431389004|gb|ELG72719.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE140]
gi|431416126|gb|ELG98613.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE158]
gi|431439626|gb|ELH20959.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE190]
gi|431531116|gb|ELI07785.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE105]
gi|431570155|gb|ELI43081.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE122]
gi|431584087|gb|ELI56074.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE128]
gi|431677828|gb|ELJ43841.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE177]
gi|431701367|gb|ELJ66286.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE82]
gi|431721313|gb|ELJ85308.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE95]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|387607831|ref|YP_006096687.1| putative oxidoreductase [Escherichia coli 042]
gi|284922131|emb|CBG35212.1| putative oxidoreductase [Escherichia coli 042]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|170767326|ref|ZP_02901779.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia albertii
TW07627]
gi|170123660|gb|EDS92591.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia albertii
TW07627]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC +E PI+IG LQ+F T+ F+ +I P +K K+A+IG G
Sbjct: 79 TEKLCQSGCTRAGVDE-PIDIGRLQRFVTD-FEQQTKMEIYQPGSKT---LGKVAVIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|417138860|ref|ZP_11982387.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
97.0259]
gi|417308607|ref|ZP_12095451.1| putative oxidoreductase [Escherichia coli PCN033]
gi|338769794|gb|EGP24570.1| putative oxidoreductase [Escherichia coli PCN033]
gi|386157505|gb|EIH13845.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
97.0259]
Length = 412
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|392955833|ref|ZP_10321363.1| dihydropyrimidine dehydrogenase subunit A [Bacillus macauensis
ZFHKF-1]
gi|391878075|gb|EIT86665.1| dihydropyrimidine dehydrogenase subunit A [Bacillus macauensis
ZFHKF-1]
Length = 455
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 105/178 (58%), Gaps = 17/178 (9%)
Query: 17 SLVNNFDDIKHTT--LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
SLVN D+ + L++ A EA+RCL C DAPC +CPT I+I SFI SI+ N G
Sbjct: 9 SLVNVSDNFREVECGLTDVEASDEANRCLYCYDAPCITACPTSINIPSFIKSIATTNVKG 68
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
AAK I + NP+G +C VCPT +LC G C L + + PI IG LQ++AT D + +
Sbjct: 69 AAKTIMTANPIGASCARVCPTEELCEGACVLNHSSK-PILIGKLQRYAT----DWAMKR- 122
Query: 135 RPPDAKVDFPDTK-IALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVT 184
P K P+ + +A++G GPA LS A L+R GY +TIYE NTY +V+
Sbjct: 123 NEPLFKAGEPNGRSVAIVGSGPAGLSAARELARFGY-KVTIYEAKSEAGGLNTYGIVS 179
>gi|415840672|ref|ZP_11522100.1| hypothetical protein ECRN5871_3886 [Escherichia coli RN587/1]
gi|417282050|ref|ZP_12069350.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3003]
gi|425278439|ref|ZP_18669685.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli ARS4.2123]
gi|323188129|gb|EFZ73424.1| hypothetical protein ECRN5871_3886 [Escherichia coli RN587/1]
gi|386246379|gb|EII88109.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli
3003]
gi|408202016|gb|EKI27150.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli ARS4.2123]
Length = 412
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|331647797|ref|ZP_08348889.1| putative oxidoreductase [Escherichia coli M605]
gi|416335332|ref|ZP_11672025.1| putative oxidoreductase [Escherichia coli WV_060327]
gi|417662761|ref|ZP_12312342.1| pyridine nucleotide-bisulfide oxidoreductase family protein
[Escherichia coli AA86]
gi|320196015|gb|EFW70639.1| putative oxidoreductase [Escherichia coli WV_060327]
gi|330911979|gb|EGH40489.1| pyridine nucleotide-bisulfide oxidoreductase family protein
[Escherichia coli AA86]
gi|331043521|gb|EGI15659.1| putative oxidoreductase [Escherichia coli M605]
Length = 412
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|432554236|ref|ZP_19790959.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE47]
gi|431084041|gb|ELD90212.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE47]
Length = 412
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|422382278|ref|ZP_16462439.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
57-2]
gi|432732881|ref|ZP_19967714.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE45]
gi|432759967|ref|ZP_19994461.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE46]
gi|324006547|gb|EGB75766.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
57-2]
gi|431276068|gb|ELF67095.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE45]
gi|431307621|gb|ELF95911.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE46]
Length = 412
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|306814739|ref|ZP_07448901.1| putative oxidoreductase [Escherichia coli NC101]
gi|419700983|ref|ZP_14228585.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli SCI-07]
gi|432381887|ref|ZP_19624830.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE15]
gi|432387699|ref|ZP_19630588.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE16]
gi|432441643|ref|ZP_19683983.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE189]
gi|432446757|ref|ZP_19689056.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE191]
gi|432514449|ref|ZP_19751673.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE224]
gi|432611956|ref|ZP_19848118.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE72]
gi|432646718|ref|ZP_19882508.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE86]
gi|432656301|ref|ZP_19892005.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE93]
gi|432699578|ref|ZP_19934732.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE169]
gi|432746189|ref|ZP_19980855.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE43]
gi|432905406|ref|ZP_20114273.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE194]
gi|432938498|ref|ZP_20136776.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE183]
gi|432972350|ref|ZP_20161217.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE207]
gi|432985906|ref|ZP_20174629.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE215]
gi|433014412|ref|ZP_20202760.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE104]
gi|433024030|ref|ZP_20212018.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE106]
gi|433039147|ref|ZP_20226746.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE113]
gi|433083105|ref|ZP_20269562.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE133]
gi|433101693|ref|ZP_20287779.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE145]
gi|433144737|ref|ZP_20329881.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE168]
gi|433188930|ref|ZP_20373028.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE88]
gi|433323623|ref|ZP_20400954.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli J96]
gi|305852133|gb|EFM52585.1| putative oxidoreductase [Escherichia coli NC101]
gi|380347729|gb|EIA36015.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli SCI-07]
gi|430906347|gb|ELC27947.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE16]
gi|430907362|gb|ELC28860.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE15]
gi|430966097|gb|ELC83505.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE189]
gi|430973030|gb|ELC89998.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE191]
gi|431041845|gb|ELD52340.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE224]
gi|431148130|gb|ELE49421.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE72]
gi|431180755|gb|ELE80642.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE86]
gi|431190771|gb|ELE90157.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE93]
gi|431243327|gb|ELF37714.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE169]
gi|431291228|gb|ELF81741.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE43]
gi|431432641|gb|ELH14318.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE194]
gi|431463233|gb|ELH43426.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE183]
gi|431481852|gb|ELH61559.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE207]
gi|431500143|gb|ELH79159.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE215]
gi|431530510|gb|ELI07189.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE104]
gi|431535723|gb|ELI12062.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE106]
gi|431551247|gb|ELI25233.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE113]
gi|431601997|gb|ELI71506.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE133]
gi|431619287|gb|ELI88211.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE145]
gi|431661432|gb|ELJ28245.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE168]
gi|431705636|gb|ELJ70226.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE88]
gi|432347721|gb|ELL42178.1| dihydropyrimidine dehydrogenase subunit A [Escherichia coli J96]
Length = 412
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|218690295|ref|YP_002398507.1| putative oxidoreductase [Escherichia coli ED1a]
gi|222156902|ref|YP_002557041.1| oxidoreductase yeiT [Escherichia coli LF82]
gi|419914402|ref|ZP_14432800.1| putative oxidoreductase [Escherichia coli KD1]
gi|218427859|emb|CAR08774.2| putative Fe-S cluster containing oxidoreductase subunit
[Escherichia coli ED1a]
gi|222033907|emb|CAP76648.1| Uncharacterized oxidoreductase yeiT [Escherichia coli LF82]
gi|388386673|gb|EIL48313.1| putative oxidoreductase [Escherichia coli KD1]
Length = 412
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|425300984|ref|ZP_18690882.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 07798]
gi|408213370|gb|EKI37855.1| NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
[Escherichia coli 07798]
Length = 412
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|419386695|ref|ZP_13927573.1| NADH-dependent dihydropyrimidine dehydrogenase subunit domain
protein [Escherichia coli DEC14D]
gi|378231222|gb|EHX91333.1| NADH-dependent dihydropyrimidine dehydrogenase subunit domain
protein [Escherichia coli DEC14D]
Length = 191
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|432750632|ref|ZP_19985236.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE29]
gi|431296614|gb|ELF86325.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE29]
Length = 412
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C D PC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDTPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|237748006|ref|ZP_04578486.1| dihydropyrimidine dehydrogenase [Oxalobacter formigenes OXCC13]
gi|229379368|gb|EEO29459.1| dihydropyrimidine dehydrogenase [Oxalobacter formigenes OXCC13]
Length = 404
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 92/147 (62%), Gaps = 6/147 (4%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R AL EASRCL C DAPC ++CP D FI S+ KN +GAA+ I +NPLG +C +V
Sbjct: 20 RTALAEASRCLLCHDAPCSEACPAGTDPARFIRSLRFKNIWGAAETIRENNPLGGSCALV 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP ++LC C + A + P+ I LQ+F TE + MG+ ++ F +A IG
Sbjct: 80 CPVNELCESAC-VRAGLDQPVRIAKLQRFVTEQERKMGMQILKTG----PFNGKTVACIG 134
Query: 153 CGPASLSCATFLSRMGYDDITIYEKNT 179
GPASL+CA+ L++ GY +TI+E+++
Sbjct: 135 AGPASLACASVLAQQGY-HVTIFEQSS 160
>gi|56419956|ref|YP_147274.1| oxidoreductase [Geobacillus kaustophilus HTA426]
gi|56379798|dbj|BAD75706.1| glutamate synthasesmall subunit [Geobacillus kaustophilus HTA426]
Length = 449
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 24/184 (13%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF++++ L++R A++EA+RCL C DAPC ++CPT IDI +FI I+ N G+AK
Sbjct: 6 LEKNFEEVE-PGLTDREAMEEANRCLYCYDAPCIRACPTGIDIPAFIKKIASGNVKGSAK 64
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I
Sbjct: 65 TIMLSNPVGASCARVCPTEELCEGACVLNHSTK-PIMIGKLQRYAT----DWAIR----- 114
Query: 138 DAKVDFPDTK-----IALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTN 185
+ +V F + +A++G GPA LS A L+R+GY ++TI+E NTY +V+
Sbjct: 115 NKEVLFQAGRKNGKTVAVVGGGPAGLSSARELARLGY-EVTIFEAENQAGGLNTYGIVSF 173
Query: 186 VSPR 189
P+
Sbjct: 174 RLPQ 177
>gi|425206900|ref|ZP_18602712.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK2001]
gi|408121217|gb|EKH52178.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Escherichia coli FRIK2001]
Length = 412
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAD 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GY D+TIYEK +
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKEAH 158
>gi|26248527|ref|NP_754567.1| oxidoreductase [Escherichia coli CFT073]
gi|300982860|ref|ZP_07176324.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
45-1]
gi|301048882|ref|ZP_07195875.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
185-1]
gi|386629936|ref|YP_006149656.1| putative oxidoreductase [Escherichia coli str. 'clone D i2']
gi|386634856|ref|YP_006154575.1| putative oxidoreductase [Escherichia coli str. 'clone D i14']
gi|386639723|ref|YP_006106521.1| bifunctional: putative glutamate synthase (N-terminal); putative
oxidoreductase (C-terminal), partial [Escherichia coli
ABU 83972]
gi|422362783|ref|ZP_16443335.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
153-1]
gi|432412360|ref|ZP_19655023.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE39]
gi|432436873|ref|ZP_19679261.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE188]
gi|432457254|ref|ZP_19699438.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE201]
gi|432496254|ref|ZP_19738050.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE214]
gi|432504976|ref|ZP_19746700.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE220]
gi|432524345|ref|ZP_19761473.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE230]
gi|432569227|ref|ZP_19805739.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE53]
gi|432608034|ref|ZP_19844219.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE67]
gi|432651702|ref|ZP_19887456.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE87]
gi|432784095|ref|ZP_20018274.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE63]
gi|432974295|ref|ZP_20163134.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE209]
gi|432995883|ref|ZP_20184488.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE218]
gi|433000452|ref|ZP_20188977.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE223]
gi|433058666|ref|ZP_20245712.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE124]
gi|433087827|ref|ZP_20274198.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE137]
gi|433116081|ref|ZP_20301872.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE153]
gi|433125731|ref|ZP_20311290.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE160]
gi|433139800|ref|ZP_20325056.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE167]
gi|433149717|ref|ZP_20334738.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE174]
gi|433213058|ref|ZP_20396648.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE99]
gi|442607897|ref|ZP_21022657.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Escherichia coli Nissle 1917]
gi|26108932|gb|AAN81135.1|AE016763_94 Hypothetical oxidoreductase yeiT [Escherichia coli CFT073]
gi|300299258|gb|EFJ55643.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
185-1]
gi|300408660|gb|EFJ92198.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
45-1]
gi|307554215|gb|ADN46990.1| bifunctional: putative glutamate synthase (N-terminal); putative
oxidoreductase (C-terminal) [Escherichia coli ABU 83972]
gi|315294489|gb|EFU53837.1| pyridine nucleotide-disulfide oxidoreductase [Escherichia coli MS
153-1]
gi|355420835|gb|AER85032.1| putative oxidoreductase [Escherichia coli str. 'clone D i2']
gi|355425755|gb|AER89951.1| putative oxidoreductase [Escherichia coli str. 'clone D i14']
gi|430934767|gb|ELC55114.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE39]
gi|430962204|gb|ELC80061.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE188]
gi|430981988|gb|ELC98707.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE201]
gi|431023512|gb|ELD36707.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE214]
gi|431038070|gb|ELD49039.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE220]
gi|431051461|gb|ELD61124.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE230]
gi|431099941|gb|ELE04957.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE53]
gi|431137920|gb|ELE39760.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE67]
gi|431190149|gb|ELE89549.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE87]
gi|431328518|gb|ELG15822.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE63]
gi|431489156|gb|ELH68784.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE209]
gi|431505443|gb|ELH84049.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE218]
gi|431508438|gb|ELH86710.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE223]
gi|431568921|gb|ELI41883.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE124]
gi|431604338|gb|ELI73747.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE137]
gi|431633843|gb|ELJ02105.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE153]
gi|431644965|gb|ELJ12618.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE160]
gi|431660113|gb|ELJ27001.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE167]
gi|431670386|gb|ELJ36739.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE174]
gi|431734083|gb|ELJ97484.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE99]
gi|441710502|emb|CCQ08634.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Escherichia coli Nissle 1917]
Length = 412
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TI+EK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIHEKE 156
>gi|336235881|ref|YP_004588497.1| glutamate synthase [Geobacillus thermoglucosidasius C56-YS93]
gi|335362736|gb|AEH48416.1| Glutamate synthase (NADPH) [Geobacillus thermoglucosidasius
C56-YS93]
Length = 451
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 106/181 (58%), Gaps = 18/181 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF ++ L++R A++EA+RCL C DAPC K+CPT IDI +FI I+ N G+AK
Sbjct: 8 LAKNFQEV-DPGLTDREAIEEANRCLYCYDAPCIKACPTGIDIPAFIKKIASGNLKGSAK 66
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIR 135
I S NP+G +C VCPT +LC G C L + + I IG LQ++AT+ + + Q
Sbjct: 67 TIMSSNPVGASCARVCPTEELCEGACVLNHSTK-SIMIGKLQRYATDWAIRNKEVLFQAG 125
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+ K +A++G GPA LS A L+RMGY ITI+E NTY +V+ P
Sbjct: 126 QKNGKT------VAVVGGGPAGLSAARELARMGY-TITIFEAEKEAGGLNTYGIVSFRLP 178
Query: 189 R 189
+
Sbjct: 179 Q 179
>gi|433198782|ref|ZP_20382684.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE94]
gi|431721486|gb|ELJ85480.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE94]
Length = 412
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGLLQRFVTDFEQQTGM-EIYLPGTKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|261419624|ref|YP_003253306.1| oxidoreductase [Geobacillus sp. Y412MC61]
gi|319766441|ref|YP_004131942.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus sp. Y412MC52]
gi|375008432|ref|YP_004982065.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus thermoleovorans CCB_US3_UF5]
gi|261376081|gb|ACX78824.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Geobacillus sp. Y412MC61]
gi|317111307|gb|ADU93799.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus sp. Y412MC52]
gi|359287281|gb|AEV18965.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus thermoleovorans CCB_US3_UF5]
Length = 465
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 24/184 (13%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF++++ L++R A++EA+RCL C DAPC ++CPT IDI +FI I+ N G+AK
Sbjct: 22 LEKNFEEVE-PGLTDREAMEEANRCLYCYDAPCIRACPTGIDIPAFIKKIASGNVKGSAK 80
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I
Sbjct: 81 TIMLSNPVGASCARVCPTEELCEGACVLNHSTK-PIMIGKLQRYAT----DWAIR----- 130
Query: 138 DAKVDFPDTK-----IALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTN 185
+ +V F + +A++G GPA LS A L+R+GY ++TI+E NTY +V+
Sbjct: 131 NKEVLFQAGRKNGKTVAVVGGGPAGLSSARELARLGY-EVTIFEAENQAGGLNTYGIVSF 189
Query: 186 VSPR 189
P+
Sbjct: 190 RLPQ 193
>gi|311031549|ref|ZP_07709639.1| putative oxidoreductase [Bacillus sp. m3-13]
Length = 456
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 112/202 (55%), Gaps = 20/202 (9%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF + K L++R AL+EA+RCL C DAPC +CPT IDI SFI I+ N G+AK
Sbjct: 13 LTVNFMEAK-PGLTDREALEEANRCLYCYDAPCIVACPTSIDIPSFIKKIASGNLKGSAK 71
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I S NP+G +C VCPT +LC G C L + PI IG LQ++AT D I +
Sbjct: 72 TIMSANPVGASCSRVCPTEELCEGACVLNHHTK-PIVIGDLQRYAT----DWAIRNEQVL 126
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPRI 190
K K+A++G GPA LS A L+ +G+ +TI+E NTY +V+ P+
Sbjct: 127 FQKGKSNGKKVAIVGGGPAGLSAARELALLGF-QVTIFEAEKEAGGLNTYGIVSFRLPK- 184
Query: 191 VKGTTSRHLYGPEQGSFLNIEL 212
S + EQ L++E+
Sbjct: 185 -----SVSFWEVEQVKSLDVEI 201
>gi|255262949|ref|ZP_05342291.1| glutamate synthase subunit beta [Thalassiobium sp. R2A62]
gi|255105284|gb|EET47958.1| glutamate synthase subunit beta [Thalassiobium sp. R2A62]
Length = 444
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDD+ H L+ A A RC C DAPC +CPT IDI FI IS AAK
Sbjct: 19 LAQNFDDL-HAPLAPHEAAVAADRCYFCHDAPCITACPTDIDIPLFIRQISTGTPDAAAK 77
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I S N LG C VCPT DLC C AE P+ IG LQ+FAT+ + + P
Sbjct: 78 TILSQNILGGMCARVCPTEDLCEQACVRELAEGKPVEIGRLQRFATDSLMEKNVH----P 133
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ D KIA++G GPA LSCA L+ +G +++ IY+ NT
Sbjct: 134 FTRADATGKKIAVLGAGPAGLSCAHRLAMLG-NEVVIYDPNT 174
>gi|373858792|ref|ZP_09601526.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Bacillus sp. 1NLA3E]
gi|372451384|gb|EHP24861.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Bacillus sp. 1NLA3E]
Length = 458
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 102/164 (62%), Gaps = 7/164 (4%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S +L NF +I + L++R AL+E++RCL C DAPC K+CPT IDI +FI I+ N
Sbjct: 9 ISSENLSLNFQEI-NPGLTKRDALEESNRCLYCYDAPCIKACPTGIDIPTFIKKIASGNL 67
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+AK IFS NP+G +C VCPT +LC G C L A + PI IG LQ+++T+ +
Sbjct: 68 KGSAKTIFSANPIGASCARVCPTEELCEGACVLNHATK-PIMIGSLQRYSTD-WTIQNEQ 125
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P K +A++G GPA LS A L+ +GY +TI+E
Sbjct: 126 VLFEPGQK---NGKSVAIVGGGPAGLSAARELALLGY-QVTIFE 165
>gi|403235179|ref|ZP_10913765.1| dihydropyrimidine dehydrogenase subunit A [Bacillus sp. 10403023]
Length = 456
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 20/182 (10%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFD++ + L+ R A++E++RCL C DAPC +CPT IDI +FI I+ N G+AK
Sbjct: 13 LKRNFDEV-NPGLTNREAIEESNRCLYCYDAPCITACPTGIDIPTFIKKIASGNLKGSAK 71
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ---I 134
I + NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I +
Sbjct: 72 TIMTSNPIGASCARVCPTEELCEGACVLNRSTK-PIMIGDLQRYAT----DWAIRNEQVL 126
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVS 187
P K K+A++G GPA LS A L +GY D+TI+E NTY +V+
Sbjct: 127 FEPGRK---NGKKVAVVGGGPAGLSAARELGLLGY-DVTIFEAEDKAGGLNTYGIVSFRL 182
Query: 188 PR 189
P+
Sbjct: 183 PQ 184
>gi|197264244|ref|ZP_03164318.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197242499|gb|EDY25119.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
Length = 413
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---HGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|375002010|ref|ZP_09726350.1| pyridine nucleotide-disulfide oxidoreductase [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353076698|gb|EHB42458.1| pyridine nucleotide-disulfide oxidoreductase [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 413
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|383179105|ref|YP_005457110.1| dihydropyrimidine dehydrogenase subunit A [Shigella sonnei 53G]
gi|414576740|ref|ZP_11433922.1| hypothetical protein SS323385_2576 [Shigella sonnei 3233-85]
gi|415844603|ref|ZP_11524345.1| hypothetical protein SS53G_1044 [Shigella sonnei 53G]
gi|418266500|ref|ZP_12886006.1| NADH-dependent dihydropyrimidine dehydrogenase subunit domain
protein [Shigella sonnei str. Moseley]
gi|420359207|ref|ZP_14860181.1| hypothetical protein SS322685_2998 [Shigella sonnei 3226-85]
gi|420363811|ref|ZP_14864695.1| NADH-dependent dihydropyrimidine dehydrogenase subunit domain
protein [Shigella sonnei 4822-66]
gi|323168715|gb|EFZ54395.1| hypothetical protein SS53G_1044 [Shigella sonnei 53G]
gi|391281888|gb|EIQ40525.1| hypothetical protein SS322685_2998 [Shigella sonnei 3226-85]
gi|391284493|gb|EIQ43088.1| hypothetical protein SS323385_2576 [Shigella sonnei 3233-85]
gi|391294055|gb|EIQ52308.1| NADH-dependent dihydropyrimidine dehydrogenase subunit domain
protein [Shigella sonnei 4822-66]
gi|397899730|gb|EJL16102.1| NADH-dependent dihydropyrimidine dehydrogenase subunit domain
protein [Shigella sonnei str. Moseley]
Length = 161
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLG----KVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ GY D+TIYEK
Sbjct: 134 PAGLQASVTLTNQGY-DVTIYEKE 156
>gi|379701414|ref|YP_005243142.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496894|ref|YP_005397583.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|323130513|gb|ADX17943.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|380463715|gb|AFD59118.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
Length = 427
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 33 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 93 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 147
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 148 PAGLQASVTLTHLGY-DVTIYEKQ 170
>gi|168818104|ref|ZP_02830104.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|409250798|ref|YP_006886606.1| Glutamate synthase [NADPH] small chain NADPH-GOGAT [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|205345006|gb|EDZ31770.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|320086626|emb|CBY96397.1| Glutamate synthase [NADPH] small chain NADPH-GOGAT [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|416424072|ref|ZP_11691340.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416434197|ref|ZP_11697531.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416447747|ref|ZP_11706000.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416450544|ref|ZP_11707619.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416460466|ref|ZP_11714774.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416470241|ref|ZP_11718766.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416476707|ref|ZP_11721195.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416491434|ref|ZP_11727068.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416496172|ref|ZP_11729029.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416540668|ref|ZP_11750473.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416575356|ref|ZP_11768388.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416586629|ref|ZP_11775641.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594601|ref|ZP_11780433.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416602142|ref|ZP_11785199.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416607212|ref|ZP_11788394.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416611799|ref|ZP_11791028.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416623877|ref|ZP_11797659.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416630117|ref|ZP_11800524.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416636554|ref|ZP_11803117.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416652103|ref|ZP_11811505.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416655357|ref|ZP_11812515.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416669134|ref|ZP_11819159.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416678675|ref|ZP_11822729.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416700979|ref|ZP_11829244.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416705401|ref|ZP_11830882.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416713657|ref|ZP_11837212.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416720142|ref|ZP_11841908.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416721578|ref|ZP_11842743.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416733936|ref|ZP_11850731.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416738170|ref|ZP_11853198.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416751877|ref|ZP_11860278.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416759751|ref|ZP_11864576.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760406|ref|ZP_11864799.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|416767518|ref|ZP_11869978.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|418484889|ref|ZP_13053879.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418486677|ref|ZP_13055626.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418496960|ref|ZP_13063385.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418500324|ref|ZP_13066722.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418503300|ref|ZP_13069665.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418509323|ref|ZP_13075619.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418528000|ref|ZP_13093953.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|322615213|gb|EFY12135.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617804|gb|EFY14700.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322626947|gb|EFY23743.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634133|gb|EFY30869.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635676|gb|EFY32386.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640189|gb|EFY36853.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646388|gb|EFY42900.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649355|gb|EFY45791.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656476|gb|EFY52765.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322661452|gb|EFY57676.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665660|gb|EFY61844.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667184|gb|EFY63351.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671190|gb|EFY67318.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675170|gb|EFY71247.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680778|gb|EFY76813.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686953|gb|EFY82930.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192717|gb|EFZ77944.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323198851|gb|EFZ83950.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323205139|gb|EFZ90117.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323213534|gb|EFZ98325.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215793|gb|EGA00536.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221292|gb|EGA05715.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323223842|gb|EGA08145.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231239|gb|EGA15354.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233673|gb|EGA17765.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237743|gb|EGA21803.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245726|gb|EGA29720.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246536|gb|EGA30515.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253019|gb|EGA36852.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254773|gb|EGA38576.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259527|gb|EGA43162.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268310|gb|EGA51785.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271901|gb|EGA55317.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|366055963|gb|EHN20296.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366057193|gb|EHN21497.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366069177|gb|EHN33303.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366072976|gb|EHN37056.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366073142|gb|EHN37217.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366078513|gb|EHN42514.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366827203|gb|EHN54112.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372204124|gb|EHP17655.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417359402|ref|ZP_12133786.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|417384308|ref|ZP_12149718.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353589670|gb|EHC48403.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353609288|gb|EHC62641.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|416566651|ref|ZP_11763943.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|417350124|ref|ZP_12128591.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353570907|gb|EHC35026.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|363579487|gb|EHL63269.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|288554817|ref|YP_003426752.1| dihydropyrimidine dehydrogenase subunit A [Bacillus pseudofirmus
OF4]
gi|288545977|gb|ADC49860.1| putative thioredoxin oxidoreductase (TDOR) [Bacillus pseudofirmus
OF4]
Length = 457
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 101/172 (58%), Gaps = 13/172 (7%)
Query: 27 HTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLG 86
H L+ R A++EA+RCL C DAPC +CPT IDI FI IS N G+AK I + NP+G
Sbjct: 21 HPGLTNREAVEEANRCLFCYDAPCITACPTSIDIPKFIKKISSGNMLGSAKTIMTANPVG 80
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT 146
+C VCPT +LC G C L + + PI IG LQ++AT+ M Q+ K +
Sbjct: 81 ASCSRVCPTEELCEGACVLNHSTK-PIMIGDLQRYATDWA--MKNEQVLFKAGKKN--GK 135
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPRIV 191
+A++G GPA LS A L+ +GY D+TIYE NTY +V+ P+ V
Sbjct: 136 TVAIVGGGPAGLSAARELALIGY-DVTIYEAEKEAGGLNTYGIVSFRLPQRV 186
>gi|168242272|ref|ZP_02667204.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194450503|ref|YP_002046239.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|386591997|ref|YP_006088397.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
gi|419728294|ref|ZP_14255260.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419736477|ref|ZP_14263317.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419741040|ref|ZP_14267752.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419745193|ref|ZP_14271836.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419746835|ref|ZP_14273410.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421570025|ref|ZP_16015719.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421574424|ref|ZP_16020045.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421579968|ref|ZP_16025530.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421585702|ref|ZP_16031194.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|194408807|gb|ACF69026.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205338319|gb|EDZ25083.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|381291786|gb|EIC33015.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381292984|gb|EIC34157.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381299831|gb|EIC40899.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381306617|gb|EIC47490.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381320709|gb|EIC61251.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383799041|gb|AFH46123.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
gi|402521443|gb|EJW28781.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402524624|gb|EJW31921.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402525518|gb|EJW32806.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402529552|gb|EJW36785.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---HGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417512005|ref|ZP_12176453.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353641188|gb|EHC85983.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|168236355|ref|ZP_02661413.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194736184|ref|YP_002115275.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194711686|gb|ACF90907.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290588|gb|EDY29943.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417391889|ref|ZP_12154908.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353613885|gb|EHC65874.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|204929048|ref|ZP_03220191.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204321592|gb|EDZ06791.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|198242469|ref|YP_002216270.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|375119754|ref|ZP_09764921.1| Uncharacterized oxidoreductase yeiT [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|417519271|ref|ZP_12181458.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|445146625|ref|ZP_21387839.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445154464|ref|ZP_21391791.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|197936985|gb|ACH74318.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|326624021|gb|EGE30366.1| Uncharacterized oxidoreductase yeiT [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|353647058|gb|EHC90289.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|444845522|gb|ELX70732.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444850709|gb|ELX75806.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417540390|ref|ZP_12192431.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
gi|353662769|gb|EHD01664.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|197249830|ref|YP_002147157.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|440763098|ref|ZP_20942145.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440769250|ref|ZP_20948210.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440771395|ref|ZP_20950313.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|197213533|gb|ACH50930.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|436415238|gb|ELP13159.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436421027|gb|ELP18878.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|436421741|gb|ELP19584.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|167551142|ref|ZP_02344897.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|421883592|ref|ZP_16314821.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|452119609|ref|YP_007469857.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|205323951|gb|EDZ11790.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|379986818|emb|CCF87094.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|451908613|gb|AGF80419.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|416508121|ref|ZP_11735904.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416513717|ref|ZP_11738038.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416529763|ref|ZP_11744530.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416539690|ref|ZP_11750097.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416551700|ref|ZP_11756606.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416561690|ref|ZP_11761687.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|417466720|ref|ZP_12165069.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353629886|gb|EHC77593.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|363552166|gb|EHL36472.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363552736|gb|EHL37019.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363559770|gb|EHL43922.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363566115|gb|EHL50134.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363567297|gb|EHL51297.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363573883|gb|EHL57757.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|238912628|ref|ZP_04656465.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|422026462|ref|ZP_16372853.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422031483|ref|ZP_16377652.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427551121|ref|ZP_18928156.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427567353|ref|ZP_18932871.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427587563|ref|ZP_18937661.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427611273|ref|ZP_18942528.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427634868|ref|ZP_18947421.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427656493|ref|ZP_18952186.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427661645|ref|ZP_18957099.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427670207|ref|ZP_18961899.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427774706|ref|ZP_18967135.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|414017540|gb|EKT01248.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414018484|gb|EKT02133.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414020241|gb|EKT03830.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414032224|gb|EKT15235.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414033645|gb|EKT16594.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414036624|gb|EKT19441.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414046793|gb|EKT29108.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414047796|gb|EKT30062.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414052540|gb|EKT34576.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414059230|gb|EKT40819.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414064727|gb|EKT45604.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417366421|ref|ZP_12138716.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353591987|gb|EHC50121.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|161613122|ref|YP_001587087.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|161362486|gb|ABX66254.1| hypothetical protein SPAB_00830 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|437840313|ref|ZP_20846412.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435297098|gb|ELO73394.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417476368|ref|ZP_12170905.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|353641081|gb|EHC85899.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|16761128|ref|NP_456745.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29141176|ref|NP_804518.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|213052361|ref|ZP_03345239.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213646117|ref|ZP_03376170.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213854516|ref|ZP_03382756.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|378958820|ref|YP_005216306.1| putative oxidoreductase yeiT [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|20178216|sp|Q8Z5A6.1|PRET_SALTI RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreT homolog; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|25317535|pir||AH0780 probable oxidoreductase STY2416 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503426|emb|CAD02566.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136802|gb|AAO68367.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374352692|gb|AEZ44453.1| putative oxidoreductase yeiT [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|418512905|ref|ZP_13079140.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|366082842|gb|EHN46772.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|16765516|ref|NP_461131.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167991113|ref|ZP_02572212.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|374981220|ref|ZP_09722550.1| pyridine nucleotide-disulfide oxidoreductase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378445621|ref|YP_005233253.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378450873|ref|YP_005238232.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378700099|ref|YP_005182056.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378984748|ref|YP_005247903.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378989573|ref|YP_005252737.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|417327485|ref|ZP_12112890.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|20178221|sp|Q8ZNL8.1|PRET_SALTY RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreT; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|16420723|gb|AAL21090.1| putative NADPH-dependent glutamate synthase beta chain or related
oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205330548|gb|EDZ17312.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|261247400|emb|CBG25225.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994251|gb|ACY89136.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158747|emb|CBW18259.1| hypothetical oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913176|dbj|BAJ37150.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321224840|gb|EFX49903.1| pyridine nucleotide-disulfide oxidoreductase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|332989120|gb|AEF08103.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353570492|gb|EHC34744.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417374443|ref|ZP_12144196.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353599481|gb|EHC55639.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
Length = 320
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|213582552|ref|ZP_03364378.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 350
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|339999949|ref|YP_004730832.1| oxidoreductase [Salmonella bongori NCTC 12419]
gi|339513310|emb|CCC31060.1| putative oxidoreductase [Salmonella bongori NCTC 12419]
Length = 413
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|432372823|ref|ZP_19615864.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE11]
gi|430895962|gb|ELC18213.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit A
[Escherichia coli KTE11]
Length = 412
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+I LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQSGCT-RAGVDDPIDIARLQRFVTDFEQQTGMEIYQPGSKTLG----KVAVIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNT 179
PA L + L+ +GY D+T+YEK
Sbjct: 134 PAGLQASVTLTNLGY-DVTVYEKEV 157
>gi|366160595|ref|ZP_09460457.1| dihydropyrimidine dehydrogenase subunit A [Escherichia sp. TW09308]
Length = 412
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+I LQ+F T+ + G+ +P + K+A+IG G
Sbjct: 79 TEKLCQNGCT-RAGVDDPIDIARLQRFVTDFEQQTGMEIYQPGSKTLG----KVAVIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNT 179
PA L + L+ +GY D+T+YEK
Sbjct: 134 PAGLQASVTLTNLGY-DVTVYEKEV 157
>gi|423140757|ref|ZP_17128395.1| pyridine nucleotide-disulfide oxidoreductase [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053311|gb|EHY71202.1| pyridine nucleotide-disulfide oxidoreductase [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 413
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|67078137|ref|YP_245757.1| putative oxidoreductase [Bacillus cereus E33L]
gi|66970443|gb|AAY60419.1| glutamate synthase, small subunit [Bacillus cereus E33L]
Length = 462
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 101/183 (55%), Gaps = 19/183 (10%)
Query: 22 FDDIKHT------TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+DIKH L+ + ++EA+RCL C DAPC K+CPT IDI SFI I+ N G+
Sbjct: 11 IEDIKHNFLEVKPDLTFKEVIEEANRCLYCYDAPCIKACPTSIDIPSFIKKITTDNLKGS 70
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
A+ I NP+G TC VCPT +LC G C L A + PI IG LQ+ T + +
Sbjct: 71 ARVILEANPVGATCARVCPTEELCEGACVLNEASQ-PIKIGDLQRHVTNWTMKNEVQLFK 129
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+ K IA++G GPA LS A L+R+GY +TI+E +TY +V+ P
Sbjct: 130 EGEKK----GKTIAIVGGGPAGLSTARELARLGY-AVTIFEAKEKAGGLDTYGIVSFRLP 184
Query: 189 RIV 191
+ V
Sbjct: 185 QEV 187
>gi|213419689|ref|ZP_03352755.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 339
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|445215827|ref|ZP_21401979.1| dihydropyrimidine dehydrogenase subunit A, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444858894|gb|ELX83864.1| dihydropyrimidine dehydrogenase subunit A, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
Length = 392
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|437599998|ref|ZP_20797157.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435262916|gb|ELO41998.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
Length = 406
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|424736667|ref|ZP_18165126.1| glutamate synthasemall subunit [Lysinibacillus fusiformis ZB2]
gi|422949663|gb|EKU44037.1| glutamate synthasemall subunit [Lysinibacillus fusiformis ZB2]
Length = 455
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 11/164 (6%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ L NF ++K +++ A++EA+RCL C DAPC K+CPT I I +FI I+ N G
Sbjct: 10 TVQLRRNFVELKGK-MTKNEAIEEANRCLYCYDAPCIKACPTSIQIPNFIKKIASGNMKG 68
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
+A I NP+G +C VCPT +LC G C L ++ + PI IG LQ++AT+ +
Sbjct: 69 SATTILEANPIGASCARVCPTEELCEGACVLNSSTK-PIKIGELQRYATDWAMETNAQLF 127
Query: 135 R--PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P + + KIA++G GPA LS A LSR+GY +TIYE
Sbjct: 128 KAGPHNGQ------KIAIVGAGPAGLSAARELSRLGY-QVTIYE 164
>gi|417419237|ref|ZP_12159929.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353619671|gb|EHC69989.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 425
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|317497755|ref|ZP_07956068.1| pyridine nucleotide-disulfide oxidoreductase [Lachnospiraceae
bacterium 5_1_63FAA]
gi|316894944|gb|EFV17113.1| pyridine nucleotide-disulfide oxidoreductase [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 402
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EASRCL C DAPC KSCP + D FI S+ +N GAA+ I +NPL C V
Sbjct: 20 RTAMEEASRCLLCHDAPCSKSCPAKTDPAKFIRSLRFRNIKGAAETIRENNPLAGCCAEV 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP LC C+ ++ PI IG LQ+F E+ K G+ + + + D KIA +G
Sbjct: 80 CPYGQLCEQACSRTGIDK-PIEIGKLQKFLVEMEKREGMEFLHVEEKR----DGKIACVG 134
Query: 153 CGPASLSCATFLSRMGYDDITIYEKN-------TYDMVTNVSPRIV 191
GPASL+CA L+ GY D+TIYE N TY +V + P+ V
Sbjct: 135 AGPASLACARELALFGY-DVTIYEANEKAGGVLTYGIVPSRLPQEV 179
>gi|167768314|ref|ZP_02440367.1| hypothetical protein CLOSS21_02870 [Clostridium sp. SS2/1]
gi|429761879|ref|ZP_19294289.1| pyridine nucleotide-disulfide oxidoreductase [Anaerostipes hadrus
DSM 3319]
gi|167709838|gb|EDS20417.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium sp.
SS2/1]
gi|291560290|emb|CBL39090.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [butyrate-producing bacterium SSC/2]
gi|429182664|gb|EKY23752.1| pyridine nucleotide-disulfide oxidoreductase [Anaerostipes hadrus
DSM 3319]
Length = 402
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EASRCL C DAPC KSCP + D FI S+ +N GAA+ I +NPL C V
Sbjct: 20 RTAMEEASRCLLCHDAPCSKSCPAKTDPAKFIRSLRFRNIKGAAETIRENNPLAGCCAEV 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP LC C+ ++ PI IG LQ+F E+ K G+ + + + D KIA +G
Sbjct: 80 CPYGQLCEQACSRTGIDK-PIEIGKLQKFLVEMEKREGMEFLHVEEKR----DGKIACVG 134
Query: 153 CGPASLSCATFLSRMGYDDITIYEKN-------TYDMVTNVSPRIV 191
GPASL+CA L+ GY D+TIYE N TY +V + P+ V
Sbjct: 135 AGPASLACARELALFGY-DVTIYEANEKAGGVLTYGIVPSRLPQEV 179
>gi|224583313|ref|YP_002637111.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224467840|gb|ACN45670.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 427
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 33 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 93 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 147
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 148 PAGLQASVTLTHLGY-DVTIYEKQ 170
>gi|418789266|ref|ZP_13345053.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418794067|ref|ZP_13349789.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418796664|ref|ZP_13352355.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418840993|ref|ZP_13395816.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418844714|ref|ZP_13399500.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418855816|ref|ZP_13410467.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418857924|ref|ZP_13412547.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418862219|ref|ZP_13416763.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418868426|ref|ZP_13422869.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392760507|gb|EJA17342.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392762062|gb|EJA18878.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392770037|gb|EJA26765.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392809659|gb|EJA65693.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392813523|gb|EJA69487.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392820857|gb|EJA76698.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392834602|gb|EJA90206.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392836671|gb|EJA92251.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392838332|gb|EJA93896.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 413
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|168466134|ref|ZP_02700004.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|418760502|ref|ZP_13316656.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765101|ref|ZP_13321194.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418772117|ref|ZP_13328121.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418775333|ref|ZP_13331291.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418781494|ref|ZP_13337377.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418783760|ref|ZP_13339605.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418803297|ref|ZP_13358918.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419789720|ref|ZP_14315400.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|419792218|ref|ZP_14317860.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|195631302|gb|EDX49862.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|392615505|gb|EIW97944.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392618942|gb|EIX01328.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392732231|gb|EIZ89442.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392742050|gb|EIZ99145.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392742582|gb|EIZ99669.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392747262|gb|EJA04263.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392748406|gb|EJA05392.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392756772|gb|EJA13667.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392772826|gb|EJA29523.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 413
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|56412900|ref|YP_149975.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168229541|ref|ZP_02654599.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194471899|ref|ZP_03077883.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197361831|ref|YP_002141467.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56127157|gb|AAV76663.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194458263|gb|EDX47102.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197093307|emb|CAR58755.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205335861|gb|EDZ22625.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 413
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|62180773|ref|YP_217190.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|200388145|ref|ZP_03214757.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|207857620|ref|YP_002244271.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375115102|ref|ZP_09760272.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|421359400|ref|ZP_15809693.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421364030|ref|ZP_15814268.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421367070|ref|ZP_15817272.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421373050|ref|ZP_15823195.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421375415|ref|ZP_15825528.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421382197|ref|ZP_15832248.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421386911|ref|ZP_15836917.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421391250|ref|ZP_15841221.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421395620|ref|ZP_15845556.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421397941|ref|ZP_15847850.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421402504|ref|ZP_15852362.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421409048|ref|ZP_15858843.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421411772|ref|ZP_15861536.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421418186|ref|ZP_15867892.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421422744|ref|ZP_15872412.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421424898|ref|ZP_15874535.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421433230|ref|ZP_15882798.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434133|ref|ZP_15883683.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421441875|ref|ZP_15891335.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421443238|ref|ZP_15892680.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421449782|ref|ZP_15899162.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|436609107|ref|ZP_20513668.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436726189|ref|ZP_20519102.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436802769|ref|ZP_20525502.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436809496|ref|ZP_20528876.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436814752|ref|ZP_20532303.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436844174|ref|ZP_20537932.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436854496|ref|ZP_20544130.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855780|ref|ZP_20544905.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436864281|ref|ZP_20550248.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870252|ref|ZP_20554058.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877743|ref|ZP_20558671.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886682|ref|ZP_20563102.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436893539|ref|ZP_20567446.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436901287|ref|ZP_20572197.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436912676|ref|ZP_20578505.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920318|ref|ZP_20582914.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436926655|ref|ZP_20586481.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436936625|ref|ZP_20592065.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940637|ref|ZP_20594581.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436946639|ref|ZP_20598166.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436961979|ref|ZP_20605353.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436969167|ref|ZP_20608288.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436976842|ref|ZP_20612092.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436989609|ref|ZP_20616616.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437001021|ref|ZP_20620817.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437022384|ref|ZP_20628353.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437036132|ref|ZP_20633864.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437044128|ref|ZP_20637081.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052087|ref|ZP_20641647.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437059145|ref|ZP_20645992.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064812|ref|ZP_20648586.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437077132|ref|ZP_20655340.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437083618|ref|ZP_20659272.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437092036|ref|ZP_20663636.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437113875|ref|ZP_20669077.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122068|ref|ZP_20672105.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437128650|ref|ZP_20675337.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437139191|ref|ZP_20681673.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437144137|ref|ZP_20684751.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151271|ref|ZP_20689148.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437162707|ref|ZP_20696269.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437169955|ref|ZP_20700050.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437174139|ref|ZP_20702104.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437181181|ref|ZP_20706352.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437235898|ref|ZP_20713884.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|437261933|ref|ZP_20718679.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437267385|ref|ZP_20721137.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437280656|ref|ZP_20728033.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437289936|ref|ZP_20731314.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437311878|ref|ZP_20735986.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437330416|ref|ZP_20741580.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437346869|ref|ZP_20747023.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437367371|ref|ZP_20748858.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437411011|ref|ZP_20752787.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437461026|ref|ZP_20761979.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437479728|ref|ZP_20768075.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437494365|ref|ZP_20772394.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437505346|ref|ZP_20775400.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437535226|ref|ZP_20781460.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437559627|ref|ZP_20785843.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437572292|ref|ZP_20789054.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437583594|ref|ZP_20792588.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437616830|ref|ZP_20802582.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|437631393|ref|ZP_20806387.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|437662169|ref|ZP_20813386.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437690114|ref|ZP_20820208.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437730241|ref|ZP_20831167.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437742063|ref|ZP_20833320.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437813083|ref|ZP_20841668.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|438041794|ref|ZP_20855773.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438099371|ref|ZP_20863387.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438109504|ref|ZP_20867467.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|445165193|ref|ZP_21394076.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445229401|ref|ZP_21405045.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445344325|ref|ZP_21417597.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|445361597|ref|ZP_21423889.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|62128406|gb|AAX66109.1| putative NADPH-dependent glutamate synthase beta chain or related
oxidoreductase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|199605243|gb|EDZ03788.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|206709423|emb|CAR33764.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|322715248|gb|EFZ06819.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|395985023|gb|EJH94196.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|395985505|gb|EJH94675.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|395989725|gb|EJH98859.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395998678|gb|EJI07705.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|395999297|gb|EJI08319.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396005401|gb|EJI14380.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396011552|gb|EJI20462.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396012259|gb|EJI21157.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396012660|gb|EJI21556.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396025979|gb|EJI34752.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396032041|gb|EJI40766.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396032137|gb|EJI40861.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396039353|gb|EJI47981.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396042059|gb|EJI50682.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396045273|gb|EJI53867.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396049446|gb|EJI57989.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396058494|gb|EJI66955.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396060739|gb|EJI69180.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396062552|gb|EJI70963.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396068598|gb|EJI76944.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396071022|gb|EJI79349.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|434957036|gb|ELL50710.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434967313|gb|ELL60148.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434970287|gb|ELL62907.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434972868|gb|ELL65256.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978760|gb|ELL70752.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434982524|gb|ELL74343.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434983299|gb|ELL75107.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434991994|gb|ELL83464.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995316|gb|ELL86632.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002580|gb|ELL93645.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435008627|gb|ELL99450.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011925|gb|ELM02628.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435018535|gb|ELM08997.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435020721|gb|ELM11110.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435026921|gb|ELM17052.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435027837|gb|ELM17929.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435036496|gb|ELM26315.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435039463|gb|ELM29244.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435045542|gb|ELM35170.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435051118|gb|ELM40622.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435058439|gb|ELM47777.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435059268|gb|ELM48558.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435071176|gb|ELM60126.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435071318|gb|ELM60266.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435074466|gb|ELM63298.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435075575|gb|ELM64389.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435077012|gb|ELM65786.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435081332|gb|ELM69974.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435091489|gb|ELM79880.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435094958|gb|ELM83297.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435100554|gb|ELM88722.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435103970|gb|ELM92044.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435107361|gb|ELM95346.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435112942|gb|ELN00807.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435116173|gb|ELN03924.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435124214|gb|ELN11681.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435128166|gb|ELN15517.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435132713|gb|ELN19911.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435139128|gb|ELN26132.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435142627|gb|ELN29514.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435145154|gb|ELN31983.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435147735|gb|ELN34487.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435157988|gb|ELN44409.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435162304|gb|ELN48488.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435166729|gb|ELN52695.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435170144|gb|ELN55900.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435175901|gb|ELN61303.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435182200|gb|ELN67232.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435183010|gb|ELN67985.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435188923|gb|ELN73585.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435189297|gb|ELN73942.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435189600|gb|ELN74224.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435204216|gb|ELN87913.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435207954|gb|ELN91382.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435219405|gb|ELO01767.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435220718|gb|ELO03000.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435227263|gb|ELO08772.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435235403|gb|ELO16206.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435238938|gb|ELO19547.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435240587|gb|ELO20978.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435247932|gb|ELO27861.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435261558|gb|ELO40712.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435263492|gb|ELO42539.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435267815|gb|ELO46480.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435281743|gb|ELO59396.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435283466|gb|ELO61031.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|435289502|gb|ELO66462.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435297165|gb|ELO73460.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435313144|gb|ELO86887.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435321869|gb|ELO94218.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435325925|gb|ELO97769.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435332653|gb|ELP03564.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|444865494|gb|ELX90264.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444867031|gb|ELX91736.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444880497|gb|ELY04572.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|444884603|gb|ELY08427.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
Length = 413
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|375124160|ref|ZP_09769324.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|326628410|gb|EGE34753.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 427
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 33 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAACARVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 93 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 147
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 148 PAGLQASVTLTHLGY-DVTIYEKQ 170
>gi|189218639|ref|YP_001939280.1| NADPH-dependent glutamate synthase beta chain or related
oxidoreductase [Methylacidiphilum infernorum V4]
gi|189185497|gb|ACD82682.1| NADPH-dependent glutamate synthase beta chain or related
oxidoreductase [Methylacidiphilum infernorum V4]
Length = 448
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 13/163 (7%)
Query: 21 NFDDIKHTT----LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
++IK T L+E A+ EASRCL C + PC SCPT IDI FI I ++ GAA
Sbjct: 11 EMENIKETVSPLCLAE--AVSEASRCLYCWNPPCVSSCPTGIDIPKFIKRIETEDIRGAA 68
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT-EVFKDMGISQIR 135
+ I N LG TCG VCP +LC G C L+ + P++IG LQ+FA +V+ +
Sbjct: 69 EVILKANILGGTCGRVCPVEELCEGSCVLHGLGKSPVSIGKLQRFAVDQVWIHHHLKPKG 128
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
PP P ++A+IG GPA LSCA L++ G++ I +YEK
Sbjct: 129 PPS-----PKQRVAVIGSGPAGLSCAATLAQKGFETI-VYEKK 165
>gi|168259473|ref|ZP_02681446.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|205351040|gb|EDZ37671.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 413
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417532271|ref|ZP_12186705.1| Pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|353663136|gb|EHD01924.1| Pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
Length = 261
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|417334901|ref|ZP_12117933.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353573375|gb|EHC36753.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
Length = 413
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|194442791|ref|YP_002041457.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|418809738|ref|ZP_13365290.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418813892|ref|ZP_13369413.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815159|ref|ZP_13370667.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418822948|ref|ZP_13378359.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418836389|ref|ZP_13391273.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|194401454|gb|ACF61676.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|392773823|gb|EJA30519.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392775118|gb|EJA31813.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392787205|gb|EJA43753.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392793538|gb|EJA49982.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392800750|gb|EJA56980.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
Length = 413
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|418830007|ref|ZP_13384970.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418850867|ref|ZP_13405583.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392802240|gb|EJA58454.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392818717|gb|EJA74601.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 413
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|378954455|ref|YP_005211942.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438129675|ref|ZP_20873375.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|357205066|gb|AET53112.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434941811|gb|ELL48198.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
Length = 413
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAACARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|205353321|ref|YP_002227122.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|445128468|ref|ZP_21380261.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205273102|emb|CAR38057.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|444854930|gb|ELX79985.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 413
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAACARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|317128026|ref|YP_004094308.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Bacillus cellulosilyticus DSM 2522]
gi|315472974|gb|ADU29577.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Bacillus cellulosilyticus DSM 2522]
Length = 452
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 24/204 (11%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF++I L + AL+E++RCL C DAPC ++CPT IDI +FI I+ N G+AK
Sbjct: 11 LRKNFEEI-SPGLKNQEALEESNRCLYCYDAPCIQACPTGIDIPTFIKKIASGNLKGSAK 69
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIR 135
I S NP+G +C VCPT +LC G C L A+ + PI IG LQ++AT+ + + + +
Sbjct: 70 TIMSANPVGASCARVCPTEELCEGACVLNASTK-PIVIGDLQRYATDWAIHNEQVLFKAG 128
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+ K +A++G GPA LS A L+ +GY +TI+E NTY +V+ P
Sbjct: 129 KKNGKT------VAIVGGGPAGLSAARELALLGY-KVTIFEAEKEAGGLNTYGIVSFRLP 181
Query: 189 RIVKGTTSRHLYGPEQGSFLNIEL 212
+ + + EQ L++E+
Sbjct: 182 QAI------SFWEVEQVKSLDVEI 199
>gi|375006679|ref|YP_004975463.1| putative pyridine nucleotide-disulfide oxidoreductase [Azospirillum
lipoferum 4B]
gi|357427937|emb|CBS90886.1| putative pyridine nucleotide-disulphide oxidoreductase
[Azospirillum lipoferum 4B]
Length = 440
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 89/142 (62%), Gaps = 4/142 (2%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL E++RCL C DAPC K+CPT IDI +FI SI+ N GAA I S+N +G TCG VCP
Sbjct: 34 ALAESNRCLFCYDAPCIKACPTGIDIPAFIRSIATGNLKGAATTILSENIMGGTCGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC C AE+ P+ IG LQ+ AT+ D + P A+ ++A++G G
Sbjct: 94 TETLCEQSCVRNRAEDRPVAIGRLQRHATDRLID---GEPTHPFARTTATGKRVAVVGAG 150
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LSCA L+ +G+ ++T++E
Sbjct: 151 PAGLSCAHRLATLGH-EVTVFE 171
>gi|213618664|ref|ZP_03372490.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 314
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|126651250|ref|ZP_01723460.1| glutamate synthasemall subunit [Bacillus sp. B14905]
gi|126592088|gb|EAZ86154.1| glutamate synthasemall subunit [Bacillus sp. B14905]
Length = 455
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 7/162 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ L NF ++K+ +++ A++EA+RCL C DAPC K+CPT I I +FI I+ N G
Sbjct: 10 TLQLKRNFVELKNK-MTKNEAIEEANRCLYCYDAPCIKACPTSIQIPNFIKKIASGNMKG 68
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
+A I NP+G +C VCPT +LC G C L ++ + PI IG LQ++AT+ +
Sbjct: 69 SATTILEANPIGASCARVCPTEELCEGACVLNSSTK-PIKIGELQRYATDWAMETNAQLF 127
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + K+A+IG GPA LS A LSR GY +TIYE
Sbjct: 128 KQGPSN----GHKVAIIGAGPAGLSAARELSRFGY-QVTIYE 164
>gi|410695356|ref|YP_003625978.1| putative glutamate synthase [Thiomonas sp. 3As]
gi|294341781|emb|CAZ90210.1| putative glutamate synthase [Thiomonas sp. 3As]
Length = 456
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C DAPC ++CPTQIDI SFI I+ N GAA+AI NPLG C VCP
Sbjct: 30 ALLEAERCLYCFDAPCARACPTQIDIPSFIRRIADANLRGAAQAILDANPLGGMCARVCP 89
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T DLC C + P+ IG LQ+ A + Q+ A V ++A+IG G
Sbjct: 90 TEDLCEKVCVRNTQQGVPVAIGRLQRHAVDALMRSPRPQVFQRAAPV---GRRVAVIGAG 146
Query: 155 PASLSCATFLSRMGYD 170
PA L+CA L+R GYD
Sbjct: 147 PAGLACAHTLARQGYD 162
>gi|288962205|ref|YP_003452500.1| glutamate synthase (NADPH) small chain [Azospirillum sp. B510]
gi|288914471|dbj|BAI75956.1| glutamate synthase (NADPH) small chain [Azospirillum sp. B510]
Length = 440
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 26/207 (12%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL E++RCL C DAPC ++CPT IDI +FI SI+ N GAA I S+N +G TCG VCP
Sbjct: 34 ALAESNRCLFCYDAPCIRACPTGIDIPAFIRSIATGNLKGAATTILSENIMGGTCGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC C AE+ P+ IG LQ+ AT+ D + P A+ ++A++G G
Sbjct: 94 TETLCEQACVRNRAEDRPVAIGRLQRHATDRLID---GEPAHPFARAAATGKRVAVVGSG 150
Query: 155 PASLSCATFLSRMGYDDITIYEKNT------------YDMVTNVSPRIVK------GTTS 196
PA LSCA L+ +G+ ++T++E Y M + + R V G T
Sbjct: 151 PAGLSCAHRLATLGH-EVTVFEAKAKSGGLNEYGLAPYKMADDFAQREVAFILGVGGITV 209
Query: 197 RHLYGPEQGSFLNIELISEKTAYQWVY 223
H G + G+ L++E + + Y V+
Sbjct: 210 EH--GRKLGAHLSLEKL--RADYDAVF 232
>gi|163758601|ref|ZP_02165688.1| Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding
site:Adrenodoxin reductase:Pyridine [Hoeflea
phototrophica DFL-43]
gi|162283891|gb|EDQ34175.1| Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding
site:Adrenodoxin reductase:Pyridine [Hoeflea
phototrophica DFL-43]
Length = 449
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 89/162 (54%), Gaps = 15/162 (9%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF DI H L+ AL EA RC C DAPC +CPT IDI FI I N G+AK I
Sbjct: 21 DNFSDI-HPPLTPHEALVEADRCYFCYDAPCMTACPTSIDIPMFIRKIQAGNPVGSAKTI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP--- 136
F +N LG C VCPT LC C AE P+ IG LQ+ AT+ F M Q P
Sbjct: 80 FEENILGGMCARVCPTESLCEEVCVREVAEGKPVKIGLLQRHATDTF--MEREQAHPFTR 137
Query: 137 --PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P K KIA+IG GPA LSCA L+ G+ D+TI+E
Sbjct: 138 AAPTGK------KIAVIGAGPAGLSCAHRLAVHGH-DVTIFE 172
>gi|445333742|ref|ZP_21414941.1| dihydropyrimidine dehydrogenase subunit A, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444875429|gb|ELX99628.1| dihydropyrimidine dehydrogenase subunit A, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
Length = 247
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|438082724|ref|ZP_20857910.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435320382|gb|ELO93021.1| dihydropyrimidine dehydrogenase subunit A [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
Length = 304
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|289811812|ref|ZP_06542441.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 162
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|160898302|ref|YP_001563884.1| glutamate synthase subunit beta [Delftia acidovorans SPH-1]
gi|160363886|gb|ABX35499.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Delftia acidovorans SPH-1]
Length = 455
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H L+ AL EA RC C DAPC +CPT ID+ +FI I+ N GAA+ I
Sbjct: 24 NFSD-AHPALNRSQALIEAERCYYCYDAPCTTACPTSIDVPAFIARIAQDNVRGAAREIL 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ NPLG C VCPT LC C E+ P+ IG LQ++AT+ F G + P +
Sbjct: 83 TANPLGGMCSRVCPTEQLCEQACVRNTQEDKPVEIGALQRYATDAFMASGGA---PLFQR 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYD 170
K+A++G GPA L+CA L+ G++
Sbjct: 140 AAATGRKVAVVGAGPAGLTCAHQLALQGHE 169
>gi|56965539|ref|YP_177273.1| oxidoreductase [Bacillus clausii KSM-K16]
gi|56911785|dbj|BAD66312.1| glutamate synthase small subunit [Bacillus clausii KSM-K16]
Length = 448
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 95/165 (57%), Gaps = 7/165 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
S S+ NF +++ LS + A EA+RCL C DAPC +CPT IDI SFI I+ N G
Sbjct: 4 SESIPLNFQEVE-PPLSTQEATDEATRCLYCYDAPCITACPTGIDIPSFIQKITTNNLTG 62
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
+A+ I NP+G +C VCPT +LC G C L + PI IG LQ++AT D I
Sbjct: 63 SARTIMEANPIGASCARVCPTEELCEGACVLNQTSK-PIMIGKLQRYAT----DWAIQNE 117
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+P K+A++G GPA LS A L+ +GY +T+YE T
Sbjct: 118 KPLFTAGKRNGQKVAVVGGGPAGLSAARELALLGY-AVTVYEAET 161
>gi|162454678|ref|YP_001617045.1| glutamate synthase [NADPH] [Sorangium cellulosum So ce56]
gi|161165260|emb|CAN96565.1| Glutamate synthase [NADPH] [Sorangium cellulosum So ce56]
Length = 465
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 13/194 (6%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
++ S + F+D K ++ A+ EA+RCL C DAPC K+CPT IDI SFI I+
Sbjct: 8 LSALPSGRIEERFED-KSPRYTDAEAIAEANRCLYCVDAPCVKACPTAIDIPSFIRKIAG 66
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFK 127
GAA+ I + N LG +CG CP LC G C A PI IG LQ++A E + +
Sbjct: 67 GQVKGAARTILTANLLGQSCGQACPVEVLCAGDCVYNAWGREPIAIGRLQRYAVESALAR 126
Query: 128 DMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTN-- 185
D I + +PP K +AL+G GPAS++ A +L+ G+ + I+E+ N
Sbjct: 127 DPRIFRAKPPTGK------SVALVGAGPASIAAAGYLALEGHRAV-IFERKAIPGGLNTL 179
Query: 186 -VSPRIVKGTTSRH 198
++P +KG + H
Sbjct: 180 GIAPYKMKGHEALH 193
>gi|351730367|ref|ZP_08948058.1| glutamate synthase subunit beta [Acidovorax radicis N35]
Length = 455
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 90/157 (57%), Gaps = 7/157 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H L++ AL EA RC C DAPC +CPT IDI SFI I+ +N GAA+AI
Sbjct: 24 NFSD-AHPPLTKPQALIEAERCYYCHDAPCATACPTGIDIPSFIHRIAQENNRGAARAIL 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD-A 139
NPLG C VCPT LC C E+ P+ IG LQ++AT+ F +Q P
Sbjct: 83 EANPLGGMCARVCPTEVLCEQACVRNTNEDKPVEIGSLQRYATDAF----FAQPSAPLFQ 138
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA L+CA L+ G+ D+ ++E
Sbjct: 139 RAAATGKRVAVVGAGPAGLACAHGLAVRGH-DVVLFE 174
>gi|437444167|ref|ZP_20758243.1| dihydropyrimidine dehydrogenase subunit A, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435210547|gb|ELN93793.1| dihydropyrimidine dehydrogenase subunit A, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
Length = 177
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+TIYEK
Sbjct: 134 PAGLQASVTLTHLGY-DVTIYEKQ 156
>gi|365092488|ref|ZP_09329636.1| glutamate synthase subunit beta [Acidovorax sp. NO-1]
gi|363415612|gb|EHL22739.1| glutamate synthase subunit beta [Acidovorax sp. NO-1]
Length = 449
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H L+ AL EA RC C DAPC +CPT IDI SFI I+ N GAA+AI
Sbjct: 24 NFSD-AHPPLTRAQALIEAERCYYCHDAPCATACPTGIDIPSFIHRIAQDNNRGAARAIL 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD-A 139
NPLG C VCPT LC C E+ P+ IG LQ++AT+ F +Q P
Sbjct: 83 EANPLGGMCARVCPTEVLCEQACVRNTNEDKPVEIGSLQRYATDAF----FAQPGAPLFQ 138
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA L+CA L+ G+ D+ ++E
Sbjct: 139 RASATGKRVAVVGAGPAGLACAHGLAVRGH-DVVLFE 174
>gi|297623160|ref|YP_003704594.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Truepera radiovictrix DSM 17093]
gi|297164340|gb|ADI14051.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Truepera radiovictrix DSM 17093]
Length = 454
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F ++K ++ R A EA+RCL C DAPC ++CPT ID+ +FI I+ N GAA
Sbjct: 8 ALEARFRELK-PPMTAREAKVEANRCLYCFDAPCIRACPTHIDVPTFIRKIATDNVTGAA 66
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
I N + TC VCP +LC G C L A+ PI IG LQ++A D S+ +
Sbjct: 67 VTILEANLMAATCARVCPVEELCEGACVL-GADHKPIEIGRLQRYAM----DHLYSRRKL 121
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN-------TYDMVTNVSP 188
P ++A++G GPA LSCA L+R GY ++T++EKN TY +V P
Sbjct: 122 PFTPAPPTGKRVAVVGAGPAGLSCAGELARRGY-EVTVFEKNPLPGGLSTYGIVVLREP 179
>gi|289423316|ref|ZP_06425124.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Peptostreptococcus anaerobius 653-L]
gi|289156247|gb|EFD04904.1| pyridine nucleotide-disulphide oxidoreductase domain protein
[Peptostreptococcus anaerobius 653-L]
Length = 410
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EA+RCL C DAPC K CP + FI SI +N+ GAA+ I +N LG TC +V
Sbjct: 20 RTAMEEATRCLLCEDAPCSKGCPAGTNPGKFIRSIRMRNFKGAAETIRENNILGGTCALV 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP +LC C +E PI IG LQ+FA E K + +R P+ KV K+A IG
Sbjct: 80 CPYGNLCEKECARCGIDE-PIKIGKLQKFAIEQEKLFNMQTLRAPETKV---GKKVACIG 135
Query: 153 CGPASLSCATFLSRMGYDDITI--YEKNTYDMVTNVSP 188
GPASL+CA L++ G D I YEK + ++P
Sbjct: 136 SGPASLACAAKLAQAGLDVTIIEQYEKAGGVLTYGITP 173
>gi|337746743|ref|YP_004640905.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Paenibacillus mucilaginosus KNP414]
gi|336297932|gb|AEI41035.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Paenibacillus mucilaginosus KNP414]
Length = 459
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 24/200 (12%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FD+I+ + AL+E++RCL C DAPC ++CPT I + +FI I+ + GAA+ I
Sbjct: 21 FDEIE-PGMRPGEALEESNRCLYCYDAPCIQACPTAIPVPTFIKQIATGHLKGAARTIML 79
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS--QIRPPDA 139
NP G +C VCPT +LC G C L A + PI IG LQ++AT+ G S Q P+
Sbjct: 80 ANPAGASCSRVCPTEELCEGACVLNDASK-PILIGRLQRYATDWAMKSGQSLLQAGAPNG 138
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPRIVK 192
+ K+A+IG GPA LS A L+R G+ ++T+YE NTY +V+ P+ V
Sbjct: 139 R------KVAVIGAGPAGLSAARELARFGF-EVTVYEAKELGGGLNTYGIVSFRLPQEVS 191
Query: 193 GTTSRHLYGPEQGSFLNIEL 212
L+ EQ L +EL
Sbjct: 192 ------LWEVEQVRSLGVEL 205
>gi|429728459|ref|ZP_19263182.1| pyridine nucleotide-disulfide oxidoreductase [Peptostreptococcus
anaerobius VPI 4330]
gi|429149688|gb|EKX92659.1| pyridine nucleotide-disulfide oxidoreductase [Peptostreptococcus
anaerobius VPI 4330]
Length = 410
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EA+RCL C DAPC K CP + FI SI +N+ GAA+ I +N LG TC +V
Sbjct: 20 RTAMEEATRCLLCEDAPCSKGCPAGTNPGKFIRSIRMRNFKGAAETIRENNILGGTCALV 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP +LC C +E PI IG LQ+FA E K + +R P+ KV K+A IG
Sbjct: 80 CPYGNLCEKECARCGIDE-PIKIGKLQKFAIEQEKLFNMQTLRAPETKV---GKKVACIG 135
Query: 153 CGPASLSCATFLSRMGYDDITI--YEKNTYDMVTNVSP 188
GPASL+CA L++ G D I YEK + ++P
Sbjct: 136 SGPASLACAAKLAQAGLDVTIIEQYEKAGGVLTYGITP 173
>gi|333915497|ref|YP_004489229.1| dihydropyrimidine dehydrogenase [Delftia sp. Cs1-4]
gi|333745697|gb|AEF90874.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Delftia sp. Cs1-4]
Length = 455
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H L+ AL EA RC C DAPC +CPT ID+ +FI I+ N GAA+ I
Sbjct: 24 NFSD-AHPALNRSQALIEAERCYYCYDAPCTTACPTSIDVPAFIARIAQDNVRGAAREIL 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ NPLG C VCPT LC C E+ P+ IG LQ++AT+ F S P +
Sbjct: 83 TANPLGGMCSRVCPTEQLCEQACVRNTQEDKPVEIGALQRYATDAFM---ASDGAPLFQR 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYD 170
K+A++G GPA L+CA L+ G++
Sbjct: 140 AAATGRKVAVVGAGPAGLTCAHQLALQGHE 169
>gi|283832425|ref|ZP_06352166.1| putative NADPH-dependent glutamate synthase beta chain [Citrobacter
youngae ATCC 29220]
gi|291072079|gb|EFE10188.1| putative NADPH-dependent glutamate synthase beta chain [Citrobacter
youngae ATCC 29220]
Length = 413
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ +I P K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMKIYQPATKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + LS +GY D+TIYEK
Sbjct: 134 PAGLQASVTLSNLGY-DVTIYEKQ 156
>gi|407937546|ref|YP_006853187.1| glutamate synthase subunit beta [Acidovorax sp. KKS102]
gi|407895340|gb|AFU44549.1| glutamate synthase subunit beta [Acidovorax sp. KKS102]
Length = 449
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H L+ AL EA RC C DAPC +CPT IDI SFI I+ N GAA+AI
Sbjct: 24 NFGD-AHPPLTRAQALIEAERCYYCHDAPCATACPTGIDIPSFIHRIAQDNNRGAARAIL 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD-A 139
NPLG C VCPT LC C E+ P+ IG LQ++AT+ F +Q P
Sbjct: 83 EANPLGGMCARVCPTEVLCEQACVRNTNEDKPVEIGSLQRYATDAF----FAQPGAPLFQ 138
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA L+CA L+ G+ D+ ++E
Sbjct: 139 RAAATGKRVAVVGAGPAGLACAHGLAVRGH-DVVLFE 174
>gi|420373813|ref|ZP_14873876.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri 1235-66]
gi|391316836|gb|EIQ74221.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Shigella flexneri 1235-66]
Length = 413
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
N+ D + + A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I
Sbjct: 4 QNYLDELTSAFTPLLAIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETI 63
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+N LG C VCPT LC GC ++ PI+I LQ+F T+ F+ +I P
Sbjct: 64 RENNALGAVCARVCPTEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMKIYQPAT 121
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
K K+A+IG GPA L + LS +GY D+T++EK
Sbjct: 122 KT---QGKVAIIGAGPAGLQASVTLSNLGY-DVTLFEKQ 156
>gi|440227580|ref|YP_007334671.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium tropici CIAT 899]
gi|440039091|gb|AGB72125.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium tropici CIAT 899]
Length = 452
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L++ AL + RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLTKHEALVASDRCYFCYDAPCMTACPTSIDIPMFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++AT D +++ + A+
Sbjct: 80 DQNILGGMCARVCPTEQLCEQACVRNTAEERPVEIGRLQRYAT----DTAMAENKQFYAR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA+IG GPA L+CA L+ G+ D+TI++
Sbjct: 136 AASTGKKIAVIGAGPAGLACAHRLAVKGH-DVTIFD 170
>gi|307944818|ref|ZP_07660156.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Roseibium sp. TrichSKD4]
gi|307772032|gb|EFO31255.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Roseibium sp. TrichSKD4]
Length = 451
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L+ A+ EA RC C DAPC ++CPT IDI FI IS +N GAAK I
Sbjct: 22 KNFADL-HPLLAPHEAMVEADRCYFCYDAPCTQACPTSIDIPQFIRQISTENPAGAAKTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F++N LG C VCPT LC C AE P+ IG LQ++AT+ F M + P
Sbjct: 81 FAENILGGMCARVCPTETLCEQVCVREEAEGKPVKIGQLQRYATDHF--METHETTPFTR 138
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYD 170
K +IA++G GPA LSCA L+ G+D
Sbjct: 139 KAS-TGKRIAVVGAGPAGLSCAHSLAVEGHD 168
>gi|427429354|ref|ZP_18919389.1| Pyridine nucleotide-disulfide oxidoreductase [Caenispirillum
salinarum AK4]
gi|425880547|gb|EKV29243.1| Pyridine nucleotide-disulfide oxidoreductase [Caenispirillum
salinarum AK4]
Length = 466
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ +L +NF D H L ++ A+ EASRC C DAPC K+CPT IDI SFI I+ N
Sbjct: 9 LDAAALADNFAD-AHPPLDDKNAVIEASRCYYCYDAPCIKACPTGIDIPSFIKKITTGNL 67
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+A I S N +G C VCPT LC C A P+ IG LQ++AT+ G +
Sbjct: 68 KGSAADILSANIMGGMCARVCPTEILCEDKCVRNAEGHKPVEIGNLQRYATDKLFAAG-T 126
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
Q+ DA +IA++G GPA LSCA L+ +G+ D+T++E
Sbjct: 127 QLFERDAPT---GKRIAVVGGGPAGLSCAHRLAVLGH-DVTVFE 166
>gi|347751377|ref|YP_004858942.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Bacillus coagulans 36D1]
gi|347583895|gb|AEP00162.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Bacillus coagulans 36D1]
Length = 450
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 20/201 (9%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
F +++ LS + A++EA+RCL C DAPC K+CPT I + SFI I+ N G+A+AI
Sbjct: 10 FKEVRRD-LSAQEAVEEANRCLYCYDAPCTKACPTGIPVPSFIRKIATGNLKGSARAILE 68
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
NP+G TC VCPT +LC G C L PI IG LQ+ A G + K
Sbjct: 69 ANPMGATCARVCPTEELCEGACVLNELSL-PIMIGDLQRHAVNWAMQSGETLFE----KR 123
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPRIVKGT 194
K+A+IG GPA LS A L+R G+ +T+YE +TY +V P+ +
Sbjct: 124 TSNGMKVAIIGSGPAGLSAARELARHGF-GVTVYEAKEKAGGLDTYGIVPFRLPQEIP-- 180
Query: 195 TSRHLYGPEQGSFLNIELISE 215
L+ +Q + L +E+++E
Sbjct: 181 ----LWEADQVTALGVEILTE 197
>gi|326315757|ref|YP_004233429.1| dihydropyrimidine dehydrogenase (NAdP(+)) [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372593|gb|ADX44862.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 451
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D H L+ AL EA RC C +APC +CPT ID+ SFI I+ N GAA+AI
Sbjct: 24 RNFGD-AHPPLTRAQALIEAERCYYCYEAPCATACPTGIDVPSFIHRIAQGNERGAARAI 82
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
NPLG C VCPT LC C E+ P+ IG LQ++AT D +Q P
Sbjct: 83 LEANPLGGMCARVCPTEVLCEQACVRNVNEDKPVEIGALQRYAT----DAHFAQPGAPLF 138
Query: 140 KVDFP-DTKIALIGCGPASLSCATFLSRMGYDDI 172
P ++A++G GPA L+CA L+R G+D +
Sbjct: 139 TRSAPTGRRVAVVGAGPAGLACAHGLARRGHDVV 172
>gi|359791303|ref|ZP_09294166.1| dihydropyrimidine dehydrogenase subunit A, partial [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359252670|gb|EHK55885.1| dihydropyrimidine dehydrogenase subunit A, partial [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 328
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 1 MPEQSSLAGI--NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQI 58
MPE GI + + NF D+ H L AL EA RC C DAPC +CPT I
Sbjct: 1 MPEGQFKEGIAGDRLSPEKYAENFSDL-HPPLDRHEALVEADRCYFCYDAPCMNACPTSI 59
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
DI FI I+ N G+AK IF N LG C VCPT LC C AE P+ IG L
Sbjct: 60 DIPLFIRQIATGNPLGSAKTIFDQNILGGMCARVCPTETLCEEVCVREMAEGKPVQIGRL 119
Query: 119 QQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
Q++AT+V M + + K+A++G GPA L+CA L+R G+ D+TI E
Sbjct: 120 QRYATDVAMAMEKQFYK----RAQPTGRKVAVVGAGPAGLACAHRLARYGH-DVTILE 172
>gi|421846550|ref|ZP_16279697.1| dihydropyrimidine dehydrogenase subunit A [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|411772144|gb|EKS55782.1| dihydropyrimidine dehydrogenase subunit A [Citrobacter freundii
ATCC 8090 = MTCC 1658]
Length = 413
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ +I P K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMKIYQPATKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + LS +GY D+TI+EK
Sbjct: 134 PAGLQASVTLSNLGY-DVTIFEKQ 156
>gi|442770408|gb|AGC71124.1| pyridine nucleotide-disulfide oxidoreductase associated with
reductive pyrimidine catabolism [uncultured bacterium
A1Q1_fos_18]
Length = 441
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 98/178 (55%), Gaps = 22/178 (12%)
Query: 27 HTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLG 86
+ LS+ AL EA+RCL C DAPC ++CPT ID+ FI I+ N GAA+ I S N LG
Sbjct: 16 RSALSKDEALAEANRCLFCYDAPCMRACPTHIDVPLFIRQIATSNPGGAARTILSANILG 75
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT 146
+C VCPT LC G C L + PI IG LQ+FAT+ M + Q K+ P T
Sbjct: 76 ASCARVCPTEVLCEGACVLEDQHK-PIQIGPLQRFATD--HAMAVKQ------KILTPGT 126
Query: 147 ----KIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVT-NVSPRIVK 192
+ +IG GPA LSCA L ++GY + IYE NTY + ++P + +
Sbjct: 127 PKAGSVGIIGAGPAGLSCAAELLKLGYQSV-IYEAAERPGGLNTYGVAQYKMTPEVAQ 183
>gi|455644544|gb|EMF23644.1| dihydropyrimidine dehydrogenase subunit A [Citrobacter freundii GTC
09479]
Length = 413
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ +I P K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMKIYQPATKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + LS +GY D+TI+EK
Sbjct: 134 PAGLQASVTLSNLGY-DVTIFEKQ 156
>gi|120609660|ref|YP_969338.1| glutamate synthase subunit beta [Acidovorax citrulli AAC00-1]
gi|120588124|gb|ABM31564.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acidovorax citrulli AAC00-1]
Length = 451
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF D H L+ AL EA RC C +APC +CPT ID+ SFI I+ N GAA+AI
Sbjct: 24 HNFSD-AHPPLTRPQALIEAERCYYCYEAPCATACPTGIDVPSFIHRIAQGNERGAARAI 82
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV-FKDMGISQIRPPD 138
NPLG C VCPT LC C E+ P+ IG LQ++AT+ F G P
Sbjct: 83 LEANPLGGMCARVCPTEVLCEQACVRNVNEDKPVEIGALQRYATDAHFAQPGA----PLF 138
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYD 170
+ ++A++G GPA L+CA L+R G+D
Sbjct: 139 TRSASTGRRVAVVGAGPAGLACAHGLARRGHD 170
>gi|116626689|ref|YP_828845.1| glutamate synthase (NADPH) small subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|116229851|gb|ABJ88560.1| glutamate synthase (NADPH) small subunit [Candidatus Solibacter
usitatus Ellin6076]
Length = 437
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ F D+ H + A+ EA+RCL C DAPC +CPT ID+ FI IS N G+A A
Sbjct: 6 LERFPDL-HPAFDSQAAVAEANRCLYCFDAPCAAACPTHIDVPRFIKKISTANLRGSALA 64
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N LGL+C VCP LC G C ++ + PI IG LQ++A + F G R P
Sbjct: 65 ILDANILGLSCSRVCPVDVLCEGSCVMHGYNKNPIEIGRLQRYAMDAFYANG---ARLPV 121
Query: 139 AKVD-FPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
A + K+A +G GPASL+CA L R+G +TI++
Sbjct: 122 ANGNKAASAKVACVGGGPASLACAAELRRLGA-AVTIFD 159
>gi|340777859|ref|ZP_08697802.1| dihydropyrimidine dehydrogenase subunit A [Acetobacter aceti NBRC
14818]
Length = 447
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T L +NF D H LS AL EA RC C DAPC ++CPT IDI FI +I+ N
Sbjct: 11 LTEQELNHNFSD-AHPPLSHEQALVEAERCFYCYDAPCIEACPTSIDIPRFIRAIATGNM 69
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGI 131
G+A+ I N LG +C VCPT LC C EEG P+ IG LQ+ AT+ + G
Sbjct: 70 QGSARTILDSNILGGSCARVCPTEILCEQKCVHNTLEEGRPVRIGQLQRHATDWQMEHGG 129
Query: 132 SQIRPPDAKVDFPDT--KIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
R P+T ++A++G GPA L+CA L+ G+ D+ +Y+++
Sbjct: 130 QPFRRQ------PETGRRVAIVGAGPAGLACAHRLAMYGH-DVVLYDRHA 172
>gi|378826929|ref|YP_005189661.1| putative oxidoreductase [Sinorhizobium fredii HH103]
gi|365179981|emb|CCE96836.1| putative oxidoreductase [Sinorhizobium fredii HH103]
Length = 453
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ N G+AK IF
Sbjct: 21 NFSDL-HPPLDKHEALVAADRCYFCHDAPCMTACPTSIDIPLFIRQIATGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ+++T D+ + + + A+
Sbjct: 80 DQNILGGMCARVCPTETLCEQACVRNTAEERPVEIGRLQRYST----DVAMRENKQFYAR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+IA++G GPASL+CA L+ G+ D+ IY+
Sbjct: 136 AAATGRRIAVVGAGPASLACAHRLAVKGH-DVVIYD 170
>gi|421850874|ref|ZP_16283815.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus NBRC 101655]
gi|371458288|dbj|GAB29018.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus NBRC 101655]
Length = 447
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T L NF D H L+ AL EA RC C DAPC ++CPT IDI FI +I+ N
Sbjct: 11 LTEEELQKNFSD-AHPPLTHEQALVEAERCFYCYDAPCTEACPTSIDIPKFIHAIATGNM 69
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGI 131
G+A I N LG +C VCPT LC C EEG PI IG LQ+ AT+ + G
Sbjct: 70 QGSAHTILESNILGGSCARVCPTEILCEQKCVHNVREEGKPIRIGALQRHATDWQMEHGG 129
Query: 132 SQ-IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
IR P K+A++G GPA L+CA L+ G+ D+ +++K+
Sbjct: 130 QPFIRKP-----LTSRKVAIVGAGPAGLACAHRLALHGH-DVVLFDKH 171
>gi|162147297|ref|YP_001601758.1| oxidoreductase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785874|emb|CAP55445.1| putative pyridine nucleotide-disulphide oxidoreductase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 440
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N + L NF D H L +R A+ EA RC C DAPC ++CPT IDI FI I+
Sbjct: 8 NRLSPDVLARNFAD-AHPPLGDRQAVIEAERCYACYDAPCIEACPTGIDIPGFIRKIATG 66
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N G+A+ I N LG +C VCPT LC C ++ P++IG LQ+ AT D
Sbjct: 67 NLAGSARTILESNILGGSCARVCPTEILCEQACVRNTLDQKPLSIGALQRHAT----DWQ 122
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ Q R P + +IA++G GPA L+CA L+ G +D+T+++
Sbjct: 123 MRQGRQPFVRAAATGRRIAVVGAGPAGLACAHRLALHG-NDVTVFD 167
>gi|209544342|ref|YP_002276571.1| putative oxidoreductase [Gluconacetobacter diazotrophicus PAl 5]
gi|209532019|gb|ACI51956.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 440
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N + L NF D H L +R A+ EA RC C DAPC ++CPT IDI FI I+
Sbjct: 8 NRLSPDVLARNFAD-AHPPLGDRQAVIEAERCYACYDAPCIEACPTGIDIPGFIRKIATG 66
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N G+A+ I N LG +C VCPT LC C ++ P++IG LQ+ AT D
Sbjct: 67 NLAGSARTILESNILGGSCARVCPTEILCEQACVRNTLDQKPLSIGALQRHAT----DWQ 122
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ Q R P + +IA++G GPA L+CA L+ G +D+T+++
Sbjct: 123 MRQGRQPFVRAAATGRRIAVVGAGPAGLACAHRLALHG-NDVTVFD 167
>gi|440286906|ref|YP_007339671.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046428|gb|AGB77486.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Enterobacteriaceae bacterium strain FGI 57]
Length = 413
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQGCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC C+ ++ PI+I LQ+F T+ + G+ Q+ P +K K+A++G G
Sbjct: 79 TEKLCQAECSRSGIDK-PIDIARLQRFVTDFEQQTGM-QVYQPGSKT---LGKVAIVGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L+ +GY D+T++EK
Sbjct: 134 PAGLQASVTLTNLGY-DVTLFEKE 156
>gi|153007711|ref|YP_001368926.1| putative oxidoreductase [Ochrobactrum anthropi ATCC 49188]
gi|404317241|ref|ZP_10965174.1| dihydropyrimidine dehydrogenase subunit A [Ochrobactrum anthropi
CTS-325]
gi|151559599|gb|ABS13097.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum anthropi ATCC 49188]
Length = 500
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H L++ AL E+ RC C DAPC +CPT IDI FI I+ N GAAK I S
Sbjct: 37 FDDL-HPPLNKHEALVESDRCYYCYDAPCMNACPTSIDIPRFIRQINTGNAIGAAKTILS 95
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAK 140
+N LG C VCPT LC C +E P+ IG LQ++AT+V + G R PD
Sbjct: 96 ENILGGMCARVCPTETLCEEVCVRETSEGKPVKIGELQRYATDVLMETGNHPFKRAPDTG 155
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 156 -----KHIAIVGAGPAGISAAHRLAMYGH-QVTIFE 185
>gi|322433906|ref|YP_004216118.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Granulicella tundricola MP5ACTX9]
gi|321161633|gb|ADW67338.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Granulicella tundricola MP5ACTX9]
Length = 448
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V F D+ H + + AL EA+RCL C DAPC +CPT ID+ FI I+ +N G+A+
Sbjct: 16 VARFADL-HPSFDRQAALAEANRCLFCFDAPCMTACPTHIDVPKFIKKIASENLGGSART 74
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N +G +C CP LC G C ++ + PI I LQ+FA + F G + P
Sbjct: 75 ILDANVMGASCSRACPVEVLCEGACVMHRYNKQPIEIARLQRFAMDAFHAPGTNLPFTPA 134
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMG 168
A K+ALIG GPASL+CA L + G
Sbjct: 135 ADTGL---KVALIGAGPASLACAAELRKHG 161
>gi|251798658|ref|YP_003013389.1| oxidoreductase [Paenibacillus sp. JDR-2]
gi|247546284|gb|ACT03303.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Paenibacillus sp. JDR-2]
Length = 451
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 112/203 (55%), Gaps = 20/203 (9%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NF ++K + + A++E++RCL C DAPC K+CPT I+I SFI I+ N G+A
Sbjct: 10 SLRRNFAEVK-AGMKPKEAIEESNRCLYCYDAPCIKACPTGINIPSFIKKIASGNMKGSA 68
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+AI NP+G +C VCPT +LC G C L + + PI IG LQ++AT D I +
Sbjct: 69 RAIMEANPVGASCSRVCPTEELCEGACVLNHSSK-PIMIGDLQRYAT----DWAIRNEQV 123
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPR 189
K A+IG GPA LS A L+R G+ +T++E +T+ +V+ P+
Sbjct: 124 LFKAGSSNGKKAAVIGGGPAGLSAARELARFGF-AVTVFEAKEQAGGLDTHGIVSFRLPQ 182
Query: 190 IVKGTTSRHLYGPEQGSFLNIEL 212
+ L+ EQ L +E+
Sbjct: 183 EI------SLWEVEQVKQLGVEI 199
>gi|395230576|ref|ZP_10408880.1| putative NADPH-dependent glutamate synthase beta chain [Citrobacter
sp. A1]
gi|424731363|ref|ZP_18159947.1| pyridine nucleotide-disulfide oxidoreductase domain protein
[Citrobacter sp. L17]
gi|394715961|gb|EJF21746.1| putative NADPH-dependent glutamate synthase beta chain [Citrobacter
sp. A1]
gi|422894014|gb|EKU33829.1| pyridine nucleotide-disulfide oxidoreductase domain protein
[Citrobacter sp. L17]
Length = 413
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D +I SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKYIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ +I P K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMKIYQPATKT---LGKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + LS +GY D+TI+EK
Sbjct: 134 PAGLQASVTLSNLGY-DVTIFEKQ 156
>gi|126734203|ref|ZP_01749950.1| glutamate synthase, small subunit, putative [Roseobacter sp. CCS2]
gi|126717069|gb|EBA13933.1| glutamate synthase, small subunit, putative [Roseobacter sp. CCS2]
Length = 447
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NFDD+ H + A A RC C DAPC +CPT IDI FI IS AAK
Sbjct: 22 LAENFDDL-HAPYAPHEAAVAADRCYFCHDAPCVTACPTDIDIPLFIRQISTGTPESAAK 80
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
IF N LG C VCPT DLC C AE P+ IG LQ+ AT+ +++ R P
Sbjct: 81 TIFDQNILGGMCARVCPTEDLCEQACVRELAEGKPVEIGRLQRHATDTL----MAKQRHP 136
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ KIA++G GPA L+CA L+ G+ D+TIY+
Sbjct: 137 YDRAPETGKKIAVVGAGPAGLACAHRLAMHGH-DVTIYD 174
>gi|421852630|ref|ZP_16285316.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479134|dbj|GAB30519.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 444
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T L NF D H L+ AL EA RC C DAPC ++CPT IDI FI +I+ N
Sbjct: 8 LTEEELQKNFSD-AHPPLTHEQALVEAERCFYCYDAPCTEACPTSIDIPKFIHAIATGNM 66
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGI 131
G+A I N LG +C VCPT LC C EEG PI IG LQ+ AT+ + G
Sbjct: 67 QGSAHTILESNILGGSCARVCPTEILCEQKCVHNVREEGKPIRIGALQRHATDWQMEHGG 126
Query: 132 SQ-IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
IR P K+A++G GPA L+CA L+ G+ D+ +++K+
Sbjct: 127 QPFIRKP-----LTGRKVAIVGAGPAGLACAHRLALHGH-DVVLFDKH 168
>gi|260221586|emb|CBA30298.1| hypothetical protein Csp_C22850 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 450
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C DAPC +CPT ID+ SFI I+ N G+A+ I NPLG C VCP
Sbjct: 37 ALLEAERCLYCYDAPCATACPTSIDVPSFIKRIADGNLRGSAQTILDSNPLGGMCARVCP 96
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI--RPPDAKVDFPDTKIALIG 152
T +LC C E+ P+ IG LQ+ A + + Q+ R P K+A++G
Sbjct: 97 TENLCEAVCVRNTQEDRPVAIGRLQRHAVDALMESAKPQVFTRAP-----ATGKKVAVVG 151
Query: 153 CGPASLSCATFLSRMGYDDITIYEK------NTYDMVTNVSP 188
GPA L+CA L+R G+D + K N Y + + +P
Sbjct: 152 AGPAGLACAYTLARQGHDVVVFDAKPKAGGLNEYGLASYKTP 193
>gi|110634407|ref|YP_674615.1| putative oxidoreductase [Chelativorans sp. BNC1]
gi|110285391|gb|ABG63450.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chelativorans sp. BNC1]
Length = 450
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
F+ NF D+ H L A EA RC C DAPC ++CPT IDI FI IS N
Sbjct: 15 FSPEDYAQNFSDL-HPALDTHEARVEADRCYFCYDAPCMRACPTTIDIPLFIRQISTGNP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA+ IF N G C VCPT LC C AE P+ IG LQ+FAT D ++
Sbjct: 74 LGAARTIFDQNIFGGMCARVCPTETLCEEACVREHAEGKPVQIGRLQRFAT----DAAMA 129
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + + K+A++G GPA L+CA L+ G+ ++T+YE
Sbjct: 130 RGKRFYTRAAASGKKVAVVGAGPAGLACAHRLAMYGH-EVTVYE 172
>gi|430004448|emb|CCF20243.1| putative NADPH-dependent glutamate synthase protein, small chain
[Rhizobium sp.]
Length = 453
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF D+ H L + AL A RC C DAPC +CPT IDI FI IS N G+AK I
Sbjct: 20 SNFSDL-HPRLDKHEALVAADRCYFCYDAPCMTACPTAIDIPLFIRQISTGNPLGSAKTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F N LG C VCPT LC C AE+ P+ IG LQ++AT++ +M R
Sbjct: 79 FDQNILGGMCARVCPTETLCEQACVRNTAEDRPVEIGKLQRYATDIAMEMN----RQFYH 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA LSCA LS G+ D+ I++
Sbjct: 135 RAASSGRRVAVVGAGPAGLSCAHRLSMHGH-DVVIFD 170
>gi|418939699|ref|ZP_13493088.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium sp. PDO1-076]
gi|375053584|gb|EHS49974.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium sp. PDO1-076]
Length = 453
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L E AL + RC C DAPC +CPT IDI FI IS N G+AK I
Sbjct: 20 RNFADL-HPRLGEHEALVASDRCYFCHDAPCMTACPTAIDIPMFIRQISTGNPIGSAKTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F N LG C VCPT LC C AEE P+ IG LQ++AT++ D G P
Sbjct: 79 FDQNILGGMCARVCPTEQLCEESCVRNTAEERPVEIGRLQRYATDIAIDQGRQFYTPA-- 136
Query: 140 KVDFPDT--KIALIGCGPASLSCATFLSRMGYDDITIYE 176
P T +A++G GPA LS A L+ G+ +TIYE
Sbjct: 137 ----PSTGRTVAVVGAGPAGLSAAHRLALHGH-LVTIYE 170
>gi|429219879|ref|YP_007181523.1| NADPH-dependent glutamate synthase subunit beta-like oxidoreductase
[Deinococcus peraridilitoris DSM 19664]
gi|429130742|gb|AFZ67757.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Deinococcus peraridilitoris DSM 19664]
Length = 480
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
+S A+ EA+RCL C DAPC ++CPT IDI +FI I+ N G+A+ I N LG TC
Sbjct: 36 MSAHEAVVEANRCLYCYDAPCLQACPTHIDIPTFIRKIATGNLRGSARTILEANFLGGTC 95
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP +LC G C L E PI IG LQ+ A + ++ GI + ++A
Sbjct: 96 GRVCPVEELCEGACVLGKDHE-PIAIGRLQRHAVDYVQERGIEVFQAGARN----GRRVA 150
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYEKN 178
++G GPA +SC+ L+++GY ++T+ EK
Sbjct: 151 VVGSGPAGISCSAELAKLGY-EVTLLEKR 178
>gi|390960119|ref|YP_006423876.1| NADPH-dependent glutamate synthase subunit beta-like oxidoreductase
[Terriglobus roseus DSM 18391]
gi|390415037|gb|AFL90541.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Terriglobus roseus DSM 18391]
Length = 445
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+K +L + A+ EA+RCL C DAPC +CPT ID+ +FI I+ N G+A+ I
Sbjct: 12 RFSDLK-PSLLQGAAIAEANRCLYCFDAPCMNACPTHIDVPTFIKKIASGNRIGSARTIL 70
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG +C CP LC G C L+ PI IG LQ++A E D +++ P
Sbjct: 71 DANILGASCARACPVEVLCEGACVLHHQGREPIQIGLLQRYAMEGMHD---AKLPLPFTP 127
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPRIVKG 193
+ ++ALIG GPASL+CA L R G TIY+ NTY + P V
Sbjct: 128 AEDTGKRVALIGAGPASLACAAELRRNGI-AATIYDARPLPGGLNTYGIAEYKLPFGVA- 185
Query: 194 TTSRHLYGPEQGSFLNIELISE 215
L+ E L +E ++E
Sbjct: 186 -----LHEVELIRSLGVEFVAE 202
>gi|311278871|ref|YP_003941102.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Enterobacter cloacae SCF1]
gi|308748066|gb|ADO47818.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Enterobacter cloacae SCF1]
Length = 413
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC +SCP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQSCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ +I P K K+A++G G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFVTD-FEQQTAMRIYQPGRK---DKGKVAIVGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L + L +GY ++TI+EK
Sbjct: 134 PAGLQASVTLCNLGY-EVTIFEKE 156
>gi|222086789|ref|YP_002545323.1| oxidoreductase [Agrobacterium radiobacter K84]
gi|221724237|gb|ACM27393.1| NADPH-dependent glutamate synthase small chain protein
[Agrobacterium radiobacter K84]
Length = 453
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L++ AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLNDHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++AT D+ +++ + A+
Sbjct: 80 DQNILGGMCARVCPTEQLCEQDCVRNTAEERPVEIGRLQRYAT----DIAMAENKQFYAR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA++G GPA L+CA L+ G+ ++ I++
Sbjct: 136 AASSGKKIAVVGAGPAGLACAHRLAVKGH-EVVIFD 170
>gi|398376911|ref|ZP_10535092.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium sp. AP16]
gi|397727383|gb|EJK87808.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium sp. AP16]
Length = 453
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L++ AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLNDHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++AT D+ +++ + A+
Sbjct: 80 DQNILGGMCARVCPTEQLCEQDCVRNTAEERPVEIGRLQRYAT----DIAMAENKQFYAR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA++G GPA L+CA L+ G+ ++ I++
Sbjct: 136 AASSGKKIAVVGAGPAGLACAHRLAVKGH-EVVIFD 170
>gi|15966200|ref|NP_386553.1| oxidoreductase [Sinorhizobium meliloti 1021]
gi|334317206|ref|YP_004549825.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti AK83]
gi|384530330|ref|YP_005714418.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Sinorhizobium meliloti
BL225C]
gi|384537029|ref|YP_005721114.1| probabable glutamate synthase small chain protein [Sinorhizobium
meliloti SM11]
gi|407721505|ref|YP_006841167.1| oxidoreductase [Sinorhizobium meliloti Rm41]
gi|433614269|ref|YP_007191067.1| bifunctional NADPH-dependent glutamate synthase beta chain and
related oxidoreductase [Sinorhizobium meliloti GR4]
gi|15075470|emb|CAC47026.1| Probable glutamate synthase small chain [Sinorhizobium meliloti
1021]
gi|333812506|gb|AEG05175.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Sinorhizobium meliloti
BL225C]
gi|334096200|gb|AEG54211.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Sinorhizobium meliloti
AK83]
gi|336033921|gb|AEH79853.1| probabable glutamate synthase small chain protein [Sinorhizobium
meliloti SM11]
gi|407319737|emb|CCM68341.1| oxidoreductase [Sinorhizobium meliloti Rm41]
gi|429552459|gb|AGA07468.1| bifunctional NADPH-dependent glutamate synthase beta chain and
related oxidoreductase [Sinorhizobium meliloti GR4]
Length = 453
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H +L AL A RC C DAPC +CPT IDI FI I+ N G+AK IF
Sbjct: 21 NFSDL-HPSLDRHEALVAADRCYFCHDAPCMTACPTSIDIPLFIRQIATGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++AT D+ + + + ++
Sbjct: 80 DQNILGGMCARVCPTETLCEEACVRNTAEERPVEIGRLQRYAT----DIAMRENKQFYSR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A++G GPA L+CA L+ G+ D+ IY+
Sbjct: 136 AARSGRRVAVVGAGPAGLACAHRLAVKGH-DVVIYD 170
>gi|386723223|ref|YP_006189549.1| dihydropyrimidine dehydrogenase subunit A [Paenibacillus
mucilaginosus K02]
gi|384090348|gb|AFH61784.1| dihydropyrimidine dehydrogenase subunit A [Paenibacillus
mucilaginosus K02]
Length = 453
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 110/200 (55%), Gaps = 24/200 (12%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FD+I+ + AL+E++RCL C DAPC ++CPT I + +FI I+ + GAA+ I
Sbjct: 15 FDEIE-PGMRPGEALEESNRCLYCYDAPCIQACPTAIPVPTFIKQIATGHLKGAARTIML 73
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS--QIRPPDA 139
NP G +C VCPT +LC G C L A + PI IG LQ++AT+ G S Q P+
Sbjct: 74 ANPAGASCSRVCPTEELCEGACVLNDASK-PILIGRLQRYATDWAMKSGQSLLQAGAPNG 132
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSPRIVK 192
+ K A+IG GPA LS A L+R G+ +T+YE NTY +V+ P+ V
Sbjct: 133 R------KAAVIGAGPAGLSAARELARFGF-AVTVYEAKELGGGLNTYGIVSFRLPQEVP 185
Query: 193 GTTSRHLYGPEQGSFLNIEL 212
L+ EQ L +EL
Sbjct: 186 ------LWEVEQVRSLGVEL 199
>gi|85704752|ref|ZP_01035853.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Roseovarius sp. 217]
gi|85670570|gb|EAQ25430.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Roseovarius sp. 217]
Length = 442
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L NF D+ H L + AL A RC C DAPC +CPT IDI FI I+
Sbjct: 17 AAALQGNFTDL-HPPLDDHEALVAADRCYFCHDAPCITACPTSIDIPLFIRQIATGTPEA 75
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
AAK I S N LG C VCPT LC C AAE P+ IG LQ++AT+ D G+
Sbjct: 76 AAKTILSQNILGGMCARVCPTETLCEEACVREAAEGQPVLIGRLQRYATDRLMDKGVHPF 135
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
R + ++A++G GPA L+CA L+ G+ D+T+Y+
Sbjct: 136 R----RAAPTGRRVAVVGAGPAGLACAHRLAMKGH-DVTLYD 172
>gi|149201034|ref|ZP_01878009.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Roseovarius sp. TM1035]
gi|149145367|gb|EDM33393.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Roseovarius sp. TM1035]
Length = 442
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ A
Sbjct: 18 AALQGNFTDL-HPPLDDHEALVAADRCYFCHDAPCITACPTSIDIPLFIRQIATGTPEAA 76
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
AK I S N LG C VCPT LC C AAE P+ IG LQ++AT+ D G+
Sbjct: 77 AKTILSQNILGGMCARVCPTETLCEEACVREAAEGQPVLIGRLQRYATDTVMDQGVHPFT 136
Query: 136 P--PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P P + ++A++G GPA L+CA L+ G+ D+T+Y+
Sbjct: 137 PAAPTGR------RVAVVGAGPAGLACAHRLAMKGH-DVTLYD 172
>gi|239831127|ref|ZP_04679456.1| oxidoreductase [Ochrobactrum intermedium LMG 3301]
gi|239823394|gb|EEQ94962.1| oxidoreductase [Ochrobactrum intermedium LMG 3301]
Length = 502
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 88/155 (56%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H L++ AL E+ RC C DAPC +CPT IDI FI I+ N GAAK I S
Sbjct: 40 FDDL-HPPLTKHEALVESDRCYFCYDAPCMNACPTGIDIPMFIRQINAGNPVGAAKTILS 98
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C +E P+ IG LQ++AT+V + G P +
Sbjct: 99 ENILGGMCARVCPTETLCEEVCVREISEGKPVKIGELQRYATDVLMETG----NHPFKRA 154
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
D IA++G GPA +S A L+ G+ +TI+E
Sbjct: 155 PETDKHIAVVGAGPAGISAAHRLAMHGH-KVTIFE 188
>gi|418398725|ref|ZP_12972278.1| dihydropyrimidine dehydrogenase subunit A [Sinorhizobium meliloti
CCNWSX0020]
gi|359507169|gb|EHK79678.1| dihydropyrimidine dehydrogenase subunit A [Sinorhizobium meliloti
CCNWSX0020]
Length = 453
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H +L AL A RC C DAPC +CPT IDI FI I+ N G+AK IF
Sbjct: 21 NFSDL-HPSLDRHEALVAADRCYFCHDAPCMTACPTSIDIPLFIRQIATGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++AT D+ + + + ++
Sbjct: 80 DQNILGGMCARVCPTETLCEEACVRNTAEERPVEIGRLQRYAT----DIAMRENKQFYSR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A++G GPA L+CA L+ G+ D+ IY+
Sbjct: 136 AARSGRRVAVVGAGPAGLACAHRLAVKGH-DVVIYD 170
>gi|444309523|ref|ZP_21145160.1| dihydropyrimidine dehydrogenase subunit A [Ochrobactrum intermedium
M86]
gi|443487190|gb|ELT49955.1| dihydropyrimidine dehydrogenase subunit A [Ochrobactrum intermedium
M86]
Length = 499
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 88/155 (56%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H L++ AL E+ RC C DAPC +CPT IDI FI I+ N GAAK I S
Sbjct: 37 FDDL-HPPLTKHEALVESDRCYFCYDAPCMNACPTGIDIPMFIRQINAGNPVGAAKTILS 95
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C +E P+ IG LQ++AT+V + G P +
Sbjct: 96 ENILGGMCARVCPTETLCEEVCVREISEGKPVKIGELQRYATDVLMETG----NHPFKRA 151
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
D IA++G GPA +S A L+ G+ +TI+E
Sbjct: 152 PETDKHIAVVGAGPAGISAAHRLAMHGH-KVTIFE 185
>gi|395007458|ref|ZP_10391198.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Acidovorax sp. CF316]
gi|394314536|gb|EJE51433.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Acidovorax sp. CF316]
Length = 450
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
F D H L+ AL EA RC C DAPC +CPT IDI SFI I+ N GAA+AI
Sbjct: 23 TRFGD-AHPPLTRPQALIEAERCYYCHDAPCATACPTGIDIPSFIHRIAQDNNRGAARAI 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF---KDMGISQIRP 136
NPLG C VCPT LC C E+ P+ IG LQ++AT+ F + Q
Sbjct: 82 LEANPLGGMCARVCPTEVLCEQACVRNTNEDKPVEIGSLQRYATDAFFAKPGAPLFQRAA 141
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDI 172
P K ++A++G GPA L+CA L+ G+D +
Sbjct: 142 PTGK------RVAVVGAGPAGLACAHGLAVRGHDVV 171
>gi|227823014|ref|YP_002826986.1| oxidoreductase [Sinorhizobium fredii NGR234]
gi|227342015|gb|ACP26233.1| glutamate synthase [NADPH] large chain [Sinorhizobium fredii
NGR234]
Length = 453
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ N G+AK IF
Sbjct: 21 NFSDL-HPPLDKHEALVAADRCYFCHDAPCMTACPTSIDIPLFIRQIATGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ+++T D+ + + + A+
Sbjct: 80 DQNILGGMCARVCPTETLCEQACVRNTAEERPVEIGRLQRYST----DIAMRENKQFYAR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+IA++G GPA L+CA L+ G+ D+ IY+
Sbjct: 136 AAATGRRIAVVGAGPAGLACAHRLAVEGH-DVVIYD 170
>gi|338997974|ref|ZP_08636656.1| dihydropyrimidine dehydrogenase subunit A [Halomonas sp. TD01]
gi|338765105|gb|EGP20055.1| dihydropyrimidine dehydrogenase subunit A [Halomonas sp. TD01]
Length = 461
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
+ + SL NNF D+ H L+ R A+ E+ RCL C DAPC ++CP+ IDI SFI IS
Sbjct: 16 VGTYDPPSLANNFSDL-HPPLTHRQAMIESQRCLYCFDAPCVEACPSDIDIPSFIRQISE 74
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEVFKD 128
N GAA+ I N LG +C VCPT LC C + AE P+ IG LQ+ AT+ +
Sbjct: 75 NNINGAAETILEANILGGSCARVCPTEILCERSCVRNHDAECQPVLIGLLQRHATDHMQF 134
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + IA++G GPA LSCA L+ +G+ +TI+E
Sbjct: 135 ES-----HPFKRAANSGRHIAVVGAGPAGLSCAHRLAMLGH-QVTIFE 176
>gi|352105972|ref|ZP_08961083.1| dihydropyrimidine dehydrogenase subunit A [Halomonas sp. HAL1]
gi|350598064|gb|EHA14188.1| dihydropyrimidine dehydrogenase subunit A [Halomonas sp. HAL1]
Length = 459
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
+ + +L +NF D+ H L++R A+ E+ RCL C DAPC ++CP+ IDI SFI I
Sbjct: 14 VGTYDPQTLTHNFSDL-HPPLTQRQAMIESQRCLYCFDAPCVEACPSDIDIPSFIRQIGE 72
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEVFK- 127
KN GAA+ I N LG +C VCPT LC C + AE P+ IG LQ++AT+ +
Sbjct: 73 KNINGAAETILEANILGGSCARVCPTEILCERSCVRNHDAECQPVLIGLLQRYATDHMQF 132
Query: 128 DMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
D P + IA++G GPA LSCA L+ +G+ +TI+E
Sbjct: 133 D------SHPFKRAGSTGRHIAVVGAGPAGLSCAHRLAMLGH-QVTIFE 174
>gi|258543223|ref|YP_003188656.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01]
gi|384043145|ref|YP_005481889.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-12]
gi|384051662|ref|YP_005478725.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-03]
gi|384054769|ref|YP_005487863.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-07]
gi|384058004|ref|YP_005490671.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-22]
gi|384060645|ref|YP_005499773.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-26]
gi|384063937|ref|YP_005484579.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-32]
gi|384119946|ref|YP_005502570.1| pyridine nucleotide-disulfide oxidoreductase [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256634301|dbj|BAI00277.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-01]
gi|256637361|dbj|BAI03330.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-03]
gi|256640413|dbj|BAI06375.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-07]
gi|256643470|dbj|BAI09425.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-22]
gi|256646525|dbj|BAI12473.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-26]
gi|256649578|dbj|BAI15519.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-32]
gi|256652564|dbj|BAI18498.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655622|dbj|BAI21549.1| pyridine nucleotide-disulphide oxidoreductase [Acetobacter
pasteurianus IFO 3283-12]
Length = 447
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T L NF D H L+ AL EA RC C DAPC ++CPT IDI FI +I+ N
Sbjct: 11 LTEEELQKNFSD-AHPPLTHEQALVEAERCFYCYDAPCTEACPTSIDIPKFIHAIATGNM 69
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGI 131
G+A I N LG +C VCPT LC C EEG PI IG LQ+ AT+ + G
Sbjct: 70 QGSAHTILESNILGGSCARVCPTEILCEQKCVHNVREEGKPIRIGALQRHATDWQMEHGG 129
Query: 132 SQ-IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
IR P K+A++G GP+ L+CA L+ G+ D+ +++K+
Sbjct: 130 QPFIRKP-----LTGRKVAIVGAGPSGLACAHRLALHGH-DVVLFDKH 171
>gi|110680293|ref|YP_683300.1| glutamate synthase subunit beta [Roseobacter denitrificans OCh 114]
gi|109456409|gb|ABG32614.1| glutamate synthase, small subunit, putative [Roseobacter
denitrificans OCh 114]
Length = 444
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
++ L NF D+ H L A A RC C DAPC +CPT+IDI FI IS
Sbjct: 14 LSAEELARNFADL-HAPLEPHEAAVAADRCYFCHDAPCVTACPTEIDIPLFIRQISTGTP 72
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK IF N LG C VCPT DLC C AE P+ IG LQ++AT+ I
Sbjct: 73 EAAAKTIFDQNILGGMCARVCPTEDLCEQACVREMAEGKPVEIGRLQRYATDTLMQRDIH 132
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
P + +IA++G GPA LSCA L+ +G +D+ +Y+ +
Sbjct: 133 ----PYTRAAATGKRIAVVGAGPAGLSCAHRLALLG-NDVVVYDGH 173
>gi|56696652|ref|YP_167013.1| oxidoreductase [Ruegeria pomeroyi DSS-3]
gi|56678389|gb|AAV95055.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Ruegeria pomeroyi DSS-3]
Length = 445
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S L NFDD+ H + A A RC C DAPCQ +CPT+IDI FI I +
Sbjct: 16 LSSEELAANFDDL-HPAYAPHEAAVAADRCYFCYDAPCQTACPTEIDIPLFIRQIQTGHP 74
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AA+ I N LG C VCPT LC C AAE P+ IG LQ++AT+ G+
Sbjct: 75 EAAARTILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRYATDTLMARGVH 134
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
P + ++A++G GPA L+CA L+ +G+ D+ I+E
Sbjct: 135 ----PFTRAAPSGKRVAVVGAGPAGLACAHRLALLGH-DVVIHEAR 175
>gi|339503848|ref|YP_004691268.1| glutamate synthase (NADPH) small chain [Roseobacter litoralis Och
149]
gi|338757841|gb|AEI94305.1| putative glutamate synthase (NADPH) small chain [Roseobacter
litoralis Och 149]
Length = 444
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF D+ H L A A RC C DAPC +CPT+IDI FI IS AAK
Sbjct: 19 LAANFADL-HAPLEPHEAAVAADRCYFCHDAPCVTACPTEIDIPLFIRQISTGTPEAAAK 77
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
IF N LG C VCPT DLC C AE P+ IG LQ++AT+ I P
Sbjct: 78 TIFDQNILGGMCARVCPTEDLCEQACVREMAEGKPVEIGRLQRYATDTLMQRDIH----P 133
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IA++G GPA LSCA L+ +G +D+ IY+ +
Sbjct: 134 YTRAAATGKRIAVVGAGPAGLSCAHRLALLG-NDVVIYDGH 173
>gi|389874614|ref|YP_006373970.1| putative oxidoreductase [Tistrella mobilis KA081020-065]
gi|388531794|gb|AFK56988.1| putative oxidoreductase [Tistrella mobilis KA081020-065]
Length = 457
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF D H L R AL EASRC C DAPC K+CPT IDI SFI I+ N GAA
Sbjct: 17 LGRNFLD-AHPPLHGRAALVEASRCHFCWDAPCVKACPTSIDIPSFIRKIATDNMKGAAT 75
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I S N +G C VCPT LC C + ++ P+ IG LQ+ ATE +
Sbjct: 76 DILSANIMGGMCARVCPTEILCEQACVRHDQDDKPVEIGLLQRHATEWVYGSDTTPATQL 135
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA LSCA L+ +G+ D+T++E
Sbjct: 136 FRRAAPSGRRVAVVGGGPAGLSCAHRLAMLGH-DVTVFE 173
>gi|374311597|ref|YP_005058027.1| Glutamate synthase (NADPH) [Granulicella mallensis MP5ACTX8]
gi|358753607|gb|AEU36997.1| Glutamate synthase (NADPH) [Granulicella mallensis MP5ACTX8]
Length = 452
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
S + + F D+ H + A+ EA RCL C DAPC +CPT ID+ FI I+ N G
Sbjct: 14 SAEIASRFPDL-HPAFDKTAAVTEAHRCLYCFDAPCTAACPTHIDVPRFIKKIARDNLEG 72
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
+AK I N LG +C CP LC G C ++ + PI IG LQ+FA + + G
Sbjct: 73 SAKTILDANILGASCSRACPVEVLCEGACVMHRYNKQPIEIGRLQRFAMDALHESGAPLP 132
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMG 168
P +ALIG GPASL+CA L R G
Sbjct: 133 FSPGKDT---GKSVALIGGGPASLACAAELRRRG 163
>gi|90418416|ref|ZP_01226328.1| glutamate synthase, beta subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90338088|gb|EAS51739.1| glutamate synthase, beta subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 478
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF DI H L + AL EA RC C DAPC +CPT IDI FI I N GAAK
Sbjct: 24 LAGNFSDI-HPPLEQHEALVEADRCYFCYDAPCMTACPTSIDIPLFIREIQAGNPTGAAK 82
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I S N LG C VCPT LC C E P+ IG LQ++AT+ + G P
Sbjct: 83 TILSANILGGMCARVCPTETLCEEVCVREVGEGKPVKIGLLQRYATDHLMEAG----EHP 138
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + IA++G GP+ LSCA L+ G+ D+T+++
Sbjct: 139 FTRAEPTGRTIAVVGAGPSGLSCAHRLALHGH-DVTLFD 176
>gi|118592956|ref|ZP_01550344.1| Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding
site:Adrenodoxin reductase:Pyridine [Stappia aggregata
IAM 12614]
gi|118434490|gb|EAV41143.1| Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding
site:Adrenodoxin reductase:Pyridine [Stappia aggregata
IAM 12614]
Length = 459
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L + A EA RC C DAPC ++CPT IDI FI IS N GAAK I
Sbjct: 33 ENFSDL-HPLLDQHEAQVEADRCYFCYDAPCMQACPTSIDIPQFIRQISTGNPTGAAKTI 91
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP-PD 138
F+ N LG C VCPT LC C AE P+ IG LQ+++T+ F +S+ P
Sbjct: 92 FAQNILGGMCARVCPTETLCEQVCVREVAEGKPVKIGQLQRYSTDHF----MSEFSSTPF 147
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A++G GPA LSCA L+ G+ ++T+++
Sbjct: 148 TRAAATGKKVAVVGAGPAGLSCAHRLAVHGH-EVTLFD 184
>gi|398354736|ref|YP_006400200.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Sinorhizobium fredii USDA 257]
gi|390130062|gb|AFL53443.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
[Sinorhizobium fredii USDA 257]
Length = 453
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ N G+AK I
Sbjct: 21 NFSDL-HPPLDKHEALVAADRCYFCHDAPCMTACPTSIDIPLFIRQIATGNPIGSAKTIL 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++AT D+ + + + A+
Sbjct: 80 DQNILGGMCARVCPTETLCEQACVRNTAEERPVEIGRLQRYAT----DIAMRENKQFYAR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A++G GPA L+CA L+ G+ D+ IY+
Sbjct: 136 SARSGQKVAVVGAGPAGLACAHRLAVKGH-DVVIYD 170
>gi|89055204|ref|YP_510655.1| putative oxidoreductase [Jannaschia sp. CCS1]
gi|88864753|gb|ABD55630.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Jannaschia sp. CCS1]
Length = 446
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ L NF D+ H L AL A RC C DAPC +CPT IDI FI I+
Sbjct: 15 LEATELAQNFSDL-HAPLDGHEALVAADRCYFCHDAPCITACPTSIDIPLFIRQIATGTP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AA+ I N LG C VCPT LC C AAE P+ IG LQ++AT++ D G+
Sbjct: 74 EAAARTILDQNILGGMCARVCPTETLCEEACVREAAEGKPVLIGQLQRYATDIVMDAGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + + K+A++G GPA L+CA L+ G+ + I++K
Sbjct: 134 ----PFQRAEVTGKKVAVVGAGPAGLACAHRLAMHGH-SVDIFDKRA 175
>gi|84514682|ref|ZP_01002046.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Loktanella vestfoldensis SKA53]
gi|84511733|gb|EAQ08186.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Loktanella vestfoldensis SKA53]
Length = 442
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L NF D+ H L A A RC C DAPC +CPT IDI FI IS AA
Sbjct: 18 TLAQNFADL-HAPLDRHEARVAADRCYFCYDAPCVTACPTSIDIPLFIRQISTGTPDAAA 76
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
K IF N LG C VCPT DLC C AAE P+ IG LQ++AT+ +++
Sbjct: 77 KTIFDQNILGGMCARVCPTEDLCEQACVREAAEGKPVEIGRLQRYATDTL----MAKQSH 132
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P ++ +A++G GPA L+CA L+ G+ D+TI++ T
Sbjct: 133 PYSRAAPTGKTVAVVGAGPAGLACAHRLAMYGH-DVTIFDAQT 174
>gi|222149524|ref|YP_002550481.1| putative oxidoreductase [Agrobacterium vitis S4]
gi|221736506|gb|ACM37469.1| glutamate synthase beta chain protein [Agrobacterium vitis S4]
Length = 475
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF D+ H L + AL + RC C DAPC +CPT IDI FI IS N G+AK
Sbjct: 41 VKNFSDL-HPRLGDHEALVASDRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPTGSAKT 99
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
IF N LG C VCPT LC C AEE P+ IG LQ++AT++ + G Q
Sbjct: 100 IFDQNILGGMCARVCPTEQLCEEACVRNTAEERPVEIGRLQRYATDLAIEHG-HQFYTAA 158
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
A IA++G GPA L+CA L+ G+ +TIY+
Sbjct: 159 AST---GKTIAVVGAGPAGLACAHRLAMHGH-SVTIYD 192
>gi|254500525|ref|ZP_05112676.1| Pyridine nucleotide-disulphide oxidoreductase domain protein
[Labrenzia alexandrii DFL-11]
gi|222436596|gb|EEE43275.1| Pyridine nucleotide-disulphide oxidoreductase domain protein
[Labrenzia alexandrii DFL-11]
Length = 462
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L A EA RC C DAPC ++CPT IDI FI IS N G+AK I
Sbjct: 36 ENFSDL-HPLLEPHEAQVEADRCYFCYDAPCMQACPTSIDIPQFIRQISTGNPTGSAKTI 94
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F N LG C VCPT LC C AE P+ IG LQ++AT+ + +Q P
Sbjct: 95 FDQNILGGMCARVCPTETLCEQVCVREIAEGKPVQIGQLQRYATDHYMAENETQ---PYQ 151
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------TYDMVTNVS 187
+ K+A++G GPA L+CA L+ G+ D+T+++ +Y V N +
Sbjct: 152 RAASTGKKVAVVGAGPAGLACAHRLAMHGH-DVTLFDAREKAGGLNEFGIASYKSVDNFA 210
Query: 188 PRIVKGTTSRHLYGPEQGSFL--NIELISEKTAYQWVY 223
R V+ S + GS L N+ L + +Y V+
Sbjct: 211 AREVEFVLSIGGIELKTGSRLGDNLILADLRASYDAVF 248
>gi|345304421|ref|YP_004826323.1| glutamate synthase (NADPH) [Rhodothermus marinus SG0.5JP17-172]
gi|345113654|gb|AEN74486.1| Glutamate synthase (NADPH) [Rhodothermus marinus SG0.5JP17-172]
Length = 457
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 7/155 (4%)
Query: 26 KHTTLSERGALKEASRCLKCAD----APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
+ L++ AL EA+RCL+C APC ++CPT IDI FI +I + +A+ IF
Sbjct: 14 ERPRLTDEQALLEAARCLECGRDGRPAPCIEACPTHIDIPGFIRAIREGDPLHSARIIFE 73
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
N LG TC VCP LC G C L + P+ IG LQ++AT+ + G ++I P +V
Sbjct: 74 ANVLGGTCARVCPVEALCEGACVLTHEKRRPVAIGRLQRYATDAALEAG-AEIHPRPRRV 132
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + ++G GPA L+CA L+R+G+ ++ +YE
Sbjct: 133 RQP-LSVGVVGAGPAGLACAAELARLGH-EVIVYE 165
>gi|268318124|ref|YP_003291843.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhodothermus marinus DSM 4252]
gi|262335658|gb|ACY49455.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodothermus marinus DSM 4252]
Length = 457
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 92/155 (59%), Gaps = 7/155 (4%)
Query: 26 KHTTLSERGALKEASRCLKCAD----APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
+ L++ AL EA+RCL+C APC ++CPT IDI FI +I + +A+ IF
Sbjct: 14 ERPRLTDDQALLEAARCLECGRDGRPAPCIEACPTHIDIPGFIRAIREGDPLHSARIIFE 73
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
N LG +C VCP LC G C L + P+ IG LQ++AT+ + G ++I P +V
Sbjct: 74 ANVLGGSCARVCPVEALCEGACVLTHEKRRPVAIGRLQRYATDAALEAG-AEIHPRPRRV 132
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+P + ++G GPA L+CA L+R+G+ ++ +YE
Sbjct: 133 RWP-LSVGVVGAGPAGLACAAELARLGH-EVIVYE 165
>gi|359395080|ref|ZP_09188133.1| Dihydropyrimidine dehydrogenase [Halomonas boliviensis LC1]
gi|357972327|gb|EHJ94772.1| Dihydropyrimidine dehydrogenase [Halomonas boliviensis LC1]
Length = 459
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
+ + +L +NF D+ H L+ R A+ E+ RCL C DAPC ++CP++IDI SFI IS
Sbjct: 14 VGTYDPDTLASNFSDL-HPPLTHRQAMIESQRCLYCFDAPCVEACPSEIDIPSFIRQISE 72
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEVFKD 128
N GAA+ I N LG +C VCPT LC C + AE P+ IG LQ+ AT+ +
Sbjct: 73 NNINGAAETILEANILGGSCARVCPTEILCERSCVRNHDAECQPVLIGLLQRHATDHMQF 132
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
G P + +A++G GPA LSCA L+ +G+ ++I+E
Sbjct: 133 EG-----HPFKRAASTGRHVAVVGAGPAGLSCAHRLAMLGH-QVSIFE 174
>gi|256422462|ref|YP_003123115.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chitinophaga pinensis DSM 2588]
gi|256037370|gb|ACU60914.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chitinophaga pinensis DSM 2588]
Length = 453
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N T+ +F DI + A+ +A+RCL C DAPC KSCPT I++ FI I+
Sbjct: 6 NRLTAEEYEQHFSDIHPPFETRDAAMVDANRCLFCYDAPCTKSCPTGINVPKFIKQITTD 65
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N GAA I S N +G C VCP LC G C EE I I LQ++ATE +
Sbjct: 66 NLRGAAYTILSSNIMGGGCAKVCPVEKLCEGACVYNLREEEAIPIARLQRYATEKAIE-- 123
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ + + KV K+A+IG GPA LSCA LSR G D+TI+E+
Sbjct: 124 -EKWQLFERKVTI-GKKVAVIGAGPAGLSCAHALSREGV-DVTIFERE 168
>gi|398844038|ref|ZP_10601146.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM84]
gi|398254962|gb|EJN40011.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM84]
Length = 455
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 115/226 (50%), Gaps = 30/226 (13%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 SLAEQFSDLA-PPLTARQAAVESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + G S+
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYA---LDNAGFSE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------TYDMV 183
P + +IA++G GPA LSCA L+ G+ D+ ++E + Y +V
Sbjct: 131 HPFQRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEASEKAGGLNEYGIARYKLV 189
Query: 184 TNVSPRIVK------GTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
+ + R V G RH G GS L + + E+ Y V+
Sbjct: 190 DDYAQREVDFLLGIGGIEVRH--GQRLGSNLGLAELREQ--YDAVF 231
>gi|386855848|ref|YP_006260025.1| Glutamate synthase small subunit protein [Deinococcus gobiensis
I-0]
gi|379999377|gb|AFD24567.1| Glutamate synthase small subunit protein [Deinococcus gobiensis
I-0]
Length = 484
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 13/158 (8%)
Query: 38 EASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSD 97
EA+RCL C DAPC ++CPT IDI +FI I N G+A+ I N LG TC VCP +
Sbjct: 38 EANRCLYCYDAPCMQACPTHIDIPTFIRKIGTGNLRGSARTILESNFLGGTCARVCPVQE 97
Query: 98 LCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPAS 157
LC G C L A+ PI IG LQ+ A + ++ G+S P A ++A++G GPA
Sbjct: 98 LCEGACVL-GADHKPIQIGRLQRHAVDHVQERGLSLFTPAPAT----GRRVAVVGSGPAG 152
Query: 158 LSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
+S A L++ G+ +T+ EK +TY +++ P
Sbjct: 153 ISAAAELAKAGH-AVTLLEKRELAGGLSTYGIISLREP 189
>gi|114769063|ref|ZP_01446689.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Rhodobacterales bacterium HTCC2255]
gi|114549980|gb|EAU52861.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Rhodobacterales bacterium HTCC2255]
Length = 444
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF+D+ H LS AL + RC C DAPC +CPT IDI FI I+ +AK
Sbjct: 20 LNKNFEDL-HAPLSNHEALVASDRCYFCHDAPCMTACPTSIDIPLFIRQIATGTTDASAK 78
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I S N LG C VCPT LC C +E P+ IG LQ+FAT+ I P
Sbjct: 79 TILSQNILGGMCARVCPTETLCEEACVREVSEGKPVEIGRLQRFATDNLMAKNIH----P 134
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+ +G+ +ITIYE
Sbjct: 135 FSRGSKSGKKVAVIGAGPAGLACAHKLATLGH-EITIYE 172
>gi|121611068|ref|YP_998875.1| glutamate synthase subunit beta [Verminephrobacter eiseniae EF01-2]
gi|121555708|gb|ABM59857.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Verminephrobacter eiseniae EF01-2]
Length = 477
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T NF H L+ AL EA RC C DAPC +CPT ID+ SFI I+ N
Sbjct: 16 LTPADYAANFG-AAHPPLTRPRALIEAERCYYCHDAPCTTACPTGIDVPSFIQRIAQDND 74
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA+AI NPLG C VCPT LC C E+ P+ IGGLQ++AT+ F +
Sbjct: 75 RGAARAILQANPLGGICARVCPTELLCEQACVRNTHEDKPVAIGGLQRYATDAFFAHPGA 134
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
P + ++A++G GPA L+CA L+ G+ + ++E
Sbjct: 135 ---PLFQRAAATGRRVAVVGAGPAGLACAHGLALRGH-AVVLFEAR 176
>gi|349687116|ref|ZP_08898258.1| dihydropyrimidine dehydrogenase subunit A [Gluconacetobacter
oboediens 174Bp2]
Length = 449
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MP+ +A T L NF D H L+ A+ EA RC C DAPC ++CPT IDI
Sbjct: 1 MPQGPDIA-PGRLTDVELALNFSD-AHPPLTHAQAVVEADRCFYCYDAPCIEACPTGIDI 58
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQ 119
FI +I+ N G+A+ I N LG +C VCPT LC C EEG PI IG LQ
Sbjct: 59 PRFIRAIATDNMAGSARIILESNILGGSCARVCPTEILCEQKCVHNTREEGQPIRIGLLQ 118
Query: 120 QFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ AT+ D G P + +IA++G GPA L+CA L+ G+ D+ I++++
Sbjct: 119 RHATDWQMDHGGQ----PFTRAAPTGQRIAVVGAGPAGLACAHRLAMHGH-DVVIHDRHA 173
>gi|254477604|ref|ZP_05090990.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ruegeria sp. R11]
gi|214031847|gb|EEB72682.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ruegeria sp. R11]
Length = 444
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
++ + +NF D+ H A A RC C DAPC +CPT IDI FI I +
Sbjct: 15 LSASEIADNFGDL-HPQYEAHEAAVAADRCYFCYDAPCMTACPTSIDIPQFIREIQAGHP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK I N LG C VCPT LC C AAE P+ IG LQ++AT+ + G+
Sbjct: 74 ESAAKTILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRYATDTLMEKGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + + K+A++G GPA LS A L+ +G+ D+ +Y+ +
Sbjct: 134 ----PFGRAEATGKKVAIVGAGPAGLSAAHRLAMLGH-DVVVYDAKS 175
>gi|347759613|ref|YP_004867174.1| pyridine nucleotide-disulfide oxidoreductase [Gluconacetobacter
xylinus NBRC 3288]
gi|347578583|dbj|BAK82804.1| pyridine nucleotide-disulfide oxidoreductase [Gluconacetobacter
xylinus NBRC 3288]
Length = 450
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MP+ +A + L NF D H L+ A+ EA RC C DAPC ++CPT IDI
Sbjct: 1 MPQGPDIA-PGRLSDTELALNFSD-AHPPLTHAQAVVEADRCFYCYDAPCIEACPTGIDI 58
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQ 119
FI +I+ N G+A+ I N LG +C VCPT LC C EEG PI IG LQ
Sbjct: 59 PRFIRAIATDNMAGSARVILESNILGGSCARVCPTEILCEQKCVHNTREEGQPIRIGMLQ 118
Query: 120 QFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ AT+ D G P + +IA++G GPA L+CA L+ G+ D+ I++++
Sbjct: 119 RHATDWQMDHGGQ----PFTRAPSTGRRIAIVGAGPAGLACAHRLAMHGH-DVMIFDRHA 173
>gi|414342596|ref|YP_006984117.1| dihydropyrimidine dehydrogenase subunit A [Gluconobacter oxydans
H24]
gi|411027931|gb|AFW01186.1| dihydropyrimidine dehydrogenase subunit A [Gluconobacter oxydans
H24]
Length = 452
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H LS A EA RC C DAPC ++CPT IDI FI +I+ N GA++ I
Sbjct: 20 NFAD-AHPGLSHEQAALEADRCFYCYDAPCVEACPTGIDIPRFIKAIASDNLAGASRTIL 78
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGISQIRPPDA 139
N LG +C VCPT LC C A E + IG LQ+FAT D ++Q P
Sbjct: 79 QSNILGGSCARVCPTEILCEQKCVHTAIEANHAVRIGALQRFAT----DWQMNQTAHPFQ 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ ++A++G GPA L+CA L+ G+ D+TI++++
Sbjct: 135 RAKSTGRRVAVVGAGPAGLACAHRLAMHGH-DVTIFDRH 172
>gi|407771136|ref|ZP_11118498.1| dihydropyrimidine dehydrogenase subunit A [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407285855|gb|EKF11349.1| dihydropyrimidine dehydrogenase subunit A [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 454
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+ F D+ H S A+ E++RCL C DAPC +CPT IDI FI IS N GAAK I
Sbjct: 28 DGFSDL-HPAYSTLQAMAESNRCLYCYDAPCVTACPTSIDIPGFIRKISTGNPDGAAKTI 86
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N +G TC CPT LC C +E+ + IG LQ+FA + M ++ P
Sbjct: 87 LSANIMGGTCARACPTEVLCEQACVRNVSEDVAVEIGSLQRFAVDHL--MARDELPHPFK 144
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ +IA++G GPA LSCA + +G+ D+T++E
Sbjct: 145 RAPLTGKQIAVVGAGPAGLSCAHRAAMLGH-DVTVFE 180
>gi|150397560|ref|YP_001328027.1| putative oxidoreductase [Sinorhizobium medicae WSM419]
gi|150029075|gb|ABR61192.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Sinorhizobium medicae WSM419]
Length = 453
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI I+ N G+AK IF
Sbjct: 21 NFSDL-HAPLDRHEALVAADRCYFCHDAPCMTACPTAIDIPLFIRQIATGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AEE P+ IG LQ++A+ D+ +++ + +
Sbjct: 80 DQNILGGMCARVCPTETLCEEACVRNTAEERPVEIGRLQRYAS----DIAMTENKQFYTR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A++G GPA L+CA L+ G+ D+ IY+
Sbjct: 136 SARTGRRVAVVGAGPAGLACAHRLAVKGH-DVVIYD 170
>gi|410944932|ref|ZP_11376673.1| dihydropyrimidine dehydrogenase subunit A [Gluconobacter frateurii
NBRC 101659]
Length = 452
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H LS+ A EA RC C DAPC ++CPT IDI FI +I+ N GA++ I
Sbjct: 20 NFAD-AHPGLSQEQAALEADRCFYCYDAPCVEACPTGIDIPRFIKAIASDNLAGASRTIL 78
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGISQIRPPDA 139
N LG +C VCPT LC C A E + IG LQ+FAT D ++Q P
Sbjct: 79 QSNILGGSCARVCPTEILCEQKCVHTAIEANHAVRIGALQRFAT----DWQMNQSAHPFQ 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ + ++A++G GPA L+CA L+ G+ D+TI++++
Sbjct: 135 RGESTGRRVAVVGAGPAGLACAHRLAMRGH-DVTIFDRH 172
>gi|328542364|ref|YP_004302473.1| pyridine nucleotide-disulfide oxidoreductase [Polymorphum gilvum
SL003B-26A1]
gi|326412111|gb|ADZ69174.1| Pyridine nucleotide-disulfide oxidoreductase, class-II:NAD binding
site:Adrenodoxin reductase:Pyridine [Polymorphum gilvum
SL003B-26A1]
Length = 455
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
T NF D+ H L A EA RC C DAPC ++CPT IDI FI I+ N
Sbjct: 15 LTPDQYARNFCDL-HPRLDPHEAQVEADRCYFCHDAPCVQACPTSIDIPLFIRQIATGNP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+A+ IF+ N LG C VCPT LC C AE+ P+ IG LQ++AT+ + D +
Sbjct: 74 TGSARTIFAQNILGGMCARVCPTETLCEQACVRNEAEDKPVKIGELQRYATDHYMD---T 130
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + ++A++G GPA LSCA L+ G+ ++TI++
Sbjct: 131 HATTPFTRAAPTGKRVAVVGAGPAGLSCAHRLAVHGH-EVTIFD 173
>gi|445495120|ref|ZP_21462164.1| NAD-dependent dihydropyrimidine dehydrogenase YeiT
[Janthinobacterium sp. HH01]
gi|444791281|gb|ELX12828.1| NAD-dependent dihydropyrimidine dehydrogenase YeiT
[Janthinobacterium sp. HH01]
Length = 456
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL +F D+ L+ R A E+SRCL C DAPC + CP+ ID+ SFI +I +N GAA
Sbjct: 18 SLAKHFTDLA-PALNARQAAIESSRCLYCYDAPCTRICPSDIDVASFIRNIHDENINGAA 76
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
I N LG +C VCPT LC C + AE P+ IG LQ++A + +M I++
Sbjct: 77 VGILKQNILGGSCSRVCPTEILCEDACVRNHDAEGQPVKIGLLQRYAID---NMTITE-- 131
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + KIA++G GPA LSCA L+ +G +D+ I+E
Sbjct: 132 HPFKRAASTGKKIAVVGAGPAGLSCAHRLAMLG-NDVVIFE 171
>gi|453328832|dbj|GAC88929.1| oxidoreductase [Gluconobacter thailandicus NBRC 3255]
Length = 452
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D H LS A EA RC C DAPC ++CPT IDI FI +I+ N GA++ I
Sbjct: 20 NFAD-AHPGLSHEQAALEADRCFYCYDAPCVEACPTGIDIPRFIKAIASDNLAGASRTIL 78
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGISQIRPPDA 139
N LG +C VCPT LC C A E + IG LQ+FAT D ++Q P
Sbjct: 79 QSNILGGSCARVCPTEILCEQKCVHTAIEANHAVRIGALQRFAT----DWQMNQTAHPFQ 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ ++A++G GPA L+CA L+ G+ D+TI++++
Sbjct: 135 REKSTGRRVAVVGAGPAGLACAHRLAMHGH-DVTIFDRH 172
>gi|359786716|ref|ZP_09289809.1| dihydropyrimidine dehydrogenase subunit A [Halomonas sp. GFAJ-1]
gi|359296010|gb|EHK60266.1| dihydropyrimidine dehydrogenase subunit A [Halomonas sp. GFAJ-1]
Length = 459
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
+ + +L +NF D+ H L+ R A+ E+ RCL C DAPC ++CP++IDI SFI IS
Sbjct: 14 VGTYDPEALKHNFSDL-HPPLTPRQAIIESQRCLYCYDAPCVEACPSEIDIPSFIRQISE 72
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEVFKD 128
N GAA+ I N LG +C VCPT LC C + AE P+ IG LQ+ AT+ +
Sbjct: 73 SNINGAAETILEANILGGSCARVCPTEILCERSCVRNHDAECQPVLIGLLQRHATD---N 129
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
M P + IA++G GPA LSCA L+ +G+ +TI+E
Sbjct: 130 MQFES--HPFKRAATTGRHIAVVGAGPAGLSCAHRLAMLGH-QVTIFE 174
>gi|384915902|ref|ZP_10016107.1| NADPH-dependent glutamate synthase beta chain or related
oxidoreductase [Methylacidiphilum fumariolicum SolV]
gi|384526764|emb|CCG91978.1| NADPH-dependent glutamate synthase beta chain or related
oxidoreductase [Methylacidiphilum fumariolicum SolV]
Length = 474
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LS A+ EASRCL C + PC +CPT I+I F+ I + GAA+ I N LG TC
Sbjct: 56 LSLNAAIGEASRCLYCWNPPCVNACPTGIEIPKFVKRIETGDIRGAAEVILKANFLGGTC 115
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDF-PDTKI 148
G VCP +LC G C L ++ ++IG LQ+FA + F M Q P + K+
Sbjct: 116 GRVCPVEELCEGACVLTKLKKPSVSIGRLQRFAIDYFWAM---QKLPSQWHIQTQKKKKV 172
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYEKN 178
A++G GPA LSCA L+++G + + I EKN
Sbjct: 173 AIVGSGPAGLSCAATLAQLGIEAV-ILEKN 201
>gi|254437387|ref|ZP_05050881.1| Pyridine nucleotide-disulphide oxidoreductase domain protein
[Octadecabacter antarcticus 307]
gi|198252833|gb|EDY77147.1| Pyridine nucleotide-disulphide oxidoreductase domain protein
[Octadecabacter antarcticus 307]
Length = 444
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L NF D+ H L A A RC C DAPC +CPT IDI FI I+ AA
Sbjct: 19 LQENFADL-HAPLDRHEAAVAADRCYFCHDAPCVTACPTDIDIPLFIRQIATGTPDAAAN 77
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
IF N LG C VCPT DLC C AE P+ IG LQ+FAT++ G+ P
Sbjct: 78 TIFEMNILGGMCARVCPTEDLCEQACVRELAEGKPVEIGRLQRFATDIVMAKGVM----P 133
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + IA++G GPA LSCA L+ +G +D+T+Y+
Sbjct: 134 FNRAEPTGKNIAVVGAGPAGLSCAHRLAMLG-NDVTVYD 171
>gi|398890314|ref|ZP_10643951.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM55]
gi|398188278|gb|EJM75586.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM55]
Length = 455
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L ++F D+ L+ER A EASRCL C DAPC +CP++IDI SFI +I+ N
Sbjct: 14 SAAALASHFTDLA-PPLNERQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIAQDNVQ 72
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + + S
Sbjct: 73 GAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVMIGLLQRYAVD---NAHFS 129
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 130 A--HPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|88799394|ref|ZP_01114972.1| glutamate synthase, small subunit, putative [Reinekea blandensis
MED297]
gi|88777933|gb|EAR09130.1| glutamate synthase, small subunit, putative [Reinekea sp. MED297]
Length = 489
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 12/158 (7%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
F DI + L+ R A EASRC C DAPC K+CP+ IDI SFI SI +++ GAAK I+S
Sbjct: 60 FKDI-NPALTSRQASFEASRCYYCYDAPCVKACPSDIDIPSFIASIHNEDLEGAAKTIYS 118
Query: 82 DNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEV--FKDMGISQIRPPD 138
+N LG +C VCPT LC C AE P+ IG LQ+ AT+ F + IS+ P
Sbjct: 119 ENILGGSCARVCPTEILCEQACVRNDEAECAPVLIGLLQRHATDQAEFSEHPISRA-PTT 177
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K +IA+IG GPA LSCA L+ +G+ ++ ++E
Sbjct: 178 GK------RIAVIGGGPAGLSCAHRLASLGH-EVDVFE 208
>gi|399519086|ref|ZP_10759894.1| Glutamate synthase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112910|emb|CCH36452.1| Glutamate synthase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 455
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ L + F D+ L+ R A E++RCL C DAPC +CP++IDI SFI +ISH+N G
Sbjct: 15 AAELADRFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIRNISHENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C +E P+ IG LQ++A + + S+
Sbjct: 74 AAEKILSANILGGSCARVCPTEILCQQACVRNNTQECAPVLIGLLQRYAID---NAQFSE 130
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ ++ I+E
Sbjct: 131 --HPFQRAPASGKRIAVVGAGPAGLSCAHRLAMHGH-EVVIFE 170
>gi|409418682|ref|ZP_11258658.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. HYS]
Length = 455
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N G
Sbjct: 15 NATLAEHFSDLA-PPLTARQAALEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C +E P+ IG LQ++A + D
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNHQECAPVLIGLLQRYAVD-HADFA--- 129
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P + +IA++G GPA LSCA L+ G+ D+ I+E
Sbjct: 130 -QHPFQRAASTGKRIAVVGAGPAGLSCAHRLAWHGH-DVVIFE 170
>gi|338980150|ref|ZP_08631456.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acidiphilium sp. PM]
gi|338208926|gb|EGO96739.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acidiphilium sp. PM]
Length = 416
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
+S A EASRC C DAPC +CPT IDI FI I+ N GAA+ I S N LG +C
Sbjct: 1 MSHDKAQIEASRCYFCYDAPCVAACPTGIDIPGFIRGIATNNLDGAAERILSANILGGSC 60
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
VCPT LC G C A + P+ IG LQ+ AT+ + P A+ ++A
Sbjct: 61 ARVCPTEILCEGACVRTAQQAKPVEIGALQRVATDHAMAKVAAGAPHPFARAAATGRRVA 120
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+IG GPA L+CA L+ +G+ ++ I+E +
Sbjct: 121 IIGAGPAGLACAHRLAMLGH-EVVIFEARS 149
>gi|424943141|ref|ZP_18358904.1| probable oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|346059587|dbj|GAA19470.1| probable oxidoreductase [Pseudomonas aeruginosa NCMG1179]
Length = 455
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFDE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E T
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEART 173
>gi|260434050|ref|ZP_05788021.1| glutamate synthase subunit beta [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417878|gb|EEX11137.1| glutamate synthase subunit beta [Silicibacter lacuscaerulensis
ITI-1157]
Length = 444
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S L +NF D+ H L+ A A RC C DAPC +CPT IDI FI I
Sbjct: 15 LSSDELTSNFTDL-HPPLAPHEAAVAADRCYFCYDAPCVTACPTDIDIPLFIRQIQAGQP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK IF N LG C VCPT LC C AE P+ IG LQ++AT+ G+
Sbjct: 74 ESAAKTIFDQNILGGMCARVCPTETLCEEACVRETAEGKPVEIGRLQRYATDTLMQAGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +A+IG GPA L+CA L+ +G+ D+ I+E
Sbjct: 134 ----PFTRAAPTGKTVAVIGAGPAGLACAHRLAMLGH-DVVIFE 172
>gi|426409830|ref|YP_007029929.1| glutamate synthase [Pseudomonas sp. UW4]
gi|426268047|gb|AFY20124.1| glutamate synthase [Pseudomonas sp. UW4]
Length = 455
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 12 VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKN 71
V + +L +F D+ L+ER A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 12 VENAAALAGHFTDLA-PPLNERQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIQQDN 70
Query: 72 YYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMG 130
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + +
Sbjct: 71 VQGAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVMIGLLQRYAVD---NAH 127
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
S P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FST--HPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|15595637|ref|NP_249131.1| oxidoreductase [Pseudomonas aeruginosa PAO1]
gi|218889182|ref|YP_002438046.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
gi|418588433|ref|ZP_13152445.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592957|ref|ZP_13156816.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
MPAO1/P2]
gi|421515057|ref|ZP_15961743.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
PAO579]
gi|9946298|gb|AAG03829.1|AE004481_5 probable oxidoreductase [Pseudomonas aeruginosa PAO1]
gi|218769405|emb|CAW25165.1| probable oxidoreductase [Pseudomonas aeruginosa LESB58]
gi|375040829|gb|EHS33561.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
MPAO1/P1]
gi|375048210|gb|EHS40738.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
MPAO1/P2]
gi|404348785|gb|EJZ75122.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
PAO579]
Length = 455
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFDE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E T
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEART 173
>gi|398865747|ref|ZP_10621259.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM78]
gi|398242490|gb|EJN28102.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM78]
Length = 470
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 93/163 (57%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I N G
Sbjct: 30 AAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVQG 88
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + + SQ
Sbjct: 89 AAQRILSANILGGSCARVCPTEILCQQACVRNNAHECAPVLIGLLQRYAVD---NAHFSQ 145
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P A +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 146 HPFPRAAA--TGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 185
>gi|398950585|ref|ZP_10673750.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM33]
gi|398157727|gb|EJM46101.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM33]
Length = 455
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 12 VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKN 71
V + +L +F D+ L+ER A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 12 VENAAALAGHFTDLA-PPLNERQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIQQDN 70
Query: 72 YYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMG 130
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + +
Sbjct: 71 VQGAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVMIGLLQRYAVD---NAH 127
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
S P A +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FSTHPFPRAAA--TGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|398929267|ref|ZP_10663874.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM48]
gi|398167305|gb|EJM55374.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM48]
Length = 470
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L+ER A EASRCL C DAPC +CP++IDI SFI +I N G
Sbjct: 30 AAALAGHFTDLA-PPLNERQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIQQDNVQG 88
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + + S
Sbjct: 89 AAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVMIGLLQRYAVD---NAHFST 145
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 146 --HPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 185
>gi|395761012|ref|ZP_10441681.1| dihydropyrimidine dehydrogenase subunit A [Janthinobacterium
lividum PAMC 25724]
Length = 455
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L +F D+ L+ R A E++RCL C DAPC + CP++ID+ SFI +I KN GAA
Sbjct: 17 ALAGHFTDLA-PPLTARQAAIESARCLYCYDAPCSRICPSEIDVASFIRNIHEKNINGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGC-NLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
I N LG +C VCPT LC C + AE P+ IG LQ++A + + R
Sbjct: 76 AGILKQNILGGSCARVCPTEILCEDVCVRNHDAEAQPVKIGLLQRYAVD-----HMHFAR 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK 177
P + IA++G GPA LSCA L+ +G+ + I+EK
Sbjct: 131 HPFQRAAATGKTIAIVGAGPAGLSCAHRLAMLGH-AVVIFEK 171
>gi|398830920|ref|ZP_10589101.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Phyllobacterium sp. YR531]
gi|398213500|gb|EJN00094.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Phyllobacterium sp. YR531]
Length = 485
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
F D+ H LS A E+ RC C DAPC +CPT IDI FI I+ N G+AK I +
Sbjct: 25 FSDL-HPPLSRHEAFVESDRCYFCYDAPCMNACPTGIDIPLFIREIAADNPTGSAKTILA 83
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AAE P+ IG LQ++AT+ + G + P +
Sbjct: 84 ENILGGMCARVCPTETLCEQACVREAAEGKPVKIGLLQRYATDHLMENG----QHPFKRA 139
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+A++G GPA LS A L+ G+ D+TI+E
Sbjct: 140 APTGKSVAVVGAGPAGLSAAHRLAMHGH-DVTIFE 173
>gi|407973729|ref|ZP_11154640.1| dihydropyrimidine dehydrogenase subunit A [Nitratireductor indicus
C115]
gi|407430789|gb|EKF43462.1| dihydropyrimidine dehydrogenase subunit A [Nitratireductor indicus
C115]
Length = 450
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L AL EA RC C DAPC +CPT IDI FI I+ N G+A+ I
Sbjct: 22 RNFADL-HPPLDAHEALVEADRCYFCYDAPCATACPTSIDIPMFIRQIATGNPLGSARTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F N LG C VCPT LC C AE P+ IG LQ++AT D+ ++ R
Sbjct: 81 FDQNILGGMCARVCPTETLCEEACVREEAEGKPVQIGRLQRYAT----DVAMAADRQFYE 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A++G GPA L+CA L+ G+ +T+ E
Sbjct: 137 RAASSGRKVAVVGAGPAGLACAHRLAMHGH-AVTVLE 172
>gi|167748209|ref|ZP_02420336.1| hypothetical protein ANACAC_02953 [Anaerostipes caccae DSM 14662]
gi|317472265|ref|ZP_07931593.1| pyridine nucleotide-disulfide oxidoreductase [Anaerostipes sp.
3_2_56FAA]
gi|167652201|gb|EDR96330.1| pyridine nucleotide-disulfide oxidoreductase [Anaerostipes caccae
DSM 14662]
gi|316900222|gb|EFV22208.1| pyridine nucleotide-disulfide oxidoreductase [Anaerostipes sp.
3_2_56FAA]
Length = 402
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EASRCL C D+PC K CP D FI S+ +N GAA+ + +NPL C V
Sbjct: 20 RTAMEEASRCLLCHDSPCSKGCPAGTDPGKFIRSLRFRNIKGAAETVRENNPLAGCCAQV 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP +C C+ ++ PI IG +Q+F E K+ G+ ++ + K + KIA +G
Sbjct: 80 CPYGKMCEQACSRTGIDK-PIEIGKIQRFLVEEEKNQGMEFLKAAEPKKE----KIACVG 134
Query: 153 CGPASLSCATFLSRMGYDDITIYE 176
GPASLSCA L+ GY +T+YE
Sbjct: 135 AGPASLSCARQLALEGY-SVTVYE 157
>gi|237746521|ref|ZP_04577001.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377872|gb|EEO27963.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 402
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 10/147 (6%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A+ EASRCL C DAPC +CP D FI S+ N GAA+ I +NP G +C +
Sbjct: 20 RSAMAEASRCLLCHDAPCSNACPAGTDPARFIRSLRFDNIRGAAETIRENNPFGASCSRI 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP--PDAKVDFPDTKIAL 150
CP ++LC G C L + + P+ I LQ+F T+ + + ++P P+ K +IA
Sbjct: 80 CPANELCEGAC-LRSRLDRPVEIARLQRFITDEERRHNLHFLKPGTPNGK------RIAC 132
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEK 177
IG GPASLSCA L++ G +T++EK
Sbjct: 133 IGAGPASLSCAARLAQEGC-RVTVFEK 158
>gi|399001147|ref|ZP_10703865.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM18]
gi|398128340|gb|EJM17731.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM18]
Length = 455
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L+ER A EASRCL C DAPC +CP+ IDI SFI +I +N G
Sbjct: 15 AAALAGHFTDLA-PPLNERQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + + S+
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCEQACVRNNAQECAPVLIGLLQRYAVD---NAHFSE 130
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 131 --HPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|398870172|ref|ZP_10625521.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM74]
gi|398209359|gb|EJM96035.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM74]
Length = 455
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 12 VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKN 71
+ + +L +F D+ L+ER A EASRCL C DAPC +CP++IDI SFI +I+ N
Sbjct: 12 IENAAALAGHFTDLA-PPLNERQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIAQDN 70
Query: 72 YYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMG 130
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + +
Sbjct: 71 VQGAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVMIGLLQRYAVD---NAH 127
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
S P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FSA--HPFQREAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|407776313|ref|ZP_11123586.1| dihydropyrimidine dehydrogenase subunit A [Nitratireductor
pacificus pht-3B]
gi|407301604|gb|EKF20723.1| dihydropyrimidine dehydrogenase subunit A [Nitratireductor
pacificus pht-3B]
Length = 450
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L A EA RC C DAPC +CPT IDI FI I+ N G+AK I
Sbjct: 22 KNFADL-HPPLDGHEARVEADRCYFCYDAPCMTACPTSIDIPMFIRQIATGNALGSAKTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F N LG C VCPT LC C AE P+ IG LQ+FAT D + R
Sbjct: 81 FDQNILGGMCARVCPTETLCEEACVREEAEGKPVQIGRLQRFAT----DAAMQAQRQFYQ 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ +A++G GPA L+CA L+ G+ +TIYE
Sbjct: 137 RGAASGKTVAIVGAGPAGLACAHRLAMHGH-AVTIYE 172
>gi|398922545|ref|ZP_10660337.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM49]
gi|398162628|gb|EJM50816.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM49]
Length = 455
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L+ER A EASRCL C DAPC +CP++IDI SFI +I N G
Sbjct: 15 ATALAGHFTDLA-PPLNERQARLEASRCLYCYDAPCVNACPSEIDIPSFIRNIQQDNVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + + S
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVMIGLLQRYAVD---NAHFST 130
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 131 --HPFQRAATTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|395645678|ref|ZP_10433538.1| glutamate synthase (NADPH), homotetrameric [Methanofollis
liminatans DSM 4140]
gi|395442418|gb|EJG07175.1| glutamate synthase (NADPH), homotetrameric [Methanofollis
liminatans DSM 4140]
Length = 447
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V +F+++ + LS A+ EA RC++C C K CP IDI +FI I+++++ GAA
Sbjct: 10 VRDFNEV-NKGLSAENAVLEALRCMECVRPTCVKGCPVGIDIPAFIQQIANQDFEGAAAT 68
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS--QIRP 136
I DN L CG VCP C G C L A +E P+ IG L++F + ++ G++ ++ P
Sbjct: 69 IKRDNMLPAICGRVCPQESQCEGSCVL-AKKEKPVAIGALERFVADYEREHGMTLPEVAP 127
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P K ++A++G GPA L+ A L+R+G+ +T++E
Sbjct: 128 PSGK------RVAVVGSGPAGLTAAAELARLGH-AVTVFE 160
>gi|330820855|ref|YP_004349717.1| NADPH-dependent glutamate synthase beta chain [Burkholderia
gladioli BSR3]
gi|327372850|gb|AEA64205.1| NADPH-dependent glutamate synthase beta chain [Burkholderia
gladioli BSR3]
Length = 445
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPT IDI SFI I H N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTGIDIPSFIRKIGHGNLKGAAVDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ + G R PDT ++A++G GPA
Sbjct: 100 EGACVRNHQDSQPVAIGALQRHATDWAMETGAVTFRRA------PDTGRQVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYEKN 178
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFDAR 173
>gi|86137295|ref|ZP_01055872.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseobacter sp. MED193]
gi|85825630|gb|EAQ45828.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseobacter sp. MED193]
Length = 444
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ + +NF D+ H A A RC C DAPC +CPT IDI FI I +
Sbjct: 15 LAAADIADNFGDL-HPAYDAHEAAVAADRCYFCYDAPCMTACPTSIDIPQFIREIQAGHP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK I N LG C VCPT LC C AAE P+ IG LQ+FAT+ + +
Sbjct: 74 SSAAKTILDQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRFATDTLMEKDVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P ++ K+A++G GPA LS A L+ +G+ D+ +Y+ +
Sbjct: 134 ----PYSRAASTGKKVAVVGAGPAGLSAAHRLAMLGH-DVVVYDAKS 175
>gi|126727111|ref|ZP_01742948.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Rhodobacterales bacterium HTCC2150]
gi|126703539|gb|EBA02635.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Rhodobacterales bacterium HTCC2150]
Length = 444
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N L NNF D+ H L A RC C DAPC +CPT IDI FI IS
Sbjct: 12 NRLGQDELANNFADL-HMPLQPHEVKVAADRCYFCHDAPCVTACPTDIDIPLFIRQISTG 70
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
AAK IF N LG C VCPT +LC C AE P+ IG LQ+ AT+
Sbjct: 71 TPEAAAKTIFDMNILGGMCARVCPTEELCEQVCVREVAEGKPVEIGRLQRHATDTL---- 126
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
++Q P + KIA++G GPA LSC L+ +G +++ IY+ N
Sbjct: 127 MAQDAHPYKRAASTGKKIAIVGAGPAGLSCGHRLAMLG-NEVMIYDAN 173
>gi|398858895|ref|ZP_10614579.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM79]
gi|398237996|gb|EJN23733.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM79]
Length = 487
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP+ IDI SFI +I +N G
Sbjct: 47 AATLAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQENVQG 105
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + F +
Sbjct: 106 AAQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVDNAHFSEHPF 165
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 166 QRAAP-------TGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 202
>gi|398902415|ref|ZP_10651006.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM50]
gi|398178543|gb|EJM66189.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM50]
Length = 483
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP+ IDI SFI +I +N G
Sbjct: 43 AAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQENVQG 101
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + F +
Sbjct: 102 AAQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVDNAHFSEHPF 161
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 162 QRAAP-------TGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 198
>gi|186476293|ref|YP_001857763.1| putative oxidoreductase [Burkholderia phymatum STM815]
gi|184192752|gb|ACC70717.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia phymatum STM815]
Length = 449
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCSRVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATE-VFKDMGISQIRPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ + R PD+ +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMAHDAVQWQRAPDSG-----RHVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+ G+ +TIY+
Sbjct: 155 ACAHRLAVAGH-RVTIYD 171
>gi|390571471|ref|ZP_10251712.1| dihydropyrimidine dehydrogenase subunit A [Burkholderia terrae
BS001]
gi|420251733|ref|ZP_14754894.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Burkholderia sp. BT03]
gi|389936574|gb|EIM98461.1| dihydropyrimidine dehydrogenase subunit A [Burkholderia terrae
BS001]
gi|398057256|gb|EJL49228.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Burkholderia sp. BT03]
Length = 449
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCSRVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATE-VFKDMGISQIRPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ + R PD+ +A++G GPA L
Sbjct: 100 EGACVRNHQDAKPVAIGALQRHATDWAMARDAVKFTRAPDSG-----RHVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYEKN 178
+CA L+ G+ +TIY+ +
Sbjct: 155 ACAHRLAVAGH-RVTIYDAH 173
>gi|114766789|ref|ZP_01445723.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Pelagibaca bermudensis HTCC2601]
gi|114540983|gb|EAU44041.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseovarius sp. HTCC2601]
Length = 426
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+ H L + AL A RC C DAPCQ +CPT+IDI FI I+ AA+ I
Sbjct: 9 GFGDL-HPALDDHEALVAADRCYFCHDAPCQTACPTEIDIPLFIRQIATGTPEAAARTIL 67
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N LG C VCPT LC C AE P+ IG LQ++AT+ ++Q P +
Sbjct: 68 SQNILGGMCARVCPTETLCEEVCVREVAEGKPVEIGRLQRYATDTL----MAQNVHPFER 123
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYD 170
++A++G GPA L+CA L+ MG+D
Sbjct: 124 DAATGKRVAVVGAGPAGLACAHRLAMMGHD 153
>gi|423720339|ref|ZP_17694521.1| dihydropyrimidine dehydrogenase (NADP(+)) [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366676|gb|EID43963.1| dihydropyrimidine dehydrogenase (NADP(+)) [Geobacillus
thermoglucosidans TNO-09.020]
Length = 402
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EASRCL C DAPC K CP D FI SI +N GAA+ I +N LG +C ++
Sbjct: 20 RRAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSIRFRNINGAAETIRKNNILGASCALI 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP LC C+ + PI IG LQQFA E + + + D + ++A IG
Sbjct: 80 CPYERLCEQACSRCGIDR-PIQIGKLQQFAMEHERKCNKTYLIKEDT---YTGKRVACIG 135
Query: 153 CGPASLSCATFLSRMGYDDITIYEKN 178
GPASLSCA L++ G ++TI++++
Sbjct: 136 AGPASLSCAAELAKKGV-EVTIFDEH 160
>gi|126731571|ref|ZP_01747377.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Sagittula stellata E-37]
gi|126708107|gb|EBA07167.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Sagittula stellata E-37]
Length = 442
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
SL NF D+ H A A RC C DAPC +CPT IDI FI IS AA
Sbjct: 18 SLAGNFADL-HPAYDAHEAAVAADRCYFCHDAPCVTACPTDIDIPLFIRQISTGQPEAAA 76
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ IF N LG C VCPT LC C AAE P+ IG LQ+ AT+ ++
Sbjct: 77 RTIFEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRHATDSL----MAANSH 132
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + ++A+IG GPA LSCA L+ G+ D+T+YE
Sbjct: 133 PFTRAAPTGKRVAVIGAGPAGLSCAHRLALKGH-DVTVYE 171
>gi|386056509|ref|YP_005973031.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|347302815|gb|AEO72929.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFGE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEARA 173
>gi|336235799|ref|YP_004588415.1| dihydropyrimidine dehydrogenase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362654|gb|AEH48334.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Geobacillus
thermoglucosidasius C56-YS93]
Length = 402
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EASRCL C DAPC K CP D FI SI +N GAA+ I +N LG +C ++
Sbjct: 20 RRAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSIRFRNINGAAETIRKNNILGASCALI 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP LC C+ + PI IG LQQFA E + + + D + ++A IG
Sbjct: 80 CPYERLCEQACSRCGIDR-PIQIGKLQQFAMEHERKCNKTYLIKEDT---YTGKRVACIG 135
Query: 153 CGPASLSCATFLSRMGYDDITIYEKN 178
GPASLSCA L++ G ++TI++++
Sbjct: 136 AGPASLSCAAELAKKGV-EVTIFDEH 160
>gi|312111354|ref|YP_003989670.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus sp. Y4.1MC1]
gi|311216455|gb|ADP75059.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacillus sp. Y4.1MC1]
Length = 402
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Query: 33 RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
R A++EASRCL C DAPC K CP D FI SI +N GAA+ I +N LG +C ++
Sbjct: 20 RRAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSIRFRNINGAAETIRKNNILGASCALI 79
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
CP LC C+ + PI IG LQQFA E + + + D + ++A IG
Sbjct: 80 CPYERLCEQACSRCGIDR-PIQIGKLQQFAMEHERKCNKTYLIKEDT---YTGKRVACIG 135
Query: 153 CGPASLSCATFLSRMGYDDITIYEKN 178
GPASLSCA L++ G ++TI++++
Sbjct: 136 AGPASLSCAAELAKKGV-EVTIFDEH 160
>gi|384920878|ref|ZP_10020875.1| putative oxidoreductase [Citreicella sp. 357]
gi|384465217|gb|EIE49765.1| putative oxidoreductase [Citreicella sp. 357]
Length = 444
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+ H L + AL A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 23 GFSDL-HPALDDHEALVAADRCYFCHDAPCATACPTDIDIPLFIRQIATGTPDAAARTIL 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N LG C VCPT LC C AE P+ IG LQ++AT+ ++Q P +
Sbjct: 82 SQNILGGMCARVCPTETLCEEVCVRETAEGKPVEIGRLQRYATDTV----MAQYVHPFER 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK 177
++A++G GPA LSCA L+ MG+D + E+
Sbjct: 138 DALTGKRVAVVGAGPAGLSCAHRLAMMGHDVVIFDER 174
>gi|116054171|ref|YP_788614.1| oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172161|ref|ZP_15629941.1| putative oxidoreductase [Pseudomonas aeruginosa CI27]
gi|115589392|gb|ABJ15407.1| putative glutamate synthase beta subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404538388|gb|EKA47931.1| putative oxidoreductase [Pseudomonas aeruginosa CI27]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFGE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEARA 173
>gi|416856289|ref|ZP_11911933.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
138244]
gi|334842164|gb|EGM20777.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
138244]
gi|453045820|gb|EME93538.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
PA21_ST175]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFGE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEARA 173
>gi|421178350|ref|ZP_15635965.1| putative oxidoreductase [Pseudomonas aeruginosa E2]
gi|404548680|gb|EKA57627.1| putative oxidoreductase [Pseudomonas aeruginosa E2]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFDE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEARA 173
>gi|421151507|ref|ZP_15611120.1| putative oxidoreductase [Pseudomonas aeruginosa ATCC 14886]
gi|404527263|gb|EKA37432.1| putative oxidoreductase [Pseudomonas aeruginosa ATCC 14886]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFGE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEARA 173
>gi|107099426|ref|ZP_01363344.1| hypothetical protein PaerPA_01000438 [Pseudomonas aeruginosa PACS2]
gi|254237328|ref|ZP_04930651.1| hypothetical protein PACG_03399 [Pseudomonas aeruginosa C3719]
gi|254243538|ref|ZP_04936860.1| hypothetical protein PA2G_04356 [Pseudomonas aeruginosa 2192]
gi|296386939|ref|ZP_06876438.1| putative oxidoreductase [Pseudomonas aeruginosa PAb1]
gi|313111934|ref|ZP_07797723.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|355646771|ref|ZP_09054606.1| hypothetical protein HMPREF1030_03692 [Pseudomonas sp. 2_1_26]
gi|386068649|ref|YP_005983953.1| putative oxidoreductase [Pseudomonas aeruginosa NCGM2.S1]
gi|392981852|ref|YP_006480439.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
DK2]
gi|416874964|ref|ZP_11918457.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
152504]
gi|419755922|ref|ZP_14282274.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137022|ref|ZP_14645025.1| putative oxidoreductase [Pseudomonas aeruginosa CIG1]
gi|421157455|ref|ZP_15616828.1| putative oxidoreductase [Pseudomonas aeruginosa ATCC 25324]
gi|421165307|ref|ZP_15623643.1| putative oxidoreductase [Pseudomonas aeruginosa ATCC 700888]
gi|451988175|ref|ZP_21936314.1| Pyridine nucleotide-disulphide oxidoreductase associated with
reductive pyrimidine catabolism [Pseudomonas aeruginosa
18A]
gi|126169259|gb|EAZ54770.1| hypothetical protein PACG_03399 [Pseudomonas aeruginosa C3719]
gi|126196916|gb|EAZ60979.1| hypothetical protein PA2G_04356 [Pseudomonas aeruginosa 2192]
gi|310884225|gb|EFQ42819.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|334842517|gb|EGM21123.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
152504]
gi|348037208|dbj|BAK92568.1| putative oxidoreductase [Pseudomonas aeruginosa NCGM2.S1]
gi|354828310|gb|EHF12433.1| hypothetical protein HMPREF1030_03692 [Pseudomonas sp. 2_1_26]
gi|384397584|gb|EIE43995.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317357|gb|AFM62737.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
DK2]
gi|403250222|gb|EJY63675.1| putative oxidoreductase [Pseudomonas aeruginosa CIG1]
gi|404542280|gb|EKA51606.1| putative oxidoreductase [Pseudomonas aeruginosa ATCC 700888]
gi|404550607|gb|EKA59340.1| putative oxidoreductase [Pseudomonas aeruginosa ATCC 25324]
gi|451754151|emb|CCQ88837.1| Pyridine nucleotide-disulphide oxidoreductase associated with
reductive pyrimidine catabolism [Pseudomonas aeruginosa
18A]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT+IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQAALESARCLYCYDAPCVNACPTEIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G +
Sbjct: 76 QKILSANILGGSCARVCPTEILCQRACVRNNAQECAPVLIGQLQRYA---LDHAGFGE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVLFEARA 173
>gi|188588282|ref|YP_001921442.1| oxidoreductase YeiT [Clostridium botulinum E3 str. Alaska E43]
gi|188498563|gb|ACD51699.1| hypothetical oxidoreductase YeiT [Clostridium botulinum E3 str.
Alaska E43]
Length = 423
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++E+SRCL C DAPC ++CP + FI S+ +N GA + I +N LG C VCP
Sbjct: 20 AIEESSRCLLCHDAPCSQACPIGTNPAKFIRSLRFRNLKGAVETIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI I LQQ+ T+ K +G+ + KV+ K+A+IG G
Sbjct: 80 TKKYCEGACSRTNIDK-PIEIAKLQQYLTDYEKVLGLEILN----KVEIDKEKVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
P+ L+ AT L+++GY ++T++EK
Sbjct: 135 PSGLAAATKLAQLGY-NVTVFEK 156
>gi|251781084|ref|ZP_04824004.1| hypothetical oxidoreductase YeiT [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243085399|gb|EES51289.1| hypothetical oxidoreductase YeiT [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 423
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++E+SRCL C DAPC ++CP + FI S+ +N GA + I +N LG C VCP
Sbjct: 20 AIEESSRCLLCHDAPCSQACPIGTNPAKFIRSLRFRNLKGAVETIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI I LQQ+ T+ K +G+ + KV+ K+A+IG G
Sbjct: 80 TKKYCEGACSRTNIDK-PIEIAKLQQYLTDYEKVLGLEILN----KVEIDKEKVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
P+ L+ AT L+++GY ++T++EK
Sbjct: 135 PSGLAAATKLAQLGY-NVTVFEK 156
>gi|410632620|ref|ZP_11343275.1| glutamate synthase (NADPH/NADH) small chain [Glaciecola arctica
BSs20135]
gi|410147857|dbj|GAC20142.1| glutamate synthase (NADPH/NADH) small chain [Glaciecola arctica
BSs20135]
Length = 444
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
F D+ H ++ AL EASRC C DAPC K+CPT IDI +FI I +N GAAK I
Sbjct: 14 EGFADL-HKPYNKSQALLEASRCTYCYDAPCIKACPTGIDIPTFIHQIRTQNVKGAAKTI 72
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S+N +G TC CPT LC C + + P+ IG LQ++A + + S P
Sbjct: 73 LSENIMGGTCARACPTEILCERACVRHHDQGKPVEIGLLQRYAVDYLME---STDEHPFV 129
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ IA++G GPA LSCA + +G+ +T++E
Sbjct: 130 RAPETGKTIAVVGAGPAGLSCAHRAALLGH-KVTVFE 165
>gi|254459767|ref|ZP_05073183.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Rhodobacterales bacterium HTCC2083]
gi|206676356|gb|EDZ40843.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Rhodobacteraceae bacterium HTCC2083]
Length = 443
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 86/156 (55%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ AAK I
Sbjct: 23 NFADL-HAPLDDHEALVAADRCYFCHDAPCMTACPTDIDIPLFIRQIATGTSDAAAKTIL 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ N LG C VCPT LC C AE P+ IG LQ++AT+ G+ P +
Sbjct: 82 TQNILGGMCARVCPTETLCEEVCVREVAEGKPVLIGQLQRYATDGLMAKGVH----PFVR 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA L+CA L+ +G+ D+T+++
Sbjct: 138 AETTGKRVAVVGAGPAGLACAHRLAMLGH-DVTLHD 172
>gi|62289277|ref|YP_221070.1| oxidoreductase [Brucella abortus bv. 1 str. 9-941]
gi|82699208|ref|YP_413782.1| putative oxidoreductase [Brucella melitensis biovar Abortus 2308]
gi|237814769|ref|ZP_04593767.1| oxidoreductase [Brucella abortus str. 2308 A]
gi|62195409|gb|AAX73709.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella abortus bv. 1 str. 9-941]
gi|82615309|emb|CAJ10270.1| Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding
site:Adrenodoxin reductase:Pyridine
nucleotide-disulphide [Brucella melitensis biovar
Abortus 2308]
gi|237789606|gb|EEP63816.1| oxidoreductase [Brucella abortus str. 2308 A]
Length = 496
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 36 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 94
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 95 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 150
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 151 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 184
>gi|23501190|ref|NP_697317.1| oxidoreductase [Brucella suis 1330]
gi|376279979|ref|YP_005153985.1| putative oxidoreductase [Brucella suis VBI22]
gi|384223973|ref|YP_005615137.1| putative oxidoreductase [Brucella suis 1330]
gi|23347068|gb|AAN29232.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella suis 1330]
gi|343382153|gb|AEM17645.1| putative oxidoreductase [Brucella suis 1330]
gi|358257578|gb|AEU05313.1| putative oxidoreductase [Brucella suis VBI22]
Length = 501
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 36 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 94
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 95 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 150
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 151 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 184
>gi|189023531|ref|YP_001934299.1| oxidoreductase [Brucella abortus S19]
gi|260545966|ref|ZP_05821707.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
NCTC 8038]
gi|260754067|ref|ZP_05866415.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 6 str. 870]
gi|260757289|ref|ZP_05869637.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 4 str. 292]
gi|260761111|ref|ZP_05873454.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 2 str. 86/8/59]
gi|260883094|ref|ZP_05894708.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 9 str. C68]
gi|261213314|ref|ZP_05927595.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 3 str. Tulya]
gi|297247694|ref|ZP_06931412.1| glutamate synthase subunit (NADPH/NADH) small [Brucella abortus bv.
5 str. B3196]
gi|376273964|ref|YP_005152542.1| oxidoreductase [Brucella abortus A13334]
gi|423167546|ref|ZP_17154249.1| hypothetical protein M17_01236 [Brucella abortus bv. 1 str. NI435a]
gi|423170078|ref|ZP_17156753.1| hypothetical protein M19_00611 [Brucella abortus bv. 1 str. NI474]
gi|423173842|ref|ZP_17160513.1| hypothetical protein M1A_01240 [Brucella abortus bv. 1 str. NI486]
gi|423176873|ref|ZP_17163519.1| hypothetical protein M1E_01115 [Brucella abortus bv. 1 str. NI488]
gi|423179511|ref|ZP_17166152.1| hypothetical protein M1G_00611 [Brucella abortus bv. 1 str. NI010]
gi|423182641|ref|ZP_17169278.1| hypothetical protein M1I_00610 [Brucella abortus bv. 1 str. NI016]
gi|423186416|ref|ZP_17173030.1| hypothetical protein M1K_01234 [Brucella abortus bv. 1 str. NI021]
gi|423191146|ref|ZP_17177754.1| hypothetical protein M1M_02826 [Brucella abortus bv. 1 str. NI259]
gi|189019103|gb|ACD71825.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella abortus S19]
gi|260097373|gb|EEW81248.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
NCTC 8038]
gi|260667607|gb|EEX54547.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 4 str. 292]
gi|260671543|gb|EEX58364.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 2 str. 86/8/59]
gi|260674175|gb|EEX60996.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 6 str. 870]
gi|260872622|gb|EEX79691.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 9 str. C68]
gi|260914921|gb|EEX81782.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 3 str. Tulya]
gi|297174863|gb|EFH34210.1| glutamate synthase subunit (NADPH/NADH) small [Brucella abortus bv.
5 str. B3196]
gi|363401570|gb|AEW18540.1| oxidoreductase [Brucella abortus A13334]
gi|374540980|gb|EHR12479.1| hypothetical protein M17_01236 [Brucella abortus bv. 1 str. NI435a]
gi|374541588|gb|EHR13083.1| hypothetical protein M1A_01240 [Brucella abortus bv. 1 str. NI486]
gi|374542314|gb|EHR13803.1| hypothetical protein M19_00611 [Brucella abortus bv. 1 str. NI474]
gi|374551030|gb|EHR22465.1| hypothetical protein M1G_00611 [Brucella abortus bv. 1 str. NI010]
gi|374551487|gb|EHR22921.1| hypothetical protein M1I_00610 [Brucella abortus bv. 1 str. NI016]
gi|374552623|gb|EHR24046.1| hypothetical protein M1E_01115 [Brucella abortus bv. 1 str. NI488]
gi|374553836|gb|EHR25250.1| hypothetical protein M1M_02826 [Brucella abortus bv. 1 str. NI259]
gi|374558095|gb|EHR29489.1| hypothetical protein M1K_01234 [Brucella abortus bv. 1 str. NI021]
Length = 493
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|159043911|ref|YP_001532705.1| putative oxidoreductase [Dinoroseobacter shibae DFL 12]
gi|157911671|gb|ABV93104.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Dinoroseobacter shibae DFL 12]
Length = 445
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ L NF D+ H AL A RC C DAPC +CPT IDI FI I+
Sbjct: 15 LSETELETNFSDL-HAPYDAHEALVAADRCYFCHDAPCITACPTAIDIPLFIRQIATGTP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK IF N LG C VCPT LC C AE P+ IG LQ++AT+ G+
Sbjct: 74 EAAAKTIFDQNILGGMCARVCPTETLCEQACVREVAEGKPVEIGRLQRYATDTVMAAGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGY 169
P A+ KIA++G GPA L+CA L+ G+
Sbjct: 134 ----PYARAPETGKKIAVVGAGPAGLACAHRLAMKGH 166
>gi|398852177|ref|ZP_10608845.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM80]
gi|398244825|gb|EJN30360.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM80]
Length = 455
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 14 SAAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVP 72
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + +
Sbjct: 73 GAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVLIGLLQRYAVD-----NAN 127
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FTEHPFQRAAASGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|307729119|ref|YP_003906343.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. CCGE1003]
gi|307583654|gb|ADN57052.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. CCGE1003]
Length = 449
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L F DI L GA A+RC C DAPC +CPTQIDI FI I + N GAA
Sbjct: 19 LACEFSDIA-PLLDASGAAAAANRCHYCYDAPCVNACPTQIDIPGFIRKIGNGNLKGAAL 77
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I S NPLG C VCPT LC G C + P+ IG LQ+ AT D +++
Sbjct: 78 DILSANPLGGMCARVCPTEILCEGACVRNHQDAKPVAIGALQRHAT----DWAMARGEAL 133
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA LSCA L+ G+ D+TIY+
Sbjct: 134 FTRAPATGRRVAVLGAGPAGLSCAHRLALFGH-DVTIYD 171
>gi|225626810|ref|ZP_03784849.1| oxidoreductase [Brucella ceti str. Cudo]
gi|256368744|ref|YP_003106250.1| putative oxidoreductase [Brucella microti CCM 4915]
gi|340789929|ref|YP_004755393.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Brucella pinnipedialis B2/94]
gi|225618467|gb|EEH15510.1| oxidoreductase [Brucella ceti str. Cudo]
gi|255998902|gb|ACU47301.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella microti CCM 4915]
gi|340558387|gb|AEK53625.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Brucella pinnipedialis B2/94]
Length = 501
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 36 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 94
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 95 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 150
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 151 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 184
>gi|170721019|ref|YP_001748707.1| putative oxidoreductase [Pseudomonas putida W619]
gi|169759022|gb|ACA72338.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pseudomonas putida W619]
Length = 455
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 QLAEQFSDLA-PPLTARQAAVESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + G ++
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYA---LDNAGFTE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITI-----------YEKNTYDMVT 184
P + +IA++G GPA LSCA L+ G++ + Y Y +V
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGHEVVVFEACDKAGGLNEYGIARYKLVD 190
Query: 185 NVSPRIVK------GTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
+ + R V+ G RH G G LN+ + ++ Y V+
Sbjct: 191 DYAQREVEFLLGIGGIEMRH--GQRLGDNLNLTELRDQ--YDAVF 231
>gi|261754290|ref|ZP_05997999.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 3 str. 686]
gi|261744043|gb|EEY31969.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 3 str. 686]
Length = 498
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|395794581|ref|ZP_10473902.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. Ag1]
gi|421137878|ref|ZP_15597954.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas
fluorescens BBc6R8]
gi|395341246|gb|EJF73066.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. Ag1]
gi|404510937|gb|EKA24831.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudomonas
fluorescens BBc6R8]
Length = 455
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N G
Sbjct: 15 AAALAAHFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA+ I S N LG +C VCPT LC C AEE P+ IG LQ++A + F +
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAVDNAHFSEHPF 133
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 134 QRAAP-------TGKRIAVVGAGPAGLSCAHRSALHGH-DVVIFE 170
>gi|408481142|ref|ZP_11187361.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. R81]
Length = 455
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L ++F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N GA
Sbjct: 16 ATLASHFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTENVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
A+ I S N LG +C VCPT LC C AEE P+ IG LQ++A +
Sbjct: 75 AQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAVD-----NAHFT 129
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA L+CA S G+ D+ I+E
Sbjct: 130 EHPFHRAASTGKRIAVVGAGPAGLACAHRSSLHGH-DVVIFE 170
>gi|395494993|ref|ZP_10426572.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. PAMC
25886]
Length = 455
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N G
Sbjct: 15 AAALAAHFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA+ I S N LG +C VCPT LC C AEE P+ IG LQ++A + F +
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAVDNAHFSEHPF 133
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 134 QRAAP-------TGKRIAVVGAGPAGLSCAHRSALHGH-DVVIFE 170
>gi|261751636|ref|ZP_05995345.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 5 str. 513]
gi|261741389|gb|EEY29315.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 5 str. 513]
Length = 498
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|17987921|ref|NP_540555.1| oxidoreductase [Brucella melitensis bv. 1 str. 16M]
gi|260563372|ref|ZP_05833858.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 1 str. 16M]
gi|265990422|ref|ZP_06102979.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 1 str. Rev.1]
gi|17983658|gb|AAL52819.1| glutamate synthase (nadph) small chain [Brucella melitensis bv. 1
str. 16M]
gi|260153388|gb|EEW88480.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 1 str. 16M]
gi|263001206|gb|EEZ13781.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 1 str. Rev.1]
Length = 498
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|225851830|ref|YP_002732063.1| putative oxidoreductase [Brucella melitensis ATCC 23457]
gi|256264654|ref|ZP_05467186.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|261218306|ref|ZP_05932587.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M13/05/1]
gi|261221505|ref|ZP_05935786.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti B1/94]
gi|261315464|ref|ZP_05954661.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M163/99/10]
gi|261316969|ref|ZP_05956166.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis B2/94]
gi|261320845|ref|ZP_05960042.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M644/93/1]
gi|261324423|ref|ZP_05963620.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella neotomae 5K33]
gi|261757525|ref|ZP_06001234.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
gi|265988005|ref|ZP_06100562.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M292/94/1]
gi|265994250|ref|ZP_06106807.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 3 str. Ether]
gi|265997468|ref|ZP_06110025.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M490/95/1]
gi|294851671|ref|ZP_06792344.1| glutamate synthase subunit small [Brucella sp. NVSL 07-0026]
gi|384210677|ref|YP_005599759.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Brucella melitensis M5-90]
gi|384407778|ref|YP_005596399.1| putative oxidoreductase [Brucella melitensis M28]
gi|384444399|ref|YP_005603118.1| putative oxidoreductase [Brucella melitensis NI]
gi|225640195|gb|ACO00109.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis ATCC 23457]
gi|260920089|gb|EEX86742.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti B1/94]
gi|260923395|gb|EEX89963.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M13/05/1]
gi|261293535|gb|EEX97031.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M644/93/1]
gi|261296192|gb|EEX99688.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis B2/94]
gi|261300403|gb|EEY03900.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella neotomae 5K33]
gi|261304490|gb|EEY07987.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M163/99/10]
gi|261737509|gb|EEY25505.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
gi|262551936|gb|EEZ07926.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M490/95/1]
gi|262765363|gb|EEZ11152.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 3 str. Ether]
gi|263095023|gb|EEZ18731.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|264660202|gb|EEZ30463.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M292/94/1]
gi|294820260|gb|EFG37259.1| glutamate synthase subunit small [Brucella sp. NVSL 07-0026]
gi|326408325|gb|ADZ65390.1| putative oxidoreductase [Brucella melitensis M28]
gi|326538040|gb|ADZ86255.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Brucella melitensis M5-90]
gi|349742395|gb|AEQ07938.1| putative oxidoreductase [Brucella melitensis NI]
Length = 498
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|161618262|ref|YP_001592149.1| putative oxidoreductase [Brucella canis ATCC 23365]
gi|163842567|ref|YP_001626971.1| putative oxidoreductase [Brucella suis ATCC 23445]
gi|260567095|ref|ZP_05837565.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
str. 40]
gi|376274950|ref|YP_005115389.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Brucella canis HSK A52141]
gi|161335073|gb|ABX61378.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella canis ATCC 23365]
gi|163673290|gb|ABY37401.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis ATCC 23445]
gi|260156613|gb|EEW91693.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
str. 40]
gi|363403517|gb|AEW13812.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Brucella canis HSK A52141]
Length = 498
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|148559867|ref|YP_001258322.1| putative oxidoreductase [Brucella ovis ATCC 25840]
gi|148371124|gb|ABQ61103.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella ovis ATCC 25840]
Length = 498
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGNHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|83944377|ref|ZP_00956832.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Sulfitobacter sp. EE-36]
gi|83844921|gb|EAP82803.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Sulfitobacter sp. EE-36]
Length = 440
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+ H L AL A RC C DAPC +CPT IDI FI I+ AAK I
Sbjct: 23 QFSDL-HPPLDVHEALVAADRCYFCHDAPCITACPTDIDIPLFIRQIATGTPDAAAKTIL 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N +G C VCPT LC C AE P+ IG LQ++AT+ + G P +
Sbjct: 82 SQNIMGGMCARVCPTEQLCEQACVREVAEGKPVKIGELQRYATDHLQAQGAH----PFER 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
++A++G GPA LSCA L+ MG+ D+T+++ N Y + T +P
Sbjct: 138 AASTGKRVAVVGAGPAGLSCAHRLAMMGH-DVTVFDARPKPGGLNEYGIATYKTP 191
>gi|254250833|ref|ZP_04944152.1| NADPH-dependent glutamate synthase beta chain [Burkholderia
cenocepacia PC184]
gi|124879967|gb|EAY67323.1| NADPH-dependent glutamate synthase beta chain [Burkholderia
cenocepacia PC184]
Length = 445
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G Q R P+T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRA------PETGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|83953419|ref|ZP_00962141.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Sulfitobacter sp. NAS-14.1]
gi|83842387|gb|EAP81555.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Sulfitobacter sp. NAS-14.1]
Length = 440
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+ H L AL A RC C DAPC +CPT IDI FI I+ AAK I
Sbjct: 23 QFSDL-HPPLDVHEALVAADRCYFCHDAPCITACPTDIDIPLFIRQIATGTPDAAAKTIL 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N +G C VCPT LC C AE P+ IG LQ++AT+ + G P +
Sbjct: 82 SQNIMGGMCARVCPTEQLCEQACVREVAEGKPVKIGELQRYATDHLQAQGAH----PFER 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVTNVSP 188
++A++G GPA LSCA L+ MG+ D+T+++ N Y + T +P
Sbjct: 138 AASTGKRVAVVGAGPAGLSCAHRLAMMGH-DVTVFDARPKPGGLNEYGIATYKTP 191
>gi|398839871|ref|ZP_10597113.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM102]
gi|398111834|gb|EJM01710.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM102]
Length = 455
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP+ IDI SFI +I +N G
Sbjct: 15 AAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + F +
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVDNAHFNEH-- 131
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 132 -----PFQRAASTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|388468731|ref|ZP_10142941.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas synxantha BG33R]
gi|388012311|gb|EIK73498.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas synxantha BG33R]
Length = 455
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L + F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N G
Sbjct: 15 AATLASQFSDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA+ I S N LG +C VCPT LC C AEE P+ IG LQ++A + F +
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAIDNAHFSEHPF 133
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA L+CA + G+ D+ I+E
Sbjct: 134 QRAAP-------TGKRIAVVGAGPAGLACAHRAALHGH-DVVIFE 170
>gi|197295564|ref|YP_002154105.1| putative oxidoreductase [Burkholderia cenocepacia J2315]
gi|444365806|ref|ZP_21165918.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderia
cenocepacia K56-2Valvano]
gi|195945043|emb|CAR57668.1| putative pyridine nucleotide-disulphide oxidoreductase family
protein [Burkholderia cenocepacia J2315]
gi|443605614|gb|ELT73455.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderia
cenocepacia K56-2Valvano]
Length = 445
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G Q R P+T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRA------PETGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|331003588|ref|ZP_08327085.1| hypothetical protein HMPREF0491_01947 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412429|gb|EGG91820.1| hypothetical protein HMPREF0491_01947 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 402
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
K T + R A++EASRCL C DAPC K CP D FI S+ KN GAA+ I +NPL
Sbjct: 13 KSTGFNYRLAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSLRFKNIKGAAETIRENNPL 72
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD 145
G +C VCP +C C+ ++ PI IG +Q++ E + M ++ K+
Sbjct: 73 GGSCAWVCPYDRMCEEECSRCGIDK-PIQIGKIQRYLVEEEQAMS-AKFVGAGKKI---G 127
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQG 205
K+ALIG GPASL+CA L+ G D TI+EK + G T L P++
Sbjct: 128 KKVALIGAGPASLACARELAIAGV-DTTIFEKQ-----ARAGGVLRYGITPTRL--PDRV 179
Query: 206 SFLNIELISE 215
+IELI E
Sbjct: 180 VDFDIELIKE 189
>gi|170735206|ref|YP_001774320.1| putative oxidoreductase [Burkholderia cenocepacia MC0-3]
gi|169821244|gb|ACA95825.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia cenocepacia MC0-3]
Length = 445
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G Q R P+T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRA------PETGCHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|14590734|ref|NP_142804.1| oxidoreductase [Pyrococcus horikoshii OT3]
gi|3257287|dbj|BAA29970.1| 472aa long hypothetical glutamate synthase small chain [Pyrococcus
horikoshii OT3]
gi|116248637|gb|ABJ90457.1| glutamate synthase small subunit-like protein 1 [Pyrococcus
horikoshii]
Length = 472
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
A KEA RCL+C APC K CP I+I +FI I + GA + I++DN L G V
Sbjct: 35 AKKEAERCLQCPPEYAPCIKGCPVHINIPAFIAKIKEGDIKGALRIIWNDNTLPAITGRV 94
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFPDTKIAL 150
CP D C G C + + P+NIG L++F + ++ GI + +R K D K+A+
Sbjct: 95 CPQEDQCEGACVVGKVGD-PVNIGKLERFVADYAREHGIEEELLREFTEKCDGSKGKVAV 153
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
+G GPA L+CA L++MGY +TI+E
Sbjct: 154 VGAGPAGLTCAGELAKMGY-KVTIFE 178
>gi|419718475|ref|ZP_14245792.1| pyridine nucleotide-disulfide oxidoreductase [Lachnoanaerobaculum
saburreum F0468]
gi|383305310|gb|EIC96678.1| pyridine nucleotide-disulfide oxidoreductase [Lachnoanaerobaculum
saburreum F0468]
Length = 402
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
K T + R A++EASRCL C DAPC K CP D FI S+ KN GAA+ I +NPL
Sbjct: 13 KSTGFNYRLAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSLRFKNIKGAAETIRENNPL 72
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD 145
G +C VCP +C C+ ++ PI IG +Q++ E + M ++ K+
Sbjct: 73 GGSCAWVCPYDRMCEEECSRCGIDK-PIQIGKIQRYLVEEEQAMS-AKFVGAGKKI---G 127
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQG 205
K+ALIG GPASL+CA L+ G D TI+EK + G T L P++
Sbjct: 128 KKVALIGAGPASLACARELAIAGV-DTTIFEKQ-----AKAGGVLRYGITPTRL--PDRV 179
Query: 206 SFLNIELISE 215
+IELI E
Sbjct: 180 VDFDIELIKE 189
>gi|107023147|ref|YP_621474.1| oxidoreductase [Burkholderia cenocepacia AU 1054]
gi|116686613|ref|YP_839860.1| oxidoreductase [Burkholderia cenocepacia HI2424]
gi|105893336|gb|ABF76501.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia cenocepacia AU 1054]
gi|116652328|gb|ABK12967.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia cenocepacia HI2424]
Length = 445
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G Q R P+T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRA------PETGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|265983447|ref|ZP_06096182.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella sp. 83/13]
gi|306838285|ref|ZP_07471131.1| oxidoreductase [Brucella sp. NF 2653]
gi|264662039|gb|EEZ32300.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella sp. 83/13]
gi|306406576|gb|EFM62809.1| oxidoreductase [Brucella sp. NF 2653]
Length = 498
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGSHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|398991514|ref|ZP_10694640.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM24]
gi|399016101|ref|ZP_10718347.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM16]
gi|398106524|gb|EJL96553.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM16]
gi|398139106|gb|EJM28108.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM24]
Length = 455
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 14 SAAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVP 72
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A +
Sbjct: 73 GAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVLIGLLQRYAVD-----NAH 127
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FTEHPFQRAATTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|398975538|ref|ZP_10685647.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM25]
gi|398140215|gb|EJM29187.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM25]
Length = 455
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 14 SAAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVP 72
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A +
Sbjct: 73 GAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVLIGLLQRYAVD-----NAH 127
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FTEHPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|421870173|ref|ZP_16301810.1| Pyridine nucleotide-disulphide oxidoreductase associated with
reductive pyrimidine catabolism [Burkholderia
cenocepacia H111]
gi|358070780|emb|CCE52688.1| Pyridine nucleotide-disulphide oxidoreductase associated with
reductive pyrimidine catabolism [Burkholderia
cenocepacia H111]
Length = 445
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G Q R P+T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRA------PETGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|163744664|ref|ZP_02152024.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Oceanibulbus indolifex HEL-45]
gi|161381482|gb|EDQ05891.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Oceanibulbus indolifex HEL-45]
Length = 443
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
F D+ H L E AL A RC C DAPC +CPT IDI FI I+ AAK I
Sbjct: 22 EGFSDL-HPPLDEHEALVAADRCYFCHDAPCMTACPTDIDIPLFIRQIATGTPDAAAKTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N LG C VCPT LC C AE P+ IG LQ++AT+ + G+ P
Sbjct: 81 LSQNILGGMCARVCPTETLCEEVCVREIAEGKPVLIGQLQRYATDHLQVQGVH----PFE 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYD 170
+ ++A++G GPA LSCA L+ +G+D
Sbjct: 137 RAAVTGKRVAVVGAGPAGLSCAHRLAMLGHD 167
>gi|389683714|ref|ZP_10175045.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas chlororaphis O6]
gi|388552053|gb|EIM15315.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas chlororaphis O6]
Length = 455
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI I N G
Sbjct: 15 AATLAGHFSDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRHIHTDNVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + + SQ
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVD---NAHFSQ 130
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ ++ I+E
Sbjct: 131 --HPFQRAAASGKRIAVVGAGPAGLSCAHRCAMHGH-EVVIFE 170
>gi|312602355|ref|YP_004022200.1| dihydropyrimidine dehydrogenase [NADP+] subunit alpha [Burkholderia
rhizoxinica HKI 454]
gi|312169669|emb|CBW76681.1| Dihydropyrimidine dehydrogenase [NADP+] alpha subunit (EC 1.3.1.2)
[Burkholderia rhizoxinica HKI 454]
Length = 467
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
++ L NF D+ L A+ EA+RC C DAPC +CPT IDI FI I + N
Sbjct: 15 LSADQLAANFADVA-PPLGAHAAVVEANRCHYCYDAPCVSACPTGIDIPGFIRKIGNGNL 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA+ I NPLG C VCPT LC G C + P+ IG LQ+ AT+ +
Sbjct: 74 KGAARDILLVNPLGGMCARVCPTEILCEGACVRNKQDGKPVAIGALQRHATDHQMAREAT 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+P + +A++G GPA L+CA L++ G+ +TI++ +
Sbjct: 134 SGKPLFTRAADTGRHVAVVGSGPAGLACAHTLAQAGH-RVTIFDAH 178
>gi|229591376|ref|YP_002873495.1| putative oxidoreductase [Pseudomonas fluorescens SBW25]
gi|229363242|emb|CAY50335.1| putative glutamate synthase small subunit protein [Pseudomonas
fluorescens SBW25]
Length = 455
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 12/168 (7%)
Query: 12 VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKN 71
V +L ++F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N
Sbjct: 12 VEDGATLASHFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTEN 70
Query: 72 YYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKD 128
GAA+ I S N LG +C VCPT LC C AEE P+ IG LQ++A + F +
Sbjct: 71 VQGAAQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAIDNAHFSE 130
Query: 129 MGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA L+CA + G+ D+ I+E
Sbjct: 131 HPFQRAAP-------TGKRIAVVGAGPAGLACAHRAALHGH-DVVIFE 170
>gi|167590079|ref|ZP_02382467.1| putative oxidoreductase [Burkholderia ubonensis Bu]
Length = 445
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPGFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + + P+ IG LQ+ AT+ G R PDT +A++G GPA
Sbjct: 100 EGACVRHHQDAQPVAIGALQRHATDWAMATGAVSFRRA------PDTGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYEKNT 179
L+CA L+ G+ +T+++ +
Sbjct: 154 LACAHRLALAGH-RVTLFDAHA 174
>gi|423094817|ref|ZP_17082613.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens Q2-87]
gi|397884895|gb|EJL01378.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens Q2-87]
Length = 455
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 87/162 (53%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N GA
Sbjct: 16 ATLAARFSDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
AK I S N LG +C VCPT LC C A E P+ IG LQ++A +
Sbjct: 75 AKKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVLIGQLQRYAVD-----NAHFT 129
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 130 EHPFKRAASTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|254485507|ref|ZP_05098712.1| glutamate synthase (NADPH), homotetrameric [Roseobacter sp. GAI101]
gi|214042376|gb|EEB83014.1| glutamate synthase (NADPH), homotetrameric [Roseobacter sp. GAI101]
Length = 440
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 81/150 (54%), Gaps = 5/150 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+ H L AL A RC C DAPC +CPT IDI FI I+ AAK I
Sbjct: 23 QFSDL-HPPLDPHAALVAADRCYFCHDAPCITACPTDIDIPLFIRQIATGTPDAAAKTIL 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N +G C VCPT LC C AE P+ IG LQ++AT+ ++ G + P +
Sbjct: 82 SQNIMGGMCARVCPTEQLCEQACVREEAEGKPVKIGQLQRYATDHLQEQG----KHPFER 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYD 170
+ ++A++G GPA LSCA L+ +G+D
Sbjct: 138 GEATGKRVAVVGAGPAGLSCAHRLAMLGHD 167
>gi|294678051|ref|YP_003578666.1| pyridine nucleotide-disulfide oxidoreductase [Rhodobacter
capsulatus SB 1003]
gi|3169863|gb|AAC17982.1| NADPH dependent glutamate synthase small subunit homolog838
[Rhodobacter capsulatus SB 1003]
gi|294476871|gb|ADE86259.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodobacter capsulatus SB 1003]
Length = 443
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A A+RC CA+APC +CP+ ID+ FI I AA+ I S N +G C
Sbjct: 31 LTAHQAQVAAARCYFCAEAPCTTACPSDIDVPLFIRQILTGTPEAAARTILSQNIMGGMC 90
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
VCPT LC G C AAE P+ IG LQ+FAT+ + G+ P + + +A
Sbjct: 91 ARVCPTETLCEGACVREAAEGMPVEIGALQRFATDRLQAAGVH----PFTRAPRTEKSVA 146
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYEKN 178
++G GPA L+CA L+ +G+ ++T+Y+
Sbjct: 147 VVGAGPAGLACAHRLAMLGH-EVTVYDAR 174
>gi|387894480|ref|YP_006324777.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens A506]
gi|387162567|gb|AFJ57766.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens A506]
Length = 455
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L ++F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I +N GA
Sbjct: 16 ATLASHFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTENVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
A+ I S N LG +C VCPT LC C AEE P+ IG LQ++A + + S+
Sbjct: 75 AQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAID---NAHFSE- 130
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA L+CA + G+ D+ I+E
Sbjct: 131 -HPFQRAASTGKRIAVVGAGPAGLACAHRAALHGH-DVVIFE 170
>gi|171320520|ref|ZP_02909547.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia ambifaria MEX-5]
gi|171094240|gb|EDT39320.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia ambifaria MEX-5]
Length = 445
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TS L F DI L A ASRC C DAPC ++CPTQIDI SFI I + N
Sbjct: 14 LTSTQLSCEFADIA-PLLDPTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNL 72
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA I S NPLG C VCPT LC G C + P+ IG LQ+ AT+ G
Sbjct: 73 KGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMATGAV 132
Query: 133 QI-RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ R PD +A++G GPA L+CA L+ G+ +T+++
Sbjct: 133 RFTRAPDTG-----RHVAVVGAGPAGLACAHRLALAGH-RVTLFD 171
>gi|172065005|ref|YP_001815717.1| putative oxidoreductase [Burkholderia ambifaria MC40-6]
gi|171997247|gb|ACB68164.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia ambifaria MC40-6]
Length = 445
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TS L F DI L A ASRC C DAPC ++CPTQIDI SFI I + N
Sbjct: 14 LTSTQLSCEFADIA-PLLDPTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNL 72
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA I S NPLG C VCPT LC G C + P+ IG LQ+ AT+ G
Sbjct: 73 KGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMATGAV 132
Query: 133 QI-RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ R PD +A++G GPA L+CA L+ G+ +T+++
Sbjct: 133 RFTRAPDTG-----RHVAVVGAGPAGLACAHRLALAGH-RVTLFD 171
>gi|425898960|ref|ZP_18875551.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397890244|gb|EJL06726.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 455
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI I N GAA
Sbjct: 17 TLAGHFSDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRHIHTDNVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + + SQ
Sbjct: 76 QKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVD---NAHFSQ-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ ++ I+E
Sbjct: 131 HPFQRAAASGKRIAVVGAGPAGLSCAHRCAMHGH-EVVIFE 170
>gi|325273454|ref|ZP_08139702.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. TJI-51]
gi|324101410|gb|EGB99008.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas sp. TJI-51]
Length = 455
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 8 AGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSI 67
AG + C F D+ L+ R A E++RCL C DAPC +CP++IDI SFI I
Sbjct: 13 AGADQLAEC-----FSDLA-PPLTARQAAVESARCLYCYDAPCVNACPSEIDIPSFIHRI 66
Query: 68 SHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE-- 124
S +N GAA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A +
Sbjct: 67 SDENLQGAAERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNA 126
Query: 125 VFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F D Q P K +IA++G GPA L+CA L+ G+ D+ ++E
Sbjct: 127 QFSDHPF-QRSPATGK------RIAVVGAGPAGLACAHRLAMHGH-DVVVFE 170
>gi|407774047|ref|ZP_11121346.1| dihydropyrimidine dehydrogenase subunit A [Thalassospira
profundimaris WP0211]
gi|407282706|gb|EKF08263.1| dihydropyrimidine dehydrogenase subunit A [Thalassospira
profundimaris WP0211]
Length = 452
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 88/159 (55%), Gaps = 9/159 (5%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+ F D+ H S A+ E++RCL C DAPC +CPT IDI SFI IS N GAAK I
Sbjct: 26 DGFSDL-HPAYSTLQAMAESNRCLYCYDAPCVTACPTSIDIPSFIRKISTGNPDGAAKTI 84
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPP 137
S N +G TC CPT LC C AE+ + IG LQ++A + + +D+ R P
Sbjct: 85 LSANIMGGTCARACPTEVLCEEACVRNVAEDTAVEIGSLQRYAVDHLMARDLPHPFKRAP 144
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA LSCA + +G+ D+ ++E
Sbjct: 145 KT-----GKTIAVVGAGPAGLSCAHRAAMLGH-DVVVFE 177
>gi|115360707|ref|YP_777844.1| oxidoreductase [Burkholderia ambifaria AMMD]
gi|115286035|gb|ABI91510.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia ambifaria AMMD]
Length = 445
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TS L F DI L A ASRC C DAPC ++CPTQIDI SFI I + N
Sbjct: 14 LTSTQLSCEFADIA-PLLDPTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNL 72
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA I S NPLG C VCPT LC G C + P+ IG LQ+ AT+ G
Sbjct: 73 KGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMATGAV 132
Query: 133 QI-RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ R PD +A++G GPA L+CA L+ G+ +T+++
Sbjct: 133 RFTRAPDTG-----RHVAVVGAGPAGLACAHRLALAGH-RVTLFD 171
>gi|189347484|ref|YP_001944013.1| oxidoreductase [Chlorobium limicola DSM 245]
gi|189341631|gb|ACD91034.1| glutamate synthase (NADPH), homotetrameric [Chlorobium limicola DSM
245]
Length = 480
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF+++ E A KEA RC++C D C K CP I I FI I+ N+ GAAK
Sbjct: 28 VRNFNEVNLGYTPEI-AQKEAMRCIQCKDPICIKGCPVNIKIDKFIKLIAEGNFLGAAKK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I DN L CG VCP D C C L + P+ IG L++FA + ++ G QI P+
Sbjct: 87 IKEDNILPAICGRVCPQEDQCEKVCVL-TKKYTPVAIGNLERFAADYEREHG--QIELPE 143
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ KIA+IG GPA LSCA L+R G+ +T++E
Sbjct: 144 VQAS-TGKKIAVIGSGPAGLSCANDLARFGH-SVTVFE 179
>gi|398939286|ref|ZP_10668460.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM41(2012)]
gi|398164411|gb|EJM52549.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM41(2012)]
Length = 483
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I +N G
Sbjct: 43 AAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQENVQG 101
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C E P+ IG LQ++A + + S+
Sbjct: 102 AAQKILSANILGGSCARVCPTEVLCQQACVRNNDHECAPVLIGLLQRYAVD---NAHFSE 158
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 159 --HPFTRAASTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 198
>gi|306844923|ref|ZP_07477505.1| oxidoreductase [Brucella inopinata BO1]
gi|306274752|gb|EFM56536.1| oxidoreductase [Brucella inopinata BO1]
Length = 498
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
FDD+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FDDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGGHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 VETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|170701516|ref|ZP_02892468.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia ambifaria IOP40-10]
gi|170133573|gb|EDT01949.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia ambifaria IOP40-10]
Length = 445
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
TS L F DI L A ASRC C DAPC ++CPTQIDI SFI I + N
Sbjct: 14 LTSTQLSCEFADIA-PLLDPTAAAAAASRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNL 72
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA I S NPLG C VCPT LC G C + P+ IG LQ+ AT+ G
Sbjct: 73 KGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMATGAV 132
Query: 133 QI-RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ R PD +A++G GPA L+CA L+ G+ +T+++
Sbjct: 133 RFTRAPDTG-----RHVAVVGAGPAGLACAHRLALAGH-RVTLFD 171
>gi|126741277|ref|ZP_01756956.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseobacter sp. SK209-2-6]
gi|126717682|gb|EBA14405.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseobacter sp. SK209-2-6]
Length = 444
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
+ NF D+ H A A RC C DAPC +CPT IDI FI I + AAK
Sbjct: 20 IAENFGDL-HPAYDPHEAAVAADRCYFCFDAPCMTACPTSIDIPQFIREIQAGHPASAAK 78
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I N LG C VCPT LC C AAE P+ IG LQ++AT++ + G R
Sbjct: 79 TILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRYATDILMERGEHPFR-- 136
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+ + ++A+ G GPA LS A L+ +G+ D+ +Y+ +
Sbjct: 137 --RAESTGKRVAVAGAGPAGLSAAHRLAMLGH-DVVVYDAKS 175
>gi|104782303|ref|YP_608801.1| putative oxidoreductase [Pseudomonas entomophila L48]
gi|95111290|emb|CAK16010.1| putative oxidase, pyridine nucleotide-disulphide family
[Pseudomonas entomophila L48]
Length = 455
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP+ IDI SFI IS +N GAA
Sbjct: 17 QLAERFTDLA-PPLTARQAALESARCLYCYDAPCVNACPSDIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + S+
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYA---LDNAQFSE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRAPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|149915522|ref|ZP_01904048.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseobacter sp. AzwK-3b]
gi|149810414|gb|EDM70257.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseobacter sp. AzwK-3b]
Length = 444
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L A A RC C DAPC +CPT+IDI FI I+ AA+ I
Sbjct: 26 ENFSDL-HPRLQGHEAHVAADRCYFCHDAPCIAACPTEIDIPLFIRQIATGTPEAAAETI 84
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N LG C VCPT LC C AAE P+ IG LQ++AT+ + G P
Sbjct: 85 LSQNILGGMCARVCPTETLCEQACVREAAEGKPVLIGQLQRYATDTLMEAGTH----PFT 140
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ +IA++G GPA L+CA L+ G+ D+T+Y+
Sbjct: 141 RAAPTGKRIAVVGAGPAGLACAHRLAMKGH-DVTMYD 176
>gi|402702650|ref|ZP_10850629.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas fragi A22]
Length = 455
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 12/165 (7%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L ++F D+ L+ R A+ E+SRCL C DAPC +CP+ IDI SFI +I +N G
Sbjct: 15 AVALASHFTDLA-PPLNARQAVLESSRCLYCYDAPCVNACPSDIDIPSFIRNIQQENVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGI 131
AA I S N LG +C VCPT LC C +E P+ IG LQ++A + F +
Sbjct: 74 AAHKILSANILGGSCARVCPTEVLCQQACVRNNDQECAPVLIGLLQRYAVDNAQFSEYPF 133
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ P +IA++G GPA L+CA L+ +G+ ++ I+E
Sbjct: 134 TRAAP-------TGKRIAVVGAGPAGLACAHRLALLGH-EVVIFE 170
>gi|424922688|ref|ZP_18346049.1| NADPH-dependent glutamate synthase beta chain [Pseudomonas
fluorescens R124]
gi|404303848|gb|EJZ57810.1| NADPH-dependent glutamate synthase beta chain [Pseudomonas
fluorescens R124]
Length = 455
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L +F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 14 SAAALAGHFTDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVP 72
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A +
Sbjct: 73 GAAQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVD-----NAH 127
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FTEHPFQRSAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|397696040|ref|YP_006533923.1| oxidoreductase [Pseudomonas putida DOT-T1E]
gi|397332770|gb|AFO49129.1| putative oxidoreductase [Pseudomonas putida DOT-T1E]
Length = 455
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + +
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSA----- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSAATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|121606903|ref|YP_984232.1| putative oxidoreductase [Polaromonas naphthalenivorans CJ2]
gi|120595872|gb|ABM39311.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Polaromonas naphthalenivorans CJ2]
Length = 448
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA RCL C DAPC +CPT ID+ SFI I N GAA+ I NPLG C VCP
Sbjct: 35 AVLEAERCLYCYDAPCVTACPTGIDVPSFIRRIGDGNVRGAARTILESNPLGGMCARVCP 94
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI--RPPDAKVDFPDTKIALIG 152
T LC C E P+ IG LQ+ A + + Q+ R P ++A++G
Sbjct: 95 TETLCEAACVRTTQEGKPVAIGRLQRHAVDAVMESDRPQLFTRAPST-----GRRVAVVG 149
Query: 153 CGPASLSCATFLSRMGYD 170
GPA L+CA L+ +G++
Sbjct: 150 AGPAGLACAHTLALLGHE 167
>gi|421520300|ref|ZP_15966966.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas putida LS46]
gi|402755854|gb|EJX16322.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas putida LS46]
Length = 455
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + +
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSA----- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSAATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|77459664|ref|YP_349171.1| oxidoreductase [Pseudomonas fluorescens Pf0-1]
gi|77383667|gb|ABA75180.1| putative glutamate synthase small subunit protein [Pseudomonas
fluorescens Pf0-1]
Length = 481
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 40 SAAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVP 98
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C A E P+ IG LQ++A + +
Sbjct: 99 GAAQKILSANILGGSCARVCPTEILCQQACVRNNAHECAPVLIGLLQRYAVD-----NAN 153
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ ++ I+E
Sbjct: 154 FTEHPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-EVVIFE 196
>gi|26990739|ref|NP_746164.1| oxidoreductase [Pseudomonas putida KT2440]
gi|24985735|gb|AAN69628.1|AE016596_6 glutamate synthase, small subunit, putative [Pseudomonas putida
KT2440]
Length = 455
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + +
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSA----- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSAATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|148547036|ref|YP_001267138.1| putative oxidoreductase [Pseudomonas putida F1]
gi|148511094|gb|ABQ77954.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pseudomonas putida F1]
Length = 478
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 40 QLAERFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 98
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + +
Sbjct: 99 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSA----- 153
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 154 HPFKRSATTGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 193
>gi|386011374|ref|YP_005929651.1| Putative oxidoreductase [Pseudomonas putida BIRD-1]
gi|313498080|gb|ADR59446.1| Putative oxidoreductase [Pseudomonas putida BIRD-1]
Length = 455
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + +
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSA----- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSAATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|339488341|ref|YP_004702869.1| putative oxidoreductase [Pseudomonas putida S16]
gi|338839184|gb|AEJ13989.1| putative oxidoreductase [Pseudomonas putida S16]
Length = 455
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 113/228 (49%), Gaps = 34/228 (14%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP+ IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAAVESARCLYCYDAPCVNACPSDIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGISQ 133
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + F + Q
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAHFTEHPF-Q 134
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------TYD 181
P K +IA++G GPA LSCA L+ G+ D+ ++E + Y
Sbjct: 135 RSPATGK------RIAVVGAGPAGLSCAHRLAMHGH-DVVVFEASDKAGGLNEYGIARYK 187
Query: 182 MVTNVSPRIVK------GTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
+V + + R V+ G RH G GS N+ L + Y V+
Sbjct: 188 LVDDYAQREVEFLLGIGGIEIRH--GQRLGS--NLGLGELRDQYDAVF 231
>gi|395448346|ref|YP_006388599.1| putative oxidoreductase [Pseudomonas putida ND6]
gi|388562343|gb|AFK71484.1| putative oxidoreductase [Pseudomonas putida ND6]
Length = 455
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP++IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + +
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSA----- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSATTGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|78059774|ref|YP_366349.1| oxidoreductase [Burkholderia sp. 383]
gi|77964324|gb|ABB05705.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. 383]
Length = 445
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ + G + R PD + ++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMETGAVRFTRAPDTG-----RHVVVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTLFD 171
>gi|423692357|ref|ZP_17666877.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens SS101]
gi|387997782|gb|EIK59111.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens SS101]
Length = 455
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L + F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N GA
Sbjct: 16 ATLASQFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTDNVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGIS 132
A+ I S N LG +C VCPT LC C AEE P+ IG LQ++A + F +
Sbjct: 75 AQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAIDNAHFSEHPFQ 134
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P +IA++G GPA L+CA + G+ D+ I+E
Sbjct: 135 RAAP-------TGKRIAVVGAGPAGLACAHRAALHGH-DVVIFE 170
>gi|167034635|ref|YP_001669866.1| putative oxidoreductase [Pseudomonas putida GB-1]
gi|166861123|gb|ABY99530.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pseudomonas putida GB-1]
Length = 455
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP+ IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAAVESARCLYCYDAPCVNACPSDIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + S+
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYA---LDNAQFSE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|399009908|ref|ZP_10712308.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM17]
gi|398109055|gb|EJL98995.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM17]
Length = 459
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI I N GA
Sbjct: 16 ATLAGHFSDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRHIHTDNVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
A+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + + SQ
Sbjct: 75 AQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVD---NAHFSQ- 130
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ ++ I+E
Sbjct: 131 -HPFQREAASGKRIAVVGAGPAGLSCAHRCAMHGH-EVVIFE 170
>gi|398875751|ref|ZP_10630914.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM67]
gi|398205963|gb|EJM92738.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM67]
Length = 455
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 8/166 (4%)
Query: 12 VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKN 71
V + +L +F D+ L++R A EASRCL C DAPC +CP+ IDI SFI +I N
Sbjct: 12 VENAAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQDN 70
Query: 72 YYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMG 130
GAA+ I S N LG +C VCPT LC C E P+ IG LQ++A + +
Sbjct: 71 VQGAAQKILSANILGGSCARVCPTEILCQQACVRNNDHECAPVLIGLLQRYAVD---NAN 127
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
S+ P A +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FSEHPFPRAAA--TGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|254449571|ref|ZP_05063008.1| glutamate synthase (NADPH) small chain [Octadecabacter arcticus
238]
gi|198263977|gb|EDY88247.1| glutamate synthase (NADPH) small chain [Octadecabacter arcticus
238]
Length = 415
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 39 ASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDL 98
A RC C DAPC +CPT IDI FI I+ AAK IF N LG C VCPT DL
Sbjct: 10 ADRCYFCHDAPCITACPTDIDIPLFIRQIATGTPDAAAKTIFDMNILGGMCARVCPTEDL 69
Query: 99 CMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASL 158
C C AE P+ IG LQ+FAT+ G+ P + KIA++G GPA L
Sbjct: 70 CEQACVRELAEGKPVEIGRLQRFATDTVMAKGVM----PFTRAAPTGKKIAVVGAGPAGL 125
Query: 159 SCATFLSRMGYDDITIYE 176
SCA L+ +G +D+T+Y+
Sbjct: 126 SCAHRLAMLG-NDVTVYD 142
>gi|255528043|ref|ZP_05394878.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Clostridium carboxidivorans P7]
gi|296188157|ref|ZP_06856549.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium
carboxidivorans P7]
gi|255508257|gb|EET84662.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Clostridium carboxidivorans P7]
gi|296047283|gb|EFG86725.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium
carboxidivorans P7]
Length = 421
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 29 TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLT 88
TL+ A++EASRCL C DAPC K+CP D FI S+ +N GA + I ++NPLG
Sbjct: 11 TLTNFLAIEEASRCLLCYDAPCSKACPAGTDPGKFIRSLRFRNLKGAIETIRTNNPLGGI 70
Query: 89 CGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKI 148
C VCP C G C+ ++ PI IG LQ++ T+ K+ + + K K+
Sbjct: 71 CARVCPYDKYCEGACSRCGIDK-PIKIGDLQRYLTDYEKNSNMKVME----KSKLDKEKV 125
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYEKN 178
A+IG GP+ LS A LS+ GY +T++E+
Sbjct: 126 AVIGSGPSGLSVAAILSQKGY-KVTVFEQK 154
>gi|407362171|ref|ZP_11108703.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas mandelii
JR-1]
Length = 455
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
+ +L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I N G
Sbjct: 15 AAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVQG 73
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQ 133
AA+ I S N LG +C VCPT LC C E P+ IG LQ++A + + S+
Sbjct: 74 AAQKILSANILGGSCARVCPTEILCQQACVRNNDHECAPVLIGLLQRYAVD---NAHFSE 130
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 131 --HPFQRAATTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|187933662|ref|YP_001886507.1| oxidoreductase [Clostridium botulinum B str. Eklund 17B]
gi|187721815|gb|ACD23036.1| hypothetical oxidoreductase YeiT [Clostridium botulinum B str.
Eklund 17B]
Length = 423
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++E+SRCL C DAPC ++CP + FI S+ +N GA + I +N LG C VCP
Sbjct: 20 AIEESSRCLLCYDAPCSQACPIGTNPAKFIRSLRFRNLKGAVETIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ + ++ PI I LQQ+ T+ +G+ + KV+ K+A++G G
Sbjct: 80 TKKYCEGACSRTSIDK-PIEIAKLQQYLTDYENVLGLEILN----KVEINKEKVAIVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
P+ L+ AT L+++GY ++T++EK
Sbjct: 135 PSGLAAATKLAQLGY-NVTVFEK 156
>gi|417342387|ref|ZP_12123212.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357956700|gb|EHJ82022.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 151
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC + CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQDCPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIGAG 133
Query: 155 PASLSCATFLSRM 167
PA L + L+R
Sbjct: 134 PAGLQASVTLTRQ 146
>gi|431803360|ref|YP_007230263.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas putida
HB3267]
gi|430794125|gb|AGA74320.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas putida
HB3267]
Length = 455
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L F D+ L+ R A E++RCL C DAPC +CP+ IDI SFI IS +N GAA
Sbjct: 17 QLAERFSDLA-PPLTARQAAVESARCLYCYDAPCVNACPSDIDIPSFIHRISDENLQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATE--VFKDMGISQ 133
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + F + Q
Sbjct: 76 ERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAHFTEHPF-Q 134
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P K +IA++G GPA LSCA L+ G+ D+ ++E
Sbjct: 135 RSPATGK------RIAVVGAGPAGLSCAHRLAMHGH-DVVVFE 170
>gi|398881813|ref|ZP_10636787.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM60]
gi|398200026|gb|EJM86954.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM60]
Length = 455
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 8/166 (4%)
Query: 12 VFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKN 71
V + +L +F D+ L++R A EASRCL C DAPC +CP+ IDI SFI +I N
Sbjct: 12 VENAAALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQDN 70
Query: 72 YYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMG 130
GAA+ I S N LG +C VCPT LC C E P+ IG LQ++A + +
Sbjct: 71 VQGAAQKILSANILGGSCARVCPTEILCQQACVRNNDHECAPVLIGLLQRYAVD---NAH 127
Query: 131 ISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
S+ P A +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FSEHPFPRAAA--TGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|152987532|ref|YP_001345937.1| putative oxidoreductase [Pseudomonas aeruginosa PA7]
gi|150962690|gb|ABR84715.1| probable oxidoreductase [Pseudomonas aeruginosa PA7]
Length = 455
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQADLESARCLYCYDAPCVNACPTGIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G S+
Sbjct: 76 QKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYA---LDHAGFSE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ ++ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-EVVLFEARA 173
>gi|148257288|ref|YP_001241873.1| oxidoreductase [Bradyrhizobium sp. BTAi1]
gi|146409461|gb|ABQ37967.1| putative pyridine nucleotide-disulfide oxidoreductase with
alpha-helical ferredoxin [Bradyrhizobium sp. BTAi1]
Length = 455
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ L A A RCL C DAPC +CPT+IDI FI I++ AAK I
Sbjct: 21 ENFKDLV-APLHPNEARVAAERCLFCYDAPCVAACPTEIDIPLFIRQIANGLPVAAAKTI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP--P 137
N +G C VCPT +LC G C ++E + IG LQ+ AT+ G R P
Sbjct: 80 LDANIMGAMCARVCPTENLCEGACVRESSEARAVEIGRLQRHATDALLASGRQLYRAGSP 139
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
K +IA++G GPA LSCA L+R G+ +TIYE
Sbjct: 140 TGK------RIAVVGAGPAGLSCAHALARAGH-QVTIYEAR 173
>gi|452880697|ref|ZP_21957627.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
VRFPA01]
gi|452182915|gb|EME09933.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas aeruginosa
VRFPA01]
Length = 455
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A E++RCL C DAPC +CPT IDI FI SI+ +N GAA
Sbjct: 17 TLAERFADLA-PPLNARQADLESARCLYCYDAPCVNACPTGIDIPGFIRSIAQENVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A G S+
Sbjct: 76 QKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYA---LDHAGFSE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
P + +IA++G GPA LSCA L+ G+ ++ ++E
Sbjct: 131 HPFKRSPATGKRIAVVGAGPAGLSCAHRLAMHGH-EVVLFEARA 173
>gi|404483015|ref|ZP_11018240.1| hypothetical protein HMPREF1135_01300 [Clostridiales bacterium
OBRC5-5]
gi|404344105|gb|EJZ70464.1| hypothetical protein HMPREF1135_01300 [Clostridiales bacterium
OBRC5-5]
Length = 402
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 97/190 (51%), Gaps = 13/190 (6%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
K + R A++EASRCL C DAPC K CP D FI S+ KN GAA+ I +NPL
Sbjct: 13 KSEGFNYRLAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSLRFKNIKGAAETIRENNPL 72
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD 145
G +C VCP +C C+ ++ PI IG +Q++ E + M + +
Sbjct: 73 GGSCAWVCPYDRMCEEECSRCGIDK-PIQIGKIQRYLVEEEQAMSAKFVSAGNK----IG 127
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQG 205
K+ALIG GPASL+CA L+ G D T++EK + G T L P++
Sbjct: 128 KKVALIGAGPASLACARELALAGV-DTTVFEKQ-----AKAGGVLRYGITPTRL--PDRV 179
Query: 206 SFLNIELISE 215
+IELI E
Sbjct: 180 VDFDIELIKE 189
>gi|398966111|ref|ZP_10681367.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM30]
gi|398146508|gb|EJM35250.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM30]
Length = 455
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 90/164 (54%), Gaps = 8/164 (4%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
++ +L +F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 14 SAAALAGHFTDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVP 72
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGIS 132
GAA+ I S N LG +C VCPT LC C +E P+ IG LQ++A +
Sbjct: 73 GAAQKILSANILGGSCARVCPTEILCQQACVRNNVQECAPVLIGLLQRYAVD-----NAH 127
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 128 FTEHPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|398997952|ref|ZP_10700751.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM21]
gi|398122261|gb|EJM11859.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Pseudomonas sp. GM21]
Length = 455
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 92/162 (56%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L +F D+ L++R A EASRCL C DAPC +CP++IDI SFI +I +N GA
Sbjct: 16 AALAGHFTDLA-PPLNDRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQENVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
A+ I S N LG +C VCPT LC C E P+ IG LQ++A + + S+
Sbjct: 75 AQKILSANILGGSCARVCPTEILCQQACVRNNDHECAPVLIGLLQRYAVD---NAHFSE- 130
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ D+ I+E
Sbjct: 131 -HPFPRAASTGKRIAVVGAGPAGLSCAHRSAMHGH-DVVIFE 170
>gi|315924014|ref|ZP_07920241.1| glutamate synthasesmall subunit [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622640|gb|EFV02594.1| glutamate synthasesmall subunit [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 405
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
K R A++EA+RCL C DAPC K CP D FI S+ KN GAA+ I +NPL
Sbjct: 13 KEKAFDYRRAMEEAARCLLCEDAPCSKGCPAGTDPGKFIRSLRFKNVKGAAETIRENNPL 72
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV-FKD-MGISQIRPPDAKVDF 143
G +C MVCP +C C+ ++ PI IG +Q++ E+ +D M + P K
Sbjct: 73 GGSCAMVCPYDRMCEEACSRCGIDK-PIQIGAIQRYLVEMEARDAMRFVKAGKPTGK--- 128
Query: 144 PDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A +G GPASL+CA L+R G +TI+E
Sbjct: 129 ---RVACVGAGPASLACARELARRGV-AVTIFE 157
>gi|402312707|ref|ZP_10831631.1| pyridine nucleotide-disulfide oxidoreductase [Lachnospiraceae
bacterium ICM7]
gi|400369165|gb|EJP22168.1| pyridine nucleotide-disulfide oxidoreductase [Lachnospiraceae
bacterium ICM7]
Length = 402
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
K + R A++EASRCL C DAPC K CP D FI S+ KN GAA+ I +NPL
Sbjct: 13 KSEGFNYRLAMEEASRCLLCEDAPCSKGCPAGTDPAKFIRSLRFKNIKGAAETIRENNPL 72
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS-QIRPPDAKVDFP 144
G +C VCP +C C+ ++ PI IG +Q++ E ++ IS + K+
Sbjct: 73 GGSCAWVCPYDRMCEEECSRCGIDK-PIQIGKIQRYLVE--EEQAISAKFVSAGEKI--- 126
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQ 204
K+ALIG GPASL+CA L+ G D TI+EK + G T L P++
Sbjct: 127 GKKVALIGAGPASLACARELALAGV-DTTIFEKQ-----AKAGGVLRYGITPTRL--PDR 178
Query: 205 GSFLNIELISE 215
+IELI E
Sbjct: 179 VVDFDIELIKE 189
>gi|20807180|ref|NP_622351.1| NADPH-dependent glutamate synthase subunit beta and related
oxidoreductase [Thermoanaerobacter tengcongensis MB4]
gi|20515680|gb|AAM23955.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Thermoanaerobacter tengcongensis MB4]
Length = 466
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFNEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP C C L E P+ IG L++FA + + G IRPP
Sbjct: 81 KETNSLPAICGRVCPQETQCEKNCVLGKVGE-PVAIGRLERFAADWERAKG---IRPPVI 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 137 PKKL-GKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|387905855|ref|YP_006336192.1| Oxidoreductase [Burkholderia sp. KJ006]
gi|387580747|gb|AFJ89461.1| Oxidoreductase [Burkholderia sp. KJ006]
Length = 445
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI SFI I + N GAA I NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAAMDILGANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R PD +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMATGAVRFTRAPDTG-----RHVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTVFD 171
>gi|421473943|ref|ZP_15922010.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderia
multivorans CF2]
gi|400233181|gb|EJO62754.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderia
multivorans CF2]
Length = 445
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVRACPTQIDIPSFIRKIGNGNLKGAAIDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R PD +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMASGAVRFQRAPDTGY-----HVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYEKNT 179
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTLFDARA 174
>gi|326390039|ref|ZP_08211601.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus JW 200]
gi|392939832|ref|ZP_10305476.1| NADPH-dependent glutamate synthase, homotetrameric
[Thermoanaerobacter siderophilus SR4]
gi|325993904|gb|EGD52334.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus JW 200]
gi|392291582|gb|EIW00026.1| NADPH-dependent glutamate synthase, homotetrameric
[Thermoanaerobacter siderophilus SR4]
Length = 466
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFNEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP C C L E P+ IG L++FA + + G IRPP
Sbjct: 81 KETNSLPAICGRVCPQEAQCEKNCVLGKVGE-PVAIGRLERFAADWERTKG---IRPPVI 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 137 PKKL-GKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|395649534|ref|ZP_10437384.1| dihydropyrimidine dehydrogenase subunit A [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 455
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L ++F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N GA
Sbjct: 16 ATLASHFTDLA-PPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTDNVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
A+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + + S+
Sbjct: 75 AQKILSANILGGSCARVCPTEILCQQACVRNNADECAPVLIGLLQRYAID---NAHFSE- 130
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA L+CA + G+ D+ I+E
Sbjct: 131 -HPFQRAAATGKRIAVVGAGPAGLACAHRAALHGH-DVVIFE 170
>gi|254479365|ref|ZP_05092701.1| glutamate synthase (NADPH), homotetrameric [Carboxydibrachium
pacificum DSM 12653]
gi|214034704|gb|EEB75442.1| glutamate synthase (NADPH), homotetrameric [Carboxydibrachium
pacificum DSM 12653]
Length = 466
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFNEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP C C L E P+ IG L++FA + + G IRPP
Sbjct: 81 KETNSLPAICGRVCPQETQCEKNCVLGKVGE-PVAIGRLERFAADWERAKG---IRPPVI 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 137 PKKL-GKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|167036646|ref|YP_001664224.1| glutamate synthase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256752188|ref|ZP_05493053.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus CCSD1]
gi|320115073|ref|YP_004185232.1| glutamate synthase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855480|gb|ABY93888.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256748916|gb|EEU61955.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus CCSD1]
gi|319928164|gb|ADV78849.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 466
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFNEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP C C L E P+ IG L++FA + + G IRPP
Sbjct: 81 KETNSLPAICGRVCPQETQCEKNCVLGKVGE-PVAIGRLERFAADWERAKG---IRPPVI 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 137 PKKL-GKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|323526709|ref|YP_004228862.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. CCGE1001]
gi|323383711|gb|ADX55802.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. CCGE1001]
Length = 449
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVNACPTQIDIPGFIRKIGNGNLKGAAVDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R P+ +A+IG GPA L
Sbjct: 100 EGACVRNHQDAKPVAIGALQRHATDWAMARGEALFSRAPE-----TGRHVAVIGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYEKN 178
+CA L+ G+ ++TIY+ +
Sbjct: 155 ACAHRLALAGH-NVTIYDAH 173
>gi|365899212|ref|ZP_09437129.1| putative pyridine nucleotide-disulphide oxidoreductase with
alpha-helical ferredoxin [Bradyrhizobium sp. STM 3843]
gi|365420013|emb|CCE09671.1| putative pyridine nucleotide-disulphide oxidoreductase with
alpha-helical ferredoxin [Bradyrhizobium sp. STM 3843]
Length = 455
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ L A A RCL C D PC +CPT+IDI FI I++ AAK I
Sbjct: 21 ENFKDLV-APLHPNEARVAAERCLFCYDPPCVAACPTEIDIPLFIRQIANGLPVAAAKTI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR--PP 137
N +G C VCPT +LC G C ++E + IG LQ+ AT+ G R PP
Sbjct: 80 LDANIMGAMCARVCPTENLCEGACVRESSEARAVEIGRLQRHATDALLASGRQLYRAGPP 139
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ ++A++G GPA LSCA L+R G+ +TIYE
Sbjct: 140 TGQ------RVAVVGAGPAGLSCAHALARAGH-QVTIYEAR 173
>gi|331269854|ref|YP_004396346.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium botulinum BKT015925]
gi|329126404|gb|AEB76349.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium botulinum BKT015925]
Length = 405
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 13/164 (7%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA+RCL C DAPC K+CP + + FI S+ +N GA + I +N LG C VCP
Sbjct: 2 AIEEAARCLLCYDAPCSKACPAETNPGKFIRSLRFRNLKGAVETIRENNALGGICSRVCP 61
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
TS C G C+ ++ PI IG LQ + T+ ++ + + P ++ K+A+IG G
Sbjct: 62 TSKYCEGACSRCGIDK-PIQIGKLQTYLTDYESNIKMEVLEP----IECDKEKVAVIGSG 116
Query: 155 PASLSCATFLSRMGYDDITIYEKN-------TYDMVTNVSPRIV 191
P+ L A L++ GY +TI+E TY + +N P+IV
Sbjct: 117 PSGLVAAAELAKKGY-KVTIFEAKDKFGGWLTYGIPSNRLPQIV 159
>gi|170696014|ref|ZP_02887152.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia graminis C4D1M]
gi|170139094|gb|EDT07284.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia graminis C4D1M]
Length = 449
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 41 RCHYCYDAPCVNACPTQIDIPSFIRKIGNGNLKGAAVDILSANPLGGMCARVCPTEILCE 100
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASLS 159
G C + P+ IG LQ+ AT+ G + R P+ +A+IG GPA L+
Sbjct: 101 GACVRNHQDAKPVAIGALQRHATDWAMARGEALFTRAPE-----TGRHVAVIGAGPAGLA 155
Query: 160 CATFLSRMGYDDITIYEKN 178
CA L+ G+ ++TIY+ +
Sbjct: 156 CAHRLALAGH-NVTIYDAH 173
>gi|306842447|ref|ZP_07475098.1| oxidoreductase [Brucella sp. BO2]
gi|306287303|gb|EFM58783.1| oxidoreductase [Brucella sp. BO2]
Length = 498
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
F D+ H LS A+ E+ RC C DAPC +CPT IDI FI I+ N GAA+ I +
Sbjct: 33 FGDL-HPPLSPHEAIVESDRCYFCYDAPCMNACPTGIDIPLFIRQINAGNPAGAARTILA 91
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+N LG C VCPT LC C AE P+ IG LQ++AT DM ++ P +
Sbjct: 92 ENILGGMCARVCPTETLCEEVCVREVAEGKPVKIGHLQRYAT----DMLMATGSHPFTRA 147
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
IA++G GPA +S A L+ G+ +TI+E
Sbjct: 148 AETGRHIAVVGAGPAGISAAHRLAMHGH-QVTIFE 181
>gi|163796767|ref|ZP_02190725.1| hypothetical protein BAL199_13533 [alpha proteobacterium BAL199]
gi|159178021|gb|EDP62568.1| hypothetical protein BAL199_13533 [alpha proteobacterium BAL199]
Length = 453
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L A+ A RC C DAPC +CPT IDI FI I+ N G+AK I
Sbjct: 22 ENFADL-HPPLDRHEAVVAADRCYFCYDAPCVTACPTGIDIPLFIRQIATGNTTGSAKTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG--ISQIRPP 137
F N LG C VCPT LC C AE P+ IG LQ++AT+ G + P
Sbjct: 81 FDQNILGGMCARVCPTETLCEQACVREKAEGKPVVIGRLQRYATDAAMTAGKQFYERAAP 140
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+ +A++G GPA L+CA L+ G+ D+T+++
Sbjct: 141 SGKL------VAVVGAGPAGLACAHRLAMHGH-DVTVFD 172
>gi|385208830|ref|ZP_10035698.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Burkholderia sp. Ch1-1]
gi|385181168|gb|EIF30444.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Burkholderia sp. Ch1-1]
Length = 449
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RC C DAPC +CPTQIDI SFI IS+ N GAA I S NP+G C VCPT LC
Sbjct: 41 RCHYCYDAPCVNACPTQIDIPSFIRKISNGNLKGAAVDILSANPMGGMCARVCPTEILCE 100
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + P+ IG LQ+ AT D +++ + +A++G GPA LSC
Sbjct: 101 GACVRNHQDAKPVAIGALQRHAT----DWAMARGEVLFKRAAETGRHVAVVGAGPAGLSC 156
Query: 161 ATFLSRMGYDDITIYEKN 178
A L+ G+ ++TIY+ +
Sbjct: 157 AHRLALAGH-NVTIYDAH 173
>gi|345018778|ref|YP_004821131.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344034121|gb|AEM79847.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 466
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 23 NFNEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKIIK 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C L E P+ IG L++FA + + G IRPP
Sbjct: 82 ETNSLPAICGRVCPQEAQCEKNCVLGKVGE-PVAIGRLERFAADWERTKG---IRPPVIP 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 138 KKL-GKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|289579328|ref|YP_003477955.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
italicus Ab9]
gi|289529041|gb|ADD03393.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
italicus Ab9]
Length = 466
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFNEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP + C C L E P+ IG L++FA + + G +RPP
Sbjct: 81 KETNSLPAICGRVCPQEEQCEKNCVLGKVGE-PVAIGRLERFAADWERAKG---VRPPVI 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY ++TI+E
Sbjct: 137 PKKL-GKKVAIIGSGPAGLTCAGNLAKLGY-EVTIFE 171
>gi|310825269|ref|YP_003957627.1| glutamate synthase [NADPH] [Stigmatella aurantiaca DW4/3-1]
gi|309398341|gb|ADO75800.1| Glutamate synthase [NADPH] [Stigmatella aurantiaca DW4/3-1]
Length = 448
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 12/164 (7%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA+RCL C+ APC ++CPT ID+ +FI I N GAA+ I S N LG +C VCP
Sbjct: 32 ALAEANRCLYCSGAPCIQACPTGIDVPTFIRKIGTGNLKGAARTILSANLLGQSCAQVCP 91
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPPDAKVDFPDTKIALIG 152
LC G C PI IG LQ++A E + + Q + P K +IAL+G
Sbjct: 92 VEVLCAGSCVYTGWGREPIAIGRLQRYAVETTLSSHPALFQAKQPTGK------RIALVG 145
Query: 153 CGPASLSCATFLSRMGYDDITIYEKNTYDMVTN---VSPRIVKG 193
GPAS++ A L+ G+ + +YE+ N ++P +KG
Sbjct: 146 SGPASIAAAGLLALEGHTCL-LYERKALPGGLNTLGIAPYKLKG 188
>gi|134290940|ref|YP_001114709.1| oxidoreductase [Burkholderia vietnamiensis G4]
gi|134134129|gb|ABO58454.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia vietnamiensis G4]
Length = 445
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI SFI I + N GAA I NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPSFIRKIGNGNLKGAAMDILGANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R PD +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMATGAVRFTRAPDTG-----RHVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTLFD 171
>gi|330810231|ref|YP_004354693.1| glutamate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697878|ref|ZP_17672368.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens Q8r1-96]
gi|327378339|gb|AEA69689.1| putative glutamate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388005130|gb|EIK66397.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas fluorescens Q8r1-96]
Length = 455
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 8/161 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N GAA
Sbjct: 17 TLAARFSDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVQGAA 75
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIR 135
+ I S N LG +C VCPT LC C A+E P+ IG LQ++A + + S+
Sbjct: 76 QKILSANILGGSCARVCPTEVLCQQACVRNNAQECAPVLIGSLQRYAVD---NAHFSE-- 130
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ ++ ++E
Sbjct: 131 HPFQRAAATGKRIAVVGAGPAGLSCAHRSAMHGH-EVVMFE 170
>gi|365902097|ref|ZP_09439920.1| dihydropyrimidine dehydrogenase subunit A [Lactobacillus
malefermentans KCTC 3548]
Length = 409
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC +CP D SFI S+ +N GAA I S+N LG C VCPT
Sbjct: 18 MEEAARCLLCHDAPCSAACPADTDPASFIQSVRFRNLKGAADTIRSNNALGAICARVCPT 77
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C C+ + PI+IGG+Q+F T+ F+ G +I K D +A++G GP
Sbjct: 78 EKYCELACSRSGIDV-PIDIGGIQRFVTD-FEQQGDLKIIE---KGDSNGKSVAIVGSGP 132
Query: 156 ASLSCATFLSRMGYDDITIYEKN 178
L AT L GY + IYEKN
Sbjct: 133 GGLQTATTLLEKGY-AVDIYEKN 154
>gi|378950277|ref|YP_005207765.1| Pyridine nucleotide-disulfide oxidoreductase associated with
reductive pyrimidine catabolism [Pseudomonas fluorescens
F113]
gi|359760291|gb|AEV62370.1| Pyridine nucleotide-disulfide oxidoreductase associated with
reductive pyrimidine catabolism [Pseudomonas fluorescens
F113]
Length = 455
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+L F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N GA
Sbjct: 16 ATLAARFSDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVQGA 74
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQI 134
A+ I S N LG +C VCPT LC C A E P+ IG LQ++A + + S+
Sbjct: 75 AQKILSANILGGSCARVCPTEVLCQQACVRNNAHECAPVLIGSLQRYAVD---NAHFSE- 130
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA LSCA + G+ ++ ++E
Sbjct: 131 -HPFQRATATGKRIAVVGAGPAGLSCAHRSAMHGH-EVVMFE 170
>gi|121535794|ref|ZP_01667595.1| glutamate synthase (NADPH), homotetrameric [Thermosinus
carboxydivorans Nor1]
gi|121305626|gb|EAX46567.1| glutamate synthase (NADPH), homotetrameric [Thermosinus
carboxydivorans Nor1]
Length = 469
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 19/178 (10%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ F +L +DD TT A EASRCL+C APC++ CP I+I
Sbjct: 8 MPEQQPEIRRRNFDEVAL--GYDD---TT-----AKAEASRCLQCKTAPCRQGCPVGINI 57
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI I ++ A I + N L CG VCP D C C + E P+ IG L++
Sbjct: 58 PAFIKHIREGDFTAAIDEIKTKNNLPAICGRVCPQEDQCEKFCVVGKKGE-PVGIGRLER 116
Query: 121 FATEVFKDMGISQ--IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA + + G Q I PP+ P K+A+IG GPA LS A L+RMGY +T++E
Sbjct: 117 FAADYARARGRKQKVILPPE-----PLGKVAVIGAGPAGLSAAGDLARMGY-KVTVFE 168
>gi|297618255|ref|YP_003703414.1| glutamate synthase (NADPH), homotetrameric [Syntrophothermus
lipocalidus DSM 12680]
gi|297146092|gb|ADI02849.1| glutamate synthase (NADPH), homotetrameric [Syntrophothermus
lipocalidus DSM 12680]
Length = 468
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 17/177 (9%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + C NFD++ SE A+ EA+RC++C ++PC + CP +IDI
Sbjct: 15 MPEQEAA------VRC---RNFDEVA-LGYSEETAVAEANRCIQCKNSPCVEGCPVEIDI 64
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI I+ +++ GA K I N L CG VCP + C C L E P+ IG L++
Sbjct: 65 PAFIKMIAARDFAGAIKKIKEKNNLPAICGRVCPQENQCESKCTLGKKHE-PVAIGRLER 123
Query: 121 FATEVFKDMGISQIRPPDAKVDFP-DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F D ++Q P + P ++A+IG GPA L+ A L+ MGY +T++E
Sbjct: 124 FVA----DWEMAQPEPIQVQAINPLGKRVAVIGSGPAGLTAAADLALMGY-KVTVFE 175
>gi|194466722|ref|ZP_03072709.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Lactobacillus reuteri 100-23]
gi|227543868|ref|ZP_03973917.1| possible glutamate synthase (NADPH) [Lactobacillus reuteri CF48-3A]
gi|338202680|ref|YP_004648825.1| glutamate synthase subunit beta [Lactobacillus reuteri SD2112]
gi|194453758|gb|EDX42655.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Lactobacillus reuteri 100-23]
gi|227186129|gb|EEI66200.1| possible glutamate synthase (NADPH) [Lactobacillus reuteri CF48-3A]
gi|336447920|gb|AEI56535.1| glutamate synthase beta subunit [Lactobacillus reuteri SD2112]
Length = 413
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC ++CP + FI S+ +N GAA+ I +N LG C VCPT
Sbjct: 18 MQEAARCLLCHDAPCSQACPAHTNPAKFIRSVLFRNVKGAAETIRENNALGSICARVCPT 77
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD-TKIALIGCG 154
C C A +GPI+IGG+Q++ T++ + M + + K P+ IA+IG G
Sbjct: 78 ERYCEKACT-RAKIDGPIDIGGIQRYVTDMERKMNMKIL-----KAGKPNGMSIAIIGSG 131
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
P+ L AT L GY + IYEK
Sbjct: 132 PSGLQAATTLREKGY-AVDIYEK 153
>gi|304394557|ref|ZP_07376476.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Ahrensia sp. R2A130]
gi|303293218|gb|EFL87599.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Ahrensia sp. R2A130]
Length = 443
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L A E+ RC C DAPC +CPT IDI FI IS N GAAK I N +G C
Sbjct: 25 LDRHEAHVESDRCYFCYDAPCVTACPTSIDIPLFIREISVGNANGAAKTILDANIMGGMC 84
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
VCPT LC C AE P+ IG LQ+FAT+ M + P + ++A
Sbjct: 85 ARVCPTETLCEEVCVREVAEGKPVKIGELQRFATDNL--MATTDAHPFTRAAE-TGKRVA 141
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LSCA L+ G+ D+TI+E
Sbjct: 142 VIGAGPAGLSCAHRLAMHGH-DVTIFE 167
>gi|148544534|ref|YP_001271904.1| oxidoreductase [Lactobacillus reuteri DSM 20016]
gi|184153897|ref|YP_001842238.1| oxidoreductase [Lactobacillus reuteri JCM 1112]
gi|227363038|ref|ZP_03847175.1| oxidoreductase [Lactobacillus reuteri MM2-3]
gi|325682855|ref|ZP_08162371.1| glutamate synthase beta subunit [Lactobacillus reuteri MM4-1A]
gi|148531568|gb|ABQ83567.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Lactobacillus reuteri DSM 20016]
gi|183225241|dbj|BAG25758.1| putative oxidoreductase [Lactobacillus reuteri JCM 1112]
gi|227071922|gb|EEI10208.1| oxidoreductase [Lactobacillus reuteri MM2-3]
gi|324977205|gb|EGC14156.1| glutamate synthase beta subunit [Lactobacillus reuteri MM4-1A]
Length = 413
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC ++CP + FI S+ +N GAA+ I +N LG C VCPT
Sbjct: 18 MQEAARCLLCHDAPCSQACPAHTNPAKFIRSVLFRNVKGAAETIRENNALGSICARVCPT 77
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD-TKIALIGCG 154
C C A +GPI+IGG+Q++ T++ + M + + K P+ IA+IG G
Sbjct: 78 ERYCEKACT-RAKIDGPIDIGGIQRYVTDMERKMNMKIL-----KAGKPNGMSIAIIGSG 131
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
P+ L AT L GY + IYEK
Sbjct: 132 PSGLQAATTLREKGY-AVDIYEK 153
>gi|302390859|ref|YP_003826679.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Acetohalobium
arabaticum DSM 5501]
gi|302202936|gb|ADL11614.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Acetohalobium
arabaticum DSM 5501]
Length = 458
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 8/158 (5%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+NNF ++ E A+KEA RCL+C D+PC CP ++ I FI I+++N+ AA+
Sbjct: 16 INNFQEVACGYTKEE-AVKEAERCLQCKDSPCVDGCPVEVPIPDFIEEITNENFDQAAEL 74
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
+ N L CG VCP ++ C C + + P+ IG L++F D + Q R +
Sbjct: 75 VKEKNALPAICGRVCPQAEQCEAEC-ILGKKGQPVAIGALERFVG----DYELKQDREIE 129
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
AK D D K A++G GPA L+ A ++++GY +T++E
Sbjct: 130 AKTD-KDIKTAVVGSGPAGLTAAADMAKLGY-QVTVFE 165
>gi|254464145|ref|ZP_05077556.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodobacterales bacterium Y4I]
gi|206685053|gb|EDZ45535.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodobacterales bacterium Y4I]
Length = 444
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ + NF D+ H A A RC C DAPC +CPT IDI FI I +
Sbjct: 15 LDAAGIAENFSDL-HPPYDAHEAAVAADRCYFCYDAPCMTACPTSIDIPQFIREIQAGHP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AA+ I N LG C VCPT LC C AE P+ IG LQ++AT+ G+
Sbjct: 74 ESAARTILDQNILGGMCARVCPTETLCEEVCVRETAEGKPVEIGRLQRYATDTLMAKGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNT------------Y 180
P + K+A++G GPA LS A L+ +G+ D+ +Y+ + Y
Sbjct: 134 ----PFTRAAATGKKVAVVGAGPAGLSAAHRLAMLGH-DVVVYDARSKPGGLNEFGIAAY 188
Query: 181 DMVTNVSPRIVK------GTTSRHLYGPEQGSFLNIELISEKTAYQWVYYS 225
N + R V G T YG G L+++ + E AY V+ S
Sbjct: 189 KTTNNFAQREVDWLLQIGGITMD--YGKALGKDLSLDALKE--AYDAVFLS 235
>gi|346642926|ref|YP_259654.2| dihydropyrimidine dehydrogenase subunit A [Pseudomonas protegens
Pf-5]
gi|341580071|gb|AAY91820.2| pyridine nucleotide-disulfide oxidoreductase family protein
[Pseudomonas protegens Pf-5]
Length = 455
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 93/165 (56%), Gaps = 8/165 (4%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ +L ++F D+ L+ R A EASRCL C DAPC +CP++IDI SFI +I N
Sbjct: 13 LDNATLASHFSDLA-PPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTDNV 71
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGI 131
GAA+ I S N LG +C VCPT LC C A+E P+ IG LQ++A +
Sbjct: 72 QGAAQKILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYA---LDNAHF 128
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+Q P + +IA++G GPA LSCA + G+ ++ ++E
Sbjct: 129 TQ--HPFQRAAPTGKRIAVVGAGPAGLSCAHRCALHGH-EVVVFE 170
>gi|121533925|ref|ZP_01665751.1| glutamate synthase (NADPH), homotetrameric [Thermosinus
carboxydivorans Nor1]
gi|121307436|gb|EAX48352.1| glutamate synthase (NADPH), homotetrameric [Thermosinus
carboxydivorans Nor1]
Length = 458
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + V NF ++ +E AL+E+SRCL+C APC+ CP ++DI
Sbjct: 8 MPEQPA---------AERVRNFGEVA-LGYTEEQALRESSRCLQCKAAPCRTGCPVEVDI 57
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI I Y AA I N L CG VCP C C L + P+ IG L++
Sbjct: 58 PAFIALIRQGQYGAAADKIKEKNSLPAICGRVCPQETQCESHCVL-GKKGAPVAIGRLER 116
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA + + G+S PP + ++A++G GPA L+CA L+ GY +T++E
Sbjct: 117 FAADTQRQAGVST--PPALSRN--GRRVAIVGSGPAGLTCAGDLALAGY-AVTVFE 167
>gi|260429293|ref|ZP_05783270.1| protein AegA [Citreicella sp. SE45]
gi|260419916|gb|EEX13169.1| protein AegA [Citreicella sp. SE45]
Length = 444
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
F D+ H L + AL A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 23 GFADL-HPPLDDHEALVAADRCYFCHDAPCATACPTTIDIPLFIRQIATGTPEAAARTIL 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N LG C VCPT LC C AE P+ IG LQ++AT+ + + P +
Sbjct: 82 SQNILGGMCARVCPTETLCEEVCVREVAEGKPVEIGRLQRYATDTLM---AADVHP--FE 136
Query: 141 VDFPDTK-IALIGCGPASLSCATFLSRMGYD 170
D P K IA++G GPA L+CA L+ MG+D
Sbjct: 137 RDAPTGKRIAVVGAGPAGLACAHRLAMMGHD 167
>gi|206900845|ref|YP_002250790.1| glutamate synthase (NADPH), homotetrameric [Dictyoglomus
thermophilum H-6-12]
gi|206739948|gb|ACI19006.1| glutamate synthase (NADPH), homotetrameric [Dictyoglomus
thermophilum H-6-12]
Length = 461
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E AL EASRCL+C DAPC K CP IDI FI I K Y A K
Sbjct: 19 IKNFDEV-ALGYTEEQALIEASRCLQCKDAPCVKGCPVNIDIPGFIRLIKEKKYDEAIKK 77
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L T G VCP C C L E P+ IG L++F + + G PP
Sbjct: 78 IKESNNLPATTGRVCPQETQCEALCTLKKVGE-PVAIGRLERFVADYELNKGYEI--PPI 134
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K D K+A++G GPA L+ A L+RMG ++I+E
Sbjct: 135 VKKY--DKKVAVVGSGPAGLTVAGDLARMGI-KVSIFE 169
>gi|333979354|ref|YP_004517299.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822835|gb|AEG15498.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 469
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 20/178 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MP Q+ + I F +L +D E A+ EA RCL+C PC++ CP ++DI
Sbjct: 14 MPAQAPIERIRNFNEVAL--GYD--------EETAVAEAKRCLQCKKEPCRQGCPVEVDI 63
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI ++ +++ GA K I N L CG VCP + C C L E P+ IG L++
Sbjct: 64 PAFIRLVAERDFAGAIKKIKEKNALPAVCGRVCPQENQCEKYCTLGKKHE-PVGIGRLER 122
Query: 121 FATEVFKDMGI--SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + G+ ++ PP K+A++G GPA L+CA L+++G+ +T++E
Sbjct: 123 FCADWELTRGVLPQEVAPPTG------FKVAVVGSGPAGLTCAADLAKLGH-RVTVFE 173
>gi|374630429|ref|ZP_09702814.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Methanoplanus
limicola DSM 2279]
gi|373908542|gb|EHQ36646.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Methanoplanus
limicola DSM 2279]
Length = 449
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 11/160 (6%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ +F+++ + +SE+ A+ EA RC+ C C K CP IDI +FI +I+ +++ GAA
Sbjct: 10 IADFNEV-NEGISEQNAVLEALRCMDCVRPQCTKGCPVNIDISAFIRAIAEEDFKGAAAI 68
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS--QIRP 136
I DN L CG VCP + C G C L +E P+ IG L++F + ++ G++ +I
Sbjct: 69 IKKDNMLPAICGRVCPQENQCEGLCVL-GKKEKPVRIGALERFVADREREAGMTLPEIMS 127
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P K ++A++G GPA ++ A L+R G+ +T++E
Sbjct: 128 PTGK------RVAVVGSGPAGITAAAELARYGH-SVTVFE 160
>gi|377813146|ref|YP_005042395.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. YI23]
gi|357937950|gb|AET91508.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. YI23]
Length = 444
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI FI I H N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPGFIRKIGHGNLKGAAVDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLS 159
G C + + IG LQ+ AT D +++ P + ++A++G GPA L+
Sbjct: 100 EGSCVRNHPGDEAVKIGALQRHAT----DAAMAKGEPLFKRAPETGRRVAIVGAGPAGLA 155
Query: 160 CATFLSRMGY 169
CA L+ G+
Sbjct: 156 CAYRLALAGH 165
>gi|407798626|ref|ZP_11145533.1| NADPH-dependent glutamate synthase beta subunit [Oceaniovalibus
guishaninsula JLT2003]
gi|407059587|gb|EKE45516.1| NADPH-dependent glutamate synthase beta subunit [Oceaniovalibus
guishaninsula JLT2003]
Length = 447
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D + L AL A RC C DAPC +CPT+IDI FI I+ AAK IF
Sbjct: 23 NFSD-AYPPLDRHEALVAADRCYFCHDAPCVTACPTEIDIPLFIRQIATGTPEAAAKTIF 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT LC C AE P+ IG LQ+ AT+ G+ P +
Sbjct: 82 DQNILGGMCARVCPTETLCEEACVRELAEGKPVRIGALQRHATDTLMARGVH----PFVR 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
++A++G GPA L+CA L+ G+ +T++E
Sbjct: 138 AAPTGRQVAVVGAGPAGLACAHRLALHGH-AVTLFEAR 174
>gi|407714155|ref|YP_006834720.1| glutamate synthase (NADPH/NADH) small subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407236339|gb|AFT86538.1| glutamate synthase (NADPH/NADH) small chain [Burkholderia
phenoliruptrix BR3459a]
Length = 449
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVNACPTQIDIPGFIRKIGNGNLKGAAVDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ A + G + R P+ +A+IG GPA L
Sbjct: 100 EGACVRNHQDAKPVAIGALQRHAADWAMARGEALFSRAPE-----TGRHVAVIGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYEKN 178
+CA L+ G+ ++TIY+ +
Sbjct: 155 ACAHRLALAGH-NVTIYDAH 173
>gi|253681565|ref|ZP_04862362.1| putative glucose inhibited division protein A [Clostridium
botulinum D str. 1873]
gi|253561277|gb|EES90729.1| putative glucose inhibited division protein A [Clostridium
botulinum D str. 1873]
Length = 423
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 25 IKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNP 84
++ T++ A++EA+RCL C DAPC K+CP + FI S+ +N GA + I +N
Sbjct: 10 LERETITPLMAIEEAARCLLCYDAPCSKACPADTNPAKFIRSLRFRNLKGAVETIRENNV 69
Query: 85 LGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFP 144
LG C VCPTS C G C+ ++ PI IG LQ + T+ ++ + + P ++
Sbjct: 70 LGGICSRVCPTSKYCEGACSRCGIDK-PIQIGKLQTYLTDYEFNIKMKVLEP----IECD 124
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKN-------TYDMVTNVSPRIV 191
KIA+IG GP+ L+ L++ GY +TI+E TY + +N P IV
Sbjct: 125 KEKIAVIGSGPSGLAAGAELAKKGY-KVTIFEAKDKFGGWLTYGIPSNRLPEIV 177
>gi|187924667|ref|YP_001896309.1| oxidoreductase [Burkholderia phytofirmans PsJN]
gi|187715861|gb|ACD17085.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia phytofirmans PsJN]
Length = 449
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RC C DAPC +CPTQIDI SFI IS+ N G+A I S NPLG C VCPT LC
Sbjct: 41 RCHYCYDAPCVNACPTQIDIPSFIRKISNGNLKGSAVDILSANPLGGMCSRVCPTEILCE 100
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + P+ IG LQ+ AT D +++ + +A++G GPA L+C
Sbjct: 101 GACVRNHQDAKPVAIGALQRHAT----DWAMARGEVLFKRAAESGRHVAVVGAGPAGLAC 156
Query: 161 ATFLSRMGYDDITIYEKN 178
A L+ G+ ++TIY+ +
Sbjct: 157 AHRLALAGH-NVTIYDAH 173
>gi|221215695|ref|ZP_03588656.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD1]
gi|221164397|gb|EED96882.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD1]
Length = 445
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI SFI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAAIDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ M +R A PDT +A++G GPA
Sbjct: 100 EGACVRNHQDVQPVAIGALQRHATDWA--MASGSVRFQRA----PDTGYHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|84503344|ref|ZP_01001413.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Oceanicola batsensis HTCC2597]
gi|84388254|gb|EAQ01205.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Oceanicola batsensis HTCC2597]
Length = 444
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 1 MPEQSSLAGINV--FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQI 58
M AGI ++ +L NF D+ H L A A RC C DAPC +CPT I
Sbjct: 1 MTHSPRTAGIAAQRLSAEALAQNFADL-HPPLDGHEARVAADRCYFCHDAPCVTACPTSI 59
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
DI FI I+ + AA+ IF N LG C VCPT LC C AE P+ IG L
Sbjct: 60 DIPLFIRQIATETPEAAARTIFDQNILGGMCARVCPTETLCEEACVREIAEGKPVEIGRL 119
Query: 119 QQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
Q+ AT+ +++ P + +IA++G GPA LSCA L+ G+ D+ IY+
Sbjct: 120 QRHATDRL----MARNDHPFERGAPTGKRIAVVGAGPAGLSCAHRLAMKGH-DVVIYD 172
>gi|221202548|ref|ZP_03575577.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD2M]
gi|221207747|ref|ZP_03580754.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD2]
gi|221172244|gb|EEE04684.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD2]
gi|221177585|gb|EEE10003.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans CGD2M]
Length = 445
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPGFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R PD +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMASGAVRFQRAPDTGY-----HVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTLFD 171
>gi|345018282|ref|YP_004820635.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344033625|gb|AEM79351.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 466
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ S+ A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 23 NFNEV-ALGYSKEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKIIK 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C L E P+ IG L++FA + + G IRPP
Sbjct: 82 ETNSLPAICGRVCPQEAQCEKNCVLGKVGE-PVAIGRLERFAADWERTKG---IRPPVIP 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 138 KKL-GKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|417885779|ref|ZP_12529930.1| pyridine nucleotide-disulfide oxidoreductase [Lactobacillus oris
F0423]
gi|341594698|gb|EGS37382.1| pyridine nucleotide-disulfide oxidoreductase [Lactobacillus oris
F0423]
Length = 413
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC ++CP + FI S+ +N GAA+ I +N LG C VCPT
Sbjct: 18 MQEAARCLLCEDAPCSQACPAHTNPAKFIRSVRFRNVKGAAETIRENNALGAICARVCPT 77
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP-PDAKVDFPDTKIALIGCG 154
C C A + PI+IGG+Q++ T++ + + + D +++ +A+IG G
Sbjct: 78 ERYCEKACT-RAKIDHPIDIGGIQRYVTDMERKEKMQILHAGKDNRMN-----VAIIGSG 131
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
PA L AT L + GY + IYEKN
Sbjct: 132 PAGLQAATTLRQKGY-AVDIYEKN 154
>gi|407040682|gb|EKE40265.1| dihydropyrimidine dehydrogenase, putative [Entamoeba nuttalli P19]
Length = 901
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE + EA RCL CA+ C + CPTQ+D K + + N+Y AA+ + NPL L+CG
Sbjct: 34 SESEIVHEARRCLYCAEPNCMRCCPTQLDAKRMVHAAGEHNFYEAARVALTANPLALSCG 93
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
+C + C GCNL G I+I +Q F+ + FK+ +I P V + +A+
Sbjct: 94 HLCSAEECCKAGCNLSKTHAGAIDINAIQAFSLQRFKEY---RIMPTIGNVPVIEKSVAI 150
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IG GPA L+ A+F +R + I ++E+N Y
Sbjct: 151 IGAGPAGLAAASFFARCNFKKIVVFERNAY 180
>gi|413964932|ref|ZP_11404158.1| dihydropyrimidine dehydrogenase subunit A [Burkholderia sp. SJ98]
gi|413927606|gb|EKS66895.1| dihydropyrimidine dehydrogenase subunit A [Burkholderia sp. SJ98]
Length = 444
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPT IDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTSIDIPGFIRKIGNGNLKGAAVDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G++ R P++ +IA++G GPA L
Sbjct: 100 EGSCVRNHQGDEPVKIGALQRHATDWAMARGVALFERAPESG-----RRIAIVGAGPAGL 154
Query: 159 SCATFLSRMGY 169
+CA L+ G+
Sbjct: 155 ACAYRLALAGH 165
>gi|183231113|ref|XP_656317.2| dihydropyrimidine dehydrogenase [Entamoeba histolytica HM-1:IMSS]
gi|169802613|gb|EAL50934.2| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710343|gb|EMD49439.1| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica
KU27]
Length = 901
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE + EA RCL CA+ C + CPTQ+D K + + N+Y AA+ + NPL L+CG
Sbjct: 34 SESEIVHEARRCLYCAEPNCMRCCPTQLDAKRMVHAAGEHNFYEAARVALTANPLALSCG 93
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
+C + C GCNL G I+I +Q F+ + FK+ +I P V + +A+
Sbjct: 94 HLCSAEECCKAGCNLSKTHAGAIDINAIQAFSLQRFKEY---RIMPTIGNVPVIEKSVAI 150
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IG GPA L+ A+F +R + I ++E+N Y
Sbjct: 151 IGAGPAGLAAASFFARCNFKKIVVFERNAY 180
>gi|209515498|ref|ZP_03264363.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia sp. H160]
gi|209503965|gb|EEA03956.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia sp. H160]
Length = 461
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ LS A+ A RC C DAPC +CPT IDI FI I + N GAA+ I
Sbjct: 25 NFADVA-PPLSANAAVIAADRCHYCYDAPCVSACPTGIDIPGFIRKIGNGNLKGAARDIL 83
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD-- 138
S NPLG C VCPT LC G C + P+ IG LQ+ AT+ M P
Sbjct: 84 SANPLGGMCARVCPTEILCEGACVRNHQDGEPVQIGALQRHATDF--QMAREAAGAPALF 141
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------TYDMVTNV 186
+ ++A++G GPA L+CA L+ G+ +++++ Y V +
Sbjct: 142 RRASETGRRVAVVGAGPAGLACAHTLALAGH-RVSVFDAREHPGGLNEYGIAAYKTVDDY 200
Query: 187 SPRIVKGTTSRHLYGPEQGSFL--NIELISEKTAYQWVY 223
+ R V+ S QG L ++ L + AY V+
Sbjct: 201 AQREVRWLLSIGGIELRQGQRLGHDVTLAELRAAYDAVF 239
>gi|409400439|ref|ZP_11250509.1| dihydropyrimidine dehydrogenase subunit A [Acidocella sp. MX-AZ02]
gi|409130567|gb|EKN00323.1| dihydropyrimidine dehydrogenase subunit A [Acidocella sp. MX-AZ02]
Length = 459
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%)
Query: 27 HTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLG 86
H LS A EA+RC C DAPC +CPT IDI FI +I+ N GA + I N LG
Sbjct: 34 HPLLSRDEAAIEAARCYFCYDAPCIAACPTSIDIPGFIRAIATDNLAGAGRKILEANILG 93
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT 146
C VCPT LC G C A + P+ IG LQ+ AT+ + + P +
Sbjct: 94 GACARVCPTEILCEGACVRTAQQHKPVEIGALQRVATDAAMARAAASGQHPFTRAPSTGK 153
Query: 147 KIALIGCGPASLSCATFLSRMGY 169
++A++G GPA L+CA L++ G+
Sbjct: 154 RVAILGAGPAGLACAHELAKQGH 176
>gi|167039310|ref|YP_001662295.1| glutamate synthase [Thermoanaerobacter sp. X514]
gi|300913950|ref|ZP_07131267.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X561]
gi|307725365|ref|YP_003905116.1| glutamate synthase [Thermoanaerobacter sp. X513]
gi|166853550|gb|ABY91959.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X514]
gi|300890635|gb|EFK85780.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X561]
gi|307582426|gb|ADN55825.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X513]
Length = 466
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF ++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFSEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP + C C L E P+ IG L++FA + + GI P
Sbjct: 81 KETNSLPAICGRVCPQEEQCEKNCVLGKVGE-PVAIGRLERFAADWERAKGIR----PSV 135
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 136 IPKKLGKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|421470989|ref|ZP_15919320.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderia
multivorans ATCC BAA-247]
gi|400226510|gb|EJO56584.1| pyridine nucleotide-disulfide oxidoreductase [Burkholderia
multivorans ATCC BAA-247]
Length = 445
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 77/139 (55%), Gaps = 9/139 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPGFIRKIGNGNLKGAAIDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G + + PDT +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMASGAVRFQ------RVPDTGYHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYE 176
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFD 171
>gi|297545479|ref|YP_003677781.1| glutamate synthase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296843254|gb|ADH61770.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 466
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF ++ SE A+ EA RCL+C C + CP Q+ I FI I+ +++ GA K I
Sbjct: 22 RNFSEV-ALGYSEEEAVSEAQRCLQCKKPGCVEGCPVQVQIPQFIKRIAERDFEGAIKII 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP + C C L E P+ IG L++FA + + GI P
Sbjct: 81 KETNSLPAICGRVCPQEEQCEKNCVLGKVGE-PVAIGRLERFAADWERAKGIR----PSV 135
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 136 IPKKLGKKVAIIGSGPAGLTCAGDLAKLGY-DVTIFE 171
>gi|259502156|ref|ZP_05745058.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259169774|gb|EEW54269.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 416
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC ++CP + FI S+ +N GAA+ I +N LG C VCPT
Sbjct: 21 MQEAARCLLCEDAPCSQACPAHTNPAKFIRSVRFRNVKGAAETIRENNALGAICARVCPT 80
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPDAKVDFPDTKIALIGC 153
C C A +GPI+I G+Q++ T++ + +M I P+ +A+IG
Sbjct: 81 ERYCESACT-RAKIDGPIDIAGIQRYVTDMERKENMQILHAGKPNG------LSVAIIGS 133
Query: 154 GPASLSCATFLSRMGYDDITIYEK 177
GPA L AT L + GY + IYEK
Sbjct: 134 GPAGLQAATTLLQKGY-AVDIYEK 156
>gi|91784372|ref|YP_559578.1| oxidoreductase [Burkholderia xenovorans LB400]
gi|91688326|gb|ABE31526.1| FAD-dependent pyridine nucleotide- disulphide oxidoreductase
[Burkholderia xenovorans LB400]
Length = 449
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RC C DAPC +CPTQIDI SFI IS+ N GAA I S NP+G C VCPT LC
Sbjct: 41 RCHYCYDAPCVNACPTQIDIPSFIRKISNGNLKGAAVDILSANPMGGMCARVCPTEILCE 100
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + P+ IG LQ+ AT D +++ + +A++G GPA L+C
Sbjct: 101 GACVRNHQDAKPVAIGALQRHAT----DWAMARGEVLFKRAAETGRHVAVVGAGPAGLAC 156
Query: 161 ATFLSRMGYDDITIYEKN 178
A L+ G+ +TIY+ +
Sbjct: 157 AHRLALAGH-TVTIYDAH 173
>gi|167628421|ref|YP_001678920.1| glutamate synthase (nadph), homotetrameric [Heliobacterium
modesticaldum Ice1]
gi|167591161|gb|ABZ82909.1| glutamate synthase (nadph), homotetrameric [Heliobacterium
modesticaldum Ice1]
Length = 469
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ SE A+KEA+RC++C C++ CP ++ I FI +++ +++ GAA +
Sbjct: 22 NFDEV-ALGYSEEQAVKEAARCIQCKKPRCREGCPVEVLIPDFIKAVAARDFAGAAVKLK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C L E P+ IG L++F + G S P AK
Sbjct: 81 EKNALPAICGRVCPQESQCEEKCILGIKSE-PVAIGRLERFVADWEMAQGASATEPAPAK 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY +T++E
Sbjct: 140 ----GAKVAVIGAGPAGLTCAAELAKLGY-AVTVFE 170
>gi|28210532|ref|NP_781476.1| NADPH-dependent glutamate synthase beta chain [Clostridium tetani
E88]
gi|28202969|gb|AAO35413.1| putative NADPH-dependent glutamate synthase beta chain [Clostridium
tetani E88]
Length = 423
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 6/158 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NN+ T + A++EASRCL C DAPC K+CP FI S+ KN GAA+ I
Sbjct: 4 NNYSKEVKKTYTPLLAIEEASRCLLCYDAPCSKNCPVDTKPDEFIRSLRFKNLKGAAETI 63
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+N LG C +CP C C ++ PI+IG LQ++ E K++ + +
Sbjct: 64 RKNNILGGVCSRLCPYDKYCQKNCTRGKIDK-PIDIGSLQRYLIEFEKNIRLDTLN---- 118
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK 177
KV+ K+A+IG GP LS A L++ GY + I+EK
Sbjct: 119 KVEINKEKVAIIGSGPGGLSAAASLAQKGY-KVNIFEK 155
>gi|407785091|ref|ZP_11132239.1| oxidoreductase [Celeribacter baekdonensis B30]
gi|407203123|gb|EKE73110.1| oxidoreductase [Celeribacter baekdonensis B30]
Length = 445
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
S F D+ H L AL + RC C DAPC +CPT ID+ FI I+ AA
Sbjct: 19 SYTAQFSDL-HPVLDHHEALVASDRCYFCHDAPCMTACPTSIDVPLFIRQIATGTPEAAA 77
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ IF N LG C VCPT LC C AE P+ IG LQ++AT+ +++
Sbjct: 78 RTIFEQNILGGMCARVCPTETLCEEACVREKAEGKPVEIGRLQRYATDTL----MAKNAH 133
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYD 170
P A+ + +A++G GPA LS A L+ G+D
Sbjct: 134 PFARAEATGKTVAVVGAGPAGLSAAHRLAMKGHD 167
>gi|389852413|ref|YP_006354647.1| glutamate synthase (NADPH/NADH) small chain [Pyrococcus sp. ST04]
gi|388249719|gb|AFK22572.1| putative glutamate synthase (NADPH/NADH) small chain [Pyrococcus
sp. ST04]
Length = 469
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
A+KEA RCL+C+ APC K CP I+I +FI I + GA + I+ DN L G V
Sbjct: 35 AIKEAERCLQCSPEYAPCIKGCPVHINIPAFIAKIKEGDIKGALRIIWKDNTLPAITGRV 94
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFPDTKIAL 150
CP D C G C + + P+NIG L++F + ++ GI + + + D K+A+
Sbjct: 95 CPQEDQCEGVCVVGKVGD-PVNIGKLERFVADYARERGIDEELLCELAKECDGSRGKVAV 153
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
+G GPA L+CA L++MGY +TI+E
Sbjct: 154 VGAGPAGLTCAGELAKMGY-KVTIFE 178
>gi|161522383|ref|YP_001585312.1| oxidoreductase [Burkholderia multivorans ATCC 17616]
gi|189348741|ref|YP_001941937.1| putative oxidoreductase [Burkholderia multivorans ATCC 17616]
gi|160345936|gb|ABX19020.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia multivorans ATCC 17616]
gi|189338879|dbj|BAG47947.1| NADPH-dependent glutamate synthase small chain [Burkholderia
multivorans ATCC 17616]
Length = 445
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVHACPTQIDIPGFIRKIGNGNLKGAAIDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R PD +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMASGAVRFQRAPDTGY-----HVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTLFD 171
>gi|119356326|ref|YP_910970.1| putative oxidoreductase [Chlorobium phaeobacteroides DSM 266]
gi|119353675|gb|ABL64546.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Chlorobium
phaeobacteroides DSM 266]
Length = 482
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF ++ E + EA RC++C D C CP I I FI ++ ++ GAAK
Sbjct: 28 VTNFREVNLGYTPELARM-EALRCIQCKDPVCIAGCPVNIKIDQFIKMVADGDFLGAAKK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIR 135
I DN L CG VCP D C C + E P+ IG L++F + + G I +++
Sbjct: 87 IKEDNVLPAICGRVCPQEDQCEKVCVIGKKHE-PVAIGHLERFVADYERQTGHVEIPEVK 145
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
PP K KIA+IG GPA LSCA L R+G+ +I ++E
Sbjct: 146 PPTGK------KIAIIGSGPAGLSCANDLVRLGH-EIVVFE 179
>gi|332798382|ref|YP_004459881.1| glutamate synthase (NADPH), homotetrameric [Tepidanaerobacter
acetatoxydans Re1]
gi|438001322|ref|YP_007271065.1| Glutamate synthase [NADPH] small chain [Tepidanaerobacter
acetatoxydans Re1]
gi|332696117|gb|AEE90574.1| glutamate synthase (NADPH), homotetrameric [Tepidanaerobacter
acetatoxydans Re1]
gi|432178116|emb|CCP25089.1| Glutamate synthase [NADPH] small chain [Tepidanaerobacter
acetatoxydans Re1]
Length = 464
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ +E A+ EA RCL C C + CP Q+ I FI I+ KN+ A I
Sbjct: 23 KNFNEV-ALGYTEEDAINEAQRCLNCKKPSCMEGCPVQVQIPRFIKHIAEKNFESAISVI 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP + C C L A P+ IG L++FA + + G ++ PD
Sbjct: 82 KETNSLPAVCGRVCPQEEQCEQKCVL-AKRGDPVGIGRLERFAADWERQQG---VKIPD- 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + K+A+IG GPA L+CA L+++GY D+T++E
Sbjct: 137 RANPIGKKVAIIGSGPAGLTCAGDLAKLGY-DVTVFE 172
>gi|145220282|ref|YP_001130991.1| putative oxidoreductase [Chlorobium phaeovibrioides DSM 265]
gi|145206446|gb|ABP37489.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Chlorobium
phaeovibrioides DSM 265]
Length = 483
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEA RC++C D C K CP I I FI ++ ++ GAAK I DN L CG VCP
Sbjct: 43 AMKEALRCIQCKDPVCIKGCPVNIKIDQFILKVAEGDFLGAAKKIKEDNVLPAVCGRVCP 102
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
D C C + E P+ IG L++F + ++ G ++ P A K A+IG G
Sbjct: 103 QEDQCEKECIIGRKHE-PVAIGNLERFVADWEREHGTMELPPIKAAT---GKKAAVIGSG 158
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LSCA L R G+ ++ ++E
Sbjct: 159 PAGLSCANDLVRHGH-EVVVFE 179
>gi|328951895|ref|YP_004369229.1| glutamate synthase (NADPH), homotetrameric [Desulfobacca
acetoxidans DSM 11109]
gi|328452219|gb|AEB08048.1| glutamate synthase (NADPH), homotetrameric [Desulfobacca
acetoxidans DSM 11109]
Length = 474
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NFD++ E+ A+KEASRC++C D C++ CP ++DI +FI I ++ GA + +
Sbjct: 31 HNFDEVPLGYTPEQ-AMKEASRCIQCKDPRCRQGCPVEVDIPAFIKCIKEGDFEGAIRKL 89
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ N L CG VCP C G C L ++ P+ IG L++FA + ++ G + PP A
Sbjct: 90 WEKNALPAVCGRVCPQEVQCEGLCVL-GKKDQPVAIGNLEKFAADYQRNHG-RDVLPPKA 147
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A++G GP+ L+ A L G+ D+TI+E
Sbjct: 148 APT--GKKVAVVGSGPSGLTVAGDLILKGH-DVTIFE 181
>gi|358068376|ref|ZP_09154840.1| hypothetical protein HMPREF9333_01721 [Johnsonella ignava ATCC
51276]
gi|356693424|gb|EHI55101.1| hypothetical protein HMPREF9333_01721 [Johnsonella ignava ATCC
51276]
Length = 415
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 79/156 (50%), Gaps = 18/156 (11%)
Query: 27 HTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLG 86
T + R A++EASRCL C DAPC + CP + FI S+ KN GAA+ I +NPLG
Sbjct: 14 ETGFNYRTAMEEASRCLLCEDAPCSRDCPASTNPAKFIRSLRFKNIKGAAETIRENNPLG 73
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT 146
C +CP LC C+ + PI IG LQ+F E K+DF
Sbjct: 74 GCCAWICPYDRLCEKACSRVGIDR-PIKIGSLQRFLIE----------EEERGKMDFIKA 122
Query: 147 ------KIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A IG GPASLSCA L+ G + IYE
Sbjct: 123 KPLCGKKVACIGSGPASLSCARQLAAEGV-SVEIYE 157
>gi|259502931|ref|ZP_05745833.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259169124|gb|EEW53619.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 413
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC ++CP + FI S+ +N GAA+ I +N LG C VCPT
Sbjct: 18 MQEAARCLLCEDAPCSQACPAHTNPAKFIRSVRFRNVKGAAETIRENNALGAICARVCPT 77
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C C A + PI+IGG+Q++ T++ + + + +A+IG GP
Sbjct: 78 ERYCEKACT-RAKIDHPIDIGGIQRYVTDMERKEKMQILHAGKDN----GMNVAIIGSGP 132
Query: 156 ASLSCATFLSRMGYDDITIYEKN 178
A L AT L + GY + IYEKN
Sbjct: 133 AGLQAATTLRQKGY-AVDIYEKN 154
>gi|194333280|ref|YP_002015140.1| oxidoreductase [Prosthecochloris aestuarii DSM 271]
gi|194311098|gb|ACF45493.1| glutamate synthase (NADPH), homotetrameric [Prosthecochloris
aestuarii DSM 271]
Length = 482
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 12/160 (7%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF ++ + S A+KEA RC++C D C K CP I I FI ++ ++ GAA+ I
Sbjct: 29 QNFKEV-NLGYSPEAAIKEAMRCIQCKDPVCIKGCPVNIKIDEFIHLVAEGDFLGAARKI 87
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRP 136
DN L CG VCP D C C L + P+ IG L++F + ++ G ++RP
Sbjct: 88 KEDNVLPAICGRVCPQEDQCEKECVL-GNKHKPVAIGHLERFVADYERESGNIKTPEVRP 146
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K KIA+IG GPA LSCA L+++G+ + ++E
Sbjct: 147 ATGK------KIAVIGSGPAGLSCANDLAQLGH-SVVVFE 179
>gi|217967455|ref|YP_002352961.1| glutamate synthase [Dictyoglomus turgidum DSM 6724]
gi|217336554|gb|ACK42347.1| glutamate synthase (NADPH), homotetrameric [Dictyoglomus turgidum
DSM 6724]
Length = 461
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NFD++ +E AL EASRCL+C DAPC + CP IDI FI I K Y A K
Sbjct: 19 VRNFDEV-ALGYTEEQALMEASRCLQCKDAPCVRGCPVNIDIPGFIRLIKEKKYDEAIKK 77
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFK--DMGISQI 134
I +N L T G VCP C C L E P+ IG L++F E+ K D+ + ++
Sbjct: 78 IKENNNLPATTGRVCPQETQCEALCTLKKIGE-PVAIGRLERFVADYELSKGYDIPLIKV 136
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
R D ++A++G GPA L+ A L+RMG ++I+E
Sbjct: 137 R--------RDKRVAVVGSGPAGLTVAGDLARMGI-KVSIFE 169
>gi|229037742|ref|ZP_04189577.1| Glutamate synthase, small subunit [Bacillus cereus AH1271]
gi|228727596|gb|EEL78737.1| Glutamate synthase, small subunit [Bacillus cereus AH1271]
Length = 153
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 22 FDDIKHT------TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
+DIKH L+ + ++EA+RCL C DAPC K+CPT IDI SFI I+ N G+
Sbjct: 11 IEDIKHNFLEVKPDLTFKEVIEEANRCLYCYDAPCIKACPTSIDIPSFIKKITTDNLKGS 70
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT 123
A+ IF NP+G TC VCPT +LC G C L A + PI IG LQ+ T
Sbjct: 71 ARVIFEANPVGATCARVCPTEELCEGACVLNEASQ-PIKIGDLQRHVT 117
>gi|312868698|ref|ZP_07728891.1| pyridine nucleotide-disulfide oxidoreductase [Lactobacillus oris
PB013-T2-3]
gi|311095812|gb|EFQ54063.1| pyridine nucleotide-disulfide oxidoreductase [Lactobacillus oris
PB013-T2-3]
Length = 413
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 36 LKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
++EA+RCL C DAPC ++CP + FI S+ +N GAA+ I +N LG C VCPT
Sbjct: 18 MQEAARCLLCEDAPCSQACPAHTNPAKFIRSVRFRNVKGAAETIRENNALGAICARVCPT 77
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C C A + PI+IGG+Q++ T++ + + + +A+IG GP
Sbjct: 78 ERYCEKACT-RAKIDHPIDIGGIQRYVTDMERKEKMQILHAGKDN----GMSVAIIGSGP 132
Query: 156 ASLSCATFLSRMGYDDITIYEKN 178
A L AT L + GY + IYEKN
Sbjct: 133 AGLQAATTLRQKGY-AVDIYEKN 154
>gi|194335642|ref|YP_002017436.1| oxidoreductase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308119|gb|ACF42819.1| glutamate synthase (NADPH), homotetrameric [Pelodictyon
phaeoclathratiforme BU-1]
Length = 477
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 12/160 (7%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF ++ E+ A +EA RC++C D C K CP I I FI I+ N+ GAA+ I
Sbjct: 29 HNFQEVNLGYTIEQ-AQREAQRCIQCKDPVCIKGCPVNIKIDQFIKLIADGNFLGAARKI 87
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRP 136
DN L CG VCP D C C L A + P+ IG L++FA + ++ G + ++P
Sbjct: 88 KEDNVLPAICGRVCPQEDQCEKTCVL-AKKYTPVAIGNLERFAADYERENGSVELPTVQP 146
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA LSCA L ++G+ +T++E
Sbjct: 147 ATGK------KVAVIGSGPAGLSCANDLVQLGH-AVTVFE 179
>gi|83951609|ref|ZP_00960341.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseovarius nubinhibens ISM]
gi|83836615|gb|EAP75912.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Roseovarius nubinhibens ISM]
Length = 444
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H L A+ A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 22 ENFTDL-HAPLDPHEAVVAADRCYFCHDAPCMTACPTSIDIPLFIRQIATGTPEAAAETI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N LG C VCPT LC C AE P+ IG LQ++AT+ I P
Sbjct: 81 LDQNILGGMCARVCPTETLCEEVCVREVAEGKPVEIGRLQRYATDTVMARNIH----PFT 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++A++G GPA L+CA L+ G+ ++T+Y+
Sbjct: 137 RAEATGRRVAVVGAGPAGLACAHRLALHGH-EVTLYD 172
>gi|85860214|ref|YP_462416.1| glutamate synthase (NADPH) [Syntrophus aciditrophicus SB]
gi|85723305|gb|ABC78248.1| glutamate synthase (NADPH) [Syntrophus aciditrophicus SB]
Length = 471
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 12/161 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++N++++ SE A+KEASRCL+C C+ CP +DI +F+ I+ + AA
Sbjct: 27 IHNYNEVPFG-YSEETAMKEASRCLQCKKPACRTGCPVGVDIPAFVKLIAEGKFIEAAWK 85
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIR 135
+ D+ L CG VCP D C C + +E P+ IG L++FA + ++ G I ++
Sbjct: 86 LKEDSALPAVCGRVCPQEDQCEKFCIVGKKDE-PVAIGRLERFAADYERNKGEVKIPELA 144
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + K K+A++G GPA L+ A L ++GY D+TIYE
Sbjct: 145 PKNGK------KVAVVGAGPAGLTVAGDLIKLGY-DVTIYE 178
>gi|346992376|ref|ZP_08860448.1| putative oxidoreductase [Ruegeria sp. TW15]
Length = 444
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S L +NF D+ H L+ A A RC C DAPC +CPT IDI FI I
Sbjct: 15 LSSDELTSNFTDL-HPPLAPHEAAVAADRCYFCYDAPCVTACPTDIDIPLFIRQIQAGQP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
A + I N LG C VCPT LC C AE P+ IG LQ++AT+ D+ S
Sbjct: 74 QAAGQTILEQNILGGMCARVCPTETLCEEACVRETAEGKPVEIGRLQRYATD---DVMAS 130
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + T +A++G GPA L+CA L+ +G+ D+ I+E
Sbjct: 131 GAHPFERATSTGKT-VAVVGAGPAGLACAHRLAMLGH-DVVIHE 172
>gi|319937711|ref|ZP_08012114.1| hypothetical protein HMPREF9488_02950 [Coprobacillus sp. 29_1]
gi|319807146|gb|EFW03760.1| hypothetical protein HMPREF9488_02950 [Coprobacillus sp. 29_1]
Length = 464
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E+ A++EA+RCL C PC++ CP + I FI+ ++ N+ A I
Sbjct: 22 NFDEVSLGYTKEQ-AMEEATRCLNCRHQPCKQGCPVGVPIPEFISEVAKGNFEEAYAIIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+N L CG VCP + C G C + A + + IG L++F + +D G + + K
Sbjct: 81 KENALPAICGRVCPQENQCEGKC-VRAIKGESVGIGRLERFVADYHRDHG----QKTNIK 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A++G GPA ++CA L++ GY D+T++E
Sbjct: 136 IEKNGKKVAVVGSGPAGITCAGELAKRGY-DVTVFE 170
>gi|354595572|ref|ZP_09013589.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Brenneria sp. EniD312]
gi|353673507|gb|EHD19540.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Brenneria sp. EniD312]
Length = 467
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 8 AGINV--FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFIT 65
AGI + +NF D L + A+ EA RC C DAPC +SCP ID+ SFI
Sbjct: 12 AGIQAGRLSEAQYADNFSD-SVAPLGKIQAVIEAERCYYCYDAPCTRSCPADIDVPSFIH 70
Query: 66 SISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV 125
I+ N GAA+AI S+N LG C VCPT LC C + P+ IG LQ++AT+
Sbjct: 71 RIAQDNVRGAAQAILSENVLGGMCARVCPTETLCEQACVRNQQDGRPVRIGLLQRYATDA 130
Query: 126 FKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGY 169
+ + P ++ K+A++G GPA L+ A L+ G+
Sbjct: 131 YLS---NPGTPLFSRATSSGKKVAVVGAGPAGLTAAHRLACHGH 171
>gi|357038617|ref|ZP_09100414.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
gibsoniae DSM 7213]
gi|355359409|gb|EHG07171.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
gibsoniae DSM 7213]
Length = 470
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 20/178 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MP Q +L NF+++ SE + EA RCL+C + PC++ CP ++DI
Sbjct: 17 MPTQDAL---------ERARNFNEV-ALGYSEETVIAEAQRCLQCKNEPCRQGCPVEVDI 66
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI + ++ GA K I N L CG VCP + C C L E + IG +++
Sbjct: 67 PAFIKLAAEGDFDGAIKKIKEKNALPAVCGRVCPQENQCEKYCTLAKKHEA-VGIGRIER 125
Query: 121 FAT--EVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F E+ K + + ++ PP K K+A++G GP+ L+CA+ L+++G+ ++TI+E
Sbjct: 126 FCADRELQKGVTLPEVAPPTGK------KVAVVGSGPSGLTCASDLAKLGH-EVTIFE 176
>gi|189467870|ref|ZP_03016655.1| hypothetical protein BACINT_04262 [Bacteroides intestinalis DSM
17393]
gi|189436134|gb|EDV05119.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
intestinalis DSM 17393]
Length = 768
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I AAK + + L C
Sbjct: 336 LTEEQALTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEILEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C +E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMKEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|254510919|ref|ZP_05122986.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Rhodobacteraceae bacterium KLH11]
gi|221534630|gb|EEE37618.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Rhodobacteraceae bacterium KLH11]
Length = 444
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S L +NF D+ H L+ A A RC C DAPC +CPT IDI F+ I
Sbjct: 15 LSSDELTSNFTDL-HPPLAPHEAAVAADRCYFCYDAPCVTACPTDIDIPLFMRQIQAGQP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
A + I N LG C VCPT LC C AE P+ IG LQ+FAT+ G
Sbjct: 74 KAAGQTILEQNILGGMCARVCPTETLCEEACVRETAEGKPVEIGRLQRFATDDVMASG-- 131
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +A++G GPA L+CA L+ +G+ D+ I+E
Sbjct: 132 --EHPFERASSTGKTVAVVGAGPAGLACAHRLAMLGH-DVVIHE 172
>gi|344166976|emb|CCA79166.1| putative oxidoreductase (yeiT) [blood disease bacterium R229]
Length = 448
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPGFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G + + P T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMAKGAALFKRA------PQTGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYEKNT 179
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFDARA 174
>gi|423221783|ref|ZP_17208253.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
cellulosilyticus CL02T12C19]
gi|392645647|gb|EIY39371.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
cellulosilyticus CL02T12C19]
Length = 768
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I AAK + + L C
Sbjct: 336 LTEEQALTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEILEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C +E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMKEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|315229830|ref|YP_004070266.1| glutamate synthase small chain [Thermococcus barophilus MP]
gi|315182858|gb|ADT83043.1| glutamate synthase small chain [Thermococcus barophilus MP]
Length = 470
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 85/150 (56%), Gaps = 14/150 (9%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
A KEA RCL+C + APC K CP I+I +FI I + GA + I++ N L G V
Sbjct: 37 AKKEAERCLQCPEKYAPCIKGCPVNINIPAFIAKIKEGDIRGALEVIWACNSLPAITGRV 96
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGI------SQIRPPDAKVDFPDT 146
CP D C G C + + PINIG L++F + ++ GI QI+ +
Sbjct: 97 CPQEDQCEGVCVMGKVGD-PINIGKLERFVADYAREKGIDAELLGEQIK----GIKKNGR 151
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++MGY D+TI+E
Sbjct: 152 KVAVIGAGPAGLTCAAELAKMGY-DVTIFE 180
>gi|224538464|ref|ZP_03679003.1| hypothetical protein BACCELL_03358 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519932|gb|EEF89037.1| hypothetical protein BACCELL_03358 [Bacteroides cellulosilyticus
DSM 14838]
Length = 768
Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I AAK + + L C
Sbjct: 336 LTEEQALTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEILEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C +E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMKEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|344171668|emb|CCA84288.1| putative oxidoreductase (yeiT) [Ralstonia syzygii R24]
Length = 448
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPGFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPAS 157
G C + P+ IG LQ+ AT+ G + + P T +A++G GPA
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMAKGAALFKRA------PQTGRHVAVVGAGPAG 153
Query: 158 LSCATFLSRMGYDDITIYEKNT 179
L+CA L+ G+ +T+++
Sbjct: 154 LACAHRLALAGH-RVTLFDARA 174
>gi|260438346|ref|ZP_05792162.1| glutamate synthase [Butyrivibrio crossotus DSM 2876]
gi|292808932|gb|EFF68137.1| glutamate synthase [Butyrivibrio crossotus DSM 2876]
Length = 461
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A+ EASRCL C +A C K CP I+I +FI + N+ A + I
Sbjct: 21 NFEEV-CLGYNEEEAMAEASRCLNCKNAMCVKGCPVSINIPAFIHEVKEGNFAEAYRIIS 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + I IG L++F + ++ GIS P+A
Sbjct: 80 ESSALPAVCGRVCPQETQCEGKC-IRGIKGEAIAIGKLERFVADWARENGIS----PEAP 134
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GP+ L+CA L++MGY D+TI+E
Sbjct: 135 KEKKGKKVAVIGSGPSGLTCAGDLAKMGY-DVTIFE 169
>gi|300691786|ref|YP_003752781.1| oxidoreductase (yeiT) [Ralstonia solanacearum PSI07]
gi|299078846|emb|CBJ51507.1| putative oxidoreductase (yeiT) [Ralstonia solanacearum PSI07]
Length = 448
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 40 SRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLC 99
SRC C DAPC ++CPTQIDI FI I + N GAA I S NPLG C VCPT LC
Sbjct: 40 SRCHYCYDAPCVQACPTQIDIPGFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILC 99
Query: 100 MGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASL 158
G C + P+ IG LQ+ AT+ G + R P +A++G GPA L
Sbjct: 100 EGACVRNHQDAQPVAIGALQRHATDWAMAKGAALFKRAPQ-----TGRHVAVVGAGPAGL 154
Query: 159 SCATFLSRMGYDDITIYEKNT 179
+CA L+ G+ +T+++
Sbjct: 155 ACAHRLALAGH-RVTLFDARA 174
>gi|355572369|ref|ZP_09043513.1| glutamate synthase (NADPH), homotetrameric [Methanolinea tarda
NOBI-1]
gi|354824743|gb|EHF08985.1| glutamate synthase (NADPH), homotetrameric [Methanolinea tarda
NOBI-1]
Length = 447
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V +F ++ T LS A+ EA RCL+C C K CP +IDI +FI I+ ++ GAA+
Sbjct: 10 VRDFSEVD-TGLSAEEAVAEAQRCLQCKKPSCVKGCPVEIDIPAFIARIAEGDFAGAAQV 68
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I +N L CG VCP C G C + +E P+ IG L++F + + G S++ P
Sbjct: 69 IKENNLLPAICGRVCPQEVQCEGQC-ILGLKEVPVRIGELERFVADHERKTG-SRLPP-- 124
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A++G GPA L+ A L+R+G+ + ++E
Sbjct: 125 -KAEPTGKKVAVVGSGPAGLTAAAELARLGH-SVVLFE 160
>gi|20807067|ref|NP_622238.1| NADPH-dependent glutamate synthase subunit beta and related
oxidoreductase [Thermoanaerobacter tengcongensis MB4]
gi|20515556|gb|AAM23842.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Thermoanaerobacter tengcongensis MB4]
Length = 464
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A+ EASRCL+C + C CP + I FI +I+ + + A K
Sbjct: 18 IKNFDEV-ALGYTEEEAILEASRCLQCPNPTCVAGCPVHVRIPEFIKAITERKFEEAYKI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I S N L CG VCP + C C L + PI IG L++F + I + P+
Sbjct: 77 ITSTNSLPAVCGRVCPQEEQCEKNCILNRIGK-PIAIGRLERFVADYALQNNIEEEVKPE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 136 KK----NKKVAIIGSGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|329957011|ref|ZP_08297579.1| glutamate synthase [Bacteroides clarus YIT 12056]
gi|328523768|gb|EGF50860.1| glutamate synthase [Bacteroides clarus YIT 12056]
Length = 768
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E+ AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 336 LTEKQALTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|312126734|ref|YP_003991608.1| glutamate synthase (nadph), homotetrameric [Caldicellulosiruptor
hydrothermalis 108]
gi|311776753|gb|ADQ06239.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
hydrothermalis 108]
Length = 459
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
VNNFD++ S+ A++EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 18 VNNFDEVCLGYSSDE-AVQEALRCLECKNAPCIKGCPVEVKIPEFIRLIKEKKFKESYLK 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++F + F+ + P+
Sbjct: 77 ILETNLLPAICGRVCPQETQCEKNC-VRGIKGEPIAIGKLERFVADWFRQNCEFEFEKPE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA LSCA+ L+++GY ++ I+E
Sbjct: 136 SN----GKKVAIIGSGPAGLSCASSLAKLGY-EVVIFE 168
>gi|374854885|dbj|BAL57756.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[uncultured candidate division OP1 bacterium]
gi|374856230|dbj|BAL59084.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[uncultured candidate division OP1 bacterium]
Length = 445
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 27 HTTLSERGALKEASRCLKC----ADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSD 82
H L E A+ EA RCL+C A APC +CP Q+ + FI +I AA+ IF
Sbjct: 20 HPPLDEMTAVVEADRCLECGGPYAPAPCTAACPAQVPVPQFIRAIRDGRPDEAARLIFEA 79
Query: 83 NPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVD 142
N LG +C VCP +LC G C L ++IG LQ++AT+V ++ P K
Sbjct: 80 NILGGSCARVCPVEELCEGACVLTKEGRRAVSIGRLQRYATDVALSHQLNFFTRPGWK-- 137
Query: 143 FPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IG GPA L+CA L+++GY ++ +YE
Sbjct: 138 --PYSVGVIGAGPAGLACAAELAKLGY-EVVVYESR 170
>gi|260587642|ref|ZP_05853555.1| glutamate synthase, homotetrameric [Blautia hansenii DSM 20583]
gi|331084068|ref|ZP_08333175.1| glutamate synthase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541907|gb|EEX22476.1| glutamate synthase, homotetrameric [Blautia hansenii DSM 20583]
gi|330402430|gb|EGG82000.1| glutamate synthase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 464
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA+RCL C +A C K CP I+I +FI + N+ A K I + L CG VCP
Sbjct: 34 AMEEAARCLNCKNAKCVKGCPVSINIPAFIHEVKEGNFEEAYKIIGQSSALPAVCGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + ++IG L++F + K+ GI P+A + K+A+IG G
Sbjct: 94 QESQCEGVC-IRGIKGEAVSIGKLERFVADWAKENGIK----PEAPAEKNGHKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L++MGY D+TI+E
Sbjct: 149 PSGLTCAGDLAKMGY-DVTIFE 169
>gi|168186041|ref|ZP_02620676.1| glutamate synthase [Clostridium botulinum C str. Eklund]
gi|169295977|gb|EDS78110.1| glutamate synthase [Clostridium botulinum C str. Eklund]
Length = 462
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE A+KEASRCL C + C K CP I+I FI + ++ + AAK I + L CG
Sbjct: 29 SEEEAVKEASRCLNCKNPQCVKGCPVSINIPEFIEHVKNREFEMAAKVIAKYSSLPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P++IG L++F + ++ I+ + + K + K+A+
Sbjct: 89 RVCPQETQCEGKCVLGIKGE-PVSIGKLERFVADWSRENNINLSQTEEKK----NMKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GP+ L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPSGLTCAGDLAKKGY-DVTIFE 168
>gi|118444969|ref|YP_878937.1| oxidoreductase [Clostridium novyi NT]
gi|118135425|gb|ABK62469.1| glutamate synthase (NADPH), homotetrameric [Clostridium novyi NT]
Length = 462
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE A+KEASRCL C + C K CP I+I FI + ++ + AAK I + L CG
Sbjct: 29 SEEEAVKEASRCLNCKNPQCVKGCPVSINIPEFIEHVKNREFEMAAKVIAKYSSLPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P++IG L++F + ++ I+ + + K + K+A+
Sbjct: 89 RVCPQETQCEGKCVLGIKGE-PVSIGKLERFVADWSRENNINLSQTEEKK----NMKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GP+ L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPSGLTCAGDLAKKGY-DVTIFE 168
>gi|295681145|ref|YP_003609719.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. CCGE1002]
gi|295441040|gb|ADG20208.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia sp. CCGE1002]
Length = 460
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ LS A+ A RC C DAPC +CPT IDI FI I + N GAA+ I
Sbjct: 25 NFADVA-PPLSANAAVIAADRCHYCYDAPCVNACPTGIDIPGFIRKIGNGNLKGAARDIL 83
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD-- 138
NPLG C VCPT LC G C + P+ IG LQ+ AT+ M P
Sbjct: 84 GANPLGGMCARVCPTEILCEGACVRNHQDGEPVQIGALQRHATDF--QMAREAAGAPALF 141
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGY 169
+ ++A++G GPA L+CA L+ G+
Sbjct: 142 KRASETGRRVAVVGAGPAGLACAHTLALAGH 172
>gi|433654751|ref|YP_007298459.1| NADPH-dependent glutamate synthase, homotetrameric
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292940|gb|AGB18762.1| NADPH-dependent glutamate synthase, homotetrameric
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 463
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA RC++C + PC CP + I FI I+++N+ GA + I
Sbjct: 22 NFKEVA-LGYEENMAVEEAERCIQCKNQPCVSGCPVHVQIPDFIKQIANRNFEGAYQKIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C E P+ IG L++FA + + ++ + K
Sbjct: 81 ETNNLPAICGRVCPQESQCESVCTRGKKGE-PVAIGRLERFAADWY-------MKNKEDK 132
Query: 141 VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYE 176
V+ P K+A+IG GPA LSCA L++MGY D TI+E
Sbjct: 133 VEAPKKTGRKVAVIGSGPAGLSCAGDLAKMGY-DTTIFE 170
>gi|238924191|ref|YP_002937707.1| putative oxidoreductase [Eubacterium rectale ATCC 33656]
gi|238875866|gb|ACR75573.1| putative oxidoreductase [Eubacterium rectale ATCC 33656]
gi|291529059|emb|CBK94645.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Eubacterium
rectale M104/1]
Length = 463
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E A+ EASRCL C +A C K CP I+I +F+ + + ++ A + I
Sbjct: 22 NFEEVCYGYNKEE-AMAEASRCLNCKNAQCMKGCPVSINIPAFVEQVKNGDFTKAYEIIS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + P++IG L++F + ++ GI P
Sbjct: 81 ESSALPAVCGRVCPQESQCEGKC-IRGFKGDPVSIGKLERFVADTARENGIK----PKTA 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 136 AEKNGKKVAVIGSGPAGLTCAGDLAKLGY-DVTIFE 170
>gi|167765170|ref|ZP_02437283.1| hypothetical protein BACSTE_03556 [Bacteroides stercoris ATCC
43183]
gi|167696798|gb|EDS13377.1| glutamate synthase (NADPH), homotetrameric [Bacteroides stercoris
ATCC 43183]
Length = 768
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 336 LTEEQALTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|291524918|emb|CBK90505.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Eubacterium
rectale DSM 17629]
Length = 463
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E A+ EASRCL C +A C K CP I+I +F+ + + ++ A + I
Sbjct: 22 NFEEVCYGYNKEE-AMAEASRCLNCKNAQCMKGCPVSINIPAFVEQVKNGDFTKAYEIIS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + P++IG L++F + ++ GI P
Sbjct: 81 ESSALPAVCGRVCPQESQCEGKC-IRGFKGDPVSIGKLERFVADTARENGIK----PKTA 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 136 AEKNGKKVAVIGSGPAGLTCAGDLAKLGY-DVTIFE 170
>gi|258515790|ref|YP_003192012.1| putative oxidoreductase [Desulfotomaculum acetoxidans DSM 771]
gi|257779495|gb|ACV63389.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
acetoxidans DSM 771]
Length = 469
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ L E A+ EA RCL+C PC+K CP ++ I FI ++ +++ GA K +
Sbjct: 27 RNFEEV-ALGLDEETAVLEAQRCLQCKKEPCRKGCPVEVLIPDFIKLVAERDFAGAIKKL 85
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS--QIRPP 137
N L CG VCP + C C + E P+ IG L++F + + GI +I P
Sbjct: 86 KEKNALPAVCGRVCPQENQCESYCTVGKKNE-PVAIGRLERFCADWERTQGIEVPEIAPS 144
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GP L+CA L+++G+ +TI+E
Sbjct: 145 TGK------KVAIIGSGPGGLTCAADLAKLGH-KVTIFE 176
>gi|373458213|ref|ZP_09549980.1| glutamate synthase (NADPH), homotetrameric [Caldithrix abyssi DSM
13497]
gi|371719877|gb|EHO41648.1| glutamate synthase (NADPH), homotetrameric [Caldithrix abyssi DSM
13497]
Length = 475
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA RCL+C C CP I IK FIT I+ ++ GA K I DN L CG VCP
Sbjct: 41 AIEEAQRCLQCPKPTCVAGCPVNIQIKDFITLIAEGDFIGAVKKIKEDNALPAICGRVCP 100
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C C + E P+ IG L++F + ++ G +I P+ KV K+A++G G
Sbjct: 101 QEEQCEEACVVGKRGE-PVAIGYLERFVADYERESG--KIDVPEVKVS-NGKKVAIVGSG 156
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LSCA L GY ++T++E
Sbjct: 157 PAGLSCAKDLREKGY-EVTVFE 177
>gi|222528659|ref|YP_002572541.1| glutamate synthase [Caldicellulosiruptor bescii DSM 6725]
gi|222455506|gb|ACM59768.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
bescii DSM 6725]
Length = 474
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + A+ EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 28 IHNFDEVCLGYTPDEAAM-EAQRCLECKNAPCVKGCPVEVKIPEFIRLIKEKKFKESYLK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++FA + F+ + P
Sbjct: 87 ILETNLLPAICGRVCPQETQCEQNC-VRGIKGEPIAIGKLERFAADWFRQNCEFEFSKPQ 145
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L++MGY ++TI+E
Sbjct: 146 PN----GRKVAIIGSGPAGLSCASSLAKMGY-EVTIFE 178
>gi|169350862|ref|ZP_02867800.1| hypothetical protein CLOSPI_01636 [Clostridium spiroforme DSM 1552]
gi|169292448|gb|EDS74581.1| glutamate synthase (NADPH), homotetrameric [Clostridium spiroforme
DSM 1552]
Length = 462
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C PC+ CP + I FI ++ N+ A K I
Sbjct: 22 NFEEVALGYTKEM-AMEEATRCLNCKHQPCKSGCPVGVPIPEFIQEVAAGNFEEAYKIIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S+N L CG VCP + C G C + + + IG L++F D ++ + P+ K
Sbjct: 81 SENALPAICGRVCPQENQCEGKC-VRGIKGESVGIGRLERFVA----DYHMAHGKTPELK 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA ++CA L++ GY D+T++E
Sbjct: 136 IEPNGKKVAIIGSGPAGITCAGELAKKGY-DVTVFE 170
>gi|182418245|ref|ZP_02949541.1| glutamate synthase , homotetrameric [Clostridium butyricum 5521]
gi|237667773|ref|ZP_04527757.1| glutamate synthase (NADPH), homotetrameric [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182377883|gb|EDT75426.1| glutamate synthase , homotetrameric [Clostridium butyricum 5521]
gi|237656121|gb|EEP53677.1| glutamate synthase (NADPH), homotetrameric [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 463
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A+KEASRCL C +A C+K CP IDI +FI + ++ GAAK I
Sbjct: 23 NFEEV-CLGYNEEEAVKEASRCLNCKNAQCRKGCPVSIDIPAFIAKLKESDFEGAAKEIA 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPPD 138
+ L CG VCP C G C L E ++IG L++F + ++ +S P
Sbjct: 82 KYSALPAVCGRVCPQEKQCEGKCVLGIKGES-VSIGKLERFTADWAAAHNVDLSATEPKK 140
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++ GY ++TI+E
Sbjct: 141 G------IKVAVIGSGPAGLTCAGDLAKKGY-EVTIFE 171
>gi|291562486|emb|CBL41302.1| sulfide dehydrogenase (flavoprotein) subunit SudA
[butyrate-producing bacterium SS3/4]
Length = 464
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + +E A+ EASRCL C +A C + CP +IDI +F+ + NY AAK I
Sbjct: 20 NFEEVCYG-YNEEEAVAEASRCLNCKNARCVQGCPVKIDIPAFVKEVKEGNYAEAAKVIG 78
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + ++IG L++F + ++ G+ +P
Sbjct: 79 RSSALPAVCGRVCPQESQCEGQC-VRGIKGEAVSIGKLERFVADWSRENGVVPEKPEKTN 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GP+ L+CA L+++GY ++TI+E
Sbjct: 138 ----GIKVAVIGSGPSGLTCAGDLAKLGY-EVTIFE 168
>gi|358064780|ref|ZP_09151342.1| glutamate synthase, homotetrameric [Clostridium hathewayi
WAL-18680]
gi|356697115|gb|EHI58712.1| glutamate synthase, homotetrameric [Clostridium hathewayi
WAL-18680]
Length = 462
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCLKC +A C CP I+I FI + N+ AAK I + L CG VCP
Sbjct: 33 AMEEASRCLKCKNAKCMGGCPVSINIPGFIKEVELGNFEEAAKVIAQSSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + PI+IG L++F + ++ G P A K+A+IG G
Sbjct: 93 QETQCEGKC-IRGIKGEPISIGKLERFVADWSRENGFV----PAAPEKTNGKKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L+++GY ++TI+E
Sbjct: 148 PAGLTCAGDLAKLGY-EVTIFE 168
>gi|167747896|ref|ZP_02420023.1| hypothetical protein ANACAC_02625 [Anaerostipes caccae DSM 14662]
gi|317472502|ref|ZP_07931823.1| glutamate synthase [Anaerostipes sp. 3_2_56FAA]
gi|167652718|gb|EDR96847.1| glutamate synthase (NADPH), homotetrameric [Anaerostipes caccae DSM
14662]
gi|316900016|gb|EFV22009.1| glutamate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 462
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + PC CP + I FI ++ ++ GA + I
Sbjct: 22 NFKEVALGYTKEM-AMEEATRCLNCKNKPCVNGCPVNVPIPEFIEKVAAGDFEGAYEVIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S+N L CG VCP + C G C + + P+ IG +++F D ++ P +
Sbjct: 81 SENALPAICGRVCPQENQCEGKC-VRGIKGEPVGIGRMERFVA----DYHMANAEPAEVS 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A++GCGPA ++CA L + GY ++T++E
Sbjct: 136 IEKNGKKVAVVGCGPAGITCAGELIKKGY-EVTVFE 170
>gi|255524400|ref|ZP_05391357.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Clostridium carboxidivorans P7]
gi|296187520|ref|ZP_06855915.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium
carboxidivorans P7]
gi|255511957|gb|EET88240.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Clostridium carboxidivorans P7]
gi|296048042|gb|EFG87481.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium
carboxidivorans P7]
Length = 421
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA+RCL C DAPC K+CP + FI S+ +N+ GA + I ++N L C VCP
Sbjct: 19 AMEEAARCLLCHDAPCSKACPAGTNPSKFIRSLRFRNFKGAVETIRTNNVLAGVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C+ ++ PI IG LQ++ T+ K++ + + KV+ K+A+IG G
Sbjct: 79 YDKYCEGACSRCGIDK-PIRIGELQRYLTDYEKNINMKVLD----KVEATKEKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKN 178
P+ LS A L+ GY ++T++E+
Sbjct: 134 PSGLSAAATLALRGY-NVTVFEEK 156
>gi|312623032|ref|YP_004024645.1| glutamate synthase (nadph), homotetrameric [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203499|gb|ADQ46826.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
kronotskyensis 2002]
Length = 474
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + A +EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 28 IHNFDEVCLGYTPDEAA-REAQRCLECKNAPCVKGCPVEVKIPEFIQLIKKKKFKESYFK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++FA + F+ + P
Sbjct: 87 ILETNLLPAICGRVCPQETQCEQNC-VRGMKGEPIAIGKLERFAADWFRQNCEFEFSKPQ 145
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L++MGY ++TI+E
Sbjct: 146 PN----GRKVAIIGSGPAGLSCASSLAKMGY-EVTIFE 178
>gi|289577788|ref|YP_003476415.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
italicus Ab9]
gi|289527501|gb|ADD01853.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
italicus Ab9]
Length = 463
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ +E A+ EASRCL+C C CP + I FI +I+ K + A K
Sbjct: 18 IKNFNEV-ALGYAEEEAILEASRCLQCPKPTCVAGCPVHVRIPEFIKAITKKEFEEAYKI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I S N L CG VCP + C C L + PI IG L++F + + + + P+
Sbjct: 77 IKSTNSLPAVCGRVCPQEEQCEKNCVLNKVGK-PIAIGRLERFVADYALENNVEEEVKPE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 136 KK----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|302871268|ref|YP_003839904.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
obsidiansis OB47]
gi|302574127|gb|ADL41918.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
obsidiansis OB47]
Length = 461
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + A++EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 18 IHNFDEVCFGYTPDE-AVREAQRCLECKNAPCVKGCPVEVKIPEFIKLIKEKKFKESYLK 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++F + F+ + P
Sbjct: 77 ILETNLLPAICGRVCPQETQCEQNC-VRGIKGEPIAIGKLERFVADWFRQNCEFEFSKPQ 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L++MGY ++TI+E
Sbjct: 136 PN----KRKVAIIGSGPAGLSCASSLAKMGY-NVTIFE 168
>gi|300913245|ref|ZP_07130562.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X561]
gi|307723741|ref|YP_003903492.1| glutamate synthase [Thermoanaerobacter sp. X513]
gi|300889930|gb|EFK85075.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X561]
gi|307580802|gb|ADN54201.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter sp.
X513]
Length = 463
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ +E A+ EASRC++C C CP + I FI +I+ K + A K
Sbjct: 18 IKNFNEV-ALGYTEEEAILEASRCIQCPKPTCVAGCPVHVRIPEFIKAITKKEFEEAYKI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I S N L CG VCP + C C L + PI IG L++FA + + + + P+
Sbjct: 77 IKSTNSLPAVCGRVCPQEEQCEKNCVLNKIGK-PIAIGRLERFAADYALENNVEEEVKPE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 136 KK----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|260575574|ref|ZP_05843572.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodobacter sp. SW2]
gi|259022217|gb|EEW25515.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodobacter sp. SW2]
Length = 443
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D L A+ A RC C DAPC +CPT IDI FI I+ AAK I
Sbjct: 22 RNFADAA-PRLGRHEAMVAADRCYFCFDAPCTTACPTSIDIPLFIRQIATGTPDAAAKTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F+ N +G C VCPT LC C AAE P+ IG LQ++AT+ ++Q P
Sbjct: 81 FAQNIMGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRYATDGL----MAQAGHPFT 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK-------NTYDMVT 184
+ +A++G GPA L+CA L+ G+ + +Y+ N Y + T
Sbjct: 137 RAAATGKSVAVVGAGPAGLACAHRLAMKGH-AVQVYDARPKPGGLNEYGLAT 187
>gi|427383801|ref|ZP_18880521.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
oleiciplenus YIT 12058]
gi|425728506|gb|EKU91364.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
oleiciplenus YIT 12058]
Length = 768
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I AAK + + L C
Sbjct: 336 LTEEQALTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEILEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C +E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCEAKCIHLKMKEQPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY ++T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-EVTVFE 478
>gi|78188515|ref|YP_378853.1| oxidoreductase [Chlorobium chlorochromatii CaD3]
gi|78170714|gb|ABB27810.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Chlorobium
chlorochromatii CaD3]
Length = 480
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 11/145 (7%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A +EA RC++C D C K CP I I FI I+ ++ GAA+ I DN L CG VCP
Sbjct: 45 AQQEALRCIQCKDPVCIKGCPVNIKIDQFIKLIAEGDFLGAARKIKEDNVLPAICGRVCP 104
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRPPDAKVDFPDTKIALI 151
D C C L + PI IG L++FA + ++ G + ++ P K ++A+I
Sbjct: 105 QEDQCEKVCVL-TKKYTPIAIGNLERFAADYEREHGDIELPSVKAPTGK------RVAVI 157
Query: 152 GCGPASLSCATFLSRMGYDDITIYE 176
G GPA LSCA L ++G+ D+T++E
Sbjct: 158 GSGPAGLSCANDLIQLGH-DVTVFE 181
>gi|83590360|ref|YP_430369.1| putative oxidoreductase [Moorella thermoacetica ATCC 39073]
gi|83573274|gb|ABC19826.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Moorella
thermoacetica ATCC 39073]
Length = 463
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 12/161 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NF+++ E AL EA RCL+C APC++ CP ++DI +FI + +++ GA
Sbjct: 19 IHNFNEVAQGYTREM-ALAEAQRCLQCKKAPCRQGCPVEVDIPAFIARLKEQDFDGAIAK 77
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE---VFKDMGISQIR 135
I N L CG VCP + C C L E P+ IG L++F + + S+
Sbjct: 78 IKEKNNLPAICGRVCPQENQCEKFCTLGKKHE-PVAIGRLERFLADYQLAKGETASSEKA 136
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
PP K+A+IG GPA L+ A L+RMG+ +T++E
Sbjct: 137 PPSG------YKVAVIGSGPAGLTAAADLARMGH-QVTVFE 170
>gi|329962122|ref|ZP_08300133.1| glutamate synthase [Bacteroides fluxus YIT 12057]
gi|328530770|gb|EGF57628.1| glutamate synthase [Bacteroides fluxus YIT 12057]
Length = 769
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 336 LTEEQALIEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|160890949|ref|ZP_02071952.1| hypothetical protein BACUNI_03394 [Bacteroides uniformis ATCC 8492]
gi|317481478|ref|ZP_07940544.1| glutamate synthase [Bacteroides sp. 4_1_36]
gi|156859170|gb|EDO52601.1| glutamate synthase (NADPH), homotetrameric [Bacteroides uniformis
ATCC 8492]
gi|316902388|gb|EFV24276.1| glutamate synthase [Bacteroides sp. 4_1_36]
Length = 768
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 336 LTEEQALTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + K+A
Sbjct: 396 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKVA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|319782784|ref|YP_004142260.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317168672|gb|ADV12210.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 454
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 1 MPEQSSLAGI--NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQI 58
MPE GI ++ +NF D+ H L AL E+ RC C DAPC +CPT I
Sbjct: 1 MPEGQFREGIAGGRLSADQYADNFSDL-HPPLDHHEALVESDRCYFCYDAPCMNACPTSI 59
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
DI FI IS N G+AK IF N LG C VCPT LC C AE P+ IG L
Sbjct: 60 DIPLFIRQISTGNPIGSAKTIFDQNILGGMCARVCPTETLCEEVCVREVAEGKPVQIGRL 119
Query: 119 QQFATEVFKDMGISQIRPPDAKVDFPDTK-IALIGCGPASLSCATFLSRMGYDDITIYE 176
Q++AT+V MG ++ P A+ P K +A++G GPA L+ A L+R G+ D+TI E
Sbjct: 120 QRYATDVA--MGENKQFYPRAE---PTGKTVAVVGAGPAGLAAAHRLARHGH-DVTILE 172
>gi|402855355|ref|XP_003892291.1| PREDICTED: uncharacterized protein LOC100999010, partial [Papio
anubis]
Length = 241
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 168 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 227
>gi|344996973|ref|YP_004799316.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965192|gb|AEM74339.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
lactoaceticus 6A]
Length = 474
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + AL EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 28 IHNFDEVCLGYTPDEAAL-EAQRCLECKNAPCVKGCPVEVKIPEFIRLIKEKKFKESYLK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++F + F+ + P
Sbjct: 87 ILETNLLPAICGRVCPQETQCEQNC-VRGIKGEPIAIGKLERFVADWFRQNCEFEFSKPQ 145
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L++MGY ++TI+E
Sbjct: 146 PN----GRKVAIIGSGPAGLSCASSLAKMGY-EVTIFE 178
>gi|297544076|ref|YP_003676378.1| glutamate synthase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841851|gb|ADH60367.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 463
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ +E A+ EASRCL+C C CP + I FI +I+ K + A K
Sbjct: 18 IKNFNEV-ALGYAEEEAILEASRCLQCPKPTCVAGCPVHVRIPEFIKAITKKEFEEAYKI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I S N L CG VCP + C C L + PI IG L++F + + + + P+
Sbjct: 77 IKSTNSLPAVCGRVCPQEEQCEKNCVLNKIGK-PIAIGRLERFVADYALENNVEEEVKPE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 136 KK----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|225174886|ref|ZP_03728883.1| glutamate synthase (NADPH), homotetrameric [Dethiobacter
alkaliphilus AHT 1]
gi|225169526|gb|EEG78323.1| glutamate synthase (NADPH), homotetrameric [Dethiobacter
alkaliphilus AHT 1]
Length = 463
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NFD++ + A+ EA RCL C APC++ CP +++I +FI SI + + + A
Sbjct: 20 VKNFDEVPFGYDIDT-AVAEAERCLDCKKAPCRQGCPVEVNIPAFIMSIKDRKFEESIAA 78
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
+ +DN L CG VCP C C + A + P+ IG L++F + G+ + P+
Sbjct: 79 MKADNSLPAICGRVCPQESQCESFC-VRAKKGEPVGIGRLERFIADWQLKEGVEDPKLPE 137
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A++G GPA L+CA L+++G+ D+T+YE
Sbjct: 138 PT----GKKVAVVGAGPAGLTCAGDLAKLGH-DVTMYE 170
>gi|317496957|ref|ZP_07955287.1| glutamate synthase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895969|gb|EFV18121.1| glutamate synthase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 463
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C + PC CP + I +FI ++ ++ GA + I
Sbjct: 22 NFEEVALGYTKEM-AMEEAARCLNCKNKPCVGGCPVNVPIPAFIEKVAAGDFEGAYEVIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
++N L CG VCP + C G C + + P+ IG +++F D ++ + +
Sbjct: 81 TENALPAICGRVCPQENQCEGKC-VRGIKGDPVGIGRMERFVA----DWHMANAKETEVN 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A++GCGPA ++CA L + GY D+T++E
Sbjct: 136 IEKNGMKVAVVGCGPAGITCAGELIKKGY-DVTVFE 170
>gi|312128217|ref|YP_003993091.1| glutamate synthase (nadph), homotetrameric [Caldicellulosiruptor
hydrothermalis 108]
gi|311778236|gb|ADQ07722.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
hydrothermalis 108]
Length = 464
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + A+ EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 18 IHNFDEVCFGYTPDEAAM-EAQRCLQCKNAPCVKGCPVEVKIPEFIQLIKEKKFKESYFK 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++F + F+ + P
Sbjct: 77 ILETNLLPAICGRVCPQETQCEQNC-VRGIKGEPIAIGKLERFVADWFRQNCEFEFSKPQ 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L++MGY ++TI+E
Sbjct: 136 PN----GRKVAIIGSGPAGLSCASSLAKMGY-EVTIFE 168
>gi|240102458|ref|YP_002958767.1| putative oxidoreductase [Thermococcus gammatolerans EJ3]
gi|239910012|gb|ACS32903.1| Glutamate synthase (NADPH), homotetrameric (gltA) [Thermococcus
gammatolerans EJ3]
Length = 471
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
A+KEA RCL+C + APC K CP I+I +FI I + GA + I++DN L G V
Sbjct: 35 AVKEAERCLQCPENYAPCIKGCPVHINIPAFIAKIKEGDIKGALRIIWNDNTLPAITGRV 94
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGI--SQIRPPDAKVDFPDTKIAL 150
CP D C G C + + +NIG L++F + + GI + + K K+A+
Sbjct: 95 CPQEDQCEGACVVGKVGDA-VNIGKLERFVADYARKHGIEEELLCEFEEKCTGERGKVAV 153
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
+G GPA L+CA L++MGY +TI+E
Sbjct: 154 VGAGPAGLTCAGELAKMGY-KVTIFE 178
>gi|291522063|emb|CBK80356.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Coprococcus
catus GD/7]
Length = 462
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C +A C CP I+I +FI + N+ A++ I + L CG VCP
Sbjct: 34 AMEEASRCLNCKNARCITGCPVNINIPAFIAEVKEGNFEKASQVIGESSALPAVCGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C L E P++IG L++F + ++ + I P AK + K+A+IG G
Sbjct: 94 QESQCEGKCILGIKGE-PVSIGKLERFTADWARE---NNIEPVPAK-EKKGKKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY D+ I+E
Sbjct: 149 PAGLTCAGDLAKMGY-DVKIFE 169
>gi|241205970|ref|YP_002977066.1| oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859860|gb|ACS57527.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 453
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IGGLQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGGLQRYATDAAMQAG 129
>gi|147918931|ref|YP_687343.1| NADPH-dependent glutamate synthase, small subunit [Methanocella
arvoryzae MRE50]
gi|110622739|emb|CAJ38017.1| NADPH-dependent glutamate synthase, small subunit [Methanocella
arvoryzae MRE50]
Length = 466
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +T +E AL EA RCLKC C + CP IDI+ FI I + AA+
Sbjct: 24 IKNFDEVA-STYTEEEALAEAKRCLKCKTPMCIEGCPVGIDIRQFIDEIKQGKFEDAART 82
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I + N L CG VCP C C L + + P+ IG L++FA E + G + P
Sbjct: 83 IKAKNSLPAICGRVCPQESQCEKLCIL-SMKWTPVAIGRLERFAAE-HEKQGEKPVIP-- 138
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+ A L++MGY + I+E
Sbjct: 139 ---EWNGKKVAVIGSGPAGLTAAGELAKMGY-KVVIFE 172
>gi|120601816|ref|YP_966216.1| oxidoreductase [Desulfovibrio vulgaris DP4]
gi|120562045|gb|ABM27789.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Desulfovibrio
vulgaris DP4]
Length = 476
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 7/161 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NFD++ S A++EASRCL+C C K CP ++ I FI +++ + A +
Sbjct: 25 VGNFDEVA-LGYSREDAMREASRCLQCKKPKCVKGCPVEVQIPQFIAALAKGDVESAYRT 83
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDM-GISQI--R 135
+ N L CG VCP + C G C L A+ P+ IG L+++A + + + Q+ R
Sbjct: 84 LRETNSLPAVCGRVCPQENQCEGACIL-GAKGQPVAIGRLERYAADTYMALDACDQLTGR 142
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P +D PD K+A IG GP+SL+ A +LS G+ +T+YE
Sbjct: 143 PECPLID-PDLKVACIGSGPSSLTVAGYLSSRGF-KVTVYE 181
>gi|167766263|ref|ZP_02438316.1| hypothetical protein CLOSS21_00767 [Clostridium sp. SS2/1]
gi|167711982|gb|EDS22561.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. SS2/1]
gi|291559103|emb|CBL37903.1| sulfide dehydrogenase (flavoprotein) subunit SudA
[butyrate-producing bacterium SSC/2]
Length = 463
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C + PC CP + I +FI ++ ++ GA + I
Sbjct: 22 NFEEVALGYTKEM-AMEEAARCLNCKNKPCVGGCPVNVPIPAFIEKVAAGDFEGAYEVIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
++N L CG VCP + C G C + + P+ IG +++F D ++ + +
Sbjct: 81 TENALPAICGRVCPQENQCEGKC-VRGIKGEPVGIGRMERFVA----DWHMANAKETEVN 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A++GCGPA ++CA L + GY D+T++E
Sbjct: 136 IEKNGMKVAVVGCGPAGITCAGELIKKGY-DVTVFE 170
>gi|429763465|ref|ZP_19295814.1| glutamate synthase [Anaerostipes hadrus DSM 3319]
gi|429178659|gb|EKY19935.1| glutamate synthase [Anaerostipes hadrus DSM 3319]
Length = 463
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C + PC CP + I +FI ++ ++ GA + I
Sbjct: 22 NFEEVALGYTKEM-AMEEAARCLNCKNKPCVGGCPVNVPIPAFIEKVAAGDFEGAYEVIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
++N L CG VCP + C G C + + P+ IG +++F D ++ + +
Sbjct: 81 TENALPAICGRVCPQENQCEGKC-VRGIKGEPVGIGRMERFVA----DWHMANAKETEVN 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A++GCGPA ++CA L + GY D+T++E
Sbjct: 136 IEKNGMKVAVVGCGPAGITCAGELIKKGY-DVTVFE 170
>gi|266622863|ref|ZP_06115798.1| glutamate synthase [Clostridium hathewayi DSM 13479]
gi|288865393|gb|EFC97691.1| glutamate synthase [Clostridium hathewayi DSM 13479]
Length = 465
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A EASRCLKC + C CP IDI FI + NY AAK I
Sbjct: 20 NFEEV-CLGYNEEEARAEASRCLKCKNPKCVGGCPVSIDIPGFIKEVQEGNYEEAAKVIA 78
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + PI+IG L++F + ++ G P A
Sbjct: 79 KSSALPAVCGRVCPQESQCEGQC-IRGIKGEPISIGKLERFVADWSRENGFV----PAAP 133
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GP+ ++CA L++MGY ++TI+E
Sbjct: 134 EKTNGKKVAVIGSGPSGVTCAGDLAKMGY-EVTIFE 168
>gi|253681119|ref|ZP_04861922.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum D
str. 1873]
gi|253562968|gb|EES92414.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum D
str. 1873]
Length = 462
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE A++EASRCL C + C K CP I+I FI + ++ + AAK I + L CG
Sbjct: 29 SEEEAVREASRCLNCKNPQCVKGCPVSINIPEFIEYVKNREFEMAAKVIAKYSSLPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P++IG L++F + ++ I+ + K + K+A+
Sbjct: 89 RVCPQETQCEGKCVLGIKGE-PVSIGKLERFVADWSRENNINLSETEEKK----NMKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GP+ L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPSGLTCAGNLAKKGY-DVTIFE 168
>gi|167386568|ref|XP_001737815.1| dihydropyrimidine dehydrogenase [Entamoeba dispar SAW760]
gi|165899267|gb|EDR25906.1| dihydropyrimidine dehydrogenase, putative [Entamoeba dispar SAW760]
Length = 901
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE + EA RCL CA+ C + CPTQ+D K + + N+Y AA+ + NPL L+CG
Sbjct: 34 SESEIVHEARRCLYCAEPNCMRCCPTQLDAKRMVHAAGEHNFYEAARVALTANPLALSCG 93
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
+C + C GCNL G I+I +Q F+ + FK+ +I P + + +A+
Sbjct: 94 HLCSAEECCKAGCNLSKTHAGAIDINAIQAFSLQRFKEY---RIMPTIGNIPVIEKSVAI 150
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IG GPA L+ A+F +R + I ++E++ +
Sbjct: 151 IGAGPAGLAAASFFARCNFKKIVVFERSAH 180
>gi|187776779|ref|ZP_02993252.1| hypothetical protein CLOSPO_00295 [Clostridium sporogenes ATCC
15579]
gi|187775438|gb|EDU39240.1| glutamate synthase (NADPH), homotetrameric [Clostridium sporogenes
ATCC 15579]
Length = 461
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEEAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKKGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSKTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|416352810|ref|ZP_11681399.1| putative oxidoreductase [Clostridium botulinum C str. Stockholm]
gi|338195700|gb|EGO87949.1| putative oxidoreductase [Clostridium botulinum C str. Stockholm]
Length = 453
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE A++EASRCL C + C K CP I+I FI + ++ + AAK I + L CG
Sbjct: 29 SEEEAVREASRCLNCKNPQCVKGCPVSINIPEFIEYVKNREFEMAAKVIAKYSSLPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P++IG L++F + ++ I+ + K + K+A+
Sbjct: 89 RVCPQETQCEGKCVLGIKGE-PVSIGKLERFVADWSRENNINLSETEEKK----NMKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GP+ L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPSGLTCAGDLAKKGY-DVTIFE 168
>gi|300856868|ref|YP_003781852.1| glutamate synthase [Clostridium ljungdahlii DSM 13528]
gi|300436983|gb|ADK16750.1| glutamate synthase [Clostridium ljungdahlii DSM 13528]
Length = 773
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ +E A+KEASRCL C C CP I I FI + ++N+ AAK I
Sbjct: 333 NFDEV-CLGYTEEEAVKEASRCLNCKKPMCVTQCPVTITIPKFIEQVKNRNFEEAAKIIA 391
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPD 138
+ L CG VCP C G C L + + IG L++F + + ++ +S+ P +
Sbjct: 392 ESSALPAVCGRVCPQETQCEGKCVL-GKKGDAVAIGKLERFVADWSRKNNIDLSKTLPKN 450
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GP+ L+CA L+++GY D+TI+E
Sbjct: 451 GK------KVAVIGSGPSGLTCAGDLAKLGY-DVTIFE 481
>gi|312792837|ref|YP_004025760.1| glutamate synthase (nadph), homotetrameric [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179977|gb|ADQ40147.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 474
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + A +EA RCL+C +APC K CP ++ I FI I K + +
Sbjct: 28 IHNFDEVCLGYTPDEAA-REAQRCLECKNAPCVKGCPVEVKIPEFIRLIKEKKFKESYLK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++F + F+ + P
Sbjct: 87 ILETNLLPAICGRVCPQETQCEQNC-VRGIKGEPIAIGKLERFVADWFRQNCEFEFSKPQ 145
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L++MGY ++TI+E
Sbjct: 146 PN----GRKVAIIGSGPAGLSCASSLAKMGY-EVTIFE 178
>gi|256750869|ref|ZP_05491753.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus CCSD1]
gi|256750204|gb|EEU63224.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus CCSD1]
Length = 463
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ +E A+ EASRC++C C CP + I FI +I+ + + A K I
Sbjct: 19 KNFNEV-ALGYTEEEAIAEASRCIQCPKPTCVAGCPVHVRIPEFIKAITKREFEEAYKII 77
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N L CG VCP + C C L + PI IG L++FA + + + + P+
Sbjct: 78 KSTNSLPAVCGRVCPQEEQCEKNCVLNKIGK-PIAIGRLERFAADYALENNVEEEVKPEK 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 137 K----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|302875794|ref|YP_003844427.1| glutamate synthase (NADPH), homotetrameric [Clostridium
cellulovorans 743B]
gi|307689229|ref|ZP_07631675.1| putative oxidoreductase [Clostridium cellulovorans 743B]
gi|302578651|gb|ADL52663.1| glutamate synthase (NADPH), homotetrameric [Clostridium
cellulovorans 743B]
Length = 457
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ T E AL EASRCL C + C+ +CP + I FI SI KNY AA+
Sbjct: 18 ITNFNEV-CTGYDEDSALTEASRCLNCKNPKCKANCPVNMSIPDFIASIKEKNYEEAARI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I + L C VCP C G C L E I+IG L++F ++ ++ + +
Sbjct: 77 IDKHSALSAICSRVCPQEKQCEGNCVLGIKGE-SISIGNLERFVSDWARENNCEFLDKEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
A K+A+IG GPA L+CA L+++GY ++TI+E
Sbjct: 136 AN----GKKVAVIGSGPAGLTCARDLAKLGY-EVTIFE 168
>gi|20092583|ref|NP_618658.1| putative oxidoreductase [Methanosarcina acetivorans C2A]
gi|19917859|gb|AAM07138.1| glutamate synthase (NADPH) [Methanosarcina acetivorans C2A]
Length = 469
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 20/178 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + F +L +D AL EASRCL C D C + CP +DI
Sbjct: 19 MPEQPAEERRKNFNEVTLGYTKED----------ALAEASRCLACKDPKCVEGCPVNVDI 68
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI I +N+ GA + I + N L CG VCP C C L + P+ IG L++
Sbjct: 69 PGFIQLICEENFEGAIERIKATNALPAICGRVCPQETQCEARCVLGKKSQ-PVAIGRLER 127
Query: 121 FATEVFKDMGIS--QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + ++ G+ ++ PP K K+A++G GPA L+ A L+++G+ +TI+E
Sbjct: 128 FCADYEREKGVKAPEVMPPTGK------KVAVVGSGPAGLTAAADLAKLGH-KVTIFE 178
>gi|86358876|ref|YP_470768.1| oxidoreductase [Rhizobium etli CFN 42]
gi|86282978|gb|ABC92041.1| probable NADPH-dependent glutamate synthase small chain protein
[Rhizobium etli CFN 42]
Length = 453
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N GAAK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPLGAAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ +G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQVG 129
>gi|218129698|ref|ZP_03458502.1| hypothetical protein BACEGG_01277 [Bacteroides eggerthii DSM 20697]
gi|317475948|ref|ZP_07935203.1| glutamate synthase [Bacteroides eggerthii 1_2_48FAA]
gi|217988110|gb|EEC54434.1| glutamate synthase (NADPH), homotetrameric [Bacteroides eggerthii
DSM 20697]
gi|316907880|gb|EFV29579.1| glutamate synthase [Bacteroides eggerthii 1_2_48FAA]
Length = 768
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 336 LTKEQALTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 395
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + KIA
Sbjct: 396 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVPEIK-EKNGIKIA 452
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 453 VIGSGPAGLSFAGDMAKYGY-DVTVFE 478
>gi|424833383|ref|ZP_18258108.1| dihydropyrimidine dehydrogenase subunit A [Clostridium sporogenes
PA 3679]
gi|365979371|gb|EHN15433.1| dihydropyrimidine dehydrogenase subunit A [Clostridium sporogenes
PA 3679]
Length = 461
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEEAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKKGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
+ D+ L CG VCP C G C L E P+ IG L++F + + + + +
Sbjct: 77 VAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSKTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|408377714|ref|ZP_11175315.1| dihydropyrimidine dehydrogenase subunit A [Agrobacterium
albertimagni AOL15]
gi|407748705|gb|EKF60220.1| dihydropyrimidine dehydrogenase subunit A [Agrobacterium
albertimagni AOL15]
Length = 453
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ NF D+ H L AL + RC C DAPC +CPT IDI FI IS N
Sbjct: 13 LDAADYAKNFSDL-HPRLGGHEALVASDRCYFCHDAPCMTACPTAIDIPMFIRQISTGNP 71
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAAK IF N LG C VCPT LC C AEE P+ IG LQ++AT++ + G
Sbjct: 72 LGAAKTIFDQNILGGMCARVCPTETLCEEACVRNTAEERPVEIGRLQRYATDIAIEEGRQ 131
Query: 133 QIRP 136
RP
Sbjct: 132 FYRP 135
>gi|193215569|ref|YP_001996768.1| oxidoreductase [Chloroherpeton thalassium ATCC 35110]
gi|193089046|gb|ACF14321.1| glutamate synthase (NADPH), homotetrameric [Chloroherpeton
thalassium ATCC 35110]
Length = 482
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 21/179 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + A C NFD++ E A++EA RC++C D C ++CP + I
Sbjct: 22 MPEQEAKA------RCG---NFDEVNFGYTPEL-AMEEALRCIQCKDPVCIEACPVNVKI 71
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI ++ + AA+ I DN L CG VCP D C C + E P+ IG L++
Sbjct: 72 DEFIGLVAEGKFLDAAQKIKEDNALPAICGRVCPQEDQCEQVCVIGKKSE-PVAIGNLER 130
Query: 121 FATEVFK---DMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + + +M + +++P K K+A++G GPA L+CA L++ G+ ++T++E
Sbjct: 131 FVADYERNSGNMKLPEVKPATGK------KVAVVGSGPAGLTCANDLAQWGH-EVTVFE 182
>gi|89067348|ref|ZP_01154861.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Oceanicola granulosus HTCC2516]
gi|89046917|gb|EAR52971.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Oceanicola granulosus HTCC2516]
Length = 446
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D+ H + A A RC C DAPC +CPT IDI FI I+ A I
Sbjct: 21 RNFSDL-HAPFDKHEAHVAADRCYFCHDAPCVTACPTSIDIPLFIRQIATGQPEAAGVTI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE-VFKDMGISQIRPPD 138
F N G C VCPT +LC C AE P+ IG LQ++AT+ V G +R D
Sbjct: 80 FEQNIFGGMCARVCPTEELCEEVCVREVAEGKPVEIGRLQRYATDSVMTRQGHPFVRAAD 139
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A++G GPA L+CA L+ G+ + +YE
Sbjct: 140 TG-----KRVAVVGAGPAGLACAHRLAMQGH-KVDVYE 171
>gi|303231726|ref|ZP_07318449.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
atypica ACS-049-V-Sch6]
gi|302513675|gb|EFL55694.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
atypica ACS-049-V-Sch6]
Length = 452
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+H N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIAHGNFGLANDILAERTNLPAICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY D+T++E
Sbjct: 135 PAGLSVAGDVAKLGY-DVTVFE 155
>gi|167769401|ref|ZP_02441454.1| hypothetical protein ANACOL_00731 [Anaerotruncus colihominis DSM
17241]
gi|167668369|gb|EDS12499.1| glutamate synthase (NADPH), homotetrameric [Anaerotruncus
colihominis DSM 17241]
Length = 462
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 13/160 (8%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ +E A++EA RCL C PC CP + I FI ++ ++ GA + I
Sbjct: 21 HNFEEVALGYTAEM-AMEEAQRCLHCKHQPCVAGCPVNVHIPQFIAKVAEGDFAGAYREI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP C G C + + P+ IG L++F + + + G D
Sbjct: 80 ALTNGLPAVCGRVCPQETQCEGKC-VRGIKGEPVGIGRLERFVADWWMEHG-------DG 131
Query: 140 KVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + P + ++A++G GPA L+CA L++MGY ++T++E
Sbjct: 132 KTEKPASNGHRVAVVGAGPAGLTCAGDLAKMGY-EVTVFE 170
>gi|46580880|ref|YP_011688.1| oxidoreductase [Desulfovibrio vulgaris str. Hildenborough]
gi|387154129|ref|YP_005703065.1| glutamate synthase (NADPH), homotetrameric [Desulfovibrio vulgaris
RCH1]
gi|46450300|gb|AAS96948.1| glutamate synthase, small subunit [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234573|gb|ADP87427.1| glutamate synthase (NADPH), homotetrameric [Desulfovibrio vulgaris
RCH1]
Length = 476
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 7/161 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF ++ S A++EASRCL+C C K CP ++ I FI +++ + A +
Sbjct: 25 VGNFHEVA-LGYSREDAMREASRCLQCKKPKCVKGCPVEVQIPQFIAALAKGDVESAYRT 83
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDM-GISQI--R 135
+ N L CG VCP + C G C L A+ P+ IG L+++A + + + Q+ R
Sbjct: 84 LRETNSLPAVCGRVCPQENQCEGACIL-GAKGQPVAIGRLERYAADTYMALDACDQLTGR 142
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P +D PD K+A IG GPASL+ A +LS G+ +T+YE
Sbjct: 143 PECPLID-PDLKVACIGSGPASLTVAGYLSSRGF-KVTVYE 181
>gi|401679262|ref|ZP_10811195.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
sp. ACP1]
gi|400219844|gb|EJO50706.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
sp. ACP1]
Length = 452
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+H N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIAHGNFGLANDILAERTNLPAICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY D+T++E
Sbjct: 135 PAGLSVAGDVAKLGY-DVTVFE 155
>gi|327398398|ref|YP_004339267.1| glutamate synthase [Hippea maritima DSM 10411]
gi|327181027|gb|AEA33208.1| glutamate synthase (NADPH), homotetrameric [Hippea maritima DSM
10411]
Length = 471
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 13/162 (8%)
Query: 19 VNNFDDIKHT-TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
V NF+++ + +L E A+KEA RCL+C A C + CP + I FI I ++ A K
Sbjct: 27 VKNFNEVPYGYSLEE--AIKEAQRCLQCKPAACVEGCPADVHIPQFIDKIIDEDIEAAFK 84
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I N L CG VCP + C G C + + PI IG L++F + ++ GI
Sbjct: 85 EIKITNALPAVCGRVCPQEEQCEGNCVMNKKGK-PIAIGRLERFVADWAREHGIV----- 138
Query: 138 DAKVDFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
D +D K+A++G GPA L+CA L+++GY D+T++E
Sbjct: 139 DEDIDESQKKGKKVAIVGSGPAGLACAADLAKLGY-DVTVFE 179
>gi|433774631|ref|YP_007305098.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Mesorhizobium australicum WSM2073]
gi|433666646|gb|AGB45722.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Mesorhizobium australicum WSM2073]
Length = 451
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 1 MPEQSSLAGI--NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQI 58
MPE GI +NF D+ H L AL E+ RC C DAPC +CPT I
Sbjct: 1 MPEGQFKEGIVGGRLLPDQYADNFSDL-HPPLDHHEALVESDRCYFCYDAPCMNACPTSI 59
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
DI FI IS N G+AK IF N LG C VCPT LC C AE P+ IG L
Sbjct: 60 DIPLFIRQISTGNPIGSAKTIFDQNILGGMCARVCPTETLCEEVCVREVAEGKPVQIGRL 119
Query: 119 QQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
Q++AT D+ +S+ R + + +A++G GPA L+ A L+R G+ D+TI E
Sbjct: 120 QRYAT----DVAMSESRQFYPRAEPTGKTVAVVGAGPAGLAAAHRLARHGH-DVTILE 172
>gi|386810756|ref|ZP_10097982.1| glutamate synthase [planctomycete KSU-1]
gi|386405480|dbj|GAB60863.1| glutamate synthase [planctomycete KSU-1]
Length = 797
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + + V NF+++ + E A +EA RCL+C C+ CP IDI
Sbjct: 335 MPEQDPV---------NRVKNFEEVPYGYTPEM-ARQEALRCLQCKKPLCRDGCPVSIDI 384
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI I+ ++ AA+ I N L CG VCP D C C + + P+ IG L++
Sbjct: 385 PGFIKLIAEGDFLAAARKIKETNALPAVCGRVCPQEDQCEKVC-IIGKKFKPVAIGNLER 443
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + ++ I AK + K+A++G GPA L+CA L +MG+ D+TI+E
Sbjct: 444 FVADYERNHNAVTIPELPAKTGY---KVAIVGGGPAGLACAGELIKMGH-DVTIFE 495
>gi|323141053|ref|ZP_08075959.1| glutamate synthase (NADPH), homotetrameric [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414501|gb|EFY05314.1| glutamate synthase [Phascolarctobacterium succinatutens YIT 12067]
Length = 458
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 5/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A+ EA RCL C C SCP IDI FI ++ +N+ A K +
Sbjct: 16 NFQEVALGYTKEM-AVDEAQRCLNCPKPRCVGSCPVNIDIPKFIHEVAQENFAEAYKILK 74
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP + C G C L E P+ IG L++F + ++ G+ +A
Sbjct: 75 QKSTLPAVCGRVCPQENQCEGKCVLGIKGE-PVAIGRLERFVADYAREHGLDN--DVEAP 131
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A++G GP+ L+CA L++MGY D+T+YE
Sbjct: 132 AERKGKKVAVVGSGPSGLTCAGDLAKMGY-DVTMYE 166
>gi|409437962|ref|ZP_11265061.1| putative Fe-S cluster containing oxidoreductase subunit [Rhizobium
mesoamericanum STM3625]
gi|408750428|emb|CCM76221.1| putative Fe-S cluster containing oxidoreductase subunit [Rhizobium
mesoamericanum STM3625]
Length = 453
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ N G+AK I
Sbjct: 20 SNFSDL-HPRLDKHEALVAADRCYFCYDAPCMAACPTSIDIPLFIRQIATGNPMGSAKTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE 124
F N LG C VCPT DLC C AEE P+ IG LQ++AT+
Sbjct: 79 FDQNILGGMCARVCPTEDLCEQACVRNTAEERPVEIGRLQRYATD 123
>gi|419720225|ref|ZP_14247468.1| glutamate synthase (NADPH), homotetrameric [Lachnoanaerobaculum
saburreum F0468]
gi|383303593|gb|EIC95035.1| glutamate synthase (NADPH), homotetrameric [Lachnoanaerobaculum
saburreum F0468]
Length = 465
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ S+ A+ EA+RC C +A C K CP I+I +FI I N GA+ I
Sbjct: 22 NFDEV-CLGYSKEEAMAEATRCFNCKNAKCIKGCPVSINIPAFIQEILKDNIEGASDVIA 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + ++IG L+++ + + MGI P A
Sbjct: 81 QSSSLPAVCGRVCPQETQCEGVC-IRGNRGEAVSIGKLERYVADTARKMGIK----PKAN 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A+IG GPA LSCA L+++GY ++TI+E
Sbjct: 136 PNKNGKRVAVIGSGPAGLSCAGDLAKLGY-EVTIFE 170
>gi|153938474|ref|YP_001392649.1| oxidoreductase [Clostridium botulinum F str. Langeland]
gi|384463617|ref|YP_005676212.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum F
str. 230613]
gi|152934370|gb|ABS39868.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum F
str. Langeland]
gi|295320634|gb|ADG01012.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum F
str. 230613]
Length = 460
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|148381247|ref|YP_001255788.1| oxidoreductase [Clostridium botulinum A str. ATCC 3502]
gi|153932915|ref|YP_001385622.1| oxidoreductase [Clostridium botulinum A str. ATCC 19397]
gi|153934928|ref|YP_001389028.1| oxidoreductase [Clostridium botulinum A str. Hall]
gi|148290731|emb|CAL84862.1| putative pyridine nucleotide-disulphide oxidoreductase [Clostridium
botulinum A str. ATCC 3502]
gi|152928959|gb|ABS34459.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum A
str. ATCC 19397]
gi|152930842|gb|ABS36341.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum A
str. Hall]
Length = 461
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|170755584|ref|YP_001782927.1| oxidoreductase [Clostridium botulinum B1 str. Okra]
gi|429244122|ref|ZP_19207603.1| dihydropyrimidine dehydrogenase subunit A [Clostridium botulinum
CFSAN001628]
gi|169120796|gb|ACA44632.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
B1 str. Okra]
gi|428758847|gb|EKX81239.1| dihydropyrimidine dehydrogenase subunit A [Clostridium botulinum
CFSAN001628]
Length = 461
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|168179049|ref|ZP_02613713.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
NCTC 2916]
gi|421839527|ref|ZP_16273080.1| dihydropyrimidine dehydrogenase subunit A [Clostridium botulinum
CFSAN001627]
gi|182669917|gb|EDT81893.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
NCTC 2916]
gi|409734195|gb|EKN36011.1| dihydropyrimidine dehydrogenase subunit A [Clostridium botulinum
CFSAN001627]
Length = 461
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|315651972|ref|ZP_07904974.1| glutamate synthase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485801|gb|EFU76181.1| glutamate synthase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 465
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ S+ A+ EA+RC C +A C K CP I+I +FI I N GA+ I
Sbjct: 22 NFDEV-CLGYSKEEAMAEATRCFNCKNAKCIKGCPVSINIPAFIQEILKDNIEGASDVIA 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + ++IG L+++ + + MGI P A
Sbjct: 81 QSSSLPAVCGRVCPQETQCEGVC-IRGNRGEAVSIGKLERYVADTARKMGIK----PKAN 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A+IG GPA LSCA L+++GY ++TI+E
Sbjct: 136 PNKNGKRVAVIGSGPAGLSCAGDLAKLGY-EVTIFE 170
>gi|134298935|ref|YP_001112431.1| putative oxidoreductase [Desulfotomaculum reducens MI-1]
gi|134051635|gb|ABO49606.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Desulfotomaculum
reducens MI-1]
Length = 468
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ +E AL EA RCLKC + C K CP +DI FI + + Y AAK I
Sbjct: 22 KNFDEVA-LGYTEELALAEAERCLKCKNPMCMKGCPVSVDIPEFIAHVKERKYEEAAKVI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPP 137
N L CG VCP + C C + E P+ IG L++F + V K+ I
Sbjct: 81 KRTNALPAVCGRVCPQENQCEKFCIVGKKNE-PVAIGRLERFVGDYMVNKEAEIE----- 134
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A++G GPA L+CA L+R+G+ +T++E
Sbjct: 135 --KAEATGYKVAIVGSGPAGLACAADLARLGH-SVTMFE 170
>gi|168182071|ref|ZP_02616735.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
Bf]
gi|237796744|ref|YP_002864296.1| putative oxidoreductase [Clostridium botulinum Ba4 str. 657]
gi|182674754|gb|EDT86715.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
Bf]
gi|229261267|gb|ACQ52300.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
Ba4 str. 657]
Length = 461
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|226950729|ref|YP_002805820.1| putative oxidoreductase [Clostridium botulinum A2 str. Kyoto]
gi|226841683|gb|ACO84349.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
A2 str. Kyoto]
Length = 460
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|270294264|ref|ZP_06200466.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275731|gb|EFA21591.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 766
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 334 LTKEQALTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 393
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + K+A
Sbjct: 394 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISIPEIK-EKNGIKVA 450
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 451 VIGSGPAGLSFAGDMAKYGY-DVTVFE 476
>gi|423301996|ref|ZP_17280019.1| glutamate synthase (NADPH), homotetrameric [Bacteroides finegoldii
CL09T03C10]
gi|408471087|gb|EKJ89619.1| glutamate synthase (NADPH), homotetrameric [Bacteroides finegoldii
CL09T03C10]
Length = 766
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIEREEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P D KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIADKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKFGY-DVTVFE 472
>gi|389852550|ref|YP_006354784.1| gltB-1 glutamate synthase small chain [Pyrococcus sp. ST04]
gi|388249856|gb|AFK22709.1| putative gltB-1 glutamate synthase small chain [Pyrococcus sp.
ST04]
Length = 475
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 12/152 (7%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISH------KNYYGAAKAIFSDNPLG 86
ALKEA RCL+C APC K CP IDI FI ++ K A K I++ N L
Sbjct: 35 ALKEAERCLQCPKEYAPCIKGCPVNIDIPGFIGALRKYRDDPDKAVKEALKIIWACNSLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFP 144
G VCP D C G C + + P+NIG L++F + ++ GI +R ++
Sbjct: 95 AITGRVCPQEDQCEGVCVVGKVGD-PVNIGKLERFVADYAREKGIEDELLREQVGEIKKN 153
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++MGY ++TI+E
Sbjct: 154 GKKVAVIGAGPAGLTCAAELAKMGY-EVTIFE 184
>gi|423305486|ref|ZP_17283485.1| glutamate synthase (NADPH), homotetrameric [Bacteroides uniformis
CL03T00C23]
gi|423311304|ref|ZP_17289273.1| glutamate synthase (NADPH), homotetrameric [Bacteroides uniformis
CL03T12C37]
gi|392679351|gb|EIY72736.1| glutamate synthase (NADPH), homotetrameric [Bacteroides uniformis
CL03T12C37]
gi|392681187|gb|EIY74548.1| glutamate synthase (NADPH), homotetrameric [Bacteroides uniformis
CL03T00C23]
Length = 766
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ AL EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 334 LTKEQALTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 393
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P+ K + K+A
Sbjct: 394 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISIPEIK-EKNGIKVA 450
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 451 VIGSGPAGLSFAGDMAKYGY-DVTVFE 476
>gi|389851457|ref|YP_006353691.1| oxidoreductase [Pyrococcus sp. ST04]
gi|388248763|gb|AFK21616.1| putative oxidoreductase [Pyrococcus sp. ST04]
Length = 476
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSI-SHK-NYYGAAK----AIFSDNPLG 86
ALKEA RCL+C APC K CP IDI FI + HK N Y A K I++ N L
Sbjct: 35 ALKEAERCLQCPKEYAPCIKGCPVHIDIPGFIAKLREHKDNPYLAVKEALRVIWACNSLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFP 144
G VCP D C G C + + P+NIG L++F + ++ GI + K+
Sbjct: 95 AITGRVCPQEDQCEGVCVVGKVGD-PVNIGKLERFVADYARERGIDDELLMEEVPKIQKN 153
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++MGY ++TI+E
Sbjct: 154 GKKVAVIGAGPAGLTCAAELAKMGY-EVTIFE 184
>gi|424896660|ref|ZP_18320234.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393180887|gb|EJC80926.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 453
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S NF D+ H L AL A RC C DAPC +CPT IDI FI IS N
Sbjct: 13 LSSAEYEANFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNP 71
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+AK IF N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 72 IGSAKTIFDQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG-- 129
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
R A+ + IA++G GPA L+ A L+ G+ +TIY+
Sbjct: 130 --RQFYARAEASGKTIAVVGAGPAGLAAAHRLAVKGH-SVTIYD 170
>gi|238018360|ref|ZP_04598786.1| hypothetical protein VEIDISOL_00185 [Veillonella dispar ATCC 17748]
gi|237864831|gb|EEP66121.1| hypothetical protein VEIDISOL_00185 [Veillonella dispar ATCC 17748]
Length = 450
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+H N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIAHGNFGLANDILAERTNLPSICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY D+T++E
Sbjct: 135 PAGLSVAGDIAKLGY-DVTVFE 155
>gi|424835125|ref|ZP_18259795.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium sporogenes PA 3679]
gi|365978252|gb|EHN14344.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium sporogenes PA 3679]
Length = 438
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP D FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTDPGKFIRSLRFRNFKGAVTTIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ T+ + +GI + A K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGKLQRYLTDYEQSIGIKALEAIKA----TKEKVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY IT++E
Sbjct: 135 PSGLAAAAELALEGY-KITVFE 155
>gi|399036976|ref|ZP_10733914.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium sp. CF122]
gi|398065436|gb|EJL57069.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium sp. CF122]
Length = 453
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF D+ H L + AL A RC C DAPC +CPT IDI FI I+ N G+AK I
Sbjct: 20 SNFSDL-HPRLDKHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQIATGNPLGSAKTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE 124
F N LG C VCPT +LC C AEE P+ IG LQ+FAT+
Sbjct: 79 FDQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRFATD 123
>gi|187778597|ref|ZP_02995070.1| hypothetical protein CLOSPO_02192 [Clostridium sporogenes ATCC
15579]
gi|187772222|gb|EDU36024.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium
sporogenes ATCC 15579]
Length = 431
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP D FI S+ +N+ GA I +N LG C VCP
Sbjct: 13 AIEEASRCLLCHDAPCTKACPAGTDPGKFIRSLRFRNFKGAVATIRENNILGGVCARVCP 72
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ T+ + +GI + A + K+A+IG G
Sbjct: 73 TDKYCEGACSRCGIDK-PIQIGKLQRYLTDYEQSIGIEALEAIKATKE----KVAIIGSG 127
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY IT++E
Sbjct: 128 PSGLAAAAELALEGY-KITVFE 148
>gi|332159197|ref|YP_004424476.1| putative oxidoreductase [Pyrococcus sp. NA2]
gi|331034660|gb|AEC52472.1| putative oxidoreductase [Pyrococcus sp. NA2]
Length = 475
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 12/152 (7%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISH------KNYYGAAKAIFSDNPLG 86
ALKEA RCL+C APC K CP IDI FI ++ K A K I++ N L
Sbjct: 35 ALKEAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENKDDPDKAVREALKIIWASNSLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFP 144
G VCP + C G C + + PINIG L++F + ++ GI +R +
Sbjct: 95 AITGRVCPQEEQCEGVCVVGKVGD-PINIGKLERFVADYAREHGIEDELLREEIKGIKKN 153
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A+IG GPA L+CA L++MGY ++TI+E
Sbjct: 154 GKRVAVIGAGPAGLTCAAELAKMGY-EVTIFE 184
>gi|315231285|ref|YP_004071721.1| glutamate synthase [Thermococcus barophilus MP]
gi|315184313|gb|ADT84498.1| glutamate synthase [Thermococcus barophilus MP]
Length = 480
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 99/192 (51%), Gaps = 28/192 (14%)
Query: 2 PEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQID 59
PE+ + I F +L NFD AL EA RCL+C + APC K CP I+
Sbjct: 14 PERPAYERIKSFEEVNLGYNFDL----------ALMEAERCLQCPENYAPCIKGCPVNIN 63
Query: 60 IKSFITSI-SHK-NYYGAAK----AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPI 113
I F+ + H+ N Y A K I++ N L G VCP D C G C + + PI
Sbjct: 64 IPGFLAKLKEHRDNPYLAVKEALRVIWACNSLPAITGRVCPQEDQCEGVCVMGKVGD-PI 122
Query: 114 NIGGLQQFATEVFKDMGIS-----QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMG 168
NIG L++F + + GI +I P K++ + K+A++G GPA L+CA L++MG
Sbjct: 123 NIGKLERFVADYARLHGIDDELLMEIIP---KIEKKEQKVAVVGAGPAGLTCAAELAKMG 179
Query: 169 YDDITIYEKNTY 180
Y +TI+E Y
Sbjct: 180 Y-KVTIFEALHY 190
>gi|218682359|ref|ZP_03529960.1| putative oxidoreductase [Rhizobium etli CIAT 894]
Length = 255
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPLGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|390935183|ref|YP_006392688.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|169247681|gb|ACA51675.1| ferredoxin NAD(P) oxidoreductase subunit alpha
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570684|gb|AFK87089.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 463
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 13/159 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA RC++C + PC + CP + I FI I+++++ GA + I
Sbjct: 22 NFKEVA-LGYEENMAVEEAERCIQCKNQPCVEGCPVHVKIPEFIKLIANRDFEGAYQKIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C E P+ IG L++F + ++ + K
Sbjct: 81 ETNNLPAICGRVCPQESQCESVCTRGKKGE-PVAIGRLERFTAD-------WHMKNNEDK 132
Query: 141 VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ P+T K+A+IG GPA LSCA L++MGY D TI+E
Sbjct: 133 IEKPETNGRKVAVIGSGPAGLSCAGDLAKMGY-DTTIFE 170
>gi|429246801|ref|ZP_19210098.1| oxidoreductase [Clostridium botulinum CFSAN001628]
gi|428756164|gb|EKX78739.1| oxidoreductase [Clostridium botulinum CFSAN001628]
Length = 460
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + KIA+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKIAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|190893105|ref|YP_001979647.1| oxidoreductase [Rhizobium etli CIAT 652]
gi|190698384|gb|ACE92469.1| probable NADPH-dependent glutamate synthase protein, small chain
[Rhizobium etli CIAT 652]
Length = 453
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPLGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ +G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQVG 129
>gi|167038125|ref|YP_001665703.1| glutamate synthase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116534|ref|YP_004186693.1| glutamate synthase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856959|gb|ABY95367.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929625|gb|ADV80310.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 463
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ +E A+ EASRC++C C CP + I FI +I+ + + A K
Sbjct: 18 IKNFNEV-ALGYTEEEAILEASRCIQCPKPTCVAGCPVHVRIPEFIKAITKREFEEAYKI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I S N L CG VCP + C C L + PI IG L++F + I + P+
Sbjct: 77 IKSTNSLPAVCGRVCPQEEQCEKNCVLNKIGK-PIAIGRLERFVADYALQNNIEEEVKPE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 136 KK----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|304316616|ref|YP_003851761.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778118|gb|ADL68677.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 463
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA RC++C + PC CP + I FI I+++N+ GA + I
Sbjct: 22 NFKEVA-LGYEENMAVEEAERCIQCKNQPCVSGCPVHVQIPDFIKQIANRNFEGAYQKIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C E P+ IG L++FA + +R + K
Sbjct: 81 ETNNLPAICGRVCPQESQCESVCTRGKKGE-PVAIGRLERFAAD-------WHMRNKEDK 132
Query: 141 VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYE 176
V+ K+A+IG GPA LSCA L++MGY D TI+E
Sbjct: 133 VEALKKNGRKVAVIGSGPAGLSCAGDLAKMGY-DTTIFE 170
>gi|424885676|ref|ZP_18309287.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393177438|gb|EJC77479.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 453
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNALGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCERACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|189174469|gb|ACD81472.1| glutamate synthase small subunit-like protein II [Pyrococcus
horikoshii]
Length = 476
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQIDIKSFITSIS------HK 70
+ +FD++ E ALKEA RCL+C APC K CP I+I FI ++ K
Sbjct: 20 IKDFDEVNLGYTWEL-ALKEAERCLQCPVEYAPCIKGCPVNINIPGFIKALRENKDNPRK 78
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
A + I++ N L G VCP D C G C + + P+NIG L++F + + G
Sbjct: 79 AVKEALRVIWACNSLPAITGRVCPQEDQCEGACVVGKVGD-PVNIGKLERFVADYARQHG 137
Query: 131 ISQ--IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
I + + K+A+IG GPA L+CA L++MGY D+TIYE
Sbjct: 138 IDDELLMEEIKNIKMNGKKVAVIGAGPAGLTCAAELAKMGY-DVTIYE 184
>gi|170755129|ref|YP_001781278.1| oxidoreductase [Clostridium botulinum B1 str. Okra]
gi|169120341|gb|ACA44177.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
B1 str. Okra]
Length = 460
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + KIA+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKIAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|21226766|ref|NP_632688.1| oxidoreductase [Methanosarcina mazei Go1]
gi|452209244|ref|YP_007489358.1| Glutamate synthase [NADPH] small chain [Methanosarcina mazei Tuc01]
gi|20905059|gb|AAM30360.1| glutamate synthase (NADPH) [Methanosarcina mazei Go1]
gi|452099146|gb|AGF96086.1| Glutamate synthase [NADPH] small chain [Methanosarcina mazei Tuc01]
Length = 469
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 20/178 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + F +L +D AL EASRCL C + C + CP +DI
Sbjct: 19 MPEQPAGERRKNFNEVALGYTKED----------ALAEASRCLACKEPKCVEGCPVNVDI 68
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI I +N+ GA + I + N L CG VCP C C L + P+ IG L++
Sbjct: 69 PGFIQLICEENFEGAIERIKATNALPAICGRVCPQESQCEAHCVLGKKGQ-PVAIGRLER 127
Query: 121 FATEVFKDMGIS--QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + ++ G+ Q+ PP K ++A++G GPA L+ A L+++G+ +TI+E
Sbjct: 128 FCADYEREKGVKSPQVMPPTGK------RVAVVGSGPAGLTAAADLAKLGH-KVTIFE 178
>gi|331270383|ref|YP_004396875.1| glutamate synthase [Clostridium botulinum BKT015925]
gi|329126933|gb|AEB76878.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
BKT015925]
Length = 460
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE A+ EA+RCL C + C K CP I+I FI + +K + AAK I + L CG
Sbjct: 29 SEEEAVAEANRCLNCKNPQCVKGCPVSINIPEFIEHVKNKEFEMAAKVIAKYSSLPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P++IG L++F + ++ I+ K + K+A+
Sbjct: 89 RVCPQETQCEGKCVLGIKGE-PVSIGKLERFVADWSRENNINLSETEKKK----NMKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GP+ L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPSGLTCAGDLAKKGY-DVTIFE 168
>gi|421593476|ref|ZP_16038032.1| dihydropyrimidine dehydrogenase subunit A [Rhizobium sp. Pop5]
gi|403700581|gb|EJZ17702.1| dihydropyrimidine dehydrogenase subunit A [Rhizobium sp. Pop5]
Length = 453
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S NF D+ H L AL A RC C DAPC +CPT IDI FI IS N
Sbjct: 13 LSSAEYEANFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNP 71
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
G+AK IF N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 72 LGSAKTIFDQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|402836332|ref|ZP_10884872.1| glutamate synthase (NADPH), homotetrameric [Mogibacterium sp. CM50]
gi|402271428|gb|EJU20672.1| glutamate synthase (NADPH), homotetrameric [Mogibacterium sp. CM50]
Length = 466
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ E A++EA RCL C PC CP + I FI ++ ++ A + I
Sbjct: 23 KNFDEVALGYTPEM-AMEEARRCLHCKHRPCVGGCPVNVPIPEFIEKVAEGDFDAAYEVI 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+N L CG VCP D C G C + + P+ IG +++F + G I P+
Sbjct: 82 TRENALPAICGRVCPQEDQCEGRC-VRGLKGEPVGIGRMERFVADYHMSKGC--ITTPE- 137
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IGCGP+ ++CA L+R GY D+T++E
Sbjct: 138 -IEKNGIKVAVIGCGPSGITCAGELARRGY-DVTVFE 172
>gi|170760874|ref|YP_001788620.1| oxidoreductase [Clostridium botulinum A3 str. Loch Maree]
gi|169407863|gb|ACA56274.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
A3 str. Loch Maree]
Length = 461
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A+ EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIGEAKRCLHCKKPMCVGECPVSVNIPEFIEHIKEGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C G C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCEGKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|326389680|ref|ZP_08211246.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus JW 200]
gi|345017033|ref|YP_004819386.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
wiegelii Rt8.B1]
gi|325994395|gb|EGD52821.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
ethanolicus JW 200]
gi|344032376|gb|AEM78102.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 463
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ +E A+ EASRC++C C CP + I FI +I+ + + A K I
Sbjct: 19 KNFNEV-ALGYTEEEAIAEASRCIQCPKPTCVAGCPVHVRIPEFIKAITKREFEEAYKII 77
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N L CG VCP + C C L + PI IG L++F + I + P+
Sbjct: 78 KSTNSLPAVCGRVCPQEEQCEKNCVLNKIGK-PIAIGRLERFVADYALQNNIEEEVKPEK 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 137 K----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|218661281|ref|ZP_03517211.1| putative oxidoreductase [Rhizobium etli IE4771]
Length = 271
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G R +
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG----RQFYVR 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
D IA++G GPA L+ A L+ G+ +TIY+
Sbjct: 136 ADATGKNIAVVGAGPAGLAAAHRLAVKGH-SVTIYD 170
>gi|168184703|ref|ZP_02619367.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
Bf]
gi|237794986|ref|YP_002862538.1| putative oxidoreductase [Clostridium botulinum Ba4 str. 657]
gi|182672226|gb|EDT84187.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
Bf]
gi|229263004|gb|ACQ54037.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
Ba4 str. 657]
Length = 460
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|198276021|ref|ZP_03208552.1| hypothetical protein BACPLE_02205 [Bacteroides plebeius DSM 17135]
gi|198271650|gb|EDY95920.1| glutamate synthase (NADPH), homotetrameric [Bacteroides plebeius
DSM 17135]
Length = 764
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LSE AL EA RCL CA+ C + CP IDI F+ +I + AA+ + + L C
Sbjct: 331 LSEEQALTEAKRCLDCANPSCMEGCPVGIDIPGFVKNIERGEFLEAARTLKKTSALPAVC 390
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C + IG L++FA + ++ G QI P+ KIA
Sbjct: 391 GRVCPQEKQCESKCIHLKMGHEAVAIGYLERFAADYERESG--QISVPEIAAK-NGIKIA 447
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
++G GPA LS A +++MGY D+T++E
Sbjct: 448 VVGSGPAGLSFAGDMAKMGY-DVTVFE 473
>gi|153939058|ref|YP_001390982.1| oxidoreductase [Clostridium botulinum F str. Langeland]
gi|168180302|ref|ZP_02614966.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
NCTC 2916]
gi|421836400|ref|ZP_16270895.1| oxidoreductase [Clostridium botulinum CFSAN001627]
gi|152934954|gb|ABS40452.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum F
str. Langeland]
gi|182668840|gb|EDT80818.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
NCTC 2916]
gi|409741727|gb|EKN41418.1| oxidoreductase [Clostridium botulinum CFSAN001627]
Length = 460
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|392940353|ref|ZP_10305997.1| LOW QUALITY PROTEIN: NADPH-dependent glutamate synthase,
homotetrameric [Thermoanaerobacter siderophilus SR4]
gi|392292103|gb|EIW00547.1| LOW QUALITY PROTEIN: NADPH-dependent glutamate synthase,
homotetrameric [Thermoanaerobacter siderophilus SR4]
Length = 463
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ +E A+ EASRC++C C CP + I FI +I+ + + A K I
Sbjct: 19 KNFNEV-ALGYTEEEAIAEASRCIQCPKPTCVAGCPVHVRIPEFIKAITKREFEEAYKII 77
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N L CG VCP + C C L + PI IG L++F + I + P+
Sbjct: 78 KSTNSLPAVCGRVCPQEEQCEKNCVLNKIGK-PIAIGRLERFVADYALQNNIEEEVKPEK 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L +MGY D+TI+E
Sbjct: 137 K----NKKVAIIGGGPAGLTCAGDLLKMGY-DVTIFE 168
>gi|384462024|ref|YP_005674619.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum F
str. 230613]
gi|295319041|gb|ADF99418.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum F
str. 230613]
Length = 455
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|405377661|ref|ZP_11031600.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium sp. CF142]
gi|397325788|gb|EJJ30114.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium sp. CF142]
Length = 453
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S NF D+ H L AL A RC C DAPC +CPT IDI FI IS N
Sbjct: 13 LSSAEYEANFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNP 71
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE 124
G+AK IF N LG C VCPT +LC C AEE P+ IG LQ++AT+
Sbjct: 72 IGSAKTIFDQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATD 123
>gi|269119419|ref|YP_003307596.1| glutamate synthase (NADPH), homotetrameric [Sebaldella termitidis
ATCC 33386]
gi|268613297|gb|ACZ07665.1| glutamate synthase (NADPH), homotetrameric [Sebaldella termitidis
ATCC 33386]
Length = 761
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF ++ E A++EA+RCL C + C +CP + I FI + N+ AA+
Sbjct: 318 VTNFSEVSLGYTKEL-AMQEATRCLNCKNPRCVDNCPVNVQIPQFIMEVKAGNFEKAAEI 376
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP D C G C + E P+ IG L++F + ++ I+
Sbjct: 377 ILETNALPAVCGRVCPQEDQCEGSCVVGIKNE-PVGIGRLERFVADYVREKNITF----P 431
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+K+ K+A+IG GP+ ++CA L++ GY D+TI+E
Sbjct: 432 SKIVKNGKKVAVIGSGPSGIACAGDLAKSGY-DVTIFE 468
>gi|374294569|ref|YP_005044760.1| NADPH-dependent glutamate synthase, homotetrameric [Clostridium
clariflavum DSM 19732]
gi|359824063|gb|AEV66836.1| NADPH-dependent glutamate synthase, homotetrameric [Clostridium
clariflavum DSM 19732]
Length = 464
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A +EA RCL+C PC + CP + I FI ++ + A + I N L CG
Sbjct: 31 TEEMAKEEAQRCLQCKHRPCVEGCPVNVQIPDFIKLVAEGRFEEAYEKITETNSLPAICG 90
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C C + + P+ IG L++FA + + ++ +P + K++ + K+A+
Sbjct: 91 RVCPQETQCEKLC-VRGKKGEPVGIGRLERFAADWY----MANAKPKEVKIEKLNKKVAV 145
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA ++CA L++MGY D+TI+E
Sbjct: 146 IGSGPAGITCAGDLAKMGY-DVTIFE 170
>gi|167754119|ref|ZP_02426246.1| hypothetical protein ALIPUT_02412 [Alistipes putredinis DSM 17216]
gi|167658744|gb|EDS02874.1| glutamate synthase (NADPH), homotetrameric [Alistipes putredinis
DSM 17216]
Length = 464
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E L EASRCL C + C +CP I I FI + N+ AA I
Sbjct: 21 NFEEVCYGYNVEEATL-EASRCLNCKNPRCVAACPVNIRIPDFIHQVVEGNFAAAAAVIS 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
D+ L CG VCP C G C L E P+ IG L++F + +K ++ PD K
Sbjct: 80 EDSSLPSVCGRVCPQESQCEGSCVLGVKGE-PVAIGKLERFVGD-WKIENADKMPAPDIK 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GP+ L+CA+ L+RMGY ++ I+E
Sbjct: 138 RN--GHKVAVIGSGPSGLACASDLARMGY-EVKIFE 170
>gi|238916848|ref|YP_002930365.1| oxidoreductase [Eubacterium eligens ATCC 27750]
gi|238872208|gb|ACR71918.1| glutamate synthase (NADPH) [Eubacterium eligens ATCC 27750]
Length = 465
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E A++EA+RCL C +A C + CP IDI +FI + N A K I
Sbjct: 24 NFDEVCLGYNKEE-AMEEATRCLNCKNARCVQGCPVSIDIPAFIHQVKEGNIEEAYKIIG 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + ++IG L++F + ++ + +P + K
Sbjct: 83 KSSALPAVCGRVCPQETQCEGQC-IRGIKGESVSIGKLERFVADWARENNVEPEKPTEKK 141
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GP+ L+CA L++MGY D+TI+E
Sbjct: 142 ----GKKVAVIGSGPSGLTCAGDLAKMGY-DVTIFE 172
>gi|417099682|ref|ZP_11959877.1| putative NADPH-dependent glutamate synthase protein, small chain
[Rhizobium etli CNPAF512]
gi|327192568|gb|EGE59518.1| putative NADPH-dependent glutamate synthase protein, small chain
[Rhizobium etli CNPAF512]
Length = 453
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPLGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|187779132|ref|ZP_02995605.1| hypothetical protein CLOSPO_02727 [Clostridium sporogenes ATCC
15579]
gi|187772757|gb|EDU36559.1| glutamate synthase (NADPH), homotetrameric [Clostridium sporogenes
ATCC 15579]
Length = 460
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|153953097|ref|YP_001393862.1| oxidoreductase [Clostridium kluyveri DSM 555]
gi|219853748|ref|YP_002470870.1| hypothetical protein CKR_0405 [Clostridium kluyveri NBRC 12016]
gi|146345978|gb|EDK32514.1| Glutamate synthase-related protein [Clostridium kluyveri DSM 555]
gi|219567472|dbj|BAH05456.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 463
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ +E A++EASRCL C C CP I I FI I +K++ AAK I
Sbjct: 22 NFDEV-CLGYTEEEAVQEASRCLNCKKPGCVSKCPVSISIPQFIEQIKNKDFEAAAKVIA 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPD 138
+ L CG VCP C C L E I IG L++F + + D+ +S P
Sbjct: 81 KSSALPAVCGRVCPQESQCESKCVLGIKGEA-IAIGKLERFVADWSRENDIDLSDKEAPK 139
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GP+ L+CA L+++GY D+TI+E
Sbjct: 140 GK------KVAVIGSGPSGLTCAGDLAKLGY-DVTIFE 170
>gi|335047006|ref|ZP_08540029.1| glutamate synthase (NADPH), homotetrameric [Oribacterium sp. oral
taxon 108 str. F0425]
gi|363897882|ref|ZP_09324420.1| glutamate synthase, homotetrameric [Oribacterium sp. ACB7]
gi|333760792|gb|EGL38349.1| glutamate synthase (NADPH), homotetrameric [Oribacterium sp. oral
taxon 108 str. F0425]
gi|361958347|gb|EHL11649.1| glutamate synthase, homotetrameric [Oribacterium sp. ACB7]
Length = 462
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E+ A++EA RCL C + C CP I I FI + N+ AA+ I + L CG
Sbjct: 30 TEKEAMEEAVRCLNCRNPKCVVGCPVSIQINEFIHEVKEGNFEKAAEVIARSSALPAVCG 89
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGI--SQIRPPDAKVDFPDTKI 148
VCP C G C + + P+ IG L++F + ++ G +Q P+ K K+
Sbjct: 90 RVCPQETQCEGVC-IRGIKGEPVAIGKLERFVADWAREHGFQAAQAGAPNGK------KV 142
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GPA L+CA L+++GY D+TI+E
Sbjct: 143 AVIGAGPAGLTCAGDLAKLGY-DVTIFE 169
>gi|357027535|ref|ZP_09089608.1| dihydropyrimidine dehydrogenase subunit A [Mesorhizobium amorphae
CCNWGS0123]
gi|355540515|gb|EHH09718.1| dihydropyrimidine dehydrogenase subunit A [Mesorhizobium amorphae
CCNWGS0123]
Length = 454
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S +NF D+ H L AL E+ RC C DAPC +CPT IDI FI IS N
Sbjct: 15 LSSEQYADNFSDL-HPPLDHHEALVESDRCYFCYDAPCMNACPTSIDIPLFIRQISTGNP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
G+AK IF N LG C VCPT LC C AE P+ IG LQ++AT D+ +S
Sbjct: 74 IGSAKTIFDQNILGGMCARVCPTETLCEEVCVREVAEGKPVQIGRLQRYAT----DVAMS 129
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + + + IA++G GPA L+ A L+R G+ D+TI E
Sbjct: 130 ENKQFYPRPEPTGRSIAVVGAGPAGLAAAHRLARHGH-DVTILE 172
>gi|427412731|ref|ZP_18902923.1| glutamate synthase (NADPH), homotetrameric [Veillonella ratti
ACS-216-V-Col6b]
gi|425715547|gb|EKU78533.1| glutamate synthase (NADPH), homotetrameric [Veillonella ratti
ACS-216-V-Col6b]
Length = 467
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFS 81
DD +T L E AL EA RCL CA C+ CP + +I FI +I+ N+ A I
Sbjct: 30 LDDADYT-LEE--ALAEAKRCLNCAKPLCRTGCPIENEIPRFIQAIARGNFGEANDIIGE 86
Query: 82 DNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKV 141
+ L CG VCP C G C L A + PINIG L++FA + G+ +++P +
Sbjct: 87 RSNLPAVCGRVCPREKQCEGHCILNRANK-PINIGKLERFAADFESLHGLRRMKP----I 141
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
KI +IG GPA L+ A+ ++++GY ++TI+EK
Sbjct: 142 IKDQGKIGIIGSGPAGLTVASDMAKLGY-EVTIFEKQ 177
>gi|402488809|ref|ZP_10835616.1| dihydropyrimidine dehydrogenase subunit A [Rhizobium sp. CCGE 510]
gi|401812276|gb|EJT04631.1| dihydropyrimidine dehydrogenase subunit A [Rhizobium sp. CCGE 510]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|347531636|ref|YP_004838399.1| putative oxidoreductase [Roseburia hominis A2-183]
gi|345501784|gb|AEN96467.1| putative oxidoreductase [Roseburia hominis A2-183]
Length = 461
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA+RCL C +A C K CP I+I +FI + N+ A I + L CG VCP
Sbjct: 33 AMAEATRCLNCKNAQCMKGCPVSINIPAFIAQVKEGNFEEAYHIISESSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + + + IG L++F + ++ GI P K+A+IG G
Sbjct: 93 QENQCEGKC-IRGIKGEAVAIGKLERFVADWAREHGIK----PKKAEKLNGHKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L+++GY D+TI+E
Sbjct: 148 PAGLTCAGDLAKLGY-DVTIFE 168
>gi|347818634|ref|ZP_08872068.1| glutamate synthase subunit beta, partial [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 150
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L+ AL EA RC C DAPC +CPT ID+ SFI I+ N GAA+AI
Sbjct: 24 NFGDV-HAPLTRPQALIEAERCYYCHDAPCTTACPTGIDVPSFIQRIAQGNERGAARAIL 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF 126
NPLG C VCPT LC C + P+ IG LQ++AT+
Sbjct: 83 QANPLGGICARVCPTEVLCEQVCVRNTHGDKPVEIGALQRYATDAL 128
>gi|254975094|ref|ZP_05271566.1| putative oxidoreductase [Clostridium difficile QCD-66c26]
gi|255092483|ref|ZP_05321961.1| putative oxidoreductase [Clostridium difficile CIP 107932]
gi|255314222|ref|ZP_05355805.1| putative oxidoreductase [Clostridium difficile QCD-76w55]
gi|255516900|ref|ZP_05384576.1| putative oxidoreductase [Clostridium difficile QCD-97b34]
gi|255650001|ref|ZP_05396903.1| putative oxidoreductase [Clostridium difficile QCD-37x79]
gi|260683152|ref|YP_003214437.1| oxidoreductase [Clostridium difficile CD196]
gi|260686750|ref|YP_003217883.1| oxidoreductase [Clostridium difficile R20291]
gi|384360742|ref|YP_006198594.1| putative oxidoreductase [Clostridium difficile BI1]
gi|260209315|emb|CBA62708.1| putative glutamate synthase [NADPH] small chain [Clostridium
difficile CD196]
gi|260212766|emb|CBE03904.1| putative glutamate synthase [NADPH] small chain [Clostridium
difficile R20291]
Length = 464
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E A+ EA+RCL C C CP IDI FIT I + GAAK I
Sbjct: 21 NFDEVCLGYNKEE-AMAEANRCLACKKPKCVGGCPVGIDIPGFITKIKEDDIEGAAKVIA 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPD 138
+ L CG VCP C G C + + ++IG L++F + K D+ +S P
Sbjct: 80 KSSSLPAVCGRVCPQESQCEGVC-ILGIKSDAVSIGKLERFVADWSKENDINLSDTEPKK 138
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 139 ------NQKVAVIGSGPAGLACAGDLAKKGY-DVTIFE 169
>gi|406877304|gb|EKD26573.1| hypothetical protein ACD_79C01117G0003 [uncultured bacterium]
Length = 469
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
+E AL EA RCL+C +APC K CP +D+KSFI + K+Y GA I N L C
Sbjct: 30 FTEEEALIEAKRCLQCKNAPCIKGCPAGVDVKSFINFVKEKDYSGAIDKIKETNSLPGVC 89
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPPDAKVDFPDTK 147
G VCP + C C ++ PI IG L++F E+ +Q + ++ + K
Sbjct: 90 GRVCPQEEQCQVSC-VFNKTGHPIKIGYLERFVADWELANKKEFTQHKFSESPLS--KIK 146
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYE 176
+A+ G GPA L+CA L++ G+ ++ I+E
Sbjct: 147 VAIFGAGPAGLTCAADLAKSGF-EVHIFE 174
>gi|225019143|ref|ZP_03708335.1| hypothetical protein CLOSTMETH_03095 [Clostridium methylpentosum
DSM 5476]
gi|224948090|gb|EEG29299.1| hypothetical protein CLOSTMETH_03095 [Clostridium methylpentosum
DSM 5476]
Length = 463
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ T +E A++EA RCL C PC CP ++ I FI ++ ++ A + I
Sbjct: 21 KNFEEVA-TGYTEEMAMEEAKRCLNCKHKPCVSGCPVKVRIPEFIQCVAEGDFSKAYEVI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
S N L CG VCP C C + + P+ IG L++F + + G ++ P +
Sbjct: 80 TSTNSLPAVCGRVCPQESQCESKC-VRGIKGEPVAIGRLERFVADWYMKNGSDRVEKPAS 138
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L+++GY ++T++E
Sbjct: 139 N----GHKVAVIGAGPAGLTCAGDLAKLGY-EVTVFE 170
>gi|306520076|ref|ZP_07406423.1| putative oxidoreductase [Clostridium difficile QCD-32g58]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E A+ EA+RCL C C CP IDI FIT I + GAAK I
Sbjct: 21 NFDEVCLGYNKEE-AMAEANRCLACKKPKCVGGCPVGIDIPGFITKIKEDDIEGAAKVIA 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPD 138
+ L CG VCP C G C + + ++IG L++F + K D+ +S P
Sbjct: 80 KSSSLPAVCGRVCPQESQCEGVC-ILGIKSDAVSIGKLERFVADWSKENDINLSDTEPKK 138
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 139 ------NQKVAVIGSGPAGLACAGDLAKKGY-DVTIFE 169
>gi|302387270|ref|YP_003823092.1| glutamate synthase (NADPH), homotetrameric [Clostridium
saccharolyticum WM1]
gi|302197898|gb|ADL05469.1| glutamate synthase (NADPH), homotetrameric [Clostridium
saccharolyticum WM1]
Length = 462
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A +EASRC++C + C CP I+I FI + + N+ AAK I
Sbjct: 20 NFEEV-CLGYNEEEAKEEASRCIQCKNPKCVAGCPVSINIPGFIKEVENGNHEEAAKIIA 78
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + PI+IG L++F + ++ G P+A
Sbjct: 79 QSSALPAVCGRVCPQESQCEGKC-IRGIKGEPISIGKLERFVADWSREHGFV----PEAP 133
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GP+ L+CA L+++GY ++TI+E
Sbjct: 134 EKTNGKKVAVIGSGPSGLTCAGDLAKLGY-EVTIFE 168
>gi|424871979|ref|ZP_18295641.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393167680|gb|EJC67727.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|209550604|ref|YP_002282521.1| oxidoreductase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536360|gb|ACI56295.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDTAMQAG 129
>gi|424917136|ref|ZP_18340500.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392853312|gb|EJB05833.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDTAMQAG 129
>gi|170759000|ref|YP_001787049.1| oxidoreductase [Clostridium botulinum A3 str. Loch Maree]
gi|169405989|gb|ACA54400.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
A3 str. Loch Maree]
Length = 460
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKDKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|424883041|ref|ZP_18306673.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392519404|gb|EIW44136.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 453
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
N LG C VCPT +LC C AEE P+ IG LQ++AT+ G
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDAAMQAG 129
>gi|126699141|ref|YP_001088038.1| oxidoreductase [Clostridium difficile 630]
gi|255100568|ref|ZP_05329545.1| putative oxidoreductase [Clostridium difficile QCD-63q42]
gi|255306506|ref|ZP_05350677.1| putative oxidoreductase [Clostridium difficile ATCC 43255]
gi|255655557|ref|ZP_05400966.1| putative oxidoreductase [Clostridium difficile QCD-23m63]
gi|296451548|ref|ZP_06893283.1| possible glutamate synthase (NADPH) [Clostridium difficile NAP08]
gi|296878805|ref|ZP_06902805.1| possible glutamate synthase (NADPH) [Clostridium difficile NAP07]
gi|423083339|ref|ZP_17071884.1| glutamate synthase [Clostridium difficile 002-P50-2011]
gi|423088065|ref|ZP_17076449.1| glutamate synthase [Clostridium difficile 050-P50-2011]
gi|423090043|ref|ZP_17078386.1| glutamate synthase [Clostridium difficile 70-100-2010]
gi|115250578|emb|CAJ68402.1| putative glutamate synthase [Clostridium difficile 630]
gi|296259613|gb|EFH06473.1| possible glutamate synthase (NADPH) [Clostridium difficile NAP08]
gi|296430077|gb|EFH15924.1| possible glutamate synthase (NADPH) [Clostridium difficile NAP07]
gi|357543393|gb|EHJ25414.1| glutamate synthase [Clostridium difficile 050-P50-2011]
gi|357545690|gb|EHJ27655.1| glutamate synthase [Clostridium difficile 002-P50-2011]
gi|357557348|gb|EHJ38899.1| glutamate synthase [Clostridium difficile 70-100-2010]
Length = 464
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E A+ EA+RCL C C CP IDI FIT I + GAAK I
Sbjct: 21 NFDEVCLGYNKEE-AMAEANRCLACKKPKCVGGCPVGIDIPGFITKIKEDDIEGAAKVIA 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPD 138
+ L CG VCP C G C + + ++IG L++F + K D+ +S P
Sbjct: 80 KSSSLPAVCGRVCPQESQCEGVC-ILGIKSDAVSIGKLERFVADWSKENDINLSDTEPKK 138
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 139 ------NQKVAVIGSGPAGLACAGDLAKKGY-DVTIFE 169
>gi|148379606|ref|YP_001254147.1| oxidoreductase [Clostridium botulinum A str. ATCC 3502]
gi|153933600|ref|YP_001383984.1| oxidoreductase [Clostridium botulinum A str. ATCC 19397]
gi|153936605|ref|YP_001387528.1| oxidoreductase [Clostridium botulinum A str. Hall]
gi|226948972|ref|YP_002804063.1| putative oxidoreductase [Clostridium botulinum A2 str. Kyoto]
gi|148289090|emb|CAL83180.1| glutamate synthase [NADPH] small chain [Clostridium botulinum A
str. ATCC 3502]
gi|152929644|gb|ABS35144.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum A
str. ATCC 19397]
gi|152932519|gb|ABS38018.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum A
str. Hall]
gi|226844240|gb|ACO86906.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
A2 str. Kyoto]
Length = 460
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKDKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + ++K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREESK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|18978282|ref|NP_579639.1| oxidoreductase [Pyrococcus furiosus DSM 3638]
gi|397652441|ref|YP_006493022.1| oxidoreductase [Pyrococcus furiosus COM1]
gi|18894105|gb|AAL82034.1| glutamate synthase [Pyrococcus furiosus DSM 3638]
gi|393190032|gb|AFN04730.1| oxidoreductase [Pyrococcus furiosus COM1]
Length = 476
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISH------KNYYGAAKAIFSDNPLG 86
AL+EA RCL+C APC K CP I+I FI ++ K A + I+ DN L
Sbjct: 35 ALREAERCLQCPVEYAPCIKGCPVHINIPGFIKALRENRDNPSKAVREALRIIWRDNTLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS-QIRPPDAK-VDFP 144
G VCP + C G C + + PINIG L++F + ++ GI ++ + K +
Sbjct: 95 AITGRVCPQEEQCEGACVVGKVGD-PINIGKLERFVADYAREHGIDDELLLEEIKGIKRN 153
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++MGY ++TIYE
Sbjct: 154 GKKVAIIGAGPAGLTCAADLAKMGY-EVTIYE 184
>gi|337267954|ref|YP_004612009.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium opportunistum WSM2075]
gi|336028264|gb|AEH87915.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium opportunistum WSM2075]
Length = 451
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 1 MPEQSSLAGI--NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQI 58
MPE GI + +NF D+ H L AL E+ RC C DAPC +CPT I
Sbjct: 1 MPEGQFKEGIAGGRLQADQYADNFSDL-HPPLDHHEALVESDRCYFCYDAPCMNACPTSI 59
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
DI FI IS N G+AK IF N LG C VCPT LC C AE P+ IG L
Sbjct: 60 DIPLFIRQISTGNPIGSAKTIFDQNILGGMCARVCPTETLCEEVCVREVAEGKPVQIGRL 119
Query: 119 QQFATEV 125
Q++AT+V
Sbjct: 120 QRYATDV 126
>gi|153816444|ref|ZP_01969112.1| hypothetical protein RUMTOR_02697 [Ruminococcus torques ATCC 27756]
gi|317500197|ref|ZP_07958429.1| hypothetical protein HMPREF1026_00371 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087575|ref|ZP_08336505.1| glutamate synthase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336437996|ref|ZP_08617639.1| glutamate synthase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846232|gb|EDK23150.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus torques
ATCC 27756]
gi|316898412|gb|EFV20451.1| hypothetical protein HMPREF1026_00371 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400446|gb|EGG80079.1| glutamate synthase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336018371|gb|EGN48119.1| glutamate synthase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 464
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C +A C + CP IDI +FI + N A K I + L CG VCP
Sbjct: 34 AMEEASRCLNCKNAKCIQGCPVSIDIPAFIQEVKEGNIEEAYKVIGKSSALPAICGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F + D I+P A+ + K+A+IG G
Sbjct: 94 QESQCEGKC-IRGIKGEPVSIGKLERFVADYALD---HDIKPVGAE-EKNGHKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L+++GY D+T++E
Sbjct: 149 PSGLTCAGDLAKLGY-DVTVFE 169
>gi|333897372|ref|YP_004471246.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112637|gb|AEF17574.1| glutamate synthase (NADPH), homotetrameric [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 463
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA RC++C + PC + CP + I FI I+++++ GA + I
Sbjct: 22 NFKEVA-LGYEENMAVEEAERCIQCKNQPCVEGCPVHVKIPEFIKLIANRDFEGAYQKIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C E P+ IG L++FA + ++ + K
Sbjct: 81 ETNNLPAICGRVCPQESQCESVCTRGKKGE-PVAIGRLERFAAD-------WHMKNKEDK 132
Query: 141 VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ T K+A+IG GPA LSCA L++MGY D TI+E
Sbjct: 133 IEITATNGKKVAVIGSGPAGLSCAGDLAKMGY-DTTIFE 170
>gi|399888787|ref|ZP_10774664.1| oxidoreductase [Clostridium arbusti SL206]
Length = 460
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A+ EA+RCL+C + C CP I +FI I +++ AA
Sbjct: 18 IKNFDEV-CLGYNEEDAVNEANRCLQCKNPRCVGKCPVNNKIPAFIKCIRERDFKKAAAI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I + L CG VCP C GGC L E PI+IG L++F + ++ + +
Sbjct: 77 IAETSSLPAVCGRVCPQEVQCEGGCVLGIKGE-PISIGNLERFVADWCRENNVDF----N 131
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
KV+ K+A++G GPA ++CA L+++GY D+TI+E
Sbjct: 132 EKVESNGKKVAVVGSGPAGIACAGDLAKLGY-DVTIFE 168
>gi|188588170|ref|YP_001922177.1| putative oxidoreductase [Clostridium botulinum E3 str. Alaska E43]
gi|188498451|gb|ACD51587.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
E3 str. Alaska E43]
Length = 463
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A KEASRCL C + C + CP I+I FI+ I + AAK I + L CG
Sbjct: 32 NEEEAKKEASRCLNCKNPKCIEGCPVAINIPGFISHIKDNKFEDAAKEIAKYSALPAVCG 91
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPPDAKVDFPDTKI 148
VCP C G C L E P++IG L++F + ++ +S+ P + K KI
Sbjct: 92 RVCPQESQCEGKCVLGIKGE-PVSIGKLERFTADWSAEHNVDLSETAPSNGK------KI 144
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GP+ L+CA L++ GY D+TI+E
Sbjct: 145 AVIGSGPSGLTCAGDLAKKGY-DVTIFE 171
>gi|342214936|ref|ZP_08707606.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
sp. oral taxon 780 str. F0422]
gi|341590238|gb|EGS33484.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
sp. oral taxon 780 str. F0422]
Length = 444
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
K T+ E A EA RCL CA C+ CP + +I FI +I+H N+ A I + L
Sbjct: 11 KDYTMEE--AFAEAKRCLNCAKPLCRTGCPIENEIPRFIQAIAHGNFGLANDIIAERSSL 68
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD 145
CG VC C G C L A + PINIG L++FA + + + +I+P
Sbjct: 69 PAVCGRVCAREKQCEGACILNRANK-PINIGKLERFAADFESNNNLRKIKPNRKD----Q 123
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
KIA+IG GPA L+ A ++++GY D+T++E+
Sbjct: 124 GKIAIIGSGPAGLTVAGDMAKLGY-DVTVFERQ 155
>gi|251777783|ref|ZP_04820703.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243082098|gb|EES47988.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 463
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A KEASRCL C + C + CP I+I FI+ I + AAK I + L CG
Sbjct: 32 NEEEAKKEASRCLNCKNPKCIEGCPVAINIPGFISHIKDNKFEDAAKEIAKYSALPAVCG 91
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPPDAKVDFPDTKI 148
VCP C G C L E P++IG L++F + ++ +S+ P + K KI
Sbjct: 92 RVCPQESQCEGKCVLGIKGE-PVSIGKLERFTADWSAEHNVDLSETAPSNGK------KI 144
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GP+ L+CA L++ GY D+TI+E
Sbjct: 145 AVIGSGPSGLTCAGDLAKKGY-DVTIFE 171
>gi|187932828|ref|YP_001887234.1| oxidoreductase [Clostridium botulinum B str. Eklund 17B]
gi|187720981|gb|ACD22202.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum B
str. Eklund 17B]
Length = 463
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A KEASRCL C + C + CP I+I FI+ I + AAK I + L CG
Sbjct: 32 NEEEAKKEASRCLNCKNPKCIEGCPVAINIPGFISHIKDNKFEDAAKEIAKYSALPAVCG 91
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPPDAKVDFPDTKI 148
VCP C G C L E P++IG L++F + ++ +S+ P + K KI
Sbjct: 92 RVCPQESQCEGKCVLGIKGE-PVSIGKLERFTADWSAEHNVDLSETAPSNGK------KI 144
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GP+ L+CA L++ GY D+TI+E
Sbjct: 145 AVIGSGPSGLTCAGDLAKKGY-DVTIFE 171
>gi|18977699|ref|NP_579056.1| oxidoreductase [Pyrococcus furiosus DSM 3638]
gi|397651818|ref|YP_006492399.1| oxidoreductase [Pyrococcus furiosus COM1]
gi|74535904|sp|Q8U195.1|SUDHA_PYRFU RecName: Full=Sulfide dehydrogenase subunit alpha; Short=SuDH;
AltName: Full=Ferredoxin:NADP oxidoreductase;
Short=FNOR; Flags: Precursor
gi|18893431|gb|AAL81451.1| glutamate synthase [NADPH] small chain [Pyrococcus furiosus DSM
3638]
gi|393189409|gb|AFN04107.1| oxidoreductase [Pyrococcus furiosus COM1]
Length = 474
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISH------KNYYGAAKAIFSDNPLG 86
AL+EA RCL+C APC K CP I+I FI ++ K A + I+ DN L
Sbjct: 35 ALREAERCLQCPVEYAPCIKGCPVHINIPGFIKALRENRDNPSKAVREALRIIWRDNTLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS-QIRPPDAK-VDFP 144
G VCP + C G C + + PINIG L++F + ++ GI ++ + K +
Sbjct: 95 AITGRVCPQEEQCEGACVVGKVGD-PINIGKLERFVADYAREHGIDDELLLEEIKGIKRN 153
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++MGY ++TIYE
Sbjct: 154 GKKVAIIGAGPAGLTCAADLAKMGY-EVTIYE 184
>gi|116253447|ref|YP_769285.1| oxidoreductase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258095|emb|CAK09196.1| putative glutamate synthase like small subunit protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 453
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF D+ H L AL A RC C DAPC +CPT IDI FI IS N G+AK IF
Sbjct: 21 NFSDL-HPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIF 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE 124
N LG C VCPT +LC C AEE P+ IG LQ++AT+
Sbjct: 80 DQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATD 123
>gi|383787883|ref|YP_005472451.1| putative sulfide dehydrogenase subunit SudA [Caldisericum exile
AZM16c01]
gi|381363519|dbj|BAL80348.1| putative sulfide dehydrogenase subunit SudA [Caldisericum exile
AZM16c01]
Length = 420
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L + AL EA RCL C DAPC+K+CP + + FI SI N GA + I NP C
Sbjct: 5 LDQTQALIEAERCLYCYDAPCEKACPAHVPVPEFIQSIRSGNLKGARELISLANPSIEVC 64
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFP---DT 146
G VCP C C + PI I L +F T+ ++ D ++D P
Sbjct: 65 GEVCPEEQFCQSVCTRTKIDT-PIKIRELHKFVTD--------NVKLKDLELDLPPLNGR 115
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
K+A+IG GPA L+CA L R G + I+EK
Sbjct: 116 KVAIIGGGPAGLACARELRRFGVKSV-IFEKK 146
>gi|363898478|ref|ZP_09325001.1| glutamate synthase [Oribacterium sp. ACB1]
gi|395208013|ref|ZP_10397350.1| glutamate synthase (NADPH), homotetrameric [Oribacterium sp. ACB8]
gi|361960945|gb|EHL14175.1| glutamate synthase [Oribacterium sp. ACB1]
gi|394706221|gb|EJF13740.1| glutamate synthase (NADPH), homotetrameric [Oribacterium sp. ACB8]
Length = 462
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E+ A++EA RCL C + C CP I I FI + N+ AA+ I + L CG
Sbjct: 30 TEKEAMEEAVRCLNCRNPKCVVGCPVSIQINEFIHEVKEGNFEKAAEIIARSSALPAVCG 89
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD-TKIA 149
VCP C G C + + P+ IG L++F + ++ G AK P+ K+A
Sbjct: 90 RVCPQETQCEGVC-IRGIKGEPVAIGKLERFVADWAREHGFQA-----AKAGEPNGKKVA 143
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+CA L+++GY D+TI+E
Sbjct: 144 VIGAGPAGLTCAGDLAKLGY-DVTIFE 169
>gi|416934821|ref|ZP_11933865.1| dihydropyrimidine dehydrogenase subunit A, partial [Burkholderia
sp. TJI49]
gi|325525300|gb|EGD03151.1| dihydropyrimidine dehydrogenase subunit A [Burkholderia sp. TJI49]
Length = 398
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 48 APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYA 107
APC +CPTQIDI FI I + N GAA I S NPLG C VCPT LC G C
Sbjct: 1 APCVHACPTQIDIPGFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILCEGACVRNH 60
Query: 108 AEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDTKIALIGCGPASLSCATFLSR 166
+ P+ IG LQ+ AT+ G + R PD +A++G GPA L+CA L+
Sbjct: 61 QDAQPVAIGALQRHATDWAMATGAVRFQRAPDTG-----RHVAVVGAGPAGLACAHRLAL 115
Query: 167 MGYDDITIYE 176
G+ +T+++
Sbjct: 116 AGH-RVTVFD 124
>gi|78187547|ref|YP_375590.1| oxidoreductase [Chlorobium luteolum DSM 273]
gi|78167449|gb|ABB24547.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Chlorobium
luteolum DSM 273]
Length = 483
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 11/145 (7%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A +EA RC++C D C + CP I I FI ++ ++ GAA+ + DN L CG VCP
Sbjct: 43 AQQEALRCIQCKDPVCIQGCPVNIKIDEFIQLVADGDFLGAARKVKEDNVLPAVCGRVCP 102
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRPPDAKVDFPDTKIALI 151
D C C + + P+ IG L++F + ++ G + I+ P K K+A+I
Sbjct: 103 QEDQCEKAC-VIGKKHAPVAIGNLERFVADWEREHGEPDLPAIKAPTGK------KVAVI 155
Query: 152 GCGPASLSCATFLSRMGYDDITIYE 176
G GPA LSCA L R G+ + ++E
Sbjct: 156 GSGPAGLSCANDLIRQGH-RVVVFE 179
>gi|389580123|ref|ZP_10170150.1| NADPH-dependent glutamate synthase, homotetrameric [Desulfobacter
postgatei 2ac9]
gi|389401758|gb|EIM63980.1| NADPH-dependent glutamate synthase, homotetrameric [Desulfobacter
postgatei 2ac9]
Length = 467
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E A+ EA RCL+C C CP + I +FI I+ ++ AA+ ++ N L C
Sbjct: 32 LTEEMAITEAKRCLQCKKPACMDGCPVSVSIPAFIKCIAEGDFSAAARKLWERNALPAVC 91
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP + C G C L +E P+ IG L++FA + ++ G +I P AK K+A
Sbjct: 92 GRVCPQEEQCEGKC-LLGKKEKPVAIGYLERFAADWERNHGTGEI-PAVAKKT--GKKVA 147
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GP+ L+ A L G+ D+TI+E
Sbjct: 148 VIGSGPSGLTVAGDLLAKGH-DVTIFE 173
>gi|187779674|ref|ZP_02996147.1| hypothetical protein CLOSPO_03270 [Clostridium sporogenes ATCC
15579]
gi|187773299|gb|EDU37101.1| glutamate synthase (NADPH), homotetrameric [Clostridium sporogenes
ATCC 15579]
Length = 460
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEA RCL C C CP I I FI + ++ + AAK I + L CG
Sbjct: 29 NEEEAVKEAGRCLNCKKPMCVTKCPVSIGIPEFIQHVKNQEFEEAAKTIAKYSTLPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + + D+K + KIA+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSQREDSK----NKKIAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|387817920|ref|YP_005678265.1| glutamate synthase [NADPH] large chain [Clostridium botulinum
H04402 065]
gi|322805962|emb|CBZ03527.1| glutamate synthase [NADPH] large chain [Clostridium botulinum
H04402 065]
Length = 460
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 29 NEEEAVKEASRCLNCKKPMCVTKCPVSIGIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + + K + K+A+
Sbjct: 89 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREENK----NKKVAV 143
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 144 IGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|424827634|ref|ZP_18252409.1| putative oxidoreductase, partial [Clostridium sporogenes PA 3679]
gi|365979971|gb|EHN16015.1| putative oxidoreductase, partial [Clostridium sporogenes PA 3679]
Length = 457
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C C CP I I FI + +K + AAK I + L CG
Sbjct: 27 NEEEAVKEASRCLNCKKPMCVTKCPVSIVIPEFIQHVKNKEFEEAAKTIAKYSALPAVCG 86
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C G C L E P+ IG L++F + ++ + + K + K+A+
Sbjct: 87 RVCPQESQCEGKCVLGIKGE-PVAIGKLERFVADWSREHNVDLSEREEGK----NKKVAV 141
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IG GPA L+CA L++ GY D+TI+E
Sbjct: 142 IGSGPAGLTCAGDLAKKGY-DVTIFE 166
>gi|225388069|ref|ZP_03757793.1| hypothetical protein CLOSTASPAR_01803 [Clostridium asparagiforme
DSM 15981]
gi|225045870|gb|EEG56116.1| hypothetical protein CLOSTASPAR_01803 [Clostridium asparagiforme
DSM 15981]
Length = 461
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A EA+RC+ C +A C K CP IDI FI + + AA I + L CG VCP
Sbjct: 33 AQAEAARCINCKNAQCIKGCPVAIDIPKFIHEVKEGQFAEAAATIAKSSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + PI+IG L++F + ++ G +P K+A+IG G
Sbjct: 93 QESQCEGKC-IRGIKGEPISIGKLERFVADWSRENGFVPAKPEKTN----GKKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY ++TI+E
Sbjct: 148 PAGLTCAGDLAKMGY-EVTIFE 168
>gi|392394430|ref|YP_006431032.1| NADPH-dependent glutamate synthase [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525508|gb|AFM01239.1| NADPH-dependent glutamate synthase, homotetrameric
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 463
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ SE A++EA RCL+C + C + CP I I FI I+ +++ GAA I
Sbjct: 20 HNFNEVALGYASET-AIEEAQRCLQCKNPKCVQGCPVNISIPEFIQKITEEDFEGAAAII 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
+ L CG VCP C C L E + IG L++F E+ K I ++ PP
Sbjct: 79 KQSSSLPAVCGRVCPQESQCEAKCILGIKGES-VAIGRLERFVADYEISKGCKIPEVAPP 137
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+CA L++ G+ +TI+E
Sbjct: 138 SGK------KVAIIGAGPAGLACAGDLAKAGH-KVTIFE 169
>gi|429209754|ref|ZP_19200981.1| Pyridine nucleotide-disulfide oxidoreductase [Rhodobacter sp. AKP1]
gi|428187297|gb|EKX55882.1| Pyridine nucleotide-disulfide oxidoreductase [Rhodobacter sp. AKP1]
Length = 445
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D++ L A A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 22 RNFSDVE-PPLDGHEAKVAADRCYFCHDAPCVTACPTAIDIPLFIRQIATGTPEAAARTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F+ N LG C VCPT LC C AE P+ I LQ+ AT+ + P
Sbjct: 81 FNQNILGGMCARVCPTEQLCEEVCVRETAEGKPVEIARLQRHATDTLMARNVH----PFE 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++A++G GPA LS A L+ +G+ ++TI++
Sbjct: 137 RAEPTGKRVAVVGAGPAGLSAAHRLAMLGH-EVTIFD 172
>gi|169335117|ref|ZP_02862310.1| hypothetical protein ANASTE_01524 [Anaerofustis stercorihominis DSM
17244]
gi|169257855|gb|EDS71821.1| glutamate synthase (NADPH), homotetrameric [Anaerofustis
stercorihominis DSM 17244]
Length = 465
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + +E A+ EA RCLKC PC CP + I FI I+ + A + I
Sbjct: 22 NFEEVANG-YTEEMAINEAMRCLKCRKKPCMSGCPVMVKIPDFIAKIAEGEFEEAYQIIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV----FKDMGISQIRP 136
N L CG VCP C G C ++A + P+ IG L++FA + FKD ++ P
Sbjct: 81 ETNSLPAICGRVCPQETQCEGKC-VHAKKGEPVAIGRLERFAADWHAANFKD---EKVEP 136
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
V K+A++G GPA L+CA L GY D+T+YE
Sbjct: 137 ----VKGNGHKVAVVGAGPAGLACAGDLINKGY-DVTVYE 171
>gi|89895107|ref|YP_518594.1| hypothetical protein DSY2361 [Desulfitobacterium hafniense Y51]
gi|89334555|dbj|BAE84150.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 471
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ SE A++EA RCL+C C + CP I I FI I+ +++ GAA I
Sbjct: 28 HNFNEVALGYASET-AIEEAQRCLQCKKPKCVEGCPVNISIPEFIQKITEEDFEGAAAVI 86
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
+ L CG VCP C C L E + IG L++F E+ K I ++ PP
Sbjct: 87 KQSSSLPAVCGRVCPQESQCEAKCILGIKGES-VAIGRLERFVADYEISKGCKIPEVAPP 145
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+CA L++ G+ +TI+E
Sbjct: 146 SGK------KVAIIGAGPAGLACAGDLAKAGH-KVTIFE 177
>gi|77463757|ref|YP_353261.1| oxidoreductase [Rhodobacter sphaeroides 2.4.1]
gi|77388175|gb|ABA79360.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Rhodobacter sphaeroides 2.4.1]
Length = 445
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D++ L A A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 22 RNFSDVE-PPLDGHEAKVAADRCYFCHDAPCVTACPTAIDIPLFIRQIATGTPEAAARTI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F+ N LG C VCPT LC C AE P+ I LQ+ AT+ + P
Sbjct: 81 FNQNILGGMCARVCPTEQLCEEVCVRETAEGKPVEIARLQRHATDTLMARNVH----PFE 136
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++A++G GPA LS A L+ +G+ ++TI++
Sbjct: 137 RAEPTGKRVAVVGAGPAGLSAAHRLAMLGH-EVTIFD 172
>gi|408421133|ref|YP_006762547.1| glutamate synthase small subunit GltD [Desulfobacula toluolica
Tol2]
gi|405108346|emb|CCK81843.1| GltD: glutamate synthase, small chain [Desulfobacula toluolica
Tol2]
Length = 470
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ L+ A+ EASRCL+C + C + CP + I FI I+ N+ GAAK ++
Sbjct: 27 NFEEVP-LGLTPEMAMAEASRCLQCKNPACVEGCPVSVQIPEFIQLIAENNFSGAAKKLW 85
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+N L CG VCP + C G C + + P+ IG L++FA + + G P
Sbjct: 86 ENNALPAVCGRVCPQEEQCEGRC-ILGKKGSPVAIGYLERFAADHERKNGTGA---PPVV 141
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GP+ L+ A L G+ D+TI+E
Sbjct: 142 AQKTGKKVAVIGSGPSGLTVAGDLLTKGH-DVTIFE 176
>gi|213023247|ref|ZP_03337694.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 131
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIG 152
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKT---RGKVAIIG 131
>gi|219669520|ref|YP_002459955.1| glutamate synthase (NADPH), homotetrameric [Desulfitobacterium
hafniense DCB-2]
gi|423073534|ref|ZP_17062273.1| glutamate synthase [Desulfitobacterium hafniense DP7]
gi|219539780|gb|ACL21519.1| glutamate synthase (NADPH), homotetrameric [Desulfitobacterium
hafniense DCB-2]
gi|361855612|gb|EHL07575.1| glutamate synthase [Desulfitobacterium hafniense DP7]
Length = 463
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ SE A++EA RCL+C C + CP I I FI I+ +++ GAA I
Sbjct: 20 HNFNEVALGYASET-AIEEAQRCLQCKKPKCVEGCPVNISIPEFIQKITEEDFEGAAAVI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
+ L CG VCP C C L E + IG L++F E+ K I ++ PP
Sbjct: 79 KQSSSLPAVCGRVCPQESQCEAKCILGIKGES-VAIGRLERFVADYEISKGCKIPEVAPP 137
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+CA L++ G+ +TI+E
Sbjct: 138 SGK------KVAIIGAGPAGLACAGDLAKAGH-KVTIFE 169
>gi|39998148|ref|NP_954099.1| dihydropyrimidine dehydrogenase subunit A [Geobacter sulfurreducens
PCA]
gi|39985094|gb|AAR36449.1| NADH-dependent ferredoxin:NADP+ oxidoreductase, alpha subunit
[Geobacter sulfurreducens PCA]
Length = 470
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ E A++EA RC++C + C CP + I FIT+++ N AA+ +
Sbjct: 28 RNFDEVNRGLTPEE-AVREAQRCIRCTNRQCVAGCPVGVSIPEFITALADGNLREAARIL 86
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQF----ATEVFKDMGISQIR 135
DN L CG VCP C C + + P+ IG L++F AT ++G +
Sbjct: 87 TRDNALPAVCGRVCPQETQCEARC-VRGIKGEPVAIGYLERFVADWATANVAELGDEPLP 145
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
PP + ++A++GCGPA L+ A L+R G+ +TI+E
Sbjct: 146 PPTGR------RVAVVGCGPAGLTAAGELARKGH-GVTIFE 179
>gi|383788618|ref|YP_005473187.1| putative sulfide dehydrogenase subunit SudA [Caldisericum exile
AZM16c01]
gi|381364255|dbj|BAL81084.1| putative sulfide dehydrogenase subunit SudA [Caldisericum exile
AZM16c01]
Length = 466
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NNF ++ E A+ EASRCL+C PC + CP I+I +FI +I + + A I
Sbjct: 20 NNFFEVPLGYTKEE-AILEASRCLQCPTHPCIEGCPVHINIPAFIKAIKEEKFDLAIDII 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L G VCP + C C + + P+ IG L++F D+ + + R +
Sbjct: 79 HESNLLPAVTGRVCPQEEQCQAVCVMGKVGD-PVGIGRLERFVA----DLDLEKRRKGEV 133
Query: 140 KVDFPD----TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
V + K+A++G GPA LSCA LSRMGY D+TI+E
Sbjct: 134 TVPKKEKDNGIKVAIVGSGPAGLSCAADLSRMGY-DVTIFE 173
>gi|221639628|ref|YP_002525890.1| glutamate synthase subunit beta [Rhodobacter sphaeroides KD131]
gi|221160409|gb|ACM01389.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductase [Rhodobacter sphaeroides KD131]
Length = 443
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D++ L A A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 20 RNFSDVE-PPLDGHEAKVAADRCYFCHDAPCVTACPTAIDIPLFIRQIATGTPEAAARTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F+ N LG C VCPT LC C AE P+ I LQ+ AT+ + P
Sbjct: 79 FNQNILGGMCARVCPTEQLCEEVCVRETAEGKPVEIARLQRHATDTLMARNVH----PFE 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++A++G GPA LS A L+ +G+ ++TI++
Sbjct: 135 RAEPTGKRVAVVGAGPAGLSAAHRLAMLGH-EVTIFD 170
>gi|332558613|ref|ZP_08412935.1| glutamate synthase subunit beta [Rhodobacter sphaeroides WS8N]
gi|332276325|gb|EGJ21640.1| glutamate synthase subunit beta [Rhodobacter sphaeroides WS8N]
Length = 443
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D++ L A A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 20 RNFSDVE-PPLDGHEAKVAADRCYFCHDAPCVTACPTAIDIPLFIRQIATGTPEAAARTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F+ N LG C VCPT LC C AE P+ I LQ+ AT+ + P
Sbjct: 79 FNQNILGGMCARVCPTEQLCEEVCVRETAEGKPVEIARLQRHATDTLMARNVH----PFE 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++A++G GPA LS A L+ +G+ ++TI++
Sbjct: 135 RAEPTGKRVAVVGAGPAGLSAAHRLAMLGH-EVTIFD 170
>gi|420244035|ref|ZP_14747877.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase,
partial [Rhizobium sp. CF080]
gi|398056249|gb|EJL48257.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase,
partial [Rhizobium sp. CF080]
Length = 310
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 8 AGINV--FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFIT 65
AGI T+ NF D+ H L AL E+ RC C DAPC +CPT IDI FI
Sbjct: 10 AGIEAGRLTAADYEANFADL-HPRLDRHEALVESDRCYFCYDAPCMTACPTSIDIPLFIR 68
Query: 66 SISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV 125
I N G+AK IF N LG C VCPT LC C AE+ P+ IG LQ+++T++
Sbjct: 69 QIQTGNPIGSAKTIFDQNILGGMCARVCPTETLCEQACVRNTAEDKPVEIGRLQRYSTDI 128
Query: 126 FKDMG 130
+ G
Sbjct: 129 AMEQG 133
>gi|357054260|ref|ZP_09115350.1| glutamate synthase [Clostridium clostridioforme 2_1_49FAA]
gi|355384892|gb|EHG31947.1| glutamate synthase [Clostridium clostridioforme 2_1_49FAA]
Length = 462
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A +EASRC+ C +A C + CP I+I FI + + AA I + L CG VCP
Sbjct: 33 AQEEASRCINCKNAKCIQGCPVAINIPKFIAEVKEGKFEDAANTIAESSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + PI+IG L++F + ++ G +P K+A+IG G
Sbjct: 93 QESQCEGKC-IRGIKGEPISIGKLERFVADWSRENGFVPAKPEKTN----GIKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY ++TI+E
Sbjct: 148 PAGLTCAGDLAKMGY-EVTIFE 168
>gi|397781187|ref|YP_006545660.1| glutamate synthase (NADPH/NADH) small chain [Methanoculleus
bourgensis MS2]
gi|396939689|emb|CCJ36944.1| glutamate synthase (NADPH/NADH) small chain [Methanoculleus
bourgensis MS2]
Length = 447
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V +F ++ T LS A+ EA RCL+C C K CP IDI +FI ++ ++ GAA+
Sbjct: 10 VRDFKEVD-TGLSADEAIAEAERCLQCKKPLCVKGCPVCIDIPAFIREVAEGDFPGAART 68
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG--ISQIRP 136
+ N L CG VCP C G C L +E PI IG L++F + + G + +
Sbjct: 69 LKEQNMLPAICGRVCPQETQCEGACVL-GIKETPIRIGALERFVADWERQNGAELPKTAR 127
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P K ++A++G GPA L+ A L+R G+ +TI+E
Sbjct: 128 PTGK------RVAVVGSGPAGLTAAAELARAGH-AVTIFE 160
>gi|160938149|ref|ZP_02085505.1| hypothetical protein CLOBOL_03043 [Clostridium bolteae ATCC
BAA-613]
gi|158438953|gb|EDP16709.1| hypothetical protein CLOBOL_03043 [Clostridium bolteae ATCC
BAA-613]
Length = 462
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A +EASRC+ C +A C + CP I+I FI + + AA I + L CG VCP
Sbjct: 33 AQEEASRCINCKNAKCIQGCPVAINIPKFIAEVKEGKFEDAANTIAESSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + PI+IG L++F + ++ G +P K+A+IG G
Sbjct: 93 QESQCEGKC-IRGIKGEPISIGKLERFVADWSRENGFVPAKPEKTN----GIKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY ++TI+E
Sbjct: 148 PAGLTCAGDLAKMGY-EVTIFE 168
>gi|300813549|ref|ZP_07093880.1| glutamate synthase (NADPH), homotetrameric [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300512297|gb|EFK39466.1| glutamate synthase (NADPH), homotetrameric [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 773
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ + + A+ EASRCL C C K CP IDI FI I++ N+ +AK +
Sbjct: 327 NFDEV-CLGYTPQEAVVEASRCLNCKVPGCVKGCPVSIDIPGFIKEIANANFEQSAKVLS 385
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
L CG VCP C GC L A + ++IG L++FA + ++ + +
Sbjct: 386 MYTALPAVCGRVCPQESQCEKGCVL-AKKGDAVSIGKLERFAADYARENNVKL----NQS 440
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ D K+A+IG GPA L+CA L++MGY +TI+E
Sbjct: 441 LKKLDKKVAIIGAGPAGLTCAGELAKMGY-QVTIFE 475
>gi|126462587|ref|YP_001043701.1| glutamate synthase subunit beta [Rhodobacter sphaeroides ATCC
17029]
gi|126104251|gb|ABN76929.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodobacter sphaeroides ATCC 17029]
Length = 443
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF D++ L A A RC C DAPC +CPT IDI FI I+ AA+ I
Sbjct: 20 RNFSDVE-PPLDGHEAKVAADRCYFCHDAPCVTACPTAIDIPLFIRQIATGTPEAAARTI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
F+ N LG C VCPT LC C AE P+ I LQ+ AT+ + P
Sbjct: 79 FNQNILGGMCARVCPTEQLCEEVCVRETAEGKPVEIARLQRHATDTLMARNVH----PFE 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++A++G GPA LS A L+ +G+ ++TI++
Sbjct: 135 RAEPTGKRVAVVGAGPAGLSAAHRLAMLGH-EVTIFD 170
>gi|225026024|ref|ZP_03715216.1| hypothetical protein EUBHAL_00263 [Eubacterium hallii DSM 3353]
gi|224956674|gb|EEG37883.1| glutamate synthase (NADPH), homotetrameric [Eubacterium hallii DSM
3353]
Length = 465
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A++EA+RCL C + PC CP + I FI ++ ++ A + I
Sbjct: 24 NFEEVALGYTAEM-AMEEAARCLNCKNKPCVSGCPVNVPIPGFIEKVAEGDFEAAYEIIT 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S+N L CG VCP + C G C + + P+ IG +++F D + P A
Sbjct: 83 SENALPAICGRVCPQENQCEGKC-VRGIKGQPVGIGRMERFVA----DYHMEHAEPVKAD 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A++G GP+ ++CA L + GY D+T++E
Sbjct: 138 IKKNGKKVAVVGSGPSGITCAGELIKKGY-DVTVFE 172
>gi|13471619|ref|NP_103185.1| oxidoreductase [Mesorhizobium loti MAFF303099]
gi|14022361|dbj|BAB48971.1| glutamate synthase beta subunit [Mesorhizobium loti MAFF303099]
Length = 451
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 1 MPEQSSLAGI--NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQI 58
MPE GI + +NF D+ H L L E+ RC C DAPC +CPT I
Sbjct: 1 MPEGQFKEGIVGGRLAAEQYADNFSDL-HPPLDHHEGLVESDRCYFCYDAPCMNACPTSI 59
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
DI FI IS N G+AK IF N LG C VCPT LC C AE P+ IG L
Sbjct: 60 DIPLFIRQISTGNPIGSAKTIFDQNILGGMCARVCPTETLCEEVCVREVAEGKPVQIGRL 119
Query: 119 QQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
Q++AT D+ +++ + + + +A++G GPA L+ A L+R G+ D+TI E
Sbjct: 120 QRYAT----DVAMAENKQFYPRAEPTGKTVAVVGAGPAGLAAAHRLARHGH-DVTILE 172
>gi|14521152|ref|NP_126627.1| oxidoreductase [Pyrococcus abyssi GE5]
gi|5458370|emb|CAB49858.1| gltB-1 glutamate synthase small chain [Pyrococcus abyssi GE5]
gi|380741721|tpe|CCE70355.1| TPA: putative oxidoreductase [Pyrococcus abyssi GE5]
Length = 474
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISH------KNYYGAAKAIFSDNPLG 86
AL+EA RCL+C APC K CP IDI FI ++ K A K I+ N L
Sbjct: 35 ALREAERCLQCPKEYAPCIKGCPVNIDIPGFIRALRENRDDPDKAVREALKIIWDSNSLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS------QIRPPDAK 140
G VCP D C G C + + P+NIG L++F + + GI QIR
Sbjct: 95 AITGRVCPQEDQCEGVCVVGKVGD-PVNIGKLERFVADYARQHGIEDELLEEQIR----G 149
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A+IG GPA L+CA L++MGY ++TI+E
Sbjct: 150 IKRNGKRVAVIGAGPAGLTCAAELAKMGY-EVTIFE 184
>gi|313894244|ref|ZP_07827809.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
sp. oral taxon 158 str. F0412]
gi|313441068|gb|EFR59495.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
sp. oral taxon 158 str. F0412]
Length = 450
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C CQ CP + +I FI +I+H N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPRPLCQMGCPIENEIPRFIQAIAHGNFGLANDILAERTNLPSICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ +A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIQQNLGNVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY ++T++E
Sbjct: 135 PAGLSVAGDMAKLGY-NVTVFE 155
>gi|355681573|ref|ZP_09062065.1| glutamate synthase, homotetrameric [Clostridium citroniae
WAL-17108]
gi|354811597|gb|EHE96228.1| glutamate synthase, homotetrameric [Clostridium citroniae
WAL-17108]
Length = 462
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A +EA RC+ C +A C + CP I+I FI+ + + AA I + L CG VCP
Sbjct: 33 AQEEAQRCINCKNAKCIQGCPVAINIPKFISEVKEGKFEDAANTIAESSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + PI+IG L++F + K+ G +P K+A+IG G
Sbjct: 93 QESQCEGKC-IRGIKGEPISIGKLERFVADWSKEHGFVPAKPDKTN----GMKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY ++TI+E
Sbjct: 148 PAGLTCAGDLAKMGY-EVTIFE 168
>gi|403387395|ref|ZP_10929452.1| oxidoreductase [Clostridium sp. JC122]
Length = 463
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEASRCL C + PC CP IDI SFI ++ KN+ AAK + L CG
Sbjct: 31 NEEEAVKEASRCLNCKNKPCVSKCPVSIDIPSFIHEVAEKNFEEAAKILNRYTALPAVCG 90
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPDAKVDFPDTKI 148
VCP C C L E + IG L++F + + D+ +S+ + ++K K+
Sbjct: 91 RVCPQELQCESKCVLGIKGEA-VAIGKLERFVADWSREHDVDLSETKAKNSK------KV 143
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GPA ++ A +++ GY D+T++E
Sbjct: 144 AVIGSGPAGITAAGEMAKAGY-DVTVFE 170
>gi|336414870|ref|ZP_08595213.1| hypothetical protein HMPREF1017_02321 [Bacteroides ovatus
3_8_47FAA]
gi|423295030|ref|ZP_17273157.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus
CL03T12C18]
gi|335941731|gb|EGN03582.1| hypothetical protein HMPREF1017_02321 [Bacteroides ovatus
3_8_47FAA]
gi|392674053|gb|EIY67503.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus
CL03T12C18]
Length = 766
Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERSEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|325294883|ref|YP_004281397.1| glutamate synthase (NADPH), homotetrameric [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065331|gb|ADY73338.1| glutamate synthase (NADPH), homotetrameric [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 466
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+N+F ++K + + A++EA RCL+C APC K+CP + I FI I + AA+
Sbjct: 22 INDFKEVK-LGYTPQLAMEEAKRCLQCPTAPCVKACPVNVPIPQFIKLIEEGKFVEAARK 80
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I +N + CG VCP C G C + + P+ IG L+ FA + +G ++ +
Sbjct: 81 IKEENIMPSVCGRVCPQEIQCEGACVVGKVGD-PVAIGALEAFAGDYEASVGYEKVEVKE 139
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA++G GPA ++CA L + G+ ++TI+E
Sbjct: 140 KT----GKKIAIVGSGPAGIACAADLLKWGH-EVTIFE 172
>gi|295093875|emb|CBK82966.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Coprococcus sp.
ART55/1]
Length = 466
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + +E A+ EASRC+ C +APC CP I+I FI + N+ A K I
Sbjct: 24 NFEEVCYG-YNEEEAMAEASRCIGCKNAPCMNGCPVSINIPGFIAQVKEGNFAEAFKIIS 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C C + + I+IG L++F + ++ G I+P AK
Sbjct: 83 ESSALPAVCGRVCPQETQCEQKC-IRGIKGEAISIGKLERFVADWARENG---IKPEPAK 138
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GP+ ++ A L++MGY D+TI+E
Sbjct: 139 -EMNGHKVAVIGSGPSGVTAAGDLAKMGY-DVTIFE 172
>gi|14521926|ref|NP_127403.1| oxidoreductase [Pyrococcus abyssi GE5]
gi|5459146|emb|CAB50632.1| gltB-2 glutamate synthase small chain [Pyrococcus abyssi GE5]
gi|380742566|tpe|CCE71200.1| TPA: putative oxidoreductase [Pyrococcus abyssi GE5]
Length = 475
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 30/189 (15%)
Query: 2 PEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQID 59
PE+S + + F +L ++ AL+EA RCL+C APC K CP ID
Sbjct: 12 PERSPVERVRDFNEVNLGYTWEL----------ALREAERCLQCPKEYAPCIKGCPVNID 61
Query: 60 IKSFITSIS------HKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPI 113
I FI ++ K A K I++ N L G VCP D C G C + + PI
Sbjct: 62 IPGFIRALRENRDNPRKAVREALKVIWACNSLPAITGRVCPQEDQCEGVCVVGKVGD-PI 120
Query: 114 NIGGLQQFATEVFKDMGI------SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRM 167
NIG L++F + ++ GI +IR + ++A+IG GPA L+CA L++M
Sbjct: 121 NIGKLERFVADYAREHGIDDELLMEEIR----GIKRNGKRVAVIGAGPAGLTCAAELAKM 176
Query: 168 GYDDITIYE 176
GY ++TI+E
Sbjct: 177 GY-EVTIFE 184
>gi|333993040|ref|YP_004525653.1| glutamate synthase (NADPH), homotetrameric [Treponema
azotonutricium ZAS-9]
gi|333737124|gb|AEF83073.1| glutamate synthase (NADPH), homotetrameric [Treponema
azotonutricium ZAS-9]
Length = 500
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
E A+ EA RCL C +APC K CP Q+ I FI I ++ AAK I N L CG
Sbjct: 65 GEHQAMLEAFRCLGCGNAPCIKGCPVQVPIPRFIAEIQKGDFGAAAKVIKETNLLPAVCG 124
Query: 91 MVCPTSDLCMGGCNL---YAAEEGPINIGGLQQFATEVFKDMG---ISQIRPPDAKVDFP 144
VCP C C L + E ++IG L++F ++ ++ G I I+P K
Sbjct: 125 RVCPQEKQCQEQCTLGKSLKSVEKAVSIGRLERFVADLEREQGTAEIPAIKPKSGK---- 180
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ A+IG GPA L+ A L+R G+ ++TI+E
Sbjct: 181 --RAAVIGSGPAGLTTAADLAREGH-EVTIFE 209
>gi|374627816|ref|ZP_09700217.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
8_2_54BFAA]
gi|373912867|gb|EHQ44711.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
8_2_54BFAA]
Length = 462
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C PC++ CP + I FI ++ N A K I
Sbjct: 22 NFEEVALGYTKEM-AMEEATRCLNCKHQPCKQGCPVGVPIPEFIQEVAAGNMEEAYKIIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S+N L CG VCP + C G C + + + IG L++F D ++ + P+
Sbjct: 81 SENALPAICGRVCPQENQCEGKC-VRGIKGEAVGIGRLERFVA----DYHMANGKAPELD 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA ++CA L++ GY ++T++E
Sbjct: 136 IKSNGIKVAIIGSGPAGITCAGELAKKGY-EVTVFE 170
>gi|163814255|ref|ZP_02205644.1| hypothetical protein COPEUT_00406 [Coprococcus eutactus ATCC 27759]
gi|158449890|gb|EDP26885.1| glutamate synthase (NADPH), homotetrameric [Coprococcus eutactus
ATCC 27759]
Length = 466
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + +E A+ EASRC+ C +APC CP I+I FI + N+ A K I
Sbjct: 24 NFEEVCYG-YNEEEAMAEASRCIGCKNAPCMNGCPVSINIPGFIAQVKEGNFAEAFKIIS 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C C + + I+IG L++F + ++ G I+P AK
Sbjct: 83 ESSALPAVCGRVCPQETQCEQKC-IRGIKGEAISIGKLERFVADWARENG---IKPEPAK 138
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GP+ ++ A L++MGY D+TI+E
Sbjct: 139 -EMNGHKVAVIGSGPSGVTAAGDLAKMGY-DVTIFE 172
>gi|331002338|ref|ZP_08325856.1| glutamate synthase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330410154|gb|EGG89588.1| glutamate synthase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 465
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A+ EA RC C +A C K CP I+I +FI I N GA+ I
Sbjct: 22 NFEEVCLGYTKEE-AMAEAVRCFNCKNAKCIKGCPVSINIPAFIQEILKDNIEGASDVIA 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + ++IG L+++ + + MGI P A
Sbjct: 81 QSSSLPAVCGRVCPQETQCEGVC-IRGNRGEAVSIGKLERYVADTARKMGIK----PKAN 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A+IG GPA LSCA L+++GY ++TI+E
Sbjct: 136 PNKNGKRVAVIGSGPAGLSCAGDLAKLGY-EVTIFE 170
>gi|237733309|ref|ZP_04563790.1| glutamate synthase [Mollicutes bacterium D7]
gi|229383690|gb|EEO33781.1| glutamate synthase [Coprobacillus sp. D7]
Length = 269
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C PC++ CP + I FI ++ N A K I
Sbjct: 22 NFEEVALGYTKEM-AMEEATRCLNCKHQPCKQGCPVGVPIPEFIQEVAAGNMEEAYKIIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S+N L CG VCP + C G C + + + IG L++F D ++ + P+
Sbjct: 81 SENALPAICGRVCPQENQCEGKC-VRGIKGEAVGIGRLERFVA----DYHMANGKAPELD 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA ++CA L++ GY ++T++E
Sbjct: 136 IKSNGIKVAIIGSGPAGITCAGELAKKGY-EVTVFE 170
>gi|27768991|gb|AAH42543.1| Dpyd protein, partial [Mus musculus]
Length = 879
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 110 EGPINIGGLQQFATEVFKDMGISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFL 164
EGPINIGGLQQFATEVFK M I QIR PP+ + KIAL G GPAS+SCA+FL
Sbjct: 1 EGPINIGGLQQFATEVFKAMNIPQIRNPSLPPPEHMPEAYSAKIALFGAGPASISCASFL 60
Query: 165 SRMGYDDITIYEKNTY 180
+R+GY +ITI+EK Y
Sbjct: 61 ARLGYSNITIFEKQEY 76
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W C ++ + +F
Sbjct: 435 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYW-----CHSVTELKADF 486
>gi|167755994|ref|ZP_02428121.1| hypothetical protein CLORAM_01514 [Clostridium ramosum DSM 1402]
gi|365832746|ref|ZP_09374273.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
3_3_56FAA]
gi|167703986|gb|EDS18565.1| glutamate synthase (NADPH), homotetrameric [Clostridium ramosum DSM
1402]
gi|365259876|gb|EHM89851.1| glutamate synthase (NADPH), homotetrameric [Coprobacillus sp.
3_3_56FAA]
Length = 462
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RCL C PC++ CP + I FI ++ N A K I
Sbjct: 22 NFEEVALGYTKEM-AMEEATRCLNCKHQPCKQGCPVGVPIPEFIQEVAAGNMEEAYKIIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S+N L CG VCP + C G C + + + IG L++F D ++ + P+
Sbjct: 81 SENALPAICGRVCPQENQCEGKC-VRGIKGEAVGIGRLERFVA----DYHMANGKAPELD 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA ++CA L++ GY ++T++E
Sbjct: 136 IKSNGIKVAIIGSGPAGITCAGELAKKGY-EVTVFE 170
>gi|440781408|ref|ZP_20959750.1| oxidoreductase [Clostridium pasteurianum DSM 525]
gi|440221013|gb|ELP60219.1| oxidoreductase [Clostridium pasteurianum DSM 525]
Length = 460
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ +E A+KEA+RCL+C + C CP I FI I K++ AA
Sbjct: 18 IKNFNEV-CLGYTEEDAIKEANRCLQCKNPRCVGKCPVNNKIPQFIKCIREKDFKKAASI 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I + L CG VCP C GGC L E PI+IG L++F + ++ I +
Sbjct: 77 IAETSSLPAVCGRVCPQELQCEGGCVLGIKGE-PISIGNLERFVADWSRENNIQL----N 131
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA ++CA L+++GY ++TI+E
Sbjct: 132 EKAQSNGKKVAVIGSGPAGIACAGDLAKLGY-EVTIFE 168
>gi|255693385|ref|ZP_05417060.1| glutamate synthase, small subunit [Bacteroides finegoldii DSM
17565]
gi|260620862|gb|EEX43733.1| glutamate synthase (NADPH), homotetrameric [Bacteroides finegoldii
DSM 17565]
Length = 766
Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCTEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIANKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKFGY-DVTVFE 472
>gi|419760069|ref|ZP_14286354.1| glutamate synthase (NADPH), homotetrameric [Thermosipho africanus
H17ap60334]
gi|407515108|gb|EKF49894.1| glutamate synthase (NADPH), homotetrameric [Thermosipho africanus
H17ap60334]
Length = 457
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA RC++C + C + CP IDI FI I+ K++ G+ K + N L CG VCP
Sbjct: 33 AIEEAKRCIQCPNPTCVQGCPVGIDIPGFIKKIAEKDFEGSYKVLKKYNSLPAICGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C L ++ PI+IG L++F + + I + P+ ++ + KIA+IG G
Sbjct: 93 QEIQCEGNCVLNKVDQ-PISIGALERFIADWAINNNIEEDILPEKRI---NKKIAIIGAG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+ A+ LS+ G+ + +YE
Sbjct: 149 PAGLTTASELSKAGF-SVDMYE 169
>gi|78043225|ref|YP_360810.1| oxidoreductase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995340|gb|ABB14239.1| glutamate synthase (NADPH), homotetrameric [Carboxydothermus
hydrogenoformans Z-2901]
Length = 464
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ S A+KEA RCL C C++ CP ++DI FI I + A I
Sbjct: 22 KNFDEV-ALGYSLELAMKEAERCLDCKKPACKQGCPVEVDIPDFIRFIKAGDIDSAINKI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
N L CG VCP C G C L E P+ IG L++FA E+ K + PP
Sbjct: 81 KEKNALPAICGRVCPQESQCEGQCVLGKKGE-PVAIGRLERFAADYELAKGTQNVTVAPP 139
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+CA L+++G+ +TI+E
Sbjct: 140 TGK------KVAVIGSGPAGLTCAADLAKLGH-KVTIFE 171
>gi|373469396|ref|ZP_09560586.1| glutamate synthase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371764498|gb|EHO52900.1| glutamate synthase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 463
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ S+ A++EA+RC C +A C + CP I+I FI I + GA+ I
Sbjct: 21 KNFDEV-CLGYSKEEAMEEAARCFNCKNAKCIQGCPVSINIPGFIQEILKDDIEGASDVI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP C G C + ++IG L+++ + + MGI P A
Sbjct: 80 AQSSSLPAVCGRVCPQETQCEGVC-IRGNRGEAVSIGKLERYVADTARKMGIK----PKA 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A+IG GPA LSCA L+++GY ++TI+E
Sbjct: 135 NPNKNGKRVAVIGSGPAGLSCAGDLAKLGY-EVTIFE 170
>gi|397167365|ref|ZP_10490807.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Enterobacter radicincitans DSM 16656]
gi|396090723|gb|EJI88291.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Enterobacter radicincitans DSM 16656]
Length = 463
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LS A+ EA RC C DAPC ++CP +ID+ SFI I+ N GAA+ I N LG TC
Sbjct: 30 LSSTQAVLEAERCYYCFDAPCTRACPAEIDVPSFIQRIAQSNDRGAAEVILRANILGGTC 89
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
VCPT LC C A + P++I LQ++AT+ F + +P + ++A
Sbjct: 90 SRVCPTETLCEQACVRNAQDGRPLDIARLQRYATDRFF---AAPGKPLFTRAASSGKRVA 146
Query: 150 LIGCGPASLS 159
++G GPA L+
Sbjct: 147 IVGAGPAGLT 156
>gi|383114511|ref|ZP_09935273.1| glutamate synthase (NADPH), homotetrameric [Bacteroides sp. D2]
gi|313693783|gb|EFS30618.1| glutamate synthase (NADPH), homotetrameric [Bacteroides sp. D2]
Length = 766
Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|160887094|ref|ZP_02068097.1| hypothetical protein BACOVA_05110 [Bacteroides ovatus ATCC 8483]
gi|423288807|ref|ZP_17267658.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus
CL02T12C04]
gi|156107505|gb|EDO09250.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus ATCC
8483]
gi|392670005|gb|EIY63491.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus
CL02T12C04]
Length = 766
Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|262408596|ref|ZP_06085142.1| NADPH-dependent glutamate synthase small subunit [Bacteroides sp.
2_1_22]
gi|294647520|ref|ZP_06725100.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus SD
CC 2a]
gi|294808138|ref|ZP_06766906.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
xylanisolvens SD CC 1b]
gi|345511347|ref|ZP_08790891.1| NADPH-dependent glutamate synthase small subunit [Bacteroides sp.
D1]
gi|229444296|gb|EEO50087.1| NADPH-dependent glutamate synthase small subunit [Bacteroides sp.
D1]
gi|262353461|gb|EEZ02555.1| NADPH-dependent glutamate synthase small subunit [Bacteroides sp.
2_1_22]
gi|292637132|gb|EFF55570.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus SD
CC 2a]
gi|294444645|gb|EFG13344.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
xylanisolvens SD CC 1b]
Length = 766
Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|237721365|ref|ZP_04551846.1| NADPH-dependent glutamate synthase subunit small [Bacteroides sp.
2_2_4]
gi|293369931|ref|ZP_06616502.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus SD
CMC 3f]
gi|229449161|gb|EEO54952.1| NADPH-dependent glutamate synthase subunit small [Bacteroides sp.
2_2_4]
gi|292634977|gb|EFF53498.1| glutamate synthase (NADPH), homotetrameric [Bacteroides ovatus SD
CMC 3f]
Length = 766
Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|283795584|ref|ZP_06344737.1| glutamate synthase [Clostridium sp. M62/1]
gi|291077254|gb|EFE14618.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. M62/1]
gi|295091253|emb|CBK77360.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Clostridium cf.
saccharolyticum K10]
Length = 468
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA RCL C +A C K CP IDI +F+ + N AA+ I + L CG VCP
Sbjct: 37 AMAEAVRCLNCKNAQCVKGCPVSIDIPAFVQEVKAGNIEKAAEIIAKSSALPAVCGRVCP 96
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F + ++ G P A ++A+IG G
Sbjct: 97 QESQCEGKC-IRGIKGEPVSIGKLERFVADWAREHGFV----PKAPETKNGKRVAVIGSG 151
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY ++ I+E
Sbjct: 152 PAGLTCAGDLAKMGY-EVKIFE 172
>gi|307354229|ref|YP_003895280.1| glutamate synthase [Methanoplanus petrolearius DSM 11571]
gi|307157462|gb|ADN36842.1| glutamate synthase (NADPH), homotetrameric [Methanoplanus
petrolearius DSM 11571]
Length = 448
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ +F+++ H S++ A+ E+ RC+ C C K CP IDI FI++IS +++ AA
Sbjct: 10 IKDFNEVDHG-FSKQDAILESLRCMDCVRPQCIKGCPVNIDIPGFISAISKEDFRKAAVI 68
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
+ +DN L CG VCP + C G C L + P+ IG L++F + ++ G+ QI P+
Sbjct: 69 LKTDNMLPAICGRVCPQENQCEGVCVL-GNKGKPVKIGALERFVADWERENGV-QI--PE 124
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + ++A++G GPA ++ A L++ G+ +TI+E
Sbjct: 125 VK-EKTGKRVAIVGSGPAGITAAAELAKEGH-SVTIFE 160
>gi|265755601|ref|ZP_06090222.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263234207|gb|EEZ19800.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 765
Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LSE A+ EA RCL C + C CP I+I FI +I + AAK + + L C
Sbjct: 332 LSEEQAVTEAKRCLDCPNPTCMNGCPVGINIPRFIKNIERGEFLEAAKTLKETSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C A + IG L++FA + ++ G QI P+ + + K+A
Sbjct: 392 GRVCPQEKQCESQCTHLKAGHEAVAIGYLERFAADYERENG--QISVPEV-AEKNNIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 449 VIGSGPAGLSFAGDMAKQGY-DVTVFE 474
>gi|282883235|ref|ZP_06291834.1| glutamate synthase, small subunit [Peptoniphilus lacrimalis 315-B]
gi|281297047|gb|EFA89544.1| glutamate synthase, small subunit [Peptoniphilus lacrimalis 315-B]
Length = 768
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ + + A+ EASRCL C C K CP IDI FI I++ N+ +AK +
Sbjct: 327 NFDEV-CLGYTPQEAVVEASRCLNCKVPGCVKGCPVSIDIPGFIKEIANANFEQSAKVLS 385
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
L CG VCP C GC L + ++IG L++FA + ++ + +
Sbjct: 386 MYTALPAVCGRVCPQESQCEKGCVLVKKGDA-VSIGKLERFAADYARENNVKL----NQS 440
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ D K+A+IG GPA L+CA L++MGY +TI+E
Sbjct: 441 LKKLDKKVAIIGAGPAGLTCAGELAKMGY-QVTIFE 475
>gi|402833531|ref|ZP_10882144.1| glutamate synthase (NADPH), homotetrameric [Selenomonas sp. CM52]
gi|402280024|gb|EJU28794.1| glutamate synthase (NADPH), homotetrameric [Selenomonas sp. CM52]
Length = 468
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + F +L +D E A+ EA RCL C C+K CP + I
Sbjct: 10 MPEQDPKVRAHNFEEVAL--GYD--------EETAIAEAERCLNCKVPQCRKGCPVSVRI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI I ++ A I DN L CG VCP + C C L E P+ IG L++
Sbjct: 60 PEFIQKIKAHDFAAAIDIIKGDNALPAVCGRVCPQENQCEKLCILGKRGE-PVGIGRLER 118
Query: 121 FATEVFKDMGISQIRPPDAKVDF-PDT-KIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA + ++ +++P V+F PD K+A+IG GPA LSCA L++ GY +TI+E
Sbjct: 119 FAAD-WQLAQEEEVKP----VEFAPDAQKVAIIGAGPAGLSCAGDLAKKGY-RVTIFE 170
>gi|404405709|ref|ZP_10997293.1| NADPH-dependent glutamate synthase [Alistipes sp. JC136]
Length = 461
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E AL EASRCL+C + C +CP I I FI ++ AA I
Sbjct: 21 NFEEVCYGYNPEEAAL-EASRCLRCKNPRCVGACPVGIRIPDFIAAVHEGRLQEAADIIS 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
D+ L CG VCP C G C L E P+ +G L++F + + G + ++P +
Sbjct: 80 EDSSLPSICGRVCPQESQCEGACILGIKGE-PVAVGKLERFVGDWKLEHG-APVQPAAVR 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA+ L+RMGY D+ I+E
Sbjct: 138 ---SGRKVAVIGSGPAGLACASDLARMGY-DVKIFE 169
>gi|299148592|ref|ZP_07041654.1| glutamate synthase, small subunit [Bacteroides sp. 3_1_23]
gi|298513353|gb|EFI37240.1| glutamate synthase, small subunit [Bacteroides sp. 3_1_23]
Length = 766
Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERENG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|255659221|ref|ZP_05404630.1| glutamate synthase, homotetrameric [Mitsuokella multacida DSM
20544]
gi|260848673|gb|EEX68680.1| glutamate synthase, homotetrameric [Mitsuokella multacida DSM
20544]
Length = 467
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ E A+ EA RCL C C+K CP IDI +FI I +++ GA I
Sbjct: 20 HNFEEVA-LGYDEDTAVAEAERCLHCKVPQCRKGCPVSIDIPTFIGKIKERDFDGAIATI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
N L CG VCP + C C L E + IG L++F E+ D +++P
Sbjct: 79 KESNALPAICGRVCPQENQCEKHCILTKRGES-VAIGRLERFVADRELASD---KEVKPV 134
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ D K+A+IG GP+ LSCA L++ GY D+TI+E
Sbjct: 135 ERAADA--QKVAVIGAGPSGLSCAGDLAKKGY-DVTIFE 170
>gi|255280956|ref|ZP_05345511.1| glutamate synthase, homotetrameric [Bryantella formatexigens DSM
14469]
gi|255268404|gb|EET61609.1| glutamate synthase (NADPH), homotetrameric [Marvinbryantia
formatexigens DSM 14469]
Length = 462
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E A++EA+RC+ C +A C CP I+I FI + N+ A + I
Sbjct: 21 NFDEVCLGYNKEE-AMEEAARCINCKNAKCVTGCPVNINIPGFIHEVKEGNFEEAYRIIS 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C + + I+IG L++F + ++ GI P A
Sbjct: 80 ESSALPAICGRVCPQESQCEGKC-IRGIKGEAISIGKLERFVADWARENGIK----PTAP 134
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GP+ L+CA L+++GY D+TI+E
Sbjct: 135 AEKNGKKVAVIGSGPSGLTCAGDLAKLGY-DVTIFE 169
>gi|337284316|ref|YP_004623790.1| putative oxidoreductase [Pyrococcus yayanosii CH1]
gi|334900250|gb|AEH24518.1| putative oxidoreductase [Pyrococcus yayanosii CH1]
Length = 472
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 28/188 (14%)
Query: 2 PEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQID 59
PE+S + F +L F+ ALKEA RCL+C APC K CP QID
Sbjct: 12 PERSVEERVRDFNEVNLGYTFEL----------ALKEAERCLQCPKEYAPCIKGCPVQID 61
Query: 60 IKSFITS--ISHKNYYGAAKA----IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPI 113
I FI + ++ +N A K I ++N L G VCP + C G C + + PI
Sbjct: 62 IPGFIRALRVNKENPRKAVKEALGIIRANNALPAITGRVCPQEEQCEGVCVVGKVGD-PI 120
Query: 114 NIGGLQQFATEVFKDMGIS-----QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMG 168
NIG L++F + ++ GI ++ P + K+A++G GPA L+CA L++MG
Sbjct: 121 NIGKLERFVADYAREHGIEDELLMEVVP---NIRGNGKKVAVVGAGPAGLTCAAELAKMG 177
Query: 169 YDDITIYE 176
Y ++TI+E
Sbjct: 178 Y-EVTIFE 184
>gi|291541729|emb|CBL14839.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Ruminococcus
bromii L2-63]
Length = 464
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ T +E A++EA RCL C PC CP I I FI ++ N+ GA I
Sbjct: 22 NFLEVA-TGYTEEVAIEEAQRCLNCKHRPCVNGCPVHIAIPDFIKEVAQGNFAGAYDVIS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C C + + P+ IG L++F D +Q D K
Sbjct: 81 QSSSLPAVCGRVCPQESQCESKC-VRGIKTEPVGIGRLERFVA----DWHNAQT---DVK 132
Query: 141 VDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYE 176
V+ P++ K+A++G GPA L+CA L++ GY D+T++E
Sbjct: 133 VNKPESNGHKVAIVGSGPAGLTCAGDLAKKGY-DVTVFE 170
>gi|260887788|ref|ZP_05899051.1| glutamate synthase, homotetrameric [Selenomonas sputigena ATCC
35185]
gi|330838685|ref|YP_004413265.1| glutamate synthase (NADPH), homotetrameric [Selenomonas sputigena
ATCC 35185]
gi|260862464|gb|EEX76964.1| glutamate synthase, homotetrameric [Selenomonas sputigena ATCC
35185]
gi|329746449|gb|AEB99805.1| glutamate synthase (NADPH), homotetrameric [Selenomonas sputigena
ATCC 35185]
Length = 468
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + F +L +D E A+ EA RCL C C+K CP + I
Sbjct: 10 MPEQDPKVRAHNFEEVAL--GYD--------EETAIAEAERCLNCKVPQCRKGCPVSVRI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI I ++ A I DN L CG VCP + C C L E P+ IG L++
Sbjct: 60 PEFIQKIKAHDFAAAIDIIKGDNALPAVCGRVCPQENQCEKLCILGKRGE-PVGIGRLER 118
Query: 121 FATEVFKDMGISQIRPPDAKVDF-PDT-KIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA + ++ +++P V+F PD K+A+IG GPA LSCA L++ GY +TI+E
Sbjct: 119 FAAD-WQLAQEEEVKP----VEFAPDAQKVAIIGAGPAGLSCAGDLAKKGY-RVTIFE 170
>gi|21673308|ref|NP_661373.1| oxidoreductase [Chlorobium tepidum TLS]
gi|21646399|gb|AAM71715.1| glutamate synthase, small subunit [Chlorobium tepidum TLS]
Length = 472
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF ++ + L+ A +EA RC++C D C CP I I FI I+ ++ GA +
Sbjct: 17 VGNFKEV-NLGLTPEQAQQEALRCIQCKDPVCIAGCPVNIKIDQFIKLIAEGDFMGAVRK 75
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS---QIR 135
I DN L CG VCP D C C + E P+ IG L++F + + G +I
Sbjct: 76 IKEDNVLPSICGRVCPQEDQCEKVCVIGKKHE-PVAIGNLERFVGDYERTSGQKIDPKIA 134
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
PP K K+A++G GPA LSCA L++ G+ + ++E
Sbjct: 135 PPTGK------KVAVVGSGPAGLSCANDLAQYGH-KVVVFE 168
>gi|154502746|ref|ZP_02039806.1| hypothetical protein RUMGNA_00560 [Ruminococcus gnavus ATCC 29149]
gi|153796629|gb|EDN79049.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus gnavus
ATCC 29149]
Length = 464
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA+RCL C +A C + CP I+I +F+ + N A K I + L CG VCP
Sbjct: 34 AMEEATRCLNCKNAKCIEGCPVSINIPAFVQEVKEGNIEEAYKIIGQSSALPAICGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F D + P+ + K+A+IG G
Sbjct: 94 QESQCEGKC-IRGIKGDPVSIGKLERFVA----DYALEHDIKPEGAKEQNGHKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L++MGY D+T++E
Sbjct: 149 PSGLTCAGDLAKMGY-DVTVFE 169
>gi|336431119|ref|ZP_08610973.1| glutamate synthase [Lachnospiraceae bacterium 2_1_58FAA]
gi|336020041|gb|EGN49758.1| glutamate synthase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 464
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA+RCL C +A C + CP I+I +F+ + N A K I + L CG VCP
Sbjct: 34 AMEEATRCLNCKNAKCIEGCPVSINIPAFVQEVKEGNIEEAYKIIGQSSALPAICGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F D + P+ + K+A+IG G
Sbjct: 94 QESQCEGKC-IRGIKGDPVSIGKLERFVA----DYALEHDIKPEGAKEQNGHKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L++MGY D+T++E
Sbjct: 149 PSGLTCAGDLAKMGY-DVTVFE 169
>gi|332158104|ref|YP_004423383.1| putative oxidoreductase [Pyrococcus sp. NA2]
gi|331033567|gb|AEC51379.1| putative oxidoreductase [Pyrococcus sp. NA2]
Length = 476
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSIS------HKNYYGAAKAIFSDNPLG 86
ALKEA RCL+C APC K CP IDI FI + K A + I++ N L
Sbjct: 35 ALKEAERCLQCPKEYAPCIKGCPVNIDIPGFIAKLREYKDNPRKAVTEALRIIWACNSLP 94
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFP 144
G VCP + C G C + + PINIG L++F + ++ GI +R +
Sbjct: 95 AITGRVCPQEEQCEGVCVVGKVGD-PINIGKLERFVADYAREHGIEDELLREEIKGIKKN 153
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A++G GPA L+CA L++MGY ++TI+E
Sbjct: 154 GKRVAVVGAGPAGLTCAAELAKMGY-EVTIFE 184
>gi|303229813|ref|ZP_07316593.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
atypica ACS-134-V-Col7a]
gi|429760653|ref|ZP_19293119.1| putative glutamate synthase [Veillonella atypica KON]
gi|302515573|gb|EFL57535.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
atypica ACS-134-V-Col7a]
gi|429176911|gb|EKY18261.1| putative glutamate synthase [Veillonella atypica KON]
Length = 452
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+ N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIARGNFGLANDILAERTNLPAICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + G+ +P K D K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAADFESINGLR--KPKKIKQDL--GKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY D+T++E
Sbjct: 135 PAGLSVAGDVAKLGY-DVTVFE 155
>gi|256005385|ref|ZP_05430349.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum DSM 2360]
gi|385779188|ref|YP_005688353.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum DSM 1313]
gi|419723542|ref|ZP_14250661.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum AD2]
gi|419725312|ref|ZP_14252362.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum YS]
gi|255990611|gb|EEU00729.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum DSM 2360]
gi|316940868|gb|ADU74902.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum DSM 1313]
gi|380771330|gb|EIC05200.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum YS]
gi|380780472|gb|EIC10151.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum AD2]
Length = 464
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ I F +L +E+ A++EA RCL C PC CP + I
Sbjct: 11 MPEQDPNVRIKNFLEVAL----------GYTEQMAMEEAQRCLNCKHKPCVSGCPVNVKI 60
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
F+ I+ + A I N L CG VCP + C C + + P+ IG L++
Sbjct: 61 PEFVQLIAQGKFEKAYNKIRETNNLPAICGRVCPQENQCEKFC-VRGIKGEPVAIGRLER 119
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA + G + P+ ++A+IG GPASL+CA+ L+++GY ++TI+E
Sbjct: 120 FAADWHMKNGTTSYEKPEKN----GKRVAVIGSGPASLTCASDLAKLGY-EVTIFE 170
>gi|435853797|ref|YP_007315116.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
gi|433670208|gb|AGB41023.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
Length = 461
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 18/176 (10%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + + F+ +L +D E A+KEA RCL+C++ C+ CP ++DI
Sbjct: 10 MPEQDPVERTDNFSEVAL--GYD--------EETAIKEAERCLQCSNPKCKTGCPVEVDI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI ++ + AAK + N L CG VCP + C C + E P+ IG L++
Sbjct: 60 PEFIELVAEGKFEKAAKKVKEKNNLPAICGRVCPQEEQCEAECIVGIKNE-PVGIGRLER 118
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + +D +++P V K+A++G GPA L+ L++MGY +TI+E
Sbjct: 119 FVADYIRDS--EKVKP----VKQDKGKVAVVGAGPAGLTAGADLAKMGY-QVTIFE 167
>gi|315607954|ref|ZP_07882947.1| glutamate synthase [Prevotella buccae ATCC 33574]
gi|315250423|gb|EFU30419.1| glutamate synthase [Prevotella buccae ATCC 33574]
Length = 463
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 25 IKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNP 84
+ H S R A++EA RCL C C+K CP DI+ FI +S N A I +
Sbjct: 12 VVHEEFSTREAIEEAKRCLHCKVPSCEKGCPIGNDIRDFIHELSKGNMGDAMAIINEKSN 71
Query: 85 LGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFP 144
L CG VCP C G C L A + PI IG ++QF + M +++ + P
Sbjct: 72 LPAICGRVCPHEKQCQGHCVL-ARKGNPIQIGKIEQFIADFDTSMNLTREKLPQKD---- 126
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+ A L+R G+ +TI+E
Sbjct: 127 RGKVAVIGSGPAGLTVAGDLARQGF-SVTIFE 157
>gi|421074058|ref|ZP_15535100.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
JBW45]
gi|392527855|gb|EIW50939.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
JBW45]
Length = 468
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ F SL +E A EA+RCL+C APC+K CP Q+DI
Sbjct: 10 MPEQEPKVRAKNFAEVSL----------GYTEELAKAEAARCLQCKAAPCRKGCPVQVDI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI + N A I N L CG VCP + C C L E + IG L++
Sbjct: 60 PAFIKEVKEGNMDVAIAKIKEVNSLPAVCGRVCPQEEQCEKYCVLAKRGEA-VGIGRLER 118
Query: 121 FATEVFKDMGISQIRPPDAKVDF-PDT-KIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++ G S A +D+ PD K+A+IG GPA L+ A L++ GY +TI+E
Sbjct: 119 YVADTARNKGESI-----AAIDYAPDAQKVAVIGSGPAGLAVAGDLAKKGY-KVTIFE 170
>gi|294792535|ref|ZP_06757682.1| glutamate synthase (NADPH), homotetrameric [Veillonella sp. 6_1_27]
gi|294456434|gb|EFG24797.1| glutamate synthase (NADPH), homotetrameric [Veillonella sp. 6_1_27]
Length = 450
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+ N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIARGNFGEANDILAERTNLPAICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY ++T++E
Sbjct: 135 PAGLSVAGDVAKLGY-EVTVFE 155
>gi|168205498|ref|ZP_02631503.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
E str. JGS1987]
gi|170663059|gb|EDT15742.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
E str. JGS1987]
Length = 468
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + C + CP ++I SFI+ I ++ + + +
Sbjct: 22 NFKEV-SLGYKEEEAIEEANRCLGCKNPKCVEGCPVSVNIPSFISFIKKGDFSASFEELS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C G C L E P+ IG L++F + ++ +S ++ D
Sbjct: 81 KYNALPAVCGRVCPQESQCEGKCVLGIKGE-PLAIGQLERFIADFARNNKLSSLKKSDET 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+++GY +TI+E
Sbjct: 140 LE----KVAVIGSGPAGLTCAGELAKLGY-RVTIFE 170
>gi|182418717|ref|ZP_02949990.1| glutamate synthase , homotetrameric [Clostridium butyricum 5521]
gi|237669744|ref|ZP_04529721.1| glutamate synthase (NADPH), homotetrameric [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182377411|gb|EDT74967.1| glutamate synthase , homotetrameric [Clostridium butyricum 5521]
gi|237654818|gb|EEP52381.1| glutamate synthase (NADPH), homotetrameric [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 461
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEA+RCL C + C + CP ++I FI ++ AAK I + L CG
Sbjct: 32 TEEQAIKEANRCLGCKNPKCVEGCPVSVNIPGFIAKAKEGDFEAAAKEIAKYSALPAVCG 91
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPDAKVDFPDTKI 148
VCP C G C L E + IG L++F + + ++ +S++ P+ K ++
Sbjct: 92 RVCPQESQCEGKCVLGIKGEA-VAIGKLEKFTADWSRKNNIDLSEVEAPNGK------RV 144
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 145 AVIGSGPAGLTCAGDLAKKGY-DVTIFE 171
>gi|255525515|ref|ZP_05392451.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
gi|255510783|gb|EET87087.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
Length = 460
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EASRCL+C C CP I+I +FI+ + +N+ AAK I + L CG VCP
Sbjct: 33 AVLEASRCLECKKPMCVSKCPVSINIPAFISKVKEENFEEAAKIIAESSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD--MGISQIRPPDAKVDFPDTKIALIG 152
C G C L E I+IG L++F + ++ + +S + + K K+A+IG
Sbjct: 93 QESQCEGKCILGIKGEA-ISIGKLERFVADWSRENNIDLSDKKTSNGK------KVAIIG 145
Query: 153 CGPASLSCATFLSRMGYDDITIYE 176
GPA L+CA L+++GY D+TI+E
Sbjct: 146 SGPAGLTCAGDLAKLGY-DVTIFE 168
>gi|14591620|ref|NP_143702.1| oxidoreductase [Pyrococcus horikoshii OT3]
gi|3258312|dbj|BAA30995.1| 476aa long hypothetical glutamate synthase small chain [Pyrococcus
horikoshii OT3]
Length = 476
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQIDIKSFITSIS------HK 70
+ +FD++ E ALKEA RCL+C APC K CP I+I FI ++ K
Sbjct: 20 IKDFDEVNLGYTWEL-ALKEAERCLQCPVEYAPCIKGCPVNINIPGFIKALRENKDNPRK 78
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
A + I++ N L G VCP D C G C + + P+NIG L++F + + G
Sbjct: 79 AVKEALRVIWACNSLPAITGRVCPQEDQCEGACVVGKVGD-PVNIGKLERFVADYARQHG 137
Query: 131 ISQ--IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
I + + K+A+IG GPA L+CA L++MGY D+TIYE
Sbjct: 138 IDDELLMEEIKNIKKNGKKVAVIGAGPAGLTCAAELAKMGY-DVTIYE 184
>gi|380694063|ref|ZP_09858922.1| putative bifunctional 2-polyprenylphenol hydroxylase/glutamate
synthase subunit beta [Bacteroides faecis MAJ27]
Length = 763
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C +E P+ IG L++FA + ++ G QI P + K+A
Sbjct: 390 GRVCPQEKQCESKCIHLKMKEKPVAIGYLERFAADFERESG--QISVP-VIAEKNGIKVA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+ ++E
Sbjct: 447 VIGSGPAGLSFAGDMAKYGY-DVKVFE 472
>gi|363890182|ref|ZP_09317524.1| glutamate synthase, homotetrameric [Eubacteriaceae bacterium CM5]
gi|402837812|ref|ZP_10886327.1| glutamate synthase (NADPH), homotetrameric [Eubacteriaceae
bacterium OBRC8]
gi|361965910|gb|EHL18869.1| glutamate synthase, homotetrameric [Eubacteriaceae bacterium CM5]
gi|402274243|gb|EJU23427.1| glutamate synthase (NADPH), homotetrameric [Eubacteriaceae
bacterium OBRC8]
Length = 469
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 21 NFDDIKHT-TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ + L E A++EA RCL C +A C K+CP I+I +FI I K+ GA K I
Sbjct: 24 NFDEVCYGYNLDE--AVEEAKRCLNCKNARCIKTCPVGINIPAFIQKILAKDIEGAGKII 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP C C + E P++IG L++F + G++ A
Sbjct: 82 AESSSLPAVCGRVCPQESQCEMTCIMGIKNE-PVSIGKLERFVADTNMKNGVTFGEKEPA 140
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+ A L++ GY D+TI+E
Sbjct: 141 K----NIKVAVIGSGPAGLTAAGDLAKKGY-DVTIFE 172
>gi|363893035|ref|ZP_09320176.1| glutamate synthase (NADPH), homotetrameric [Eubacteriaceae
bacterium CM2]
gi|361961838|gb|EHL15009.1| glutamate synthase (NADPH), homotetrameric [Eubacteriaceae
bacterium CM2]
Length = 469
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 21 NFDDIKHT-TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ + L E A++EA RCL C +A C K+CP I+I +FI I K+ GA K I
Sbjct: 24 NFDEVCYGYNLDE--AVEEAKRCLNCKNARCIKTCPVGINIPAFIQKILAKDIEGAGKII 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP C C + E P++IG L++F + G++ A
Sbjct: 82 AESSSLPAVCGRVCPQESQCEMTCIMGIKNE-PVSIGKLERFVADTNMKNGVTFGEKEPA 140
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+ A L++ GY D+TI+E
Sbjct: 141 K----NIKVAVIGSGPAGLTAAGDLAKKGY-DVTIFE 172
>gi|125972893|ref|YP_001036803.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Clostridium
thermocellum ATCC 27405]
gi|281417093|ref|ZP_06248113.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum JW20]
gi|125713118|gb|ABN51610.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum ATCC 27405]
gi|281408495|gb|EFB38753.1| glutamate synthase (NADPH), homotetrameric [Clostridium
thermocellum JW20]
Length = 464
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ I F +L +E+ A++EA RCL C PC CP + I
Sbjct: 11 MPEQDPNVRIKNFLEVAL----------GYTEQMAMEEAQRCLNCKHKPCVSGCPVNVKI 60
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
F+ I+ + A I N L CG VCP + C C + + P+ IG L++
Sbjct: 61 PEFVQLIAQGKFEEAYNKIRETNNLPAICGRVCPQENQCEKFC-VRGIKGEPVAIGRLER 119
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA + G + P+ ++A+IG GPASL+CA+ L+++GY ++TI+E
Sbjct: 120 FAADWHMKNGTTSYEKPEKN----GKRVAVIGSGPASLTCASDLAKLGY-EVTIFE 170
>gi|406884201|gb|EKD31653.1| hypothetical protein ACD_77C00281G0002 [uncultured bacterium]
Length = 462
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + +E A+ EASRCL C + C SCP I I FI I N+ A+ I
Sbjct: 21 NFEEVSYG-YNEAEAILEASRCLSCKNPLCVPSCPVSIQIPQFIREIELGNFKEASAIIA 79
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
D+ L CG VCP C G C L E + IG L++F + ++ + IR D K
Sbjct: 80 KDSSLPSVCGRVCPQESQCEGTCILGIKGES-VAIGKLERFVGDWSRE---NNIRFTD-K 134
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A++G GPA L+CAT L+R+GY ++TI+E
Sbjct: 135 APANGKKVAIVGSGPAGLACATDLARLGY-NVTIFE 169
>gi|297618229|ref|YP_003703388.1| glutamate synthase (NADPH), homotetrameric [Syntrophothermus
lipocalidus DSM 12680]
gi|297146066|gb|ADI02823.1| glutamate synthase (NADPH), homotetrameric [Syntrophothermus
lipocalidus DSM 12680]
Length = 467
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ E A+ EA RC++C ++PC + CP +I+I +FI I+ +++ GA I
Sbjct: 25 HNFNEVA-LGYDEDTAVAEAQRCIQCKNSPCMEGCPVEINIPAFIKKITERDFAGAISII 83
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR--PP 137
N L CG VCP + C C + E P+ IG L++F + G ++ P
Sbjct: 84 KEKNNLPAICGRVCPQENQCEKKCTVGKKHE-PVAIGRLERFVADWEMAHGSRSVKKAKP 142
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K K+A++G GP+ L+ A L+ MGY +T++E
Sbjct: 143 NGK------KVAIVGSGPSGLTAAADLALMGY-KVTVFE 174
>gi|223476926|ref|YP_002581312.1| glutamate synthase (NADPH), homotetrameric [Thermococcus sp. AM4]
gi|214032152|gb|EEB72983.1| glutamate synthase (NADPH), homotetrameric [Thermococcus sp. AM4]
Length = 471
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
A+KEA RCL+C + APC K CP I+I +FI I + GA + I++DN L G V
Sbjct: 35 AVKEAERCLQCPENYAPCIKGCPVHINIPAFIAKIKEGDIKGALRIIWNDNTLPAITGRV 94
Query: 93 CPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGI--SQIRPPDAKVDFPDTKIAL 150
CP D C G C + + ++IG L++F + + GI + + K K+A+
Sbjct: 95 CPQEDQCEGACVVGKVGDA-VDIGKLERFVADYARKHGIEEELLCEFEEKCTGELGKVAV 153
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
+G GPA L+ A L++MGY +TI+E
Sbjct: 154 VGAGPAGLTAAGELAKMGY-KVTIFE 178
>gi|363894299|ref|ZP_09321387.1| glutamate synthase, homotetrameric [Eubacteriaceae bacterium
ACC19a]
gi|361962630|gb|EHL15742.1| glutamate synthase, homotetrameric [Eubacteriaceae bacterium
ACC19a]
Length = 469
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 21 NFDDIKHT-TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ + L E A++EA RCL C +A C K+CP I+I +FI I K+ GA K I
Sbjct: 24 NFDEVCYGYNLDE--AVEEAKRCLNCKNARCIKTCPVGINIPAFIQKILAKDIEGAGKII 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP C C + E P++IG L++F + G++ A
Sbjct: 82 AESSSLPAVCGRVCPQESQCEMTCIMGIKNE-PVSIGKLERFVADTNMKNGVTFGEKEPA 140
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+ A L++ GY D+TI+E
Sbjct: 141 K----NIKVAVIGSGPAGLTAAGDLAKKGY-DVTIFE 172
>gi|288924924|ref|ZP_06418860.1| glutamate synthase (NADPH), homotetrameric [Prevotella buccae D17]
gi|402308202|ref|ZP_10827211.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. MSX73]
gi|288338114|gb|EFC76464.1| glutamate synthase (NADPH), homotetrameric [Prevotella buccae D17]
gi|400375646|gb|EJP28541.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. MSX73]
Length = 463
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 25 IKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNP 84
+ H S R A++EA RCL C C+K CP DI+ FI +S N A I +
Sbjct: 12 VVHEGFSTREAIEEAKRCLHCKVPSCEKGCPIGNDIRDFIHELSKGNMGDAMAIINEKSN 71
Query: 85 LGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFP 144
L CG VCP C G C L A + PI IG ++QF + M +++ + P
Sbjct: 72 LPAICGRVCPHEKQCQGHCVL-ARKGNPIQIGKIEQFIADFDTSMNLTREKLPQKD---- 126
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+ A L+R G+ +TI+E
Sbjct: 127 RGKVAVIGSGPAGLTVAGDLARQGF-SVTIFE 157
>gi|210622751|ref|ZP_03293343.1| hypothetical protein CLOHIR_01291 [Clostridium hiranonis DSM 13275]
gi|210154083|gb|EEA85089.1| hypothetical protein CLOHIR_01291 [Clostridium hiranonis DSM 13275]
Length = 760
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA RCL C + C K CP +I+I +FI+ + + GAAK I + L CG VCP
Sbjct: 329 AMREAERCLNCKNPRCVKGCPVKINIPAFISKVKDGDIEGAAKVISISSSLPSVCGRVCP 388
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P+ IG L++F + ++ G+S + + K+A++G G
Sbjct: 389 QESQCEGQC-VVGIKNDPLAIGKLERFVGDWSRENGVSF----GVEEESNGIKVAVVGSG 443
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L++ GY D+TI+E
Sbjct: 444 PSGLACAGDLAKKGY-DVTIFE 464
>gi|170760954|ref|YP_001788138.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium botulinum
A3 str. Loch Maree]
gi|169407943|gb|ACA56354.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Clostridium botulinum A3 str. Loch Maree]
Length = 438
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP + FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTNPGKFIRSLRFRNFNGAVATIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ T+ + GI + A + K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGRLQRYLTDYEQSTGIKILEAVQATKE----KVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY +T++E
Sbjct: 135 PSGLAAAAQLALEGY-KVTVFE 155
>gi|193212137|ref|YP_001998090.1| oxidoreductase [Chlorobaculum parvum NCIB 8327]
gi|193085614|gb|ACF10890.1| glutamate synthase (NADPH), homotetrameric [Chlorobaculum parvum
NCIB 8327]
Length = 482
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NF ++ + L+ A +EA RC++C D C CP I I FI I+ ++ GA +
Sbjct: 28 VGNFKEV-NLGLTPEQAQQEALRCIQCKDPVCIAGCPVNIKIDQFIKLIAEGDFMGAVRK 86
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I DN L CG VCP D C C + E P+ IG L++F + + G +I P
Sbjct: 87 IKEDNVLPSICGRVCPQEDQCEKVCVIGKKHE-PVAIGNLERFVGDYERTSG-QKIDPKI 144
Query: 139 AKVDFPDT--KIALIGCGPASLSCATFLSRMGYDDITIYE 176
A P T K+A++G GPASLSCA L++ G+ + I+E
Sbjct: 145 A----PSTGKKVAVVGSGPASLSCANDLAQYGH-KVVIFE 179
>gi|387819568|ref|YP_005679915.1| glutamate synthase [NADPH] large chain [Clostridium botulinum
H04402 065]
gi|322807612|emb|CBZ05187.1| glutamate synthase [NADPH] large chain [Clostridium botulinum
H04402 065]
Length = 461
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NFD++ +E A++EA RCL C C CP ++I FI I + AAKA
Sbjct: 18 ITNFDEV-CLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKKGEFEKAAKA 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I D+ L CG VCP C C L E P+ IG L++F + + + +
Sbjct: 77 IAKDSALPAVCGRVCPQETQCECKCVLGIKGE-PVAIGKLERFVADWSRKNNVDLSSTEE 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K + K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 KK----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 168
>gi|341582822|ref|YP_004763314.1| putative oxidoreductase [Thermococcus sp. 4557]
gi|340810480|gb|AEK73637.1| putative oxidoreductase [Thermococcus sp. 4557]
Length = 478
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 13/152 (8%)
Query: 35 ALKEASRCLKCAD--APCQKSCPTQIDIKSFITSISH------KNYYGAAKAIFSDNPLG 86
ALKEA RC++C APC K CP I+I F+ ++ + A + I++DN L
Sbjct: 37 ALKEAERCIQCPPEYAPCIKGCPVHINIPGFLKALRENADNPDEAVKNALRVIWNDNTLP 96
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFP 144
G VCP D C C + + PINIG L++F + ++ GI Q ++ A+ D
Sbjct: 97 AVTGRVCPQEDQCEAPCVMGKVGD-PINIGKLERFVADYARERGIDQELLKEFIAETD-G 154
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A++G GPA L+CA L++MGY +TI+E
Sbjct: 155 NGRVAVVGAGPAGLTCALELAKMGY-KVTIFE 185
>gi|110802445|ref|YP_698585.1| putative oxidoreductase [Clostridium perfringens SM101]
gi|110682946|gb|ABG86316.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
SM101]
Length = 468
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + C + CP ++I SFI+ I ++ + + +
Sbjct: 22 NFKEV-SLGYKEEEAIEEANRCLGCKNPKCVEGCPVSVNIPSFISFIKKGDFSASFEELS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C G C L E P+ IG L++F + ++ +S ++ D
Sbjct: 81 KYNALPAVCGRVCPQESQCEGKCVLGIKGE-PLAIGQLERFIADFARNNKLSPLKKSDKT 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+++GY +TI+E
Sbjct: 140 LE----KVAVIGSGPAGLTCAGELAKLGY-RVTIFE 170
>gi|239625652|ref|ZP_04668683.1| NADPH-dependent glutamate synthase small chain [Clostridiales
bacterium 1_7_47_FAA]
gi|239519882|gb|EEQ59748.1| NADPH-dependent glutamate synthase small chain [Clostridiales
bacterium 1_7_47FAA]
Length = 462
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A +EA RC+ C +A C + CP I+I FI + + AA I + L CG VCP
Sbjct: 33 AQEEAQRCINCKNAKCIQGCPVSINIPKFIAEVKDGKFEDAANTIAESSALPAVCGRVCP 92
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + PI+IG L++F + ++ G +P K+A+IG G
Sbjct: 93 QESQCEGKC-IRGIKGEPISIGKLERFVADWSRENGFVPAKPEKTN----GLKVAVIGSG 147
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+CA L++MGY ++TI+E
Sbjct: 148 PAGLTCAGDLAKMGY-EVTIFE 168
>gi|282849600|ref|ZP_06258984.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
parvula ATCC 17745]
gi|282580537|gb|EFB85936.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
parvula ATCC 17745]
Length = 450
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+ N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIARGNFGEANDILAERTNLPSICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY ++T++E
Sbjct: 135 PAGLSVAGDVAKLGY-EVTVFE 155
>gi|225374749|ref|ZP_03751970.1| hypothetical protein ROSEINA2194_00369 [Roseburia inulinivorans DSM
16841]
gi|225213415|gb|EEG95769.1| hypothetical protein ROSEINA2194_00369 [Roseburia inulinivorans DSM
16841]
Length = 461
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCL C +A C K CP I+I FI + N+ A I + L CG VCP C
Sbjct: 39 RCLNCKNAQCMKGCPVSINIPGFIAEVKEGNFEAAYHVISESSALPAVCGRVCPQETQCE 98
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + + P+ IG L++F + ++ GI P K+A+IG GPA L+C
Sbjct: 99 GKC-IRGIKGEPVAIGKLERFVADWAREHGIK----PKKAEKLNGHKVAVIGSGPAGLTC 153
Query: 161 ATFLSRMGYDDITIYE 176
A L+++GY D+TI+E
Sbjct: 154 AGDLAKLGY-DVTIFE 168
>gi|210634805|ref|ZP_03298311.1| hypothetical protein COLSTE_02238 [Collinsella stercoris DSM 13279]
gi|210158609|gb|EEA89580.1| glutamate synthase (NADPH), homotetrameric [Collinsella stercoris
DSM 13279]
Length = 468
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 28 TTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGL 87
T ++ A+ EA+RCL C C + CP ++I FI+ I +++ GA + I DN L
Sbjct: 35 TGFTKEDAIAEANRCLDCKKPLCMEGCPVGVNIPGFISKIRDEDWAGALETIKGDNLLPS 94
Query: 88 TCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDT 146
CG VCP + C G C L E + IG L++ ++ +++G + + +P + K
Sbjct: 95 VCGRVCPQENQCEGKCILGRKGEA-VAIGQLERMVGDMAEEVGKAPVCKPKNGK------ 147
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEK--NTYDMVTNVSP--RIVKGTTSRHLYGP 202
K+A++G GP+ ++CA L+R G+ D+T++E ++T P R+ K R + G
Sbjct: 148 KVAIVGSGPSGIACAGELAREGF-DVTVFEAFFTGGGVLTYGIPEFRLPKSIVKREIEGL 206
Query: 203 EQ 204
EQ
Sbjct: 207 EQ 208
>gi|269798775|ref|YP_003312675.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Veillonella parvula DSM 2008]
gi|269095404|gb|ACZ25395.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Veillonella parvula DSM 2008]
Length = 450
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+ N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIARGNFGEANDILAERTNLPSICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY ++T++E
Sbjct: 135 PAGLSVAGDVAKLGY-EVTVFE 155
>gi|296133210|ref|YP_003640457.1| glutamate synthase (NADPH), homotetrameric [Thermincola potens JR]
gi|296031788|gb|ADG82556.1| glutamate synthase (NADPH), homotetrameric [Thermincola potens JR]
Length = 462
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ I F +L +D + A+ EA+RCL+C APCQK CP ++I
Sbjct: 10 MPEQDPRERIKNFKEVAL--GYD--------QETAVAEANRCLQCKGAPCQKGCPVGVEI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI I ++ A I N L CG VCP + C C L E P+ IG L++
Sbjct: 60 PAFIKLIKEGDFIAAGNKIKERNNLPAVCGRVCPQENQCEKQCVLGKKGE-PVGIGRLER 118
Query: 121 FATEVFKDMGISQIRPPDA-KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
FA D G + R K+A+IG GPA L+ A L+++GY +T++E
Sbjct: 119 FAA----DYGAAFDRTAQHLSRQVTGKKVAVIGSGPAGLTAAGDLAKLGY-RVTVFE 170
>gi|431794340|ref|YP_007221245.1| NADPH-dependent glutamate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784566|gb|AGA69849.1| NADPH-dependent glutamate synthase, homotetrameric
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 463
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ SE A++EA RCL+C + C + CP I I FI I+ ++Y AA+ I
Sbjct: 20 HNFNEVALGYASET-AIEEAQRCLQCKNPKCVQGCPVNISIPEFIQKITEEDYMAAAEII 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
+ L CG VCP C C L E P+ IG L++F E+ + + +I P
Sbjct: 79 KKSSSLPAVCGRVCPQESQCEAKCILGIKGE-PVAIGRLERFVADYEISQGCKVPEIPAP 137
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+CA L++ G+ +T++E
Sbjct: 138 TGK------KVAVIGAGPAGLACAGDLAKAGH-KVTVFE 169
>gi|294794331|ref|ZP_06759467.1| glutamate synthase (NADPH), homotetrameric [Veillonella sp. 3_1_44]
gi|294454661|gb|EFG23034.1| glutamate synthase (NADPH), homotetrameric [Veillonella sp. 3_1_44]
Length = 450
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+ N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIARGNFGEANDILAERTNLPSICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY ++T++E
Sbjct: 135 PAGLSVAGDVAKLGY-EVTVFE 155
>gi|350567031|ref|ZP_08935640.1| glutamate synthase [Peptoniphilus indolicus ATCC 29427]
gi|348659862|gb|EGY76582.1| glutamate synthase [Peptoniphilus indolicus ATCC 29427]
Length = 783
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+ EA RCL C C CP IDI FI I+++N+ +AK + L CG
Sbjct: 351 TEEEAVIEAKRCLNCKKPLCVGGCPVSIDIPGFIKEIANQNFEQSAKVLSLYTALPAVCG 410
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP C C L + + IG L++FA + ++ ++ P + K+A+
Sbjct: 411 RVCPQETQCEQRCILTNKGDA-VAIGKLERFAADYARNNNVTLSEKPRSN----GHKVAI 465
Query: 151 IGCGPASLSCATFLSRMGYDDITIYE 176
IGCGPA +SCA L++MGY D+TI+E
Sbjct: 466 IGCGPAGISCAGELAKMGY-DVTIFE 490
>gi|417000316|ref|ZP_11940532.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
parvula ACS-068-V-Sch12]
gi|333976018|gb|EGL76890.1| putative glutamate synthase (NADPH), homotetrameric [Veillonella
parvula ACS-068-V-Sch12]
Length = 450
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
AL EA RCL C C+ CP + +I FI +I+ N+ A + L CG VCP
Sbjct: 19 ALAEAKRCLNCPKPLCKMGCPIENEIPRFIQAIARGNFGEANDILAERTNLPSICGRVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
+ C G C + A++ PINIG L++FA + F+ I+++R P K+ K+A++G G
Sbjct: 79 RENQCEGNCIMNKAKKPPINIGKLERFAAD-FES--INELRKPK-KIKQDLGKVAVVGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA LS A ++++GY ++T++E
Sbjct: 135 PAGLSVAGDVAKLGY-EVTVFE 155
>gi|402313830|ref|ZP_10832740.1| glutamate synthase (NADPH), homotetrameric [Lachnospiraceae
bacterium ICM7]
gi|400365612|gb|EJP18663.1| glutamate synthase (NADPH), homotetrameric [Lachnospiraceae
bacterium ICM7]
Length = 463
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ S+ A+ EA+RC C +A C + CP I+I +FI I + GA+ I
Sbjct: 21 KNFEEV-CLGYSKEEAMAEAARCFNCKNAKCIQGCPVSINIPAFIQEILKGDIEGASDVI 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP C G C + ++IG L+++ + + MGI P A
Sbjct: 80 AQSSSLPAVCGRVCPQETQCEGVC-IRGNRGEAVSIGKLERYVADTARKMGIK----PKA 134
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ ++A+IG GPA LSCA L+++GY ++TI+E
Sbjct: 135 NPNKNGKRVAVIGSGPAGLSCAGDLAKLGY-EVTIFE 170
>gi|189459914|ref|ZP_03008699.1| hypothetical protein BACCOP_00547 [Bacteroides coprocola DSM 17136]
gi|189433379|gb|EDV02364.1| glutamate synthase (NADPH), homotetrameric [Bacteroides coprocola
DSM 17136]
Length = 764
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E AL EA RCL CA+ C++ CP I+I FI +I + AA+ + + L C
Sbjct: 332 LNEEQALTEAKRCLDCANPSCREGCPVGINIPGFIKNIERGEFLEAARVLKQTSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C + IG L++FA + ++ G QI P+ + K+A
Sbjct: 392 GRVCPQEKQCESKCIHLKMGHEAVAIGYLERFAADYERESG--QISVPEI-AEKNGIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
++G GPA LS A ++++GY D+T++E
Sbjct: 449 VVGSGPAGLSFAGDMAKLGY-DVTVFE 474
>gi|29349718|ref|NP_813221.1| bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase
subunit beta [Bacteroides thetaiotaomicron VPI-5482]
gi|383120657|ref|ZP_09941382.1| glutamate synthase (NADPH), homotetrameric [Bacteroides sp. 1_1_6]
gi|29341628|gb|AAO79415.1| NADPH-dependent glutamate synthase small chain [Bacteroides
thetaiotaomicron VPI-5482]
gi|251840298|gb|EES68380.1| glutamate synthase (NADPH), homotetrameric [Bacteroides sp. 1_1_6]
Length = 763
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + K+A
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADFERESG--QISVP-VIAEKNGIKVA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLSFAGDMAKYGY-DVTVFE 472
>gi|282601285|ref|ZP_06257970.1| glutamate synthase [Subdoligranulum variabile DSM 15176]
gi|282569536|gb|EFB75071.1| glutamate synthase (NADPH), homotetrameric [Subdoligranulum
variabile DSM 15176]
Length = 467
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF ++ +E A+ EA RCL+C + PC+ CP IDI FI ++ + A K I
Sbjct: 23 KNFKEVALGYTAEM-AVNEAQRCLQCKNHPCRSGCPVDIDIPGFIAHVAKGEFEEAYKVI 81
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP + C G C + + P+ IG L++F + +++ ++ P
Sbjct: 82 AQSSALPAVCGRVCPQENQCEGKC-VRGIKGEPVGIGRLERFVADWYRENVHTKPEKPTP 140
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GP+ L+ A L++MGY +T+YE
Sbjct: 141 N----GHKVAVIGAGPSGLTVAGDLAKMGY-QVTVYE 172
>gi|392959660|ref|ZP_10325142.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
DSM 17108]
gi|421052474|ref|ZP_15515463.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
B4]
gi|421070570|ref|ZP_15531702.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
A11]
gi|392443205|gb|EIW20756.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
B4]
gi|392448196|gb|EIW25399.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
A11]
gi|392456213|gb|EIW32967.1| glutamate synthase (NADPH), homotetrameric [Pelosinus fermentans
DSM 17108]
Length = 468
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ F+ SL +E A EA+RCL+C APC+K CP Q+DI
Sbjct: 10 MPEQEPKVRAKNFSEVSL----------GYTEELAKAEAARCLQCKTAPCRKGCPVQVDI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI + N A I N L CG VCP + C C L E + IG L++
Sbjct: 60 PAFIKEVKEGNMDVAIAKIKEVNSLPAVCGRVCPQEEQCEKYCVLAKRGEA-VGIGRLER 118
Query: 121 FATEVFKDMG--ISQIR-PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++ G I+ I PDA+ K+A+IG GPA L+ A L++ GY +TI+E
Sbjct: 119 YVADTARNKGEHITAIDYAPDAQ------KVAVIGSGPAGLAVAGDLAKKGY-KVTIFE 170
>gi|229816289|ref|ZP_04446598.1| hypothetical protein COLINT_03341 [Collinsella intestinalis DSM
13280]
gi|229808140|gb|EEP43933.1| hypothetical protein COLINT_03341 [Collinsella intestinalis DSM
13280]
Length = 468
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 28 TTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGL 87
T ++ A+ EA+RCL C C + CP ++I FI+ I +++ GA + I DN L
Sbjct: 35 TGFTKENAIAEANRCLDCKKPLCMQGCPVGVNIPGFISKIRDEDWAGALETIKGDNLLPS 94
Query: 88 TCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFPDT 146
CG VCP + C G C L E + IG L++ ++ +++G + + +P + K
Sbjct: 95 VCGRVCPQENQCEGKCILGRKGEA-VAIGQLERMVGDMAEEVGRAPVCKPKNGK------ 147
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEK--NTYDMVTNVSP--RIVKGTTSRHLYGP 202
K+A++G GP+ ++CA L+R G+ D+T++E ++T P R+ K R + G
Sbjct: 148 KVAIVGSGPSGIACAGELAREGF-DVTVFEAFFTGGGVLTYGIPEFRLPKKIVKREIDGL 206
Query: 203 EQ 204
EQ
Sbjct: 207 EQ 208
>gi|432328862|ref|YP_007247006.1| NADPH-dependent glutamate synthase, homotetrameric
[Aciduliprofundum sp. MAR08-339]
gi|432135571|gb|AGB04840.1| NADPH-dependent glutamate synthase, homotetrameric
[Aciduliprofundum sp. MAR08-339]
Length = 476
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 23/181 (12%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQI 58
+PEQ A I+ F +L F+ K +EASRCL+C APC K CP +
Sbjct: 12 VPEQDPKARIHNFNEVALGYTFELAK----------EEASRCLQCPYNFAPCIKGCPVNV 61
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
+I FI I ++ GA + I N L G VCP + C C + + INIG L
Sbjct: 62 NIPGFIKKILEEDIKGALEVIHKTNSLPGITGRVCPQEEQCEMNCVMGKLGD-KINIGKL 120
Query: 119 QQFATEVFKDMGI---SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIY 175
++F + ++ GI ++I P + K ++A++G GPA L+ A+ L +MGY D+T++
Sbjct: 121 ERFVADYAREHGIMPETEIAPKNGK------RVAIVGSGPAGLTAASDLIKMGY-DVTVF 173
Query: 176 E 176
E
Sbjct: 174 E 174
>gi|212550939|ref|YP_002309256.1| NADPH-dependent glutamate synthase small subunit [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212549177|dbj|BAG83845.1| NADPH-dependent glutamate synthase small subunit [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 494
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++N+D++ + LS AL E+ RCL C D C CP +I+I FI +I N AAK
Sbjct: 45 IHNYDEV-NIGLSLEQALLESKRCLDCLDPQCITGCPVEINIPKFIKNIERNNILEAAKV 103
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
+ + L CG VCP C C + P+ IG L++FA++ F+ S P
Sbjct: 104 LKQTSALPAVCGRVCPQEKQCESKCVYLKTKGEPVAIGYLERFASD-FERENSSLSVPEI 162
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+K + KIA++G GPA LS A ++++GY +IT++E
Sbjct: 163 SKNN--GIKIAVVGSGPAGLSFAGDMAKLGY-EITVFE 197
>gi|383319541|ref|YP_005380382.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Methanocella
conradii HZ254]
gi|379320911|gb|AFC99863.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Methanocella
conradii HZ254]
Length = 466
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAP-CQKSCPTQIDIKSFITSISHKNYYGAAK 77
V NFD++ SE A+ EA RCL C DAP C + C IDI +F+ I+ N+ A +
Sbjct: 26 VKNFDEVA-LGYSEEEAISEAKRCLHC-DAPMCIEGCSVGIDIPAFVKKIAEGNFEEAIR 83
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I N L CG VCP C C + + P+ IG L++FA + KD +RP
Sbjct: 84 IIKEKNNLPAICGRVCPQESQCEKKC-ILGMKWKPLAIGRLERFAADHEKD----GVRP- 137
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+V K+A++G GPA L+ A L+RMGY +TI+E
Sbjct: 138 --EVTPNGRKVAVVGSGPAGLTAAADLARMGY-AVTIFE 173
>gi|452994176|emb|CCQ94254.1| Glutamate synthase (NADPH), homotetrameric [Clostridium ultunense
Esp]
Length = 467
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
I+V +NFD++ +E A+ EA RCL C PC +CP I I FI I+
Sbjct: 9 ISVQDPIERASNFDEV-CLGYTEEEAMAEAKRCLNCKHHPCVGNCPVSIHIPRFIKHIAE 67
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDM 129
+ AA + L CG VCP + C C L E P++IG L++FA + ++
Sbjct: 68 GEFEEAAHVLAEQTALPAVCGRVCPQEEQCEQVCVLGIKGE-PVSIGKLERFAADWAREH 126
Query: 130 GISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
I ++ K F K+A+IG GPA ++CA L++ GY D+TI+E
Sbjct: 127 NI-ELGKTKEKNGF---KVAVIGSGPAGITCAGDLAKEGY-DVTIFE 168
>gi|260911946|ref|ZP_05918511.1| glutamate synthase [Prevotella sp. oral taxon 472 str. F0295]
gi|260633969|gb|EEX52094.1| glutamate synthase [Prevotella sp. oral taxon 472 str. F0295]
Length = 787
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ AL EA RCL CA C + CP I+I SFI +I + AAK + + L C
Sbjct: 350 LTKELALVEAKRCLDCAKPTCMEGCPVSINIPSFIKNIERGQFLAAAKVLKDTSALPAVC 409
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRPPDAKVDFPDT 146
G VCP C C E + IG L++FA + ++ G + ++ P + D
Sbjct: 410 GRVCPQEKQCESRCVHLKMNEPAVAIGYLERFAADYERESGNISVPELAPAN------DI 463
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA++G GPA LS A +++ GY D+T++E
Sbjct: 464 KIAVVGSGPAGLSFAGDMAKYGY-DVTVFE 492
>gi|187935105|ref|YP_001887399.1| oxidoreductase [Clostridium botulinum B str. Eklund 17B]
gi|187723258|gb|ACD24479.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum B
str. Eklund 17B]
Length = 463
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEA+RCL C + C + CP IDI FI ++ AAK I + L CG
Sbjct: 32 NEEEAIKEANRCLGCKNPKCVEGCPVSIDIPGFIAKAKDGDFENAAKEIAKYSALPAVCG 91
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVD-FPDTKIA 149
VCP C G C L E P+ IG L++F + + I AK + KIA
Sbjct: 92 RVCPQESQCEGKCVLGIKGE-PVAIGKLEKFTADWSRKNNIDL-----AKTEALNGKKIA 145
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+CA L++ GY D+TI+E
Sbjct: 146 VIGSGPAGLTCAGDLAKRGY-DVTIFE 171
>gi|429244892|ref|ZP_19208311.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium botulinum
CFSAN001628]
gi|428758082|gb|EKX80535.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium botulinum
CFSAN001628]
Length = 438
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP + FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTNPGKFIRSLRFRNFNGAVATIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ + + +GI + A + K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGRLQRYLADYEQSIGIKILEAVQATKE----KVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY +TI+E
Sbjct: 135 PSGLAAAAQLALEGY-KVTIFE 155
>gi|242237504|ref|YP_002985685.1| glutamate synthase subunit beta [Dickeya dadantii Ech703]
gi|242129561|gb|ACS83863.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Dickeya dadantii Ech703]
Length = 472
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RC C DAPC ++CP ID+ SFI I+ N GAA+ I N LG C
Sbjct: 35 LTAMQAVIEAERCYYCFDAPCTRACPADIDVPSFIHRIAQDNARGAAEVILQANVLGGMC 94
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVF-KDMGISQ-IRPPDAKVDFPDTK 147
VCPT LC C A + P+ IG LQ+ AT+ + + G +R PD+
Sbjct: 95 SRVCPTETLCEQACVRNAQDGNPVKIGLLQRHATDRYLANPGNPLFVRAPDS-----GKT 149
Query: 148 IALIGCGPASLSCATFLSRMGY 169
+A++G GPA L+ A L+ G+
Sbjct: 150 VAVVGAGPAGLTVAHRLAVCGH 171
>gi|420155393|ref|ZP_14662255.1| putative glutamate synthase (NADPH), homotetrameric [Clostridium
sp. MSTE9]
gi|394759171|gb|EJF41950.1| putative glutamate synthase (NADPH), homotetrameric [Clostridium
sp. MSTE9]
Length = 433
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
S ++ D K T+ E A+ EA RCL+C CQK CP DI FI +S N A
Sbjct: 2 SFLDKSVDYKSYTMRE--AIDEAKRCLRCKVPSCQKGCPISNDIPDFIYQLSKGNLGEAR 59
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ + L CG +CP C+G C L A+ PI +G L++F + +MG+ +
Sbjct: 60 EILARKTNLPAVCGRICPHEKQCVGHCVL-NAKHAPIQVGKLEEFIADFDAEMGLIK--- 115
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ V K+A+IG GPA L+ A L+R G+ ++ IYEK
Sbjct: 116 -ENLVHKTRGKVAVIGSGPAGLTVAGDLARQGF-NVVIYEKE 155
>gi|150017052|ref|YP_001309306.1| oxidoreductase [Clostridium beijerinckii NCIMB 8052]
gi|149903517|gb|ABR34350.1| glutamate synthase (NADPH), homotetrameric [Clostridium
beijerinckii NCIMB 8052]
Length = 460
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+E A+KEA+RCL C + C + CP I+I FI+ ++ AAK I + L CG
Sbjct: 30 NEDDAIKEANRCLNCKNPKCVEGCPVSINIPGFISKAKTGDFESAAKEIAKYSALPAVCG 89
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFK--DMGISQIRPPDAKVDFPDTKI 148
VCP + C G C L E + IG L+ F + + + +SQ P K K+
Sbjct: 90 RVCPQENQCEGNCVLGIKGEA-VAIGKLEMFTADWSRKNKVDLSQTEPSKGK------KV 142
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 143 AVIGSGPAGLTCAGDLAKKGY-DVTIFE 169
>gi|404366393|ref|ZP_10971776.1| glutamate synthase (NADPH), homotetrameric [Fusobacterium ulcerans
ATCC 49185]
gi|404288974|gb|EJZ44716.1| glutamate synthase (NADPH), homotetrameric [Fusobacterium ulcerans
ATCC 49185]
Length = 629
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E A EASRC+ C + C + CP IDI +FI I + GA + I
Sbjct: 189 NFEEVCYGYNMEE-AQAEASRCINCKNPLCVQGCPVSIDIPAFIKKIKEGDMAGAGRIIA 247
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS-QIRPPDA 139
+ L CG VCP C G C L E P++IG L++F + GI +I+ +
Sbjct: 248 EYSNLPAVCGRVCPQETQCEGKCILGIKGE-PVSIGKLERFVGDWVIANGIEYEIKEKNN 306
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+ A L++MGY D+TIYE
Sbjct: 307 K------KVAVIGGGPAGLTAAGDLAKMGY-DVTIYE 336
>gi|421058685|ref|ZP_15521352.1| glutamate synthase (NADPH), homotetrameric, partial [Pelosinus
fermentans B3]
gi|392460340|gb|EIW36655.1| glutamate synthase (NADPH), homotetrameric, partial [Pelosinus
fermentans B3]
Length = 372
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ F+ SL +E A EA+RCL+C APC+K CP Q+DI
Sbjct: 10 MPEQEPKVRAKNFSEVSL----------GYTEELAKAEAARCLQCKTAPCRKGCPVQVDI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI + N A I N L CG VCP + C C L E + IG L++
Sbjct: 60 PAFIKEVKEGNMDVAIAKIKEVNSLPAVCGRVCPQEEQCEKYCVLAKRGEA-VGIGRLER 118
Query: 121 FATEVFKDMG--ISQIR-PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++ G I+ I PDA+ K+A+IG GPA L+ A L++ GY +TI+E
Sbjct: 119 YVADTARNKGEHITAIDYAPDAQ------KVAVIGSGPAGLAVAGDLAKKGY-KVTIFE 170
>gi|421066202|ref|ZP_15527837.1| glutamate synthase (NADPH), homotetrameric, partial [Pelosinus
fermentans A12]
gi|392457230|gb|EIW33928.1| glutamate synthase (NADPH), homotetrameric, partial [Pelosinus
fermentans A12]
Length = 371
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ F+ SL +E A EA+RCL+C APC+K CP Q+DI
Sbjct: 10 MPEQEPKVRAKNFSEVSL----------GYTEELAKAEAARCLQCKTAPCRKGCPVQVDI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
+FI + N A I N L CG VCP + C C L E + IG L++
Sbjct: 60 PAFIKEVKEGNMDVAIAKIKEVNSLPAVCGRVCPQEEQCEKYCVLAKRGEA-VGIGRLER 118
Query: 121 FATEVFKDMG--ISQIR-PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + ++ G I+ I PDA+ K+A+IG GPA L+ A L++ GY +TI+E
Sbjct: 119 YVADTARNKGEHITAIDYAPDAQ------KVAVIGSGPAGLAVAGDLAKKGY-KVTIFE 170
>gi|291536479|emb|CBL09591.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Roseburia
intestinalis M50/1]
Length = 461
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCL C +A C K CP I+I +FI + N+ A I + L CG VCP C
Sbjct: 39 RCLNCKNAQCMKGCPVSINIPAFIAQVKEGNFEEAYHIISQSSALPAVCGRVCPQESQCE 98
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + + P+ IG L++F + ++ GI P K+A+IG GPA L+C
Sbjct: 99 GKC-IRGIKGEPVAIGKLERFVADWARENGIK----PKKAEKLNGHKVAVIGSGPAGLTC 153
Query: 161 ATFLSRMGYDDITIYE 176
A L+++GY D+TI+E
Sbjct: 154 AGDLAKLGY-DVTIFE 168
>gi|254168413|ref|ZP_04875258.1| glutamate synthase (NADPH), homotetrameric [Aciduliprofundum boonei
T469]
gi|289595762|ref|YP_003482458.1| glutamate synthase (NADPH), homotetrameric [Aciduliprofundum boonei
T469]
gi|197622694|gb|EDY35264.1| glutamate synthase (NADPH), homotetrameric [Aciduliprofundum boonei
T469]
gi|289533549|gb|ADD07896.1| glutamate synthase (NADPH), homotetrameric [Aciduliprofundum boonei
T469]
Length = 476
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCAD--APCQKSCPTQI 58
+PEQ A I+ F +L F+ K EASRC++C APC K CP +
Sbjct: 12 VPEQDPQARIHNFNEVALGYTFELAKE----------EASRCIQCPYNFAPCIKGCPVNV 61
Query: 59 DIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGL 118
+I FI I + GA + I N L G VCP + C C + + INIG L
Sbjct: 62 NIPGFIKKILENDMKGALEVIHETNSLPGITGRVCPQEEQCEMNCVMGKLGD-KINIGKL 120
Query: 119 QQFATEVFKDMGI---SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIY 175
++F + ++ GI ++I P + K K+A++G GP+ L+ A+ L +MGY D+T+Y
Sbjct: 121 ERFVADYAREHGIMPETKIAPKNGK------KVAIVGSGPSGLTAASDLIKMGY-DVTVY 173
Query: 176 E 176
E
Sbjct: 174 E 174
>gi|237708973|ref|ZP_04539454.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
sp. 9_1_42FAA]
gi|229457035|gb|EEO62756.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
sp. 9_1_42FAA]
Length = 638
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LSE A+ EA RCL C + C CP I+I FI +I + AAK + + L C
Sbjct: 332 LSEEQAVTEAKRCLDCPNPTCMNGCPVGINIPRFIKNIERGEFLEAAKTLKETSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C A + IG L++FA + ++ G QI P+ + + K+A
Sbjct: 392 GRVCPQEKQCESQCTHLKAGHEAVAIGYLERFAADYERESG--QISVPEV-AEKNNIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 449 VIGSGPAGLSFAGDMAKQGY-DVTVFE 474
>gi|160894897|ref|ZP_02075671.1| hypothetical protein CLOL250_02447 [Clostridium sp. L2-50]
gi|156863328|gb|EDO56759.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. L2-50]
Length = 462
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RC+ C +A C K CP IDI FI + + A + I + L CG VCP C
Sbjct: 39 RCIGCKNAQCVKGCPVSIDIPGFIAHVKKGEFAEAFQVISKSSALPAVCGRVCPQETQCE 98
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + + P++IG L++F + ++ GI P+ + K+A+IG GP+ L+C
Sbjct: 99 GKC-IRGIKGDPVSIGKLERFVADWAREHGIK----PEPAAEKNGKKVAVIGSGPSGLTC 153
Query: 161 ATFLSRMGYDDITIYE 176
A L++MGY D+TI+E
Sbjct: 154 AGDLAKMGY-DVTIFE 168
>gi|251777881|ref|ZP_04820801.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243082196|gb|EES48086.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 463
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A+KEA RCL C + C + CP IDI FI ++ AAK I
Sbjct: 23 NFEEV-CLGYNEEEAVKEAKRCLGCKNPKCVEGCPVSIDIPGFIAKAKDGDFENAAKEIA 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C L E P+ IG L++F + + I AK
Sbjct: 82 KYSALPAVCGRVCPQESQCEGKCVLGIKGE-PVAIGKLEKFTADWSRKNNIDL-----AK 135
Query: 141 VD-FPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ KIA+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 TEALNGKKIAVIGSGPAGLTCAGDLAKRGY-DVTIFE 171
>gi|188587849|ref|YP_001922333.1| putative oxidoreductase [Clostridium botulinum E3 str. Alaska E43]
gi|188498130|gb|ACD51266.1| glutamate synthase (NADPH), homotetrameric [Clostridium botulinum
E3 str. Alaska E43]
Length = 463
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A+KEA RCL C + C + CP IDI FI ++ AAK I
Sbjct: 23 NFEEV-CLGYNEEEAVKEAKRCLGCKNPKCVEGCPVSIDIPGFIAKAKDGDFENAAKEIA 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C L E P+ IG L++F + + I AK
Sbjct: 82 KYSALPAVCGRVCPQESQCEGKCVLGIKGE-PVAIGKLEKFTADWSRKNNIDL-----AK 135
Query: 141 VD-FPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ KIA+IG GPA L+CA L++ GY D+TI+E
Sbjct: 136 TEALNGKKIAVIGSGPAGLTCAGDLAKRGY-DVTIFE 171
>gi|336406947|ref|ZP_08587589.1| hypothetical protein HMPREF0127_04902 [Bacteroides sp. 1_1_30]
gi|335948422|gb|EGN10130.1| hypothetical protein HMPREF0127_04902 [Bacteroides sp. 1_1_30]
Length = 766
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|182418273|ref|ZP_02949569.1| glutamate synthase, homotetrameric [Clostridium butyricum 5521]
gi|237668759|ref|ZP_04528743.1| glutamate synthase (NADPH), homotetrameric [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182377911|gb|EDT75454.1| glutamate synthase, homotetrameric [Clostridium butyricum 5521]
gi|237657107|gb|EEP54663.1| glutamate synthase (NADPH), homotetrameric [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 465
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ +E A+KEASRCL C + C + CP I+I F+ I +N+ AAK I
Sbjct: 23 NFEEV-CMGYNEEEAVKEASRCLNCKNPKCVEGCPVSINIPGFVAHIKEENFEEAAKEIS 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPPD 138
+ L CG VCP C G C L + I+IG L++F + ++ +S P +
Sbjct: 82 KYSSLPAVCGRVCPQEKQCEGKCVL-GIKGDSISIGKLERFTADWAAAHNVDLSATEPKN 140
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++ GY ++TI+E
Sbjct: 141 G------IKVAVIGSGPAGLTCAGDLAKKGY-EVTIFE 171
>gi|298481432|ref|ZP_06999624.1| glutamate synthase, small subunit [Bacteroides sp. D22]
gi|298272296|gb|EFI13865.1| glutamate synthase, small subunit [Bacteroides sp. D22]
Length = 766
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|423212320|ref|ZP_17198849.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
xylanisolvens CL03T12C04]
gi|392694766|gb|EIY87992.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
xylanisolvens CL03T12C04]
Length = 766
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|289548847|ref|YP_003473835.1| glutamate synthase (NADPH), homotetrameric [Thermocrinis albus DSM
14484]
gi|289182464|gb|ADC89708.1| glutamate synthase (NADPH), homotetrameric [Thermocrinis albus DSM
14484]
Length = 474
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 35 ALKEASRCLKCADA--PCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
AL EA RCL C DA C K+CP +DI FI I+ + GA + I NP CG V
Sbjct: 36 ALDEAQRCLFCRDAHQRCIKACPIGVDIPGFIRKITEGDLIGAYRVITLSNPFPSVCGRV 95
Query: 93 CPTSDLCMGGCNLY------AAEEG-PINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD 145
CP C G C LY +G P++IG L++F + + IS + + + +
Sbjct: 96 CPQEKQCEGACILYYDTVKGRRNKGLPVSIGALEKFVGDFVR---ISGVEVSEERANPTG 152
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++A++G GPA L+CA L+++G+ + +YE
Sbjct: 153 KRVAVVGAGPAGLACAYQLAKLGH-HVDVYE 182
>gi|306820652|ref|ZP_07454280.1| glutamate synthase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551262|gb|EFM39225.1| glutamate synthase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 476
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ + E A++E+ RCL C +A C +CP I+I FI I K+ GA + I
Sbjct: 31 NFDEVCYGYNLEE-AIEESKRCLSCKNARCIGTCPVGINIPEFIKKIIEKDIEGAGRVIA 89
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGI--SQIRPPD 138
+ L CG VCP C C + E P++IG L++F + G+ + PP
Sbjct: 90 ESSALPAVCGRVCPQESQCEMTCIMGIKNE-PVSIGKLERFVADTNMKNGVVFGEKLPPK 148
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+ A L+R GY D+TI+E
Sbjct: 149 ------NIKVAIIGAGPAGLTAAGDLARKGY-DVTIFE 179
>gi|295086895|emb|CBK68418.1| glutamate synthase (NADPH), homotetrameric [Bacteroides
xylanisolvens XB1A]
Length = 766
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ EA RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + KIA
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKIA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA L+ A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLAFAGDMAKYGY-DVTVFE 472
>gi|291550425|emb|CBL26687.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus torques
L2-14]
Length = 462
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA+RCL C +A C + CP I+I +FI + N A K I + L CG VCP
Sbjct: 34 AMEEATRCLNCKNAKCIQGCPVSINIPAFIHQVKEGNIEEAYKIIGKSSALPAICGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F D + P+ K+A+IG G
Sbjct: 94 QESQCEGKC-IRGIKGEPVSIGKLERFVA----DYALENDIKPEGAETMNGHKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L+++GY D+T++E
Sbjct: 149 PSGLTCAGDLAKLGY-DVTVFE 169
>gi|399992477|ref|YP_006572717.1| pyridine nucleotide-disulfide oxidoreductase-like protein
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
gi|398657032|gb|AFO90998.1| pyridine nucleotide-disulfide oxidoreductase-like protein
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
Length = 444
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
++ + +NF D+ H A A RC C DAPC +CPT IDI FI I +
Sbjct: 15 LSASEIADNFGDL-HPQYEAHEAAVAADRCYFCYDAPCMTACPTSIDIPQFIREIQTGHP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK I N LG C VCPT LC C AAE P+ IG LQ+ AT+ + G+
Sbjct: 74 EAAAKTILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRHATDTLMEKGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + +IA++G GPA L+ A L+ +G +D+ IYE
Sbjct: 134 ----PFTRAAATGKRIAVVGAGPAGLAAAHRLAMLG-NDVVIYE 172
>gi|423232252|ref|ZP_17218653.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei
CL02T00C15]
gi|423242763|ref|ZP_17223839.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei
CL02T12C06]
gi|392624553|gb|EIY18633.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei
CL02T00C15]
gi|392647206|gb|EIY40910.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei
CL02T12C06]
Length = 765
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LSE A+ EA RCL C + C CP I+I FI +I + AAK + + L C
Sbjct: 332 LSEEQAVTEAKRCLDCPNPTCMSGCPVGINIPRFIKNIERGEFLEAAKTLKETSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C A + IG L++FA + ++ G QI P+ + + K+A
Sbjct: 392 GRVCPQEKQCESQCTHLKAGHEAVAIGYLERFAADYERESG--QISVPEV-AEKNNIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 449 VIGSGPAGLSFAGDMAKQGY-DVTVFE 474
>gi|373497694|ref|ZP_09588215.1| glutamate synthase (NADPH), homotetrameric, partial [Fusobacterium
sp. 12_1B]
gi|371962764|gb|EHO80345.1| glutamate synthase (NADPH), homotetrameric, partial [Fusobacterium
sp. 12_1B]
Length = 651
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E A EASRC+ C + C + CP IDI +FI I + GA + I
Sbjct: 284 NFEEVCYGYNMEE-AQAEASRCISCKNPLCVQGCPVSIDIPAFIKKIKEGDMAGAGRIIA 342
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS-QIRPPDA 139
+ L CG VCP C G C L E P++IG L++F + GI +I+ +
Sbjct: 343 EYSNLPAVCGRVCPQETQCEGKCILGIKGE-PVSIGKLERFVGDWVIANGIEYEIKEKNN 401
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+ A L++MGY D+TIYE
Sbjct: 402 K------KVAVIGGGPAGLTAAGDLAKMGY-DVTIYE 431
>gi|170757075|ref|YP_001782425.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium botulinum
B1 str. Okra]
gi|169122287|gb|ACA46123.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Clostridium botulinum B1 str. Okra]
Length = 438
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP + FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTNPGKFIRSLRFRNFNGAVATIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ + + +GI + A + K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGRLQRYLADYEQSIGIKILEAVQATKE----KVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY +T++E
Sbjct: 135 PSGLAAAAQLALEGY-KVTVFE 155
>gi|242280951|ref|YP_002993080.1| oxidoreductase [Desulfovibrio salexigens DSM 2638]
gi|242123845|gb|ACS81541.1| glutamate synthase (NADPH), homotetrameric [Desulfovibrio
salexigens DSM 2638]
Length = 471
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MPEQ + F+ +L S+ A+ EA+RCL+C CQK CP +IDI
Sbjct: 14 MPEQPADVRNKNFSEVAL----------GYSKEEAMAEAARCLQCKKPLCQKGCPVEIDI 63
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
KSFI ++ + A + I N L CG VCP C G C L E P+ IG L++
Sbjct: 64 KSFIKHLADGDIPSAYRVIKETNALPAVCGRVCPQESQCEGSCILGKKYE-PVAIGRLER 122
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + F ++ P+ K+A IG GP+SL+ A +L+ G +T+YE
Sbjct: 123 FVADSFDSDSACEMITGHTACSLPNDQFKVACIGSGPSSLTVAGYLAARGV-PVTVYE 179
>gi|310780004|ref|YP_003968336.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Ilyobacter
polytropus DSM 2926]
gi|309749327|gb|ADO83988.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Ilyobacter
polytropus DSM 2926]
Length = 464
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ SE A+ EA RC++C C CP + I FI ++ N+ A +
Sbjct: 24 NFKEV-SLGYSEEEAINEAKRCIQCKSPACVSGCPVNVHIPQFINKVAEGNFEEAYDILV 82
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C C + + P+ IG L++F + F + G + + K
Sbjct: 83 EQNSLPAICGRVCPQEKQCESKC-VRGMKGEPVGIGRLERFVADWFIENG----KTKEKK 137
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + K+A+ G GPA L+CA L++ GY D+TI+E
Sbjct: 138 AENNNIKVAVTGAGPAGLACAGELAKYGY-DVTIFE 172
>gi|330998358|ref|ZP_08322182.1| glutamate synthase [Paraprevotella xylaniphila YIT 11841]
gi|329568464|gb|EGG50269.1| glutamate synthase [Paraprevotella xylaniphila YIT 11841]
Length = 785
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LS A+ EA RCL CA+ C + CP I+I SFI +I + AA+ + S + L C
Sbjct: 353 LSAEQAMTEARRCLDCANPTCMQGCPVSINIPSFIKNIERGEFLNAARVLKSTSALPAVC 412
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E + IG L++FA + ++ G+ + P A + K+A
Sbjct: 413 GRVCPQEKQCESQCIHLKMNEPAVAIGYLERFAADFERESGMMSV-PECAPAN--GIKVA 469
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 470 VIGSGPAGLSFAGDMAKYGY-DVTVFE 495
>gi|257438192|ref|ZP_05613947.1| glutamate synthase, homotetrameric [Faecalibacterium prausnitzii
A2-165]
gi|257199354|gb|EEU97638.1| glutamate synthase (NADPH), homotetrameric [Faecalibacterium
prausnitzii A2-165]
Length = 464
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF+++ +E A+ EA RC+ C + PCQ CP IDI FI ++ ++ A + I
Sbjct: 22 KNFEEVA-LGYTEEMAVNEAKRCIHCKNKPCQTGCPVGIDIPEFIGHVAEGDFEAAYQVI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD-MGISQIRPPD 138
+ L CG VCP C G C E P+ IG L++F + ++ + + I P
Sbjct: 81 ARSSSLPAVCGRVCPQESQCEGKCTRGIKNE-PVGIGRLERFVADWHRENVHTAPIVPA- 138
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+ A L+++GY +T+YE
Sbjct: 139 ----WNGHKVAIIGAGPAGLTAAGDLAKLGY-KVTVYE 171
>gi|78486297|ref|YP_392222.1| glutamate synthase subunit beta [Thiomicrospira crunogena XCL-2]
gi|78364583|gb|ABB42548.1| glutamate synthase (NADPH) small subunit [Thiomicrospira crunogena
XCL-2]
Length = 470
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF++I +T + A+ +A RCL C + C+ +CP I +++ +S N AA+
Sbjct: 26 NFEEI-YTEFDPQRAMAQADRCLHCGNPYCEWACPVHNYIPNWLKLVSEGNIIEAAELSH 84
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG +CP LC C L G + IG ++++ T+ DMG + P
Sbjct: 85 QTNSLPEMCGRICPQDRLCEEACTLEDTNFGAVTIGAVEKYITDTATDMGWT---PTLDN 141
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
V D K+A+IG GPA L CA L R G I ++EK
Sbjct: 142 VTMTDKKVAIIGSGPAGLGCADILIRNGVKPI-VFEKE 178
>gi|288818264|ref|YP_003432612.1| glutamate synthase (NADPH) [Hydrogenobacter thermophilus TK-6]
gi|384129024|ref|YP_005511637.1| glutamate synthase (NADPH), homotetrameric [Hydrogenobacter
thermophilus TK-6]
gi|288787664|dbj|BAI69411.1| glutamate synthase (NADPH) [Hydrogenobacter thermophilus TK-6]
gi|308751861|gb|ADO45344.1| glutamate synthase (NADPH), homotetrameric [Hydrogenobacter
thermophilus TK-6]
Length = 475
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 35 ALKEASRCLKCADAP--CQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
AL EA RCL C DA C K CP +DI FI I+ + GA K I + CG V
Sbjct: 37 ALDEAKRCLLCKDADKRCIKGCPVNVDIPGFIKKITEGDLVGAYKKIIETDLFPSICGRV 96
Query: 93 CPTSDLCMGGCNLY------AAEEG-PINIGGLQQFATEVFKDMGI---SQIRPPDAKVD 142
CP C G C LY +G P++IG L++F + + GI QI+ P K
Sbjct: 97 CPQERQCEGSCILYYDTVRGRKNKGLPVSIGALEKFVGDFIRISGIQIEEQIKAPTGK-- 154
Query: 143 FPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A++G GPA LSCA L + G+ + IYE
Sbjct: 155 ----KVAIVGAGPAGLSCAYDLLKAGH-KVHIYE 183
>gi|323483701|ref|ZP_08089082.1| hypothetical protein HMPREF9474_00831 [Clostridium symbiosum
WAL-14163]
gi|323692669|ref|ZP_08106898.1| hypothetical protein HMPREF9475_01761 [Clostridium symbiosum
WAL-14673]
gi|323402978|gb|EGA95295.1| hypothetical protein HMPREF9474_00831 [Clostridium symbiosum
WAL-14163]
gi|323503223|gb|EGB19056.1| hypothetical protein HMPREF9475_01761 [Clostridium symbiosum
WAL-14673]
Length = 465
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA RCL C +A C CP IDI +FI + AA+ I + L CG VCP
Sbjct: 37 AMAEAERCLNCKNAKCIAGCPVAIDIPAFIEEVKKGEIEEAARVIAKASALPAVCGRVCP 96
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F + ++ G P+A K+A+IG G
Sbjct: 97 QETQCEGQC-IRGIKGEPVSIGKLERFVADWSREHGFV----PEAPEKTNGKKVAVIGSG 151
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P L+CA L+++GY ++TI+E
Sbjct: 152 PCGLTCAGDLAKLGY-EVTIFE 172
>gi|442804010|ref|YP_007372159.1| NADPH-dependent glutamate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739860|gb|AGC67549.1| NADPH-dependent glutamate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 465
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ +E A++EA RCL C + PC CP + I FI+ I+ + A I
Sbjct: 22 NFKEVA-LGYTEEMAVEEAKRCLNCKNRPCVSGCPVNVKIPEFISLIAEGRFEEAYLKIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP + C C + + P+ IG L++FA + + ++ P +
Sbjct: 81 ETNNLPAICGRVCPQENQCEKYC-VRGKKGEPVGIGRLERFAADWY----MAHREPETPE 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ + K+A+IG GPA L+CA L++MGY +TI+E
Sbjct: 136 IPKNNKKVAVIGSGPAGLTCAADLAKMGY-SVTIFE 170
>gi|355622691|ref|ZP_09046781.1| glutamate synthase, homotetrameric [Clostridium sp. 7_3_54FAA]
gi|354822855|gb|EHF07205.1| glutamate synthase, homotetrameric [Clostridium sp. 7_3_54FAA]
Length = 465
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA RCL C +A C CP IDI +FI + AA+ I + L CG VCP
Sbjct: 37 AMAEAERCLNCKNAKCIAGCPVAIDIPAFIEEVKKGEIEEAARVIAKASALPAVCGRVCP 96
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F + ++ G P+A K+A+IG G
Sbjct: 97 QETQCEGQC-IRGIKGEPVSIGKLERFVADWSREHGFV----PEAPEKTNGKKVAVIGSG 151
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P L+CA L+++GY ++TI+E
Sbjct: 152 PCGLTCAGDLAKLGY-EVTIFE 172
>gi|402310240|ref|ZP_10829206.1| glutamate synthase (NADPH), homotetrameric [Eubacterium sp. AS15]
gi|400368692|gb|EJP21699.1| glutamate synthase (NADPH), homotetrameric [Eubacterium sp. AS15]
Length = 476
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ + E A++E+ RCL C +A C +CP I+I FI I K+ GA + I
Sbjct: 31 NFDEVCYGYNLEE-AIEESKRCLSCKNAKCIGTCPVGINIPEFIKKIIEKDIEGAGRIIA 89
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGI--SQIRPPD 138
+ L CG VCP C C + E P++IG L++F + G+ + PP
Sbjct: 90 ESSALPAVCGRVCPQESQCEMTCIMGIKNE-PVSIGKLERFVADTNMKNGVVFGEKLPPK 148
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+ A L+R GY D+TI+E
Sbjct: 149 ------NIKVAIIGAGPAGLTAAGDLARKGY-DVTIFE 179
>gi|400754162|ref|YP_006562530.1| pyridine nucleotide-disulfide oxidoreductase-like protein
[Phaeobacter gallaeciensis 2.10]
gi|398653315|gb|AFO87285.1| pyridine nucleotide-disulfide oxidoreductase-like protein
[Phaeobacter gallaeciensis 2.10]
Length = 444
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
++ + +NF D+ H A A RC C DAPC +CPT IDI FI I +
Sbjct: 15 LSASEIADNFGDL-HPQYEAHEAAVAADRCYFCYDAPCMTACPTSIDIPQFIREIQTGHP 73
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
AAK I N LG C VCPT LC C AAE P+ IG LQ+ AT+ + G+
Sbjct: 74 EAAAKTILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRHATDTLMEKGVH 133
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN------------TY 180
P + +IA++G GPA L+ A L+ +G +D+ IYE Y
Sbjct: 134 ----PFTRAAATGKRIAVVGAGPAGLAAAHRLAMLG-NDVVIYEARPKAGGLNEFGIAAY 188
Query: 181 DMVTNVSPRIVK------GTTSRHLYGPEQGSFLNIELISEKTAYQWVYYS 225
N + R V G T YG + G+ L+++ + K Y V+ S
Sbjct: 189 KSTENFASREVDWLLQIGGITVE--YGKKLGAELSLDAL--KADYDAVFLS 235
>gi|404367147|ref|ZP_10972520.1| glutamate synthase (NADPH), homotetrameric, partial [Fusobacterium
ulcerans ATCC 49185]
gi|404288795|gb|EJZ44684.1| glutamate synthase (NADPH), homotetrameric, partial [Fusobacterium
ulcerans ATCC 49185]
Length = 599
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E A EASRC+ C + C + CP IDI +FI I + GA + I
Sbjct: 315 NFEEVCYGYNMEE-AQAEASRCISCKNPLCVQGCPVSIDIPAFIKKIKEGDMAGAGRIIA 373
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS-QIRPPDA 139
+ L CG VCP C G C L E P++IG L++F + GI +I+ +
Sbjct: 374 EYSNLPAVCGRVCPQETQCEGKCILGIKGE-PVSIGKLERFVGDWVIANGIEYEIKEKNN 432
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+ A L++MGY D+TIYE
Sbjct: 433 K------KVAVIGGGPAGLTAAGDLAKMGY-DVTIYE 462
>gi|312134565|ref|YP_004001903.1| glutamate synthase (nadph), homotetrameric [Caldicellulosiruptor
owensensis OL]
gi|311774616|gb|ADQ04103.1| glutamate synthase (NADPH), homotetrameric [Caldicellulosiruptor
owensensis OL]
Length = 461
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NFD++ + A+ EA RCL+C +APC CP ++ I FI I + +
Sbjct: 18 IHNFDEVCLGYTPDE-AIMEAQRCLQCKNAPCVNGCPVEVKIPEFIQLIKENKFKESYFK 76
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I N L CG VCP C C + + PI IG L++F + F+ + P
Sbjct: 77 ILETNLLPAICGRVCPQETQCEQNC-VRGIKGEPIAIGKLERFVADWFRQNCEFEFSKPQ 135
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LSCA+ L+++GY ++TI+E
Sbjct: 136 PN----GRKVAIIGSGPAGLSCASSLAKIGY-NVTIFE 168
>gi|423217332|ref|ZP_17203828.1| glutamate synthase (NADPH), homotetrameric [Bacteroides caccae
CL03T12C61]
gi|392628491|gb|EIY22517.1| glutamate synthase (NADPH), homotetrameric [Bacteroides caccae
CL03T12C61]
Length = 763
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ E+ RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAITESKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + K+A
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKVA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLSFAGDMAKYGY-DVTVFE 472
>gi|153807616|ref|ZP_01960284.1| hypothetical protein BACCAC_01898 [Bacteroides caccae ATCC 43185]
gi|149129978|gb|EDM21190.1| glutamate synthase (NADPH), homotetrameric [Bacteroides caccae ATCC
43185]
Length = 763
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+ A+ E+ RCL CA+ C + CP IDI FI +I + AAK + + L C
Sbjct: 330 LTAEQAMTESKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C E P+ IG L++FA + ++ G QI P + K+A
Sbjct: 390 GRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAADYERESG--QISVP-VIAEKNGIKVA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLSFAGDMAKYGY-DVTVFE 472
>gi|139439415|ref|ZP_01772856.1| Hypothetical protein COLAER_01876 [Collinsella aerofaciens ATCC
25986]
gi|133775194|gb|EBA39014.1| glutamate synthase (NADPH), homotetrameric [Collinsella aerofaciens
ATCC 25986]
Length = 469
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
+E AL EA RCL C C + CP I+I FI I K++ GA I D+ L C
Sbjct: 38 FTEEMALAEAERCLNCKKPFCVEGCPVNINIPRFIEQIREKDFGGALDTIREDSMLPAIC 97
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP + C G C + + P+ IG L++F + + ++ P + K K+A
Sbjct: 98 GRVCPQENQCEGKC-IRGKKSEPVAIGQLERFLGDRPELASTPKMAPKNGK------KVA 150
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
++G GP+ ++CA L+R G+ D+T++E
Sbjct: 151 VVGSGPSGITCAGELARNGF-DVTVFE 176
>gi|147677516|ref|YP_001211731.1| putative oxidoreductase [Pelotomaculum thermopropionicum SI]
gi|146273613|dbj|BAF59362.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Pelotomaculum thermopropionicum SI]
Length = 468
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 10/138 (7%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCL+C + PC++ CP ++DI +FI ++ +++ GA K I N L CG VCP + C
Sbjct: 45 RCLQCKNEPCRQGCPVEVDIPAFIRLVAGRDFAGAIKKIKEKNALPAVCGRVCPQENQCE 104
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGI--SQIRPPDAKVDFPDTKIALIGCGPASL 158
C + E P+ IG L++F + G+ + PP K K+A++G GPA L
Sbjct: 105 KYCTMGKKYE-PVAIGRLERFCADWELAGGVLPQKTAPPTGK------KVAVVGSGPAGL 157
Query: 159 SCATFLSRMGYDDITIYE 176
+CA L+++G+ +T++E
Sbjct: 158 TCAADLAKLGH-RVTVFE 174
>gi|323702773|ref|ZP_08114433.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
nigrificans DSM 574]
gi|323532290|gb|EGB22169.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
nigrificans DSM 574]
Length = 470
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ E A+ EASRCL C C++ CP +DI FI + + + AA+ I
Sbjct: 22 KNFDEVA-LGYDEETAVAEASRCLNCKKPMCKEGCPVGVDIPEFIALVKERKFDEAARVI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
N L CG VCP + C C + E P+ IG L++F + D +
Sbjct: 81 KRTNALPAVCGRVCPQENQCEKNCIVGKKHE-PVAIGRLERFVGDYIVD------KDEQP 133
Query: 140 KVDFPDT-KIALIGCGPASLSCATFLSRMGYDDITIYE 176
+V P K+A++G GPA L+CA L+R+G+ +TI+E
Sbjct: 134 EVAEPTGYKVAVVGSGPAGLACAADLARLGH-SVTIFE 170
>gi|304439664|ref|ZP_07399566.1| glutamate synthase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371844|gb|EFM25448.1| glutamate synthase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 761
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NF+++ + +E A +EA+RCL+C + C++ CP IDI FI I+ N+ +AK +
Sbjct: 320 HNFEEVCYG-YNEEEARREANRCLQCKNPKCRQGCPVNIDIPGFIKEIASGNFEQSAKVL 378
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
L CG VCP C C L A ++IG L++F + ++ P
Sbjct: 379 ALYTALPAVCGRVCPQETQCEAQCVL-KARGNSVSIGKLERFTADKSREEKYKLFDKPRQ 437
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++MGY ++TI+E
Sbjct: 438 N----GHKVAVIGAGPAGLTCAGDLAKMGY-EVTIFE 469
>gi|435853298|ref|YP_007314617.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
gi|433669709|gb|AGB40524.1| NADPH-dependent glutamate synthase, homotetrameric [Halobacteroides
halobius DSM 5150]
Length = 460
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 1 MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI 60
MP+Q + +N F+ +L +D E A+KEA RCL+C++ C+ CP ++DI
Sbjct: 10 MPQQDANKRVNNFSEVAL--GYD--------EETAIKEAERCLQCSNPKCKAGCPVEVDI 59
Query: 61 KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ 120
FI ++ + AAK + N L CG VCP + C C + E P+ IG L++
Sbjct: 60 PEFIELVAEGKFKKAAKKVKEKNNLPAICGRVCPQEEQCEAECIVGIKNE-PVGIGRLER 118
Query: 121 FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F + +D +++P V K+A++G GPA L+ L++MGY +TI+E
Sbjct: 119 FVADYIRDS--EKVKP----VKQDKGKVAVVGAGPAGLTAGADLAKMGY-QVTIFE 167
>gi|352516816|ref|YP_004886133.1| glutamate synthase [Tetragenococcus halophilus NBRC 12172]
gi|348600923|dbj|BAK93969.1| glutamate synthase [Tetragenococcus halophilus NBRC 12172]
Length = 473
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NNF+++ E+G L EASRCL+C DAPC K CP IDI FI +I + A + I
Sbjct: 21 NNFEEVAMGYTVEQGKL-EASRCLQCKDAPCIKHCPVMIDIPGFIQAIKDDDMPKAYQII 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE-GPINIGGLQQFATEVFKDMGISQIRPPD 138
+ L CG VCP C C L +++ P+ IG L++ D Q D
Sbjct: 80 NRYSNLPAICGRVCPQEKQCEMVCKLGKSKKFEPVAIGKLERLVA----DWSFEQ-SSKD 134
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
V K+A++G GP+ L+ A L++MGY + TI+E
Sbjct: 135 KDVKLDKGKVAVVGGGPSGLTVAGDLAKMGY-ETTIFE 171
>gi|313115599|ref|ZP_07801058.1| glutamate synthase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622114|gb|EFQ05610.1| glutamate synthase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 464
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ +E A+ EA RC+ C + PCQ CP IDI FI ++ ++ A + I
Sbjct: 23 NFKEVA-LGYTEEMAVNEAKRCVHCKNKPCQTGCPVGIDIPEFIGHVAEGDFEAAYQVIN 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD-MGISQIRPPDA 139
+ L CG VCP C G C E P+ IG L++F + ++ + + I P
Sbjct: 82 RSSSLPAVCGRVCPQESQCEGKCTRGIKNE-PVGIGRLERFVADWHRENVHTAPIVP--- 137
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+ A L+++GY +T+YE
Sbjct: 138 --EWNGHKVAIIGAGPAGLTAAGDLAKLGY-KVTVYE 171
>gi|282859536|ref|ZP_06268641.1| glutamate synthase (NADPH), homotetrameric [Prevotella bivia
JCVIHMP010]
gi|424900965|ref|ZP_18324507.1| NADPH-dependent glutamate synthase, homotetrameric [Prevotella
bivia DSM 20514]
gi|282587764|gb|EFB92964.1| glutamate synthase (NADPH), homotetrameric [Prevotella bivia
JCVIHMP010]
gi|388593165|gb|EIM33404.1| NADPH-dependent glutamate synthase, homotetrameric [Prevotella
bivia DSM 20514]
Length = 768
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EA RCL C + C K CP DI +FI +I N GA K + + L CG VCP
Sbjct: 339 AIEEAHRCLDCGNPSCVKGCPVNNDIPAFIKNIERGNIIGAYKVLKNTTSLPAICGRVCP 398
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C P+ IGGL+QF + ++ I P V + K+A++G G
Sbjct: 399 HEKQCEGNCIHNKMNSKPVGIGGLEQFVADHIRENNIQLATP---TVTMNNIKVAVVGSG 455
Query: 155 PASLSCATFLSRMGY 169
PA LS A +++ G+
Sbjct: 456 PAGLSFAGEMAKKGF 470
>gi|345516608|ref|ZP_08796097.1| hypothetical protein BSEG_03100 [Bacteroides dorei 5_1_36/D4]
gi|423241871|ref|ZP_17222982.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei
CL03T12C01]
gi|229436882|gb|EEO46959.1| hypothetical protein BSEG_03100 [Bacteroides dorei 5_1_36/D4]
gi|392640399|gb|EIY34200.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei
CL03T12C01]
Length = 765
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E A+ EA RCL C + C CP I+I FI +I + AAK + + + L C
Sbjct: 332 LNEEQAITEAKRCLDCPNPTCMNGCPVGINIPKFIKNIERGEFLEAAKTLKATSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C A + IG L++FA + ++ G QI P+ + + K+A
Sbjct: 392 GRVCPQEKQCESQCTHLKAGHEAVAIGYLERFAADYERESG--QISVPEV-AEKNNIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 449 VIGSGPAGLSFAGDMAKQGY-DVTVFE 474
>gi|281423628|ref|ZP_06254541.1| glutamate synthase, homotetrameric [Prevotella oris F0302]
gi|281402180|gb|EFB33011.1| glutamate synthase, homotetrameric [Prevotella oris F0302]
Length = 459
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
S +N+F + S R A+ EA +CL+C C+K CP + +I SFI ++S N
Sbjct: 10 SVEEINSFQAVDEG-FSMREAIAEAKKCLQCKIPQCRKGCPIENEIPSFIHALSMGNMGD 68
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
A I + L CG VCP C G C + + PI IG L+QF + M +++
Sbjct: 69 AMHIINEKSNLPAICGRVCPHEKQCQGHC-VMNKKGSPIQIGKLEQFIADFDTKMNLTRE 127
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
R P KIA+IG GPA L+ A L+R G+ +TIYE
Sbjct: 128 RLPQKD----RGKIAVIGSGPAGLTVAGDLARKGF-SVTIYE 164
>gi|255528240|ref|ZP_05395059.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
gi|255508064|gb|EET84485.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
Length = 462
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
S+ A++EASRCL C + C CP I I FI + N+ AAK I + L CG
Sbjct: 29 SKEEAMQEASRCLNCKNPKCVGDCPVTISIPEFIQQVKEGNFEEAAKIIAKSSALPAVCG 88
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD--MGISQIRPPDAKVDFPDTKI 148
VCP C G C L E + IG L++F + ++ + +S+ + + K K+
Sbjct: 89 RVCPQESQCEGKCVLGIKGEA-VAIGKLERFVADWSRENNIDLSETKLKNGK------KV 141
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GPA L+CA L+++GY ++TI+E
Sbjct: 142 AVIGSGPAGLTCAGDLAKLGY-EVTIFE 168
>gi|212692030|ref|ZP_03300158.1| hypothetical protein BACDOR_01525 [Bacteroides dorei DSM 17855]
gi|212665422|gb|EEB25994.1| glutamate synthase (NADPH), homotetrameric [Bacteroides dorei DSM
17855]
Length = 765
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E A+ EA RCL C + C CP I+I FI +I + AAK + + + L C
Sbjct: 332 LNEEQAITEAKRCLDCPNPTCMNGCPVGINIPKFIKNIERGEFLEAAKTLKATSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C A + IG L++FA + ++ G QI P+ + + K+A
Sbjct: 392 GRVCPQEKQCESQCTHLKAGHEAVAIGYLERFAADYERESG--QISVPEV-AEKNNIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 449 VIGSGPAGLSFAGDMAKQGY-DVTVFE 474
>gi|334341592|ref|YP_004546572.1| glutamate synthase (NADPH) homotetrameric [Desulfotomaculum ruminis
DSM 2154]
gi|334092946|gb|AEG61286.1| glutamate synthase (NADPH), homotetrameric [Desulfotomaculum
ruminis DSM 2154]
Length = 468
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NF ++ SE A+ EA RCL C C++ CP +DI FI + + AAK I
Sbjct: 22 KNFSEVA-LGYSEEVAMAEAGRCLSCKKPFCRQGCPVGVDIPQFIALVKEGKFDEAAKVI 80
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE--VFKDMGISQIRPP 137
N L CG VCP C C + E P+ IG L++F + + KD + Q P
Sbjct: 81 KRTNALPAVCGRVCPQEHQCEKFCIVGKKNE-PVAIGRLERFVGDYVMHKDEPVEQAEPT 139
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
KV A++G GPA L+CA L+R+G+ D+T++E
Sbjct: 140 GYKV-------AIVGSGPAGLACAADLARLGH-DVTMFE 170
>gi|219852425|ref|YP_002466857.1| glutamate synthase (NADPH), homotetrameric [Methanosphaerula
palustris E1-9c]
gi|219546684|gb|ACL17134.1| glutamate synthase (NADPH), homotetrameric [Methanosphaerula
palustris E1-9c]
Length = 448
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA RCL+C C CP IDI +FI++I+ ++ AA I N L CG VCP
Sbjct: 25 AILEAERCLQCKKPLCVTGCPVGIDIPAFISAIAAGDFSVAATTIKEQNMLPAICGRVCP 84
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C L ++ PINIG L++FA + ++ G S + + ++A++G G
Sbjct: 85 QETQCEGACVLK-NKDTPINIGALERFAADWERERGFSAEQKSREQT---GRRVAVVGSG 140
Query: 155 PASLSCATFLSRMGYDDITIYE 176
PA L+ A L+R G+ +TI+E
Sbjct: 141 PAGLTAAAELARRGH-KVTIFE 161
>gi|288928176|ref|ZP_06422023.1| glutamate synthase, small subunit [Prevotella sp. oral taxon 317
str. F0108]
gi|288331010|gb|EFC69594.1| glutamate synthase, small subunit [Prevotella sp. oral taxon 317
str. F0108]
Length = 787
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ AL EA RCL CA C + CP I+I SFI +I + AAK + + L C
Sbjct: 350 LTKELALMEAKRCLDCAKPTCMEGCPVSINIPSFIKNIERGQFLAAAKVLKDTSALPAVC 409
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRPPDAKVDFPDT 146
G VCP C C E + IG L++FA + ++ G + ++ P +
Sbjct: 410 GRVCPQEKQCESRCVHLKMNEPAVAIGYLERFAADYERESGNISVPELAPANG------I 463
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA++G GPA LS A +++ GY D+T++E
Sbjct: 464 KIAVVGSGPAGLSFAGDMAKFGY-DVTVFE 492
>gi|154482420|ref|ZP_02024868.1| hypothetical protein EUBVEN_00087 [Eubacterium ventriosum ATCC
27560]
gi|149736739|gb|EDM52625.1| glutamate synthase (NADPH), homotetrameric [Eubacterium ventriosum
ATCC 27560]
Length = 461
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E A++EA+RC+ C + PC CP + I FI ++ + A K I
Sbjct: 22 NFEEVALGYTKEM-AMEEATRCINCKNKPCMSGCPVCVRIPEFIAKVAAGEFEEAYKIIT 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
S N L CG VCP + C G C + + P++IG L++F D ++ K
Sbjct: 81 STNGLPAVCGRVCPQENQCEGKC-IRGIKGEPVSIGRLERFVA----DYHMAHSNDDAVK 135
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A++G GPA L+CA L+++GY ++TI+E
Sbjct: 136 PESNGIKVAVVGAGPAGLTCAGDLAKLGY-EVTIFE 170
>gi|168213046|ref|ZP_02638671.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
CPE str. F4969]
gi|170715368|gb|EDT27550.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
CPE str. F4969]
Length = 467
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + C + CP ++I SFI+ I ++ + + +
Sbjct: 22 NFKEV-SLGYGEEEAIEEANRCLGCKNPKCVEGCPVSVNIPSFISFIKKGDFSASFEELS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C G C L E P+ IG L++F + ++ +S ++ +
Sbjct: 81 KYNALPAVCGRVCPQESQCEGKCVLGIKGE-PLAIGQLERFIADFARNNKLSSLKKSEKI 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+++GY +TI+E
Sbjct: 140 LE----KVAVIGSGPAGLTCAGELAKLGY-RVTIFE 170
>gi|410098583|ref|ZP_11293560.1| glutamate synthase (NADPH), homotetrameric [Parabacteroides
goldsteinii CL02T12C30]
gi|409221885|gb|EKN14833.1| glutamate synthase (NADPH), homotetrameric [Parabacteroides
goldsteinii CL02T12C30]
Length = 490
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ A++EA RCL C + C + CP I+I +FI +I + AAK + + L C
Sbjct: 56 LTKEQAMQEAQRCLDCPNPTCMEGCPVSINIPTFIKNIERGEFLEAAKVLKETSALPAVC 115
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C ++ P+ IG L++FA + ++ G I P+ + K+A
Sbjct: 116 GRVCPQEKQCESKCIHLKMKKAPVAIGYLERFAADYERESG--SISVPEV-AEKNGIKVA 172
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 173 VIGSGPAGLSFAGDMAKRGY-DVTVFE 198
>gi|409913504|ref|YP_006891969.1| NADH-dependent ferredoxin:NADP+ oxidoreductase subunit alpha
[Geobacter sulfurreducens KN400]
gi|298507085|gb|ADI85808.1| NADH-dependent ferredoxin:NADP+ oxidoreductase, alpha subunit
[Geobacter sulfurreducens KN400]
Length = 470
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ E A++EA RC++C + C CP + I FIT+++ N AA+ +
Sbjct: 28 RNFDEVNRGLTPEE-AVREAQRCIRCTNRQCVAGCPVGVSIPEFITALADGNLREAARIL 86
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQF----ATEVFKDMGISQIR 135
DN L CG VCP C C + + P+ IG L++F AT ++G +
Sbjct: 87 TRDNALPAVCGRVCPQETQCEAKC-VRGIKGEPVAIGYLERFVADWATTNAAELGDEPLP 145
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + ++A++GCGPA L+ A L+R G+ +TI+E
Sbjct: 146 PSTGR------RVAVVGCGPAGLTAAGELARKGH-GVTIFE 179
>gi|294775309|ref|ZP_06740832.1| glutamate synthase (NADPH), homotetrameric [Bacteroides vulgatus
PC510]
gi|294450886|gb|EFG19363.1| glutamate synthase (NADPH), homotetrameric [Bacteroides vulgatus
PC510]
Length = 765
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L+E A+ EA RCL C + C CP I+I FI +I + AAK + + + L C
Sbjct: 332 LNEEQAVTEAKRCLDCPNPTCMNGCPVGINIPKFIKNIERGEFLEAAKTLKATSALPAVC 391
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C A + IG L++FA + ++ G QI P+ + + K+A
Sbjct: 392 GRVCPQEKQCESQCTHLKAGHEAVAIGYLERFAADYERESG--QISVPEV-AEKNNIKVA 448
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 449 VIGSGPAGLSFAGDMAKQGY-DVTVFE 474
>gi|325263872|ref|ZP_08130605.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. D5]
gi|324030910|gb|EGB92192.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp. D5]
Length = 462
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+ EA+RCL C +A C CP IDI FI + N A K I + L CG VCP
Sbjct: 34 AMDEATRCLGCKNAKCIDGCPVAIDIPGFIKEVKEGNIEEAYKVIGKSSALPAICGRVCP 93
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
C G C + + P++IG L++F + + I + P K+A+IG G
Sbjct: 94 QESQCEGKC-IRGIKGEPVSIGKLERFVADYALEHDIKPVCPETNN----GRKVAVIGSG 148
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+CA L++MGY D+T++E
Sbjct: 149 PSGLTCAGDLAKMGY-DVTVFE 169
>gi|422874127|ref|ZP_16920612.1| putative oxidoreductase [Clostridium perfringens F262]
gi|380304878|gb|EIA17162.1| putative oxidoreductase [Clostridium perfringens F262]
Length = 468
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + C + CP ++I SFI+ I ++ + + +
Sbjct: 22 NFKEV-SLGYGEEEAIEEANRCLGCKNPKCVEGCPVSVNIPSFISFIKKGDFSASFEELS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C G C L E P+ IG L++F + ++ +S ++ +
Sbjct: 81 KYNALPAVCGRVCPQESQCEGKCVLGIKGE-PLAIGQLERFIADFARNNKLSSLKKSEKI 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+++GY +TI+E
Sbjct: 140 LE----KVAVIGSGPAGLTCAGELAKLGY-RVTIFE 170
>gi|18310236|ref|NP_562170.1| oxidoreductase [Clostridium perfringens str. 13]
gi|110798955|ref|YP_695906.1| oxidoreductase [Clostridium perfringens ATCC 13124]
gi|168209621|ref|ZP_02635246.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
B str. ATCC 3626]
gi|168217102|ref|ZP_02642727.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
NCTC 8239]
gi|182624199|ref|ZP_02951985.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
D str. JGS1721]
gi|18144915|dbj|BAB80960.1| glutamate synthase beta subunit [Clostridium perfringens str. 13]
gi|110673602|gb|ABG82589.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
ATCC 13124]
gi|170712223|gb|EDT24405.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
B str. ATCC 3626]
gi|177910613|gb|EDT72981.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
D str. JGS1721]
gi|182380825|gb|EDT78304.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
NCTC 8239]
Length = 468
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + C + CP ++I SFI+ I ++ + + +
Sbjct: 22 NFKEV-SLGYGEEEAIEEANRCLGCKNPKCVEGCPVSVNIPSFISFIKKGDFSASFEELS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C G C L E P+ IG L++F + ++ +S ++ +
Sbjct: 81 KYNALPAVCGRVCPQESQCEGKCVLGIKGE-PLAIGQLERFIADFARNNKLSSLKKSEKI 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+++GY +TI+E
Sbjct: 140 LE----KVAVIGSGPAGLTCAGELAKLGY-RVTIFE 170
>gi|347731693|ref|ZP_08864781.1| glutamate synthase (NADPH), homotetrameric [Desulfovibrio sp. A2]
gi|347519500|gb|EGY26657.1| glutamate synthase (NADPH), homotetrameric [Desulfovibrio sp. A2]
Length = 481
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF+++ +++ A +EA RCL+C + C K CP ++ I+ FI ++ + GA +
Sbjct: 30 IRNFEEVA-LGYTQQMATEEAKRCLQCKNPKCVKGCPVEVPIRDFIGQLAKGDLEGAYRT 88
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I S N L CG VCP + C G C L A + P+ IG L+++ + + M +
Sbjct: 89 IKSTNSLPGVCGRVCPQENQCEGACVLNAKGQ-PVAIGRLERYVADTY--MALDACEHLS 145
Query: 139 AK-----VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
AK VD P+ ++A IG GPASL+ A +LS G +T++E
Sbjct: 146 AKLTCPAVD-PELRVACIGSGPASLTVAGYLSSRGI-KVTVFE 186
>gi|375082793|ref|ZP_09729839.1| putative oxidoreductase [Thermococcus litoralis DSM 5473]
gi|374742490|gb|EHR78882.1| putative oxidoreductase [Thermococcus litoralis DSM 5473]
Length = 476
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSIS------HKNYYGAAKAIFSDNPLGLT 88
A+KEA RCL+C APC + CP IDI FI + K A + I++ N L
Sbjct: 35 AVKEAERCLQCNPAPCTQGCPVHIDIPGFIRKLRENKDNPEKAVKEALEVIWACNTLPAI 94
Query: 89 CGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ--IRPPDAKVDFPDT 146
G VCP D C C + E PINIG L++F + ++ GI + ++ K++
Sbjct: 95 TGRVCPQEDQCEAPCVMGKVGE-PINIGKLERFVADYAREKGIDEELLQEIIPKIEKKKE 153
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA L+CA L++ GY +TI+E
Sbjct: 154 KVAVIGAGPAGLTCAAELAKEGY-QVTIFE 182
>gi|422345922|ref|ZP_16426836.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
WAL-14572]
gi|373227136|gb|EHP49456.1| glutamate synthase (NADPH), homotetrameric [Clostridium perfringens
WAL-14572]
Length = 468
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ E A++EA+RCL C + C + CP ++I SFI+ I ++ + + +
Sbjct: 22 NFKEV-SLGYGEEEAIEEANRCLGCKNPKCVEGCPVSVNIPSFISFIKKGDFSASFEELS 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L CG VCP C G C L E P+ IG L++F + ++ +S ++ +
Sbjct: 81 KYNALPAVCGRVCPQESQCEGKCVLGIKGE-PLAIGQLERFIADFARNNKLSSLKKSEKI 139
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+CA L+++GY +TI+E
Sbjct: 140 LE----KVAVIGSGPAGLTCAGELAKLGY-RVTIFE 170
>gi|153940715|ref|YP_001392097.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium botulinum F str. Langeland]
gi|152936611|gb|ABS42109.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Clostridium botulinum F str. Langeland]
Length = 438
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP + FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTNPGKFIRSLRFRNFNGAVATIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ + + GI + A + K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGRLQRYLADYEQSTGIKILEAVQATKE----KVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY +T++E
Sbjct: 135 PSGLAAAAQLALEGY-KVTVFE 155
>gi|148380779|ref|YP_001255320.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium botulinum
A str. ATCC 3502]
gi|153931157|ref|YP_001385064.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium botulinum A str. ATCC 19397]
gi|153935695|ref|YP_001388533.1| pyridine nucleotide-disulfide oxidoreductase [Clostridium botulinum
A str. Hall]
gi|148290263|emb|CAL84383.1| putative Pyridine nucleotide-disulphide oxidoreductase [Clostridium
botulinum A str. ATCC 3502]
gi|152927201|gb|ABS32701.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Clostridium botulinum A str. ATCC 19397]
gi|152931609|gb|ABS37108.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Clostridium botulinum A str. Hall]
Length = 438
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP + FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTNPGKFIRSLRFRNFNGAVATIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ + + GI + V K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGRLQRYLADYEQSTGIKILEA----VQATKEKVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY +T++E
Sbjct: 135 PSGLAAAAQLALEGY-KVTVFE 155
>gi|387819086|ref|YP_005679433.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Clostridium botulinum H04402 065]
gi|322807130|emb|CBZ04704.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Clostridium botulinum H04402 065]
Length = 438
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A++EASRCL C DAPC K+CP + FI S+ +N+ GA I +N LG C VCP
Sbjct: 20 AIEEASRCLLCHDAPCTKACPAGTNPGKFIRSLRFRNFNGAVATIRENNILGGVCARVCP 79
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T C G C+ ++ PI IG LQ++ + + GI + A + K+A+IG G
Sbjct: 80 TDKYCEGACSRCGIDK-PIQIGRLQRYLADYEQSTGIKILEAVQATKE----KVAIIGSG 134
Query: 155 PASLSCATFLSRMGYDDITIYE 176
P+ L+ A L+ GY +T++E
Sbjct: 135 PSGLAAAAQLALEGY-KVTVFE 155
>gi|325298932|ref|YP_004258849.1| Glutamate synthase (NADPH) [Bacteroides salanitronis DSM 18170]
gi|324318485|gb|ADY36376.1| Glutamate synthase (NADPH) [Bacteroides salanitronis DSM 18170]
Length = 437
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 29 TLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLT 88
+ + + A+ EA RCL C + C+K CP + DI FI +S N A + I + L
Sbjct: 14 SFTTKEAIDEAKRCLNCKNPSCKKGCPIENDIPGFIHQLSMGNMGDAMRIINEKSNLPAI 73
Query: 89 CGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKI 148
CG VCP C G C LYA +G I IG L++F + +M + + + P K+
Sbjct: 74 CGRVCPHEKQCQGHCVLYAKGKG-IQIGKLERFIADFDTEMSLIREKLPQKT----RGKV 128
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A+IG GPA L+ A L+R G+ +TI+E
Sbjct: 129 AVIGSGPAGLTVAGDLARQGF-SVTIFE 155
>gi|317056664|ref|YP_004105131.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus albus 7]
gi|315448933|gb|ADU22497.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus albus 7]
Length = 464
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
NFD++ E+ A++EA RCL C + PC CP + I FI ++ + A I
Sbjct: 21 KNFDEVTLGYSLEK-AVREAMRCLNCKNKPCMSGCPVGVRIPEFIAKVAEGDLASAYSII 79
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ N L CG VCP + C G C + + P+ IG L++F + +D + P+
Sbjct: 80 KTTNSLPAVCGRVCPQENQCEGKC-VRGIKGEPVAIGRLERFVADYMRD------KEPEI 132
Query: 140 KVDFPDT-KIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ P+ K+A++G GP+ L+ A L+++GY ++T++E
Sbjct: 133 ELPEPNGHKVAVVGAGPSGLTAAGDLAKLGY-EVTVFE 169
>gi|282879622|ref|ZP_06288353.1| glutamate synthase (NADPH), homotetrameric [Prevotella timonensis
CRIS 5C-B1]
gi|281306570|gb|EFA98599.1| glutamate synthase (NADPH), homotetrameric [Prevotella timonensis
CRIS 5C-B1]
Length = 783
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ A+ EA RCL CA C + CP I+I SFI +I + AAK + S + L C
Sbjct: 350 LTKEMAMTEAKRCLDCAKPTCVEGCPVSINIPSFIKNIERGQFLAAAKVLKSTSALPAVC 409
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C +E + IG L++FA + ++ G+S + PD + K+A
Sbjct: 410 GRVCPQEKQCESRCIHLKMKEPAVAIGHLERFAADYERESGMSSL--PDLQ-PANGIKVA 466
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY ++ ++E
Sbjct: 467 VIGSGPAGLSFAGDMAKYGY-EVHVFE 492
>gi|429739366|ref|ZP_19273123.1| glutamate synthase [Prevotella saccharolytica F0055]
gi|429157018|gb|EKX99626.1| glutamate synthase [Prevotella saccharolytica F0055]
Length = 786
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ AL EA RCL CA C + CP I+I SFI +I + AAK + + + L C
Sbjct: 350 LTKALALTEAKRCLDCAKPTCMEGCPVSINIPSFIKNIERGQFLAAAKVLKNTSALPAVC 409
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG---ISQIRPPDAKVDFPDT 146
G VCP C C E + IG L++FA + ++ G I Q+ P +
Sbjct: 410 GRVCPQEKQCESQCIHLKMNEPAVAIGYLERFAADYERESGNISIPQLAPANG------I 463
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYE 176
KIA++G GPA LS A +++ GY ++T++E
Sbjct: 464 KIAVVGSGPAGLSFAGDMAKKGY-EVTVFE 492
>gi|299141294|ref|ZP_07034431.1| glutamate synthase (NADPH), homotetrameric [Prevotella oris C735]
gi|298577254|gb|EFI49123.1| glutamate synthase (NADPH), homotetrameric [Prevotella oris C735]
Length = 459
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Query: 15 SCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYG 74
S +N+F + S R A+ EA +CL+C C+K CP + +I SFI ++S N
Sbjct: 10 SVEEINSFQAVDEG-FSMREAIAEAKKCLQCKIPQCRKGCPIENEIPSFIHALSMGNMGD 68
Query: 75 AAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI 134
A I + L CG VCP C G C + + PI IG L+QF + M +++
Sbjct: 69 AMHIINEKSNLPAICGRVCPHEKQCQGHC-VMNKKGTPIQIGKLEQFIADFDTKMNLTRE 127
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
R P KIA+IG GPA L+ A L+R G+ +TIYE
Sbjct: 128 RLPQKD----RGKIAVIGSGPAGLTVAGDLARKGF-SVTIYE 164
>gi|452944257|ref|YP_007500422.1| glutamate synthase (NADPH), homotetrameric [Hydrogenobaculum sp.
HO]
gi|452882675|gb|AGG15379.1| glutamate synthase (NADPH), homotetrameric [Hydrogenobaculum sp.
HO]
Length = 465
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 35 ALKEASRCLKCADAP--CQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMV 92
A+ EA RC+ C DA C K CP +DI FI+ I+ N A K I + CG V
Sbjct: 36 AIDEARRCILCKDADKRCIKGCPINVDIPGFISKIAEGNILEAYKIITQTDIFPSICGRV 95
Query: 93 CPTSDLCMGGCNLY------AAEEG-PINIGGLQQFATEVFKDMGISQIRPPDAKVDFPD 145
CP C G C LY +G P+NIG L++F + + IS I P +
Sbjct: 96 CPQERQCEGACILYFDTVRNKRNKGLPVNIGALEKFVGDFVR---ISGIEPSVEIEEKKG 152
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A++G GPASL CA L+R G D+ +YE
Sbjct: 153 YKVAIVGSGPASLGCAYELARRGV-DVEVYE 182
>gi|240144232|ref|ZP_04742833.1| glutamate synthase, homotetrameric [Roseburia intestinalis L1-82]
gi|257203753|gb|EEV02038.1| glutamate synthase, homotetrameric [Roseburia intestinalis L1-82]
gi|291538653|emb|CBL11764.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Roseburia
intestinalis XB6B4]
Length = 461
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCL C +A C K CP I+I +FI + N+ A I + L CG VCP C
Sbjct: 39 RCLNCKNAQCMKGCPVSINIPAFIAQVKEGNFEEAYHIISQSSALPAVCGRVCPQESQCE 98
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSC 160
G C + + P+ IG L++F + ++ + I+P A+ K+A+IG GPA L+C
Sbjct: 99 GKC-IRGIKGEPVAIGKLERFVADWARE---NDIKPKKAE-KLNGHKVAVIGSGPAGLTC 153
Query: 161 ATFLSRMGYDDITIYE 176
A L+++GY D+TI+E
Sbjct: 154 AGDLAKLGY-DVTIFE 168
>gi|298372667|ref|ZP_06982657.1| glutamate synthase (NADPH), homotetrameric [Bacteroidetes oral
taxon 274 str. F0058]
gi|298275571|gb|EFI17122.1| glutamate synthase (NADPH), homotetrameric [Bacteroidetes oral
taxon 274 str. F0058]
Length = 496
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 21 NFDDI-KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
N++++ + TL+E A++EA RCL C + C + CP IDI SFI I AAK +
Sbjct: 51 NYEEVNRGLTLTE--AMQEAKRCLDCPNPGCVQGCPVGIDIPSFIKRIEVGQILDAAKVL 108
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDA 139
+ L CG VCP C C ++ P+ IG L++FA + ++ G QI P+
Sbjct: 109 KETSALPAVCGRVCPQEKQCEALCIHKKMKKEPVAIGYLERFAADFERESG--QISVPEV 166
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K KIA+ G GPA LS A + + GY D+T++E
Sbjct: 167 K-QRNGIKIAVAGSGPAGLSFAGDMVKYGY-DVTVFE 201
>gi|157363285|ref|YP_001470052.1| putative oxidoreductase [Thermotoga lettingae TMO]
gi|157313889|gb|ABV32988.1| glutamate synthase (NADPH), homotetrameric [Thermotoga lettingae
TMO]
Length = 471
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
++NF ++ SER A++EA RCL+C PC CP IDI FI I +Y A K
Sbjct: 21 IHNFFEVA-LGYSEREAMEEAKRCLQCVHHPCVSGCPVGIDIPGFIKKIKENRFYEAVKI 79
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGC---NLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
+ N L CG VCP C C + +E P+ IG L++F + +
Sbjct: 80 LKYYNNLPAVCGRVCPQETQCEAKCVVGKIPGSE--PVAIGRLERFVAD------WEAVN 131
Query: 136 PPDAKVDFPDT---KIALIGCGPASLSCATFLSRMGY 169
D +++ P+ K+A+IG GPA L+ A L++ GY
Sbjct: 132 VKDNQIELPENKNKKVAVIGSGPAGLTAAADLAKQGY 168
>gi|295105061|emb|CBL02605.1| sulfide dehydrogenase (flavoprotein) subunit SudA [Faecalibacterium
prausnitzii SL3/3]
Length = 464
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ +E A+ EA RC+ C + PCQ CP IDI FI ++ ++ A + I
Sbjct: 23 NFKEVALGYTAEM-AVNEAKRCIGCKNKPCQSGCPVGIDIPEFIAHVAEGDFEAAYQVIN 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C E P+ IG L++F + ++ +
Sbjct: 82 RSSSLPAVCGRVCPQESQCEGKCTRGIKNE-PVAIGRLERFVADWHRE----NVHTAPVV 136
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+ A L+++GY +T+YE
Sbjct: 137 PEWNGHKVAIIGAGPAGLTAAGDLAKLGY-KVTVYE 171
>gi|404372005|ref|ZP_10977306.1| glutamate synthase (NADPH), homotetrameric [Clostridium sp.
7_2_43FAA]
gi|404301286|gb|EEH97060.2| glutamate synthase (NADPH), homotetrameric [Clostridium sp.
7_2_43FAA]
Length = 468
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ + E A++EA+RCL C + C CP I+I FI+ + + + AAK +
Sbjct: 29 NFEEVCLGYIDEE-AIQEANRCLTCKNPKCVDGCPVSINIPGFISYMKNGEFEKAAKEVA 87
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C L E P++IG L++F + + + + K
Sbjct: 88 KYSALPAVCGRVCPQESQCEGKCVLGIKGE-PVSIGKLERFIADWSRKHNVELADREEDK 146
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K+A+IG GPA L+CA L++ GY D+TI+E
Sbjct: 147 ----NKKVAVIGSGPAGLTCAGDLAKKGY-DVTIFE 177
>gi|187250586|ref|YP_001875068.1| NADPH-dependent glutamate synthase [Elusimicrobium minutum Pei191]
gi|186970746|gb|ACC97731.1| NADPH-dependent glutamate synthase [Elusimicrobium minutum Pei191]
Length = 465
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
V NFD + L+ + A EA RCL C +A C +CP + I FI+ + + GAA
Sbjct: 20 VKNFDPVVKG-LTAQTAKAEAQRCLNCKNAKCSAACPVNVKIPEFISLVLKDDMGGAASK 78
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
I + L CG VCP + C G C L E P+ +G L+++ + ++ G+ + P
Sbjct: 79 IMETSLLPAICGRVCPQENHCEGACILNGRFE-PVAVGLLERYVADTAREQGVLKAPEPS 137
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
A + ++A +G GP+SLS A L R G+ ++ ++E
Sbjct: 138 A---WTGKRVACVGSGPSSLSAAAELRRAGH-EVVVFE 171
>gi|444360608|ref|ZP_21161801.1| putative glutamate synthase subunit beta, partial [Burkholderia
cenocepacia BC7]
gi|443599763|gb|ELT68017.1| putative glutamate synthase subunit beta, partial [Burkholderia
cenocepacia BC7]
Length = 142
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 13 FTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+S L F DI L A ASRC C DAPC +CPTQIDI SFI I + N
Sbjct: 14 LSSTQLSCEFADIA-PLLDPTAAAAAASRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNL 72
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
GAA I S NPLG C VCPT LC G C + P+ IG LQ+ AT+ G
Sbjct: 73 KGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMQTGAV 132
Query: 133 QIR 135
Q R
Sbjct: 133 QFR 135
>gi|28212005|ref|NP_782949.1| oxidoreductase [Clostridium tetani E88]
gi|28204448|gb|AAO36886.1| glutamate synthase (NADPH) small chain [Clostridium tetani E88]
Length = 474
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 10 INVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISH 69
I V + + NF ++ +E A+KEASRCL C + C +CP I+I FI + +
Sbjct: 19 IKVQDAKKRIKNFKEV-CLGYTEEEAIKEASRCLNCKNPICVPNCPVAINIPKFIQHVKN 77
Query: 70 KNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDM 129
+ + AAK I + L CG VCP C G C L E PI IG L++F + ++
Sbjct: 78 REFEEAAKVINEASSLPAICGRVCPQETQCEGKCVLGVKGE-PIAIGKLERFVGDWSREN 136
Query: 130 GISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K D KIA+IG GPA L+CA L+++GY ++TI+E
Sbjct: 137 NVDL----SFKGKKKDKKIAVIGAGPAGLTCAGDLAKLGY-NVTIFE 178
>gi|325679270|ref|ZP_08158857.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus albus 8]
gi|324109056|gb|EGC03285.1| glutamate synthase (NADPH), homotetrameric [Ruminococcus albus 8]
Length = 464
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF+++ E+ A++EA RCL C PC CP + I FI ++ + A I
Sbjct: 22 NFEEVTLGYSLEK-AVREARRCLNCKARPCMNGCPVGVRIPEFIEKVAGGDLEAAYGIIK 80
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ N L CG VCP + C G C + + P+ IG L++F + +D + P+ K
Sbjct: 81 TTNSLPAVCGRVCPQENQCEGNC-VRGKKGEPVAIGRLERFVADYMRD------KEPEVK 133
Query: 141 VDFPDT-KIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ P+ K+A++G GP+ L+ A L++ GY ++T++E
Sbjct: 134 IPAPNGHKVAVVGAGPSGLTAAGDLAKQGY-EVTVFE 169
>gi|393781348|ref|ZP_10369548.1| glutamate synthase (NADPH), homotetrameric [Bacteroides salyersiae
CL02T12C01]
gi|392676932|gb|EIY70353.1| glutamate synthase (NADPH), homotetrameric [Bacteroides salyersiae
CL02T12C01]
Length = 762
Score = 93.2 bits (230), Expect = 7e-17, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
L++ A+ EA RCL CA+ C CP IDI FI +I + AAK + + L C
Sbjct: 330 LTKEQAVMEAKRCLDCANPGCMSGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIA 149
G VCP C C + + IG L++FA + ++ G QI P+ + K+A
Sbjct: 390 GRVCPQEKQCESKCIHLKMGKEAVAIGHLERFAADYERESG--QISVPEI-AEKNGIKVA 446
Query: 150 LIGCGPASLSCATFLSRMGYDDITIYE 176
+IG GPA LS A +++ GY D+T++E
Sbjct: 447 VIGSGPAGLSFAGDMAKYGY-DVTVFE 472
>gi|168334198|ref|ZP_02692401.1| glutamate synthase (NADPH), homotetrameric [Epulopiscium sp. 'N.t.
morphotype B']
Length = 461
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 24 DIKHTTLSE-------RGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
DI++ +E + AL+EA RCL C PC K CP + I FI++I + A
Sbjct: 17 DIRNKNFAEVTLGYTDKDALEEADRCLNCKHKPCMKGCPVNVQIPEFISAIKAGEFKKAN 76
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
I + L CG VCP C C + + P+ IG L++FA + + + +
Sbjct: 77 DIIKETSSLPAVCGRVCPQESQCEKYC-VRGIKNEPVGIGRLERFAADWAMENFAEKSQK 135
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P A K+A++G GPA L+CA L+ MGY D+TI+E
Sbjct: 136 PAAN----GHKVAVVGAGPAGLTCAGDLALMGY-DVTIFE 170
>gi|313205270|ref|YP_004043927.1| glutamate synthase (nadph), homotetrameric [Paludibacter
propionicigenes WB4]
gi|312444586|gb|ADQ80942.1| glutamate synthase (NADPH), homotetrameric [Paludibacter
propionicigenes WB4]
Length = 486
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Query: 30 LSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
LS A++EA RCL CA+ C + CP IDI F+ +I ++ AA+ + + L C
Sbjct: 52 LSAEQAMQEAKRCLDCANPSCMQGCPVGIDIPRFVKNIERGDFQEAARVLKETSALPAVC 111
Query: 90 GMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT-KI 148
G VCP C G C ++ + IG L++FA + ++ G I P KV P+ KI
Sbjct: 112 GRVCPQEKQCEGQCIHLKMKKESVAIGHLERFAADYERESG--NISVP--KVAEPNNIKI 167
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYE 176
A +G GPA L+ A ++++GY ++ ++E
Sbjct: 168 AAVGSGPAGLAFAGDMAKLGY-EVVVFE 194
>gi|188996482|ref|YP_001930733.1| glutamate synthase (NADPH), homotetrameric [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931549|gb|ACD66179.1| glutamate synthase (NADPH), homotetrameric [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 483
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 35 ALKEASRCLKCADAPCQK-----SCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTC 89
A EA RC+ C PCQ+ CP DI ++ I + N A + + + NP C
Sbjct: 40 AKDEADRCILCKKPPCQEHQGKYGCPVYGDINLWMEQIQNNNLIEAFRILRAKNPFSSIC 99
Query: 90 GMVCPTSDLCMGGCNLYAAEEG-PINIGGLQQFATEVFKDMGISQ---IRPPDAKVDFPD 145
G VCP LC C L + G P+NIGGL++F + + GI+ PP K
Sbjct: 100 GRVCPQDRLCESTCVLTFKDNGQPVNIGGLERFVGDSIRMSGINWEDLKEPPTGK----- 154
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IG GPA LS A FL++ G+ +T++E
Sbjct: 155 -KVAVIGAGPAGLSAAYFLAKKGH-SVTVFE 183
>gi|160944148|ref|ZP_02091378.1| hypothetical protein FAEPRAM212_01650 [Faecalibacterium prausnitzii
M21/2]
gi|158444824|gb|EDP21828.1| glutamate synthase (NADPH), homotetrameric [Faecalibacterium
prausnitzii M21/2]
Length = 464
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF ++ +E A+ EA RC+ C + PCQ CP IDI FI ++ ++ A + I
Sbjct: 23 NFKEVALGYTAEM-AVNEAKRCIGCKNKPCQSGCPVGIDIPEFIAHVAEGDFEAAYQVIN 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
+ L CG VCP C G C E P+ IG L++F + ++ +
Sbjct: 82 RSSSLPAVCGRVCPQESQCEGKCTRGIKNE-PVAIGRLERFVADWHRE----NVHTAPVV 136
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
++ K+A+IG GPA L+ A L+++GY +T+YE
Sbjct: 137 PEWNGHKVAVIGAGPAGLTAAGDLAKLGY-KVTVYE 171
>gi|383754986|ref|YP_005433889.1| putative glutamate synthase (NADPH), homotetrameric [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381367038|dbj|BAL83866.1| putative glutamate synthase (NADPH), homotetrameric [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 467
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 14/161 (8%)
Query: 20 NNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAI 79
+NFD++ E A+ EA RCL C C+K CP +DI FI I +++ GA I
Sbjct: 20 HNFDEVA-LGYDEETAVAEAERCLHCKVPQCRKGCPVSVDIPEFIGKIKERDFDGAIAKI 78
Query: 80 FSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPP 137
N L CG VCP + C C L E + IG L++F ++ K+ +++P
Sbjct: 79 KESNALPAVCGRVCPQENQCEKYCVLAKKGES-VGIGRLERFVADRQLAKN---EEVKP- 133
Query: 138 DAKVDFPD--TKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+++ D K+A+IG GP+ LSCA L++ GY +T++E
Sbjct: 134 ---IEYADDAQKVAVIGSGPSGLSCAGDLAKKGY-KVTVFE 170
>gi|255525705|ref|ZP_05392637.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
gi|296184810|ref|ZP_06853221.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
gi|255510607|gb|EET86915.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
gi|296050592|gb|EFG90015.1| glutamate synthase (NADPH), homotetrameric [Clostridium
carboxidivorans P7]
Length = 462
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C C CP I+I FI + ++ + AAK I + L CG VCP
Sbjct: 35 AVKEASRCLHCKKPMCVSKCPVSINIPEFIEHVKNEEFEEAAKTIAKSSALPAVCGRVCP 94
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKD--MGISQIRPPDAKVDFPDTKIALIG 152
C G C L E + IG L++F + ++ + +S+ + K K+A+IG
Sbjct: 95 QESQCEGKCVLGIKGEA-VAIGKLERFVADYSRENNVDLSEKETSNGK------KVAVIG 147
Query: 153 CGPASLSCATFLSRMGYDDITIYE 176
GP+ L+CA L+++GY D+TI+E
Sbjct: 148 SGPSGLTCAGDLAKLGY-DVTIFE 170
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,728,989,780
Number of Sequences: 23463169
Number of extensions: 147870873
Number of successful extensions: 355932
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3159
Number of HSP's successfully gapped in prelim test: 3007
Number of HSP's that attempted gapping in prelim test: 344033
Number of HSP's gapped (non-prelim): 9032
length of query: 240
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 102
effective length of database: 9,121,278,045
effective search space: 930370360590
effective search space used: 930370360590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)