Your job contains 1 sequence.
>psy16201
MPEQSSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDI
KSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQ
FATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY
DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16201
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-2459 - symbol:dpydb "dihydropyrimidi... 714 3.9e-87 2
UNIPROTKB|Q28007 - symbol:DPYD "Dihydropyrimidine dehydro... 698 3.1e-83 2
UNIPROTKB|Q12882 - symbol:DPYD "Dihydropyrimidine dehydro... 695 7.1e-83 2
UNIPROTKB|F1N549 - symbol:DPYD "Dihydropyrimidine dehydro... 694 9.5e-83 2
UNIPROTKB|E2RSQ9 - symbol:DPYD "Uncharacterized protein" ... 692 1.8e-82 2
UNIPROTKB|Q5R895 - symbol:DPYD "Dihydropyrimidine dehydro... 690 2.2e-82 2
MGI|MGI:2139667 - symbol:Dpyd "dihydropyrimidine dehydrog... 687 5.0e-82 2
RGD|621218 - symbol:Dpyd "dihydropyrimidine dehydrogenase... 687 5.0e-82 2
UNIPROTKB|O89000 - symbol:Dpyd "Dihydropyrimidine dehydro... 687 5.0e-82 2
FB|FBgn0086450 - symbol:su(r) "suppressor of rudimentary"... 688 5.6e-82 2
UNIPROTKB|Q28943 - symbol:DPYD "Dihydropyrimidine dehydro... 675 1.3e-80 2
DICTYBASE|DDB_G0267966 - symbol:pyd1 "dihydropyrimidine d... 648 1.1e-78 2
WB|WBGene00016103 - symbol:dpyd-1 species:6239 "Caenorhab... 642 3.0e-76 2
UNIPROTKB|Q18164 - symbol:dpyd-1 "Dihydropyrimidine dehyd... 642 3.0e-76 2
UNIPROTKB|E1C4J1 - symbol:DPYD "Uncharacterized protein" ... 593 1.8e-72 2
UNIPROTKB|E1BRA0 - symbol:DPYD "Uncharacterized protein" ... 593 1.8e-72 2
UNIPROTKB|F1M412 - symbol:F1M412 "Uncharacterized protein... 586 6.1e-71 2
UNIPROTKB|F1S550 - symbol:DPYD "Dihydropyrimidine dehydro... 581 2.2e-70 2
ZFIN|ZDB-GENE-061013-727 - symbol:dpyda "dihydropyrimidin... 698 8.0e-69 1
UNIPROTKB|B4DML1 - symbol:DPYD "Dihydropyrimidine dehydro... 534 1.9e-51 1
UNIPROTKB|P76440 - symbol:preT "NADH-dependent dihydropyr... 325 2.7e-29 1
UNIPROTKB|Q8Z5A6 - symbol:preT "NAD-dependent dihydropyri... 318 1.5e-28 1
UNIPROTKB|Q8ZNL8 - symbol:preT "NAD-dependent dihydropyri... 318 1.5e-28 1
TIGR_CMR|SPO_1776 - symbol:SPO_1776 "pyridine nucleotide-... 290 2.1e-25 1
TIGR_CMR|CHY_1991 - symbol:CHY_1991 "glutamate synthase (... 244 4.1e-20 1
TIGR_CMR|GSU_3057 - symbol:GSU_3057 "glutamate synthase (... 243 5.5e-20 1
TIGR_CMR|DET_0038 - symbol:DET_0038 "glutamate synthase (... 228 2.4e-18 1
UNIPROTKB|P37127 - symbol:aegA species:83333 "Escherichia... 214 1.7e-16 1
UNIPROTKB|Q4KJI5 - symbol:gltD "Glutamate synthase, small... 210 2.3e-16 1
UNIPROTKB|Q46820 - symbol:ygfT "fused predicted oxidoredu... 212 2.7e-16 1
UNIPROTKB|P09832 - symbol:gltD "glutamate synthase, small... 207 4.9e-16 1
TIGR_CMR|SO_1324 - symbol:SO_1324 "glutamate synthase, sm... 206 6.2e-16 1
UNIPROTKB|Q9KPJ0 - symbol:VC_2377 "Glutamate synthase, sm... 206 6.3e-16 1
TIGR_CMR|VC_2377 - symbol:VC_2377 "glutamate synthase, sm... 206 6.3e-16 1
TIGR_CMR|CPS_4502 - symbol:CPS_4502 "glutamate synthase, ... 201 2.2e-15 1
UNIPROTKB|Q0C617 - symbol:gltD "Glutamate synthase, small... 194 1.3e-14 1
TIGR_CMR|SPO_3770 - symbol:SPO_3770 "glutamate synthase, ... 188 5.9e-14 1
UNIPROTKB|Q74FU5 - symbol:sfrB "NADPH oxidoreductase, bet... 168 1.9e-10 1
TIGR_CMR|GSU_0510 - symbol:GSU_0510 "Fe(III) reductase, b... 168 1.9e-10 1
TIGR_CMR|SO_0988 - symbol:SO_0988 "formate dehydrogenase,... 169 3.3e-10 1
SGD|S000002330 - symbol:GLT1 "NAD(+)-dependent glutamate ... 161 7.8e-09 1
TIGR_CMR|DET_0123 - symbol:DET_0123 "pyridine nucleotide-... 149 6.0e-08 1
UNIPROTKB|Q46811 - symbol:ygfK "predicted oxidoreductase,... 144 4.5e-07 1
ASPGD|ASPL0000027159 - symbol:gltA species:162425 "Emeric... 145 7.9e-07 1
UNIPROTKB|Q9KPJ3 - symbol:VC_2374 "Glutamate synthase, sm... 137 1.1e-06 1
TIGR_CMR|VC_2374 - symbol:VC_2374 "glutamate synthase, sm... 137 1.1e-06 1
TAIR|locus:2178461 - symbol:GLT1 "NADH-dependent glutamat... 142 1.9e-06 1
TIGR_CMR|DET_0866 - symbol:DET_0866 "hydrogenase subunit,... 134 2.3e-06 1
POMBASE|SPAPB1E7.07 - symbol:glt1 "glutamate synthase Glt... 134 1.6e-05 1
UNIPROTKB|P96219 - symbol:gltD "Glutamate synthase [NADPH... 127 1.6e-05 1
CGD|CAL0000516 - symbol:GLT1 species:5476 "Candida albica... 132 2.7e-05 1
UNIPROTKB|Q0JKD0 - symbol:LOC_Os01g48960 "Glutamate synth... 132 2.8e-05 1
TIGR_CMR|CPS_0762 - symbol:CPS_0762 "glutamate synthase, ... 122 6.4e-05 1
FB|FBgn0036663 - symbol:CG9674 species:7227 "Drosophila m... 125 0.00017 1
WB|WBGene00012326 - symbol:W07E11.1 species:6239 "Caenorh... 119 0.00085 1
>ZFIN|ZDB-GENE-040426-2459 [details] [associations]
symbol:dpydb "dihydropyrimidine dehydrogenase b"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0017113 "dihydropyrimidine dehydrogenase (NADP+)
activity" evidence=IEA;ISS] [GO:0006212 "uracil catabolic process"
evidence=ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF01180 Pfam:PF07992 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 ZFIN:ZDB-GENE-040426-2459 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 GO:GO:0009055 GO:GO:0046872
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 HOVERGEN:HBG004351 KO:K00207
OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:BC066602 IPI:IPI00502639
RefSeq:NP_998058.1 UniGene:Dr.161770 HSSP:Q28943
ProteinModelPortal:Q6NYG8 SMR:Q6NYG8 STRING:Q6NYG8 PRIDE:Q6NYG8
GeneID:405829 KEGG:dre:405829 CTD:405829 eggNOG:COG0167
InParanoid:Q6NYG8 NextBio:20817792 ArrayExpress:Q6NYG8
Uniprot:Q6NYG8
Length = 1022
Score = 714 (256.4 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 136/172 (79%), Positives = 151/172 (87%)
Query: 15 SC-SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
SC +L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+KNYY
Sbjct: 51 SCVNLENNFDDIKHTTLSERGALREALRCLKCADAPCQKSCPTNLDIKSFITSISNKNYY 110
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GAAKAI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFATEVF MGI Q
Sbjct: 111 GAAKAILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATEVFSKMGIPQ 170
Query: 134 IRPPDAKV--DFPD---TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IR P+ + P T+IALIGCGPAS+SCA+FL+R+GYD+ITI+EK Y
Sbjct: 171 IRNPELPTADNMPKSFHTRIALIGCGPASISCASFLARLGYDNITIFEKQKY 222
Score = 180 (68.4 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 36/57 (63%), Positives = 44/57 (77%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS H++GP QGSFLNIELISEKTA W CK ++ + +F
Sbjct: 581 DLVTNVSPRIVRGTTSGHIFGPGQGSFLNIELISEKTAAYW-----CKSVAELKADF 632
Score = 40 (19.1 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>UNIPROTKB|Q28007 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;IDA] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0006212 "uracil
catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0050661 "NADP binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
EMBL:U20981 IPI:IPI00707298 PIR:A44626 RefSeq:NP_776466.1
UniGene:Bt.2424 ProteinModelPortal:Q28007 SMR:Q28007 STRING:Q28007
PRIDE:Q28007 GeneID:281124 KEGG:bta:281124 CTD:1806
HOGENOM:HOG000007797 HOVERGEN:HBG004351 InParanoid:Q28007 KO:K00207
OrthoDB:EOG44J2H8 NextBio:20805192 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 Uniprot:Q28007
Length = 1025
Score = 698 (250.8 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 132/175 (75%), Positives = 146/175 (83%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQ+ATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL+G GPAS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMPEAYSAKIALLGAGPASISCASFLARLGYNDITIFEKQEY 222
Score = 162 (62.1 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>UNIPROTKB|Q12882 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9606 "Homo sapiens" [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0019483 "beta-alanine biosynthetic process" evidence=IEA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IMP;IDA;TAS] [GO:0006212 "uracil catabolic process"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0042803 "protein homodimerization
activity" evidence=ISS;IDA] [GO:0006145 "purine nucleobase
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS;IMP] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] [GO:0050661 "NADP binding"
evidence=ISS] [GO:0006210 "thymine catabolic process" evidence=IDA]
[GO:0006214 "thymidine catabolic process" evidence=IDA] [GO:0006206
"pyrimidine nucleobase metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0046135
"pyrimidine nucleoside catabolic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005829 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0016491 GO:GO:0051539
EMBL:CH471097 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006145 DrugBank:DB01101 GO:GO:0006222 SUPFAM:SSF46548
CTD:1806 HOVERGEN:HBG004351 KO:K00207 OrthoDB:EOG44J2H8
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 eggNOG:COG0167 EMBL:U09178 EMBL:U20938
EMBL:AB003063 EMBL:BT006740 EMBL:AK291217 EMBL:AL356457
EMBL:AC091608 EMBL:AC093576 EMBL:AC099787 EMBL:AC114878
EMBL:AC138135 EMBL:BX908805 EMBL:BC008379 EMBL:BC064027
EMBL:BC108742 EMBL:BC131777 EMBL:BC131778 EMBL:X95670 EMBL:U57655
IPI:IPI00029772 IPI:IPI00095889 PIR:A54718 RefSeq:NP_000101.2
RefSeq:NP_001153773.1 UniGene:Hs.335034 ProteinModelPortal:Q12882
SMR:Q12882 IntAct:Q12882 STRING:Q12882 PhosphoSite:Q12882
DMDM:160332325 PaxDb:Q12882 PRIDE:Q12882 DNASU:1806
Ensembl:ENST00000306031 Ensembl:ENST00000370192 GeneID:1806
KEGG:hsa:1806 UCSC:uc001drv.3 GeneCards:GC01M097543
H-InvDB:HIX0000804 HGNC:HGNC:3012 HPA:CAB033241 MIM:274270
MIM:612779 neXtProt:NX_Q12882 Orphanet:240839 Orphanet:240855
Orphanet:1675 Orphanet:240955 Orphanet:240963 PharmGKB:PA145
InParanoid:Q12882 BindingDB:Q12882 ChEMBL:CHEMBL3172 ChiTaRS:DPYD
DrugBank:DB00109 GenomeRNAi:1806 NextBio:7361 ArrayExpress:Q12882
Bgee:Q12882 CleanEx:HS_DPYD Genevestigator:Q12882
GermOnline:ENSG00000188641 GO:GO:0006210 Uniprot:Q12882
Length = 1025
Score = 695 (249.7 bits), Expect = 7.1e-83, Sum P(2) = 7.1e-83
Identities = 132/175 (75%), Positives = 144/175 (82%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 162 (62.1 bits), Expect = 7.1e-83, Sum P(2) = 7.1e-83
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>UNIPROTKB|F1N549 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 IPI:IPI00707298 UniGene:Bt.2424 GO:GO:0004158
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:DAAA02007797 EMBL:DAAA02007798 EMBL:DAAA02007799
EMBL:DAAA02007800 EMBL:DAAA02007801 EMBL:DAAA02007802
EMBL:DAAA02007803 EMBL:DAAA02007804 EMBL:DAAA02007805
EMBL:DAAA02007806 EMBL:DAAA02007807 EMBL:DAAA02007808
EMBL:DAAA02007809 ProteinModelPortal:F1N549
Ensembl:ENSBTAT00000007139 ArrayExpress:F1N549 Uniprot:F1N549
Length = 1025
Score = 694 (249.4 bits), Expect = 9.5e-83, Sum P(2) = 9.5e-83
Identities = 131/175 (74%), Positives = 145/175 (82%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQ+ATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQYATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KI L+G GPAS+SCA+FL+R+GY+DITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEKMPEAYSAKIVLLGAGPASISCASFLARLGYNDITIFEKQEY 222
Score = 162 (62.1 bits), Expect = 9.5e-83, Sum P(2) = 9.5e-83
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>UNIPROTKB|E2RSQ9 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158
TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896 OMA:PWPAVGI
EMBL:AAEX03004787 EMBL:AAEX03004786 Ensembl:ENSCAFT00000031930
Uniprot:E2RSQ9
Length = 1029
Score = 692 (248.7 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 131/173 (75%), Positives = 145/173 (83%)
Query: 14 TSCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNY 72
+ C L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNY
Sbjct: 24 SKCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNY 83
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGIS 132
YGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEVFK M I+
Sbjct: 84 YGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMNIT 143
Query: 133 QIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 144 QIRNPSLPPPEKMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 196
Score = 162 (62.1 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRI++GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 555 DIVTNVSPRIIRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 606
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE--GPINIGGLQQFAT------- 123
Y A A+F P ++C + L ++ +E G ++I + QF
Sbjct: 160 YSAKIALFGAGPASISCASFL--ARLGYSDITIFEKQEYVGGLSISEIPQFRLPYDAVNF 217
Query: 124 --EVFKDMGISQI 134
E+ KD+G+ I
Sbjct: 218 EIELMKDLGVKII 230
>UNIPROTKB|Q5R895 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9601 "Pongo abelii" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006212 "uracil catabolic process" evidence=ISS] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0046872 GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797
HOVERGEN:HBG004351 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 HSSP:Q28943
EMBL:CR859859 RefSeq:NP_001126169.1 UniGene:Pab.11422
ProteinModelPortal:Q5R895 SMR:Q5R895 PRIDE:Q5R895 GeneID:100173131
KEGG:pon:100173131 InParanoid:Q5R895 Uniprot:Q5R895
Length = 1025
Score = 690 (248.0 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
Identities = 131/175 (74%), Positives = 143/175 (81%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPT DLC+GGCNLYA EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTPDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMS 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPFLPPPEKMSEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 163 (62.4 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
Score = 40 (19.1 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>MGI|MGI:2139667 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0002058 "uracil binding" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004152 "dihydroorotate dehydrogenase
activity" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006145 "purine
nucleobase catabolic process" evidence=ISO] [GO:0006208 "pyrimidine
nucleobase catabolic process" evidence=ISO;IDA] [GO:0006210
"thymine catabolic process" evidence=ISO] [GO:0006212 "uracil
catabolic process" evidence=ISO] [GO:0006214 "thymidine catabolic
process" evidence=ISO] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=ISO] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;IDA] [GO:0019860
"uracil metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=ISO] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO;IDA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 MGI:MGI:2139667 GO:GO:0005829 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI HSSP:Q28943 eggNOG:COG0167
GO:GO:0006210 EMBL:BC039699 IPI:IPI00229705 RefSeq:NP_740748.1
UniGene:Mm.27907 ProteinModelPortal:Q8CHR6 SMR:Q8CHR6 STRING:Q8CHR6
PhosphoSite:Q8CHR6 PaxDb:Q8CHR6 PRIDE:Q8CHR6
Ensembl:ENSMUST00000039177 GeneID:99586 KEGG:mmu:99586
UCSC:uc008rdh.1 InParanoid:Q8CHR6 NextBio:354029 Bgee:Q8CHR6
Genevestigator:Q8CHR6 Uniprot:Q8CHR6
Length = 1025
Score = 687 (246.9 bits), Expect = 5.0e-82, Sum P(2) = 5.0e-82
Identities = 131/175 (74%), Positives = 146/175 (83%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N FT L +NFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFTCEKLESNFDDIKHTTLGERGALREAVRCLKCADAPCQKSCPTSLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+AAEEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHAAEEGPINIGGLQQFATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY +ITI+EK Y
Sbjct: 168 IPQIRNPSLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSNITIFEKQEY 222
Score = 163 (62.4 bits), Expect = 5.0e-82, Sum P(2) = 5.0e-82
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W +
Sbjct: 581 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYWCH 623
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
Score = 36 (17.7 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 16/73 (21%), Positives = 29/73 (39%)
Query: 73 YGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEE--GPINIGGLQQFAT------- 123
Y A A+F P ++C + L ++ +E G ++ + QF
Sbjct: 186 YSAKIALFGAGPASISCASFL--ARLGYSNITIFEKQEYVGGLSTSEIPQFRLPYDVVNF 243
Query: 124 --EVFKDMGISQI 134
E+ KD+G+ I
Sbjct: 244 EIELMKDLGVKII 256
>RGD|621218 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0002058 "uracil binding" evidence=IDA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006145 "purine nucleobase catabolic process"
evidence=ISO] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISO;IDA;TAS] [GO:0006210 "thymine catabolic process"
evidence=ISO] [GO:0006212 "uracil catabolic process"
evidence=ISO;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISO;ISS] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IDA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;ISS;IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0019860
"uracil metabolic process" evidence=IDA] [GO:0042493 "response to
drug" evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=IDA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 687 (246.9 bits), Expect = 5.0e-82, Sum P(2) = 5.0e-82
Identities = 131/175 (74%), Positives = 144/175 (82%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFICEKLENNFDDIKHTTLGERGALREAVRCLKCADAPCQKSCPTSLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+A EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHATEEGPINIGGLQQFATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRSPLLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 163 (62.4 bits), Expect = 5.0e-82, Sum P(2) = 5.0e-82
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W +
Sbjct: 581 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYWCH 623
Score = 40 (19.1 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>UNIPROTKB|O89000 [details] [associations]
symbol:Dpyd "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:10116 "Rattus norvegicus" [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 687 (246.9 bits), Expect = 5.0e-82, Sum P(2) = 5.0e-82
Identities = 131/175 (74%), Positives = 144/175 (82%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++K
Sbjct: 48 NCFICEKLENNFDDIKHTTLGERGALREAVRCLKCADAPCQKSCPTSLDIKSFITSIANK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNL+A EEGPINIGGLQQFATEVFK M
Sbjct: 108 NYYGAAKLIFSDNPLGLTCGMVCPTSDLCVGGCNLHATEEGPINIGGLQQFATEVFKAMN 167
Query: 131 ISQIR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR PP+ + KIAL G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRSPLLPPPEHMPEAYSAKIALFGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 163 (62.4 bits), Expect = 5.0e-82, Sum P(2) = 5.0e-82
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W +
Sbjct: 581 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYWCH 623
Score = 40 (19.1 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>FB|FBgn0086450 [details] [associations]
symbol:su(r) "suppressor of rudimentary" species:7227
"Drosophila melanogaster" [GO:0004159 "dihydrouracil dehydrogenase
(NAD+) activity" evidence=TAS] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;NAS] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IGI] InterPro:IPR001295 InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS00912 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006207
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
eggNOG:COG0167 EMBL:DQ027826 ProteinModelPortal:Q4TWT4 SMR:Q4TWT4
STRING:Q4TWT4 PaxDb:Q4TWT4 PRIDE:Q4TWT4 FlyBase:FBgn0086450
InParanoid:Q4TWT4 OrthoDB:EOG451C5K ArrayExpress:Q4TWT4 Bgee:Q4TWT4
Uniprot:Q4TWT4
Length = 1031
Score = 688 (247.2 bits), Expect = 5.6e-82, Sum P(2) = 5.6e-82
Identities = 127/164 (77%), Positives = 146/164 (89%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
+L N+F DIKHTTLSERGAL+EA+RCLKCADAPCQKSCPTQ+DIKSFITSI++KN+YGAA
Sbjct: 56 TLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIKSFITSIANKNFYGAA 115
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
KAIFSDNPLGLTCGMVCPTSDLC+GGCNL A+E GPINIGGLQQFATEVFK MG+ Q R
Sbjct: 116 KAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAGPINIGGLQQFATEVFKKMGVRQRRT 175
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P A+ + KIAL+G PASLSCATFL+R+GY D+TIYE+ +Y
Sbjct: 176 PQAEANPLSQKIALVGGEPASLSCATFLARLGYRDVTIYERRSY 219
Score = 162 (62.1 bits), Expect = 5.6e-82, Sum P(2) = 5.6e-82
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+GTTS + YGP+QG FLNIELISEK A W+
Sbjct: 576 DLVTNVSPRIVRGTTSGYKYGPQQGCFLNIELISEKRAEYWL 617
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 334 VIVLGAGDTAFDCATSALRCG 354
>UNIPROTKB|Q28943 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0010181 "FMN binding" evidence=IDA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IDA] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0050661 "NADP binding"
evidence=IDA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019483 "beta-alanine biosynthetic process"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0019483 GO:GO:0010181 GO:GO:0006222 DrugBank:DB00544
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 eggNOG:COG0167
EMBL:U09179 PIR:B54718 RefSeq:NP_999209.1 UniGene:Ssc.153 PDB:1GT8
PDB:1GTE PDB:1GTH PDB:1H7W PDB:1H7X PDBsum:1GT8 PDBsum:1GTE
PDBsum:1GTH PDBsum:1H7W PDBsum:1H7X ProteinModelPortal:Q28943
SMR:Q28943 STRING:Q28943 GeneID:397109 KEGG:ssc:397109
EvolutionaryTrace:Q28943 Uniprot:Q28943
Length = 1025
Score = 675 (242.7 bits), Expect = 1.3e-80, Sum P(2) = 1.3e-80
Identities = 130/175 (74%), Positives = 144/175 (82%)
Query: 11 NVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHK 70
N F L NNF DIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+K
Sbjct: 48 NCFHCEKLENNFGDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNK 107
Query: 71 NYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG 130
NYYGAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEG INIGGLQQFA+EVFK M
Sbjct: 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMN 167
Query: 131 ISQIRPP--DAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
I QIR P ++ P+ KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 168 IPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222
Score = 163 (62.4 bits), Expect = 1.3e-80, Sum P(2) = 1.3e-80
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 581 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 632
Score = 40 (19.1 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 335 VIVLGAGDTAFDCATSALRCG 355
>DICTYBASE|DDB_G0267966 [details] [associations]
symbol:pyd1 "dihydropyrimidine dehydrogenase"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=IEA;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0019483 "beta-alanine
biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 dictyBase:DDB_G0267966 Prosite:PS00198
GO:GO:0005737 GenomeReviews:CM000150_GR Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 EMBL:AAFI02000003
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 KO:K00207 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 OMA:PWPAVGI HSSP:Q28943
eggNOG:COG0167 EMBL:AF545064 RefSeq:XP_647452.1
ProteinModelPortal:Q55FT1 SMR:Q55FT1 STRING:Q55FT1
EnsemblProtists:DDB0231100 GeneID:8616259 KEGG:ddi:DDB_G0267966
ProtClustDB:CLSZ2431542 Uniprot:Q55FT1
Length = 1009
Score = 648 (233.2 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 123/170 (72%), Positives = 137/170 (80%)
Query: 16 CSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGA 75
C L N+F+D+K TTL+ERGAL E++RCLKCADAPCQK CPTQ+DIKSFI+SIS KNYYGA
Sbjct: 52 CELKNDFEDVKPTTLTERGALFESARCLKCADAPCQKGCPTQLDIKSFISSISTKNYYGA 111
Query: 76 AKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR 135
AK IFSDNPLGLTCGMVCP S LC GCNL A EEGPINIGGLQQFATEVFK M I QIR
Sbjct: 112 AKTIFSDNPLGLTCGMVCPVSSLCQYGCNLAATEEGPINIGGLQQFATEVFKKMNIPQIR 171
Query: 136 PPDAKV--DFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P P++ KIALIGCGP S+SCATFL R+GY D+TI+EK Y
Sbjct: 172 DPSLTPLSQLPESYKAKIALIGCGPTSISCATFLGRLGYTDVTIFEKEQY 221
Score = 173 (66.0 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS H +GP QG+FLNIELISEKT + W CK + + +F
Sbjct: 579 DLVTNVSPRIVRGTTSGHHFGPGQGAFLNIELISEKTCHYW-----CKAIGELKRDF 630
Score = 52 (23.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITI-YEKNTYDM 182
++ ++G G + CAT R G +T+ + + DM
Sbjct: 333 RVIVLGAGDTAFDCATSAFRCGASRVTVCFRRGFSDM 369
>WB|WBGene00016103 [details] [associations]
symbol:dpyd-1 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158
GO:GO:0017113 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
EMBL:FO080672 PIR:T15616 RefSeq:NP_508927.2
ProteinModelPortal:Q18164 DIP:DIP-25332N MINT:MINT-1123364
STRING:Q18164 PaxDb:Q18164 EnsemblMetazoa:C25F6.3 GeneID:180818
KEGG:cel:CELE_C25F6.3 CTD:180818 WormBase:C25F6.3
GeneTree:ENSGT00500000044896 InParanoid:Q18164 OMA:PWPAVGI
NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 642 (231.1 bits), Expect = 3.0e-76, Sum P(2) = 3.0e-76
Identities = 119/166 (71%), Positives = 140/166 (84%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTLSERGALKEA RCLKCADAPCQKSCPTQ+D+KSFITSIS+KNYYGAA+
Sbjct: 70 LKNDFRDIKHTTLSERGALKEAMRCLKCADAPCQKSCPTQLDVKSFITSISNKNYYGAAR 129
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A +VFK M + QI
Sbjct: 130 QILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVRQIVSK 189
Query: 138 DAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + + ++ALIGCGPAS+SCA+FL+R+GY DITIYEK Y
Sbjct: 190 EVRENRNASHKEQVALIGCGPASISCASFLARLGYTDITIYEKRAY 235
Score = 159 (61.0 bits), Expect = 3.0e-76, Sum P(2) = 3.0e-76
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS LYGP QGSF+NIELISEK+ W+
Sbjct: 595 DLVTNVSPRIVRGSTSGPLYGPNQGSFMNIELISEKSCEYWL 636
Score = 53 (23.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITI 174
++ ++G G ++ CAT R G +TI
Sbjct: 348 RVVVLGAGDTAMDCATSALRCGASRVTI 375
>UNIPROTKB|Q18164 [details] [associations]
symbol:dpyd-1 "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:6239 "Caenorhabditis elegans" [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
[GO:0006214 "thymidine catabolic process" evidence=ISS] [GO:0006212
"uracil catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0009055 GO:GO:0046872 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:FO080672
PIR:T15616 RefSeq:NP_508927.2 ProteinModelPortal:Q18164
DIP:DIP-25332N MINT:MINT-1123364 STRING:Q18164 PaxDb:Q18164
EnsemblMetazoa:C25F6.3 GeneID:180818 KEGG:cel:CELE_C25F6.3
CTD:180818 WormBase:C25F6.3 GeneTree:ENSGT00500000044896
InParanoid:Q18164 OMA:PWPAVGI NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 642 (231.1 bits), Expect = 3.0e-76, Sum P(2) = 3.0e-76
Identities = 119/166 (71%), Positives = 140/166 (84%)
Query: 18 LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAK 77
L N+F DIKHTTLSERGALKEA RCLKCADAPCQKSCPTQ+D+KSFITSIS+KNYYGAA+
Sbjct: 70 LKNDFRDIKHTTLSERGALKEAMRCLKCADAPCQKSCPTQLDVKSFITSISNKNYYGAAR 129
Query: 78 AIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP 137
I SDNPLGLTCGM+CPTSDLC+G CNL A+EEG INIGGLQQ+A +VFK M + QI
Sbjct: 130 QILSDNPLGLTCGMICPTSDLCVGSCNLQASEEGAINIGGLQQYACDVFKQMNVRQIVSK 189
Query: 138 DAKVDFPDT---KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ + + + ++ALIGCGPAS+SCA+FL+R+GY DITIYEK Y
Sbjct: 190 EVRENRNASHKEQVALIGCGPASISCASFLARLGYTDITIYEKRAY 235
Score = 159 (61.0 bits), Expect = 3.0e-76, Sum P(2) = 3.0e-76
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWV 222
D+VTNVSPRIV+G+TS LYGP QGSF+NIELISEK+ W+
Sbjct: 595 DLVTNVSPRIVRGSTSGPLYGPNQGSFMNIELISEKSCEYWL 636
Score = 53 (23.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITI 174
++ ++G G ++ CAT R G +TI
Sbjct: 348 RVVVLGAGDTAMDCATSALRCGASRVTI 375
>UNIPROTKB|E1C4J1 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
EMBL:AADN02012893 EMBL:AADN02012894 EMBL:AADN02012895
IPI:IPI00597341 Ensembl:ENSGALT00000008842 ArrayExpress:E1C4J1
Uniprot:E1C4J1
Length = 950
Score = 593 (213.8 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 112/145 (77%), Positives = 124/145 (85%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+
Sbjct: 2 RCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCV 61
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD--AKVDFPDT---KIALIGCGP 155
GGCNLYA EEGPINIGGLQQFATEVFK M I QIR P + D P+ KIAL+G GP
Sbjct: 62 GGCNLYATEEGPINIGGLQQFATEVFKAMNIPQIRNPSLPSPEDMPEAYHVKIALLGAGP 121
Query: 156 ASLSCATFLSRMGYDDITIYEKNTY 180
ASLSCA+FL+R+GY +ITI+EK Y
Sbjct: 122 ASLSCASFLARLGYSNITIFEKQEY 146
Score = 170 (64.9 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 35/57 (61%), Positives = 43/57 (75%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+G TS +YGP QGSFLNIELISEKTA W CK ++ +++F
Sbjct: 506 DIVTNVSPRIVRGVTSGPIYGPGQGSFLNIELISEKTAAYW-----CKSITELKSDF 557
Score = 37 (18.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 121 FATEVFKDMGISQIRPPDAKVD 142
F E+ KD+G+ I VD
Sbjct: 167 FEAELMKDLGVKIIYSKGLAVD 188
>UNIPROTKB|E1BRA0 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006145 "purine nucleobase catabolic process"
evidence=IEA] [GO:0006210 "thymine catabolic process" evidence=IEA]
[GO:0006212 "uracil catabolic process" evidence=IEA] [GO:0006214
"thymidine catabolic process" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005829
Gene3D:3.20.20.70 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
OMA:PWPAVGI GO:GO:0006210 EMBL:AADN02012893 EMBL:AADN02012894
EMBL:AADN02012895 IPI:IPI00822678 ProteinModelPortal:E1BRA0
Ensembl:ENSGALT00000039100 ArrayExpress:E1BRA0 Uniprot:E1BRA0
Length = 951
Score = 593 (213.8 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 112/145 (77%), Positives = 124/145 (85%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+
Sbjct: 2 RCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCV 61
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD--AKVDFPDT---KIALIGCGP 155
GGCNLYA EEGPINIGGLQQFATEVFK M I QIR P + D P+ KIAL+G GP
Sbjct: 62 GGCNLYATEEGPINIGGLQQFATEVFKAMNIPQIRNPSLPSPEDMPEAYHVKIALLGAGP 121
Query: 156 ASLSCATFLSRMGYDDITIYEKNTY 180
ASLSCA+FL+R+GY +ITI+EK Y
Sbjct: 122 ASLSCASFLARLGYSNITIFEKQEY 146
Score = 170 (64.9 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 35/57 (61%), Positives = 43/57 (75%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+G TS +YGP QGSFLNIELISEKTA W CK ++ +++F
Sbjct: 507 DIVTNVSPRIVRGVTSGPIYGPGQGSFLNIELISEKTAAYW-----CKSITELKSDF 558
Score = 37 (18.1 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 121 FATEVFKDMGISQIRPPDAKVD 142
F E+ KD+G+ I VD
Sbjct: 167 FEAELMKDLGVKIIYSKGLAVD 188
>UNIPROTKB|F1M412 [details] [associations]
symbol:F1M412 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
IPI:IPI00209289 Ensembl:ENSRNOT00000023229 ArrayExpress:F1M412
Uniprot:F1M412
Length = 950
Score = 586 (211.3 bits), Expect = 6.1e-71, Sum P(2) = 6.1e-71
Identities = 110/145 (75%), Positives = 122/145 (84%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCLKCADAPCQKSCPT +DIKSFITSI++KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+
Sbjct: 1 RCLKCADAPCQKSCPTSLDIKSFITSIANKNYYGAAKLIFSDNPLGLTCGMVCPTSDLCV 60
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIR-----PPDAKVDFPDTKIALIGCGP 155
GGCNL+A EEGPINIGGLQQFATEVFK M I QIR PP+ + KIAL G GP
Sbjct: 61 GGCNLHATEEGPINIGGLQQFATEVFKAMNIPQIRSPLLPPPEHMPEAYSAKIALFGAGP 120
Query: 156 ASLSCATFLSRMGYDDITIYEKNTY 180
AS+SCA+FL+R+GY DITI+EK Y
Sbjct: 121 ASISCASFLARLGYSDITIFEKQEY 145
Score = 163 (62.4 bits), Expect = 6.1e-71, Sum P(2) = 6.1e-71
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVY 223
D+VTNVSPRI++GTTS LYGP Q SFLNIELISEKTA W +
Sbjct: 506 DIVTNVSPRIIRGTTSGPLYGPGQSSFLNIELISEKTAAYWCH 548
Score = 40 (19.1 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 258 VIVLGAGDTAFDCATSALRCG 278
>UNIPROTKB|F1S550 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:CU138571 EMBL:CU151845 EMBL:CU179627 EMBL:CU179674
EMBL:CU179711 EMBL:CU207270 EMBL:FP017306
Ensembl:ENSSSCT00000007532 Uniprot:F1S550
Length = 949
Score = 581 (209.6 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 110/145 (75%), Positives = 123/145 (84%)
Query: 41 RCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCM 100
RCLKCADAPCQKSCPT +DIKSFITSIS+KNYYGAAK IFSDNPLGLTCGMVCPTSDLC+
Sbjct: 2 RCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCV 61
Query: 101 GGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPP--DAKVDFPDT---KIALIGCGP 155
GGCNLYA EEG INIGGLQQFA+EVFK M I QIR P ++ P+ KIAL+G GP
Sbjct: 62 GGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGP 121
Query: 156 ASLSCATFLSRMGYDDITIYEKNTY 180
AS+SCA+FL+R+GY DITI+EK Y
Sbjct: 122 ASISCASFLARLGYSDITIFEKQEY 146
Score = 163 (62.4 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 181 DMVTNVSPRIVKGTTSRHLYGPEQGSFLNIELISEKTAYQWVYYSNCKVLSNTRTEF 237
D+VTNVSPRIV+GTTS +YGP Q SFLNIELISEKTA W C+ ++ + +F
Sbjct: 505 DIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYW-----CQSVTELKADF 556
Score = 40 (19.1 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 148 IALIGCGPASLSCATFLSRMG 168
+ ++G G + CAT R G
Sbjct: 259 VIVLGAGDTAFDCATSALRCG 279
>ZFIN|ZDB-GENE-061013-727 [details] [associations]
symbol:dpyda "dihydropyrimidine dehydrogenase a"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR009051 InterPro:IPR012285
ZFIN:ZDB-GENE-061013-727 GO:GO:0016491 GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 SUPFAM:SSF46548
OrthoDB:EOG44J2H8 EMBL:BC124687 IPI:IPI00799228
RefSeq:NP_001070776.1 UniGene:Dr.19758 ProteinModelPortal:Q08BJ9
SMR:Q08BJ9 GeneID:768165 KEGG:dre:768165 CTD:768165
InParanoid:Q08BJ9 NextBio:20918482 Uniprot:Q08BJ9
Length = 243
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 129/172 (75%), Positives = 151/172 (87%)
Query: 15 SC-SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
SC L NNFDDIKHTTLSERGAL+EA RCLKCADAPCQKSCPT ++IK+FITSI++KNYY
Sbjct: 51 SCVKLENNFDDIKHTTLSERGALREAVRCLKCADAPCQKSCPTNLNIKAFITSIANKNYY 110
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
GAA+AI SDNPLGLTCGMVCPTSDLC+GGCNLYA+EEGPINIGGLQQFAT+VFK MG+ Q
Sbjct: 111 GAARAILSDNPLGLTCGMVCPTSDLCVGGCNLYASEEGPINIGGLQQFATDVFKQMGVPQ 170
Query: 134 IR-----PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IR PPD + +KIALIGCGPAS+SCA+FL+R+GYD+I+++EK +
Sbjct: 171 IRNPDLPPPDQMPESYHSKIALIGCGPASISCASFLARLGYDNISVFEKQRF 222
>UNIPROTKB|B4DML1 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9606 "Homo sapiens" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR009051 InterPro:IPR012285 GO:GO:0016491
GO:GO:0051536 Gene3D:1.10.1060.10 SUPFAM:SSF46548 EMBL:AL356457
EMBL:AC091608 EMBL:AC093576 EMBL:AC099787 EMBL:AC114878
EMBL:AC138135 EMBL:BX908805 UniGene:Hs.335034 HGNC:HGNC:3012
ChiTaRS:DPYD EMBL:AL645494 EMBL:AK297515 IPI:IPI00909357 SMR:B4DML1
STRING:B4DML1 Ensembl:ENST00000423006 HOVERGEN:HBG074715
Uniprot:B4DML1
Length = 156
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 98/112 (87%), Positives = 104/112 (92%)
Query: 15 SCS-LVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
+C L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSI++KNYY
Sbjct: 14 NCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFITSIANKNYY 73
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEV 125
GAAK IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEGPINIGGLQQFATEV
Sbjct: 74 GAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEV 125
>UNIPROTKB|P76440 [details] [associations]
symbol:preT "NADH-dependent dihydropyrimidine dehydrogenase
subunit" species:83333 "Escherichia coli K-12" [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006208 "pyrimidine nucleobase catabolic
process" evidence=IDA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IDA] [GO:0004159 "dihydrouracil dehydrogenase (NAD+)
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA;IDA] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0003954
GO:GO:0006208 SUPFAM:SSF46548 GO:GO:0004159 PIR:A64983
RefSeq:NP_416651.1 RefSeq:YP_490385.1 ProteinModelPortal:P76440
SMR:P76440 DIP:DIP-28055N IntAct:P76440
EnsemblBacteria:EBESCT00000002435 EnsemblBacteria:EBESCT00000016843
GeneID:12930175 GeneID:949049 KEGG:ecj:Y75_p2108 KEGG:eco:b2146
PATRIC:32119635 EchoBASE:EB3827 EcoGene:EG14074 OMA:SLKMTRE
ProtClustDB:PRK11749 BioCyc:EcoCyc:G7145-MONOMER
BioCyc:ECOL316407:JW2133-MONOMER BioCyc:MetaCyc:G7145-MONOMER
Genevestigator:P76440 Uniprot:P76440
Length = 412
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 68/146 (46%), Positives = 88/146 (60%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC A + PI+IG LQ+F T+ + G+ +I P K K+A+IG G
Sbjct: 79 TEKLCQSGCTR-AGVDAPIDIGRLQRFVTDFEQQTGM-EIYQPGTKTL---GKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEKNTY 180
PA L + L+ GYD +TIYEK +
Sbjct: 134 PAGLQASVTLTNQGYD-VTIYEKEAH 158
>UNIPROTKB|Q8Z5A6 [details] [associations]
symbol:preT "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreT homolog" species:90370 "Salmonella enterica subsp.
enterica serovar Typhi" [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISS] InterPro:IPR000103 InterPro:IPR001327
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
PRINTS:PR00469 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 GO:GO:0003954 EMBL:AE014613
GenomeReviews:AE014613_GR GenomeReviews:AL513382_GR GO:GO:0006208
SUPFAM:SSF46548 GO:GO:0004159 OMA:SLKMTRE ProtClustDB:PRK11749
EMBL:AL627273 RefSeq:NP_804518.1 ProteinModelPortal:Q8Z5A6
GeneID:1069835 KEGG:stt:t0669 KEGG:sty:STY2416 PATRIC:18542783
Uniprot:Q8Z5A6
Length = 413
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/143 (46%), Positives = 87/143 (60%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKTR---GKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
PA L + L+ +GYD +TIYEK
Sbjct: 134 PAGLQASVTLTHLGYD-VTIYEK 155
>UNIPROTKB|Q8ZNL8 [details] [associations]
symbol:preT "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreT" species:99287 "Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS] InterPro:IPR000103
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 PRINTS:PR00469 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:AE006468 GenomeReviews:AE006468_GR GO:GO:0051536
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0003954 GO:GO:0006208 SUPFAM:SSF46548 GO:GO:0004159
OMA:SLKMTRE ProtClustDB:PRK11749 RefSeq:NP_461131.1
ProteinModelPortal:Q8ZNL8 PRIDE:Q8ZNL8 GeneID:1253708
KEGG:stm:STM2186 PATRIC:32382965 Uniprot:Q8ZNL8
Length = 413
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/143 (46%), Positives = 87/143 (60%)
Query: 35 ALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCP 94
A+KEASRCL C DAPC ++CP Q D FI SI +N+ GAA+ I +N LG C VCP
Sbjct: 19 AIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCP 78
Query: 95 TSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCG 154
T LC GC ++ PI+I LQ+F T+ F+ QI P +K K+A+IG G
Sbjct: 79 TEKLCQRGCTRSGIDK-PIDIARLQRFITD-FEQQTAMQIYQPGSKTR---GKVAIIGAG 133
Query: 155 PASLSCATFLSRMGYDDITIYEK 177
PA L + L+ +GYD +TIYEK
Sbjct: 134 PAGLQASVTLTHLGYD-VTIYEK 155
>TIGR_CMR|SPO_1776 [details] [associations]
symbol:SPO_1776 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008152 "metabolic process" evidence=ISS] [GO:0015036
"disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR000103 InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 PRINTS:PR00469
InterPro:IPR016040 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK11749 RefSeq:YP_167013.1 ProteinModelPortal:Q5LSJ2
GeneID:3193113 KEGG:sil:SPO1776 PATRIC:23376877 OMA:PKPGGLN
Uniprot:Q5LSJ2
Length = 445
Score = 290 (107.1 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 65/163 (39%), Positives = 88/163 (53%)
Query: 14 TSCSLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYY 73
+S L NFDD+ H + A A RC C DAPCQ +CPT+IDI FI I +
Sbjct: 17 SSEELAANFDDL-HPAYAPHEAAVAADRCYFCYDAPCQTACPTEIDIPLFIRQIQTGHPE 75
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ 133
AA+ I N LG C VCPT LC C AAE P+ IG LQ++AT+ G+
Sbjct: 76 AAARTILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRYATDTLMARGVH- 134
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + ++A++G GPA L+CA L+ +G+D + I+E
Sbjct: 135 ---PFTRAAPSGKRVAVVGAGPAGLACAHRLALLGHD-VVIHE 173
>TIGR_CMR|CHY_1991 [details] [associations]
symbol:CHY_1991 "glutamate synthase (NADPH),
homotetrameric" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0004355 "glutamate synthase (NADPH) activity"
evidence=ISS] [GO:0006537 "glutamate biosynthetic process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749 RefSeq:YP_360810.1
ProteinModelPortal:Q3AAM4 STRING:Q3AAM4 GeneID:3728589
KEGG:chy:CHY_1991 PATRIC:21277069 OMA:AYRRTIN
BioCyc:CHYD246194:GJCN-1990-MONOMER InterPro:IPR006004
TIGRFAMs:TIGR01316 Uniprot:Q3AAM4
Length = 464
Score = 244 (91.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 60/158 (37%), Positives = 82/158 (51%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ S A+KEA RCL C C++ CP ++DI FI I + A I
Sbjct: 23 NFDEVA-LGYSLELAMKEAERCLDCKKPACKQGCPVEVDIPDFIRFIKAGDIDSAINKIK 81
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT--EVFKDMGISQIRPPD 138
N L CG VCP C G C L E P+ IG L++FA E+ K + PP
Sbjct: 82 EKNALPAICGRVCPQESQCEGQCVLGKKGE-PVAIGRLERFAADYELAKGTQNVTVAPPT 140
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K K+A+IG GPA L+CA L+++G+ +TI+E
Sbjct: 141 GK------KVAVIGSGPAGLTCAADLAKLGHK-VTIFE 171
>TIGR_CMR|GSU_3057 [details] [associations]
symbol:GSU_3057 "glutamate synthase (NADPH),
homotetrameric" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000031439
Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
OMA:AYRRTIN InterPro:IPR006004 TIGRFAMs:TIGR01316
RefSeq:NP_954099.1 ProteinModelPortal:Q748E7 GeneID:2686900
KEGG:gsu:GSU3057 PATRIC:22028965
BioCyc:GSUL243231:GH27-2997-MONOMER Uniprot:Q748E7
Length = 470
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 54/160 (33%), Positives = 85/160 (53%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NFD++ E A++EA RC++C + C CP + I FIT+++ N AA+ +
Sbjct: 29 NFDEVNRGLTPEE-AVREAQRCIRCTNRQCVAGCPVGVSIPEFITALADGNLREAARILT 87
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQF----ATEVFKDMGISQIRP 136
DN L CG VCP C C + + P+ IG L++F AT ++G + P
Sbjct: 88 RDNALPAVCGRVCPQETQCEARC-VRGIKGEPVAIGYLERFVADWATANVAELGDEPLPP 146
Query: 137 PDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
P + ++A++GCGPA L+ A L+R G+ +TI+E
Sbjct: 147 PTGR------RVAVVGCGPAGLTAAGELARKGHG-VTIFE 179
>TIGR_CMR|DET_0038 [details] [associations]
symbol:DET_0038 "glutamate synthase (NADPH),
homotetrameric" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
InterPro:IPR006004 TIGRFAMs:TIGR01316 RefSeq:YP_180793.1
ProteinModelPortal:Q3ZAF6 STRING:Q3ZAF6 GeneID:3229074
KEGG:det:DET0038 PATRIC:21607179 OMA:CSANEFL
BioCyc:DETH243164:GJNF-38-MONOMER Uniprot:Q3ZAF6
Length = 465
Score = 228 (85.3 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 53/158 (33%), Positives = 82/158 (51%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKA 78
+ NF ++ T + A EA+RCL+C C + CP IDI FI ++ N AA+
Sbjct: 20 IQNFSEVA-TGYTPADAHTEAARCLQCKKRYCVEGCPVNIDIPEFILALRDGNMPEAARV 78
Query: 79 IFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD 138
+ N L CG VCP C C L +E PI IG L++F + + +++ P
Sbjct: 79 LKKTNSLPGVCGRVCPQETQCEQACILNK-KEAPIAIGRLERFVADWERGHS-AEVNLPK 136
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
+ K A++G GPA L+ A L+R+G+D +T++E
Sbjct: 137 SLKPKSGKKAAVVGAGPAGLTAAAELARLGHD-VTLFE 173
>UNIPROTKB|P37127 [details] [associations]
symbol:aegA species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009987 "cellular process"
evidence=ND] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR006006 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 InterPro:IPR017900
Prosite:PS00198 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 EMBL:L34011 PIR:C65022 RefSeq:NP_416963.1
RefSeq:YP_490695.1 ProteinModelPortal:P37127 SMR:P37127
DIP:DIP-9060N IntAct:P37127 PRIDE:P37127
EnsemblBacteria:EBESCT00000003403 EnsemblBacteria:EBESCT00000017287
GeneID:12931935 GeneID:947383 KEGG:ecj:Y75_p2420 KEGG:eco:b2468
PATRIC:32120319 EchoBASE:EB2308 EcoGene:EG12409
HOGENOM:HOG000031439 OMA:VESRYRY ProtClustDB:PRK12769
BioCyc:EcoCyc:EG12409-MONOMER BioCyc:ECOL316407:JW2452-MONOMER
Genevestigator:P37127 GO:GO:0016639 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 Uniprot:P37127
Length = 659
Score = 214 (80.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 52/158 (32%), Positives = 83/158 (52%)
Query: 22 FDDIKHTTLSERGALKEASRCLKCAD-APCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
FD+I +++ A +EASRCLKC + + C+ +CP I +I + N A +
Sbjct: 208 FDEIYLPFRADQ-AQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSH 266
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAK 140
N L G VCP LC G C + E G + IG ++++ ++ G RP +
Sbjct: 267 QTNTLPEITGRVCPQDRLCEGACTI-RDEHGAVTIGNIERYISDQALAKGW---RPDLSH 322
Query: 141 VDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
V D ++A+IG GPA L+CA L+R G +T+Y+++
Sbjct: 323 VTKVDKRVAIIGAGPAGLACADVLTRNGVG-VTVYDRH 359
>UNIPROTKB|Q4KJI5 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK12810 RefSeq:YP_257598.1 ProteinModelPortal:Q4KJI5
STRING:Q4KJI5 GeneID:3481045 KEGG:pfl:PFL_0454 PATRIC:19870053
OMA:NDFQFID BioCyc:PFLU220664:GIX8-455-MONOMER Uniprot:Q4KJI5
Length = 472
Score = 210 (79.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 48/141 (34%), Positives = 71/141 (50%)
Query: 38 EASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSD 97
+A RCL C + C+ CP I +++ ++ N AA+ N L CG VCP
Sbjct: 46 QAHRCLGCGNPYCEWKCPVHNFIPNWLKLVAEGNILAAAELSHQTNTLPEVCGRVCPQDR 105
Query: 98 LCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPAS 157
LC G C L G + IG ++++ T+ MG RP +KV ++A+IG GPA
Sbjct: 106 LCEGACTLNDGF-GAVTIGSVEKYITDTAFAMGW---RPDMSKVKPTGKRVAIIGAGPAG 161
Query: 158 LSCATFLSRMGYDDITIYEKN 178
L CA L R G + +++KN
Sbjct: 162 LGCADVLVRGGVTPV-VFDKN 181
>UNIPROTKB|Q46820 [details] [associations]
symbol:ygfT "fused predicted oxidoreductase, Fe-S subunit
and nucleotide-binding subunit" species:83333 "Escherichia coli
K-12" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001327 InterPro:IPR001450 InterPro:IPR006006
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR023753
Pfam:PF00037 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 GO:GO:0016639
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 EMBL:U28375 PIR:G65072
RefSeq:NP_417363.2 RefSeq:YP_491088.1 ProteinModelPortal:Q46820
SMR:Q46820 DIP:DIP-12175N PRIDE:Q46820
EnsemblBacteria:EBESCT00000001813 EnsemblBacteria:EBESCT00000017804
GeneID:12933341 GeneID:949018 KEGG:ecj:Y75_p2819 KEGG:eco:b2887
PATRIC:32121182 EchoBASE:EB2881 EcoGene:EG13070 OMA:KVVPRIE
ProtClustDB:PRK12809 BioCyc:EcoCyc:G7506-MONOMER
BioCyc:ECOL316407:JW5469-MONOMER Genevestigator:Q46820
Uniprot:Q46820
Length = 639
Score = 212 (79.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 54/175 (30%), Positives = 85/175 (48%)
Query: 5 SSLAGINVFTSCSLVNNFDDIKHTTLSERGALKEASRCLKCAD-APCQKSCPTQIDIKSF 63
+S G + ++ +F +I + L + A E+ RC+ CA+ A C CP I +
Sbjct: 174 NSRKGADKISASERKTHFGEI-YCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDY 232
Query: 64 ITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFAT 123
I + AA+ + L CG VCP LC G C L G ++IG L+++ T
Sbjct: 233 IRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTL-KDHSGAVSIGNLERYIT 291
Query: 124 EVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ MG RP +KV K+A+IG GPA L CA L+R G + +++++
Sbjct: 292 DTALAMGW---RPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRH 342
>UNIPROTKB|P09832 [details] [associations]
symbol:gltD "glutamate synthase, small subunit"
species:83333 "Escherichia coli K-12" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0097054 "L-glutamate
biosynthetic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA;IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 PROSITE:PS51379 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 EMBL:U18997 GO:GO:0051539
GO:GO:0006537 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 GO:GO:0097054 EMBL:M18747 BRENDA:1.4.1.13
PIR:G65112 RefSeq:NP_417680.1 RefSeq:YP_491398.1
ProteinModelPortal:P09832 SMR:P09832 DIP:DIP-9803N IntAct:P09832
MINT:MINT-1248739 SWISS-2DPAGE:P09832 PaxDb:P09832 PRIDE:P09832
EnsemblBacteria:EBESCT00000004091 EnsemblBacteria:EBESCT00000017797
GeneID:12933433 GeneID:947723 KEGG:ecj:Y75_p3133 KEGG:eco:b3213
PATRIC:32121848 EchoBASE:EB0399 EcoGene:EG10404 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 BioCyc:EcoCyc:GLUSYNSMALL-MONOMER
BioCyc:ECOL316407:JW3180-MONOMER BioCyc:MetaCyc:GLUSYNSMALL-MONOMER
BioCyc:MOB3B:GLUSYNSMALL-MONOMER Genevestigator:P09832
Uniprot:P09832
Length = 472
Score = 207 (77.9 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 48/148 (32%), Positives = 75/148 (50%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
SE A +A RCL C + C+ CP I +++ + + AA+ N L CG
Sbjct: 36 SEGQAKAQADRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCG 95
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP LC G C L E G + IG ++++ + +MG RP + V K+A+
Sbjct: 96 RVCPQDRLCEGSCTLND-EFGAVTIGNIERYINDKAFEMGW---RPDMSGVKQTGKKVAI 151
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKN 178
IG GPA L+CA L+R G + +++++
Sbjct: 152 IGAGPAGLACADVLTRNGVKAV-VFDRH 178
>TIGR_CMR|SO_1324 [details] [associations]
symbol:SO_1324 "glutamate synthase, small subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
Pfam:PF00070 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006537
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK12810
OMA:NDFQFID RefSeq:NP_716944.1 ProteinModelPortal:Q8EHA5
GeneID:1169145 KEGG:son:SO_1324 PATRIC:23522304 Uniprot:Q8EHA5
Length = 468
Score = 206 (77.6 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 48/142 (33%), Positives = 72/142 (50%)
Query: 37 KEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTS 96
++A RCL C + C+ CP I +++ AA + N L CG VCP
Sbjct: 41 EQADRCLDCGNPYCEWKCPLHNYIPNWLKLAQQGRIMEAADLVHETNTLPEICGRVCPQD 100
Query: 97 DLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQ-IRPPDAKVDFPDTKIALIGCGP 155
LC G C L A + G + IG ++++ T D I+Q RP +KV K+A++G GP
Sbjct: 101 RLCEGACTLNA-DFGAVTIGNVEKYIT----DTAIAQGWRPDMSKVTPRKEKVAIVGAGP 155
Query: 156 ASLSCATFLSRMGYDDITIYEK 177
A L CA L+R G + +++K
Sbjct: 156 AGLGCADILARNGVKAV-VFDK 176
>UNIPROTKB|Q9KPJ0 [details] [associations]
symbol:VC_2377 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 206 (77.6 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 59/198 (29%), Positives = 96/198 (48%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+++ A +A RCL C + C+ CP I ++ + AA N L CG
Sbjct: 37 TKQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQTNSLPEVCG 96
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP LC G C L A + G + IG ++++ T+ +MG +P + V + D K+A+
Sbjct: 97 RVCPQDRLCEGSCTLNA-DFGAVTIGNIEKYITDTAFEMGW---KPDMSNVVWTDKKVAI 152
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEK--NTYDMVTNVSP--RIVKGTTS--RHLYGPEQ 204
IG GPA L+ A L R G + ++++ ++T P ++ KG R ++ E
Sbjct: 153 IGAGPAGLAAADILVRNGVRPV-VFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFS-EM 210
Query: 205 G-SF-LNIELISEKTAYQ 220
G F LN+E+ + T Q
Sbjct: 211 GIEFRLNVEVGQDITLQQ 228
>TIGR_CMR|VC_2377 [details] [associations]
symbol:VC_2377 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 206 (77.6 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 59/198 (29%), Positives = 96/198 (48%)
Query: 31 SERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCG 90
+++ A +A RCL C + C+ CP I ++ + AA N L CG
Sbjct: 37 TKQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQTNSLPEVCG 96
Query: 91 MVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIAL 150
VCP LC G C L A + G + IG ++++ T+ +MG +P + V + D K+A+
Sbjct: 97 RVCPQDRLCEGSCTLNA-DFGAVTIGNIEKYITDTAFEMGW---KPDMSNVVWTDKKVAI 152
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEK--NTYDMVTNVSP--RIVKGTTS--RHLYGPEQ 204
IG GPA L+ A L R G + ++++ ++T P ++ KG R ++ E
Sbjct: 153 IGAGPAGLAAADILVRNGVRPV-VFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFS-EM 210
Query: 205 G-SF-LNIELISEKTAYQ 220
G F LN+E+ + T Q
Sbjct: 211 GIEFRLNVEVGQDITLQQ 228
>TIGR_CMR|CPS_4502 [details] [associations]
symbol:CPS_4502 "glutamate synthase, small subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 RefSeq:YP_271150.1
ProteinModelPortal:Q47VM2 STRING:Q47VM2 GeneID:3522364
KEGG:cps:CPS_4502 PATRIC:21471827
BioCyc:CPSY167879:GI48-4511-MONOMER Uniprot:Q47VM2
Length = 475
Score = 201 (75.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 50/159 (31%), Positives = 78/159 (49%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
NF +I +E+ A +A RCL C + C+ CP I ++ ++ + AA
Sbjct: 27 NFVEIYQPMGNEQSA-GQADRCLDCGNPYCEWKCPVHNYIPQWLELVTENRIFEAADLCH 85
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPD-A 139
N L CG VCP LC C L E G + IG +++ T D I+Q P+ +
Sbjct: 86 ETNSLPEMCGRVCPQDRLCESACTLND-EFGAVTIGNIEKHIT----DTAIAQGWKPNLS 140
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
V ++A+IG GPA + CA L+R G D + +Y+++
Sbjct: 141 HVVKTGKRVAVIGAGPAGIGCADVLTRNGVD-VVVYDRH 178
>UNIPROTKB|Q0C617 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR006006 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 EMBL:CP000158 GenomeReviews:CP000158_GR
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_758826.1 ProteinModelPortal:Q0C617 STRING:Q0C617
GeneID:4289253 KEGG:hne:HNE_0092 PATRIC:32212968 OMA:ANIDNEN
BioCyc:HNEP228405:GI69-139-MONOMER Uniprot:Q0C617
Length = 481
Score = 194 (73.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 21 NFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIF 80
+F +I + S A +ASRC +C CQ+ CP Q +I ++ + A +
Sbjct: 27 DFREI-YGEFSPDAAKAQASRCSQCGVPFCQQGCPLQNNIPDWLKLAAEDRLEEAWRVSS 85
Query: 81 SDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMG-ISQIRPPDA 139
+ N + CG +CP LC G C + + G + IG ++++ T+ G I I+PP
Sbjct: 86 ATNNMPEICGRICPQDRLCEGICTIEQSGHGTVTIGSVEKYITDTAWAEGWIQPIKPPRE 145
Query: 140 KVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYD 181
+ +IG GP L+ A L R GY +T+Y+ YD
Sbjct: 146 RTQ----SAGIIGAGPGGLAAAEQLRRKGYQ-VTVYD--AYD 180
>TIGR_CMR|SPO_3770 [details] [associations]
symbol:SPO_3770 "glutamate synthase, small subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_168965.1 ProteinModelPortal:Q5LLZ4 GeneID:3196508
KEGG:sil:SPO3770 PATRIC:23381037 OMA:EFRIPIY Uniprot:Q5LLZ4
Length = 477
Score = 188 (71.2 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 27 HTTLSERGALK---EASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDN 83
H +E A+K +ASRC +C CQ CP +I ++ + A + + N
Sbjct: 30 HEIYAEYAAVKAAEQASRCSQCGVPYCQTHCPLHNNIPDWLRLTATGRLQEAYETSQATN 89
Query: 84 PLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDF 143
CG +CP LC G C + + G + IG ++++ T+ DMG ++P +
Sbjct: 90 TFPEICGRICPQDRLCEGNCVIEQSGHGTVTIGAVEKYITDTAWDMG--WVKPASPVAER 147
Query: 144 PDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYD 181
++ + +IG GP L+ A L + G +T+Y++ YD
Sbjct: 148 SES-VGIIGAGPGGLAAADMLRQAGVQ-VTVYDR--YD 181
>UNIPROTKB|Q74FU5 [details] [associations]
symbol:sfrB "NADPH oxidoreductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 48 APCQKSCPTQIDIKSFITSISHKNY-YGAAKAIFSDN-PLGLTCGMVCPTSDLCMGGCNL 105
APC CP IDI ++I +I K Y + + I DN PL CG VCP C C
Sbjct: 162 APCMDRCPAHIDIPAYIEAI--KEYRFDESLDIIRDNMPLPSVCGRVCPHP--CETHCRR 217
Query: 106 YAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLS 165
++ +NI L++ A++ ++ M PP + K+A++G GPA L+CA +L+
Sbjct: 218 KNVDDS-VNIMVLKRSASD-YEWM--HNAAPPMQPKPQKNKKVAIVGAGPAGLACAYYLA 273
Query: 166 RMGYDDITIYE 176
GY TIYE
Sbjct: 274 LEGYP-CTIYE 283
>TIGR_CMR|GSU_0510 [details] [associations]
symbol:GSU_0510 "Fe(III) reductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 48 APCQKSCPTQIDIKSFITSISHKNY-YGAAKAIFSDN-PLGLTCGMVCPTSDLCMGGCNL 105
APC CP IDI ++I +I K Y + + I DN PL CG VCP C C
Sbjct: 162 APCMDRCPAHIDIPAYIEAI--KEYRFDESLDIIRDNMPLPSVCGRVCPHP--CETHCRR 217
Query: 106 YAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLS 165
++ +NI L++ A++ ++ M PP + K+A++G GPA L+CA +L+
Sbjct: 218 KNVDDS-VNIMVLKRSASD-YEWM--HNAAPPMQPKPQKNKKVAIVGAGPAGLACAYYLA 273
Query: 166 RMGYDDITIYE 176
GY TIYE
Sbjct: 274 LEGYP-CTIYE 283
>TIGR_CMR|SO_0988 [details] [associations]
symbol:SO_0988 "formate dehydrogenase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR001041 InterPro:IPR001327
InterPro:IPR001450 InterPro:IPR006478 InterPro:IPR006656
InterPro:IPR006657 InterPro:IPR006963 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 Pfam:PF00384 Pfam:PF01568
Pfam:PF04879 Pfam:PF12838 PROSITE:PS51085 PROSITE:PS51379
SMART:SM00926 InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198
Gene3D:3.40.50.720 GO:GO:0009055 GO:GO:0050660 GO:GO:0051536
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0030151 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0015942 GO:GO:0008863 GO:GO:0009326 HOGENOM:HOG000031440
KO:K00123 TIGRFAMs:TIGR01591 HSSP:P07658 RefSeq:NP_716617.1
ProteinModelPortal:Q8EI61 GeneID:1168830 KEGG:son:SO_0988
PATRIC:23521625 OMA:MTNDIPS ProtClustDB:CLSK906042 Uniprot:Q8EI61
Length = 1428
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 47 DAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLY 106
+APCQ++CP +D++ ++ I+ ++ A K I PL L+ G VCP C C
Sbjct: 111 EAPCQQACPAGVDVQRYLYHIAQGDHTQAVKVIKETLPLPLSIGRVCPA--FCETECRRG 168
Query: 107 AAEEGPINIGGLQQFATEV--FKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFL 164
++ PI I L++ A ++ D + +PP ++ KIA+IG GPA LS +L
Sbjct: 169 LIDD-PIAIRQLKRHAADLDLADDEHGNSYQPP--RLADTGKKIAIIGSGPAGLSAGYYL 225
Query: 165 SRMGYDDITIYE 176
S G++ I I+E
Sbjct: 226 SNQGHN-IEIFE 236
>SGD|S000002330 [details] [associations]
symbol:GLT1 "NAD(+)-dependent glutamate synthase (GOGAT)"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0015930
"glutamate synthase activity" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0045181 "glutamate synthase
activity, NAD(P)H as acceptor" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA;IEP] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=IEA;IMP;IDA] [GO:0019676 "ammonia assimilation cycle"
evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097054 "L-glutamate biosynthetic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016638 "oxidoreductase activity, acting
on the CH-NH2 group of donors" evidence=IEA] InterPro:IPR000583
InterPro:IPR001327 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 InterPro:IPR016040
SGD:S000002330 GO:GO:0005739 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 EMBL:BK006938 GO:GO:0051538
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 EMBL:Z67750
GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278
SUPFAM:SSF46548 GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60
SUPFAM:SSF69336 KO:K00264 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OrthoDB:EOG444PTC
EMBL:X89221 EMBL:Z74219 PIR:S61041 RefSeq:NP_010110.1
ProteinModelPortal:Q12680 SMR:Q12680 DIP:DIP-6490N IntAct:Q12680
MINT:MINT-647261 STRING:Q12680 PaxDb:Q12680 PeptideAtlas:Q12680
PRIDE:Q12680 EnsemblFungi:YDL171C GeneID:851383 KEGG:sce:YDL171C
CYGD:YDL171c OMA:WMAARQA BioCyc:MetaCyc:MONOMER-13146
SABIO-RK:Q12680 NextBio:968525 Genevestigator:Q12680
GermOnline:YDL171C Uniprot:Q12680
Length = 2145
Score = 161 (61.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPC--QKSCPTQIDIKSFITSISHKNYYGAA 76
VN++ + + ++++ A + +RC+ C C CP I F + KN + A
Sbjct: 1661 VNDWKEFTNP-ITKKDAKYQTARCMDCGTPFCLSDTGCPLSNIIPKF-NELLFKNQWKLA 1718
Query: 77 --KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATE-VFKDMGISQ 133
K + ++N T G VCP C G C L E+ P+ I +++ + FK+ I
Sbjct: 1719 LDKLLETNNFPEFT-GRVCPAP--CEGACTLGIIED-PVGIKSVERIIIDNAFKEGWIKP 1774
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
PP + F + +IG GPA L+CA L+R G+ +T+YE++
Sbjct: 1775 C-PPSTRTGFT---VGVIGSGPAGLACADMLNRAGHT-VTVYERS 1814
>TIGR_CMR|DET_0123 [details] [associations]
symbol:DET_0123 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008152 "metabolic process" evidence=ISS]
[GO:0015036 "disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR001450 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0046872 GO:GO:0016491 GO:GO:0051539 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0493 Gene3D:1.10.1060.10
SUPFAM:SSF46548 RefSeq:YP_180873.1 ProteinModelPortal:Q3ZA76
STRING:Q3ZA76 GeneID:3230519 KEGG:det:DET0123 PATRIC:21607333
HOGENOM:HOG000275479 OMA:HEATIFE ProtClustDB:CLSK837616
BioCyc:DETH243164:GJNF-123-MONOMER Uniprot:Q3ZA76
Length = 643
Score = 149 (57.5 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 46/136 (33%), Positives = 70/136 (51%)
Query: 48 APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDN-PLGLTCGMVCPTSDLCMGGCNLY 106
APC ++CP +DI ++ ++ N AA A+ + P CG VC C C
Sbjct: 115 APCTRACPAGLDIPRYVRFVAEGNA-PAATAVMREKIPFPSVCGYVC--FHPCELECQRQ 171
Query: 107 AAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDT--KIALIGCGPASLSCATFL 164
+E PI I L+++A E D G + + K+ P T K+A+IG GPA L+ A FL
Sbjct: 172 KFDE-PIAIRALKRYAAE--NDDGSWK---NNLKIA-PSTGKKVAIIGSGPAGLTSAYFL 224
Query: 165 SRMGYDDITIYEKNTY 180
+ +G++ TI+E Y
Sbjct: 225 TLLGHE-ATIFESMEY 239
>UNIPROTKB|Q46811 [details] [associations]
symbol:ygfK "predicted oxidoreductase, Fe-S subunit"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA;TAS] InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 Pfam:PF13187 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 Gene3D:3.20.20.70 GO:GO:0005506
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016491 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 EMBL:U28375 SUPFAM:SSF46548 PIR:F65071
RefSeq:NP_417354.1 RefSeq:YP_491080.1 ProteinModelPortal:Q46811
SMR:Q46811 DIP:DIP-28091N IntAct:Q46811 PRIDE:Q46811
EnsemblBacteria:EBESCT00000000821 EnsemblBacteria:EBESCT00000015587
GeneID:12933331 GeneID:949068 KEGG:ecj:Y75_p2811 KEGG:eco:b2878
PATRIC:32121166 EchoBASE:EB2873 EcoGene:EG13061
HOGENOM:HOG000277437 KO:K12527 OMA:CPNRANI ProtClustDB:PRK09853
BioCyc:EcoCyc:G7497-MONOMER BioCyc:ECOL316407:JW5923-MONOMER
Genevestigator:Q46811 InterPro:IPR017701 TIGRFAMs:TIGR03315
Uniprot:Q46811
Length = 1032
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 47/167 (28%), Positives = 74/167 (44%)
Query: 26 KHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPL 85
KH ER + E C APC +C + DI +I + Y A + I+ N L
Sbjct: 436 KHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNAL 495
Query: 86 GLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQI-RPPDAKVDFP 144
G +C C C + +NI L++ A E D + +P + P
Sbjct: 496 PAITGHICDHQ--CQYNCTRLDYDSA-LNIRELKKVALEKGWDEYKQRWHKPAGSGSRHP 552
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEK--NTYDMVTNVSPR 189
+A+IG GPA L+ FL+R G+ +T++E+ N +V N+ P+
Sbjct: 553 ---VAVIGAGPAGLAAGYFLARAGHP-VTLFEREANAGGVVKNIIPQ 595
>ASPGD|ASPL0000027159 [details] [associations]
symbol:gltA species:162425 "Emericella nidulans"
[GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISA;RCA;IMP] [GO:0009064 "glutamine family amino acid
metabolic process" evidence=IGI;RCA;IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 EMBL:BN001305
GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0016040 TIGRFAMs:TIGR01317
OMA:WMAARQA ProteinModelPortal:C8VEZ6 EnsemblFungi:CADANIAT00003118
Uniprot:C8VEZ6
Length = 2126
Score = 145 (56.1 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 30 LSERGALKEASRCLKCADAPCQKS--CPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGL 87
L+E +++RC+ C CQ CP I + + + A + N
Sbjct: 1646 LTEDELKYQSARCMDCGVPFCQSDTGCPISNIIPKWNELVFQNQWQDALNRLLMTNNFPE 1705
Query: 88 TCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTK 147
G VCP C G C L E P+ I ++ + +MG RPP +
Sbjct: 1706 FTGRVCPAP--CEGACVL-GINEDPVGIKSIECAIIDRGFEMGWMVPRPPPVRTG---KT 1759
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEK 177
+A+IG GPA L+ A L+R+G+ +T+YE+
Sbjct: 1760 VAIIGSGPAGLAAADQLNRVGHS-VTVYER 1788
>UNIPROTKB|Q9KPJ3 [details] [associations]
symbol:VC_2374 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810 OMA:WAEGWVK
PIR:F82085 RefSeq:NP_232004.1 ProteinModelPortal:Q9KPJ3
DNASU:2613043 GeneID:2613043 KEGG:vch:VC2374 PATRIC:20083773
Uniprot:Q9KPJ3
Length = 489
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 37 KEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTS 96
++ASRC+ C C CP I F ++ ++ A + S N G VCP
Sbjct: 42 QQASRCMDCGVPFCHNGCPIGNIIPEFNDAVYRDSWEEAWNILSSTNNFPEFTGRVCPAP 101
Query: 97 DLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPA 156
C C L + PI I +++ E G ++ + P ++ +A+IG GPA
Sbjct: 102 --CETACVL-GINQDPITICNIEKTIVERAYQEGYAKPKTPRSRTG---KTVAIIGSGPA 155
Query: 157 SLSCATFLSRMGYDDITIYEKN 178
L+ A L+ G+ +T++E++
Sbjct: 156 GLAAAEQLNAAGHS-VTVFERD 176
>TIGR_CMR|VC_2374 [details] [associations]
symbol:VC_2374 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006005
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 PROSITE:PS51379 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810 OMA:WAEGWVK
PIR:F82085 RefSeq:NP_232004.1 ProteinModelPortal:Q9KPJ3
DNASU:2613043 GeneID:2613043 KEGG:vch:VC2374 PATRIC:20083773
Uniprot:Q9KPJ3
Length = 489
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 37 KEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTS 96
++ASRC+ C C CP I F ++ ++ A + S N G VCP
Sbjct: 42 QQASRCMDCGVPFCHNGCPIGNIIPEFNDAVYRDSWEEAWNILSSTNNFPEFTGRVCPAP 101
Query: 97 DLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPA 156
C C L + PI I +++ E G ++ + P ++ +A+IG GPA
Sbjct: 102 --CETACVL-GINQDPITICNIEKTIVERAYQEGYAKPKTPRSRTG---KTVAIIGSGPA 155
Query: 157 SLSCATFLSRMGYDDITIYEKN 178
L+ A L+ G+ +T++E++
Sbjct: 156 GLAAAEQLNAAGHS-VTVFERD 176
>TAIR|locus:2178461 [details] [associations]
symbol:GLT1 "NADH-dependent glutamate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA;IMP] [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA]
[GO:0015930 "glutamate synthase activity" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA;IDA;IMP]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016638
"oxidoreductase activity, acting on the CH-NH2 group of donors"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0042128 "nitrate assimilation" evidence=TAS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009536 "plastid" evidence=TAS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0009570
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
EMBL:AB020754 GO:GO:0051538 GO:GO:0006537 GO:GO:0048589
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
ProtClustDB:CLSN2683760 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OMA:WMAARQA HSSP:P55038
EMBL:AY099795 EMBL:AK222185 EMBL:AK230382 IPI:IPI00521970
RefSeq:NP_001190529.1 RefSeq:NP_001190530.1 RefSeq:NP_200158.2
UniGene:At.67093 UniGene:At.8951 ProteinModelPortal:Q9LV03
SMR:Q9LV03 STRING:Q9LV03 PaxDb:Q9LV03 PRIDE:Q9LV03
EnsemblPlants:AT5G53460.1 EnsemblPlants:AT5G53460.2
EnsemblPlants:AT5G53460.3 GeneID:835427 KEGG:ath:AT5G53460
TAIR:At5g53460 InParanoid:Q9LV03 PhylomeDB:Q9LV03 BRENDA:1.4.1.14
Genevestigator:Q9LV03 Uniprot:Q9LV03
Length = 2208
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/166 (27%), Positives = 78/166 (46%)
Query: 19 VNNFDDIKHTTLSERGAL--KEASRCLKCADAPCQKS---CPTQIDIKSFITSISHKNYY 73
+N+++++ S+ G L +++RC+ C C + CP I F + +
Sbjct: 1722 LNDWNEVMEE--SKPGPLLTTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWQ 1779
Query: 74 GAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQ-QFATEVFKDMGIS 132
A + N G VCP C G C L E P++I ++ + F++ G
Sbjct: 1780 EALNRLLETNNFPEFTGRVCPAP--CEGSCVL-GIIENPVSIKSIECAIIDKAFEE-GWM 1835
Query: 133 QIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
RPP + K+A+IG GPA L+ A L++MG+ +T+YE++
Sbjct: 1836 VPRPPLKRTG---KKVAIIGSGPAGLAAADQLNKMGHL-VTVYERS 1877
>TIGR_CMR|DET_0866 [details] [associations]
symbol:DET_0866 "hydrogenase subunit, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008901
"ferredoxin hydrogenase activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009375 "ferredoxin
hydrogenase complex" evidence=ISS] InterPro:IPR001268
InterPro:IPR012285 Pfam:PF00329 GO:GO:0051536 GO:GO:0008137
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0493
Gene3D:1.10.1060.10 RefSeq:YP_181592.1 ProteinModelPortal:Q3Z857
STRING:Q3Z857 GeneID:3229822 KEGG:det:DET0866 PATRIC:21608791
HOGENOM:HOG000275344 OMA:NIYLCAS ProtClustDB:CLSK837232
BioCyc:DETH243164:GJNF-867-MONOMER Uniprot:Q3Z857
Length = 461
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 48 APCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTSDLCMGGCNLYA 107
APCQ++CP ID+ ++ NY A I P G VC C C
Sbjct: 129 APCQRACPAGIDVSRYVRLCGEGNYDAALAVIKQAMPFPGILGRVCLAP--CESACRQGK 186
Query: 108 AEEGPINIGGLQQFATEV--FKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLS 165
E I+I L++ A E + D ++ P K K+A++G GPA L+ A FL+
Sbjct: 187 CGEA-ISIKQLKRAAYEYGHYTDTATAK---PTGK------KVAVVGSGPAGLAAAYFLT 236
Query: 166 RMGYDDITIYE 176
+ G+ +T++E
Sbjct: 237 KKGHK-VTVFE 246
>POMBASE|SPAPB1E7.07 [details] [associations]
symbol:glt1 "glutamate synthase Glt1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=ISO] [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 PomBase:SPAPB1E7.07 GO:GO:0005829 GO:GO:0005739
EMBL:CU329670 Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660
GO:GO:0051538 GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10
GO:GO:0004355 GO:GO:0010181 GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 EMBL:D89165 PIR:T42527
RefSeq:NP_594133.1 ProteinModelPortal:Q9C102 STRING:Q9C102
PRIDE:Q9C102 EnsemblFungi:SPAPB1E7.07.1 GeneID:2543509
KEGG:spo:SPAPB1E7.07 HOGENOM:HOG000031559 OMA:PPAWQSN
OrthoDB:EOG444PTC NextBio:20804519 Uniprot:Q9C102
Length = 2111
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/142 (27%), Positives = 63/142 (44%)
Query: 38 EASRCLKCADAPCQKS--CPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
+ +RC+ C CQ CP I ++ + + + A + N G VCP
Sbjct: 1652 QTARCMDCGTPFCQSDYGCPISNKIFTWNDLVFKQQWKEALTQLLLTNNFPEFTGRVCPA 1711
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C G C L E P+ I +++ + + G RPP + ++A+IG GP
Sbjct: 1712 P--CEGACTL-GIIESPVGIKSVERAIIDKAWEEGWIVPRPPAERTG---RRVAIIGSGP 1765
Query: 156 ASLSCATFLSRMGYDDITIYEK 177
A L+ A L+R G+ + IYE+
Sbjct: 1766 AGLAAADQLNRAGHH-VVIYER 1786
>UNIPROTKB|P96219 [details] [associations]
symbol:gltD "Glutamate synthase [NADPH] small chain"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
UniPathway:UPA00634 InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0046872 EMBL:BX842584 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 GO:GO:0097054 TIGRFAMs:TIGR01317
KO:K00266 ProtClustDB:PRK12810 PIR:G70655 RefSeq:NP_218375.1
RefSeq:NP_338527.1 RefSeq:YP_006517358.1 HSSP:Q39243
ProteinModelPortal:P96219 SMR:P96219 PRIDE:P96219
EnsemblBacteria:EBMYCT00000002545 EnsemblBacteria:EBMYCT00000069396
GeneID:13317485 GeneID:886196 GeneID:922550 KEGG:mtc:MT3973
KEGG:mtu:Rv3858c KEGG:mtv:RVBD_3858c PATRIC:18130493
TubercuList:Rv3858c HOGENOM:HOG000031443 OMA:QIMPKEP Uniprot:P96219
Length = 488
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 37 KEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPTS 96
++A+RC+ C C CP I + + + A + + + N G +CP
Sbjct: 42 QQATRCMDCGIPFCHNGCPLGNLIPEWNDLVRRGRWRDAIERLHATNNFPDFTGRLCPAP 101
Query: 97 DLCMGGCNLYAAEEGPINIGGLQ-QFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C C L + P+ I ++ + + F D G Q RPP K+ +A++G GP
Sbjct: 102 --CEPACVL-GINQDPVTIKQIELEIIDKAF-DEGWVQPRPP-RKLT--GQTVAVVGSGP 154
Query: 156 ASLSCATFLSRMGYDDITIYEK 177
A L+ A L+R G+ +T++E+
Sbjct: 155 AGLAAAQQLTRAGHT-VTVFER 175
>CGD|CAL0000516 [details] [associations]
symbol:GLT1 species:5476 "Candida albicans" [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
InterPro:IPR000583 InterPro:IPR001327 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310
Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 EMBL:AACQ01000038
SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
GO:GO:0016040 TIGRFAMs:TIGR01317 RefSeq:XP_718760.1
ProteinModelPortal:Q5AAQ5 STRING:Q5AAQ5 GeneID:3639651
KEGG:cal:CaO19.13636 CGD:CAL0069988 Uniprot:Q5AAQ5
Length = 2126
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 38/143 (26%), Positives = 64/143 (44%)
Query: 38 EASRCLKCADAPCQKS--CPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
E +RC+ C C CP I + + + +Y A + + N G +CP
Sbjct: 1663 ETARCMDCGVPFCTSDTGCPISNVIPKWNELVFNDRWYDALQRLMMTNNFPEFTGRICPA 1722
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C G C L E P+NI ++ + + G + PP + +A+IG GP
Sbjct: 1723 P--CNGACVL-GINEDPVNIKSVECAIIDHGFEQGWIKPTPPAHRTG---KTVAVIGSGP 1776
Query: 156 ASLSCATFLSRMGYDDITIYEKN 178
A L+ A L++ G+ +T+YE++
Sbjct: 1777 AGLAAADQLNKAGHL-VTVYERS 1798
>UNIPROTKB|Q0JKD0 [details] [associations]
symbol:LOC_Os01g48960 "Glutamate synthase 1 [NADH],
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0006537 "glutamate biosynthetic process" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0060359 "response to ammonium ion"
evidence=IEP] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0009507 GO:GO:0009536
Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660 GO:GO:0051538
GO:GO:0006537 GO:GO:0048589 eggNOG:COG0493 Gene3D:1.10.1060.10
EMBL:AP008207 GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 GO:GO:0060359 SUPFAM:SSF46548 Gene3D:2.160.20.60
SUPFAM:SSF69336 EMBL:AB008845 RefSeq:NP_001043884.1
UniGene:Os.12738 ProteinModelPortal:Q0JKD0 STRING:Q0JKD0
PRIDE:Q0JKD0 GeneID:4324398 KEGG:osa:4324398 Gramene:Q0JKD0
KO:K00264 OMA:IEKHIAY ProtClustDB:CLSN2683760 GO:GO:0016040
GO:GO:0097054 TIGRFAMs:TIGR01317 Uniprot:Q0JKD0
Length = 2167
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 38 EASRCLKCADAPC-QKS----CPTQIDIKSFITSISHKNYYGAA-KAIFSDNPLGLTCGM 91
+++RC+ C C Q+S CP I F + H+N + A + N G
Sbjct: 1700 QSARCMDCGTPFCHQESSGAGCPLGNKIPEF-NELVHQNRWREALDRLLETNNFPEFTGR 1758
Query: 92 VCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALI 151
VCP C G C L E P++I ++ + + G RPP + K+A+I
Sbjct: 1759 VCPAP--CEGSCVL-GIIENPVSIKSIECAIIDKGFEEGWMVPRPPLQRTG---KKVAII 1812
Query: 152 GCGPASLSCATFLSRMGYDDITIYEK 177
G GPA L+ A L++MG+ +T++E+
Sbjct: 1813 GSGPAGLAAADQLNKMGHF-VTVFER 1837
>TIGR_CMR|CPS_0762 [details] [associations]
symbol:CPS_0762 "glutamate synthase, NADH/NADPH, small
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 GO:GO:0016639 Gene3D:1.10.1060.10 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 RefSeq:YP_267511.1 ProteinModelPortal:Q488K3
STRING:Q488K3 GeneID:3520782 KEGG:cps:CPS_0762 PATRIC:21464835
OMA:WAEGWVK BioCyc:CPSY167879:GI48-848-MONOMER Uniprot:Q488K3
Length = 496
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 45/152 (29%), Positives = 66/152 (43%)
Query: 37 KEASRCLKCADAPCQ--KS--------CPTQIDIKSFITSISHKNYYGAAKAIFSDNPLG 86
K+ASRC+ C CQ KS CP I + I + A + + N
Sbjct: 41 KQASRCMDCGVPFCQSAKSEFAPAVAGCPVNNVIPEWNDLIYRGRWKDAIELLHKTNNFP 100
Query: 87 LTCGMVCPTSDLCMGGCNLYAAEEGPINIG-GLQQFATEVFKDMGISQIRPPDAKVDFPD 145
G VCP C G C L P+ I ++ FK+ G +PP A+
Sbjct: 101 EFTGRVCPAP--CEGACVL-GINADPVAIKLHEKEIIDHAFKE-GWVVAQPPSARTG--- 153
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEK 177
+A+IG GPA L+ A L++ G+ +T+YE+
Sbjct: 154 KNVAVIGSGPAGLAAAAQLNKAGHM-VTVYER 184
>FB|FBgn0036663 [details] [associations]
symbol:CG9674 species:7227 "Drosophila melanogaster"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0016040 "glutamate synthase
(NADH) activity" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 InterPro:IPR016040 EMBL:AE014296
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0004355
GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 HSSP:P55038
UniGene:Dm.11253 GeneID:39878 KEGG:dme:Dmel_CG9674
FlyBase:FBgn0036663 ChiTaRS:CG9674 GenomeRNAi:39878 NextBio:815851
EMBL:AY094734 RefSeq:NP_648922.1 RefSeq:NP_788517.1 IntAct:Q9VVA4
MINT:MINT-312597 STRING:Q9VVA4 EnsemblMetazoa:FBtr0075341
EnsemblMetazoa:FBtr0075344 UCSC:CG9674-RA InParanoid:Q9VVA4
Uniprot:Q9VVA4
Length = 2114
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 38/150 (25%), Positives = 70/150 (46%)
Query: 33 RGALK-EASRCLKCADAPCQKS---CPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLT 88
R LK +A+RC++C CQ + CP I + + H + A + + N
Sbjct: 1656 RKNLKVQAARCMECGVPFCQSNSTGCPLGNIIPKWNDLVFHGEWQEALRQLLQTNNFPEF 1715
Query: 89 CGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKI 148
G VCP C G C L +E + I ++ + + G + P+ + ++
Sbjct: 1716 TGRVCPAP--CEGSCVLGISEPA-VTIKNIECAIIDHAFEQGWIKPEIPEVRTG---KRV 1769
Query: 149 ALIGCGPASLSCATFLSRMGYDDITIYEKN 178
A++G GP+ L+ + L+R G+ +T++E+N
Sbjct: 1770 AIVGSGPSGLAASQQLNRAGHF-VTVFERN 1798
>WB|WBGene00012326 [details] [associations]
symbol:W07E11.1 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0015930 "glutamate synthase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 GeneTree:ENSGT00500000044896
Gene3D:2.160.20.60 SUPFAM:SSF69336 EMBL:Z49868 GO:GO:0016040
TIGRFAMs:TIGR01317 OMA:PPAWQSN EMBL:Z49889 RefSeq:NP_509693.2
ProteinModelPortal:G5EF05 SMR:G5EF05 EnsemblMetazoa:W07E11.1
GeneID:181223 KEGG:cel:CELE_W07E11.1 CTD:181223 WormBase:W07E11.1
Uniprot:G5EF05
Length = 2175
Score = 119 (46.9 bits), Expect = 0.00085, P = 0.00085
Identities = 41/162 (25%), Positives = 69/162 (42%)
Query: 19 VNNFDDIKHTTLSERGALKEASRCLKCADAPCQ--KSCPTQIDIKSFITSISHKNYYGAA 76
+N++D++ ++A+RC+ C CQ CP I + + KN+ A
Sbjct: 1692 LNDWDEVYDFEAVRSNIREQAARCMDCGVPFCQGHSGCPLGNIIPKWNDFVFKKNWRQAL 1751
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
+ + N G VCP C G C L + I ++ + G ++P
Sbjct: 1752 EQLLQTNNFPEFTGRVCPAP--CEGACTLGIGSPA-VTIKSIECAIIDYAFMQG--WMKP 1806
Query: 137 PDAKVDFPDTK-IALIGCGPASLSCATFLSRMGYDDITIYEK 177
K F K IA+IG GP+ L A L ++G+ + +YE+
Sbjct: 1807 --CKPAFNTGKRIAIIGSGPSGLGAAAQLVKVGHT-VVVYER 1845
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 240 0.00093 113 3 11 22 0.43 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 604 (64 KB)
Total size of DFA: 190 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.86u 0.09s 19.95t Elapsed: 00:00:05
Total cpu time: 19.87u 0.09s 19.96t Elapsed: 00:00:05
Start: Thu Aug 15 15:17:34 2013 End: Thu Aug 15 15:17:39 2013