Query psy16202
Match_columns 218
No_of_seqs 205 out of 1591
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 23:25:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16202.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16202hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1265|consensus 100.0 2E-57 4.3E-62 415.2 17.8 204 15-218 155-358 (1189)
2 KOG0169|consensus 100.0 8.1E-48 1.7E-52 351.0 15.9 195 8-218 133-333 (746)
3 PLN02952 phosphoinositide phos 100.0 3E-41 6.5E-46 308.0 14.0 147 61-218 13-167 (599)
4 PLN02228 Phosphoinositide phos 100.0 8E-41 1.7E-45 303.6 12.2 129 79-218 22-150 (567)
5 KOG1264|consensus 100.0 2.3E-40 5E-45 301.5 12.3 199 5-218 138-353 (1267)
6 PLN02222 phosphoinositide phos 100.0 3.6E-40 7.9E-45 300.0 10.1 136 67-218 12-147 (581)
7 PLN02230 phosphoinositide phos 100.0 2.3E-39 5.1E-44 295.2 11.7 130 79-218 27-159 (598)
8 PLN02223 phosphoinositide phos 100.0 2.8E-38 6E-43 283.7 11.5 129 79-218 14-151 (537)
9 KOG0027|consensus 99.8 4.5E-17 9.7E-22 126.7 15.2 129 11-160 11-150 (151)
10 COG5126 FRQ1 Ca2+-binding prot 99.7 1.1E-16 2.3E-21 124.4 14.9 134 6-161 16-158 (160)
11 PF09279 EF-hand_like: Phospho 99.7 1.5E-17 3.2E-22 116.7 7.3 83 82-173 1-83 (83)
12 smart00148 PLCXc Phospholipase 99.6 1.2E-16 2.6E-21 122.1 3.1 45 174-218 1-45 (135)
13 PTZ00183 centrin; Provisional 99.6 2.9E-13 6.2E-18 104.8 15.7 124 15-159 24-154 (158)
14 KOG0028|consensus 99.6 9.3E-14 2E-18 106.5 12.4 124 15-159 40-170 (172)
15 PTZ00184 calmodulin; Provision 99.6 2.8E-13 6.2E-18 103.5 15.3 124 15-159 18-148 (149)
16 KOG0031|consensus 99.5 2E-12 4.4E-17 98.6 13.8 122 12-158 33-164 (171)
17 KOG0030|consensus 99.4 1.6E-12 3.6E-17 97.5 11.3 129 11-159 14-151 (152)
18 KOG0037|consensus 99.4 7.5E-12 1.6E-16 100.7 14.2 127 7-158 57-187 (221)
19 KOG0036|consensus 99.2 2.2E-10 4.8E-15 99.8 13.7 129 8-159 14-146 (463)
20 KOG0034|consensus 99.1 5.8E-09 1.3E-13 83.7 13.4 129 13-160 38-176 (187)
21 KOG0044|consensus 98.9 3E-08 6.5E-13 79.8 11.5 139 10-162 29-178 (193)
22 cd05022 S-100A13 S-100A13: S-1 98.7 3.3E-08 7.1E-13 70.1 6.7 65 82-159 9-75 (89)
23 PLN02964 phosphatidylserine de 98.7 1.6E-07 3.5E-12 87.9 11.6 89 14-110 149-244 (644)
24 PTZ00183 centrin; Provisional 98.7 3.2E-07 7E-12 70.7 11.0 92 11-109 56-154 (158)
25 PF13499 EF-hand_7: EF-hand do 98.7 9.8E-08 2.1E-12 63.3 6.6 65 83-157 2-66 (66)
26 PF13499 EF-hand_7: EF-hand do 98.6 7.1E-08 1.5E-12 64.0 5.5 58 10-74 2-66 (66)
27 cd05029 S-100A6 S-100A6: S-100 98.6 1.8E-07 3.9E-12 66.2 7.4 65 82-159 11-79 (88)
28 cd05027 S-100B S-100B: S-100B 98.6 2.2E-07 4.8E-12 65.7 7.4 64 82-159 9-79 (88)
29 PTZ00184 calmodulin; Provision 98.5 1.5E-06 3.1E-11 66.1 11.2 99 41-159 11-112 (149)
30 cd05026 S-100Z S-100Z: S-100Z 98.5 7.6E-07 1.7E-11 63.6 7.6 69 82-159 11-81 (93)
31 KOG4223|consensus 98.4 2.1E-06 4.6E-11 73.2 10.3 117 18-155 173-301 (325)
32 KOG0044|consensus 98.4 1.2E-06 2.7E-11 70.4 8.2 98 6-110 62-176 (193)
33 cd05025 S-100A1 S-100A1: S-100 98.4 1.2E-06 2.6E-11 62.3 7.3 70 81-159 9-80 (92)
34 cd05026 S-100Z S-100Z: S-100Z 98.4 1.9E-06 4.1E-11 61.5 8.2 58 14-78 16-83 (93)
35 KOG0027|consensus 98.4 7.1E-06 1.5E-10 63.5 11.6 105 41-161 8-115 (151)
36 smart00027 EH Eps15 homology d 98.4 1.8E-06 3.9E-11 61.9 7.4 57 14-77 16-73 (96)
37 cd05022 S-100A13 S-100A13: S-1 98.4 1.8E-06 4E-11 61.1 7.3 59 13-78 13-77 (89)
38 cd05031 S-100A10_like S-100A10 98.4 1.8E-06 3.8E-11 61.7 7.2 70 81-159 8-79 (94)
39 cd00252 SPARC_EC SPARC_EC; ext 98.4 1.8E-06 3.8E-11 64.2 7.3 59 41-107 48-106 (116)
40 smart00027 EH Eps15 homology d 98.3 2.5E-06 5.3E-11 61.1 7.5 63 81-159 10-72 (96)
41 KOG0037|consensus 98.3 9.6E-06 2.1E-10 65.7 11.4 121 11-159 97-220 (221)
42 KOG0038|consensus 98.3 3.2E-06 7E-11 64.4 8.2 117 24-159 55-177 (189)
43 cd00052 EH Eps15 homology doma 98.3 2.7E-06 5.8E-11 56.1 6.9 56 14-76 5-61 (67)
44 cd05025 S-100A1 S-100A1: S-100 98.3 3.1E-06 6.7E-11 60.1 7.5 58 13-77 14-81 (92)
45 cd05031 S-100A10_like S-100A10 98.3 3E-06 6.5E-11 60.5 7.3 57 13-76 13-79 (94)
46 cd00052 EH Eps15 homology doma 98.3 3.7E-06 8E-11 55.5 7.2 59 84-158 2-60 (67)
47 COG5126 FRQ1 Ca2+-binding prot 98.3 1.7E-05 3.6E-10 62.0 11.2 102 41-163 20-124 (160)
48 cd05027 S-100B S-100B: S-100B 98.3 4.7E-06 1E-10 58.9 7.3 56 15-77 15-80 (88)
49 cd05023 S-100A11 S-100A11: S-1 98.3 5.2E-06 1.1E-10 58.8 7.4 56 15-77 17-81 (89)
50 cd05023 S-100A11 S-100A11: S-1 98.2 6E-06 1.3E-10 58.5 7.5 69 82-159 10-80 (89)
51 cd00213 S-100 S-100: S-100 dom 98.2 5.5E-06 1.2E-10 58.2 7.2 70 81-159 8-79 (88)
52 cd05029 S-100A6 S-100A6: S-100 98.2 9.3E-06 2E-10 57.4 8.2 59 12-77 14-80 (88)
53 cd00051 EFh EF-hand, calcium b 98.2 7.9E-06 1.7E-10 51.9 7.2 61 83-157 2-62 (63)
54 KOG4223|consensus 98.2 8.5E-06 1.8E-10 69.5 8.9 134 9-162 78-231 (325)
55 cd05030 calgranulins Calgranul 98.2 5.9E-06 1.3E-10 58.3 6.5 65 82-159 9-79 (88)
56 PF13833 EF-hand_8: EF-hand do 98.1 5.8E-06 1.2E-10 52.6 5.2 51 95-158 2-52 (54)
57 KOG0028|consensus 98.1 3.2E-05 7E-10 59.8 9.1 87 16-109 77-170 (172)
58 PLN02964 phosphatidylserine de 98.1 4E-05 8.7E-10 72.0 11.6 96 41-161 143-245 (644)
59 PF14658 EF-hand_9: EF-hand do 98.1 1.3E-05 2.8E-10 53.2 5.8 61 85-158 2-63 (66)
60 KOG2643|consensus 98.0 3.3E-05 7.2E-10 68.3 9.3 122 16-156 241-381 (489)
61 cd00213 S-100 S-100: S-100 dom 98.0 5.2E-05 1.1E-09 53.1 8.1 57 14-77 14-80 (88)
62 KOG2562|consensus 97.9 6.1E-05 1.3E-09 67.1 9.0 129 16-155 286-420 (493)
63 cd00051 EFh EF-hand, calcium b 97.9 7.7E-05 1.7E-09 47.2 7.2 50 58-107 10-62 (63)
64 PF14788 EF-hand_10: EF hand; 97.9 2.9E-05 6.2E-10 48.8 4.2 48 24-78 1-51 (51)
65 PF14658 EF-hand_9: EF-hand do 97.8 5.1E-05 1.1E-09 50.4 5.2 56 14-76 4-64 (66)
66 PF00036 EF-hand_1: EF hand; 97.8 3.2E-05 6.9E-10 43.0 3.6 28 82-109 1-28 (29)
67 cd00252 SPARC_EC SPARC_EC; ext 97.8 0.00011 2.4E-09 54.6 7.3 62 80-159 47-108 (116)
68 PF13833 EF-hand_8: EF-hand do 97.8 6.6E-05 1.4E-09 47.6 5.0 47 62-108 2-52 (54)
69 KOG0034|consensus 97.7 0.00032 6.9E-09 56.4 9.1 89 15-110 73-176 (187)
70 cd05024 S-100A10 S-100A10: A s 97.7 0.00027 5.9E-09 50.0 7.5 67 82-158 9-75 (91)
71 KOG4251|consensus 97.7 0.00022 4.7E-09 59.1 7.9 132 13-158 106-263 (362)
72 KOG0041|consensus 97.5 0.00033 7.1E-09 56.3 6.8 75 67-157 87-161 (244)
73 PF13405 EF-hand_6: EF-hand do 97.5 0.00018 3.9E-09 40.4 3.6 28 82-109 1-28 (31)
74 KOG2643|consensus 97.4 0.0011 2.4E-08 58.9 9.3 124 16-161 326-455 (489)
75 cd05024 S-100A10 S-100A10: A s 97.4 0.00053 1.1E-08 48.6 5.9 52 20-78 19-78 (91)
76 cd05030 calgranulins Calgranul 97.4 0.00044 9.5E-09 48.7 5.4 50 21-77 23-80 (88)
77 KOG0377|consensus 97.4 0.0029 6.4E-08 56.5 11.4 122 17-157 473-613 (631)
78 KOG0036|consensus 97.3 0.0011 2.3E-08 58.7 8.5 86 16-110 59-147 (463)
79 KOG0041|consensus 97.3 0.0025 5.4E-08 51.3 9.2 93 13-112 104-206 (244)
80 PF00036 EF-hand_1: EF hand; 97.3 0.00029 6.2E-09 39.1 2.8 24 12-35 4-27 (29)
81 PF13202 EF-hand_5: EF hand; P 97.2 0.00046 1E-08 36.9 3.2 25 83-107 1-25 (25)
82 KOG0040|consensus 97.0 0.0054 1.2E-07 61.8 10.0 124 13-158 2258-2397(2399)
83 KOG0031|consensus 96.7 0.0092 2E-07 46.1 7.1 46 81-136 32-77 (171)
84 KOG0751|consensus 96.4 0.022 4.8E-07 51.7 9.1 88 18-111 46-138 (694)
85 PF13202 EF-hand_5: EF hand; P 96.4 0.0029 6.3E-08 33.8 2.2 22 12-34 4-25 (25)
86 KOG2562|consensus 96.4 0.015 3.2E-07 52.3 7.7 111 18-162 235-346 (493)
87 PF13405 EF-hand_6: EF-hand do 96.3 0.0047 1E-07 34.5 2.7 24 12-35 4-27 (31)
88 PF10591 SPARC_Ca_bdg: Secrete 96.2 0.0024 5.2E-08 47.2 1.7 56 9-71 55-111 (113)
89 PF14788 EF-hand_10: EF hand; 96.2 0.013 2.9E-07 36.8 4.7 47 97-157 1-47 (51)
90 KOG0030|consensus 96.1 0.019 4.1E-07 43.7 5.9 67 81-159 11-77 (152)
91 PRK12309 transaldolase/EF-hand 96.1 0.022 4.9E-07 50.9 7.3 54 40-110 333-386 (391)
92 PRK12309 transaldolase/EF-hand 96.0 0.02 4.4E-07 51.1 6.9 49 11-76 337-385 (391)
93 smart00054 EFh EF-hand, calciu 95.8 0.016 3.4E-07 30.2 3.3 28 82-109 1-28 (29)
94 KOG0377|consensus 95.8 0.064 1.4E-06 48.2 8.7 86 19-111 510-617 (631)
95 KOG0040|consensus 95.7 0.016 3.4E-07 58.6 4.9 97 82-185 2254-2368(2399)
96 KOG4666|consensus 95.6 0.016 3.4E-07 50.1 4.0 120 22-164 241-364 (412)
97 KOG4251|consensus 95.5 0.097 2.1E-06 43.6 8.3 130 18-156 150-306 (362)
98 KOG0046|consensus 95.1 0.058 1.3E-06 49.3 6.3 60 13-80 21-89 (627)
99 KOG0751|consensus 95.1 0.1 2.2E-06 47.5 7.8 88 14-112 114-210 (694)
100 KOG4666|consensus 95.0 0.1 2.2E-06 45.1 7.3 94 11-111 262-361 (412)
101 PF12763 EF-hand_4: Cytoskelet 95.0 0.056 1.2E-06 39.3 4.9 87 82-190 11-97 (104)
102 PF09279 EF-hand_like: Phospho 94.6 0.07 1.5E-06 36.7 4.4 61 42-110 1-70 (83)
103 PF09069 EF-hand_3: EF-hand; 94.3 0.23 5E-06 35.1 6.5 77 82-165 4-81 (90)
104 PF12763 EF-hand_4: Cytoskelet 94.2 0.14 3.1E-06 37.2 5.5 49 20-75 21-70 (104)
105 KOG0046|consensus 93.4 0.24 5.3E-06 45.4 6.5 65 82-158 20-84 (627)
106 PF05517 p25-alpha: p25-alpha 92.9 0.43 9.4E-06 37.1 6.6 65 83-158 1-68 (154)
107 KOG4065|consensus 92.6 0.38 8.1E-06 35.6 5.4 76 80-155 65-141 (144)
108 smart00054 EFh EF-hand, calciu 92.3 0.21 4.5E-06 25.6 3.0 19 16-34 8-26 (29)
109 KOG0038|consensus 92.2 0.81 1.7E-05 35.3 7.0 89 13-108 76-176 (189)
110 KOG1707|consensus 91.6 1.7 3.7E-05 40.6 9.7 131 5-156 190-374 (625)
111 PF10591 SPARC_Ca_bdg: Secrete 91.1 0.47 1E-05 34.9 4.7 58 40-104 53-111 (113)
112 PLN02952 phosphoinositide phos 88.1 3.7 8.1E-05 38.9 9.1 82 20-109 12-110 (599)
113 KOG4065|consensus 87.6 2.1 4.6E-05 31.7 5.7 58 11-72 71-141 (144)
114 KOG0169|consensus 86.6 5.5 0.00012 38.4 9.3 93 41-158 136-231 (746)
115 PF01023 S_100: S-100/ICaBP ty 86.1 1.4 3.1E-05 26.7 3.5 30 82-111 7-38 (44)
116 KOG3555|consensus 85.7 1.3 2.7E-05 38.9 4.3 57 11-75 253-309 (434)
117 PF08726 EFhand_Ca_insen: Ca2+ 85.7 0.75 1.6E-05 30.8 2.4 64 79-157 4-67 (69)
118 PF05042 Caleosin: Caleosin re 85.2 0.95 2.1E-05 35.8 3.1 30 81-110 96-125 (174)
119 KOG0035|consensus 79.6 4.3 9.4E-05 39.9 5.8 89 12-105 751-848 (890)
120 KOG1955|consensus 73.8 8.5 0.00018 35.5 5.7 69 2-78 223-295 (737)
121 PF07862 Nif11: Nitrogen fixat 72.2 7.7 0.00017 23.7 3.7 36 98-133 1-36 (49)
122 PF00404 Dockerin_1: Dockerin 72.1 4 8.7E-05 20.7 1.9 15 18-32 1-15 (21)
123 PF12738 PTCB-BRCT: twin BRCT 70.4 2.6 5.6E-05 27.0 1.3 28 187-218 32-59 (63)
124 PF14513 DAG_kinase_N: Diacylg 65.2 11 0.00023 28.9 3.9 53 95-159 5-60 (138)
125 KOG2243|consensus 63.2 14 0.0003 38.6 5.0 64 84-162 4060-4123(5019)
126 KOG4578|consensus 63.1 3 6.5E-05 36.4 0.6 59 9-74 334-396 (421)
127 KOG0035|consensus 62.5 18 0.0004 35.8 5.8 73 81-162 747-819 (890)
128 PLN02228 Phosphoinositide phos 61.7 36 0.00079 32.2 7.4 62 39-109 22-92 (567)
129 KOG4286|consensus 61.0 20 0.00044 34.8 5.6 95 4-110 468-581 (966)
130 PF05383 La: La domain; Inter 59.6 12 0.00026 24.3 2.8 24 9-32 16-39 (61)
131 KOG0042|consensus 55.7 17 0.00036 34.3 4.0 65 85-163 597-661 (680)
132 PF14513 DAG_kinase_N: Diacylg 55.4 53 0.0011 25.1 6.2 67 63-139 6-81 (138)
133 cd07313 terB_like_2 tellurium 55.1 62 0.0013 22.6 6.3 73 21-102 12-93 (104)
134 PF11422 IBP39: Initiator bind 53.9 41 0.0009 26.7 5.5 94 82-192 20-138 (181)
135 KOG3866|consensus 48.6 43 0.00094 29.2 5.2 82 18-110 254-355 (442)
136 PLN02222 phosphoinositide phos 47.4 68 0.0015 30.5 6.8 61 40-109 24-90 (581)
137 PLN02230 phosphoinositide phos 47.2 80 0.0017 30.1 7.2 62 40-109 28-102 (598)
138 KOG2243|consensus 47.1 35 0.00075 35.9 4.9 52 17-75 4066-4119(5019)
139 PF05517 p25-alpha: p25-alpha 42.7 93 0.002 23.9 6.0 51 61-111 15-71 (154)
140 KOG0869|consensus 42.6 1.6E+02 0.0035 23.0 7.6 72 19-114 27-103 (168)
141 cd08029 LA_like_fungal La-moti 40.7 31 0.00068 23.4 2.6 42 8-49 18-61 (76)
142 PF09069 EF-hand_3: EF-hand; 38.4 1.4E+02 0.003 21.0 6.2 71 11-110 6-76 (90)
143 PRK09430 djlA Dna-J like membr 38.1 2.5E+02 0.0054 23.8 9.1 97 20-137 67-176 (267)
144 KOG1029|consensus 36.6 52 0.0011 32.3 4.2 67 2-75 187-256 (1118)
145 PHA02554 13 neck protein; Prov 36.2 10 0.00023 32.6 -0.3 18 173-190 148-165 (311)
146 COG2818 Tag 3-methyladenine DN 35.0 39 0.00085 27.1 2.7 119 77-217 51-182 (188)
147 PF08671 SinI: Anti-repressor 34.9 63 0.0014 17.9 2.8 26 127-159 3-28 (30)
148 PF11116 DUF2624: Protein of u 34.0 1.6E+02 0.0035 20.5 6.5 67 64-137 14-83 (85)
149 PF12174 RST: RCD1-SRO-TAF4 (R 33.4 1.2E+02 0.0025 20.3 4.4 53 62-114 6-58 (70)
150 PF08485 Polysacc_syn_2C: Poly 33.3 40 0.00087 20.9 2.0 18 187-212 25-42 (48)
151 PF03255 ACCA: Acetyl co-enzym 33.1 25 0.00055 27.0 1.3 13 200-212 127-139 (145)
152 KOG0042|consensus 32.8 69 0.0015 30.4 4.3 55 16-77 601-658 (680)
153 KOG1265|consensus 32.8 2E+02 0.0044 28.9 7.5 83 20-109 195-299 (1189)
154 PF08784 RPA_C: Replication pr 31.3 1.2E+02 0.0026 21.2 4.6 40 7-50 50-89 (102)
155 KOG4301|consensus 30.4 1.4E+02 0.0031 26.4 5.6 95 58-162 120-218 (434)
156 KOG3555|consensus 29.9 1.7E+02 0.0036 26.1 5.9 97 10-116 214-316 (434)
157 PF07165 DUF1397: Protein of u 29.5 89 0.0019 25.5 4.1 48 62-111 45-92 (213)
158 KOG1955|consensus 29.4 1.1E+02 0.0024 28.5 5.0 61 81-157 231-291 (737)
159 KOG2725|consensus 28.6 71 0.0015 28.3 3.5 37 121-158 109-146 (411)
160 cd01256 PH_dynamin Dynamin ple 28.4 3.4 7.4E-05 29.7 -3.8 30 2-31 23-52 (110)
161 TIGR03333 salvage_mtnX 2-hydro 28.4 2.6E+02 0.0057 22.2 6.7 77 21-111 6-86 (214)
162 smart00715 LA Domain in the RN 28.0 35 0.00075 23.4 1.2 41 8-49 21-64 (80)
163 PF09447 Cnl2_NKP2: Cnl2/NKP2 27.7 64 0.0014 21.4 2.4 31 62-92 17-48 (67)
164 PRK06438 hypothetical protein; 27.6 32 0.0007 29.6 1.2 93 12-111 15-114 (292)
165 PF08414 NADPH_Ox: Respiratory 27.4 72 0.0016 22.9 2.8 36 15-50 34-70 (100)
166 PF06181 DUF989: Protein of un 26.5 19 0.00041 31.0 -0.4 11 184-194 222-232 (300)
167 PF00522 VPR: VPR/VPX protein; 26.4 21 0.00045 25.5 -0.1 23 195-217 54-86 (96)
168 PF11363 DUF3164: Protein of u 26.1 1.1E+02 0.0025 24.6 4.1 19 17-35 128-146 (195)
169 cd08028 LARP_3 La RNA-binding 25.8 75 0.0016 21.9 2.6 40 9-49 23-65 (82)
170 cd08033 LARP_6 La RNA-binding 25.7 76 0.0017 21.6 2.6 42 8-49 18-62 (77)
171 KOG1707|consensus 25.2 1.7E+02 0.0036 27.9 5.4 67 82-156 196-262 (625)
172 PRK03980 flap endonuclease-1; 25.2 3.9E+02 0.0084 22.9 7.5 60 81-153 227-291 (292)
173 TIGR03798 ocin_TIGR03798 bacte 25.1 1.4E+02 0.003 19.2 3.7 35 72-113 6-40 (64)
174 cd08032 LARP_7 La RNA-binding 24.7 43 0.00093 23.2 1.2 24 9-32 24-47 (82)
175 PF05042 Caleosin: Caleosin re 24.2 2.6E+02 0.0057 22.2 5.6 18 17-34 16-33 (174)
176 cd07323 LAM LA motif RNA-bindi 23.8 1.3E+02 0.0029 20.2 3.5 39 9-49 19-60 (75)
177 KOG4403|consensus 23.6 1.5E+02 0.0032 27.2 4.6 30 81-110 68-97 (575)
178 PF09441 Abp2: ARS binding pro 23.5 1.5E+02 0.0033 23.2 4.1 37 126-163 89-125 (175)
179 PF05184 SapB_1: Saposin-like 22.3 1.5E+02 0.0032 16.5 3.1 23 27-49 11-33 (39)
180 KOG0039|consensus 21.6 1.3E+02 0.0027 29.1 4.1 85 65-158 4-88 (646)
181 KOG1029|consensus 21.0 1.3E+02 0.0028 29.8 3.9 61 82-158 196-256 (1118)
182 PF08339 RTX_C: RTX C-terminal 20.5 1.2E+02 0.0027 23.3 3.1 65 60-137 27-91 (145)
183 PF11593 Med3: Mediator comple 20.5 2.6E+02 0.0057 25.0 5.5 50 23-78 6-56 (379)
No 1
>KOG1265|consensus
Probab=100.00 E-value=2e-57 Score=415.25 Aligned_cols=204 Identities=56% Similarity=0.951 Sum_probs=197.4
Q ss_pred hhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCC
Q psy16202 15 LGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQSITKGK 94 (218)
Q Consensus 15 ~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~ 94 (218)
.+...|..|+|+++.|.++|.++..++.|+..+..+|+|++|+|......++|+.|..+++.+|.|++|++||.++.+++
T Consensus 155 lkmqvn~~grip~knI~k~F~~~k~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcpR~eie~iF~ki~~~~ 234 (1189)
T KOG1265|consen 155 LKMQVNFEGRIPVKNIIKTFSADKKEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCPRPEIEEIFRKISGKK 234 (1189)
T ss_pred hhhcccccccccHHHHHHHhhcCCchhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCCchhHHHHHHHhccCC
Confidence 34568899999999999999999888999999999999999999999999999999999999999999999999999988
Q ss_pred CCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCCCCcccccccccc
Q psy16202 95 AETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDENAPVFLDRLDFYM 174 (218)
Q Consensus 95 ~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n~~~~~~~~~~~~ 174 (218)
..++|.++|.+||++.|++|++||+|||++++.++..||++|+|+.....+|+|+.+||++||++++|.|+.+++...++
T Consensus 235 kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~gdEn~i~a~~~l~l~~ 314 (1189)
T KOG1265|consen 235 KPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMGDENAIVALDKLDLVT 314 (1189)
T ss_pred CccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhCCccccccHHHHHhhh
Confidence 78999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred ccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 175 DMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 175 dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
||+||||||||||||||||||+||+|.||||||++||++|||||
T Consensus 315 dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCV 358 (1189)
T KOG1265|consen 315 DMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCV 358 (1189)
T ss_pred hhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceE
Confidence 99999999999999999999999999999999999999999998
No 2
>KOG0169|consensus
Probab=100.00 E-value=8.1e-48 Score=350.97 Aligned_cols=195 Identities=32% Similarity=0.495 Sum_probs=178.3
Q ss_pred HHHHHHHhhh---hcCCCCcccHHHHHHHhcCCC---cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCch
Q psy16202 8 QLLSWMRLGM---LVEAKGKVPVKVVSRTFASGK---TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRN 81 (218)
Q Consensus 8 ~~~~wl~~~f---d~d~~G~I~~~el~~~l~~~~---~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ 81 (218)
.+.+|+...| |+|.+|.++..++..++...+ ....++.+++++ +....+.+..++|.+++..+..++
T Consensus 133 ~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~-------~~~~~~k~~~~~~~~~~~~~~~rp 205 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKES-------DNSQTGKLEEEEFVKFRKELTKRP 205 (746)
T ss_pred hHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHH-------HhhccceehHHHHHHHHHhhccCc
Confidence 4577988766 789999999999999887643 456788889987 566788999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
++..+|..+..+ .++++.++|.+||..+|++.. ++.+.|++||++|++..+.+..+.+++++|.+||+|++
T Consensus 206 ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~--------~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~~ 276 (746)
T KOG0169|consen 206 EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDG--------ATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSPD 276 (746)
T ss_pred hHHHHHHHHhCC-CCccCHHHHHHHHHHhccccc--------ccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCcc
Confidence 999999999988 479999999999999998764 58899999999999987777778899999999999999
Q ss_pred CCCccccccccccccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 162 NAPVFLDRLDFYMDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 162 n~~~~~~~~~~~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
+++|+|.+..|+|||++|||||||+|||||||||+||+|+||+|+||+||++|||||
T Consensus 277 ~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~v 333 (746)
T KOG0169|consen 277 CNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCV 333 (746)
T ss_pred CCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEE
Confidence 999999999999999999999999999999999999999999999999999999997
No 3
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=3e-41 Score=308.03 Aligned_cols=147 Identities=22% Similarity=0.387 Sum_probs=125.1
Q ss_pred CCCCCCHHHHHHHHHHcC-----CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHH
Q psy16202 61 EPADFTFDKFYELYHKIC-----PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINT 135 (218)
Q Consensus 61 ~~g~l~f~eF~~~~~~l~-----~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~ 135 (218)
+.|.++|++|..|++.+. +|+||..+|..|..++ +.||+++|.+||+++|++.. .+.+++++|+++
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~--------~~~~~~~~i~~~ 83 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELD--------CTLAEAQRIVEE 83 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcC--------CCHHHHHHHHHH
Confidence 357999999998887664 5899999999998776 59999999999999999863 477888898876
Q ss_pred hcchh---hhhccCCcCHHHHHHHHcCCCCCCccccccccccccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHH
Q psy16202 136 YEQNE---EIRNEKSFSKDGLIRYLMSDENAPVFLDRLDFYMDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLL 212 (218)
Q Consensus 136 ~~~~~---~~~~~g~ls~~~F~~~L~s~~n~~~~~~~~~~~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~ 212 (218)
+.... .....+.+++++|..||+|++ +++|.+..|+|||++|||||||||||||||+|+||+|+||+|+|++||+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~F~~~l~s~~--~~~p~~~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~ 161 (599)
T PLN02952 84 VINRRHHVTRYTRHGLNLDDFFHFLLYDD--LNGPITPQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQ 161 (599)
T ss_pred HHhhccccccccccCcCHHHHHHHHcCcc--ccccccccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHH
Confidence 63210 111335699999999999876 4456666789999999999999999999999999999999999999999
Q ss_pred cCCccC
Q psy16202 213 AGCRFV 218 (218)
Q Consensus 213 ~GcRcv 218 (218)
+|||||
T Consensus 162 ~GcRcv 167 (599)
T PLN02952 162 RGVRVI 167 (599)
T ss_pred cCCcEE
Confidence 999997
No 4
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=8e-41 Score=303.61 Aligned_cols=129 Identities=27% Similarity=0.509 Sum_probs=116.2
Q ss_pred CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 79 PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 79 ~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
+++||..+|..|..+ +.|+.++|.+||+++|++.. .+.+.+.++|++|++....+..+.+++++|++||+
T Consensus 22 ~~~ei~~if~~~s~~--~~~t~~~~~~FL~~~Q~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~ 91 (567)
T PLN02228 22 PPVSIKRLFEAYSRN--GKMSFDELLRFVSEVQGERH--------AGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLF 91 (567)
T ss_pred CcHHHHHHHHHhcCC--CccCHHHHHHHHHHhcCCcc--------CCHHHHHHHHHHhccchhhcccCccCHHHHHHHhc
Confidence 688999999999865 48999999999999999753 36778999999999875555567899999999999
Q ss_pred CCCCCCccccccccccccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 159 SDENAPVFLDRLDFYMDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 159 s~~n~~~~~~~~~~~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
|++|++++ .+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||
T Consensus 92 s~~n~~~~-~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 150 (567)
T PLN02228 92 SDTNSPLP-MSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVI 150 (567)
T ss_pred CcccCCCC-ccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEE
Confidence 99998874 455789999999999999999999999999999999999999999999997
No 5
>KOG1264|consensus
Probab=100.00 E-value=2.3e-40 Score=301.50 Aligned_cols=199 Identities=27% Similarity=0.435 Sum_probs=155.6
Q ss_pred hhHHHHHHHHhhh---hcCCCCcccHHHHHHHhcCC----CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 5 LMLQLLSWMRLGM---LVEAKGKVPVKVVSRTFASG----KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 5 ~~~~~~~wl~~~f---d~d~~G~I~~~el~~~l~~~----~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
.+++.++|+|.++ |.+....|++++++..|... .+.+.+++.+.+. .-..+.|+|++|..+|..+
T Consensus 138 ~p~qI~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~ted--------~~~k~dlsf~~f~~ly~~l 209 (1267)
T KOG1264|consen 138 TPLQIERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTED--------GARKDDLSFEQFHLLYKKL 209 (1267)
T ss_pred ChHHHHHHHHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhHh--------hhccccccHHHHHHHHHHH
Confidence 4678899999875 44567779999999999874 3445666667664 3456789999999999876
Q ss_pred CC--chHHHHHHHH-HcCC-----CCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhh-hhccCCc
Q psy16202 78 CP--RNDIEELFQS-ITKG-----KAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEE-IRNEKSF 148 (218)
Q Consensus 78 ~~--r~ei~~iF~~-~d~~-----~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~-~~~~g~l 148 (218)
.- +.-+..-|.. +..+ ....++..+|++||..+|++.++.+ ...++++|..|-.+.. ......+
T Consensus 210 mfs~~~a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asd-------r~av~~~~r~F~~D~~re~~EPyl 282 (1267)
T KOG1264|consen 210 MFSQQKAILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASD-------RNAVREFMRKFIDDTMRETAEPYL 282 (1267)
T ss_pred hhccchhhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhH-------HHHHHHHHHHHHhhhhhhccCcce
Confidence 42 2222212211 1111 1247999999999999999876533 3467788888766532 2356789
Q ss_pred CHHHHHHHHcCCCCCCccccccccccc-cCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 149 SKDGLIRYLMSDENAPVFLDRLDFYMD-MDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 149 s~~~F~~~L~s~~n~~~~~~~~~~~~d-m~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
++++|+.||+|.+|+++++....|.+| |+.|||||||+||||||||||||.|+||.|+|++||+.|||||
T Consensus 283 ~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCI 353 (1267)
T KOG1264|consen 283 FVDEFVTFLFSRENSLWDSKYDAVDMDDMNNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCI 353 (1267)
T ss_pred eHHHHHHHHhhcccccccccccccchhhhcCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEE
Confidence 999999999999999999999888555 9999999999999999999999999999999999999999997
No 6
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=3.6e-40 Score=300.04 Aligned_cols=136 Identities=25% Similarity=0.480 Sum_probs=117.6
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccC
Q psy16202 67 FDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEK 146 (218)
Q Consensus 67 f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g 146 (218)
|.-+..++... .++||..+|..|.. + +.||.++|.+||+++|+++. .+.+.|++||++|+.. ...+
T Consensus 12 ~~~~~~~~~~~-~~~ei~~if~~~~~-~-~~mt~~~l~~FL~~~Q~~~~--------~~~~~~~~ii~~~~~~---~~~~ 77 (581)
T PLN02222 12 FRRRFRYTASE-APREIKTIFEKYSE-N-GVMTVDHLHRFLIDVQKQDK--------ATREDAQSIINSASSL---LHRN 77 (581)
T ss_pred eccccccccCC-CcHHHHHHHHHhcC-C-CCcCHHHHHHHHHHhcCCcc--------CCHHHHHHHHHhhhhh---hhcc
Confidence 44555555554 45699999999986 3 69999999999999999864 4788999999998532 2457
Q ss_pred CcCHHHHHHHHcCCCCCCccccccccccccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 147 SFSKDGLIRYLMSDENAPVFLDRLDFYMDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 147 ~ls~~~F~~~L~s~~n~~~~~~~~~~~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
.+++++|++||+|++|.++. +..|+|||++|||||||||||||||+|+||+|.||+|+|++||++|||||
T Consensus 78 ~~~~~gF~~yL~s~~n~~~~--~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcv 147 (581)
T PLN02222 78 GLHLDAFFKYLFGDNNPPLA--LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVI 147 (581)
T ss_pred CcCHHHHHHHhcCCCCCCCc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEE
Confidence 79999999999999998884 35689999999999999999999999999999999999999999999997
No 7
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=2.3e-39 Score=295.19 Aligned_cols=130 Identities=24% Similarity=0.380 Sum_probs=112.0
Q ss_pred CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhh---hhccCCcCHHHHHH
Q psy16202 79 PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEE---IRNEKSFSKDGLIR 155 (218)
Q Consensus 79 ~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~---~~~~g~ls~~~F~~ 155 (218)
+|+||..+|..|..++ +.||+++|.+||+++|++++. .+.+++..+|.++..... ..+.+.+++++|.+
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~ 98 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGE-------TSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNY 98 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCccc-------CCHHHHHHHHHHHHhhccccccccccccCHHHHHH
Confidence 5789999999998776 699999999999999976532 477889999988765421 12345799999999
Q ss_pred HHcCCCCCCccccccccccccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 156 YLMSDENAPVFLDRLDFYMDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 156 ~L~s~~n~~~~~~~~~~~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
||+|.++. +|.+..|+|||++|||||||||||||||+|+||+|.||+|+|++||++|||||
T Consensus 99 yL~s~~~~--~~~~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 159 (598)
T PLN02230 99 YLFSTDLN--PPIADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVV 159 (598)
T ss_pred HHcCcccC--CcccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEE
Confidence 99998743 45666789999999999999999999999999999999999999999999997
No 8
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=2.8e-38 Score=283.66 Aligned_cols=129 Identities=25% Similarity=0.341 Sum_probs=110.2
Q ss_pred CchHHHHHHHHHcCCCCCcccHHHHHHHH---HHhcCCccccccccccCCHHHHHHHHHHhcch----hhhhccCCcCHH
Q psy16202 79 PRNDIEELFQSITKGKAETINLDQFITFL---NEKQRDPRLNEILYPLYDEKRALEIINTYEQN----EEIRNEKSFSKD 151 (218)
Q Consensus 79 ~r~ei~~iF~~~d~~~~g~it~~ef~~FL---~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~----~~~~~~g~ls~~ 151 (218)
+.++|..+|..|..+ .|.|+++.+.+|| .++|++.. .+.++++.|++++.+. ...+..+.++++
T Consensus 14 ~p~~v~~~f~~~~~~-~~~m~~~~l~~fl~~l~~~q~e~~--------~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~ 84 (537)
T PLN02223 14 QPDLILNFFGNEFHG-YDDDMPELLPRFIELLDTEKDEDG--------AGLNAAEKIAAELKRRKCDILAFRNLRCLELD 84 (537)
T ss_pred CcHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHHhccccc--------CCHHHHHHHHHHHHhhcccchhhhhccccCHH
Confidence 457899999999744 4799999999999 99999864 4788899998877643 233445789999
Q ss_pred HHHHHHcCCCCCCcccccccc-ccccCCccccccccCCCcccccCCCCCCC-CcHHHHHHHHHcCCccC
Q psy16202 152 GLIRYLMSDENAPVFLDRLDF-YMDMDQPLAHYYINSSHNTYLSGRQFGGK-SSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 152 ~F~~~L~s~~n~~~~~~~~~~-~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~-ss~e~y~~aL~~GcRcv 218 (218)
||.+||+|+++++ |.+..| +|||++|||||||||||||||+|+||.|. ||+|+|++||++|||||
T Consensus 85 ~f~~~L~s~~~n~--~~~~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcv 151 (537)
T PLN02223 85 HLNEFLFSTELNP--PIGDQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVV 151 (537)
T ss_pred HHHHHhcCcccCC--ccccccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEE
Confidence 9999999998553 444456 99999999999999999999999999999 99999999999999997
No 9
>KOG0027|consensus
Probab=99.75 E-value=4.5e-17 Score=126.68 Aligned_cols=129 Identities=15% Similarity=0.265 Sum_probs=112.9
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC----Cc---
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC----PR--- 80 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~----~r--- 80 (218)
+-....||+|++|+|+.+|+..+|+. .+++.++..+++++ |.+++|.|+|++|..++.... ..
T Consensus 11 ~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~-------D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~ 83 (151)
T KOG0027|consen 11 KEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEI-------DLDGDGTIDFEEFLDLMEKLGEEKTDEEAS 83 (151)
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHh-------CCCCCCeEcHHHHHHHHHhhhccccccccc
Confidence 34556789999999999999999987 35789999999998 788999999999999987542 12
Q ss_pred -hHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 81 -NDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 81 -~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.++.++|+.||.+++|+||++||+.+|...+. + .+.+++..+|+.++.+ ++|.++|++|+..|..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~-~---------~~~~e~~~mi~~~d~d----~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLGE-K---------LTDEECKEMIREVDVD----GDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC-c---------CCHHHHHHHHHhcCCC----CCCeEeHHHHHHHHhc
Confidence 38999999999999999999999999999984 3 4889999999999987 8999999999998865
Q ss_pred C
Q psy16202 160 D 160 (218)
Q Consensus 160 ~ 160 (218)
.
T Consensus 150 ~ 150 (151)
T KOG0027|consen 150 K 150 (151)
T ss_pred C
Confidence 3
No 10
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.74 E-value=1.1e-16 Score=124.41 Aligned_cols=134 Identities=10% Similarity=0.214 Sum_probs=114.1
Q ss_pred hHHHHHH--HHhhhhcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC--
Q psy16202 6 MLQLLSW--MRLGMLVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC-- 78 (218)
Q Consensus 6 ~~~~~~w--l~~~fd~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~-- 78 (218)
+.+...| -...||.|++|.|+..+|.++|+. ..+++++.+++.++ |. +.+.++|++|+.++....
T Consensus 16 ~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~-------d~-~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 16 EEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEI-------DA-GNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred HHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhc-------cC-CCCccCHHHHHHHHHHHhcc
Confidence 3444445 334579999999999999999875 46789999999998 55 789999999999997633
Q ss_pred --CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHH
Q psy16202 79 --PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRY 156 (218)
Q Consensus 79 --~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~ 156 (218)
.+++|..+|+.||.|++|+|+..+|++.|+..+. . .++++++++++.++++ ++|.|++++|...
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge-~---------~~deev~~ll~~~d~d----~dG~i~~~eF~~~ 153 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGE-R---------LSDEEVEKLLKEYDED----GDGEIDYEEFKKL 153 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcc-c---------CCHHHHHHHHHhcCCC----CCceEeHHHHHHH
Confidence 3689999999999999999999999999998874 3 5899999999999998 8999999999998
Q ss_pred HcCCC
Q psy16202 157 LMSDE 161 (218)
Q Consensus 157 L~s~~ 161 (218)
++.+.
T Consensus 154 ~~~~~ 158 (160)
T COG5126 154 IKDSP 158 (160)
T ss_pred HhccC
Confidence 77643
No 11
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.72 E-value=1.5e-17 Score=116.69 Aligned_cols=83 Identities=33% Similarity=0.626 Sum_probs=73.5
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
||..||..|+. +.+.||+++|++||+++|+++. .+.++|.++|.+|+++...+..+.||++||++||+|++
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~--------~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPR--------LTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TT--------SSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhcccc--------CcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 68999999987 4579999999999999999865 48999999999999987777889999999999999999
Q ss_pred CCCccccccccc
Q psy16202 162 NAPVFLDRLDFY 173 (218)
Q Consensus 162 n~~~~~~~~~~~ 173 (218)
|++++|.|..||
T Consensus 72 N~~~~~~~~~Vy 83 (83)
T PF09279_consen 72 NSIFDPEHLQVY 83 (83)
T ss_dssp CBSS-HHHHSS-
T ss_pred CCCCChHhCCcC
Confidence 999999998875
No 12
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=99.63 E-value=1.2e-16 Score=122.11 Aligned_cols=45 Identities=64% Similarity=1.020 Sum_probs=44.0
Q ss_pred cccCCccccccccCCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 174 MDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 174 ~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
|||++|||||||++|||||++|+|+.|+++..+|+++|..||||+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~ 45 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCV 45 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEE
Confidence 699999999999999999999999999999999999999999986
No 13
>PTZ00183 centrin; Provisional
Probab=99.56 E-value=2.9e-13 Score=104.85 Aligned_cols=124 Identities=18% Similarity=0.302 Sum_probs=105.7
Q ss_pred hhhhcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC----CchHHHHHH
Q psy16202 15 LGMLVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC----PRNDIEELF 87 (218)
Q Consensus 15 ~~fd~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~----~r~ei~~iF 87 (218)
..+|.+++|.|+..|+..++.. ..+...+..+++.+ |.+++|.|+|++|..++.... ...+++.+|
T Consensus 24 ~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~-------d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 24 DLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADV-------DKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHh-------CCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3468999999999999998875 24567788999988 778899999999998876532 346799999
Q ss_pred HHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 88 QSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 88 ~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
+.+|.+++|.|+.++|..+|...+. + ++.+++.+++..++.+ ++|.|++++|..++.+
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~~~~-~---------l~~~~~~~~~~~~d~~----~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKELGE-T---------ITDEELQEMIDEADRN----GDGEISEEEFYRIMKK 154 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhCC-C---------CCHHHHHHHHHHhCCC----CCCcCcHHHHHHHHhc
Confidence 9999999999999999999998763 3 5889999999999887 7899999999998865
No 14
>KOG0028|consensus
Probab=99.55 E-value=9.3e-14 Score=106.49 Aligned_cols=124 Identities=14% Similarity=0.275 Sum_probs=107.4
Q ss_pred hhhhcCCCCcccHHHHHHHhcCC---CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH-c---CCchHHHHHH
Q psy16202 15 LGMLVEAKGKVPVKVVSRTFASG---KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK-I---CPRNDIEELF 87 (218)
Q Consensus 15 ~~fd~d~~G~I~~~el~~~l~~~---~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~-l---~~r~ei~~iF 87 (218)
..||.+++|+|+++||+-+++.. ..+.+|..++.+. |..+.|.|+|++|...+.. + -+.+||..+|
T Consensus 40 ~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~-------dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~af 112 (172)
T KOG0028|consen 40 ELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADV-------DKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAF 112 (172)
T ss_pred HhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhh-------hhccCceechHHHHHHHHHHHhccCcHHHHHHHH
Confidence 34689999999999998777763 4567899999988 7888999999999998754 2 2467999999
Q ss_pred HHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 88 QSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 88 ~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
+.+|.|++|.|+..+|++..+..+ +. +|++++.++|.+++.+ ++|.|+-++|+.+|.+
T Consensus 113 rl~D~D~~Gkis~~~lkrvakeLg-en---------ltD~El~eMIeEAd~d----~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 113 RLFDDDKTGKISQRNLKRVAKELG-EN---------LTDEELMEMIEEADRD----GDGEVNEEEFIRIMKK 170 (172)
T ss_pred HcccccCCCCcCHHHHHHHHHHhC-cc---------ccHHHHHHHHHHhccc----ccccccHHHHHHHHhc
Confidence 999999999999999999999997 44 6999999999999988 8899999999998764
No 15
>PTZ00184 calmodulin; Provisional
Probab=99.55 E-value=2.8e-13 Score=103.52 Aligned_cols=124 Identities=15% Similarity=0.260 Sum_probs=104.3
Q ss_pred hhhhcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC----CchHHHHHH
Q psy16202 15 LGMLVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC----PRNDIEELF 87 (218)
Q Consensus 15 ~~fd~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~----~r~ei~~iF 87 (218)
..+|.|++|.|+..|+..++.. ..+...+..+++.+ |.+++|.|+|++|..++.... ..+.+..+|
T Consensus 18 ~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-------d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV-------DADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhc-------CcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 3469999999999999988864 23556888899887 678889999999999876542 245689999
Q ss_pred HHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 88 QSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 88 ~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
+.||.+++|.|+.++|..+|...+.. ++.+++..++..++.+ ++|.|++++|+.++.+
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~----------~~~~~~~~~~~~~d~~----~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTNLGEK----------LTDEEVDEMIREADVD----GDGQINYEEFVKMMMS 148 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHHHCCC----------CCHHHHHHHHHhcCCC----CCCcCcHHHHHHHHhc
Confidence 99999999999999999999887532 4788899999999877 7899999999999876
No 16
>KOG0031|consensus
Probab=99.47 E-value=2e-12 Score=98.57 Aligned_cols=122 Identities=14% Similarity=0.233 Sum_probs=105.9
Q ss_pred HHHhhh---hcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH-cC---Cch
Q psy16202 12 WMRLGM---LVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK-IC---PRN 81 (218)
Q Consensus 12 wl~~~f---d~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~-l~---~r~ 81 (218)
-++..| |.|+||.|+..+|+.+|.+ ..++.+|..++++. +|.|+|..|+.++.. |+ +++
T Consensus 33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea-----------~gPINft~FLTmfGekL~gtdpe~ 101 (171)
T KOG0031|consen 33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA-----------PGPINFTVFLTMFGEKLNGTDPEE 101 (171)
T ss_pred HHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC-----------CCCeeHHHHHHHHHHHhcCCCHHH
Confidence 455554 8999999999999998876 35778999999986 678999999999975 43 356
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
.|..+|+.||.++.|.|..+.|++.|...+ +. ++++++.++.+.+.++ ..|.+++..|+..|.
T Consensus 102 ~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g-Dr---------~~~eEV~~m~r~~p~d----~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 102 VILNAFKTFDDEGSGKIDEDYLRELLTTMG-DR---------FTDEEVDEMYREAPID----KKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHhcCccCCCccCHHHHHHHHHHhc-cc---------CCHHHHHHHHHhCCcc----cCCceeHHHHHHHHH
Confidence 789999999999999999999999999954 65 7999999999999887 689999999999887
No 17
>KOG0030|consensus
Probab=99.44 E-value=1.6e-12 Score=97.47 Aligned_cols=129 Identities=16% Similarity=0.225 Sum_probs=104.9
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC------Cch
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC------PRN 81 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~------~r~ 81 (218)
+-+...||+.+||+|+...+..+|++ .+++++|.+.+.+.. .+.-+...++|++|+-+|..+. +-+
T Consensus 14 ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~-----~~~~~~~rl~FE~fLpm~q~vaknk~q~t~e 88 (152)
T KOG0030|consen 14 KEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPK-----RREMNVKRLDFEEFLPMYQQVAKNKDQGTYE 88 (152)
T ss_pred HHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcc-----cchhhhhhhhHHHHHHHHHHHHhccccCcHH
Confidence 34556689999999999999999987 467888877665541 1222347899999999998763 346
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
+..+..+.||++++|.|...||++.|...| +. ++++++.+++...+. .+|.|.|+.|++-+++
T Consensus 89 dfvegLrvFDkeg~G~i~~aeLRhvLttlG-ek---------l~eeEVe~Llag~eD-----~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 89 DFVEGLRVFDKEGNGTIMGAELRHVLTTLG-EK---------LTEEEVEELLAGQED-----SNGCINYEAFVKHIMS 151 (152)
T ss_pred HHHHHHHhhcccCCcceeHHHHHHHHHHHH-hh---------ccHHHHHHHHccccc-----cCCcCcHHHHHHHHhc
Confidence 788889999999999999999999999997 54 699999999987664 5799999999998876
No 18
>KOG0037|consensus
Probab=99.41 E-value=7.5e-12 Score=100.73 Aligned_cols=127 Identities=15% Similarity=0.276 Sum_probs=107.3
Q ss_pred HHHHHHHHhhhhcCCCCcccHHHHHHHhcCC----CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchH
Q psy16202 7 LQLLSWMRLGMLVEAKGKVPVKVVSRTFASG----KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRND 82 (218)
Q Consensus 7 ~~~~~wl~~~fd~d~~G~I~~~el~~~l~~~----~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~e 82 (218)
.....|... .|+|++|+|+.+||+.+|..+ -+.+.++-|+.-+ |.+..|.++|.||..+++.+ ..
T Consensus 57 ~~~~~~f~~-vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mf-------d~~~~G~i~f~EF~~Lw~~i---~~ 125 (221)
T KOG0037|consen 57 PQLAGWFQS-VDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMF-------DRDNSGTIGFKEFKALWKYI---NQ 125 (221)
T ss_pred HHHHHHHHh-hCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHh-------cCCCCCccCHHHHHHHHHHH---HH
Confidence 345666654 699999999999999999853 2457788888877 77889999999999999976 46
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 83 IEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 83 i~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
++.+|+.||.|++|.|+..||+..|.+.+-. +++.-..-|+++|++. ..+.|.++.|+..+.
T Consensus 126 Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~----------Lspq~~~~lv~kyd~~----~~g~i~FD~FI~ccv 187 (221)
T KOG0037|consen 126 WRNVFRTYDRDRSGTIDSSELRQALTQLGYR----------LSPQFYNLLVRKYDRF----GGGRIDFDDFIQCCV 187 (221)
T ss_pred HHHHHHhcccCCCCcccHHHHHHHHHHcCcC----------CCHHHHHHHHHHhccc----cCCceeHHHHHHHHH
Confidence 9999999999999999999999999999863 4777778899999974 478999999998754
No 19
>KOG0036|consensus
Probab=99.23 E-value=2.2e-10 Score=99.77 Aligned_cols=129 Identities=9% Similarity=0.184 Sum_probs=109.2
Q ss_pred HHHHHHHhhhhcCCCCcccHHHHHHHhcCC----CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHH
Q psy16202 8 QLLSWMRLGMLVEAKGKVPVKVVSRTFASG----KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDI 83 (218)
Q Consensus 8 ~~~~wl~~~fd~d~~G~I~~~el~~~l~~~----~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei 83 (218)
.+.+-+.+.||.+++|.+++++|.+.|.+. ...+....+++.+ |.+.+|.++|+||.+.+.. .+.++
T Consensus 14 ~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~-------d~~~dg~vDy~eF~~Y~~~--~E~~l 84 (463)
T KOG0036|consen 14 IRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAM-------DANRDGRVDYSEFKRYLDN--KELEL 84 (463)
T ss_pred HHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhc-------ccCcCCcccHHHHHHHHHH--hHHHH
Confidence 344557778899999999999999888763 2235677778887 8899999999999987763 55679
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 84 EELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 84 ~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.++|+..|.+++|.|.++|+.+.|++.+- + +++++++++++..+++ +...|++++|..|++-
T Consensus 85 ~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi-~---------l~de~~~k~~e~~d~~----g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 85 YRIFQSIDLEHDGKIDPNEIWRYLKDLGI-Q---------LSDEKAAKFFEHMDKD----GKATIDLEEWRDHLLL 146 (463)
T ss_pred HHHHhhhccccCCccCHHHHHHHHHHhCC-c---------cCHHHHHHHHHHhccC----CCeeeccHHHHhhhhc
Confidence 99999999999999999999999999973 3 5899999999999987 7889999999999773
No 20
>KOG0034|consensus
Probab=99.05 E-value=5.8e-09 Score=83.65 Aligned_cols=129 Identities=10% Similarity=0.121 Sum_probs=93.3
Q ss_pred HHhhhhcC-CCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCC-CCHHHHHHHHHHcCC----chHHHHH
Q psy16202 13 MRLGMLVE-AKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPAD-FTFDKFYELYHKICP----RNDIEEL 86 (218)
Q Consensus 13 l~~~fd~d-~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~-l~f~eF~~~~~~l~~----r~ei~~i 86 (218)
...+++.+ ++|.|+.+|+..+.....+ ....+++..+ +..+++. |+|++|++++....+ +..++.+
T Consensus 38 rF~kl~~~~~~g~lt~eef~~i~~~~~N-p~~~rI~~~f-------~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~fa 109 (187)
T KOG0034|consen 38 RFKKLDRNNGDGYLTKEEFLSIPELALN-PLADRIIDRF-------DTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFA 109 (187)
T ss_pred HHHHhccccccCccCHHHHHHHHHHhcC-cHHHHHHHHH-------hccCCCCccCHHHHHHHHhhhcCCccHHHHHHHH
Confidence 34457888 9999999999987743211 2334445544 3344444 999999998876543 3468889
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHH----HHHHHHHhcchhhhhccCCcCHHHHHHHHcCC
Q psy16202 87 FQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKR----ALEIINTYEQNEEIRNEKSFSKDGLIRYLMSD 160 (218)
Q Consensus 87 F~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~----~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~ 160 (218)
|+.||.+++|+|+.+||...+...-++... .+++. +..++.+++.+ ++|.|++++|.+++.+.
T Consensus 110 F~vYD~~~~G~I~reel~~iv~~~~~~~~~-------~~~e~~~~i~d~t~~e~D~d----~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 110 FRVYDLDGDGFISREELKQILRMMVGENDD-------MSDEQLEDIVDKTFEEADTD----GDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHHHccCCc-------chHHHHHHHHHHHHHHhCCC----CCCcCcHHHHHHHHHcC
Confidence 999999999999999999999988654311 01333 44556677776 89999999999998764
No 21
>KOG0044|consensus
Probab=98.88 E-value=3e-08 Score=79.76 Aligned_cols=139 Identities=15% Similarity=0.213 Sum_probs=101.9
Q ss_pred HHHHHhhhhcC-CCCcccHHHHHHHhcC----CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC---ch
Q psy16202 10 LSWMRLGMLVE-AKGKVPVKVVSRTFAS----GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP---RN 81 (218)
Q Consensus 10 ~~wl~~~fd~d-~~G~I~~~el~~~l~~----~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~---r~ 81 (218)
..|-+. |-.+ .+|.++.++.+.+++. +..+.....+|+.+ |.+++|.|+|.||+..+..+.+ .+
T Consensus 29 ~~~Yr~-Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~f-------D~~~dg~i~F~Efi~als~~~rGt~ee 100 (193)
T KOG0044|consen 29 QQWYRG-FKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTF-------DKNKDGTIDFLEFICALSLTSRGTLEE 100 (193)
T ss_pred HHHHHH-hcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHh-------cccCCCCcCHHHHHHHHHHHcCCcHHH
Confidence 345443 4433 5899999999988875 23446677888887 8899999999999988876543 34
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCcc---ccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPR---LNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~---~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
-+.-+|+.||.|++|+||..|+.++++..-.-.. .++. +.-..+.+..++++++.+ .+|.+|+++|.....
T Consensus 101 kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~--~~~~~~~v~~if~k~D~n----~Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 101 KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPED--EETPEERVDKIFSKMDKN----KDGKLTLEEFIEGCK 174 (193)
T ss_pred HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcc--cccHHHHHHHHHHHcCCC----CCCcccHHHHHHHhh
Confidence 5677799999999999999999999887631110 0000 001235578899999987 889999999999876
Q ss_pred CCCC
Q psy16202 159 SDEN 162 (218)
Q Consensus 159 s~~n 162 (218)
...+
T Consensus 175 ~d~~ 178 (193)
T KOG0044|consen 175 ADPS 178 (193)
T ss_pred hCHH
Confidence 6443
No 22
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.74 E-value=3.3e-08 Score=70.07 Aligned_cols=65 Identities=12% Similarity=0.240 Sum_probs=56.4
Q ss_pred HHHHHHHHHcC-CCCCcccHHHHHHHHHHhcCCccccccccccCCH-HHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 82 DIEELFQSITK-GKAETINLDQFITFLNEKQRDPRLNEILYPLYDE-KRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 82 ei~~iF~~~d~-~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~-~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.|..+|+.||+ +++|+|+.+||+..|+.+-++. ++. +++.++|+..+.+ ++|.|+|++|+.+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~---------ls~~~~v~~mi~~~D~d----~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHL---------LKDVEGLEEKMKNLDVN----QDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhh---------ccCHHHHHHHHHHhCCC----CCCCCcHHHHHHHHHH
Confidence 57899999999 8899999999999999842333 466 8899999999988 8999999999998865
No 23
>PLN02964 phosphatidylserine decarboxylase
Probab=98.70 E-value=1.6e-07 Score=87.86 Aligned_cols=89 Identities=19% Similarity=0.237 Sum_probs=73.1
Q ss_pred HhhhhcCCCCcccHHHHHHHhc-CCCcHHH---HHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHH
Q psy16202 14 RLGMLVEAKGKVPVKVVSRTFA-SGKTEKL---VYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEEL 86 (218)
Q Consensus 14 ~~~fd~d~~G~I~~~el~~~l~-~~~~~~~---i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~i 86 (218)
...||.|++|+| +..+-+.+. ..+++.+ +.++|+.+ |.+++|.|+|+||..++..+. +++++..+
T Consensus 149 F~lfD~dgdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~-------D~DgdG~IdfdEFl~lL~~lg~~~seEEL~ea 220 (644)
T PLN02964 149 FDLLDPSSSNKV-VGSIFVSCSIEDPVETERSFARRILAIV-------DYDEDGQLSFSEFSDLIKAFGNLVAANKKEEL 220 (644)
T ss_pred HHHHCCCCCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHh-------CCCCCCeEcHHHHHHHHHHhccCCCHHHHHHH
Confidence 346789999998 555555555 2455544 89999988 788899999999999998753 45689999
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 87 FQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 87 F~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
|+.+|.+++|.|+.+||++.|...
T Consensus 221 Fk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 221 FKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHhCCCCCCcCCHHHHHHHHHhc
Confidence 999999999999999999999884
No 24
>PTZ00183 centrin; Provisional
Probab=98.67 E-value=3.2e-07 Score=70.70 Aligned_cols=92 Identities=8% Similarity=0.207 Sum_probs=76.8
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcC----CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc---CCchHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFAS----GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI---CPRNDI 83 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~----~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l---~~r~ei 83 (218)
..+...+|.+++|.|+..|+..++.. ...+..++.+|+.+ |.+++|.|+.++|..++..+ ....++
T Consensus 56 ~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-------D~~~~G~i~~~e~~~~l~~~~~~l~~~~~ 128 (158)
T PTZ00183 56 KQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLF-------DDDKTGKISLKNLKRVAKELGETITDEEL 128 (158)
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHh-------CCCCCCcCcHHHHHHHHHHhCCCCCHHHH
Confidence 34555678999999999999887653 23456788999988 78899999999999988764 457789
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHH
Q psy16202 84 EELFQSITKGKAETINLDQFITFLNE 109 (218)
Q Consensus 84 ~~iF~~~d~~~~g~it~~ef~~FL~~ 109 (218)
..+|..++.+++|.|+.++|..++..
T Consensus 129 ~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 129 QEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 99999999999999999999998865
No 25
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.66 E-value=9.8e-08 Score=63.32 Aligned_cols=65 Identities=15% Similarity=0.270 Sum_probs=53.0
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 83 IEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 83 i~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
|+++|+.+|.+++|+|+.+||+.+++..+....- ....+.+..+++.++++ ++|.|++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~------~~~~~~~~~~~~~~D~d----~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSD------EESDEMIDQIFREFDTD----GDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTH------HHHHHHHHHHHHHHTTT----SSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccH------HHHHHHHHHHHHHhCCC----CcCCCcHHHHhccC
Confidence 7899999999999999999999999999743210 01345567779999988 89999999999875
No 26
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.63 E-value=7.1e-08 Score=64.00 Aligned_cols=58 Identities=16% Similarity=0.247 Sum_probs=45.5
Q ss_pred HHHHHhhhhcCCCCcccHHHHHHHhcCCC-------cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHH
Q psy16202 10 LSWMRLGMLVEAKGKVPVKVVSRTFASGK-------TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELY 74 (218)
Q Consensus 10 ~~wl~~~fd~d~~G~I~~~el~~~l~~~~-------~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~ 74 (218)
++++...+|+|++|.|+.+|+..++.... ....+..+++.+ |.+++|.|+|+||..+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~-------D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREF-------DTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHH-------TTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHh-------CCCCcCCCcHHHHhccC
Confidence 45667778999999999999999887632 124566668887 78888899999998765
No 27
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.62 E-value=1.8e-07 Score=66.17 Aligned_cols=65 Identities=6% Similarity=0.242 Sum_probs=54.8
Q ss_pred HHHHHHHHHcC-CC-CCcccHHHHHHHHHHh--cCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 82 DIEELFQSITK-GK-AETINLDQFITFLNEK--QRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 82 ei~~iF~~~d~-~~-~g~it~~ef~~FL~~~--Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
.|-.+|.+|++ ++ +|+|+.+||++.|++. .+++ ++++++.++++..+.+ ++|.|++++|+.+|
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k---------~t~~ev~~m~~~~D~d----~dG~Idf~EFv~lm 77 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK---------LQDAEIAKLMEDLDRN----KDQEVNFQEYVTFL 77 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC---------CCHHHHHHHHHHhcCC----CCCCCcHHHHHHHH
Confidence 47889999997 55 6899999999999752 2344 5899999999999987 88999999999987
Q ss_pred cC
Q psy16202 158 MS 159 (218)
Q Consensus 158 ~s 159 (218)
..
T Consensus 78 ~~ 79 (88)
T cd05029 78 GA 79 (88)
T ss_pred HH
Confidence 63
No 28
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.60 E-value=2.2e-07 Score=65.72 Aligned_cols=64 Identities=5% Similarity=0.235 Sum_probs=55.3
Q ss_pred HHHHHHHHHc-CCCCC-cccHHHHHHHHHH-----hcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHH
Q psy16202 82 DIEELFQSIT-KGKAE-TINLDQFITFLNE-----KQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLI 154 (218)
Q Consensus 82 ei~~iF~~~d-~~~~g-~it~~ef~~FL~~-----~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~ 154 (218)
.|.++|+.|| .+++| .|+.+||+..|+. .+.. .+++++.++|+.++++ ++|.|++++|+
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~----------~~~~~v~~~i~~~D~n----~dG~v~f~eF~ 74 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEI----------KEQEVVDKVMETLDSD----GDGECDFQEFM 74 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCC----------CCHHHHHHHHHHhCCC----CCCcCcHHHHH
Confidence 5889999998 68889 5999999999998 5432 4788899999999987 88999999999
Q ss_pred HHHcC
Q psy16202 155 RYLMS 159 (218)
Q Consensus 155 ~~L~s 159 (218)
.++..
T Consensus 75 ~li~~ 79 (88)
T cd05027 75 AFVAM 79 (88)
T ss_pred HHHHH
Confidence 88753
No 29
>PTZ00184 calmodulin; Provisional
Probab=98.54 E-value=1.5e-06 Score=66.11 Aligned_cols=99 Identities=12% Similarity=0.253 Sum_probs=80.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCcccc
Q psy16202 41 KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLN 117 (218)
Q Consensus 41 ~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~ 117 (218)
+.++.+|+.+ |.+++|.|++++|..++..+. ..+++..+|+.++.+++|.|+.++|..++.......
T Consensus 11 ~~~~~~F~~~-------D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~--- 80 (149)
T PTZ00184 11 AEFKEAFSLF-------DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT--- 80 (149)
T ss_pred HHHHHHHHHH-------cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC---
Confidence 3466777777 788999999999999887653 345789999999999999999999999988653221
Q ss_pred ccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 118 EILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 118 ~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.+.+.+..+++.|+.+ ++|.|+.++|..+|..
T Consensus 81 ------~~~~~~~~~F~~~D~~----~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 81 ------DSEEEIKEAFKVFDRD----GNGFISAAELRHVMTN 112 (149)
T ss_pred ------cHHHHHHHHHHhhCCC----CCCeEeHHHHHHHHHH
Confidence 2456788899999987 7899999999998864
No 30
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.48 E-value=7.6e-07 Score=63.56 Aligned_cols=69 Identities=12% Similarity=0.200 Sum_probs=54.3
Q ss_pred HHHHHHHHHc-CCCCC-cccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 82 DIEELFQSIT-KGKAE-TINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 82 ei~~iF~~~d-~~~~g-~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.+.++|+.|+ .+++| .|+.+||+..|....++... ...++.++.+++++++.+ ++|.|++++|+.+|.+
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~-----~~~~~~~v~~i~~elD~n----~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLS-----SQKDPMLVDKIMNDLDSN----KDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcc-----cccCHHHHHHHHHHhCCC----CCCCCCHHHHHHHHHH
Confidence 5788999999 67777 59999999999875322100 013677899999999987 8899999999998764
No 31
>KOG4223|consensus
Probab=98.43 E-value=2.1e-06 Score=73.16 Aligned_cols=117 Identities=12% Similarity=0.298 Sum_probs=89.2
Q ss_pred hcCCCCcccHHHHHHHhcCC-C---cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHH-HHHcC--Cch-----HHHH
Q psy16202 18 LVEAKGKVPVKVVSRTFASG-K---TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYEL-YHKIC--PRN-----DIEE 85 (218)
Q Consensus 18 d~d~~G~I~~~el~~~l~~~-~---~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~-~~~l~--~r~-----ei~~ 85 (218)
|.|++|.++.+|+..+|... . ..-.|.+.+..+ |++++|.|+++||+.= |..-. ..| +-+.
T Consensus 173 D~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~-------Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~ 245 (325)
T KOG4223|consen 173 DQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDI-------DKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQ 245 (325)
T ss_pred ccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhc-------ccCCCCceeHHHHHhHHhhccCCCCCcccccccHHH
Confidence 89999999999999999752 1 123477778877 8999999999999974 43221 122 3456
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHH
Q psy16202 86 LFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIR 155 (218)
Q Consensus 86 iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~ 155 (218)
.|..+|.+++|+++.+|++.++.-.... ....+|..|+-+.+.+ ++|+||+++-+.
T Consensus 246 F~~~~DknkDG~L~~dEl~~WI~P~~~d----------~A~~EA~hL~~eaD~d----kD~kLs~eEIl~ 301 (325)
T KOG4223|consen 246 FFEFRDKNKDGKLDGDELLDWILPSEQD----------HAKAEARHLLHEADED----KDGKLSKEEILE 301 (325)
T ss_pred HHHHhhcCCCCccCHHHHhcccCCCCcc----------HHHHHHHHHhhhhccC----ccccccHHHHhh
Confidence 6777899999999999999887543322 3567888999888877 899999998753
No 32
>KOG0044|consensus
Probab=98.42 E-value=1.2e-06 Score=70.44 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=75.9
Q ss_pred hHHHHHHHHhhhhcCCCCcccHHHHHHHhcC---CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc---CC
Q psy16202 6 MLQLLSWMRLGMLVEAKGKVPVKVVSRTFAS---GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI---CP 79 (218)
Q Consensus 6 ~~~~~~wl~~~fd~d~~G~I~~~el~~~l~~---~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l---~~ 79 (218)
+.....-+...||+|++|.|+.+|+..+|.. +..++.+.=.|+-. |.+++|.|+.+|++.++..+ ..
T Consensus 62 ~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~ly-------D~dgdG~It~~Eml~iv~~i~~m~~ 134 (193)
T KOG0044|consen 62 ASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLY-------DLDGDGYITKEEMLKIVQAIYQMTG 134 (193)
T ss_pred HHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheee-------cCCCCceEcHHHHHHHHHHHHHHcc
Confidence 3445556777899999999999998777653 44455555567666 88999999999999987642 11
Q ss_pred -----------chHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 80 -----------RNDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 80 -----------r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
+.-+..+|+++|.+++|.+|.+||.+.....
T Consensus 135 ~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d 176 (193)
T KOG0044|consen 135 SKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKAD 176 (193)
T ss_pred cccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhC
Confidence 2346899999999999999999999887543
No 33
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.41 E-value=1.2e-06 Score=62.25 Aligned_cols=70 Identities=11% Similarity=0.239 Sum_probs=55.6
Q ss_pred hHHHHHHHHHc-CCCCC-cccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 81 NDIEELFQSIT-KGKAE-TINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 81 ~ei~~iF~~~d-~~~~g-~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
++|.++|+.|| .+++| .|+..||+..|+...+.. +.. ..+.+++.++++.++++ ++|.|++++|+.++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~-~~~----~~s~~~v~~i~~~~D~d----~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDF-LDA----QKDADAVDKIMKELDEN----GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHH-ccC----CCCHHHHHHHHHHHCCC----CCCcCcHHHHHHHHH
Confidence 56899999997 99999 499999999998632221 000 13778899999999987 789999999999876
Q ss_pred C
Q psy16202 159 S 159 (218)
Q Consensus 159 s 159 (218)
+
T Consensus 80 ~ 80 (92)
T cd05025 80 A 80 (92)
T ss_pred H
Confidence 4
No 34
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.41 E-value=1.9e-06 Score=61.51 Aligned_cols=58 Identities=19% Similarity=0.214 Sum_probs=47.6
Q ss_pred Hhhhh-cCCCC-cccHHHHHHHhcC--------CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC
Q psy16202 14 RLGML-VEAKG-KVPVKVVSRTFAS--------GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC 78 (218)
Q Consensus 14 ~~~fd-~d~~G-~I~~~el~~~l~~--------~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~ 78 (218)
...|| +|++| +|+..||+.+|.. ..++..+.++++++ |.+++|.|+|+||..++..|+
T Consensus 16 F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~el-------D~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 16 FHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDL-------DSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHh-------CCCCCCCCCHHHHHHHHHHHH
Confidence 34566 78998 5999999999954 12557899999998 788999999999999988653
No 35
>KOG0027|consensus
Probab=98.38 E-value=7.1e-06 Score=63.55 Aligned_cols=105 Identities=11% Similarity=0.226 Sum_probs=87.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCcccc
Q psy16202 41 KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLN 117 (218)
Q Consensus 41 ~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~ 117 (218)
.++.++|+.+ |.+++|.|+-+++..++..+. +..++..++..++.+++|.|+..+|...+..........
T Consensus 8 ~el~~~F~~f-------D~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 8 LELKEAFQLF-------DKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred HHHHHHHHHH-------CCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 5677888887 888999999999999998864 457899999999999999999999999998886543110
Q ss_pred ccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 118 EILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 118 ~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
+ .+.+++.+.++.|+.+ ++|.||.+++..+|..-.
T Consensus 81 ~-----~~~~el~eaF~~fD~d----~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 81 E-----ASSEELKEAFRVFDKD----GDGFISASELKKVLTSLG 115 (151)
T ss_pred c-----ccHHHHHHHHHHHccC----CCCcCcHHHHHHHHHHhC
Confidence 0 1456899999999998 899999999999987644
No 36
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.37 E-value=1.8e-06 Score=61.86 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=46.7
Q ss_pred HhhhhcCCCCcccHHHHHHHhcC-CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 14 RLGMLVEAKGKVPVKVVSRTFAS-GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 14 ~~~fd~d~~G~I~~~el~~~l~~-~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
...||+|++|.|+..+++.+|+. +.+++++.++++.+ |.+++|.|+|+||+.++..+
T Consensus 16 F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~-------d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 16 FRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLA-------DIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHh-------cCCCCCCcCHHHHHHHHHHH
Confidence 34578999999999999999876 45667888999887 67788999999999887653
No 37
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.37 E-value=1.8e-06 Score=61.12 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=49.4
Q ss_pred HHhhhhc-CCCCcccHHHHHHHhcC-CC---cH-HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC
Q psy16202 13 MRLGMLV-EAKGKVPVKVVSRTFAS-GK---TE-KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC 78 (218)
Q Consensus 13 l~~~fd~-d~~G~I~~~el~~~l~~-~~---~~-~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~ 78 (218)
....||+ +++|.|+..|++.+|.. .+ +. .++.++++.+ |.+++|.|+|+||..++..++
T Consensus 13 ~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~-------D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 13 NFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNL-------DVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHh-------CCCCCCCCcHHHHHHHHHHHH
Confidence 3345788 99999999999999987 32 34 7899999998 889999999999999987653
No 38
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.37 E-value=1.8e-06 Score=61.66 Aligned_cols=70 Identities=10% Similarity=0.189 Sum_probs=54.8
Q ss_pred hHHHHHHHHHcC-CC-CCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 81 NDIEELFQSITK-GK-AETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 81 ~ei~~iF~~~d~-~~-~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
.++..+|..||. ++ +|.|+.+||+..|+...+.. +. ...+.+++..+++.++.+ ++|.|++++|+.++.
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~-lg----~~~s~~ei~~~~~~~D~~----~dg~I~f~eF~~l~~ 78 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEF-LK----NQKDPMAVDKIMKDLDQN----RDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHH-hh----ccccHHHHHHHHHHhCCC----CCCcCcHHHHHHHHH
Confidence 468999999997 86 69999999999998632110 00 004788999999999987 789999999998876
Q ss_pred C
Q psy16202 159 S 159 (218)
Q Consensus 159 s 159 (218)
+
T Consensus 79 ~ 79 (94)
T cd05031 79 G 79 (94)
T ss_pred H
Confidence 4
No 39
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.36 E-value=1.8e-06 Score=64.18 Aligned_cols=59 Identities=17% Similarity=0.152 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHH
Q psy16202 41 KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFL 107 (218)
Q Consensus 41 ~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL 107 (218)
..+.-+|..+ |.+++|.|+.+|...+. ....+..+..+|..+|.+++|.||.+||..+|
T Consensus 48 ~~l~w~F~~l-------D~d~DG~Ls~~EL~~~~-l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 48 DPVGWMFNQL-------DGNYDGKLSHHELAPIR-LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHH-------CCCCCCcCCHHHHHHHH-ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4566667666 66777777777777665 45556667777777777777777777777777
No 40
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.34 E-value=2.5e-06 Score=61.13 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=55.0
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.++..+|..+|.+++|.|+.++|+++|+..+ ++.+++.+++..++.+ ++|.|++++|+.+|..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~------------~~~~ev~~i~~~~d~~----~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSG------------LPQTLLAKIWNLADID----NDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC------------CCHHHHHHHHHHhcCC----CCCCcCHHHHHHHHHH
Confidence 4678999999999999999999999998853 3678899999999886 7899999999988764
No 41
>KOG0037|consensus
Probab=98.33 E-value=9.6e-06 Score=65.71 Aligned_cols=121 Identities=13% Similarity=0.106 Sum_probs=93.0
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELF 87 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF 87 (218)
+-|-..||.+.+|+|.++|.+.+-+.. +..+++|+.. |.|++|.|+-.|+...+..+- ...-+..++
T Consensus 97 rlmI~mfd~~~~G~i~f~EF~~Lw~~i---~~Wr~vF~~~-------D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv 166 (221)
T KOG0037|consen 97 RLMISMFDRDNSGTIGFKEFKALWKYI---NQWRNVFRTY-------DRDRSGTIDSSELRQALTQLGYRLSPQFYNLLV 166 (221)
T ss_pred HHHHHHhcCCCCCccCHHHHHHHHHHH---HHHHHHHHhc-------ccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHH
Confidence 345567899999999999999876532 4678888887 899999999999999887653 333457779
Q ss_pred HHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 88 QSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 88 ~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
++|+..++|.|..++|...+...|+ .-+.+++++++.. +.-.+++++|+..-++
T Consensus 167 ~kyd~~~~g~i~FD~FI~ccv~L~~----------------lt~~Fr~~D~~q~--G~i~~~y~dfl~~t~~ 220 (221)
T KOG0037|consen 167 RKYDRFGGGRIDFDDFIQCCVVLQR----------------LTEAFRRRDTAQQ--GSITISYDDFLQMTMS 220 (221)
T ss_pred HHhccccCCceeHHHHHHHHHHHHH----------------HHHHHHHhccccc--eeEEEeHHHHHHHhhc
Confidence 9999776789999999999988874 2356788887621 2336889999876543
No 42
>KOG0038|consensus
Probab=98.33 E-value=3.2e-06 Score=64.39 Aligned_cols=117 Identities=14% Similarity=0.257 Sum_probs=80.4
Q ss_pred cccHHHHHHHh--cCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC--CchHH--HHHHHHHcCCCCCc
Q psy16202 24 KVPVKVVSRTF--ASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC--PRNDI--EELFQSITKGKAET 97 (218)
Q Consensus 24 ~I~~~el~~~l--~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~--~r~ei--~~iF~~~d~~~~g~ 97 (218)
+++.+.+.++= +..+-.+.|-+.| ..++.|.++|+.|+.++.-++ .+.+| ..+|+-||-+++++
T Consensus 55 ~vp~e~i~kMPELkenpfk~ri~e~F----------SeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~ 124 (189)
T KOG0038|consen 55 KVPFELIEKMPELKENPFKRRICEVF----------SEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEF 124 (189)
T ss_pred eecHHHHhhChhhhcChHHHHHHHHh----------ccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCc
Confidence 56677666632 2222334444444 457889999999999886543 23344 67789999999999
Q ss_pred ccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 98 INLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 98 it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
|-..+|..-++..-+.. ++++++.-+..+.-......++|.+++.+|-..++.
T Consensus 125 i~~~DL~~~l~~lTr~e---------Ls~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 125 IGHDDLEKTLTSLTRDE---------LSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred ccHHHHHHHHHHHhhcc---------CCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 99999999999887653 577776554444332222338999999999887664
No 43
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.32 E-value=2.7e-06 Score=56.15 Aligned_cols=56 Identities=11% Similarity=0.070 Sum_probs=47.1
Q ss_pred HhhhhcCCCCcccHHHHHHHhcC-CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy16202 14 RLGMLVEAKGKVPVKVVSRTFAS-GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK 76 (218)
Q Consensus 14 ~~~fd~d~~G~I~~~el~~~l~~-~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~ 76 (218)
...+|+|++|.|+..|++.+|.. +.++..+.++++.+ |.+++|.|+|+||+.++..
T Consensus 5 F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~-------d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 5 FRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLA-------DTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred HHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHh-------cCCCCCcCCHHHHHHHHHH
Confidence 34579999999999999998876 44667899999988 6788899999999988764
No 44
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.32 E-value=3.1e-06 Score=60.14 Aligned_cols=58 Identities=21% Similarity=0.220 Sum_probs=48.0
Q ss_pred HHhhhh-cCCCC-cccHHHHHHHhcC--------CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 13 MRLGML-VEAKG-KVPVKVVSRTFAS--------GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 13 l~~~fd-~d~~G-~I~~~el~~~l~~--------~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
....|| +|++| +|+..|++.+|+. .+++.++.++++.+ |.+++|.|+|++|+.++..+
T Consensus 14 ~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~-------D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 14 VFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKEL-------DENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHH-------CCCCCCcCcHHHHHHHHHHH
Confidence 344566 99999 5999999999964 13678899999998 77889999999999988764
No 45
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.31 E-value=3e-06 Score=60.46 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=47.2
Q ss_pred HHhhhhc-CC-CCcccHHHHHHHhcC--------CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy16202 13 MRLGMLV-EA-KGKVPVKVVSRTFAS--------GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK 76 (218)
Q Consensus 13 l~~~fd~-d~-~G~I~~~el~~~l~~--------~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~ 76 (218)
....||. |+ +|+|+..|++.+|.. ..+++++..+++.+ |.+++|.|+|++|+.++..
T Consensus 13 ~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~-------D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 13 TFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDL-------DQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHh-------CCCCCCcCcHHHHHHHHHH
Confidence 4456786 87 699999999998864 24668899999998 7788999999999988864
No 46
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.30 E-value=3.7e-06 Score=55.46 Aligned_cols=59 Identities=14% Similarity=0.238 Sum_probs=51.2
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 84 EELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 84 ~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
+++|..+|.+++|.|+.+||+.+|+..+ ++.+++.+++..++.+ ++|.|++++|+..+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g------------~~~~~~~~i~~~~d~~----~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG------------LPRSVLAQIWDLADTD----KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC------------CCHHHHHHHHHHhcCC----CCCcCCHHHHHHHHH
Confidence 5689999999999999999999998764 2667899999999887 789999999988764
No 47
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.27 E-value=1.7e-05 Score=62.00 Aligned_cols=102 Identities=17% Similarity=0.255 Sum_probs=85.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCcccc
Q psy16202 41 KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLN 117 (218)
Q Consensus 41 ~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~ 117 (218)
+++++.|+.+ |.+++|.|+..++..+++.+- +.++|.++|..++. +.+.|+..+|..+|...-+..
T Consensus 20 ~~lkeaF~l~-------D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~--- 88 (160)
T COG5126 20 QELKEAFQLF-------DRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG--- 88 (160)
T ss_pred HHHHHHHHHh-------CcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC---
Confidence 4577777776 888999999999999998753 46789999999999 678999999999997764332
Q ss_pred ccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCCC
Q psy16202 118 EILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDENA 163 (218)
Q Consensus 118 ~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n~ 163 (218)
-+.+++...++.|+.+ ++|.|+..+....|.+-...
T Consensus 89 ------~~~Eel~~aF~~fD~d----~dG~Is~~eL~~vl~~lge~ 124 (160)
T COG5126 89 ------DKEEELREAFKLFDKD----HDGYISIGELRRVLKSLGER 124 (160)
T ss_pred ------CcHHHHHHHHHHhCCC----CCceecHHHHHHHHHhhccc
Confidence 2678899999999998 89999999999998865543
No 48
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.26 E-value=4.7e-06 Score=58.88 Aligned_cols=56 Identities=16% Similarity=0.192 Sum_probs=47.4
Q ss_pred hhhh-cCCCC-cccHHHHHHHhcC-----C---CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 15 LGML-VEAKG-KVPVKVVSRTFAS-----G---KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 15 ~~fd-~d~~G-~I~~~el~~~l~~-----~---~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
..|| +|++| .|+..|++.+|+. . .++++|.++++.+ |.+++|.|+|++|..++..+
T Consensus 15 ~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~-------D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 15 HQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL-------DSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHh-------CCCCCCcCcHHHHHHHHHHH
Confidence 4567 79999 5999999999986 2 3567899999998 78899999999999988754
No 49
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.25 E-value=5.2e-06 Score=58.80 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=46.5
Q ss_pred hhhhcCCCC-cccHHHHHHHhcCC--------CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 15 LGMLVEAKG-KVPVKVVSRTFASG--------KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 15 ~~fd~d~~G-~I~~~el~~~l~~~--------~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
..+|+|++| +|+..|++.+|... ..+..+.++++++ |.+++|.|+|+||+.++..+
T Consensus 17 ~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~-------D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 17 KYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKL-------DLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHc-------CCCCCCcCcHHHHHHHHHHH
Confidence 346788876 99999999999763 2357899999998 78999999999999988765
No 50
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.24 E-value=6e-06 Score=58.48 Aligned_cols=69 Identities=12% Similarity=0.214 Sum_probs=52.7
Q ss_pred HHHHHHHHHc-CCCCC-cccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 82 DIEELFQSIT-KGKAE-TINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 82 ei~~iF~~~d-~~~~g-~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.|..+|+.|+ .++++ +|+.+||+.+|....... + ....++.++.++++.++.+ ++|.|++++|+.+|..
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~-~----~~~~~~~~~~~ll~~~D~d----~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASF-T----KNQKDPGVLDRMMKKLDLN----SDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHh-h----cCCCCHHHHHHHHHHcCCC----CCCcCcHHHHHHHHHH
Confidence 4788999954 55654 899999999999873110 0 0113678899999999987 8899999999998763
No 51
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.23 E-value=5.5e-06 Score=58.16 Aligned_cols=70 Identities=11% Similarity=0.200 Sum_probs=55.7
Q ss_pred hHHHHHHHHHcC--CCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 81 NDIEELFQSITK--GKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 81 ~ei~~iF~~~d~--~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
.++..+|..||. +++|.|+.++|..+++..-+.+.. +.++..++..++..++.+ ++|.|++++|+.++.
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~-----~~~~~~ei~~i~~~~d~~----~~g~I~f~eF~~~~~ 78 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLK-----NQKDPEAVDKIMKDLDVN----KDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhcc-----CCCCHHHHHHHHHHhccC----CCCcCcHHHHHHHHH
Confidence 468889999999 799999999999999863222200 013688899999999887 789999999999876
Q ss_pred C
Q psy16202 159 S 159 (218)
Q Consensus 159 s 159 (218)
.
T Consensus 79 ~ 79 (88)
T cd00213 79 K 79 (88)
T ss_pred H
Confidence 4
No 52
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.23 E-value=9.3e-06 Score=57.36 Aligned_cols=59 Identities=14% Similarity=0.195 Sum_probs=48.2
Q ss_pred HHHhhhhc-CC-CCcccHHHHHHHhcC----C--CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 12 WMRLGMLV-EA-KGKVPVKVVSRTFAS----G--KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 12 wl~~~fd~-d~-~G~I~~~el~~~l~~----~--~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
-+..+++. |+ +|.|+..|++++|.. + .+++++.++++.+ |.+++|.|+|+||..++..+
T Consensus 14 ~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~-------D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 14 AIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDL-------DRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHh-------cCCCCCCCcHHHHHHHHHHH
Confidence 34455665 77 899999999999952 2 4678999999998 78899999999999988764
No 53
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.22 E-value=7.9e-06 Score=51.91 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=52.7
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 83 IEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 83 i~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
+..+|..++.+++|.|+..+|..+++..+.. .+.+.+..++.+++++ ++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~----------~~~~~~~~~~~~~~~~----~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEG----------LSEEEIDEMIREVDKD----GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC----------CCHHHHHHHHHHhCCC----CCCeEeHHHHHHHh
Confidence 6788999999999999999999999988632 4778888999999876 67899999998875
No 54
>KOG4223|consensus
Probab=98.20 E-value=8.5e-06 Score=69.55 Aligned_cols=134 Identities=16% Similarity=0.231 Sum_probs=96.7
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHHHhcCCC---cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC------C
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSRTFASGK---TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC------P 79 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~~l~~~~---~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~------~ 79 (218)
++.-|....|.+++|.|+..|++..+.... ...++.+-+... |.+.+|.|+|+++...+-... .
T Consensus 78 rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~-------d~~~Dg~i~~eey~~~~~~~~~~~~~~~ 150 (325)
T KOG4223|consen 78 RLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEY-------DKNKDGFITWEEYLPQTYGRVDLPDEFP 150 (325)
T ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccCccceeeHHHhhhhhhhcccCccccc
Confidence 344555567899999999999998765421 123444555555 778899999999987543210 0
Q ss_pred --------ch---HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCc
Q psy16202 80 --------RN---DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSF 148 (218)
Q Consensus 80 --------r~---ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~l 148 (218)
.. .-++-|+..|.|++|.+|.+||..||.-+- .| .+.+--+++-+...+.+ ++|.|
T Consensus 151 d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe-~p--------~M~~iVi~Etl~d~Dkn----~DG~I 217 (325)
T KOG4223|consen 151 DEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEE-HP--------HMKDIVIAETLEDIDKN----GDGKI 217 (325)
T ss_pred cchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhh-cc--------hHHHHHHHHHHhhcccC----CCCce
Confidence 01 125678889999999999999999997664 22 23444466677777777 89999
Q ss_pred CHHHHHHHHcCCCC
Q psy16202 149 SKDGLIRYLMSDEN 162 (218)
Q Consensus 149 s~~~F~~~L~s~~n 162 (218)
++++|+.=|.+.+.
T Consensus 218 ~~eEfigd~~~~~~ 231 (325)
T KOG4223|consen 218 SLEEFIGDLYSHEG 231 (325)
T ss_pred eHHHHHhHHhhccC
Confidence 99999999998874
No 55
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.19 E-value=5.9e-06 Score=58.33 Aligned_cols=65 Identities=12% Similarity=0.269 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCC--CCCcccHHHHHHHHHHhcCCccccccccccCC----HHHHHHHHHHhcchhhhhccCCcCHHHHHH
Q psy16202 82 DIEELFQSITKG--KAETINLDQFITFLNEKQRDPRLNEILYPLYD----EKRALEIINTYEQNEEIRNEKSFSKDGLIR 155 (218)
Q Consensus 82 ei~~iF~~~d~~--~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t----~~~~~~li~~~~~~~~~~~~g~ls~~~F~~ 155 (218)
.|..+|.+|+.. ++|.|+.+||+.+|....++. ++ ++++..+++.++.+ ++|.|++++|+.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~---------~t~~~~~~~v~~i~~~~D~d----~dG~I~f~eF~~ 75 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNF---------LKKEKNQKAIDKIFEDLDTN----QDGQLSFEEFLV 75 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHh---------hccCCCHHHHHHHHHHcCCC----CCCcCcHHHHHH
Confidence 467889999865 358999999999997554332 34 78899999999987 789999999999
Q ss_pred HHcC
Q psy16202 156 YLMS 159 (218)
Q Consensus 156 ~L~s 159 (218)
++.+
T Consensus 76 ~~~~ 79 (88)
T cd05030 76 LVIK 79 (88)
T ss_pred HHHH
Confidence 8764
No 56
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.14 E-value=5.8e-06 Score=52.59 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=43.9
Q ss_pred CCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 95 AETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 95 ~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
+|.|+.++|+.+|...+-.. ++++++..|+..++++ ++|.|++++|+.+|.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~---------~s~~e~~~l~~~~D~~----~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKD---------LSEEEVDRLFREFDTD----GDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSS---------SCHHHHHHHHHHHTTS----SSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCC---------CCHHHHHHHHHhcccC----CCCCCCHHHHHHHHH
Confidence 58999999999996655331 3889999999999998 899999999999875
No 57
>KOG0028|consensus
Probab=98.08 E-value=3.2e-05 Score=59.83 Aligned_cols=87 Identities=11% Similarity=0.246 Sum_probs=75.0
Q ss_pred hhhcCCCCcccHHHHHHHhcC----CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHH
Q psy16202 16 GMLVEAKGKVPVKVVSRTFAS----GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQ 88 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l~~----~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~ 88 (218)
.+|+++.|+|+..++...+.. ..+..+|..+|+.. |.+++|.|++.+|..+...|- +.+|+.+.-.
T Consensus 77 d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~-------D~D~~Gkis~~~lkrvakeLgenltD~El~eMIe 149 (172)
T KOG0028|consen 77 DVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLF-------DDDKTGKISQRNLKRVAKELGENLTDEELMEMIE 149 (172)
T ss_pred hhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcc-------cccCCCCcCHHHHHHHHHHhCccccHHHHHHHHH
Confidence 457889999999999887654 23678899999987 788999999999999998875 4679999999
Q ss_pred HHcCCCCCcccHHHHHHHHHH
Q psy16202 89 SITKGKAETINLDQFITFLNE 109 (218)
Q Consensus 89 ~~d~~~~g~it~~ef~~FL~~ 109 (218)
.++.+++|-|+.++|.+.++.
T Consensus 150 EAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 150 EADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HhcccccccccHHHHHHHHhc
Confidence 999999999999999988764
No 58
>PLN02964 phosphatidylserine decarboxylase
Probab=98.08 E-value=4e-05 Score=71.99 Aligned_cols=96 Identities=8% Similarity=0.180 Sum_probs=75.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC----CchH---HHHHHHHHcCCCCCcccHHHHHHHHHHhcCC
Q psy16202 41 KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC----PRND---IEELFQSITKGKAETINLDQFITFLNEKQRD 113 (218)
Q Consensus 41 ~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~----~r~e---i~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e 113 (218)
+++.+.|+.+ |.+++|.+ .. .++..+- +..+ +.++|+.+|.+++|.|+.+||..+|...+.
T Consensus 143 ~elkeaF~lf-------D~dgdG~i-Lg---~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~- 210 (644)
T PLN02964 143 ESACESFDLL-------DPSSSNKV-VG---SIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN- 210 (644)
T ss_pred HHHHHHHHHH-------CCCCCCcC-HH---HHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc-
Confidence 5577778777 77888876 33 3344332 2233 789999999999999999999999997753
Q ss_pred ccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 114 PRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 114 ~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
. .+++++.++++.++.+ ++|.|++++|...|....
T Consensus 211 ~---------~seEEL~eaFk~fDkD----gdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 211 L---------VAANKKEELFKAADLN----GDGVVTIDELAALLALQQ 245 (644)
T ss_pred C---------CCHHHHHHHHHHhCCC----CCCcCCHHHHHHHHHhcc
Confidence 2 3788899999999998 789999999999988743
No 59
>PF14658 EF-hand_9: EF-hand domain
Probab=98.06 E-value=1.3e-05 Score=53.19 Aligned_cols=61 Identities=18% Similarity=0.379 Sum_probs=53.3
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHhcC-CccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 85 ELFQSITKGKAETINLDQFITFLNEKQR-DPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 85 ~iF~~~d~~~~g~it~~ef~~FL~~~Q~-e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
.+|..+|.++.|.+.+.++..+|+..++ .| +++++++|.+.++|+. .++.|++++|...|.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p----------~e~~Lq~l~~elDP~g---~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSP----------EESELQDLINELDPEG---RDGSVNFDTFLAIMR 63 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCC----------cHHHHHHHHHHhCCCC---CCceEeHHHHHHHHH
Confidence 3699999999999999999999999986 44 8889999999999982 248999999988764
No 60
>KOG2643|consensus
Probab=98.03 E-value=3.3e-05 Score=68.35 Aligned_cols=122 Identities=15% Similarity=0.199 Sum_probs=78.6
Q ss_pred hhhcCCCCcccHHHHHHHh---cC----C----------CcH-HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 16 GMLVEAKGKVPVKVVSRTF---AS----G----------KTE-KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l---~~----~----------~~~-~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
.||+||+|.|+.+|+..+. ++ + ++- -.+...+...- ...++++.|++++|++|+..|
T Consensus 241 MFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yF-----FG~rg~~kLs~deF~~F~e~L 315 (489)
T KOG2643|consen 241 MFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYF-----FGKRGNGKLSIDEFLKFQENL 315 (489)
T ss_pred eeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHh-----hccCCCccccHHHHHHHHHHH
Confidence 4799999999999997654 21 0 111 12222222210 145788999999999999886
Q ss_pred CCchHHHHH-HHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHH
Q psy16202 78 CPRNDIEEL-FQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRY 156 (218)
Q Consensus 78 ~~r~ei~~i-F~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~ 156 (218)
. .||.++ |..++...+|.|+..+|...|-..-+.+..+ .....+..-+++.. .+..||+++|..|
T Consensus 316 q--~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~-------k~~~lkrvk~kf~~-----~~~gISl~Ef~~F 381 (489)
T KOG2643|consen 316 Q--EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKK-------KHKYLKRVKEKFKD-----DGKGISLQEFKAF 381 (489)
T ss_pred H--HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHh-------HHHHHHHHHHhccC-----CCCCcCHHHHHHH
Confidence 4 456555 9999999889999999999887664332100 01112333334432 2457999888776
No 61
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.99 E-value=5.2e-05 Score=53.14 Aligned_cols=57 Identities=19% Similarity=0.199 Sum_probs=46.8
Q ss_pred Hhhhhc--CCCCcccHHHHHHHhcC--C--C----cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 14 RLGMLV--EAKGKVPVKVVSRTFAS--G--K----TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 14 ~~~fd~--d~~G~I~~~el~~~l~~--~--~----~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
...||+ |++|.|+..|+..++.. + . +++++..+++.+ |.+++|.|+|++|+.++..+
T Consensus 14 F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~-------d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 14 FHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDL-------DVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHh-------ccCCCCcCcHHHHHHHHHHH
Confidence 445788 89999999999998864 1 1 367899999998 67888999999999988754
No 62
>KOG2562|consensus
Probab=97.91 E-value=6.1e-05 Score=67.14 Aligned_cols=129 Identities=15% Similarity=0.199 Sum_probs=89.7
Q ss_pred hhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcC
Q psy16202 16 GMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITK 92 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~ 92 (218)
.+|+|.||-|+..+|++.=....+..-|..+|.. +++++ -.-.+|.++|++|+-|+-.+. +.+-|+..|+-+|-
T Consensus 286 eLD~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~--v~r~~-~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDl 362 (493)
T KOG2562|consen 286 ELDTDHDGLIDKEDLKRYGDHTLTERIVDRIFSQ--VPRGF-TVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDL 362 (493)
T ss_pred hhccccccccCHHHHHHHhccchhhHHHHHHHhh--ccccc-eeeecCcccHHHHHHHHHHhccCCCccchhhheeeeec
Confidence 4699999999999998854444566778888883 33333 234578899999999987764 35679999999999
Q ss_pred CCCCcccHHHHHHHHHHhcCCc--cccccccccCCHHH-HHHHHHHhcchhhhhccCCcCHHHHHH
Q psy16202 93 GKAETINLDQFITFLNEKQRDP--RLNEILYPLYDEKR-ALEIINTYEQNEEIRNEKSFSKDGLIR 155 (218)
Q Consensus 93 ~~~g~it~~ef~~FL~~~Q~e~--~~~~~~~~~~t~~~-~~~li~~~~~~~~~~~~g~ls~~~F~~ 155 (218)
+++|.|+..|++-|....+.-. ..+|.+ .=++ ..+|+.-..|. ..+.||+.+|..
T Consensus 363 d~~G~Lt~~el~~fyeeq~~rm~~~~~e~l----~fed~l~qi~DMvkP~----~~~kItLqDlk~ 420 (493)
T KOG2562|consen 363 DGDGILTLNELRYFYEEQLQRMECMGQEAL----PFEDALCQIRDMVKPE----DENKITLQDLKG 420 (493)
T ss_pred cCCCcccHHHHHHHHHHHHHHHHhcCCCcc----cHHHHHHHHHHHhCcc----CCCceeHHHHhh
Confidence 9999999999999987764211 112211 2233 34455555554 456777777654
No 63
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.90 E-value=7.7e-05 Score=47.20 Aligned_cols=50 Identities=14% Similarity=0.375 Sum_probs=35.3
Q ss_pred CCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcCCCCCcccHHHHHHHH
Q psy16202 58 DVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITKGKAETINLDQFITFL 107 (218)
Q Consensus 58 d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~~~~g~it~~ef~~FL 107 (218)
|.+++|.|++++|..++..+. +.+.+..+|..++.+++|.|+.++|..++
T Consensus 10 d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 10 DKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 566677777777777776542 34566777888777777778888777765
No 64
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.85 E-value=2.9e-05 Score=48.76 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=40.1
Q ss_pred cccHHHHHHHhcCCC---cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC
Q psy16202 24 KVPVKVVSRTFASGK---TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC 78 (218)
Q Consensus 24 ~I~~~el~~~l~~~~---~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~ 78 (218)
+++.+|++++|+..+ ++..+..+|+++ |.+++|.|+.+||..||+.|+
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~-------D~s~~g~Le~~Ef~~Fy~~LT 51 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQEC-------DKSQSGRLEGEEFEEFYKRLT 51 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH--------SSSSSEBEHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHh-------cccCCCCccHHHHHHHHHHhC
Confidence 578999999998754 557899999998 888999999999999998763
No 65
>PF14658 EF-hand_9: EF-hand domain
Probab=97.82 E-value=5.1e-05 Score=50.37 Aligned_cols=56 Identities=20% Similarity=0.277 Sum_probs=47.2
Q ss_pred HhhhhcCCCCcccHHHHHHHhcC----CCcHHHHHHHHHHhCCCCCCCCCCCC-CCCCHHHHHHHHHH
Q psy16202 14 RLGMLVEAKGKVPVKVVSRTFAS----GKTEKLVYQTMAELGLPSGKNDVIEP-ADFTFDKFYELYHK 76 (218)
Q Consensus 14 ~~~fd~d~~G~I~~~el~~~l~~----~~~~~~i~~~~~~~~~~~~k~d~~~~-g~l~f~eF~~~~~~ 76 (218)
...||+++.|.|++++|...|++ .+++.+++.+.+++ |.++. |.++|+.|+..++.
T Consensus 4 F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~el-------DP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 4 FDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINEL-------DPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred hhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHh-------CCCCCCceEeHHHHHHHHHH
Confidence 34689999999999999999986 35678899999998 66666 99999999988763
No 66
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.81 E-value=3.2e-05 Score=43.05 Aligned_cols=28 Identities=18% Similarity=0.522 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHH
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNE 109 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~ 109 (218)
|++.+|+.||.|++|.|+.+||...|+.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 5788899999998899999999888865
No 67
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.79 E-value=0.00011 Score=54.55 Aligned_cols=62 Identities=11% Similarity=0.239 Sum_probs=52.1
Q ss_pred chHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 80 RNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 80 r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
...|.-.|..+|.+++|.|+.+||..+. . .+ ....+..+++.++.+ ++|.||+++|...+..
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l--~~----------~e~~~~~f~~~~D~n----~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR--L--DP----------NEHCIKPFFESCDLD----KDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH--c--cc----------hHHHHHHHHHHHCCC----CCCCCCHHHHHHHHhC
Confidence 4578999999999999999999999887 2 22 345577899999987 8999999999999843
No 68
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.76 E-value=6.6e-05 Score=47.59 Aligned_cols=47 Identities=19% Similarity=0.458 Sum_probs=27.1
Q ss_pred CCCCCHHHHHHHHHHc----CCchHHHHHHHHHcCCCCCcccHHHHHHHHH
Q psy16202 62 PADFTFDKFYELYHKI----CPRNDIEELFQSITKGKAETINLDQFITFLN 108 (218)
Q Consensus 62 ~g~l~f~eF~~~~~~l----~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~ 108 (218)
+|.|+.++|..++..+ ....++..+|..+|.+++|.|+.+||..++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 3455566666555433 2344566666666666666666666666554
No 69
>KOG0034|consensus
Probab=97.69 E-value=0.00032 Score=56.40 Aligned_cols=89 Identities=8% Similarity=0.149 Sum_probs=69.5
Q ss_pred hhhhcCCCCc-ccHHHHHHHhcCC---Cc-HHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC------c---
Q psy16202 15 LGMLVEAKGK-VPVKVVSRTFASG---KT-EKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP------R--- 80 (218)
Q Consensus 15 ~~fd~d~~G~-I~~~el~~~l~~~---~~-~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~------r--- 80 (218)
..|+.+++|. |+.++..++|..- .. +..++=+|+-. |.+++|.|+.+|+..++..+.. .
T Consensus 73 ~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vY-------D~~~~G~I~reel~~iv~~~~~~~~~~~~e~~ 145 (187)
T KOG0034|consen 73 DRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVY-------DLDGDGFISREELKQILRMMVGENDDMSDEQL 145 (187)
T ss_pred HHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHh-------cCCCCCcCcHHHHHHHHHHHHccCCcchHHHH
Confidence 4577888888 9999999988752 12 23555567776 8899999999999999887542 1
Q ss_pred h-HHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 81 N-DIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 81 ~-ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
. -+..+|.++|.|++|.|+.+||.+++...
T Consensus 146 ~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 146 EDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 1 24788999999999999999999998643
No 70
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.68 E-value=0.00027 Score=50.05 Aligned_cols=67 Identities=10% Similarity=0.192 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
-|..+|.+|++++ +.|+..||+..|..+=.. ++-..-++..+.++|+..+.+ ++|.++|.+|+.++.
T Consensus 9 ~lI~~FhkYaG~~-~tLsk~Elk~Ll~~Elp~-----~l~~~~d~~~vd~im~~LD~n----~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEK-NYLNRDDLQKLMEKEFSE-----FLKNQNDPMAVDKIMKDLDDC----RDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCC-CcCCHHHHHHHHHHHhHH-----HHcCCCCHHHHHHHHHHhCCC----CCCcCcHHHHHHHHH
Confidence 4678999999665 699999999999876321 111123567789999999987 899999999998865
No 71
>KOG4251|consensus
Probab=97.67 E-value=0.00022 Score=59.07 Aligned_cols=132 Identities=15% Similarity=0.186 Sum_probs=82.0
Q ss_pred HHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-------------
Q psy16202 13 MRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP------------- 79 (218)
Q Consensus 13 l~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~------------- 79 (218)
+..+.|+|.||+|+.+|+++.+.. ++....++.+.+..+.....|.+++|.+.++||.--+.....
T Consensus 106 iFsKvDVNtDrkisAkEmqrwIme-ktaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairln 184 (362)
T KOG4251|consen 106 IFSKVDVNTDRKISAKEMQRWIME-KTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLN 184 (362)
T ss_pred HHhhcccCccccccHHHHHHHHHH-HHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhcc
Confidence 444568999999999999987763 333445555555444445568999999999999754432211
Q ss_pred -----chHHHHHHHH-----HcCCC---CCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccC
Q psy16202 80 -----RNDIEELFQS-----ITKGK---AETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEK 146 (218)
Q Consensus 80 -----r~ei~~iF~~-----~d~~~---~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g 146 (218)
.++-+.+-+. |..|. +-.+|..||..||.-+-.... -..-+.+|+..++.+ ++.
T Consensus 185 eelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgm---------LrfmVkeivrdlDqd----gDk 251 (362)
T KOG4251|consen 185 EELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGM---------LRFMVKEIVRDLDQD----GDK 251 (362)
T ss_pred CcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhh---------HHHHHHHHHHHhccC----CCe
Confidence 1111222221 11111 124777899999876542221 123467788888887 777
Q ss_pred CcCHHHHHHHHc
Q psy16202 147 SFSKDGLIRYLM 158 (218)
Q Consensus 147 ~ls~~~F~~~L~ 158 (218)
++|..+|+...-
T Consensus 252 qlSvpeFislpv 263 (362)
T KOG4251|consen 252 QLSVPEFISLPV 263 (362)
T ss_pred eecchhhhcCCC
Confidence 888888876543
No 72
>KOG0041|consensus
Probab=97.52 E-value=0.00033 Score=56.27 Aligned_cols=75 Identities=15% Similarity=0.285 Sum_probs=57.7
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccC
Q psy16202 67 FDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEK 146 (218)
Q Consensus 67 f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g 146 (218)
|.+|-.|-.. .=.+...+|++||.+.+|+|+..||+.+|.+.+ .| -|.--...+|.+.+-+ .+|
T Consensus 87 yteF~eFsrk--qIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLg-ap---------QTHL~lK~mikeVded----~dg 150 (244)
T KOG0041|consen 87 YTEFSEFSRK--QIKDAESMFKQYDEDRDGFIDLMELKRMMEKLG-AP---------QTHLGLKNMIKEVDED----FDG 150 (244)
T ss_pred hhhhhHHHHH--HHHHHHHHHHHhcccccccccHHHHHHHHHHhC-Cc---------hhhHHHHHHHHHhhcc----ccc
Confidence 4555544332 113567889999999999999999999999997 44 1455578899999987 789
Q ss_pred CcCHHHHHHHH
Q psy16202 147 SFSKDGLIRYL 157 (218)
Q Consensus 147 ~ls~~~F~~~L 157 (218)
.||+-+|+-..
T Consensus 151 klSfreflLIf 161 (244)
T KOG0041|consen 151 KLSFREFLLIF 161 (244)
T ss_pred chhHHHHHHHH
Confidence 99999997543
No 73
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.49 E-value=0.00018 Score=40.42 Aligned_cols=28 Identities=18% Similarity=0.377 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHH
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNE 109 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~ 109 (218)
+++.+|+.||.+++|.|+.+||+.+|++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 5789999999999999999999999983
No 74
>KOG2643|consensus
Probab=97.40 E-value=0.0011 Score=58.89 Aligned_cols=124 Identities=8% Similarity=0.120 Sum_probs=82.4
Q ss_pred hhhcCCCCcccHHHHHHHhcC---CCcH---HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHH
Q psy16202 16 GMLVEAKGKVPVKVVSRTFAS---GKTE---KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQS 89 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l~~---~~~~---~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~ 89 (218)
.||...+|.|+..+...+|-. .+.+ ..+++.-+++ +.. ...|+++||..|+..+..-.++.-+...
T Consensus 326 ~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf-------~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~f 397 (489)
T KOG2643|consen 326 RFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKF-------KDD-GKGISLQEFKAFFRFLNNLNDFDIALRF 397 (489)
T ss_pred HhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhc-------cCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHH
Confidence 346777788888888876643 2322 2233333333 122 5578999999988877776777777666
Q ss_pred HcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 90 ITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 90 ~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
|..-+ ..|+..+|++.-...-+.+ +++.-+.-++.-|+.+ ++|.|+.++|+..|....
T Consensus 398 y~~Ag-~~i~~~~f~raa~~vtGve---------LSdhVvdvvF~IFD~N----~Dg~LS~~EFl~Vmk~Rm 455 (489)
T KOG2643|consen 398 YHMAG-ASIDEKTFQRAAKVVTGVE---------LSDHVVDVVFTIFDEN----NDGTLSHKEFLAVMKRRM 455 (489)
T ss_pred HHHcC-CCCCHHHHHHHHHHhcCcc---------cccceeeeEEEEEccC----CCCcccHHHHHHHHHHHh
Confidence 65444 4799999999888776554 2333334455566766 899999999999886533
No 75
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.40 E-value=0.00053 Score=48.59 Aligned_cols=52 Identities=15% Similarity=0.223 Sum_probs=43.2
Q ss_pred CCCCcccHHHHHHHhcC--------CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC
Q psy16202 20 EAKGKVPVKVVSRTFAS--------GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC 78 (218)
Q Consensus 20 d~~G~I~~~el~~~l~~--------~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~ 78 (218)
...|+++.+|++.+|.+ ...++.|.++|+.+ |.+++|.++|.||..++..+.
T Consensus 19 G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~L-------D~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 19 GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDL-------DDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHh-------CCCCCCcCcHHHHHHHHHHHH
Confidence 34679999999999864 23467899999998 889999999999999988653
No 76
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.38 E-value=0.00044 Score=48.70 Aligned_cols=50 Identities=16% Similarity=0.237 Sum_probs=41.7
Q ss_pred CCCcccHHHHHHHhcC-C---Cc----HHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 21 AKGKVPVKVVSRTFAS-G---KT----EKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 21 ~~G~I~~~el~~~l~~-~---~~----~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
.+|.|+..|++.+|.. . .+ +.++..+++.+ |.+++|.|+|++|..++..+
T Consensus 23 ~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~-------D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 23 HPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDL-------DTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred CcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHc-------CCCCCCcCcHHHHHHHHHHH
Confidence 5799999999999963 2 23 67899999998 77889999999999988754
No 77
>KOG0377|consensus
Probab=97.36 E-value=0.0029 Score=56.47 Aligned_cols=122 Identities=13% Similarity=0.233 Sum_probs=81.4
Q ss_pred hhcCCCCcccHHHHHHHhcCC---C-cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH--------------Hc-
Q psy16202 17 MLVEAKGKVPVKVVSRTFASG---K-TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYH--------------KI- 77 (218)
Q Consensus 17 fd~d~~G~I~~~el~~~l~~~---~-~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~--------------~l- 77 (218)
.|...+|+|++.....++... + .=..+...+. ....+|.+.|.+-.+... .|
T Consensus 473 ~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla---------~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLY 543 (631)
T KOG0377|consen 473 YDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLA---------NGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETLY 543 (631)
T ss_pred cChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhcc---------CCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHHH
Confidence 377889999999999988751 1 1122221111 123345555555444332 11
Q ss_pred CCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 78 CPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 78 ~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
..+..++.||+-+|+|++|.||.+||+.-..-..... |- +++++++.++-+..+-+ ++|.|++.+|+.-.
T Consensus 544 r~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~--~~----~i~~~~i~~la~~mD~N----kDG~IDlNEfLeAF 613 (631)
T KOG0377|consen 544 RNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHM--NG----AISDDEILELARSMDLN----KDGKIDLNEFLEAF 613 (631)
T ss_pred hchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhc--CC----CcCHHHHHHHHHhhccC----CCCcccHHHHHHHH
Confidence 2467899999999999999999999998654443211 10 16888888888877776 89999999998754
No 78
>KOG0036|consensus
Probab=97.35 E-value=0.0011 Score=58.68 Aligned_cols=86 Identities=15% Similarity=0.286 Sum_probs=73.0
Q ss_pred hhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcC
Q psy16202 16 GMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITK 92 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~ 92 (218)
..|.|.||.++..|+++.+. ..|.++..+|+.+ |.+++|.|+-.|..+.+..+- ..++..++|...++
T Consensus 59 ~~d~~~dg~vDy~eF~~Y~~--~~E~~l~~~F~~i-------D~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~ 129 (463)
T KOG0036|consen 59 AMDANRDGRVDYSEFKRYLD--NKELELYRIFQSI-------DLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDK 129 (463)
T ss_pred hcccCcCCcccHHHHHHHHH--HhHHHHHHHHhhh-------ccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhcc
Confidence 45899999999999999876 3456789999998 788999999999988877653 45778899999999
Q ss_pred CCCCcccHHHHHHHHHHh
Q psy16202 93 GKAETINLDQFITFLNEK 110 (218)
Q Consensus 93 ~~~g~it~~ef~~FL~~~ 110 (218)
++++.|+.+|+++|+.-.
T Consensus 130 ~g~~~I~~~e~rd~~ll~ 147 (463)
T KOG0036|consen 130 DGKATIDLEEWRDHLLLY 147 (463)
T ss_pred CCCeeeccHHHHhhhhcC
Confidence 999999999999998543
No 79
>KOG0041|consensus
Probab=97.29 E-value=0.0025 Score=51.29 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=66.3
Q ss_pred HHhhhhcCCCCcccHHHHHHHhcCC---CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-----chHHH
Q psy16202 13 MRLGMLVEAKGKVPVKVVSRTFASG---KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP-----RNDIE 84 (218)
Q Consensus 13 l~~~fd~d~~G~I~~~el~~~l~~~---~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~-----r~ei~ 84 (218)
+..++|.+.||.|++-||+.+|.+. .|.--++++++++ |.+.+|.|+|-||+-+|+.... ...+.
T Consensus 104 ~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeV-------ded~dgklSfreflLIfrkaaagEL~~ds~~~ 176 (244)
T KOG0041|consen 104 MFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEV-------DEDFDGKLSFREFLLIFRKAAAGELQEDSGLL 176 (244)
T ss_pred HHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHh-------hcccccchhHHHHHHHHHHHhccccccchHHH
Confidence 4455699999999999999999874 2445588999998 8899999999999998875322 22233
Q ss_pred HHHHH--HcCCCCCcccHHHHHHHHHHhcC
Q psy16202 85 ELFQS--ITKGKAETINLDQFITFLNEKQR 112 (218)
Q Consensus 85 ~iF~~--~d~~~~g~it~~ef~~FL~~~Q~ 112 (218)
.+=+. .|-.+.|+..+..|-+.=.+.|.
T Consensus 177 ~LAr~~eVDVskeGV~GAknFFeAKI~~qs 206 (244)
T KOG0041|consen 177 RLARLSEVDVSKEGVSGAKNFFEAKIEAQS 206 (244)
T ss_pred HHHHhcccchhhhhhhhHHHHHHHHHHhhC
Confidence 33222 44445567777777666556664
No 80
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.29 E-value=0.00029 Score=39.14 Aligned_cols=24 Identities=8% Similarity=0.019 Sum_probs=14.5
Q ss_pred HHHhhhhcCCCCcccHHHHHHHhc
Q psy16202 12 WMRLGMLVEAKGKVPVKVVSRTFA 35 (218)
Q Consensus 12 wl~~~fd~d~~G~I~~~el~~~l~ 35 (218)
++...||+|+||+|+.+|++.+|+
T Consensus 4 ~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 4 EAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCCHHHHHHHHH
Confidence 444456666666666666666554
No 81
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.23 E-value=0.00046 Score=36.90 Aligned_cols=25 Identities=16% Similarity=0.461 Sum_probs=21.1
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHH
Q psy16202 83 IEELFQSITKGKAETINLDQFITFL 107 (218)
Q Consensus 83 i~~iF~~~d~~~~g~it~~ef~~FL 107 (218)
|+.+|+.+|.|++|.|+.+||.+|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 5678899999999999999998874
No 82
>KOG0040|consensus
Probab=96.98 E-value=0.0054 Score=61.77 Aligned_cols=124 Identities=13% Similarity=0.221 Sum_probs=87.5
Q ss_pred HHhhhhcCCCCcccHHHHHHHhcCC----------CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH-----c
Q psy16202 13 MRLGMLVEAKGKVPVKVVSRTFASG----------KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK-----I 77 (218)
Q Consensus 13 l~~~fd~d~~G~I~~~el~~~l~~~----------~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~-----l 77 (218)
+...||++.+|+++.++++.+|++. ..+.+.++++..+ |.+.+|.++..+|..|+-. +
T Consensus 2258 ~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~v-------DP~r~G~Vsl~dY~afmi~~ETeNI 2330 (2399)
T KOG0040|consen 2258 MFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLV-------DPNRDGYVSLQDYMAFMISKETENI 2330 (2399)
T ss_pred HHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhc-------CCCCcCcccHHHHHHHHHhcccccc
Confidence 4456899999999999999999862 1235778888877 7788999999999999864 2
Q ss_pred CCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhc-chhhhhccCCcCHHHHHHH
Q psy16202 78 CPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYE-QNEEIRNEKSFSKDGLIRY 156 (218)
Q Consensus 78 ~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~-~~~~~~~~g~ls~~~F~~~ 156 (218)
....+|+.+|+.++.++ .+++..++..-|...|- +-|..-|+.|. +.........+.+.+|++-
T Consensus 2331 ~s~~eIE~AfraL~a~~-~yvtke~~~~~ltreqa--------------efc~s~m~~~~e~~~~~s~q~~l~y~dfv~s 2395 (2399)
T KOG0040|consen 2331 LSSEEIEDAFRALDAGK-PYVTKEELYQNLTREQA--------------EFCMSKMKPYAETSSGRSDQVALDYKDFVNS 2395 (2399)
T ss_pred cchHHHHHHHHHhhcCC-ccccHHHHHhcCCHHHH--------------HHHHHHhhhhcccccCCCccccccHHHHHHH
Confidence 34569999999999965 69999988765544432 12333344332 2100112356899999886
Q ss_pred Hc
Q psy16202 157 LM 158 (218)
Q Consensus 157 L~ 158 (218)
|+
T Consensus 2396 l~ 2397 (2399)
T KOG0040|consen 2396 LF 2397 (2399)
T ss_pred Hh
Confidence 65
No 83
>KOG0031|consensus
Probab=96.66 E-value=0.0092 Score=46.14 Aligned_cols=46 Identities=9% Similarity=0.197 Sum_probs=39.5
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHh
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTY 136 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~ 136 (218)
.|++++|..+|.+++|.|..++|+.+|...++. ++++++..+|++.
T Consensus 32 qEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~----------~~d~elDaM~~Ea 77 (171)
T KOG0031|consen 32 QEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKI----------ASDEELDAMMKEA 77 (171)
T ss_pred HHHHHHHHHHhccCCCcccHHHHHHHHHHcCCC----------CCHHHHHHHHHhC
Confidence 578999999999999999999999999999875 3777777777754
No 84
>KOG0751|consensus
Probab=96.43 E-value=0.022 Score=51.72 Aligned_cols=88 Identities=10% Similarity=0.243 Sum_probs=66.0
Q ss_pred hcCCCCcccHHHHHHHhc----CCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHH-HHHHHHHcC
Q psy16202 18 LVEAKGKVPVKVVSRTFA----SGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDI-EELFQSITK 92 (218)
Q Consensus 18 d~d~~G~I~~~el~~~l~----~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei-~~iF~~~d~ 92 (218)
++++.-.++.+++.+..- ..+..+++..++..+. |..++|.|+|+||+.|=..+|...-+ +.+|.-||.
T Consensus 46 e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~ia------D~tKDglisf~eF~afe~~lC~pDal~~~aFqlFDr 119 (694)
T KOG0751|consen 46 EKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIA------DQTKDGLISFQEFRAFESVLCAPDALFEVAFQLFDR 119 (694)
T ss_pred hhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhh------hhcccccccHHHHHHHHhhccCchHHHHHHHHHhcc
Confidence 456666788888765322 2233356677777663 77889999999999877777876544 678999999
Q ss_pred CCCCcccHHHHHHHHHHhc
Q psy16202 93 GKAETINLDQFITFLNEKQ 111 (218)
Q Consensus 93 ~~~g~it~~ef~~FL~~~Q 111 (218)
.++|.+|.+++.+.+.+.+
T Consensus 120 ~~~~~vs~~~~~~if~~t~ 138 (694)
T KOG0751|consen 120 LGNGEVSFEDVADIFGQTN 138 (694)
T ss_pred cCCCceehHHHHHHHhccc
Confidence 9999999999999887764
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.41 E-value=0.0029 Score=33.76 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=17.9
Q ss_pred HHHhhhhcCCCCcccHHHHHHHh
Q psy16202 12 WMRLGMLVEAKGKVPVKVVSRTF 34 (218)
Q Consensus 12 wl~~~fd~d~~G~I~~~el~~~l 34 (218)
|++ .+|+|+||+|+..|+.+++
T Consensus 4 ~F~-~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 4 AFQ-QFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHH-HHTTTSSSEEEHHHHHHHH
T ss_pred HHH-HHcCCCCCcCCHHHHHHHC
Confidence 444 5799999999999998854
No 86
>KOG2562|consensus
Probab=96.39 E-value=0.015 Score=52.31 Aligned_cols=111 Identities=14% Similarity=0.311 Sum_probs=62.0
Q ss_pred hcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCC-CCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCCCC
Q psy16202 18 LVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIE-PADFTFDKFYELYHKICPRNDIEELFQSITKGKAE 96 (218)
Q Consensus 18 d~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~-~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g 96 (218)
+.-+.|+|+.+++.+..- -..+.++.++- |.++ ...++++.|...|. -|-.+|+|++|
T Consensus 235 nrs~tG~iti~el~~snl----l~~l~~l~eEe-------d~nq~~~~FS~e~f~viy~----------kFweLD~Dhd~ 293 (493)
T KOG2562|consen 235 NRSRTGRITIQELLRSNL----LDALLELDEEE-------DINQVTRYFSYEHFYVIYC----------KFWELDTDHDG 293 (493)
T ss_pred CCccCCceeHHHHHHhHH----HHHHHHHHHHh-------hhhhhhhheeHHHHHHHHH----------HHhhhcccccc
Confidence 677899999999976211 12333333332 1221 12445665554433 35667788888
Q ss_pred cccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCC
Q psy16202 97 TINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDEN 162 (218)
Q Consensus 97 ~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n 162 (218)
.|+.++|.++-... + |.-=+..|+.........+.+|.|++++|++|+++.++
T Consensus 294 lidk~~L~ry~d~t-----l--------t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~ 346 (493)
T KOG2562|consen 294 LIDKEDLKRYGDHT-----L--------TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEED 346 (493)
T ss_pred ccCHHHHHHHhccc-----h--------hhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhcc
Confidence 88888888774322 1 22224445542111111235677888888888887665
No 87
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.29 E-value=0.0047 Score=34.50 Aligned_cols=24 Identities=4% Similarity=-0.098 Sum_probs=18.4
Q ss_pred HHHhhhhcCCCCcccHHHHHHHhc
Q psy16202 12 WMRLGMLVEAKGKVPVKVVSRTFA 35 (218)
Q Consensus 12 wl~~~fd~d~~G~I~~~el~~~l~ 35 (218)
-+...+|+|++|.|+.+|++.+|+
T Consensus 4 ~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 4 EAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHH
Confidence 345567899999999999988876
No 88
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.24 E-value=0.0024 Score=47.17 Aligned_cols=56 Identities=11% Similarity=0.129 Sum_probs=33.6
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHHHhcC-CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHH
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSRTFAS-GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFY 71 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~~l~~-~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~ 71 (218)
..+|....+|+|+||.|+.+|+..+... .+.+.=++.+++.+ |.++++.|+++|+.
T Consensus 55 ~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~C-------D~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 55 VVHWKFCQLDRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSC-------DVNKDGKISLDEWC 111 (113)
T ss_dssp HHHHHHHHH--T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH--------TT-SSSEEHHHHH
T ss_pred hhhhhHhhhcCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHc-------CCCCCCCCCHHHHc
Confidence 3557777778888888888887765443 23334466677777 67777788887775
No 89
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.23 E-value=0.013 Score=36.80 Aligned_cols=47 Identities=6% Similarity=0.251 Sum_probs=37.8
Q ss_pred cccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 97 TINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 97 ~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
.|+..|++++|+...-+ ++++.|..|+++.+.+ ++|.+..++|..|.
T Consensus 1 kmsf~Evk~lLk~~NI~----------~~~~yA~~LFq~~D~s----~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIE----------MDDEYARQLFQECDKS----QSGRLEGEEFEEFY 47 (51)
T ss_dssp EBEHHHHHHHHHHTT--------------HHHHHHHHHHH-SS----SSSEBEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccC----------cCHHHHHHHHHHhccc----CCCCccHHHHHHHH
Confidence 37899999999998643 5888999999999987 78999999999885
No 90
>KOG0030|consensus
Probab=96.09 E-value=0.019 Score=43.70 Aligned_cols=67 Identities=15% Similarity=0.235 Sum_probs=53.7
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
++.+++|.-||..++|.|+....-+.|+..+..| |..++.+.+.++.++.. +-.+++|+.|+-.+.+
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nP----------T~aeV~k~l~~~~~~~~--~~~rl~FE~fLpm~q~ 77 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNP----------TNAEVLKVLGQPKRREM--NVKRLDFEEFLPMYQQ 77 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhcCCC----------cHHHHHHHHcCcccchh--hhhhhhHHHHHHHHHH
Confidence 6889999999999999999999999999998766 78888888887776522 1246777777776554
No 91
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.08 E-value=0.022 Score=50.89 Aligned_cols=54 Identities=9% Similarity=0.118 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 40 EKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 40 ~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
+..+..+|+.+ |.+++|.|+.+||.. +..+|..+|.|++|.|+.+||..++...
T Consensus 333 ~~~l~~aF~~~-------D~dgdG~Is~~E~~~----------~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 333 THAAQEIFRLY-------DLDGDGFITREEWLG----------SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred hHHHHHHHHHh-------CCCCCCcCcHHHHHH----------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 35667777776 889999999999953 5788999999999999999999998754
No 92
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.03 E-value=0.02 Score=51.15 Aligned_cols=49 Identities=8% Similarity=-0.059 Sum_probs=40.5
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK 76 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~ 76 (218)
.++...+|.|++|.|+..|+.. +..+|+.+ |.+++|.|+++||..++..
T Consensus 337 ~~aF~~~D~dgdG~Is~~E~~~----------~~~~F~~~-------D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 337 QEIFRLYDLDGDGFITREEWLG----------SDAVFDAL-------DLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHhCCCCCCcCcHHHHHH----------HHHHHHHh-------CCCCCCCCcHHHHHHHHHH
Confidence 4556667999999999999842 45678888 7899999999999998764
No 93
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.79 E-value=0.016 Score=30.21 Aligned_cols=28 Identities=21% Similarity=0.501 Sum_probs=21.6
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHH
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNE 109 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~ 109 (218)
++..+|+.++.+++|.|+..+|..+++.
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 3667888888887788888888887754
No 94
>KOG0377|consensus
Probab=95.78 E-value=0.064 Score=48.19 Aligned_cols=86 Identities=17% Similarity=0.285 Sum_probs=64.8
Q ss_pred cCCCCcccHHHHHHHhcCCC---------------cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC-----
Q psy16202 19 VEAKGKVPVKVVSRTFASGK---------------TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC----- 78 (218)
Q Consensus 19 ~d~~G~I~~~el~~~l~~~~---------------~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~----- 78 (218)
.+.+|++..++-.+.+.... ....+..+|..+ |.+++|.|+.+||...+..+.
T Consensus 510 ~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLYr~ks~LetiF~~i-------D~D~SG~isldEF~~a~~l~~sh~~~ 582 (631)
T KOG0377|consen 510 GSDDGKVEYKSTLDNLDTEVILEEAGSSLVETLYRNKSSLETIFNII-------DADNSGEISLDEFRTAWKLLSSHMNG 582 (631)
T ss_pred CCcCcceehHhHHHHhhhhhHHHHHHhHHHHHHHhchhhHHHHHHHh-------ccCCCCceeHHHHHHHHHHHHhhcCC
Confidence 45678888777666554321 123466677777 889999999999999876542
Q ss_pred --CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhc
Q psy16202 79 --PRNDIEELFQSITKGKAETINLDQFITFLNEKQ 111 (218)
Q Consensus 79 --~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q 111 (218)
+..+|.++=+.+|-+++|.|+..||.+.++-..
T Consensus 583 ~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvd 617 (631)
T KOG0377|consen 583 AISDDEILELARSMDLNKDGKIDLNEFLEAFRLVD 617 (631)
T ss_pred CcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhc
Confidence 356888999999999999999999998776553
No 95
>KOG0040|consensus
Probab=95.67 E-value=0.016 Score=58.60 Aligned_cols=97 Identities=16% Similarity=0.272 Sum_probs=72.8
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
|..-+|+-||.+++|.++.++|+.-|+..|.+-..-|-- -.+-+.++++.-.+|+ .+|.+++.+++.||.+++
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~---~~~p~fe~~ld~vDP~----r~G~Vsl~dY~afmi~~E 2326 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEG---EPEPEFEEILDLVDPN----RDGYVSLQDYMAFMISKE 2326 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccC---CCChhHHHHHHhcCCC----CcCcccHHHHHHHHHhcc
Confidence 567789999999999999999999999998753110000 0111578888889997 789999999999999998
Q ss_pred C-CCccc-----------------cccccccccCCccccccc
Q psy16202 162 N-APVFL-----------------DRLDFYMDMDQPLAHYYI 185 (218)
Q Consensus 162 n-~~~~~-----------------~~~~~~~dm~~Pls~YfI 185 (218)
. +|.+. .+...|+.|++--..||+
T Consensus 2327 TeNI~s~~eIE~AfraL~a~~~yvtke~~~~~ltreqaefc~ 2368 (2399)
T KOG0040|consen 2327 TENILSSEEIEDAFRALDAGKPYVTKEELYQNLTREQAEFCM 2368 (2399)
T ss_pred cccccchHHHHHHHHHhhcCCccccHHHHHhcCCHHHHHHHH
Confidence 4 23222 223348899999999997
No 96
>KOG4666|consensus
Probab=95.57 E-value=0.016 Score=50.06 Aligned_cols=120 Identities=9% Similarity=0.084 Sum_probs=80.2
Q ss_pred CCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCc----hHHHHHHHHHcCCCCCc
Q psy16202 22 KGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPR----NDIEELFQSITKGKAET 97 (218)
Q Consensus 22 ~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r----~ei~~iF~~~d~~~~g~ 97 (218)
.|+|...|...-++-. ..+.+..+|.-+ |..++|.++|-|.+.-..-+|.. .-|+-+|+.|+.+.+|.
T Consensus 241 g~~igi~efa~~l~vp-vsd~l~~~f~LF-------de~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~ 312 (412)
T KOG4666|consen 241 GPDIGIVEFAVNLRVP-VSDKLAPTFMLF-------DEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGI 312 (412)
T ss_pred CCCcceeEeeeeeecc-hhhhhhhhhhee-------cCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccc
Confidence 3444444444333321 124566666666 78889999999988766666642 34677899999999999
Q ss_pred ccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCCCC
Q psy16202 98 INLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDENAP 164 (218)
Q Consensus 98 it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n~~ 164 (218)
++..+|--.|+..-+.+.+ ++-.++...+.. .++.|++++|.+|+....|-+
T Consensus 313 ~ge~~ls~ilq~~lgv~~l-----------~v~~lf~~i~q~----d~~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 313 SGEHILSLILQVVLGVEVL-----------RVPVLFPSIEQK----DDPKIYASNFRKFAATEPNLA 364 (412)
T ss_pred cchHHHHHHHHHhcCccee-----------eccccchhhhcc----cCcceeHHHHHHHHHhCchhh
Confidence 9999999999887665422 122333333332 578899999999988766543
No 97
>KOG4251|consensus
Probab=95.50 E-value=0.097 Score=43.65 Aligned_cols=130 Identities=16% Similarity=0.235 Sum_probs=72.4
Q ss_pred hcCCCCcccHHHHHHHhcC--CCcHHHHHHHH----------------HHhCCCCCCCCCCC-CCCCCHHHHHHHHHHcC
Q psy16202 18 LVEAKGKVPVKVVSRTFAS--GKTEKLVYQTM----------------AELGLPSGKNDVIE-PADFTFDKFYELYHKIC 78 (218)
Q Consensus 18 d~d~~G~I~~~el~~~l~~--~~~~~~i~~~~----------------~~~~~~~~k~d~~~-~g~l~f~eF~~~~~~l~ 78 (218)
|.|+||.|+..|.+--+.+ +.+++++...+ +...-.-.+.|... +-.++-+||..|.+.--
T Consensus 150 DpdgDGhvsWdEykvkFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEh 229 (362)
T KOG4251|consen 150 DPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEH 229 (362)
T ss_pred CCCCCCceehhhhhhHHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHh
Confidence 6899999999999744432 33333332222 11100000111111 12356689988876422
Q ss_pred C----chHHHHHHHHHcCCCCCcccHHHHHHHH----HHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCH
Q psy16202 79 P----RNDIEELFQSITKGKAETINLDQFITFL----NEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSK 150 (218)
Q Consensus 79 ~----r~ei~~iF~~~d~~~~g~it~~ef~~FL----~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~ 150 (218)
. +.-+.+|.+.+|++++..++..+|.... .+.|++. +.+..++.-.++|+.-.....+|.+|+
T Consensus 230 SrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqd---------iddnwvkdRkkEFeElIDsNhDGivTa 300 (362)
T KOG4251|consen 230 SRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQD---------IDDNWVKDRKKEFEELIDSNHDGIVTA 300 (362)
T ss_pred hhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccc---------hHHHHHHHHHHHHHHHhhcCCccceeH
Confidence 2 3446788889999998899999998643 2234332 344444444444433222336788888
Q ss_pred HHHHHH
Q psy16202 151 DGLIRY 156 (218)
Q Consensus 151 ~~F~~~ 156 (218)
++...|
T Consensus 301 eELe~y 306 (362)
T KOG4251|consen 301 EELEDY 306 (362)
T ss_pred HHHHhh
Confidence 887776
No 98
>KOG0046|consensus
Probab=95.09 E-value=0.058 Score=49.32 Aligned_cols=60 Identities=15% Similarity=0.313 Sum_probs=47.3
Q ss_pred HHhhh---hcCCCCcccHHHHHHHhcCC--C----cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCc
Q psy16202 13 MRLGM---LVEAKGKVPVKVVSRTFASG--K----TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPR 80 (218)
Q Consensus 13 l~~~f---d~d~~G~I~~~el~~~l~~~--~----~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r 80 (218)
++.+| | |++|+|++.++..+|.+. . ..+++++++.+. +.+.+|.++|++|+..|..+..+
T Consensus 21 l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~-------~~~~~g~v~fe~f~~~~~~l~s~ 89 (627)
T KOG0046|consen 21 LKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEV-------GVDADGRVEFEEFVGIFLNLKSK 89 (627)
T ss_pred HHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhcc-------CCCcCCccCHHHHHHHHHhhhhh
Confidence 44445 5 999999999999999863 2 257788888877 56778999999999988776554
No 99
>KOG0751|consensus
Probab=95.09 E-value=0.1 Score=47.51 Aligned_cols=88 Identities=15% Similarity=0.228 Sum_probs=64.7
Q ss_pred HhhhhcCCCCcccHHHHHHHhcCCC---------cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHH
Q psy16202 14 RLGMLVEAKGKVPVKVVSRTFASGK---------TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIE 84 (218)
Q Consensus 14 ~~~fd~d~~G~I~~~el~~~l~~~~---------~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~ 84 (218)
.+.||+.++|.++.+++...+.... +.+-|+..|.. +..-.++|.+|.++++.... +.-+
T Consensus 114 FqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~----------~~~r~~ny~~f~Q~lh~~~~-E~~~ 182 (694)
T KOG0751|consen 114 FQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGD----------IRKRHLNYAEFTQFLHEFQL-EHAE 182 (694)
T ss_pred HHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhh----------HHHHhccHHHHHHHHHHHHH-HHHH
Confidence 3457888888899888888887521 12344444432 23456899999999887543 3467
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHhcC
Q psy16202 85 ELFQSITKGKAETINLDQFITFLNEKQR 112 (218)
Q Consensus 85 ~iF~~~d~~~~g~it~~ef~~FL~~~Q~ 112 (218)
++|+..+..++|.||.-+|+..+.+.-.
T Consensus 183 qafr~~d~~~ng~is~Ldfq~imvt~~~ 210 (694)
T KOG0751|consen 183 QAFREKDKAKNGFISVLDFQDIMVTIRI 210 (694)
T ss_pred HHHHHhcccCCCeeeeechHhhhhhhhh
Confidence 8999999999999999999998887743
No 100
>KOG4666|consensus
Probab=95.04 E-value=0.1 Score=45.15 Aligned_cols=94 Identities=14% Similarity=0.086 Sum_probs=70.6
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcC----CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCch--HHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFAS----GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRN--DIE 84 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~----~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~--ei~ 84 (218)
.-+...||.+++|.++.+|....+.- ..++..|+-.|+.+ +...+|.+.=.+|.-+++....-+ .+-
T Consensus 262 ~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f-------~v~eDg~~ge~~ls~ilq~~lgv~~l~v~ 334 (412)
T KOG4666|consen 262 APTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRF-------SVAEDGISGEHILSLILQVVLGVEVLRVP 334 (412)
T ss_pred hhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhc-------ccccccccchHHHHHHHHHhcCcceeecc
Confidence 34556689999999999999887765 24566777778887 456667776666666665544333 356
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHhc
Q psy16202 85 ELFQSITKGKAETINLDQFITFLNEKQ 111 (218)
Q Consensus 85 ~iF~~~d~~~~g~it~~ef~~FL~~~Q 111 (218)
.+|...+...+|.|+.++|++|...+.
T Consensus 335 ~lf~~i~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 335 VLFPSIEQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred ccchhhhcccCcceeHHHHHHHHHhCc
Confidence 789999988889999999999998764
No 101
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.01 E-value=0.056 Score=39.31 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCC
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDE 161 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~ 161 (218)
....+|...+. ++|.|+-++.+.||.+-+ ++.+.+.+|..-.|.+ ++|.++.++|+--|.=
T Consensus 11 ~y~~~F~~l~~-~~g~isg~~a~~~f~~S~------------L~~~~L~~IW~LaD~~----~dG~L~~~EF~iAm~L-- 71 (104)
T PF12763_consen 11 KYDQIFQSLDP-QDGKISGDQAREFFMKSG------------LPRDVLAQIWNLADID----NDGKLDFEEFAIAMHL-- 71 (104)
T ss_dssp HHHHHHHCTSS-STTEEEHHHHHHHHHHTT------------SSHHHHHHHHHHH-SS----SSSEEEHHHHHHHHHH--
T ss_pred HHHHHHHhcCC-CCCeEeHHHHHHHHHHcC------------CCHHHHHHHHhhhcCC----CCCcCCHHHHHHHHHH--
Confidence 45678887775 458999999999998775 3567778888877776 7899999999865431
Q ss_pred CCCccccccccccccCCccccccccCCCc
Q psy16202 162 NAPVFLDRLDFYMDMDQPLAHYYINSSHN 190 (218)
Q Consensus 162 n~~~~~~~~~~~~dm~~Pls~YfI~SSHN 190 (218)
+......-...+-..|+.+.|.||.-
T Consensus 72 ---i~~~~~~~~~~lP~~LP~~L~p~s~~ 97 (104)
T PF12763_consen 72 ---INRKLNGNGKPLPSSLPPSLIPPSKR 97 (104)
T ss_dssp ---HHHHHHHTTS---SSSSGGGSSSCG-
T ss_pred ---HHHHhcCCCCCCchhcCHHHCCCCcc
Confidence 11000001234566677888888763
No 102
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.60 E-value=0.07 Score=36.71 Aligned_cols=61 Identities=13% Similarity=0.256 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC-----CchHHHHHHHHHcCC----CCCcccHHHHHHHHHHh
Q psy16202 42 LVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC-----PRNDIEELFQSITKG----KAETINLDQFITFLNEK 110 (218)
Q Consensus 42 ~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~-----~r~ei~~iF~~~d~~----~~g~it~~ef~~FL~~~ 110 (218)
+|..+|+.+. . +.+.++.++|.+|+..-. +..++..++..|..+ ..+.||.++|.+||...
T Consensus 1 ei~~if~~ys-------~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYS-------S-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHC-------T-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHh-------C-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 4677888872 2 577899999999997532 356788888888543 34799999999999765
No 103
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=94.28 E-value=0.23 Score=35.10 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCcc-ccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCC
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPR-LNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSD 160 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~-~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~ 160 (218)
..+.+|+.++ |++|.|+...|..||++...-|. +.|...=...+..++..++... ....|+.+.|+.+|+++
T Consensus 4 KyRylFslis-d~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~------~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 4 KYRYLFSLIS-DSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ------LSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHS--TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT------T-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHHc-CCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC------CCCccCHHHHHHHHHhC
Confidence 4678899994 55589999999999999865443 3333211124455566665432 35689999999999997
Q ss_pred CCCCc
Q psy16202 161 ENAPV 165 (218)
Q Consensus 161 ~n~~~ 165 (218)
..+++
T Consensus 77 Pq~lV 81 (90)
T PF09069_consen 77 PQSLV 81 (90)
T ss_dssp -TTTT
T ss_pred CCeee
Confidence 55544
No 104
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=94.22 E-value=0.14 Score=37.15 Aligned_cols=49 Identities=18% Similarity=0.286 Sum_probs=28.9
Q ss_pred CCCCcccHHHHHHHhcC-CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy16202 20 EAKGKVPVKVVSRTFAS-GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYH 75 (218)
Q Consensus 20 d~~G~I~~~el~~~l~~-~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~ 75 (218)
.++|.|+-.+++.+|.. +.....+.++-.-. |.+++|.|+++||.-.++
T Consensus 21 ~~~g~isg~~a~~~f~~S~L~~~~L~~IW~La-------D~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 21 PQDGKISGDQAREFFMKSGLPRDVLAQIWNLA-------DIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp SSTTEEEHHHHHHHHHHTTSSHHHHHHHHHHH--------SSSSSEEEHHHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHcCCCHHHHHHHHhhh-------cCCCCCcCCHHHHHHHHH
Confidence 35666777776666554 33445556665554 566666777777765554
No 105
>KOG0046|consensus
Probab=93.37 E-value=0.24 Score=45.42 Aligned_cols=65 Identities=8% Similarity=0.215 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
++.+.|.+.+ ++.|+++..++...+.+... +.. ....+++++++.+..++ .+|.+++++|+...+
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~-~~g------~~~~eei~~~l~~~~~~----~~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKL-PLG------YFVREEIKEILGEVGVD----ADGRVEFEEFVGIFL 84 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcc-ccc------chhHHHHHHHHhccCCC----cCCccCHHHHHHHHH
Confidence 4677788888 77799999999999988753 211 13578899999999887 789999999999533
No 106
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=92.95 E-value=0.43 Score=37.08 Aligned_cols=65 Identities=9% Similarity=0.175 Sum_probs=46.1
Q ss_pred HHHHHHHHc---CCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 83 IEELFQSIT---KGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 83 i~~iF~~~d---~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
|+.+|..|+ ......|+...|.+++++.+=-. ..+|..++.-++.++-.. +...|+|++|...|-
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d-------~k~t~tdvDiiF~Kvk~k----~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIID-------KKLTSTDVDIIFSKVKAK----GARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS---------SSS-HHHHHHHHHHHT-S----S-SEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCC-------CCCchHHHHHHHHHhhcC----CCcccCHHHHHHHHH
Confidence 467888884 23335899999999999986321 226888999999987543 445699999998875
No 107
>KOG4065|consensus
Probab=92.58 E-value=0.38 Score=35.58 Aligned_cols=76 Identities=8% Similarity=0.171 Sum_probs=53.8
Q ss_pred chHHH-HHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHH
Q psy16202 80 RNDIE-ELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIR 155 (218)
Q Consensus 80 r~ei~-~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~ 155 (218)
+++++ .-|...|-|+++.++--|+.+.++........+---.|+.++.+...||...-.+.+.+++|.|+|-+|++
T Consensus 65 peqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 65 PEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred HHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 34443 34788888888999999998888755321111111136678888999998877776777899999999975
No 108
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.27 E-value=0.21 Score=25.57 Aligned_cols=19 Identities=11% Similarity=0.132 Sum_probs=9.4
Q ss_pred hhhcCCCCcccHHHHHHHh
Q psy16202 16 GMLVEAKGKVPVKVVSRTF 34 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l 34 (218)
.+|.+++|.|+..++..++
T Consensus 8 ~~d~~~~g~i~~~e~~~~~ 26 (29)
T smart00054 8 LFDKDGDGKIDFEEFKDLL 26 (29)
T ss_pred HHCCCCCCcEeHHHHHHHH
Confidence 3445555555555554444
No 109
>KOG0038|consensus
Probab=92.22 E-value=0.81 Score=35.32 Aligned_cols=89 Identities=7% Similarity=0.075 Sum_probs=61.4
Q ss_pred HHhhhhcCCCCcccHHHHHHHhcCC----CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC----chHH-
Q psy16202 13 MRLGMLVEAKGKVPVKVVSRTFASG----KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP----RNDI- 83 (218)
Q Consensus 13 l~~~fd~d~~G~I~~~el~~~l~~~----~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~----r~ei- 83 (218)
+-+.|..||.|.+++.++..++.-. +.+-.++-+|+-. |-++++.|.-+.....+..|+. .+|+
T Consensus 76 i~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIY-------Dfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~ 148 (189)
T KOG0038|consen 76 ICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIY-------DFDGDEFIGHDDLEKTLTSLTRDELSDEEVE 148 (189)
T ss_pred HHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEe-------ecCCCCcccHHHHHHHHHHHhhccCCHHHHH
Confidence 3356788999999999999887631 2122233334444 6677888887777776666542 2343
Q ss_pred ---HHHHHHHcCCCCCcccHHHHHHHHH
Q psy16202 84 ---EELFQSITKGKAETINLDQFITFLN 108 (218)
Q Consensus 84 ---~~iF~~~d~~~~g~it~~ef~~FL~ 108 (218)
+++-...|.|++|.++..||.....
T Consensus 149 ~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 149 LICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 4566677889999999999988654
No 110
>KOG1707|consensus
Probab=91.64 E-value=1.7 Score=40.65 Aligned_cols=131 Identities=11% Similarity=0.176 Sum_probs=80.7
Q ss_pred hhHHHHHHHHh--hhhcCCCCcccHHHHH----HHhcCCCcH---HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy16202 5 LMLQLLSWMRL--GMLVEAKGKVPVKVVS----RTFASGKTE---KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYH 75 (218)
Q Consensus 5 ~~~~~~~wl~~--~fd~d~~G~I~~~el~----~~l~~~~~~---~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~ 75 (218)
+|..+..|.|. ..|.|.||.++-.|+- ++|...... +.++..+++. .| +.-....++..-|+-+..
T Consensus 190 kp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~-~p----~gv~~~~ltl~GFLfL~~ 264 (625)
T KOG1707|consen 190 KPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEI-CP----DGVYERGLTLPGFLFLNT 264 (625)
T ss_pred cHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhh-cC----chhhhccccccchHHHHH
Confidence 56677778774 2389999999999984 556554332 4555555553 11 222345667777765433
Q ss_pred HcCCc---------------------------------------------hHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 76 KICPR---------------------------------------------NDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 76 ~l~~r---------------------------------------------~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
....| .-+..+|..||.|++|.++.+||.......
T Consensus 265 lfiergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~ 344 (625)
T KOG1707|consen 265 LFIERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTA 344 (625)
T ss_pred HHHHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhC
Confidence 21100 124688999999999999999999998887
Q ss_pred cCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHH
Q psy16202 111 QRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRY 156 (218)
Q Consensus 111 Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~ 156 (218)
..-|+... .++ +. ......|.+++.||+..
T Consensus 345 P~~pW~~~-~~~-----~~----------t~~~~~G~ltl~g~l~~ 374 (625)
T KOG1707|consen 345 PGSPWTSS-PYK-----DS----------TVKNERGWLTLNGFLSQ 374 (625)
T ss_pred CCCCCCCC-ccc-----cc----------ceecccceeehhhHHHH
Confidence 65553210 000 00 00124688999988765
No 111
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=91.11 E-value=0.47 Score=34.90 Aligned_cols=58 Identities=19% Similarity=0.286 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC-CchHHHHHHHHHcCCCCCcccHHHHH
Q psy16202 40 EKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC-PRNDIEELFQSITKGKAETINLDQFI 104 (218)
Q Consensus 40 ~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~-~r~ei~~iF~~~d~~~~g~it~~ef~ 104 (218)
...|.=.|..+ |.+++|.|+-.|...+...|. .+.-+...|+.-|.++++.||..|..
T Consensus 53 ~~~~~W~F~~L-------D~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 53 KRVVHWKFCQL-------DRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp HHHHHHHHHHH---------T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhhhhhhHhhh-------cCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence 35677779998 888999999999887766553 34558888999999999999999864
No 112
>PLN02952 phosphoinositide phospholipase C
Probab=88.06 E-value=3.7 Score=38.86 Aligned_cols=82 Identities=12% Similarity=0.156 Sum_probs=56.2
Q ss_pred CCCCcccHHHHHHHhcCC-----CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-----chHHHHHHHH
Q psy16202 20 EAKGKVPVKVVSRTFASG-----KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP-----RNDIEELFQS 89 (218)
Q Consensus 20 d~~G~I~~~el~~~l~~~-----~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~-----r~ei~~iF~~ 89 (218)
++.|+++.+++..+.+.. ....+|..+|.++. .+.+.++.++|..|+..... ..+...+|..
T Consensus 12 ~~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~--------~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~ 83 (599)
T PLN02952 12 NDSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFS--------VGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEE 83 (599)
T ss_pred ccCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHh--------CCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 346899999997554432 23578999999872 23468999999999976432 2345666665
Q ss_pred HcCC-------CCCcccHHHHHHHHHH
Q psy16202 90 ITKG-------KAETINLDQFITFLNE 109 (218)
Q Consensus 90 ~d~~-------~~g~it~~ef~~FL~~ 109 (218)
+... ....++.+.|.+||..
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 84 VINRRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HHhhccccccccccCcCHHHHHHHHcC
Confidence 4211 2246999999999963
No 113
>KOG4065|consensus
Probab=87.58 E-value=2.1 Score=31.67 Aligned_cols=58 Identities=7% Similarity=0.121 Sum_probs=40.1
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcC-------C------CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFAS-------G------KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYE 72 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~-------~------~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~ 72 (218)
+|+. ..|.|++|.|+=-||.+++.- + .++.++..++..+- ...|.+++|.|+|-||.+
T Consensus 71 HYF~-MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL---~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFS-MHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVL---DDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhh-hhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHh---cccccCCCceeeHHHHHh
Confidence 3443 358999999999999887742 1 25667777776541 112667789999999975
No 114
>KOG0169|consensus
Probab=86.58 E-value=5.5 Score=38.37 Aligned_cols=93 Identities=18% Similarity=0.416 Sum_probs=68.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC---CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCcccc
Q psy16202 41 KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC---PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLN 117 (218)
Q Consensus 41 ~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~---~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~ 117 (218)
.-+..++++. |++.+|.++|++-..+...+. ....+..+|+..+...++.+...++.+|.......|
T Consensus 136 ~wi~~~~~~a-------d~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp--- 205 (746)
T KOG0169|consen 136 HWIHSIFQEA-------DKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP--- 205 (746)
T ss_pred HHHHHHHHHH-------ccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc---
Confidence 4577888887 888999999999998887653 334567788887766678999999999988775432
Q ss_pred ccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 118 EILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 118 ~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
++..++.+|.. +.+.++.+++.+||-
T Consensus 206 ----------ev~~~f~~~s~-----~~~~ls~~~L~~Fl~ 231 (746)
T KOG0169|consen 206 ----------EVYFLFVQYSH-----GKEYLSTDDLLRFLE 231 (746)
T ss_pred ----------hHHHHHHHHhC-----CCCccCHHHHHHHHH
Confidence 56667766654 245666666666654
No 115
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=86.11 E-value=1.4 Score=26.70 Aligned_cols=30 Identities=17% Similarity=0.402 Sum_probs=23.6
Q ss_pred HHHHHHHHHcC--CCCCcccHHHHHHHHHHhc
Q psy16202 82 DIEELFQSITK--GKAETINLDQFITFLNEKQ 111 (218)
Q Consensus 82 ei~~iF~~~d~--~~~g~it~~ef~~FL~~~Q 111 (218)
.|..+|.+|+. +....++..||+..|.++=
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~El 38 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKEL 38 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHHH
Confidence 47789999983 2236899999999998763
No 116
>KOG3555|consensus
Probab=85.71 E-value=1.3 Score=38.88 Aligned_cols=57 Identities=9% Similarity=0.106 Sum_probs=35.9
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYH 75 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~ 75 (218)
.|++..+|+|.||.++..||... .....|.=|+.+|..+ |...+|.|+-.|+..-+.
T Consensus 253 gWMFnklD~N~Dl~Ld~sEl~~I-~ldknE~CikpFfnsC-------D~~kDg~iS~~EWC~CF~ 309 (434)
T KOG3555|consen 253 GWMFNKLDTNYDLLLDQSELRAI-ELDKNEACIKPFFNSC-------DTYKDGSISTNEWCYCFQ 309 (434)
T ss_pred hhhhhccccccccccCHHHhhhh-hccCchhHHHHHHhhh-------cccccCccccchhhhhhc
Confidence 47777777777777777776553 3344455566666666 555567777777765443
No 117
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=85.70 E-value=0.75 Score=30.82 Aligned_cols=64 Identities=16% Similarity=0.286 Sum_probs=38.4
Q ss_pred CchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 79 PRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 79 ~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
+.++|.++|+.++.++ ++||.++|++-|...|- +-|.+-|..+.........+.+++..|++-|
T Consensus 4 s~eqv~~aFr~lA~~K-pyVT~~dLr~~l~pe~a--------------ey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 4 SAEQVEEAFRALAGGK-PYVTEEDLRRSLTPEQA--------------EYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp TCHHHHHHHHHHCTSS-SCEEHHHHHHHS-CCCH--------------HHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred CHHHHHHHHHHHHcCC-CcccHHHHHHHcCcHHH--------------HHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 4578999999996665 79999999998865542 2333333333311111133668888887543
No 118
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=85.21 E-value=0.95 Score=35.82 Aligned_cols=30 Identities=20% Similarity=0.436 Sum_probs=26.3
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
...++||.+|++.+.+.||..|+.+.++..
T Consensus 96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~n 125 (174)
T PF05042_consen 96 QKFEEIFSKYAKTGPDALTLRELWRMLKGN 125 (174)
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHhc
Confidence 568999999998877899999999998764
No 119
>KOG0035|consensus
Probab=79.58 E-value=4.3 Score=39.91 Aligned_cols=89 Identities=13% Similarity=0.078 Sum_probs=62.9
Q ss_pred HHHhhhhcCCCCcccHHHHHHHhcCC-C-cH---HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHH----cCCchH
Q psy16202 12 WMRLGMLVEAKGKVPVKVVSRTFASG-K-TE---KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHK----ICPRND 82 (218)
Q Consensus 12 wl~~~fd~d~~G~I~~~el~~~l~~~-~-~~---~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~----l~~r~e 82 (218)
-+...|+....|.+++.++.++|... . ++ .-+.+.+.-+ ++.|.+..|.++|.+|..++.+ +.+...
T Consensus 751 Ale~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lv----n~~n~l~~~qv~~~e~~ddl~R~~e~l~~~~r 826 (890)
T KOG0035|consen 751 ALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLV----NKKNPLIQGQVQLLEFEDDLEREYEDLDTELR 826 (890)
T ss_pred HHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHH----hccCcccccceeHHHHHhHhhhhhhhhcHHHH
Confidence 34455678888899999999988763 2 22 2244444433 2335566789999999998864 233456
Q ss_pred HHHHHHHHcCCCCCcccHHHHHH
Q psy16202 83 IEELFQSITKGKAETINLDQFIT 105 (218)
Q Consensus 83 i~~iF~~~d~~~~g~it~~ef~~ 105 (218)
+...|..+.+++. ++..+||.+
T Consensus 827 ~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 827 AILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred HHHHHHHHHcchh-HHHHHHHHh
Confidence 7788999988875 899999988
No 120
>KOG1955|consensus
Probab=73.85 E-value=8.5 Score=35.52 Aligned_cols=69 Identities=14% Similarity=0.216 Sum_probs=51.6
Q ss_pred hhhhhHHHHHHHHhhh---hcCCCCcccHHHHHHHhcCCC-cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 2 WFVLMLQLLSWMRLGM---LVEAKGKVPVKVVSRTFASGK-TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 2 ~~~~~~~~~~wl~~~f---d~d~~G~I~~~el~~~l~~~~-~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
|=+-.++|+-|.. +| ..|-+|.|+=.-.+.+|.+.+ .-.++..|-+-. |.+.+|.|+.+||+..|+.+
T Consensus 223 w~IT~EQReYYvn-QFrtvQpDp~gfisGsaAknFFtKSklpi~ELshIWeLs-------D~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 223 WQITPEQREYYVN-QFRTVQPDPHGFISGSAAKNFFTKSKLPIEELSHIWELS-------DVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred cccCHHHHHHHHh-hhhcccCCcccccccHHHHhhhhhccCchHHHHHHHhhc-------ccCccccccHHHHHhhHhhe
Confidence 5556777875555 46 458889999999999887643 234666666654 78889999999999999875
Q ss_pred C
Q psy16202 78 C 78 (218)
Q Consensus 78 ~ 78 (218)
.
T Consensus 295 V 295 (737)
T KOG1955|consen 295 V 295 (737)
T ss_pred e
Confidence 4
No 121
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=72.15 E-value=7.7 Score=23.70 Aligned_cols=36 Identities=19% Similarity=0.438 Sum_probs=19.6
Q ss_pred ccHHHHHHHHHHhcCCccccccccccCCHHHHHHHH
Q psy16202 98 INLDQFITFLNEKQRDPRLNEILYPLYDEKRALEII 133 (218)
Q Consensus 98 it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li 133 (218)
|+.+++..||...+.++.+.+.+...-+.+++..+.
T Consensus 1 MS~~~l~~Fl~~~~~d~~l~~~l~~~~~~~e~~~lA 36 (49)
T PF07862_consen 1 MSIESLKAFLEKVKSDPELREQLKACQNPEEVVALA 36 (49)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHH
Confidence 567778888887776654433332222444444443
No 122
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=72.08 E-value=4 Score=20.69 Aligned_cols=15 Identities=27% Similarity=0.211 Sum_probs=11.3
Q ss_pred hcCCCCcccHHHHHH
Q psy16202 18 LVEAKGKVPVKVVSR 32 (218)
Q Consensus 18 d~d~~G~I~~~el~~ 32 (218)
|.|+||+|+.-++.-
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 678999999887654
No 123
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=70.40 E-value=2.6 Score=27.03 Aligned_cols=28 Identities=21% Similarity=0.181 Sum_probs=21.2
Q ss_pred CCCcccccCCCCCCCCcHHHHHHHHHcCCccC
Q psy16202 187 SSHNTYLSGRQFGGKSSVEMYRQTLLAGCRFV 218 (218)
Q Consensus 187 SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcv 218 (218)
++++|+|.. +....+-|..|...|+.||
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV 59 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVV 59 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEE
Confidence 458999987 6678889999999998875
No 124
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=65.21 E-value=11 Score=28.87 Aligned_cols=53 Identities=9% Similarity=0.333 Sum_probs=26.7
Q ss_pred CCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhh---hhccCCcCHHHHHHHHcC
Q psy16202 95 AETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEE---IRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 95 ~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~---~~~~g~ls~~~F~~~L~s 159 (218)
.+.||..||.+.=+-.- ++...+.+++++|..+.. ....+.|+++||..||-.
T Consensus 5 ~~~lsp~eF~qLq~y~e------------ys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~ 60 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSE------------YSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKT 60 (138)
T ss_dssp -S-S-HHHHHHHHHHHH------------H----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHH
T ss_pred eeccCHHHHHHHHHHHH------------HHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHH
Confidence 45677777765433221 233345666666644321 124568999999999864
No 125
>KOG2243|consensus
Probab=63.19 E-value=14 Score=38.60 Aligned_cols=64 Identities=9% Similarity=0.223 Sum_probs=49.7
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCC
Q psy16202 84 EELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDEN 162 (218)
Q Consensus 84 ~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n 162 (218)
...|+.||.|+.|.|+..+|.+.+..... +|..++.-++.-.+.+ .+..+++++|+.-...+..
T Consensus 4060 sdtfkeydpdgkgiiskkdf~kame~~k~-----------ytqse~dfllscae~d----end~~~y~dfv~rfhepak 4123 (5019)
T KOG2243|consen 4060 SDTFKEYDPDGKGIISKKDFHKAMEGHKH-----------YTQSEIDFLLSCAEAD----ENDMFDYEDFVDRFHEPAK 4123 (5019)
T ss_pred cccchhcCCCCCccccHHHHHHHHhcccc-----------chhHHHHHHHHhhccC----ccccccHHHHHHHhcCchh
Confidence 35689999999999999999999865421 6778887777777766 6678999999887655443
No 126
>KOG4578|consensus
Probab=63.13 E-value=3 Score=36.40 Aligned_cols=59 Identities=8% Similarity=0.134 Sum_probs=33.3
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHH---HhcC-CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHH
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSR---TFAS-GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELY 74 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~---~l~~-~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~ 74 (218)
.-+|-+.++|+|.++.|..+|++- ++.. .+..+=.+.+++-+ |.+++..|+++|+..-+
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yC-------DlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYC-------DLNKDKKISLDEWRGCL 396 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhc-------ccCCCceecHHHHhhhh
Confidence 445666667777777777777643 2322 12223344445544 55666667777665543
No 127
>KOG0035|consensus
Probab=62.48 E-value=18 Score=35.76 Aligned_cols=73 Identities=8% Similarity=0.022 Sum_probs=52.4
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCC
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSD 160 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~ 160 (218)
.+++.+|+.+++...+.++.++|.+.|...+....-.|. =..++..++.+.++. ..|++++.+|..+|..+
T Consensus 747 ~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~-----~~~e~~~lvn~~n~l----~~~qv~~~e~~ddl~R~ 817 (890)
T KOG0035|consen 747 DELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQ-----GIAEWFRLVNKKNPL----IQGQVQLLEFEDDLERE 817 (890)
T ss_pred HHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHH-----HHHHHHHHHhccCcc----cccceeHHHHHhHhhhh
Confidence 578999999998888899999999999998754310000 023344555555554 35889999999998866
Q ss_pred CC
Q psy16202 161 EN 162 (218)
Q Consensus 161 ~n 162 (218)
..
T Consensus 818 ~e 819 (890)
T KOG0035|consen 818 YE 819 (890)
T ss_pred hh
Confidence 53
No 128
>PLN02228 Phosphoinositide phospholipase C
Probab=61.68 E-value=36 Score=32.15 Aligned_cols=62 Identities=11% Similarity=0.321 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-----chHHHHHHHHHcCC----CCCcccHHHHHHHHHH
Q psy16202 39 TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP-----RNDIEELFQSITKG----KAETINLDQFITFLNE 109 (218)
Q Consensus 39 ~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~-----r~ei~~iF~~~d~~----~~g~it~~ef~~FL~~ 109 (218)
...+|..++.++. +.+.++.++|..|+..... ......+|..|... ..|.|+.+.|..||..
T Consensus 22 ~~~ei~~if~~~s---------~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 22 PPVSIKRLFEAYS---------RNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CcHHHHHHHHHhc---------CCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 4478888998872 1257999999999876432 24568888888642 2367999999999964
No 129
>KOG4286|consensus
Probab=60.97 E-value=20 Score=34.76 Aligned_cols=95 Identities=15% Similarity=0.202 Sum_probs=59.8
Q ss_pred hhhHHHHHHHHhhhhcCCCCcccHHHHHHHhc---CCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC--
Q psy16202 4 VLMLQLLSWMRLGMLVEAKGKVPVKVVSRTFA---SGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC-- 78 (218)
Q Consensus 4 ~~~~~~~~wl~~~fd~d~~G~I~~~el~~~l~---~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~-- 78 (218)
|+|- ..|+.+.||..++|+|.+-+++..|. +...++...-+|+.+. +....++--.|-.+...+.
T Consensus 468 vD~~--lN~llNvyD~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA--------~~~sq~~q~~l~lLL~dliqi 537 (966)
T KOG4286|consen 468 VDMC--LNWLLNVYDTGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVA--------SSTSQCDQRRLGLLLHDLIQI 537 (966)
T ss_pred HHHH--HHHHHHhcccCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHc--------CchhhHHHHHHHHHHHHHHHH
Confidence 4554 37999999999999999999986554 3445556668888873 2222333334444443321
Q ss_pred --------------CchHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 79 --------------PRNDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 79 --------------~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
-+|-++.+|+.. .+. ..|++..|.+++.-+
T Consensus 538 pr~lGE~aAfGgsNvepsvrsCF~~v-~~~-pei~~~~f~dw~~~e 581 (966)
T KOG4286|consen 538 PRQLGEVAAFGGSNIEPSVRSCFQFV-NNK-PEIEAALFLDWMRLE 581 (966)
T ss_pred HHHHhHHHhhcCCCCChHHHHHHHhc-CCC-CcchHHHHHHHhccC
Confidence 146788888832 233 467777777776543
No 130
>PF05383 La: La domain; InterPro: IPR006630 Human Ro ribonucleoproteins (RNPs) are composed of one of the four small Y RNAs and at least two proteins, Ro60 and La. The La protein is a 47 kDa polypeptide that frequently acts as an autoantigen in systemic lupus erythematosus and Sjogren's syndrome []. In the nucleus, La acts as a RNA polymerase III (RNAP III) transcription factor, while in the cytoplasm, La acts as a translation factor []. In the nucleus, La binds to the 3'UTR of nascent RNAP III transcripts to assist in folding and maturation []. In the cytoplasm, La recognises specific classes of mRNAs that contain a 5'-terminal oligopyrimidine (5'TOP) motif known to control protein synthesis []. The specific recognition is mediated by the N-terminal domain of La, which comprises a La motif and a RNA recognition motif (RRM). The La motif adopts an alpha/beta fold that comprises a winged-helix motif []. Homologous La domain-containing proteins have been identified in a wide range of organisms except Archaea, bacteria and viruses [].; PDB: 1S29_A 1YTY_B 2VOO_B 1S7A_A 2VOP_A 2VON_B 1ZH5_B 2VOD_A 2CQK_A.
Probab=59.61 E-value=12 Score=24.30 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=19.7
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHH
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSR 32 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~ 32 (218)
+..||+..++.+++|.||++.+..
T Consensus 16 ~D~fL~~~~~~~~~g~Vpi~~i~~ 39 (61)
T PF05383_consen 16 RDKFLRSQMDSNPDGWVPISTILS 39 (61)
T ss_dssp C-HHHHHHHCTTTTTBEEHHHHTT
T ss_pred cCHHHHHHHHhcCCCcEeHHHHHc
Confidence 456889888999999999999854
No 131
>KOG0042|consensus
Probab=55.72 E-value=17 Score=34.31 Aligned_cols=65 Identities=14% Similarity=0.211 Sum_probs=51.8
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCCC
Q psy16202 85 ELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDENA 163 (218)
Q Consensus 85 ~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n~ 163 (218)
.-|..+|.++.++.++++..+.|+.+... ++.+.+.++.++.+.. .+|...+.+|..++....+.
T Consensus 597 ~rf~~lD~~k~~~~~i~~v~~vlk~~~~~----------~d~~~~~~~l~ea~~~----~~g~v~l~e~~q~~s~~~~g 661 (680)
T KOG0042|consen 597 TRFAFLDADKKAYQAIADVLKVLKSENVG----------WDEDRLHEELQEADEN----LNGFVELREFLQLMSAIKNG 661 (680)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHhcCC----------CCHHHHHHHHHHHHHh----hcceeeHHHHHHHHHHHhcC
Confidence 44788899888999999999999998732 4777788888877654 47899999999988766554
No 132
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=55.43 E-value=53 Score=25.05 Aligned_cols=67 Identities=10% Similarity=0.269 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHHH--cCCchHHHHHHHHHcCCC-------CCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHH
Q psy16202 63 ADFTFDKFYELYHK--ICPRNDIEELFQSITKGK-------AETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEII 133 (218)
Q Consensus 63 g~l~f~eF~~~~~~--l~~r~ei~~iF~~~d~~~-------~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li 133 (218)
+.|+=.||.++-.. -.+ ..|..+...|..++ .+.|+.+.|+.||+..=... +.++-|+.|+
T Consensus 6 ~~lsp~eF~qLq~y~eys~-kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d---------~P~~lc~hLF 75 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYST-KKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVD---------LPEDLCQHLF 75 (138)
T ss_dssp S-S-HHHHHHHHHHHHH-----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S-----------HHHHHHHH
T ss_pred eccCHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCC---------CCHHHHHHHH
Confidence 46777788776432 223 34666666654332 35799999999999985432 3667788898
Q ss_pred HHhcch
Q psy16202 134 NTYEQN 139 (218)
Q Consensus 134 ~~~~~~ 139 (218)
.-|...
T Consensus 76 ~sF~~~ 81 (138)
T PF14513_consen 76 LSFQKK 81 (138)
T ss_dssp HHS---
T ss_pred HHHhCc
Confidence 877654
No 133
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=55.13 E-value=62 Score=22.60 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=40.4
Q ss_pred CCCcccHHHHHHHh---cC--CCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCch---H-HHHHHHHHc
Q psy16202 21 AKGKVPVKVVSRTF---AS--GKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRN---D-IEELFQSIT 91 (218)
Q Consensus 21 ~~G~I~~~el~~~l---~~--~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~---e-i~~iF~~~d 91 (218)
.||.++..|...+- .. +.++.+..+++..+ ........++.+|.+.+...++.+ . +..+|....
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~ 84 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEA-------EALEEEAPDLYEFTSLIKEHFDYEERLELVEALWEVAY 84 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-------HHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 47999999986533 22 33444444444443 112234578889988877654322 2 344455555
Q ss_pred CCCCCcccHHH
Q psy16202 92 KGKAETINLDQ 102 (218)
Q Consensus 92 ~~~~g~it~~e 102 (218)
.| |.++..|
T Consensus 85 AD--G~~~~~E 93 (104)
T cd07313 85 AD--GELDEYE 93 (104)
T ss_pred hc--CCCCHHH
Confidence 55 4565554
No 134
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=53.87 E-value=41 Score=26.74 Aligned_cols=94 Identities=18% Similarity=0.340 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCCCCC--cccHHHHHHHHHHh--cCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 82 DIEELFQSITKGKAE--TINLDQFITFLNEK--QRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 82 ei~~iF~~~d~~~~g--~it~~ef~~FL~~~--Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
++..+|.++-.. .| .++.+.|..-+.+. |.+. +-+.+.++|+..-.- +....+|+.+|..||
T Consensus 20 ~vi~~W~eiv~~-~~i~av~~~~Fi~~aa~~f~q~~q----------~~~Na~~~I~~il~~---k~~~~iT~~Df~~F~ 85 (181)
T PF11422_consen 20 NVISIWEEIVQN-HGIFAVSLDFFIKKAANRFKQPSQ----------SLKNAIQVIQYILTP---KNTNVITIPDFYKFL 85 (181)
T ss_dssp HHHHHHHHHHSS-SS--EEEHHHHHHHHHHHHS-TTS-----------HHHHHHHHHHHS-----SS-SEEEHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCcceeeHHHHHHHHHHHhccccc----------cccchHHHHHHHHcC---CCCceeeHHHHHHHH
Confidence 345556666553 24 57766666655443 3221 334455555443221 124567777777775
Q ss_pred c--CCCCCC-----------------c--cccccccccccCCccccccccCCCccc
Q psy16202 158 M--SDENAP-----------------V--FLDRLDFYMDMDQPLAHYYINSSHNTY 192 (218)
Q Consensus 158 ~--s~~n~~-----------------~--~~~~~~~~~dm~~Pls~YfI~SSHNTY 192 (218)
. ++++.+ + +|+ ..+.++.|++-||=+.=||=.
T Consensus 86 A~FGP~~tim~KI~~lL~~s~~~~~wl~~~Pd---~~~~~~~~i~g~f~~t~~NC~ 138 (181)
T PF11422_consen 86 ARFGPEETIMEKIHSLLCSSNNDGQWLYFDPD---AEKNFDNSISGYFDNTEPNCF 138 (181)
T ss_dssp HHSSSGGGHHHHHHHHHHHHHTTTS-B-SSSS---TTTTTCCS-EEEEESSSTTEE
T ss_pred HHhCCchhHHHHHHHHHHhhccCCcceeeCch---hhcccCcccceeeccCCCceE
Confidence 4 333321 1 221 346788899999998888844
No 135
>KOG3866|consensus
Probab=48.55 E-value=43 Score=29.23 Aligned_cols=82 Identities=12% Similarity=0.147 Sum_probs=50.0
Q ss_pred hcCCCCcccHHHHHHHhcC--------CCcHHH-----------HHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC
Q psy16202 18 LVEAKGKVPVKVVSRTFAS--------GKTEKL-----------VYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC 78 (218)
Q Consensus 18 d~d~~G~I~~~el~~~l~~--------~~~~~~-----------i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~ 78 (218)
|.|+||.++-.|+..+|.. .+.+.. -...++.+ |++.+..++.+||+.--..-.
T Consensus 254 D~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~v-------DtNqDRlvtleEFL~~t~~ke 326 (442)
T KOG3866|consen 254 DLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQV-------DTNQDRLVTLEEFLNDTDNKE 326 (442)
T ss_pred ccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhc-------ccchhhhhhHHHHHhhhhhcc
Confidence 7899999999999887753 111111 12234555 788888899999987543311
Q ss_pred -CchHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 79 -PRNDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 79 -~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
..+ .+-|..+... ...|.+||++|=+..
T Consensus 327 f~~p--~e~WEtl~q~--~~yTeEEL~~fE~e~ 355 (442)
T KOG3866|consen 327 FNPP--KEEWETLGQK--KVYTEEELQQFEREY 355 (442)
T ss_pred cCCc--chhhhhhccc--ccccHHHHHHHHHHH
Confidence 111 1233333322 478888888886554
No 136
>PLN02222 phosphoinositide phospholipase C 2
Probab=47.38 E-value=68 Score=30.46 Aligned_cols=61 Identities=15% Similarity=0.263 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC-----CchHHHHHHHHHcC-CCCCcccHHHHHHHHHH
Q psy16202 40 EKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC-----PRNDIEELFQSITK-GKAETINLDQFITFLNE 109 (218)
Q Consensus 40 ~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~-----~r~ei~~iF~~~d~-~~~g~it~~ef~~FL~~ 109 (218)
..+|..++.++. . .+.++.++|..|+.... +.++...||..|.. ...+.|+.+.|.+||..
T Consensus 24 ~~ei~~if~~~~--------~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 24 PREIKTIFEKYS--------E-NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred cHHHHHHHHHhc--------C-CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 358888888862 1 36899999999987643 23456778887642 22457999999999965
No 137
>PLN02230 phosphoinositide phospholipase C 4
Probab=47.20 E-value=80 Score=30.11 Aligned_cols=62 Identities=13% Similarity=0.165 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC------CchHHHHHHHHHcC-------CCCCcccHHHHHHH
Q psy16202 40 EKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC------PRNDIEELFQSITK-------GKAETINLDQFITF 106 (218)
Q Consensus 40 ~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~------~r~ei~~iF~~~d~-------~~~g~it~~ef~~F 106 (218)
..+|+.+|.++. .+.+.++.++|..|+.... +..+...++..+-. -+.+.|+.+.|.+|
T Consensus 28 ~~ei~~lf~~~s--------~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~y 99 (598)
T PLN02230 28 VADVRDLFEKYA--------DGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYY 99 (598)
T ss_pred cHHHHHHHHHHh--------CCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHH
Confidence 368999999872 2336899999999997643 22345666655421 12346999999999
Q ss_pred HHH
Q psy16202 107 LNE 109 (218)
Q Consensus 107 L~~ 109 (218)
|..
T Consensus 100 L~s 102 (598)
T PLN02230 100 LFS 102 (598)
T ss_pred HcC
Confidence 965
No 138
>KOG2243|consensus
Probab=47.11 E-value=35 Score=35.92 Aligned_cols=52 Identities=15% Similarity=0.242 Sum_probs=38.8
Q ss_pred hhcCCCCcccHHHHHHHhcCC--CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy16202 17 MLVEAKGKVPVKVVSRTFASG--KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYH 75 (218)
Q Consensus 17 fd~d~~G~I~~~el~~~l~~~--~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~ 75 (218)
+|-||.|.|+.+++.++|... .+..++.=++.-. ..+.+..++|++|+.-++
T Consensus 4066 ydpdgkgiiskkdf~kame~~k~ytqse~dfllsca-------e~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4066 YDPDGKGIISKKDFHKAMEGHKHYTQSEIDFLLSCA-------EADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cCCCCCccccHHHHHHHHhccccchhHHHHHHHHhh-------ccCccccccHHHHHHHhc
Confidence 467899999999999999863 3555555444432 567778999999998765
No 139
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=42.74 E-value=93 Score=23.94 Aligned_cols=51 Identities=20% Similarity=0.373 Sum_probs=36.6
Q ss_pred CCCCCCHHHHHHHHHHc------CCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhc
Q psy16202 61 EPADFTFDKFYELYHKI------CPRNDIEELFQSITKGKAETINLDQFITFLNEKQ 111 (218)
Q Consensus 61 ~~g~l~f~eF~~~~~~l------~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q 111 (218)
....++=..|.+++... .+..++.-||.++...+...|+.++|..+|...-
T Consensus 15 ~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA 71 (154)
T PF05517_consen 15 NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELA 71 (154)
T ss_dssp TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHH
Confidence 34567777888887652 2457889999998665555799999999998764
No 140
>KOG0869|consensus
Probab=42.58 E-value=1.6e+02 Score=22.97 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=47.6
Q ss_pred cCCCCcccHHHHHHHhcCC-----CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHHHcCC
Q psy16202 19 VEAKGKVPVKVVSRTFASG-----KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQSITKG 93 (218)
Q Consensus 19 ~d~~G~I~~~el~~~l~~~-----~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~ 93 (218)
++.|-.+|+..|.+.|++. +..++.++.++++ -.||+.|+..- +=......
T Consensus 27 reqDr~LPIANV~RIMK~~lP~naKIsKDAKE~vQEC----------------VSEfISFvT~E--------AsekC~~E 82 (168)
T KOG0869|consen 27 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQEC----------------VSEFISFVTGE--------ASEKCQRE 82 (168)
T ss_pred chhhhhccHHHHHHHHHhcCCcccccchHHHHHHHHH----------------HHHHHHHHhhH--------HHHHHHHH
Confidence 3455678899998888763 2346788888887 36999987520 00111112
Q ss_pred CCCcccHHHHHHHHHHhcCCc
Q psy16202 94 KAETINLDQFITFLNEKQRDP 114 (218)
Q Consensus 94 ~~g~it~~ef~~FL~~~Q~e~ 114 (218)
+.-+|+.+++.-.|...+-+.
T Consensus 83 kRKTIngdDllwAm~tLGFe~ 103 (168)
T KOG0869|consen 83 KRKTINGDDLLWAMSTLGFEN 103 (168)
T ss_pred hcCcccHHHHHHHHHHcCcHh
Confidence 334889999999998887653
No 141
>cd08029 LA_like_fungal La-motif domain of fungal proteins similar to the La autoantigen. This domain is found in fungal proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=40.73 E-value=31 Score=23.42 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=27.0
Q ss_pred HHHHHHHhhhhcCCCCcccHHHHHHH--hcCCCcHHHHHHHHHH
Q psy16202 8 QLLSWMRLGMLVEAKGKVPVKVVSRT--FASGKTEKLVYQTMAE 49 (218)
Q Consensus 8 ~~~~wl~~~fd~d~~G~I~~~el~~~--l~~~~~~~~i~~~~~~ 49 (218)
.+..||+.....+.+|.|++..|..+ +++......|.++++.
T Consensus 18 ~~D~fLr~~~~~~~~G~Vpl~~i~~F~rmk~l~~~~~i~~Al~~ 61 (76)
T cd08029 18 PTDKFLWTLTGGSNNGWVPIKTIASFKRMRRFQPLEAVVEALRE 61 (76)
T ss_pred ccCHHHHHHhccCCCCcEehHHHhCchHHHHcCCHHHHHHHHHh
Confidence 34568888777799999999998653 2222223455555553
No 142
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=38.42 E-value=1.4e+02 Score=20.98 Aligned_cols=71 Identities=17% Similarity=0.290 Sum_probs=37.2
Q ss_pred HHHHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHHH
Q psy16202 11 SWMRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQSI 90 (218)
Q Consensus 11 ~wl~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~ 90 (218)
+++.... .|.+|.++.+.+..+|. ++.++-..+| ....+.+ ..+-++.+|..-
T Consensus 6 RylFsli-sd~~g~~~~~~l~~lL~------d~lqip~~vg---------E~~aFg~-----------~e~sv~sCF~~~ 58 (90)
T PF09069_consen 6 RYLFSLI-SDSNGCMDQRKLGLLLH------DVLQIPRAVG---------EGPAFGY-----------IEPSVRSCFQQV 58 (90)
T ss_dssp HHHHHHH-S-TTS-B-HHHHHHHHH------HHHHHHHHTT----------GGGGT-------------HHHHHHHHHHT
T ss_pred HHHHHHH-cCCCCCCcHHHHHHHHH------HHHHHHHHhC---------ccccccC-----------cHHHHHHHhccc
Confidence 3444332 67777777777777664 4444444442 0111111 345678888886
Q ss_pred cCCCCCcccHHHHHHHHHHh
Q psy16202 91 TKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 91 d~~~~g~it~~ef~~FL~~~ 110 (218)
. .+..|+.++|.++|..+
T Consensus 59 ~--~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 59 Q--LSPKITENQFLDWLMSE 76 (90)
T ss_dssp T--T-S-B-HHHHHHHHHT-
T ss_pred C--CCCccCHHHHHHHHHhC
Confidence 3 23589999999999876
No 143
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=38.13 E-value=2.5e+02 Score=23.76 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=57.2
Q ss_pred CCCCcccHHHHHH---HhcC-CCcH---HHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc-CCchHH-----HHH
Q psy16202 20 EAKGKVPVKVVSR---TFAS-GKTE---KLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI-CPRNDI-----EEL 86 (218)
Q Consensus 20 d~~G~I~~~el~~---~l~~-~~~~---~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l-~~r~ei-----~~i 86 (218)
-.||+++-.|+.. ++.. ..+. +.+.++|+.- ....+++++|..-++.. ..++++ ..+
T Consensus 67 kADG~Vse~Ei~~~~~l~~~~~l~~~~r~~a~~lf~~~----------k~~~~~l~~~~~~~~~~~~~r~~l~~~lL~~l 136 (267)
T PRK09430 67 KAKGRVTEADIRIASQLMDRMNLHGEARRAAQQAFREG----------KEPDFPLREKLRQFRSVCGGRFDLLRMFLEIQ 136 (267)
T ss_pred hcCCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh----------cccCCCHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 4689999999862 2221 2223 2366777653 12347899999887664 456665 344
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhc
Q psy16202 87 FQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYE 137 (218)
Q Consensus 87 F~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~ 137 (218)
|...-.| |.++..| ..+|+..-.--. ++..+...+...+.
T Consensus 137 ~~vA~AD--G~l~~~E-~~~L~~Ia~~Lg--------is~~df~~~~~~~~ 176 (267)
T PRK09430 137 IQAAFAD--GSLHPNE-RQVLYVIAEELG--------FSRFQFDQLLRMMQ 176 (267)
T ss_pred HHHHHhc--CCCCHHH-HHHHHHHHHHcC--------CCHHHHHHHHHHHH
Confidence 5555555 5788877 455555532111 46666777766654
No 144
>KOG1029|consensus
Probab=36.64 E-value=52 Score=32.34 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=44.6
Q ss_pred hhhhhHHHHHH--HHhhhhcCCCCcccHHHHHHHhcCC-CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy16202 2 WFVLMLQLLSW--MRLGMLVEAKGKVPVKVVSRTFASG-KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYH 75 (218)
Q Consensus 2 ~~~~~~~~~~w--l~~~fd~d~~G~I~~~el~~~l~~~-~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~ 75 (218)
|-|-.-.++.| +++..|+..+|.++-..-+.+|... .....+..+-.- .|.+++|.|+-+||+-.+.
T Consensus 187 WAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~Lpq~~LA~IW~L-------sDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 187 WAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSGLPQNQLAHIWTL-------SDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred ccccchhhhHHHHHhhhcccccccccccHHHHHHHHhcCCchhhHhhheee-------eccCCCCcccHHHHHHHHH
Confidence 33444444433 4455688899999999988887653 333344444332 2889999999999986554
No 145
>PHA02554 13 neck protein; Provisional
Probab=36.18 E-value=10 Score=32.57 Aligned_cols=18 Identities=33% Similarity=0.643 Sum_probs=14.7
Q ss_pred ccccCCccccccccCCCc
Q psy16202 173 YMDMDQPLAHYYINSSHN 190 (218)
Q Consensus 173 ~~dm~~Pls~YfI~SSHN 190 (218)
-+||-.||.+||.+||--
T Consensus 148 l~DllspL~dY~~n~~~~ 165 (311)
T PHA02554 148 MQDLLSPLPDYWYNSANG 165 (311)
T ss_pred HHHHhccchhhhccccch
Confidence 478888999999997643
No 146
>COG2818 Tag 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]
Probab=35.01 E-value=39 Score=27.13 Aligned_cols=119 Identities=16% Similarity=0.214 Sum_probs=66.2
Q ss_pred cCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHH
Q psy16202 77 ICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRY 156 (218)
Q Consensus 77 l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~ 156 (218)
|..|+-.+++|..|+-++--.+|.+++.+.|.+.+-. + ....++..|...-.-.+. .+..=|+.+|++-
T Consensus 51 L~KRe~freaF~~Fd~~kVA~~~~~dverLl~d~gII-R---------~r~KI~A~i~NA~~~l~l-~~e~Gsf~~flWs 119 (188)
T COG2818 51 LKKREAFREAFHGFDPEKVAAMTEEDVERLLADAGII-R---------NRGKIKATINNARAVLEL-QKEFGSFSEFLWS 119 (188)
T ss_pred HHhHHHHHHHHhcCCHHHHHcCCHHHHHHHHhCcchh-h---------hHHHHHHHHHHHHHHHHH-HHHcCCHHHHHHH
Confidence 3468889999999988776679999999999776522 1 122334444332221111 1122378888776
Q ss_pred HcCCCCCCc-------cccccccccccCCccccccccCCCcccccCCCCCCCCcHHHHHHHH------HcCCcc
Q psy16202 157 LMSDENAPV-------FLDRLDFYMDMDQPLAHYYINSSHNTYLSGRQFGGKSSVEMYRQTL------LAGCRF 217 (218)
Q Consensus 157 L~s~~n~~~-------~~~~~~~~~dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL------~~GcRc 217 (218)
......... -|....+..+|++-|-.. |--..|+-++-++.+|- ..||.|
T Consensus 120 f~~~~~~~~~~~~~~~~pa~t~~S~~mskaLKkr-----------Gf~fvGpTt~yafmqA~G~vndH~~~C~~ 182 (188)
T COG2818 120 FVGGKPSRNQVNDGSEVPASTELSDAMSKALKKR-----------GFKFVGPTTVYAFMQATGLVNDHAEGCPC 182 (188)
T ss_pred hcCCCcccccccchhhccccchhHHHHHHHHHHc-----------cCeecCcHHHHHHHHHHcchHHHHhcCCC
Confidence 665442211 011122234555555443 33355777776666653 456665
No 147
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=34.91 E-value=63 Score=17.87 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=16.2
Q ss_pred HHHHHHHHHhcchhhhhccCCcCHHHHHHHHcC
Q psy16202 127 KRALEIINTYEQNEEIRNEKSFSKDGLIRYLMS 159 (218)
Q Consensus 127 ~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s 159 (218)
.+..+||.++- .-.+|.++|..||.+
T Consensus 3 ~EW~~Li~eA~-------~~Gls~eeir~FL~~ 28 (30)
T PF08671_consen 3 EEWVELIKEAK-------ESGLSKEEIREFLEF 28 (30)
T ss_dssp HHHHHHHHHHH-------HTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HcCCCHHHHHHHHHh
Confidence 35667776553 245999999999853
No 148
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=34.05 E-value=1.6e+02 Score=20.48 Aligned_cols=67 Identities=10% Similarity=0.170 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHc---CCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhc
Q psy16202 64 DFTFDKFYELYHKI---CPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYE 137 (218)
Q Consensus 64 ~l~f~eF~~~~~~l---~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~ 137 (218)
.+|.+|+.++.+.. .++++.+.|..-+.+..-...+.++-.+.+++..... .+-+..++.+|+.+|-
T Consensus 14 ~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkeia~iT-------~p~ta~~vn~Lf~qf~ 83 (85)
T PF11116_consen 14 NITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEIAKIT-------SPQTAKQVNELFEQFT 83 (85)
T ss_pred cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc-------CHHHHHHHHHHHHHHh
Confidence 57888988876653 3677888888887766656788888888888876543 1124455666766653
No 149
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=33.35 E-value=1.2e+02 Score=20.28 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCc
Q psy16202 62 PADFTFDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDP 114 (218)
Q Consensus 62 ~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~ 114 (218)
+..+.|.--...+....+......+...|+.=+.+.|+.++|.+.|+..=||.
T Consensus 6 sp~~~F~~L~~~l~~~l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVGD~ 58 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHLPPSKMDLLQKHYEEFKKKKISREEFVRKLRQIVGDQ 58 (70)
T ss_pred CCcccHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 34566666555555555555555554444333346899999999999986653
No 150
>PF08485 Polysacc_syn_2C: Polysaccharide biosynthesis protein C-terminal; InterPro: IPR013692 This domain is found to the C terminus of the IPR003869 from INTERPRO domain in bacterial polysaccharide biosynthesis enzymes including the capsule protein CapD [] and several putative epimerases/dehydratases. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0009103 lipopolysaccharide biosynthetic process
Probab=33.26 E-value=40 Score=20.85 Aligned_cols=18 Identities=44% Similarity=0.460 Sum_probs=11.4
Q ss_pred CCCcccccCCCCCCCCcHHHHHHHHH
Q psy16202 187 SSHNTYLSGRQFGGKSSVEMYRQTLL 212 (218)
Q Consensus 187 SSHNTYL~g~Ql~~~ss~e~y~~aL~ 212 (218)
.||||..+ +||.-+.-|+
T Consensus 25 nShNT~rL--------~ve~~k~lLl 42 (48)
T PF08485_consen 25 NSHNTERL--------DVEEMKELLL 42 (48)
T ss_pred CCCCcccc--------CHHHHHHHHH
Confidence 59999865 4555444443
No 151
>PF03255 ACCA: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; InterPro: IPR001095 This entry contains the alpha subunit the acetyl coenzyme A carboxylase complex (6.4.1.2 from EC). It catalyses the first step in the synthesis of long-chain fatty acids which involves the carboxylation of acetyl-CoA to malonyl-CoA. The acetyl-CoA carboxylase complex is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and two non-identical carboxyl transferase subunits (alpha and beta) in a 2:2 association []. The reaction involves two steps: Biotin carrier protein + ATP + HCO3 - -> Carboxybiotin carrier protein + ADP + Pi Carboxybiotin carrier protein + Acetyl-CoA -> Malonyl-CoA + Biotin carrier protein ; GO: 0003989 acetyl-CoA carboxylase activity, 0006633 fatty acid biosynthetic process, 0009317 acetyl-CoA carboxylase complex; PDB: 2F9I_A 2F9Y_A.
Probab=33.08 E-value=25 Score=27.03 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=9.1
Q ss_pred CCCcHHHHHHHHH
Q psy16202 200 GKSSVEMYRQTLL 212 (218)
Q Consensus 200 ~~ss~e~y~~aL~ 212 (218)
|..++|+|++||+
T Consensus 127 Gm~~PeGYRKAlR 139 (145)
T PF03255_consen 127 GMPHPEGYRKALR 139 (145)
T ss_dssp G---HHHHHHHHH
T ss_pred CCCCcchHHHHHH
Confidence 7789999999985
No 152
>KOG0042|consensus
Probab=32.80 E-value=69 Score=30.36 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=39.4
Q ss_pred hhhcCCCCcccHHHHHHHhcCCC---cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHc
Q psy16202 16 GMLVEAKGKVPVKVVSRTFASGK---TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKI 77 (218)
Q Consensus 16 ~fd~d~~G~I~~~el~~~l~~~~---~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l 77 (218)
.+|.|+.|.+++.++.++|...+ +++.+.+.++++ |..-+|.....+|.+++..+
T Consensus 601 ~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea-------~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 601 FLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEA-------DENLNGFVELREFLQLMSAI 658 (680)
T ss_pred hhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-------HHhhcceeeHHHHHHHHHHH
Confidence 35888889999999988887632 456666777776 44446777778888877654
No 153
>KOG1265|consensus
Probab=32.75 E-value=2e+02 Score=28.93 Aligned_cols=83 Identities=10% Similarity=0.137 Sum_probs=55.4
Q ss_pred CCCCcccHHHH-----HHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-------------ch
Q psy16202 20 EAKGKVPVKVV-----SRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICP-------------RN 81 (218)
Q Consensus 20 d~~G~I~~~el-----~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~-------------r~ 81 (218)
++...|++.++ ..++.......+|.++|.+++ .+....+|-+++..|++.-.+ ..
T Consensus 195 ~k~dsI~~d~f~~e~f~~~l~klcpR~eie~iF~ki~-------~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~ 267 (1189)
T KOG1265|consen 195 GKNDSIEPDDFTLEKFYRLLNKLCPRPEIEEIFRKIS-------GKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPR 267 (1189)
T ss_pred CCcCccChhhccHHHHHHHHHhcCCchhHHHHHHHhc-------cCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHH
Confidence 33344555443 455665554468899999883 344468999999999875332 23
Q ss_pred HHHHHHHHHcCC----CCCcccHHHHHHHHHH
Q psy16202 82 DIEELFQSITKG----KAETINLDQFITFLNE 109 (218)
Q Consensus 82 ei~~iF~~~d~~----~~g~it~~ef~~FL~~ 109 (218)
.+..+..+|-.+ ..|.|+.+-|.+||-.
T Consensus 268 r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 268 RIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred HHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 466667777543 2478999999999854
No 154
>PF08784 RPA_C: Replication protein A C terminal; InterPro: IPR014892 This protein corresponds to the C-terminal of the single stranded DNA binding protein RPA (replication protein A). RPA is involved in many DNA metabolic pathways including DNA replication, DNA repair, recombination, cell cycle and DNA damage checkpoints. ; PDB: 1QUQ_C 2PQA_C 3KDF_B 2Z6K_B 2PI2_B 1L1O_E 1DPU_A 1Z1D_A.
Probab=31.32 E-value=1.2e+02 Score=21.23 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=24.2
Q ss_pred HHHHHHHHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHh
Q psy16202 7 LQLLSWMRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAEL 50 (218)
Q Consensus 7 ~~~~~wl~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~ 50 (218)
.+++..|+. -....+| |++.+|.+-| ..++.+|+++++.+
T Consensus 50 ~~Vl~~i~~-~~~~~~G-v~v~~I~~~l--~~~~~~v~~al~~L 89 (102)
T PF08784_consen 50 DKVLNFIKQ-QPNSEEG-VHVDEIAQQL--GMSENEVRKALDFL 89 (102)
T ss_dssp HHHHHHHHC-----TTT-EEHHHHHHHS--TS-HHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCCCCc-ccHHHHHHHh--CcCHHHHHHHHHHH
Confidence 344555555 2234455 9999999888 55667777777765
No 155
>KOG4301|consensus
Probab=30.38 E-value=1.4e+02 Score=26.45 Aligned_cols=95 Identities=18% Similarity=0.128 Sum_probs=55.9
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC---chHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccc-cccccccCCHHHHHHHH
Q psy16202 58 DVIEPADFTFDKFYELYHKICP---RNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRL-NEILYPLYDEKRALEII 133 (218)
Q Consensus 58 d~~~~g~l~f~eF~~~~~~l~~---r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~-~~~~~~~~t~~~~~~li 133 (218)
|..+.|.++--.-.-.+..+|. ...++.||......+ |.|..-.+.+||++.-+-|.. -|-=.+.+|+.-++.-+
T Consensus 120 ds~~~g~~~vfavkialatlc~gk~~dklryIfs~isds~-gim~~i~~~~fl~evlslpT~v~e~psfg~te~~a~~cf 198 (434)
T KOG4301|consen 120 DSEGQGKQQVFAVKIALATLCGGKIKDKLRYIFSLISDSR-GIMQEIQRDQFLHEVLSLPTAVFEGPSFGYTELSARLCF 198 (434)
T ss_pred CccCCCCceeecchhhhhhhccchHHHHHHHHHHHHccch-HHHHHHHHHHHHHHHHcCCchhhcCCCcchHHHHHHHHH
Confidence 5666676653333334455665 467889999987554 799999999999987554411 01111123333333322
Q ss_pred HHhcchhhhhccCCcCHHHHHHHHcCCCC
Q psy16202 134 NTYEQNEEIRNEKSFSKDGLIRYLMSDEN 162 (218)
Q Consensus 134 ~~~~~~~~~~~~g~ls~~~F~~~L~s~~n 162 (218)
- ....+++.+|+.-|+++-.
T Consensus 199 ~---------qqrKv~Ln~fldtl~sdp~ 218 (434)
T KOG4301|consen 199 L---------QQRKVELNQFLDTLMSDPP 218 (434)
T ss_pred H---------HHHHHHHHHHHHHHhcCCC
Confidence 1 2345777777777777654
No 156
>KOG3555|consensus
Probab=29.88 E-value=1.7e+02 Score=26.11 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=64.8
Q ss_pred HHHHHhhhhcCCCCcccHHHHHHH---hcC--CC-cHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHH
Q psy16202 10 LSWMRLGMLVEAKGKVPVKVVSRT---FAS--GK-TEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDI 83 (218)
Q Consensus 10 ~~wl~~~fd~d~~G~I~~~el~~~---l~~--~~-~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei 83 (218)
.-|+... ..|.++......+.+. |-. .+ -+..+-=||..+ |.+.++.|+-.|...++.. ..+.=|
T Consensus 214 ~dWF~~l-he~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnkl-------D~N~Dl~Ld~sEl~~I~ld-knE~Ci 284 (434)
T KOG3555|consen 214 RDWFKAL-HEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKL-------DTNYDLLLDQSELRAIELD-KNEACI 284 (434)
T ss_pred HHHHHHH-HhhhhccCcchhhcccccccccccCcchhhhhhhhhhcc-------ccccccccCHHHhhhhhcc-CchhHH
Confidence 3477763 3455555555554433 111 11 134566677776 8899999999988776643 234568
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHhcCCccc
Q psy16202 84 EELFQSITKGKAETINLDQFITFLNEKQRDPRL 116 (218)
Q Consensus 84 ~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~ 116 (218)
+..|+.-|..++|.|+..|-..-+...+ .|..
T Consensus 285 kpFfnsCD~~kDg~iS~~EWC~CF~k~~-~pc~ 316 (434)
T KOG3555|consen 285 KPFFNSCDTYKDGSISTNEWCYCFQKSD-PPCQ 316 (434)
T ss_pred HHHHhhhcccccCccccchhhhhhccCC-Cccc
Confidence 9999999999999999999888776665 4443
No 157
>PF07165 DUF1397: Protein of unknown function (DUF1397); InterPro: IPR009832 This entry consists of several insect specific 27 kDa Haemolymph glycoprotein precursors. The function of this family is unknown [].
Probab=29.49 E-value=89 Score=25.55 Aligned_cols=48 Identities=13% Similarity=0.246 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhc
Q psy16202 62 PADFTFDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQ 111 (218)
Q Consensus 62 ~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q 111 (218)
.+.+++.++..=+..+.+..++..+|.+|...-. =...=+..|+....
T Consensus 45 ~~~vd~~~l~~eie~~~p~g~ld~vF~KyC~k~~--~~~~C~~~f~~~v~ 92 (213)
T PF07165_consen 45 SGLVDLTQLQQEIEEAKPTGDLDEVFNKYCPKRP--QAKECFDPFTEKVK 92 (213)
T ss_pred HhccCHHHHHHHHHHcCccccHHHHHHHHhHhhH--HHHHHHHHHHhhcc
Confidence 4678999999888888877889999999987542 14455555665554
No 158
>KOG1955|consensus
Probab=29.40 E-value=1.1e+02 Score=28.53 Aligned_cols=61 Identities=7% Similarity=0.084 Sum_probs=44.5
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHH
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYL 157 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L 157 (218)
+....-|+.+-.|-.|+|+-..-+.|+.+-- +..+++..|.+-.+.+ .+|.||+++|+.-+
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKSk------------lpi~ELshIWeLsD~d----~DGALtL~EFcAAf 291 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKSK------------LPIEELSHIWELSDVD----RDGALTLSEFCAAF 291 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhcc------------CchHHHHHHHhhcccC----ccccccHHHHHhhH
Confidence 3344557777778889999999999997652 3455666666655555 78999999998754
No 159
>KOG2725|consensus
Probab=28.63 E-value=71 Score=28.29 Aligned_cols=37 Identities=16% Similarity=0.343 Sum_probs=27.7
Q ss_pred cccCCHHHHHHHHHHhcchhhhh-ccCCcCHHHHHHHHc
Q psy16202 121 YPLYDEKRALEIINTYEQNEEIR-NEKSFSKDGLIRYLM 158 (218)
Q Consensus 121 ~~~~t~~~~~~li~~~~~~~~~~-~~g~ls~~~F~~~L~ 158 (218)
-|+.++++.++=+++|...++.+ .+..++++|| +|++
T Consensus 109 ~Pp~~qeeW~~EFekYkqsPEfK~lN~~Mtl~EF-KfIf 146 (411)
T KOG2725|consen 109 KPPTSQEEWEEEFEKYKQSPEFKLLNSHMTLDEF-KFIF 146 (411)
T ss_pred CCCCchHHHHHHHHHHhcCcchhhhccCCcHHHH-HHHH
Confidence 36677899988899998887743 3467999999 4443
No 160
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=28.42 E-value=3.4 Score=29.75 Aligned_cols=30 Identities=33% Similarity=0.548 Sum_probs=26.3
Q ss_pred hhhhhHHHHHHHHhhhhcCCCCcccHHHHH
Q psy16202 2 WFVLMLQLLSWMRLGMLVEAKGKVPVKVVS 31 (218)
Q Consensus 2 ~~~~~~~~~~wl~~~fd~d~~G~I~~~el~ 31 (218)
|||+...-+.|.+..=|++..|-|++..|+
T Consensus 23 WFVLt~~~L~wykd~eeKE~kyilpLdnLk 52 (110)
T cd01256 23 WFVLTSESLSWYKDDEEKEKKYMLPLDGLK 52 (110)
T ss_pred EEEEecceeeeecccccccccceeeccccE
Confidence 999999999999987778889999988875
No 161
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=28.37 E-value=2.6e+02 Score=22.19 Aligned_cols=77 Identities=9% Similarity=0.081 Sum_probs=38.5
Q ss_pred CCCcccHHHHHHH-hcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCc---hHHHHHHHHHcCCCCC
Q psy16202 21 AKGKVPVKVVSRT-FASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPR---NDIEELFQSITKGKAE 96 (218)
Q Consensus 21 ~~G~I~~~el~~~-l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r---~ei~~iF~~~d~~~~g 96 (218)
=||+|+..+.... ++.... ....++.+.. ..|.+++.+..+..-.+... +++.+.+.. .-.-
T Consensus 6 FDgTit~~d~~~~~~~~~~~-~~~~~~~~~~----------~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~~l 71 (214)
T TIGR03333 6 FDGTITNNDNIISIMKQFAP-PEWEALKDGV----------LSKTLSIQEGVGRMFGLLPSSLKEEITSFVLE---TAEI 71 (214)
T ss_pred cCCCCCcchhHHHHHHHhCc-HHHHHHHHHH----------HcCCccHHHHHHHHHhhCCCchHHHHHHHHHh---cCcc
Confidence 3588998887543 322211 2333333332 24678888888755444332 234333332 1111
Q ss_pred cccHHHHHHHHHHhc
Q psy16202 97 TINLDQFITFLNEKQ 111 (218)
Q Consensus 97 ~it~~ef~~FL~~~Q 111 (218)
.=...++.++|++.+
T Consensus 72 ~pg~~e~l~~l~~~g 86 (214)
T TIGR03333 72 REGFREFVAFINEHG 86 (214)
T ss_pred cccHHHHHHHHHHCC
Confidence 233567777776654
No 162
>smart00715 LA Domain in the RNA-binding Lupus La protein; unknown function.
Probab=27.97 E-value=35 Score=23.43 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=26.1
Q ss_pred HHHHHHHhhhhcCCCCcccHHHHHHH--hcC-CCcHHHHHHHHHH
Q psy16202 8 QLLSWMRLGMLVEAKGKVPVKVVSRT--FAS-GKTEKLVYQTMAE 49 (218)
Q Consensus 8 ~~~~wl~~~fd~d~~G~I~~~el~~~--l~~-~~~~~~i~~~~~~ 49 (218)
.+..||+...+.+ +|.|++..|.++ +++ ..+.+.|.++++.
T Consensus 21 ~~D~fLr~~~~~~-~g~Vpl~~i~~F~r~k~l~~d~~~i~~Al~~ 64 (80)
T smart00715 21 PRDKFLRKKMDKN-DGYVPISTIASFKRVKSLTTDVNLIVEALRS 64 (80)
T ss_pred hhCHHHHHHhccC-CCCEEhHHHhCchhHHHHcCCHHHHHHHHHh
Confidence 4456888888887 999999998653 222 1233455555543
No 163
>PF09447 Cnl2_NKP2: Cnl2/NKP2 family protein; InterPro: IPR018565 This entry includes the Cnl2 kinetochore protein [].
Probab=27.71 E-value=64 Score=21.41 Aligned_cols=31 Identities=16% Similarity=0.528 Sum_probs=23.2
Q ss_pred CCCCCHHHHHHHHHH-cCCchHHHHHHHHHcC
Q psy16202 62 PADFTFDKFYELYHK-ICPRNDIEELFQSITK 92 (218)
Q Consensus 62 ~g~l~f~eF~~~~~~-l~~r~ei~~iF~~~d~ 92 (218)
..-+++++|.+++-+ +...|.|+.+|+.+-.
T Consensus 17 ~~iisl~qF~~LFPr~~~~~P~ir~LYr~Lq~ 48 (67)
T PF09447_consen 17 PDIISLEQFRKLFPRRLRSHPQIRSLYRDLQA 48 (67)
T ss_pred ccccCHHHHHHHccccCCCChHHHHHHHHHHH
Confidence 356899999998854 4556788888887643
No 164
>PRK06438 hypothetical protein; Provisional
Probab=27.65 E-value=32 Score=29.62 Aligned_cols=93 Identities=10% Similarity=0.197 Sum_probs=58.2
Q ss_pred HHHhhhhcCCCCcccHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcCCchHHHHHHHHHc
Q psy16202 12 WMRLGMLVEAKGKVPVKVVSRTFASGKTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKICPRNDIEELFQSIT 91 (218)
Q Consensus 12 wl~~~fd~d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d 91 (218)
|++..+..=..|+|+.+++.+.+... .+++.+..++.|+ |..-+|.+.|+..+.........-+..-+++-|+
T Consensus 15 ~l~k~l~~~~~G~i~~e~l~~~~~~~--~~~~~~~q~~aGl-----d~~tdG~lrWdDi~~~~~~~~~gve~ggL~Ry~d 87 (292)
T PRK06438 15 ELRLEYNRWERGLIPDSEINEKINEE--KYIFYDKVKDIGI-----DEYTDPLFNWYDIFRPISLSVNGVSLGPLTRYLE 87 (292)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHH--HHHHHHHHHhcCC-----ceEecCccchHHhhhhHHHHhcCccccceeEEec
Confidence 77766543337999999999887632 2456667777776 6667899999998876654433334455555554
Q ss_pred CCC-------CCcccHHHHHHHHHHhc
Q psy16202 92 KGK-------AETINLDQFITFLNEKQ 111 (218)
Q Consensus 92 ~~~-------~g~it~~ef~~FL~~~Q 111 (218)
.+. .|.++...+...+...+
T Consensus 88 NN~fYR~Pvv~g~l~~~~~~~~~~~~~ 114 (292)
T PRK06438 88 TNTFYRIPEISGVKDFNRELDKFQKID 114 (292)
T ss_pred cCceeecceecCCCCcchhhHHHHHHH
Confidence 331 34555555544444443
No 165
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=27.41 E-value=72 Score=22.93 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=17.8
Q ss_pred hhhhc-CCCCcccHHHHHHHhcCCCcHHHHHHHHHHh
Q psy16202 15 LGMLV-EAKGKVPVKVVSRTFASGKTEKLVYQTMAEL 50 (218)
Q Consensus 15 ~~fd~-d~~G~I~~~el~~~l~~~~~~~~i~~~~~~~ 50 (218)
..||. -.||.++...+..++....+++...++|..+
T Consensus 34 ~RFd~La~dG~L~rs~Fg~CIGM~dSkeFA~eLFdAL 70 (100)
T PF08414_consen 34 KRFDKLAKDGLLPRSDFGECIGMKDSKEFAGELFDAL 70 (100)
T ss_dssp HHHHHH-BTTBEEGGGHHHHHT--S-HHHHHHHHHHH
T ss_pred HHHHHhCcCCcccHHHHHHhcCCcccHHHHHHHHHHH
Confidence 34542 3367777777777766544444444444443
No 166
>PF06181 DUF989: Protein of unknown function (DUF989); InterPro: IPR010389 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=26.52 E-value=19 Score=30.96 Aligned_cols=11 Identities=45% Similarity=0.806 Sum_probs=9.4
Q ss_pred cccCCCccccc
Q psy16202 184 YINSSHNTYLS 194 (218)
Q Consensus 184 fI~SSHNTYL~ 194 (218)
...|-||||||
T Consensus 222 klrS~hN~ylT 232 (300)
T PF06181_consen 222 KLRSRHNNYLT 232 (300)
T ss_pred HHHhhhcceeH
Confidence 46799999986
No 167
>PF00522 VPR: VPR/VPX protein; InterPro: IPR000012 Human immunodeficiency virus (HIV) is the human retrovirus associated with AIDS (acquired immune deficiency syndrome), and SIV its simian counterpart. Three main groups of primate lentivirus are known, designated Human immunodeficiency virus 1 (HIV-1), Human immunodeficiency virus 2 (HIV-2)/Simian immunodeficiency virus - mac (SIVMAC)/Simian immunodeficiency virus - sm (SIVSM) and Simian immunodeficiency virus - agm (SIVAGM). Simian immunodeficiency virus - mnd (SIVMND) has been suggested to represent a fourth distinct group []. These groups are believed to have diverged from a common ancestor long before the spread of AIDS in humans. Genetic variation in HIV-1 and HIV-2 has been studied extensively, and the nucleotide sequences reported for several strains []. ORF analysis has revealed two open reading frames, yielding the so-called R- and X-ORF proteins, which show a high degree of sequence similarity. Vpx plays a role in nuclear translocation of the viral pre-integration complex (PIC) and is thus required for the virus to infect non-dividing cells. Vpr also plays a role in nuclear translocation of the (PIC) and may target specific host proteins for degradation by the 26S proteasome. It acts by associating with the cellular CUL4A-DDB1 E3 ligase complex through direct interaction with host VPRPB/DCAF-1. This would result in cell cycle arrest or apoptosis in infected cells, creating a favourable environment for maximizing viral expression and production by rendering the HIV-1 LTR transcription more active.; GO: 0019058 viral infectious cycle, 0042025 host cell nucleus; PDB: 1VPC_A 1X9V_B 1ESX_A 1CEU_A 1M8L_A 1DSJ_A 1BDE_A 1DSK_A 1FI0_A.
Probab=26.43 E-value=21 Score=25.52 Aligned_cols=23 Identities=30% Similarity=0.629 Sum_probs=14.0
Q ss_pred CCCCCCC--CcHHHHHHHHHc--------CCcc
Q psy16202 195 GRQFGGK--SSVEMYRQTLLA--------GCRF 217 (218)
Q Consensus 195 g~Ql~~~--ss~e~y~~aL~~--------GcRc 217 (218)
||-+.|. .++++||+.|++ ||+|
T Consensus 54 gDt~~g~~~~~v~~~irilQ~aLFiHfr~GC~~ 86 (96)
T PF00522_consen 54 GDTWEGSWSYTVYAYIRILQQALFIHFRIGCQH 86 (96)
T ss_dssp SCCCHH-----HHHHHHHHHHHHHHHHHHHHC-
T ss_pred CccccchhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4555553 369999998754 8886
No 168
>PF11363 DUF3164: Protein of unknown function (DUF3164); InterPro: IPR021505 This entry is represented by Bacteriophage B3, Orf6. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=26.06 E-value=1.1e+02 Score=24.64 Aligned_cols=19 Identities=11% Similarity=0.146 Sum_probs=10.6
Q ss_pred hhcCCCCcccHHHHHHHhc
Q psy16202 17 MLVEAKGKVPVKVVSRTFA 35 (218)
Q Consensus 17 fd~d~~G~I~~~el~~~l~ 35 (218)
|.+|..|.|+.+.|..+.+
T Consensus 128 f~~dk~G~l~~~rIl~Lrr 146 (195)
T PF11363_consen 128 FQVDKEGNLNTSRILGLRR 146 (195)
T ss_pred HhcCCCCCcCHHHHHHHHh
Confidence 4555556666665555444
No 169
>cd08028 LARP_3 La RNA-binding domain of La-related protein 3. This domain is found at the N-terminus of the La autoantigen and similar proteins, and co-occurs with an RNA-recognition motif (RRM). Together these domains function to bind primary transcripts of RNA polymerase III at their 3' terminus and protect them from exonucleolytic degradation. Binding is specific for the 3'-terminal UUU-OH motif. The La autoantigen is also called Lupus La protein, LARP3, or Sjoegren syndrome type B antigen (SS-B).
Probab=25.76 E-value=75 Score=21.91 Aligned_cols=40 Identities=13% Similarity=0.246 Sum_probs=25.7
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHHHhc--C-CCcHHHHHHHHHH
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSRTFA--S-GKTEKLVYQTMAE 49 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~~l~--~-~~~~~~i~~~~~~ 49 (218)
+..||+...+.+ +|.|+++.|..+=+ + ..+.+.|.++++.
T Consensus 23 ~D~fLr~~m~~~-~G~Vpl~~i~~F~rmk~l~~d~~~i~~Al~~ 65 (82)
T cd08028 23 RDKFLKEQIKED-DGWVPMEVMLKFNRLKSLSSDPEVIAKALKK 65 (82)
T ss_pred cCHHHHHHHhcc-CCCEEhHHHhCChhHHHhcCCHHHHHHHHHh
Confidence 445777776655 99999999975322 2 2334566666665
No 170
>cd08033 LARP_6 La RNA-binding domain of La-related protein 6. This domain is found in animal and plant proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=25.65 E-value=76 Score=21.59 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=27.3
Q ss_pred HHHHHHHhhhhcCCCCcccHHHHHHH--hcC-CCcHHHHHHHHHH
Q psy16202 8 QLLSWMRLGMLVEAKGKVPVKVVSRT--FAS-GKTEKLVYQTMAE 49 (218)
Q Consensus 8 ~~~~wl~~~fd~d~~G~I~~~el~~~--l~~-~~~~~~i~~~~~~ 49 (218)
.+..||+.....|.+|.|+++-+..+ +++ ..+.+.|.++++.
T Consensus 18 ~~D~fL~~~~~~~~dG~Vpl~~i~~F~rmk~l~~d~~~I~~Al~~ 62 (77)
T cd08033 18 LKDAFLLKHVRRNKEGYVPIKLIASFKKVKALTRDWRVVAAALRR 62 (77)
T ss_pred ccCHHHHHHhccCCCCcEehHHHhcchHHHHHcCCHHHHHHHHHh
Confidence 34568888777789999999998653 222 1233555555554
No 171
>KOG1707|consensus
Probab=25.21 E-value=1.7e+02 Score=27.94 Aligned_cols=67 Identities=7% Similarity=0.142 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHH
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRY 156 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~ 156 (218)
-+.+||.--|.|.+|.++-.|+-.|=+..=+-|- .+.-.+++...+++.-|+ .--+..+++.||+-+
T Consensus 196 al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl------~p~~l~~vk~vv~e~~p~--gv~~~~ltl~GFLfL 262 (625)
T KOG1707|consen 196 ALKRIFKISDSDNDGALSDAELNDFQKKCFNTPL------DPQELEDVKNVVQEICPD--GVYERGLTLPGFLFL 262 (625)
T ss_pred HHHHHHhhhccccccccchhhhhHHHHHhcCCCC------CHHHHHHHHHHHHhhcCc--hhhhccccccchHHH
Confidence 4678888889999999999999999777643331 011234556666666653 223567999998654
No 172
>PRK03980 flap endonuclease-1; Provisional
Probab=25.16 E-value=3.9e+02 Score=22.93 Aligned_cols=60 Identities=22% Similarity=0.360 Sum_probs=37.2
Q ss_pred hHHHHHHHHHcC--C---CCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHH
Q psy16202 81 NDIEELFQSITK--G---KAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGL 153 (218)
Q Consensus 81 ~ei~~iF~~~d~--~---~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F 153 (218)
.+++++|..=.- + ..+..+.+.+.+||.++.+ ++++++...+.+...... ...+-+++.|
T Consensus 227 ~~~r~~f~~p~v~~~~~~~~~~pd~~~l~~fl~~e~~-----------f~~~rv~~~~~~l~~~~~--~~~q~~l~~f 291 (292)
T PRK03980 227 DEIREFFLNPPVTDDYELKWKEPDKEGIIEFLVEEHD-----------FSEERVKKALERLEKAVK--EKKQTTLDSW 291 (292)
T ss_pred HHHHHHhcCCCCCCCCCccCCCCCHHHHHHHHhccCC-----------CCHHHHHHHHHHHHHHhc--cCcccchhhc
Confidence 456666644211 1 2356889999999987643 688888888887765411 1225555555
No 173
>TIGR03798 ocin_TIGR03798 bacteriocin propeptide, TIGR03798 family. This model describes a conserved, fairly long (about 65 residue) propeptide region for a family of putative microcins, that is, bacteriocins of small size. Members of the seed alignment tend to have the Gly-Gly motif as the last two residues of the matched region. This is a cleavage site for a combination processing/export ABC transporter with a peptidase domain.
Probab=25.05 E-value=1.4e+02 Score=19.20 Aligned_cols=35 Identities=11% Similarity=0.221 Sum_probs=17.7
Q ss_pred HHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCC
Q psy16202 72 ELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRD 113 (218)
Q Consensus 72 ~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e 113 (218)
.|+..+...+++..-... .-+.+++..+.+..|.+
T Consensus 6 ~Fl~~~~~d~~L~~~l~~-------~~~~e~~~~lA~~~Gf~ 40 (64)
T TIGR03798 6 AFLEKVKTDPDLREKLKA-------AEDPEDRVAIAKEAGFE 40 (64)
T ss_pred HHHHHHHcCHHHHHHHHH-------cCCHHHHHHHHHHcCCC
Confidence 344444455555544443 23356666666666544
No 174
>cd08032 LARP_7 La RNA-binding domain of La-related protein 7. LARP7 is a component of the 7SK snRNP, a key factor in the regulation of RNA polymerase II transcription. 7SK functionality is dependent on the presence of LARP7, which is thought to stabilize the 7SK RNA by interacting with its 3' end. The release of 7SK RNA from P-TEFb/HEXIM/7SK complexes activates the cyclin-dependent kinase P-TEFb, which in turn phosphorylates the C-terminal domain of RNA pol II and mediates a transition into productive transcription elongation.
Probab=24.71 E-value=43 Score=23.15 Aligned_cols=24 Identities=8% Similarity=0.163 Sum_probs=19.5
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHH
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSR 32 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~ 32 (218)
...+|+...+.+.+|.||+.-+..
T Consensus 24 ~D~fL~~~~~~~~dG~Vpl~~i~~ 47 (82)
T cd08032 24 KDRFLREQIEKSRDGYIDISLLVS 47 (82)
T ss_pred cCHHHHHHhcCCCCCCEeHHHHhc
Confidence 455788888888999999998865
No 175
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=24.22 E-value=2.6e+02 Score=22.22 Aligned_cols=18 Identities=11% Similarity=0.006 Sum_probs=14.6
Q ss_pred hhcCCCCcccHHHHHHHh
Q psy16202 17 MLVEAKGKVPVKVVSRTF 34 (218)
Q Consensus 17 fd~d~~G~I~~~el~~~l 34 (218)
||+|+||.|..-|.-+.+
T Consensus 16 FDrd~DGiI~P~dTy~GF 33 (174)
T PF05042_consen 16 FDRDKDGIIYPWDTYQGF 33 (174)
T ss_pred eCCCCCeeECHHHHHHHH
Confidence 699999999988875443
No 176
>cd07323 LAM LA motif RNA-binding domain. This domain is found at the N-terminus of La RNA-binding proteins as well as in other related proteins. Typically, the domain co-occurs with an RNA-recognition motif (RRM), and together these domains function to bind primary transcripts of RNA polymerase III in the La autoantigen (Lupus La protein, LARP3, or Sjoegren syndrome type B antigen, SS-B). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=23.77 E-value=1.3e+02 Score=20.16 Aligned_cols=39 Identities=15% Similarity=0.311 Sum_probs=25.7
Q ss_pred HHHHHHhhhhcCCCCcccHHHHHHH--hcC-CCcHHHHHHHHHH
Q psy16202 9 LLSWMRLGMLVEAKGKVPVKVVSRT--FAS-GKTEKLVYQTMAE 49 (218)
Q Consensus 9 ~~~wl~~~fd~d~~G~I~~~el~~~--l~~-~~~~~~i~~~~~~ 49 (218)
+..||+..+ +.+|.|+++.|.++ ++. ..+.+.|.++++.
T Consensus 19 ~D~fL~~~~--~~~g~Vpl~~i~~F~r~k~l~~~~~~i~~Al~~ 60 (75)
T cd07323 19 KDRFLRSLM--DDDGWVPLSLLASFNRVKKLTTDVELILEALRD 60 (75)
T ss_pred cCHHHHHhc--CCCCCEEHHHHhCchHHHHHcCCHHHHHHHHHh
Confidence 456788766 88999999999653 222 2344566666654
No 177
>KOG4403|consensus
Probab=23.61 E-value=1.5e+02 Score=27.20 Aligned_cols=30 Identities=17% Similarity=0.416 Sum_probs=24.4
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHh
Q psy16202 81 NDIEELFQSITKGKAETINLDQFITFLNEK 110 (218)
Q Consensus 81 ~ei~~iF~~~d~~~~g~it~~ef~~FL~~~ 110 (218)
+-|+.|-+.+|.|.+|.|+.+|=-.||++.
T Consensus 68 EAir~iHrqmDDD~nG~Id~~ESdeFlrEd 97 (575)
T KOG4403|consen 68 EAIRDIHRQMDDDHNGSIDVEESDEFLRED 97 (575)
T ss_pred HHHHHHHHhcccccCCCcccccchHHHHHH
Confidence 457778888888888888888888888875
No 178
>PF09441 Abp2: ARS binding protein 2; InterPro: IPR018562 This DNA-binding protein binds to the autonomously replicating sequence (ARS) binding element. It may play a role in regulating the cell cycle response to stress signals [].
Probab=23.51 E-value=1.5e+02 Score=23.24 Aligned_cols=37 Identities=14% Similarity=0.310 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcchhhhhccCCcCHHHHHHHHcCCCCC
Q psy16202 126 EKRALEIINTYEQNEEIRNEKSFSKDGLIRYLMSDENA 163 (218)
Q Consensus 126 ~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~s~~n~ 163 (218)
.++..+-|++|.--- .+==..+.++.|..||++..|.
T Consensus 89 k~qStQKvqQYaVRL-KRWM~aMHVDAFFeYllg~~~~ 125 (175)
T PF09441_consen 89 KGQSTQKVQQYAVRL-KRWMRAMHVDAFFEYLLGKPHP 125 (175)
T ss_pred cccchHHHHHHHHHH-HHHHHHhhHHHHHHHHhCCCCc
Confidence 344555566665320 0001348899999999987653
No 179
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=22.31 E-value=1.5e+02 Score=16.54 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=15.6
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHH
Q psy16202 27 VKVVSRTFASGKTEKLVYQTMAE 49 (218)
Q Consensus 27 ~~el~~~l~~~~~~~~i~~~~~~ 49 (218)
++.+.+.|....++++|.+.++.
T Consensus 11 v~~i~~~l~~~~t~~~I~~~l~~ 33 (39)
T PF05184_consen 11 VKEIEKLLKNNKTEEEIKKALEK 33 (39)
T ss_dssp HHHHHHHHHSTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCccHHHHHHHHHH
Confidence 45667777766677777776654
No 180
>KOG0039|consensus
Probab=21.64 E-value=1.3e+02 Score=29.07 Aligned_cols=85 Identities=9% Similarity=0.183 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhc
Q psy16202 65 FTFDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRN 144 (218)
Q Consensus 65 l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~ 144 (218)
++++||. .......+.++-.|..+|. .+|.++.+++.+++...-.... ...+.+ .+.+-...++++.+++ .
T Consensus 4 ~~~~~~~--~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~----~ 74 (646)
T KOG0039|consen 4 ISFQELK--ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW-LSLIKK-QTEEYAALIMEELDPD----H 74 (646)
T ss_pred cchhhhc--ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh-hhhhhh-hhhHHHHHhhhhcccc----c
Confidence 7888887 2223346778888888887 4578999999988876532211 111111 1233344455555544 3
Q ss_pred cCCcCHHHHHHHHc
Q psy16202 145 EKSFSKDGLIRYLM 158 (218)
Q Consensus 145 ~g~ls~~~F~~~L~ 158 (218)
.+.+...++...|.
T Consensus 75 ~~y~~~~~~~~ll~ 88 (646)
T KOG0039|consen 75 KGYITNEDLEILLL 88 (646)
T ss_pred cceeeecchhHHHH
Confidence 34555555544443
No 181
>KOG1029|consensus
Probab=21.01 E-value=1.3e+02 Score=29.80 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhcchhhhhccCCcCHHHHHHHHc
Q psy16202 82 DIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYEQNEEIRNEKSFSKDGLIRYLM 158 (218)
Q Consensus 82 ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~~~~~~~~~g~ls~~~F~~~L~ 158 (218)
....+|+..|+...|++|-..-+..|.+-+ +....+..|..--|.| ++|.|+.++|+--|.
T Consensus 196 KY~QlFNa~DktrsG~Lsg~qaR~aL~qS~------------Lpq~~LA~IW~LsDvd----~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 196 KYRQLFNALDKTRSGYLSGQQARSALGQSG------------LPQNQLAHIWTLSDVD----GDGKLSADEFILAMH 256 (1118)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHhcC------------CchhhHhhheeeeccC----CCCcccHHHHHHHHH
Confidence 457899999999999999999998886653 2334445554444444 889999999986543
No 182
>PF08339 RTX_C: RTX C-terminal domain; InterPro: IPR013550 This domain describes the C-terminal region of various bacterial haemolysins and leukotoxins, which belong to the RTX family of toxins. These are produced by various Gram negative bacteria, such as Escherichia coli (P09983 from SWISSPROT) and Actinobacillus pleuropneumoniae (P15377 from SWISSPROT). RTX toxins may interact with lipopolysaccharide (LPS) to functionally impair and eventually kill leukocytes []. This region is found in association with the RTX N-terminal domain (IPR003995 from INTERPRO) and multiple hemolysin-type calcium-binding repeats (IPR001343 from INTERPRO).
Probab=20.48 E-value=1.2e+02 Score=23.27 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=39.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCchHHHHHHHHHcCCCCCcccHHHHHHHHHHhcCCccccccccccCCHHHHHHHHHHhc
Q psy16202 60 IEPADFTFDKFYELYHKICPRNDIEELFQSITKGKAETINLDQFITFLNEKQRDPRLNEILYPLYDEKRALEIINTYE 137 (218)
Q Consensus 60 ~~~g~l~f~eF~~~~~~l~~r~ei~~iF~~~d~~~~g~it~~ef~~FL~~~Q~e~~~~~~~~~~~t~~~~~~li~~~~ 137 (218)
.+.+.|+|..+..--........|++|+ ++++. +||.+.+-+.+...|.-. ++..++.+....|.
T Consensus 27 ~~~~~itiknWFk~~~~~~~n~KIEqIi---dKnG~-~ITs~qld~l~~~~~~g~---------i~~~~l~~~a~~y~ 91 (145)
T PF08339_consen 27 DNSNSITIKNWFKEDNSGNYNHKIEQII---DKNGR-RITSDQLDKLLEDKGKGK---------ITSYQLSNNAENYK 91 (145)
T ss_pred CCCCcEEehhhhhccccccchhhHHHHh---cCCCC-EEcHhHHHHHhcccccCc---------chHHHHHHHHHhhc
Confidence 4567788887754222111334566664 45664 899999999998666433 34455555555555
No 183
>PF11593 Med3: Mediator complex subunit 3 fungal; InterPro: IPR020998 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. This entry represents the subunit Med3, which is a physical target for Cyc8-Tup1, a yeast transcriptional co-repressor []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=20.47 E-value=2.6e+02 Score=24.95 Aligned_cols=50 Identities=20% Similarity=0.355 Sum_probs=35.7
Q ss_pred CcccHHHHHHHhcCC-CcHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHHcC
Q psy16202 23 GKVPVKVVSRTFASG-KTEKLVYQTMAELGLPSGKNDVIEPADFTFDKFYELYHKIC 78 (218)
Q Consensus 23 G~I~~~el~~~l~~~-~~~~~i~~~~~~~~~~~~k~d~~~~g~l~f~eF~~~~~~l~ 78 (218)
++++++||...|... .+++.|.+.+.+.. |.+=.=+|-|.||+..+..+.
T Consensus 6 ~~~~LeeLe~kLa~~d~~Kd~V~~~I~ea~------~sILPlRL~FNeFi~tma~Ie 56 (379)
T PF11593_consen 6 PNLKLEELEEKLASNDNSKDSVMDKISEAQ------DSILPLRLQFNEFIQTMANIE 56 (379)
T ss_pred CCCcHHHHHHHHhcCCchHHHHHHHHHHHH------hccccHHHHHHHHHHHHHHhh
Confidence 568899998888753 35566777777652 334345689999999998764
Done!