RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16201
(240 letters)
>d1gtea1 a.1.2.2 (A:2-183) Dihydropyrimidine dehydrogenase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 182
Score = 150 bits (379), Expect = 3e-46
Identities = 104/124 (83%), Positives = 109/124 (87%)
Query: 17 SLVNNFDDIKHTTLSERGALKEASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAA 76
L NNFDDIKHTTL ERGAL+EA RCLKCADAPCQKSCPT +DIKSFITSIS+KNYYGAA
Sbjct: 53 KLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAA 112
Query: 77 KAIFSDNPLGLTCGMVCPTSDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRP 136
K IFSDNPLGLTCGMVCPTSDLC+GGCNLYA EEG INIGGLQQFA+EVFK M I QIR
Sbjct: 113 KMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRN 172
Query: 137 PDAK 140
P
Sbjct: 173 PCLP 176
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 49.8 bits (117), Expect = 4e-08
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
KIAL+G GPAS+SCA+FL+R+GY DITI+EK Y
Sbjct: 6 KIALLGAGPASISCASFLARLGYSDITIFEKQEYVG 41
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 48.4 bits (114), Expect = 1e-07
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD-DITIYEKN 178
+I ++G GPA A L + + IYEK
Sbjct: 3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQ 35
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 47.6 bits (111), Expect = 4e-07
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
++ ++G G + +S A LS G D+ I E
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEAT 33
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 46.8 bits (109), Expect = 9e-07
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
++A+IG G + L+ A L G ++T++E
Sbjct: 3 RVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAE 33
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 45.5 bits (106), Expect = 2e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
I + G G LSCA L + G +T+ E ++
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS 35
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 44.7 bits (104), Expect = 3e-06
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD------DITIYEKN 178
IA++G GP++ A L + + + E
Sbjct: 4 YIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEML 41
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 44.7 bits (104), Expect = 4e-06
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+A++G G + L+ A L G D + E +
Sbjct: 2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSAR 34
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 43.3 bits (101), Expect = 8e-06
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
R + + +T + ++G G A LS A +S+ + I E++
Sbjct: 23 RYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS 66
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 43.8 bits (101), Expect = 9e-06
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
K+ +IG G + L+ A L G D+T+ E
Sbjct: 6 GKVIIIGSGVSGLAAARQLQSFGM-DVTLLEAR 37
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 42.8 bits (99), Expect = 1e-05
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ ++G G A LS A L+ G+ +T+ E +
Sbjct: 32 HVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASER 64
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 42.4 bits (98), Expect = 2e-05
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+IA++G + L+ A L G D+ +YE++
Sbjct: 5 DRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 37
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 42.2 bits (98), Expect = 2e-05
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
T++A+IG GP+ L L + G D I E+ T
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT 35
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 41.7 bits (97), Expect = 3e-05
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
KI ++G G + L+ G+ + I ++
Sbjct: 4 KILIVGAGFSGAVIGRQLAEKGH-QVHIIDQR 34
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 40.8 bits (94), Expect = 7e-05
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 147 KIALIGCGPASLSCATFLSRMGY-DDITIYEKN 178
KIA+IG GP+ L A L D +T++E+
Sbjct: 6 KIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 38
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 40.5 bits (93), Expect = 9e-05
Identities = 6/33 (18%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ ++G G + ++ A L G ++ + E
Sbjct: 2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARDR 33
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 39.9 bits (92), Expect = 1e-04
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 7/86 (8%)
Query: 96 SDLCMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGP 155
C+ + +++ + M + D F + + ++G G
Sbjct: 7 VTHCLSDIVK-KEDWSDFKFAPIRESTVS--RAMTSRYFKDLD---KFAVSDVIIVGAGS 60
Query: 156 ASLSCATFLSRMGYD-DITIYEKNTY 180
+ LS A +++ D + I E +
Sbjct: 61 SGLSAAYVIAKNRPDLKVCIIESSVA 86
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 38.9 bits (89), Expect = 2e-04
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 144 PDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVT 184
++ ++G G LS A L+R GY + I ++ + V+
Sbjct: 5 SQKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPEDVS 44
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 37.5 bits (85), Expect = 6e-04
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD-DITIYEKNTYDM 182
K+ ++G G + A ++ ++T+ E NT
Sbjct: 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYY 40
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 37.8 bits (86), Expect = 7e-04
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+I +IG G + A L G+++IT+ ++
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 37.1 bits (84), Expect = 7e-04
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD-DITIYEKNTY 180
K+ ++G L + D +I YEK +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 36.7 bits (84), Expect = 0.001
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
++G G CA L ++ + + EK +
Sbjct: 3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNH 35
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 36.4 bits (82), Expect = 0.002
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ ++G G + +S G + ++N Y
Sbjct: 9 VIVLGTGLTECILSGIMSVNGK-KVLHMDRNPY 40
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 36.0 bits (82), Expect = 0.002
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRH 198
++ +IG G LS A + + + V + R TT+
Sbjct: 2 RVVVIGAGVIGLSTALCIHERYHSVLQP------LDVKVYADRFTPFTTTDV 47
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 35.4 bits (80), Expect = 0.003
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IG GP+ L A + G ++ + +K
Sbjct: 5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKG 34
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 34.8 bits (79), Expect = 0.004
Identities = 7/46 (15%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRI 190
+K+ ++G GPA + A + +R + + +
Sbjct: 5 HSKLLILGSGPAGYTAAVYAARANL-QPVLITGMEKGGQLTTTTEV 49
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 35.2 bits (80), Expect = 0.004
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+PP+ + + ++G G + L L +G + + E
Sbjct: 3 QPPE------EVDVLVVGAGFSGLYALYRLRELGR-SVHVIETA 39
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 34.9 bits (79), Expect = 0.006
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
++ +IG G A L CA L+++G +T+++
Sbjct: 5 SENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNG 36
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 33.9 bits (76), Expect = 0.012
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 9/49 (18%)
Query: 135 RPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYD----DITIYEKNT 179
+ ++ D + ++G GPA L A LS + I +K +
Sbjct: 2 KYSESYCD-----VLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 33.4 bits (75), Expect = 0.012
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
+T++ ++G GPA+ + A + +R + D+
Sbjct: 5 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI 42
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 32.8 bits (73), Expect = 0.023
Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDD--ITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQ 204
+ ++G G AS+S L + GY + ++ + +
Sbjct: 5 PVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDC 64
Query: 205 GSFLNIELISEKTAYQWVYYSNCKVLSNTRTEFLNK 240
+E + TA + ++ LS+ RT
Sbjct: 65 KRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGT 100
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 32.9 bits (73), Expect = 0.025
Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+G G + LS G + +K +
Sbjct: 11 LGTGITECILSGLLSVDGK-KVLHIDKQDH 39
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 32.4 bits (72), Expect = 0.032
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNT 179
+IG G + A +L++ + ++E T
Sbjct: 7 AVVIGGGIIGSAIAYYLAKENK-NTALFESGT 37
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 32.4 bits (72), Expect = 0.034
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYD--DITIYEKNTY 180
T+I ++G GPA A + + +T+ + +
Sbjct: 2 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGI 38
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 31.2 bits (69), Expect = 0.057
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
+K+ ++G GP A LS+ ++T+ +K
Sbjct: 1 SKVVIVGNGPGGFELAKQLSQTY--EVTVIDKEPVPY 35
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 31.2 bits (69), Expect = 0.088
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 136 PPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
P VD + ++G G A S A + G + + EK
Sbjct: 12 APHDTVD-----VVVVGSGGAGFSAAISATDSGA-KVILIEKEPV 50
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 31.2 bits (69), Expect = 0.10
Identities = 4/31 (12%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ ++G G ++ L++ G + +
Sbjct: 6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF 35
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 31.1 bits (69), Expect = 0.11
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 132 SQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+Q + A V T + +IG G A L+ A G + + EK
Sbjct: 11 AQDKAIAAGVK-ETTDVVIIGSGGAGLAAAVSARDAGA-KVILLEKEPI 57
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 30.5 bits (67), Expect = 0.13
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEK 177
+ ++G GPA + A + +R G + E+
Sbjct: 4 VLIVGSGPAGAAAAIYSARKGIRTGLMGER 33
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 30.6 bits (68), Expect = 0.13
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+T+ ++G GP A +++G +TI EK
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQLG-QKVTIVEKGNL 37
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 30.6 bits (68), Expect = 0.13
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IG GPA A +++G+ + EK
Sbjct: 8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKR 37
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 30.4 bits (67), Expect = 0.14
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
T + +IG GP A ++G + E
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQAL 39
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 30.7 bits (68), Expect = 0.14
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 120 QFATEVFKDMGISQIRPPDAKVDFPDTK---IALIGCGPASLSCATFLSRMGYDDITIYE 176
Q+AT + + + VD D + IG G A + +L MG I +
Sbjct: 14 QWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVD 72
Query: 177 KNTYDMVTNV 186
+ + +
Sbjct: 73 RWPFLGGSCP 82
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 30.6 bits (68), Expect = 0.17
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYD-----DITIYEKNTY 180
+ + ++G GPA LS AT L ++ + + EK +
Sbjct: 32 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 29.7 bits (66), Expect = 0.18
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 144 PDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
P KI L+G G AT + + D+ +++
Sbjct: 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 36
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 29.6 bits (65), Expect = 0.26
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD-DITIYEKNTY 180
LIG G A+ + A + + I ++
Sbjct: 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 40
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 29.5 bits (65), Expect = 0.26
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ ++G GP S A + G + I E+
Sbjct: 9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERY 38
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 29.9 bits (66), Expect = 0.26
Identities = 6/35 (17%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 146 TKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
T++ ++G G A + + + G ++ + +K +
Sbjct: 20 TQVLVVGAGSAGFNASLAAKKAGA-NVILVDKAPF 53
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC
{Neisseria meningitidis, serogroup B [TaxId: 487]}
Length = 152
Score = 29.1 bits (64), Expect = 0.30
Identities = 13/89 (14%), Positives = 29/89 (32%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQGS 206
+ +G G + + A L + G I I + V+ + + +
Sbjct: 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVL 61
Query: 207 FLNIELISEKTAYQWVYYSNCKVLSNTRT 235
L ++ + A + + + VLS
Sbjct: 62 ILAVKPQDMEAACKNIRTNGALVLSVAAG 90
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate
ligase MurD {Escherichia coli [TaxId: 562]}
Length = 93
Score = 28.1 bits (62), Expect = 0.36
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 142 DFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK 177
D+ + +IG G LSC F G + +
Sbjct: 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTR 37
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase,
middle domain {Escherichia coli [TaxId: 562]}
Length = 179
Score = 29.0 bits (64), Expect = 0.36
Identities = 9/32 (28%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+A++G GPA L+ A + G+ +T+++ +
Sbjct: 45 NLAVVGAGPAGLAFAINAAARGH-QVTLFDAH 75
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 29.0 bits (64), Expect = 0.39
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ + +IG GP A +++G+ T EK
Sbjct: 3 ENDVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR 35
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 162
Score = 28.7 bits (63), Expect = 0.47
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 144 PDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
K+A+IGCG A +LS+ G
Sbjct: 28 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIA 60
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 28.4 bits (62), Expect = 0.60
Identities = 5/33 (15%), Positives = 9/33 (27%), Gaps = 1/33 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
IG G ++ + G + E
Sbjct: 5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAKEL 36
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 28.3 bits (62), Expect = 0.62
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNTYD-MVTNVSPRIVKGTTSRHLYGPEQGS 206
+IG G L+ A + +G + E + NV K + ++
Sbjct: 6 YLVIGGGSGGLASARRAAELGA-RAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD 64
Query: 207 FLNIELISEKTAYQWVYYSNCK 228
+ S + + W +
Sbjct: 65 HADYGFPSCEGKFNWRVIKEKR 86
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 28.7 bits (63), Expect = 0.70
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
K F D + +GCG LS F ++ G + + +
Sbjct: 33 NKDLFKDKIVLDVGCGTGILSM--FAAKHGAKHVIGVDMS 70
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 28.1 bits (61), Expect = 0.78
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IG GP A +++G + EK
Sbjct: 6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY 35
>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 235
Score = 28.2 bits (61), Expect = 0.82
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 114 NIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDIT 173
N GL+ FA ++ + P VDF ++ +IG G + + + +++ +
Sbjct: 6 NFPGLKDFAGNLYH----TG-NWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFV 60
Query: 174 IYEKNTYDMVTNVSPRIVKGTTSRHLYGPEQ 204
+ + +P + E
Sbjct: 61 FQRTPHFAVPARNAPLDPEFLADLKKRYAEF 91
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 27.8 bits (60), Expect = 0.99
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD 170
+ ++G G A + A L G++
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASGWE 28
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 27.7 bits (60), Expect = 1.1
Identities = 7/33 (21%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ +IG G ++ A +R + + EK+
Sbjct: 4 LIVIGGGSGGMAAARRAARHNA-KVALVEKSRL 35
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein
HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 27.6 bits (60), Expect = 1.1
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 144 PDTKIALIGCGPASLSCATFLSRMGYDDITIY 175
+ K+ + G G + + G++ + IY
Sbjct: 16 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIY 47
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 27.2 bits (59), Expect = 1.4
Identities = 4/31 (12%), Positives = 11/31 (35%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IG G L + + + + +
Sbjct: 6 LVVIGAGSGGLEAGWNAASLHKKRVAVIDLQ 36
>d1y5ib1 d.58.1.5 (B:1-509) Respiratory nitrate reductase 1 beta
chain {Escherichia coli [TaxId: 562]}
Length = 509
Score = 27.8 bits (61), Expect = 1.5
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 42 CLKCADAPCQKSCPTQIDIKSFITSI 67
C C + C +CP+ K I
Sbjct: 184 CEHCLNPACVATCPSGAIYKREEDGI 209
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain
3 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 153
Score = 27.0 bits (59), Expect = 1.6
Identities = 7/45 (15%), Positives = 17/45 (37%)
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
+ + + ++G G + CAT R G + + + +
Sbjct: 38 HSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN 82
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 27.2 bits (59), Expect = 1.7
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 134 IRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYD---DITIYEKNT 179
+ + + +T I +IG G + A + +T+ EK
Sbjct: 10 YKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 58
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 26.6 bits (58), Expect = 1.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
KI++IG G + A +L+ DI + +
Sbjct: 3 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 34
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 26.9 bits (58), Expect = 1.8
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKN 178
+ +IG G L A + + + + +
Sbjct: 6 LVVIGAGSGGLEAAWNAATLYKKRVAVIDVQ 36
>d7fd1a_ d.58.1.2 (A:) Ferredoxin {Azotobacter vinelandii [TaxId:
354]}
Length = 106
Score = 26.2 bits (57), Expect = 1.9
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 39 ASRCLKCADAPCQKSCPTQ 57
C+KC C + CP
Sbjct: 5 TDNCIKCKYTDCVEVCPVD 23
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId:
9606]}
Length = 426
Score = 27.0 bits (59), Expect = 2.0
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYD 181
K+ +IG G L+ G+ I + + +T D
Sbjct: 37 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTID 73
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 27.0 bits (58), Expect = 2.0
Identities = 7/29 (24%), Positives = 9/29 (31%), Gaps = 1/29 (3%)
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEKNT 179
IG G A L A + G +
Sbjct: 11 IGGGLAGLRAAVATQQKGL-STIVLSLIP 38
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 26.5 bits (58), Expect = 2.1
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 127 KDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMGYDD----ITIYEKNTYDM 182
K+ I+ + +A V P+ KI ++G G ++CA + D + + E
Sbjct: 4 KEKLIAPVAEEEATV--PNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGE 61
Query: 183 VTNVS 187
+ ++
Sbjct: 62 MMDLQ 66
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 26.8 bits (58), Expect = 2.1
Identities = 6/32 (18%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
A++G G + A +L+ G + ++ +
Sbjct: 3 TYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 33
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 26.2 bits (57), Expect = 2.6
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
K+A+IG G + + D+ +Y+
Sbjct: 9 KVAMIGSGMIGGTMGYLCALRELADVVLYDVV 40
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 26.5 bits (57), Expect = 2.8
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYD-DITIYEKNT 179
+A++G G A L A ++ + I + K
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40
>d1bc6a_ d.58.1.2 (A:) Ferredoxin {Bacillus schlegelii [TaxId:
1484]}
Length = 77
Score = 25.0 bits (54), Expect = 3.4
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 39 ASRCLKCADAPCQKSCPTQIDIK 61
C+ DA C + CP +
Sbjct: 5 TEPCIGTKDASCVEVCPVDCIHE 27
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 26.2 bits (56), Expect = 3.4
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 148 IALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ +IG G L+ A ++ + + + T
Sbjct: 6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDFVTP 37
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 26.4 bits (57), Expect = 3.4
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 151 IGCGPASLSCATFLSRMGYDDITIYEK 177
IG G A + A +S+ G + K
Sbjct: 13 IGAGGAGMRAALQISQSGQ-TCALLSK 38
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein
MoeB {Escherichia coli [TaxId: 562]}
Length = 247
Score = 26.1 bits (56), Expect = 3.5
Identities = 7/38 (18%), Positives = 22/38 (57%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
D+++ ++G G + + +L+ G ++T+ + +T +
Sbjct: 30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSL 67
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 25.8 bits (55), Expect = 4.0
Identities = 5/36 (13%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
+ ++G G + L+ G +T+ +
Sbjct: 4 SVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESA 38
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase,
middle domain {Methylophilus methylotrophus, w3a1
[TaxId: 17]}
Length = 233
Score = 25.9 bits (55), Expect = 4.0
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 5/76 (6%)
Query: 99 CMGGCNLYAAEEGPINIGGLQQFATEVFKDMGISQIRPPDAKVDFPDTKIALIGCGPASL 158
C + + P+ Q G + K + ++G GP+
Sbjct: 8 CNVCISRWEIGGPPM--ICTQNATAGEEYRRGWHPEKFRQTKNK---DSVLIVGAGPSGS 62
Query: 159 SCATFLSRMGYDDITI 174
A L GY
Sbjct: 63 EAARVLMESGYTVHLT 78
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 25.8 bits (56), Expect = 4.2
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 126 FKDMGISQIRPPDAKVDFPDTKIALIGCGPASLSCATFLSRMG-YDDITIYEKN 178
K+ I + P D KI ++G G ++CA + G D++ + + +
Sbjct: 3 VKEQLIQNLVPEDKL---SRCKITVVGVGDVGMACAISILLKGLADELALVDAD 53
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 25.7 bits (55), Expect = 4.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 147 KIALIGCGPASLSCATFLSRMGYD 170
KI ++GCG T L + G++
Sbjct: 2 KITVLGCGALGQLWLTALCKQGHE 25
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 25.6 bits (55), Expect = 4.7
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIY 175
++ IG G + + A+ L G + +T
Sbjct: 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSL 30
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 25.8 bits (56), Expect = 5.4
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Query: 151 IGCGPASLSCATFLSRMGYDD--ITIYEKNTYDMVTNVSPRIVKGTTSRHLYGPE 203
+G G + A +L++ G +T P G+ Y P+
Sbjct: 8 VGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPK 62
>d1h98a_ d.58.1.2 (A:) Ferredoxin {Thermus thermophilus [TaxId:
274]}
Length = 77
Score = 24.3 bits (52), Expect = 5.4
Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 10/57 (17%)
Query: 39 ASRCLKCADAPCQKSCPTQIDIKSFITSISHKNYYGAAKAIFSDNPLGLTCGMVCPT 95
C+ D C + CP + I + Y + I C CP
Sbjct: 5 CEPCIGVKDQSCVEVCPVE-----CIYDGGDQFYIHPEECIDCGA-----CVPACPV 51
>d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 149
Score = 25.2 bits (54), Expect = 5.7
Identities = 4/16 (25%), Positives = 5/16 (31%)
Query: 42 CLKCADAPCQKSCPTQ 57
C C+ CP
Sbjct: 12 CKALERTACEYICPND 27
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase
{Salmonella typhimurium [TaxId: 90371]}
Length = 161
Score = 25.1 bits (54), Expect = 6.0
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKNTYDM 182
K+ IG G + L + GY + + ++N +
Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAI 36
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 25.3 bits (54), Expect = 6.3
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 147 KIALIGCGPASLSCATFLSRMGYDDITIYEKN 178
KI + G L C MGY + +
Sbjct: 4 KIYIYGASGHGLVCEDVAKNMGYKECIFLDDF 35
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 25.5 bits (55), Expect = 6.4
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTY 180
+ F D + +G G L F ++ G + E ++
Sbjct: 27 HNRHLFKDKVVLDVGSGTGILCM--FAAKAGARKVIGIECSSI 67
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme)
{Thermotoga maritima [TaxId: 2336]}
Length = 222
Score = 25.0 bits (54), Expect = 7.9
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 139 AKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYEK 177
+ + K+ + G G A + FL +G ++ ++
Sbjct: 20 TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDR 58
>d2pbza2 d.142.1.9 (A:100-312) 5-formaminoimidazole-4-carboxamide
ribonucleotide synthetase PurP {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 213
Score = 25.1 bits (55), Expect = 7.9
Identities = 5/32 (15%), Positives = 9/32 (28%), Gaps = 9/32 (28%)
Query: 170 DDITIYEKNTYDMVTNVSPRIVKGTTSRHLYG 201
++ RI G+ + H Y
Sbjct: 159 GSFKAIG---------IASRIDGGSNADHWYS 181
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 25.2 bits (54), Expect = 8.1
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 138 DAKVDFPDTKIALIGCGPASLSCATFLSRMGYDDITIYE 176
F D + +GCG LS F ++ G + +
Sbjct: 29 QNPHIFKDKVVLDVGCGTGILSM--FAAKAGAKKVLGVD 65
>d3c7bb1 d.58.1.5 (B:197-261) DsrB insert domain {Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 65
Score = 23.4 bits (50), Expect = 9.3
Identities = 4/15 (26%), Positives = 5/15 (33%)
Query: 42 CLKCADAPCQKSCPT 56
C +CPT
Sbjct: 12 RKTCEIPSTVAACPT 26
>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding
protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 529
Score = 24.9 bits (54), Expect = 9.5
Identities = 7/37 (18%), Positives = 9/37 (24%)
Query: 145 DTKIALIGCGPASLSCATFLSRMGYDDITIYEKNTYD 181
+ LI L G TI + N
Sbjct: 25 SAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVS 61
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.409
Gapped
Lambda K H
0.267 0.0528 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 877,580
Number of extensions: 38922
Number of successful extensions: 210
Number of sequences better than 10.0: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 104
Length of query: 240
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 157
Effective length of database: 1,268,006
Effective search space: 199076942
Effective search space used: 199076942
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.9 bits)