RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16203
(806 letters)
>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 349
Score = 341 bits (875), Expect = e-111
Identities = 151/314 (48%), Positives = 187/314 (59%), Gaps = 14/314 (4%)
Query: 453 IDKIIKGKRCVELDCWDGKGEDEEPIITHGKAMCTDILFKDVIYALRDTAFVTSDFPVIL 512
++ G RCVELDCW GK DEEPIITHG M TDI FK+ I A+ ++AF TS +P+IL
Sbjct: 35 RQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIIL 94
Query: 513 SFENHCCKT-QQYKLAKYCDEILGDLLLKECLPDYPCEPGVPLPPPSLLKRKILIKNKRL 571
SFENH QQ K+A+YC I GD+LL E L +P +PGVPLP P L+ KILIKNK+
Sbjct: 95 SFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKN 154
Query: 572 KQEVEKRELELFRQGQFVIEDEEKEDATAAIPVPEEKKDEPEPEAD-------------A 618
+ + A E +++E E E +
Sbjct: 155 QFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKM 214
Query: 619 PPPIQYTGSTTNVHPWLSSMVNYAQPIKFQGFDVAEQKNIHHNMSSFAETAGLGYLKSQA 678
G + +SS+VNY QP KF F+ + QKN + +SSF E L +
Sbjct: 215 QSDEGTAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKAS 274
Query: 679 IEFVNYNKRQMSRIYPKGTRADSSNYMPQVFWNAGCQMVSLNFQTPDLPMQLNQGKFEYN 738
++FV+YNKRQMSRIYPKGTR DSSNYMPQ+FWNAGCQMV+LNFQT DLPMQ N FE+N
Sbjct: 275 VQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFN 334
Query: 739 GNCGYLLKPDFMRR 752
G GYLLK +FMRR
Sbjct: 335 GQSGYLLKHEFMRR 348
Score = 220 bits (562), Expect = 9e-66
Identities = 108/259 (41%), Positives = 140/259 (54%), Gaps = 16/259 (6%)
Query: 154 NEPIITHGKAMCTDILFKDVIYALRDTAFVTSDFPVILSFENHCCKT-QQYKLAKYCDEI 212
EPIITHG M TDI FK+ I A+ ++AF TS +P+ILSFENH QQ K+A+YC I
Sbjct: 57 EEPIITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTI 116
Query: 213 LGDLLLKECLPDYPCEPGVPLPPPSLLKRKILIKNKRLKQEVEKRELELFRQGQFVIEDE 272
GD+LL E L +P +PGVPLP P L+ KILIKNK+ + +
Sbjct: 117 FGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPP 176
Query: 273 EKEDATAAIPVPEEKKDEPEPEAD-------------APPPIQYTGSTTNVHPWLSSMVN 319
A E +++E E E + G + +SS+VN
Sbjct: 177 SAPAVWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVN 236
Query: 320 YAQPIKFQGFDVAEQKNIHHNMSSFAETAGLGYLKSQAIEFVNYNKRQMSRIYPKGTRAD 379
Y QP KF F+ + QKN + +SSF E L +++FV+YNKRQMSRIYPKGTR D
Sbjct: 237 YIQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMD 296
Query: 380 SSNYMPQV--KYGVLIVIL 396
SSNYMPQ+ G +V L
Sbjct: 297 SSNYMPQMFWNAGCQMVAL 315
Score = 35.4 bits (81), Expect = 0.025
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 111 SQNTCEPGVPLPPPSLLKRKILIKNKRLKQEVEKRELE 148
+ +PGVPLP P L+ KILIKNK+ + +
Sbjct: 127 EKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSK 164
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 327
Score = 336 bits (862), Expect = e-110
Identities = 118/315 (37%), Positives = 160/315 (50%), Gaps = 21/315 (6%)
Query: 451 ATIDKIIKGKRCVELDCWDGKGEDEEPIITHGKAMCTDILFKDVIYALRDTAFVTSDFPV 510
A I + KG RC+ELDCWDG ++EPII HG + ILF DV+ A+RD AF S +PV
Sbjct: 30 AYIRALCKGCRCLELDCWDG--PNQEPIIYHGYTFTSKILFCDVLRAIRDYAFKASPYPV 87
Query: 511 ILSFENHCCKTQQYKLAKYCDEILGDLLLKECLPDYPCEPGVPLPPPSLLKRKILIKNKR 570
ILS ENHC QQ +A++ ILG +LL + L LP P LK KIL+K K+
Sbjct: 88 ILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVT----TSLPSPEQLKGKILLKGKK 143
Query: 571 LKQEVEKRELELFRQGQFVIEDEEKEDATAAIPVPEEKKDEPEPEADAPPPIQYTGSTTN 630
L + E + E + + + +
Sbjct: 144 LGGLLP--------------AGGENGSEATDVSDEVEAAEMEDEAVRSQVQHKPKEDKLK 189
Query: 631 VHPWLSSMVNYAQPIKFQGFDVAEQKN-IHHNMSSFAETAGLGYLKSQAIEFVNYNKRQM 689
+ P LS M+ Y + + F GF + M+SF+E+ L L+ FV +N +
Sbjct: 190 LVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCL 249
Query: 690 SRIYPKGTRADSSNYMPQVFWNAGCQMVSLNFQTPDLPMQLNQGKFEYNGNCGYLLKPDF 749
SRIYP G R DSSNY P WN GCQ+V+LNFQTP M + G F+ NG CGY+LKP F
Sbjct: 250 SRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAF 309
Query: 750 MRRSDRSFDPFAESP 764
+R + +F+ A +
Sbjct: 310 LRDPNTTFNSRALTQ 324
Score = 206 bits (526), Expect = 8e-61
Identities = 82/246 (33%), Positives = 110/246 (44%), Gaps = 21/246 (8%)
Query: 154 NEPIITHGKAMCTDILFKDVIYALRDTAFVTSDFPVILSFENHCCKTQQYKLAKYCDEIL 213
EPII HG + ILF DV+ A+RD AF S +PVILS ENHC QQ +A++ IL
Sbjct: 52 QEPIIYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAIL 111
Query: 214 GDLLLKECLPDYPCEPGVPLPPPSLLKRKILIKNKRLKQEVEKRELELFRQGQFVIEDEE 273
G +LL + L LP P LK KIL+K K+L + E
Sbjct: 112 GPILLDQPLDGVT----TSLPSPEQLKGKILLKGKKLGGLLP--------------AGGE 153
Query: 274 KEDATAAIPVPEEKKDEPEPEADAPPPIQYTGSTTNVHPWLSSMVNYAQPIKFQGFDVAE 333
+ E + + + + + P LS M+ Y + + F GF
Sbjct: 154 NGSEATDVSDEVEAAEMEDEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPG 213
Query: 334 QKN-IHHNMSSFAETAGLGYLKSQAIEFVNYNKRQMSRIYPKGTRADSSNYMPQV--KYG 390
+ M+SF+E+ L L+ FV +N +SRIYP G R DSSNY P G
Sbjct: 214 TSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGG 273
Query: 391 VLIVIL 396
IV L
Sbjct: 274 CQIVAL 279
Score = 32.7 bits (74), Expect = 0.16
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 107 DIWKSQNTCEPGVPLPPPSLLKRKILIKNKRLKQEVEK 144
I Q LP P LK KIL+K K+L +
Sbjct: 113 PILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPA 150
>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 131
Score = 75.4 bits (185), Expect = 9e-17
Identities = 16/83 (19%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 13 VPQPLLDGCVFDRWNEDKDSSDLEPNCVFKVDTYGFFIFWKSENRDGDVIELCQVSDIRA 72
V L G F +W+++ + + + +VD G++++W ++++ + +++ + D R
Sbjct: 3 VKAYLSQGERFIKWDDE---TTVASPVILRVDPKGYYLYWTYQSKEMEFLDITSIRDTRF 59
Query: 73 GGVPKTWQEG-LRKITHNNKMNN 94
G K + LR + + + +N
Sbjct: 60 GKFAKMPKSQKLRDVFNMDFPDN 82
Score = 32.2 bits (73), Expect = 0.085
Identities = 8/81 (9%), Positives = 18/81 (22%), Gaps = 12/81 (14%)
Query: 14 PQPLLDGCVFDRWNEDKDSSDLEPNCVFKVDTYGFFIFWKSENRDGDVIELCQVSDIRAG 73
+ + D +N D + + + D +
Sbjct: 63 AKMPKSQKLRDVFNMDFPDNSFLLKT--------LTVVSGPDMVDLTFHNFVSYKENVG- 113
Query: 74 GVPKTWQEGLRKITHNNKMNN 94
K W E + + + N
Sbjct: 114 ---KAWAEDVLALVKHPLTAN 131
>d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C
{Listeria monocytogenes [TaxId: 1639]}
Length = 274
Score = 51.4 bits (122), Expect = 2e-07
Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 13/151 (8%)
Query: 447 KTQTATI-DKIIKGKRCVELDCWDGKGEDEEPIITHGKAMCTDILFKDVIYALRDTAFVT 505
+TQT ++ ++ G R +++ D I HG + + V+ +
Sbjct: 44 QTQTMSLYQQLEAGIRYIDIRAKD------NLNIYHGP-IFLNASLSGVLETITQFLKKN 96
Query: 506 SDFPVILSFEN-HCCKTQQYKLAKYCDEILGDLLLKECLPDYPCEPGVPLPPPSLLKRKI 564
+I+ ++ + I D P +P K +
Sbjct: 97 PKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYT--TPRTDTSNKIPTLKDVRGKILL 154
Query: 565 LIKNKRLKQEV--EKRELELFRQGQFVIEDE 593
L +N K V ++ F VI+D+
Sbjct: 155 LSENHTKKPLVINSRKFGMQFGAPNQVIQDD 185
Score = 44.4 bits (104), Expect = 3e-05
Identities = 18/122 (14%), Positives = 35/122 (28%), Gaps = 6/122 (4%)
Query: 154 NEPIITHGKAMCTDILFKDVIYALRDTAFVTSDFPVILSFEN-HCCKTQQYKLAKYCDEI 212
+ I HG + + V+ + +I+ ++ + I
Sbjct: 67 DNLNIYHGP-IFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINI 125
Query: 213 LGDLLLKECLPDYPCEPGVPLPPPSLLKRKILIKNKRLKQEV--EKRELELFRQGQFVIE 270
D P +P K +L +N K V ++ F VI+
Sbjct: 126 YKDYFYT--TPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQ 183
Query: 271 DE 272
D+
Sbjct: 184 DD 185
>d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C
{Bacillus cereus [TaxId: 1396]}
Length = 296
Score = 44.5 bits (104), Expect = 3e-05
Identities = 16/119 (13%), Positives = 34/119 (28%), Gaps = 10/119 (8%)
Query: 447 KTQTATI-DKIIKGKRCVELDCWDGKGEDEEPIITHGKAMCTDILFKDVIYALRDTAFVT 505
TQ ++ G R ++ D ++ HG + + + I +
Sbjct: 49 MTQEYDFRYQMDHGARIFDIRGRLTD--DNTIVLHHG-PLYLYVTLHEFINEAKQFLKDN 105
Query: 506 SDFPVILSFENHCCKTQQYKLAKYCDEILGDLLLKECLPDYPCEPGVPLPPPSLLKRKI 564
+I+S + Y+ K ++ K+ D + KI
Sbjct: 106 PSETIIMSLKKE------YEDMKGAEDSFSSTFEKKYFVDPIFLKTEGNIKLGDARGKI 158
Score = 34.8 bits (79), Expect = 0.033
Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 7/93 (7%)
Query: 151 RQGNEPIITHGKAMCTDILFKDVIYALRDTAFVTSDFPVILSFENHCCKTQQYKLAKYCD 210
N ++ HG + + + I + +I+S + Y+ K +
Sbjct: 73 TDDNTIVLHHG-PLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKE------YEDMKGAE 125
Query: 211 EILGDLLLKECLPDYPCEPGVPLPPPSLLKRKI 243
+ K+ D + KI
Sbjct: 126 DSFSSTFEKKYFVDPIFLKTEGNIKLGDARGKI 158
>d2c42a4 c.64.1.1 (A:416-668) Pyruvate-ferredoxin oxidoreductase,
PFOR, domain III {Desulfovibrio africanus [TaxId: 873]}
Length = 253
Score = 27.3 bits (60), Expect = 6.4
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 9/61 (14%)
Query: 238 LLKRKILIKNKRLKQEVEKRELELFRQGQFVIEDEEKEDATAAIPVPEEKKDEPEPEADA 297
LLK+ I + +++ K + Q + P+ KD P
Sbjct: 167 LLKKSIHKAYGKKGEKIVKMNTDAVDQA---------VTSLQEFKYPDSWKDAPAETKAE 217
Query: 298 P 298
P
Sbjct: 218 P 218
Score = 27.3 bits (60), Expect = 6.4
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 9/61 (14%)
Query: 559 LLKRKILIKNKRLKQEVEKRELELFRQGQFVIEDEEKEDATAAIPVPEEKKDEPEPEADA 618
LLK+ I + +++ K + Q + P+ KD P
Sbjct: 167 LLKKSIHKAYGKKGEKIVKMNTDAVDQA---------VTSLQEFKYPDSWKDAPAETKAE 217
Query: 619 P 619
P
Sbjct: 218 P 218
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.415
Gapped
Lambda K H
0.267 0.0531 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,154,077
Number of extensions: 157861
Number of successful extensions: 374
Number of sequences better than 10.0: 1
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 18
Length of query: 806
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 713
Effective length of database: 1,130,706
Effective search space: 806193378
Effective search space used: 806193378
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.2 bits)