Query psy16205
Match_columns 109
No_of_seqs 132 out of 1024
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 23:30:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qr0_A Phospholipase C-beta (P 99.9 5.3E-28 1.8E-32 200.5 9.3 106 1-106 675-780 (816)
2 3ohm_B 1-phosphatidylinositol- 99.9 2.6E-27 9E-32 197.5 7.8 103 1-105 750-853 (885)
3 2zkm_X 1-phosphatidylinositol- 99.9 1.2E-23 3.9E-28 174.4 8.2 94 1-97 703-799 (799)
4 1djx_A PLC-D1, phosphoinositid 99.9 1E-22 3.5E-27 165.0 8.2 92 2-97 529-624 (624)
5 1rlw_A Phospholipase A2, CALB 99.6 9E-15 3.1E-19 95.1 10.0 79 11-96 41-122 (126)
6 2dmh_A Myoferlin; beta-sandwic 99.6 6.6E-15 2.2E-19 97.5 9.0 83 11-97 38-133 (140)
7 2ep6_A MCTP2 protein; beta san 99.6 5.7E-15 2E-19 97.2 6.1 81 12-96 46-131 (133)
8 3b7y_A E3 ubiquitin-protein li 99.5 4.7E-14 1.6E-18 94.7 10.2 82 11-96 58-152 (153)
9 3kwu_A MUNC13-1; calcium bindi 99.5 1.8E-13 6.3E-18 91.3 11.1 82 11-96 49-146 (148)
10 1wfj_A Putative elicitor-respo 99.5 3.1E-14 1.1E-18 93.7 7.0 85 12-102 43-135 (136)
11 3pyc_A E3 ubiquitin-protein li 99.5 1.3E-13 4.5E-18 90.5 9.6 80 11-95 39-131 (132)
12 3m7f_B E3 ubiquitin-protein li 99.5 3.2E-13 1.1E-17 92.9 11.3 83 11-97 46-141 (176)
13 3l9b_A Otoferlin; C2-domain, b 99.5 5.6E-14 1.9E-18 95.4 6.9 87 11-102 48-143 (144)
14 1wfm_A Synaptotagmin XIII; C2 99.4 4.5E-13 1.5E-17 89.0 8.3 68 11-81 59-135 (138)
15 2nq3_A Itchy homolog E3 ubiqui 99.4 2.8E-13 9.5E-18 93.9 6.5 85 11-100 68-164 (173)
16 2fk9_A Protein kinase C, ETA t 99.4 4.2E-13 1.4E-17 92.1 6.4 72 13-96 74-156 (157)
17 2b3r_A Phosphatidylinositol-4- 99.4 7.5E-13 2.6E-17 87.6 6.6 66 11-78 56-130 (134)
18 1gmi_A Protein kinase C, epsil 99.4 1.8E-12 6.2E-17 85.7 8.2 73 13-97 52-133 (136)
19 1rsy_A Synaptotagmin I; calciu 99.4 4E-13 1.4E-17 90.4 5.0 65 11-78 77-150 (152)
20 2cjt_A UNC-13 homolog A, MUNC1 99.4 2.4E-12 8.1E-17 85.4 8.7 53 13-68 34-89 (131)
21 3f04_A Synaptotagmin-1; C2A, c 99.4 6.7E-13 2.3E-17 88.1 5.0 63 12-77 70-141 (143)
22 3fdw_A Synaptotagmin-like prot 99.4 5.7E-13 1.9E-17 89.1 4.6 69 11-82 61-138 (148)
23 3n5a_A Synaptotagmin-7; calciu 99.3 1.4E-13 4.9E-18 90.4 0.4 70 11-83 53-129 (138)
24 2dmg_A KIAA1228 protein; beta- 99.3 1.4E-12 4.6E-17 86.5 4.5 69 11-82 60-139 (142)
25 1w15_A Synaptotagmin IV; metal 99.3 3.9E-13 1.3E-17 90.3 1.8 69 12-83 68-143 (153)
26 2cm5_A Rabphilin-3A; protein t 99.3 4.2E-13 1.4E-17 91.4 1.7 70 11-83 74-150 (166)
27 2z0u_A WW domain-containing pr 99.3 2E-12 6.8E-17 88.0 5.0 63 12-77 82-154 (155)
28 1a25_A CALB, protein kinase C 99.3 3.1E-12 1E-16 85.6 5.8 66 11-79 68-140 (149)
29 3rdl_A Protein kinase C alpha 99.3 2.4E-12 8.2E-17 84.5 4.5 66 11-79 53-125 (137)
30 2d8k_A Synaptotagmin VII; exoc 99.3 3.8E-12 1.3E-16 84.4 5.4 67 11-80 61-137 (141)
31 1ugk_A Synaptotagmin IV, KIAA1 99.3 6.7E-12 2.3E-16 82.9 6.5 59 11-71 58-122 (138)
32 2r83_A Synaptotagmin-1; C2A-C2 99.3 2.5E-11 8.7E-16 88.3 10.2 81 12-95 55-145 (284)
33 3fbk_A RGS3, RGP3, regulator o 99.3 6.1E-12 2.1E-16 84.7 6.1 68 11-81 63-140 (153)
34 2cjs_A UNC-13 homolog A, MUNC1 99.3 6.1E-12 2.1E-16 86.8 6.0 53 13-68 43-98 (167)
35 2chd_A Rabphilin-3A, exophilin 99.3 4.4E-12 1.5E-16 84.0 5.1 59 11-71 66-130 (142)
36 2q3x_A Regulating synaptic mem 99.3 5.6E-12 1.9E-16 86.6 5.7 66 12-81 69-142 (171)
37 1v27_A Regulating synaptic mem 99.3 9.2E-12 3.1E-16 82.0 6.3 69 11-82 58-137 (141)
38 2enp_A B/K protein; C2 type 1, 99.3 2.6E-12 9E-17 85.6 3.5 64 12-78 69-141 (147)
39 1tjx_A Similar to synaptotagmi 99.2 3.1E-12 1.1E-16 86.4 3.3 60 11-73 62-127 (159)
40 1rh8_A Piccolo protein; beta-s 99.2 1.6E-12 5.4E-17 86.0 0.8 68 12-81 65-141 (142)
41 2bwq_A Regulating synaptic mem 99.2 5.7E-11 1.9E-15 77.2 6.3 64 10-76 54-128 (129)
42 3jzy_A Intersectin 2; C2 domai 99.2 6.5E-11 2.2E-15 92.4 7.6 79 11-97 419-508 (510)
43 1dqv_A Synaptotagmin III; beta 99.1 1.6E-10 5.5E-15 85.1 7.4 82 11-95 55-147 (296)
44 2r83_A Synaptotagmin-1; C2A-C2 99.1 1E-10 3.4E-15 85.1 4.3 59 12-73 188-252 (284)
45 3nsj_A Perforin-1; pore formin 99.1 1.2E-09 4.3E-14 87.3 10.9 73 12-96 426-503 (540)
46 1cjy_A CPLA2, protein (cytosol 99.0 3E-10 1E-14 93.8 6.1 65 11-78 56-126 (749)
47 3bxj_A RAS GTPase-activating p 98.9 2.5E-10 8.6E-15 89.9 0.9 66 12-80 40-118 (483)
48 1dqv_A Synaptotagmin III; beta 98.8 2.2E-10 7.4E-15 84.4 -2.2 56 11-69 189-250 (296)
49 3pfq_A PKC-B, PKC-beta, protei 98.6 2.8E-08 9.5E-13 80.6 3.2 65 11-78 209-280 (674)
50 1yrk_A NPKC-delta, protein kin 97.5 0.00056 1.9E-08 45.1 7.2 52 14-69 45-96 (126)
51 2enj_A NPKC-theta, protein kin 97.3 0.00079 2.7E-08 45.0 6.5 66 20-96 56-129 (138)
52 3l4c_A Dedicator of cytokinesi 96.3 0.024 8.1E-07 40.6 8.0 65 11-78 77-156 (220)
53 2yrb_A Protein fantom; beta sa 88.7 1.8 6.2E-05 29.2 6.7 86 13-102 56-155 (156)
54 2wxf_A Phosphatidylinositol-4, 87.9 1.4 4.9E-05 37.4 7.0 53 22-76 262-337 (940)
55 3hhm_A Phosphatidylinositol-4, 86.7 1.7 5.8E-05 37.6 6.8 59 14-76 395-468 (1091)
56 1e7u_A Phosphatidylinositol 3- 84.0 1.9 6.6E-05 36.7 5.9 53 22-76 264-343 (961)
57 2y3a_A Phosphatidylinositol-4, 75.7 2.2 7.6E-05 36.9 3.6 53 22-76 398-483 (1092)
58 2iia_A Sensory rhodopsin trans 52.3 42 0.0014 21.8 5.5 46 39-86 46-92 (131)
59 4g5a_A Uncharacterized protein 51.6 37 0.0013 20.4 5.2 62 18-81 13-91 (99)
60 3e8v_A Possible transglutamina 31.0 66 0.0023 19.1 3.6 21 73-93 4-24 (82)
61 3l48_A Outer membrane usher pr 20.5 88 0.003 18.7 2.9 8 46-53 11-18 (94)
No 1
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.95 E-value=5.3e-28 Score=200.47 Aligned_cols=106 Identities=54% Similarity=1.012 Sum_probs=92.7
Q ss_pred CcccCCCCccceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCCCCeeEEEEEeCCccCCcceEEEeecCC
Q psy16205 1 MYGLPTDTIRKEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDENGKLLGQRILPLDGLQAGYRHISLRTEA 80 (109)
Q Consensus 1 i~g~~~d~~~~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d~~~iG~~~lpl~~l~~G~r~v~L~d~~ 80 (109)
++|.|.|+.++++||+++++||+||+|||+.|.|..|..|++++|+|+|||+++++||++++||++|++|||+|||+|.+
T Consensus 675 l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~dddfiG~~~ipL~~L~~GyR~vpL~~~~ 754 (816)
T 3qr0_A 675 MYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEENGKFIGHRVMPLDGIKPGYRHVPLRNES 754 (816)
T ss_dssp EESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETTSCEEEEEEEESTTCCCEEEEEEEECTT
T ss_pred EeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecCCCeeeEEEEEHHHcCCcceEEEEeCCC
Confidence 46888888766789999999999999999339996478899999999999999999999999999999999999999999
Q ss_pred CCCCCCCEEEEEEEEEEccCCCcCCC
Q psy16205 81 NFPMSLPMLFCNIELKIYVPDGFEGN 106 (109)
Q Consensus 81 g~~~~~~~l~v~i~~~~~~~~~~~~~ 106 (109)
|+++..++|||+|++++|+||++++.
T Consensus 755 g~~~~~atLfv~i~~~~~~~~~~~~~ 780 (816)
T 3qr0_A 755 NRPLGLASVFAHIVAKDYVSDAFADF 780 (816)
T ss_dssp SCEEEEEEEEEEEEEEECCC------
T ss_pred CCCCCceEEEEEEEEEecCchhHHHH
Confidence 99999999999999999999999875
No 2
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.94 E-value=2.6e-27 Score=197.47 Aligned_cols=103 Identities=48% Similarity=0.884 Sum_probs=95.1
Q ss_pred CcccCCCCccceEeeeeecCCCCCCEECc-cceEEeEEecCCCcEEEEEEEeCCCCeeEEEEEeCCccCCcceEEEeecC
Q psy16205 1 MYGLPTDTIRKEFRTRLCPSNGLNPVYNE-EPFLFRKVVLPDLAVLRFGVYDENGKLLGQRILPLDGLQAGYRHISLRTE 79 (109)
Q Consensus 1 i~g~~~d~~~~k~kT~~i~~ng~nPvWne-~~f~f~~v~~~~l~~l~f~V~d~d~~~iG~~~lpl~~l~~G~r~v~L~d~ 79 (109)
++|.|.|+.+ ++||+++++||+||+||| + |.|..|..|++++|+|+|||+|+++||++++||++|++|||+|||+|.
T Consensus 750 l~g~p~D~~~-k~kTkvi~~NglNPvWnEe~-F~F~~V~~pela~Lrf~V~D~dddfiG~~~lpL~~L~~GyR~vpL~~~ 827 (885)
T 3ohm_B 750 MFGLPVDTRR-KYRTRTSQGNSFNPVWDEEP-FDFPKVVLPTLASLRIAAFEEGGKFVGHRILPVSAIRSGYHYVCLRNE 827 (885)
T ss_dssp EESSTTTCBC-CCCCCCCSSCSSSCBCCCCC-EEEEEESCGGGCEEEEEEEETTTEEEEEEEEETTTCCCEEEEEEEECT
T ss_pred EeCCCccccc-ceeeEEeeCCCcCCeeccce-eEEeeEEcCCcCEEEEEEEcCCccEEeeEEEEHHHcCCCceEEEecCC
Confidence 4688888864 369999999999999999 6 999647789999999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEEEEEEEccCCCcCC
Q psy16205 80 ANFPMSLPMLFCNIELKIYVPDGFEG 105 (109)
Q Consensus 80 ~g~~~~~~~l~v~i~~~~~~~~~~~~ 105 (109)
+|+++..++|||+|++.+|+||++++
T Consensus 828 ~g~~l~~atLfv~i~~~~~~~~~~~~ 853 (885)
T 3ohm_B 828 ANQPLCLPALLIYTEASDYIPDDHQD 853 (885)
T ss_dssp TSCEEEEEEEEEEEEEEECCCGGGHH
T ss_pred CCCccCceEEEEEEEEEecCCccHHH
Confidence 99999999999999999999999875
No 3
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.89 E-value=1.2e-23 Score=174.38 Aligned_cols=94 Identities=43% Similarity=0.922 Sum_probs=86.7
Q ss_pred CcccCCCCccceEeee-eecCCCCCCEECc-cceEE-eEEecCCCcEEEEEEEeCCCCeeEEEEEeCCccCCcceEEEee
Q psy16205 1 MYGLPTDTIRKEFRTR-LCPSNGLNPVYNE-EPFLF-RKVVLPDLAVLRFGVYDENGKLLGQRILPLDGLQAGYRHISLR 77 (109)
Q Consensus 1 i~g~~~d~~~~k~kT~-~i~~ng~nPvWne-~~f~f-~~v~~~~l~~l~f~V~d~d~~~iG~~~lpl~~l~~G~r~v~L~ 77 (109)
++|.|.|+.+ ++||+ ++++||+||+||| + |.| . |..|++++|+|.|+|+|+++||++++||++|++|||++||.
T Consensus 703 l~g~p~d~~~-k~kTk~vv~~n~~NPvWnEe~-f~F~~-v~~~el~~Lr~~V~D~d~d~iG~~~ipl~~L~~G~r~v~L~ 779 (799)
T 2zkm_X 703 LFGLPGDPKR-RYRTKLSPSTNSINPVWKEEP-FVFEK-ILMPELASLRVAVMEEGNKFLGHRIIPINALNSGYHHLCLH 779 (799)
T ss_dssp EECCTTSCCC-CEECCCCSSSCCSSCBCCCCC-EEEEE-ESSGGGCEEEEEEEETTTEEEEEEEEEGGGBCCEEEEEEEE
T ss_pred EEecCCCccc-ceeecccccCCCCCCeeecce-EEEEE-EccCCccEEEEEEEEeCCCccceEeeehhhcCCCcEEEecc
Confidence 3688888764 47999 9988999999999 7 999 7 98999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCEEEEEEEEEE
Q psy16205 78 TEANFPMSLPMLFCNIELKI 97 (109)
Q Consensus 78 d~~g~~~~~~~l~v~i~~~~ 97 (109)
|..|+++..++|||+|+++|
T Consensus 780 ~~~g~~~~~~~Lfv~i~~~~ 799 (799)
T 2zkm_X 780 SESNMPLTMPALFIFLEMKD 799 (799)
T ss_dssp CTTCCEEEEEEEEEEEEEEC
T ss_pred CCCCCCCCceEEEEEEEEEC
Confidence 99999999999999999874
No 4
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.87 E-value=1e-22 Score=164.96 Aligned_cols=92 Identities=35% Similarity=0.595 Sum_probs=83.9
Q ss_pred cccCCCCccceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcceEEEee
Q psy16205 2 YGLPTDTIRKEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGYRHISLR 77 (109)
Q Consensus 2 ~g~~~d~~~~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r~v~L~ 77 (109)
+|.|.|+. ++||+++++||+||+|||+ |.|. +..|++++|+|+|||+| +++||++++||.+|++|||++||.
T Consensus 529 ~g~~~d~~--~~kTkvi~~ng~NP~WnE~-f~F~-v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~r~v~L~ 604 (624)
T 1djx_A 529 HGVGRDTG--SRQTAVITNNGFNPRWDME-FEFE-VTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLL 604 (624)
T ss_dssp ESSGGGCE--EEECCCCTTCSSSCEEEEE-EEEE-ESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEEEEEEEE
T ss_pred ecCCCCcc--eeecccccCCCCCCccCce-EEEE-EecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCcEEEeCC
Confidence 45566654 5799999988899999998 9998 99999999999999997 889999999999999999999999
Q ss_pred cCCCCCCCCCEEEEEEEEEE
Q psy16205 78 TEANFPMSLPMLFCNIELKI 97 (109)
Q Consensus 78 d~~g~~~~~~~l~v~i~~~~ 97 (109)
|.+|+++..++|||++++++
T Consensus 605 d~~g~~~~~~~L~v~i~~~~ 624 (624)
T 1djx_A 605 SKNGDQHPSATLFVKISIQD 624 (624)
T ss_dssp CTTSCEEEEEEEEEEEEEEC
T ss_pred CCCcCCCCceEEEEEEEEEC
Confidence 99999999999999999874
No 5
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.60 E-value=9e-15 Score=95.10 Aligned_cols=79 Identities=23% Similarity=0.331 Sum_probs=63.4
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC---CCeeEEEEEeCCccCCcceEEEeecCCCCCCCCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN---GKLLGQRILPLDGLQAGYRHISLRTEANFPMSLP 87 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d---~~~iG~~~lpl~~l~~G~r~v~L~d~~g~~~~~~ 87 (109)
.++||+++++ ++||+|||+ |.|. +..++...|.|+|||+| +++||++.+++..+..|+++..+.+-.. ..
T Consensus 41 ~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~----~~ 113 (126)
T 1rlw_A 41 SRKRTRHFNN-DINPVWNET-FEFI-LDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ----VT 113 (126)
T ss_dssp CCEECCCCTT-CSSCEEEEE-EEEE-ECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT----TE
T ss_pred ceEEccccCC-CCCCcccce-EEEE-ecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC----Cc
Confidence 4579998875 799999998 9998 87778889999999998 8899999999999999996543333222 35
Q ss_pred EEEEEEEEE
Q psy16205 88 MLFCNIELK 96 (109)
Q Consensus 88 ~l~v~i~~~ 96 (109)
++.+++++.
T Consensus 114 ~g~i~~~le 122 (126)
T 1rlw_A 114 EMVLEMSLE 122 (126)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 677777664
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=6.6e-15 Score=97.46 Aligned_cols=83 Identities=27% Similarity=0.231 Sum_probs=66.6
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecC---CCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc------eEEEee
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLP---DLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY------RHISLR 77 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~---~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~------r~v~L~ 77 (109)
.++||++++ +++||+|||+ |.|. +..+ ....|.|+|||+| +++||++.+++..+..|. +.+||.
T Consensus 38 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~ 114 (140)
T 2dmh_A 38 EKKKTKKVD-NELNPVWNEI-LEFD-LRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLL 114 (140)
T ss_dssp CEEECCCCC-SCSSCEEEEE-EEEE-CSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEE
T ss_pred EeEEeeeec-CCCCCccCcE-EEEE-ecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeecc
Confidence 357999886 4799999998 9998 8655 3478999999998 789999999999998773 335688
Q ss_pred cCCCCCCCCCEEEEEEEEEE
Q psy16205 78 TEANFPMSLPMLFCNIELKI 97 (109)
Q Consensus 78 d~~g~~~~~~~l~v~i~~~~ 97 (109)
+..++. ..++|.+.+++.+
T Consensus 115 ~~~~~~-~~G~l~l~~~~~p 133 (140)
T 2dmh_A 115 NEKGQD-TGATIDLVIGYDP 133 (140)
T ss_dssp CTTCCE-EEEEEEEEEEECC
T ss_pred CCCCCC-CCCEEEEEEEEEC
Confidence 877754 3488888887764
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.55 E-value=5.7e-15 Score=97.24 Aligned_cols=81 Identities=23% Similarity=0.376 Sum_probs=68.7
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc-eEEEeecCCCCCCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY-RHISLRTEANFPMSL 86 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~-r~v~L~d~~g~~~~~ 86 (109)
++||+++++ ++||+|||+ |.|. +..+ ...|.|+|||+| +++||++.+++..+..|. ++++|.+..++....
T Consensus 46 ~~kT~~~~~-t~nP~wne~-f~f~-~~~~-~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~ 121 (133)
T 2ep6_A 46 RLQTHTVYK-NLNPEWNKV-FTFP-IKDI-HDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFK 121 (133)
T ss_dssp EEECCCCSS-CSSCCCCEE-EEEE-ESCT-TCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCS
T ss_pred EEEeeeecC-CCCCccccE-EEEE-ecCC-CCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccc
Confidence 579998875 799999998 9998 8654 368999999987 789999999999999887 578999877766667
Q ss_pred CEEEEEEEEE
Q psy16205 87 PMLFCNIELK 96 (109)
Q Consensus 87 ~~l~v~i~~~ 96 (109)
++|.+.+++.
T Consensus 122 G~i~l~i~~~ 131 (133)
T 2ep6_A 122 GVIYLEMDLI 131 (133)
T ss_dssp SEEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 8999988764
No 8
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.55 E-value=4.7e-14 Score=94.68 Aligned_cols=82 Identities=30% Similarity=0.391 Sum_probs=66.8
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc---------eEEEee
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY---------RHISLR 77 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---------r~v~L~ 77 (109)
.++||+++++ ++||+|||+ |.|. +..+ ...|+|+|||+| +++||++.+++..+..+. ++++|.
T Consensus 58 ~~~kT~v~~~-t~nP~wne~-f~f~-v~~~-~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~ 133 (153)
T 3b7y_A 58 TSVQTKTIKK-SLNPKWNEE-ILFR-VHPQ-QHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLH 133 (153)
T ss_dssp EEEECCCCSS-CSSCCCCEE-EEEE-ECTT-TCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECB
T ss_pred eeeeCccccC-CCCCCCCCE-EEEE-ecCC-CCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccc
Confidence 4579998875 799999998 9998 8644 478999999998 789999999999987553 788998
Q ss_pred cCCCCCCCCCEEEEEEEEE
Q psy16205 78 TEANFPMSLPMLFCNIELK 96 (109)
Q Consensus 78 d~~g~~~~~~~l~v~i~~~ 96 (109)
...++.-..++|.+.+++.
T Consensus 134 ~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 134 PRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CSSTTCCCCSEEEEEEEEC
T ss_pred cccCCCCcceEEEEEEEEe
Confidence 7665545578888888763
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.52 E-value=1.8e-13 Score=91.31 Aligned_cols=82 Identities=23% Similarity=0.343 Sum_probs=67.5
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC---------------CCeeEEEEEeCCccCCcc-eEE
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN---------------GKLLGQRILPLDGLQAGY-RHI 74 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d---------------~~~iG~~~lpl~~l~~G~-r~v 74 (109)
.++||+++++ ++||+|||+ |.|. +..++ ..|.|+|||+| +++||++.+|+..+..+. +++
T Consensus 49 ~~~kT~~~~~-t~nP~Wne~-f~f~-v~~~~-~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~ 124 (148)
T 3kwu_A 49 TKKRTKTIYG-NLNPVWEEN-FHFE-CHNSS-DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWY 124 (148)
T ss_dssp EEEECCCCCS-CSSCEEEEE-EEEE-ECSTT-CEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEE
T ss_pred EEEECCccCC-CCCCCcccE-EEEE-ecCCC-CEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEE
Confidence 3579998875 699999998 9998 86655 68999999986 579999999999997665 579
Q ss_pred EeecCCCCCCCCCEEEEEEEEE
Q psy16205 75 SLRTEANFPMSLPMLFCNIELK 96 (109)
Q Consensus 75 ~L~d~~g~~~~~~~l~v~i~~~ 96 (109)
+|....++....+.|.+.++++
T Consensus 125 ~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 125 NLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp ECBCSSTTCCCCCEEEEEEEEE
T ss_pred EcccCCCCCCCceEEEEEEEEE
Confidence 9987666555678999998875
No 10
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.51 E-value=3.1e-14 Score=93.74 Aligned_cols=85 Identities=18% Similarity=0.365 Sum_probs=67.7
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCcc-CCc---ceEEEeecCCCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGL-QAG---YRHISLRTEANFP 83 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l-~~G---~r~v~L~d~~g~~ 83 (109)
++||++++++++||+|||+ |.|. +.. ....|+|+|||+| +++||++.+++..+ ..| .++++|. ..++
T Consensus 43 ~~kT~~~~~~~~nP~Wne~-f~f~-v~~-~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~- 117 (136)
T 1wfj_A 43 DQKSNVAEGMGTTPEWNET-FIFT-VSE-GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE- 117 (136)
T ss_dssp EEECCCCTTCCSSCEEEEE-EEEE-EES-SCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE-
T ss_pred cceeEeccCCCCCCccCcE-EEEE-ECC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc-
Confidence 5799998767899999998 9998 875 5678999999998 78999999999998 555 3578887 3332
Q ss_pred CCCCEEEEEEEEEEccCCC
Q psy16205 84 MSLPMLFCNIELKIYVPDG 102 (109)
Q Consensus 84 ~~~~~l~v~i~~~~~~~~~ 102 (109)
..+.|.+.+++.+.-+++
T Consensus 118 -~~G~i~l~l~~~p~~~~~ 135 (136)
T 1wfj_A 118 -YKGEIWVALSFKPSGPSS 135 (136)
T ss_dssp -EEEEEEEEEEEEECCSCC
T ss_pred -cCEEEEEEEEEEeCCCCC
Confidence 357888888887655543
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.51 E-value=1.3e-13 Score=90.54 Aligned_cols=80 Identities=18% Similarity=0.287 Sum_probs=64.3
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC-------CCeeEEEEEeCCcc----CCcceEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN-------GKLLGQRILPLDGL----QAGYRHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d-------~~~iG~~~lpl~~l----~~G~r~v~L~d~ 79 (109)
.++||++++ +++||+|||+ |.|. +..++ .|.|+|||+| +++||++.+|+..+ ..|+++++|...
T Consensus 39 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~--~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~ 113 (132)
T 3pyc_A 39 QCHSTDTVK-NTLDPKWNQH-YDLY-VGKTD--SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL 113 (132)
T ss_dssp CEEECCCCS-SCSSCEEEEE-EEEE-EETTC--CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS
T ss_pred ceEECCccC-CCCCCCccCE-EEEE-eCCCC--EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeec
Confidence 457999885 5799999997 9998 86654 3999999987 38999999999988 788999999876
Q ss_pred CC--CCCCCCEEEEEEEE
Q psy16205 80 AN--FPMSLPMLFCNIEL 95 (109)
Q Consensus 80 ~g--~~~~~~~l~v~i~~ 95 (109)
.+ ..-..+.|.+.++.
T Consensus 114 ~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 114 NPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp STTCCCCCCSEEEEEEEE
T ss_pred CCCCCCceeEEEEEEEEc
Confidence 43 22236788888764
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.50 E-value=3.2e-13 Score=92.88 Aligned_cols=83 Identities=30% Similarity=0.431 Sum_probs=68.1
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc---------eEEEee
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY---------RHISLR 77 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---------r~v~L~ 77 (109)
.++||++++ +++||+|||+ |.|. +. +....|.|.|||+| +++||++.++|..+..+. ++++|.
T Consensus 46 ~~~kT~v~~-~t~nP~Wne~-f~f~-v~-~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~ 121 (176)
T 3m7f_B 46 TSVQTKTIK-KSLNPKWNEE-ILFR-VL-PQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLH 121 (176)
T ss_dssp EEEECCCCS-SCSSCEEEEE-EEEE-EC-TTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECB
T ss_pred cceeCceEC-CCCCCcccce-EEEE-Ec-CCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcc
Confidence 357999887 5899999998 9998 86 44478999999997 789999999999987652 688998
Q ss_pred cCCCCCCCCCEEEEEEEEEE
Q psy16205 78 TEANFPMSLPMLFCNIELKI 97 (109)
Q Consensus 78 d~~g~~~~~~~l~v~i~~~~ 97 (109)
...++....+.|.+.+.+..
T Consensus 122 ~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 122 PRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp CSSTTCCCCSEEEEEEEECC
T ss_pred ccCCCCccCEEEEEEEEEEe
Confidence 86666556789999998754
No 13
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.49 E-value=5.6e-14 Score=95.41 Aligned_cols=87 Identities=20% Similarity=0.272 Sum_probs=71.5
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCC--CcEEEEEEEeCC----CCeeEEEEEeCCccCCcce---EEEeecCCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPD--LAVLRFGVYDEN----GKLLGQRILPLDGLQAGYR---HISLRTEAN 81 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~--l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r---~v~L~d~~g 81 (109)
.++||+++.+++.||+|||. |.|+ +..+. ..+|.|+|+|.+ +.+||++.+||..+..+-+ ..+|.|.++
T Consensus 48 ~k~kTkvi~~~~~npvfnE~-F~wp-l~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~ 125 (144)
T 3l9b_A 48 QSFYSRVLENCEDVADFDET-FRWP-VASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNN 125 (144)
T ss_dssp EEEECCCEEEECSCEEEEEE-EEEE-ESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTS
T ss_pred cceeeEEeccCCCCceEcce-EEec-CCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCC
Confidence 46799999866899999998 9998 87663 369999999998 8999999999999876653 579999999
Q ss_pred CCCCCCEEEEEEEEEEccCCC
Q psy16205 82 FPMSLPMLFCNIELKIYVPDG 102 (109)
Q Consensus 82 ~~~~~~~l~v~i~~~~~~~~~ 102 (109)
+++. ++|.+.+.+. .|+|
T Consensus 126 ~~~~-a~I~l~l~Y~--pp~g 143 (144)
T 3l9b_A 126 AIIK-TSLSMEVRYQ--AADG 143 (144)
T ss_dssp CEEE-EEEEEEEEEE--ETTC
T ss_pred Cccc-cEEEEEEEec--CCCC
Confidence 9866 6666666665 4654
No 14
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.44 E-value=4.5e-13 Score=89.00 Aligned_cols=68 Identities=22% Similarity=0.276 Sum_probs=55.2
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeecCCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRTEAN 81 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d~~g 81 (109)
.++||++++ +++||+|||+ |.|. +...++ ..|+|+|||+| +++||++.++|..+..+- .|.+|.....
T Consensus 59 ~~~kT~v~~-~tlnP~wnE~-f~f~-v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 59 VEAQTALKK-RQLHTTWEEG-LVLP-LAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp EEEECCCCC-CCSSEECSSC-EEEE-CCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred ccEecccCc-CCCCCcCCce-EEEE-ecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 357899886 5799999998 9998 876654 58999999998 889999999999996442 5777776443
No 15
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.42 E-value=2.8e-13 Score=93.87 Aligned_cols=85 Identities=16% Similarity=0.200 Sum_probs=65.7
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc--------eEEEeec
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY--------RHISLRT 78 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~--------r~v~L~d 78 (109)
.++||++++ +++||+|||+ |.|. +. +...|.|+|||+| +++||++.+++..+..++ .+++|..
T Consensus 68 ~~~kT~v~~-~tlnP~Wne~-f~f~-v~--~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~ 142 (173)
T 2nq3_A 68 QSKKTEKCN-NTNSPKWKQP-LTVI-VT--PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGG 142 (173)
T ss_dssp EEEECCCCS-SCSSCEEEEE-EEEE-EC--TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEE
T ss_pred EEeEccccC-CCCCCeECCE-EEEE-eC--CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECcc
Confidence 357999887 5799999998 9997 73 4688999999998 779999999999986543 3788888
Q ss_pred CCCCCCCCCEEEEEEEEEEccC
Q psy16205 79 EANFPMSLPMLFCNIELKIYVP 100 (109)
Q Consensus 79 ~~g~~~~~~~l~v~i~~~~~~~ 100 (109)
..+.....+.|.+.+++-..-|
T Consensus 143 ~~~~~~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 143 DKEPTETIGDLSICLDGLQLES 164 (173)
T ss_dssp SSCTTSEEEEEEEEEESEECC-
T ss_pred CCCCCcccEEEEEEEeeeecch
Confidence 7544334677888887654433
No 16
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.40 E-value=4.2e-13 Score=92.10 Aligned_cols=72 Identities=24% Similarity=0.265 Sum_probs=58.2
Q ss_pred EeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCc-------ceEEEeecCCC
Q psy16205 13 FRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAG-------YRHISLRTEAN 81 (109)
Q Consensus 13 ~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G-------~r~v~L~d~~g 81 (109)
.||++++ +++||+|||+ |.|. +.. ...|.|+|||+| +++||++.+|+..+..+ -.|++|..
T Consensus 74 ~kT~v~~-ktlnP~WNE~-F~f~-v~~--~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--- 145 (157)
T 2fk9_A 74 GQTSTKQ-KTNKPTYNEE-FCAN-VTD--GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--- 145 (157)
T ss_dssp EECCCCS-SCSSCEEEEE-EEEE-EEE--ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS---
T ss_pred EEeeecC-CCCCCccCcE-EEEE-cCC--CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC---
Confidence 5898775 5799999998 9998 854 368999999987 78999999999998755 25778743
Q ss_pred CCCCCCEEEEEEEEE
Q psy16205 82 FPMSLPMLFCNIELK 96 (109)
Q Consensus 82 ~~~~~~~l~v~i~~~ 96 (109)
.+.|+++++++
T Consensus 146 ----~G~i~l~l~~~ 156 (157)
T 2fk9_A 146 ----EGKVFVVITLT 156 (157)
T ss_dssp ----SCEEEEEEEEC
T ss_pred ----CcEEEEEEEEE
Confidence 47788888763
No 17
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.38 E-value=7.5e-13 Score=87.59 Aligned_cols=66 Identities=20% Similarity=0.335 Sum_probs=52.5
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecC--CCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeec
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLP--DLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRT 78 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~--~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d 78 (109)
.++||++++ +++||+|||+ |.|..+... ....|.|+|||+| +++||++.+|+..+..|. +|.+|.+
T Consensus 56 ~~~kT~v~~-~t~nP~wnE~-f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 56 SKRKTKISR-KTRNPTFNEM-LVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CCEECCCCC-SCSSCEEEEE-EEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred ceecCCcCc-CCCCCCCccE-EEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 457999887 5799999998 998524332 3468999999998 789999999999998876 4566654
No 18
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.38 E-value=1.8e-12 Score=85.65 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=57.4
Q ss_pred EeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCc-c----eEEEeecCCCCC
Q psy16205 13 FRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAG-Y----RHISLRTEANFP 83 (109)
Q Consensus 13 ~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G-~----r~v~L~d~~g~~ 83 (109)
.||++++ +++||+|||+ |.|. +..+ ..|.|+|||+| +++||++.+|+..+..+ . .|++|.
T Consensus 52 ~~T~~~~-~t~nP~WnE~-f~f~-v~~~--~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~------ 120 (136)
T 1gmi_A 52 GQTATKQ-KTNSPAWHDE-FVTD-VCNG--RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE------ 120 (136)
T ss_dssp EECCCCS-SCSSCEEEEE-EEEE-EEEE--CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB------
T ss_pred eeeeEEC-CCcCCccCCE-EEEE-ecCC--CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC------
Confidence 5788765 5799999998 9998 8655 78999999998 78999999999998763 2 345543
Q ss_pred CCCCEEEEEEEEEE
Q psy16205 84 MSLPMLFCNIELKI 97 (109)
Q Consensus 84 ~~~~~l~v~i~~~~ 97 (109)
+.+.|++.+++..
T Consensus 121 -~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 121 -PEGKVYVIIDLSG 133 (136)
T ss_dssp -SSCEEEEEEEEEE
T ss_pred -CCeEEEEEEEEEe
Confidence 2467888887753
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.38 E-value=4e-13 Score=90.36 Aligned_cols=65 Identities=31% Similarity=0.578 Sum_probs=54.0
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCC--CcEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeec
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPD--LAVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRT 78 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~--l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d 78 (109)
.++||+++++ ++||+|||+ |.|. +..++ ...|+|+|||+| +++||++.+++..+..|. +|.+|.+
T Consensus 77 ~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 77 KKFETKVHRK-TLNPVFNEQ-FTFK-VPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SCEECCCCTT-CSSCEEEEE-EEEC-CCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ceEeccccCC-CCCCcCccc-EEEe-ecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 3578998875 799999998 9998 86553 378999999998 789999999999998886 4667665
No 20
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.38 E-value=2.4e-12 Score=85.38 Aligned_cols=53 Identities=19% Similarity=0.476 Sum_probs=45.1
Q ss_pred EeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC---CCeeEEEEEeCCccC
Q psy16205 13 FRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN---GKLLGQRILPLDGLQ 68 (109)
Q Consensus 13 ~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d---~~~iG~~~lpl~~l~ 68 (109)
.||++++++++||+|||+ |.|. +..++ ..|.|+|||+| +++||++.+||..+.
T Consensus 34 ~kt~~~~~~t~nP~WnE~-f~f~-v~~~~-~~L~~~V~D~d~~~dd~iG~~~i~l~~l~ 89 (131)
T 2cjt_A 34 VKSTTIAVRGSQPSWEQD-FMFE-INRLD-LGLTVEVWNKGLIWDTMVGTVWIPLRTIR 89 (131)
T ss_dssp EEEECCCEESSSCEEEEE-EEEE-ECCCS-SEEEEEEEECCSSCEEEEEEEEEEGGGSC
T ss_pred EEEeEecCCCCCceECCE-EEEE-EeCCC-CeEEEEEEECCCCCCCeEEEEEEEHHHhh
Confidence 467777667899999998 9998 87544 46999999998 789999999999884
No 21
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.36 E-value=6.7e-13 Score=88.09 Aligned_cols=63 Identities=32% Similarity=0.604 Sum_probs=52.6
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcce---EEEee
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGYR---HISLR 77 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r---~v~L~ 77 (109)
++||+++++ ++||+|||+ |.|. +..+++ ..|+|+|||+| +++||++.++|..+..|.. |++|.
T Consensus 70 ~~kT~v~~~-t~nP~wne~-f~f~-v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 70 KFETKVHRK-TLNPVFNEQ-FTFK-VPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CEECCCCCS-CSSCEEEEE-EEEC-CCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred cEECccCcC-CCCCcCcCe-EEEe-ecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 578998865 799999998 9998 865544 78999999998 7899999999999998853 55654
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.35 E-value=5.7e-13 Score=89.12 Aligned_cols=69 Identities=19% Similarity=0.390 Sum_probs=55.6
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeecCCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRTEAN 81 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d~~g 81 (109)
.++||++++ +++||+|||+ |.|. +...++ ..|+|+|||+| +++||++.+||..+..+. +|++|..+.+
T Consensus 61 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 61 GKRKTSIKR-DTVNPLYDET-LRYE-IPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp GEEECCCCS-SCSSCEEEEE-EEEE-CCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred CccccccCC-CCCCCcEeeE-EEEE-eChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 467999886 5799999998 9998 876654 47999999998 789999999999987664 5788887665
Q ss_pred C
Q psy16205 82 F 82 (109)
Q Consensus 82 ~ 82 (109)
.
T Consensus 138 ~ 138 (148)
T 3fdw_A 138 A 138 (148)
T ss_dssp -
T ss_pred c
Confidence 4
No 23
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.33 E-value=1.4e-13 Score=90.36 Aligned_cols=70 Identities=20% Similarity=0.354 Sum_probs=57.4
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcce-EEEeecCCCCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGYR-HISLRTEANFP 83 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r-~v~L~d~~g~~ 83 (109)
.++||+++++ ++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.+++.++..|++ |.+|.+..+++
T Consensus 53 ~~~kT~~~~~-t~nP~wne~-f~f~-v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~ 129 (138)
T 3n5a_A 53 EKKKTVTKKR-NLNPIFNES-FAFD-IPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQP 129 (138)
T ss_dssp EEEECCCCSS-CSSCEEEEE-EEEE-CCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCC
T ss_pred ceEeCccccC-CCCCcCcce-EEEE-CChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCe
Confidence 3578998865 699999998 9998 876665 68999999998 7899999999999887775 46676666654
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.4e-12 Score=86.50 Aligned_cols=69 Identities=25% Similarity=0.429 Sum_probs=54.2
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC------CCeeEEEEEeCCccCCcc---eEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN------GKLLGQRILPLDGLQAGY---RHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d------~~~iG~~~lpl~~l~~G~---r~v~L~d~ 79 (109)
.++||++++ +++||+|||+ |.|. +...++ ..|.|+|||+| +++||++.+++..+..+. +|.+|.+.
T Consensus 60 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 60 GRRKTHVSK-KTLNPVFDQS-FDFS-VSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp SCEECCCCC-SCSSCEEEEE-EEEC-CCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CcccCCccC-CCCCCCcCce-EEEE-ecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 457999887 5799999998 9998 865444 48999999987 259999999999987643 46777776
Q ss_pred CCC
Q psy16205 80 ANF 82 (109)
Q Consensus 80 ~g~ 82 (109)
.++
T Consensus 137 ~~~ 139 (142)
T 2dmg_A 137 SGP 139 (142)
T ss_dssp CSC
T ss_pred CCC
Confidence 543
No 25
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.31 E-value=3.9e-13 Score=90.25 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=55.8
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcce-EEEeecCCCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGYR-HISLRTEANFP 83 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r-~v~L~d~~g~~ 83 (109)
++||+++++ ++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.+++.....|++ |.+|.+..+++
T Consensus 68 ~~kT~v~~~-t~nP~wne~-f~f~-v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~ 143 (153)
T 1w15_A 68 KKKTHVKKC-TPNAVFNEL-FVFD-IPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQ 143 (153)
T ss_dssp EEECCCCCS-CSSEEEEEE-EEEE-CCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCC
T ss_pred eEecCcccC-CCCCeecce-EEEE-CCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCe
Confidence 579998875 799999998 9998 877665 68999999987 7899999999999777764 45666654443
No 26
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.30 E-value=4.2e-13 Score=91.42 Aligned_cols=70 Identities=21% Similarity=0.372 Sum_probs=55.3
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcce-EEEeecCCCCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGYR-HISLRTEANFP 83 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r-~v~L~d~~g~~ 83 (109)
.++||++++ +++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.+++..+..+.+ |.+|.+..+++
T Consensus 74 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~ 150 (166)
T 2cm5_A 74 AKHKTQIKK-KTLNPEFNEE-FFYD-IKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK 150 (166)
T ss_dssp CEEECCCCC-SCSSCEEEEE-EEEE-CCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCC
T ss_pred ceEeCCccc-CCCCCcccce-EEEE-cchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCc
Confidence 467999886 5799999998 9998 866554 48999999998 7899999999999866653 45565554443
No 27
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.30 E-value=2e-12 Score=88.05 Aligned_cols=63 Identities=30% Similarity=0.391 Sum_probs=51.0
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCC-cc---eEEEee
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQA-GY---RHISLR 77 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~-G~---r~v~L~ 77 (109)
++||+++++ ++||+|||+ |.|. |...++ ..|+|+|||+| +++||++.+++..+.. +. +|.+|.
T Consensus 82 ~~kT~v~~~-tlnP~wnE~-F~f~-v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 82 LFRTRPLDA-SDTLVFNEV-FWVS-MSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEECCCEEC-CSSEEEEEE-EEEE-CCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred ceeCCcCCC-CCCCccccE-EEEE-cCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 689999875 699999998 9998 865543 58999999998 7899999999999853 32 455553
No 28
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.30 E-value=3.1e-12 Score=85.61 Aligned_cols=66 Identities=23% Similarity=0.362 Sum_probs=54.7
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC-cEEEEEEEeCC----CCeeEEEEEeCCccCCcc--eEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL-AVLRFGVYDEN----GKLLGQRILPLDGLQAGY--RHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l-~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~--r~v~L~d~ 79 (109)
.++||+++++ ++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.+++..+..+. +|++|.+.
T Consensus 68 ~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 140 (149)
T 1a25_A 68 SKQKTKTIKC-SLNPEWNET-FRFQ-LKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 140 (149)
T ss_dssp SCEECCCCSS-CSSCEEEEE-EEEE-CCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred ceEecceeCC-CCCCcCCcE-EEEE-eccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence 4579998875 799999998 9998 865544 58999999997 789999999999988764 46888763
No 29
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.29 E-value=2.4e-12 Score=84.48 Aligned_cols=66 Identities=23% Similarity=0.327 Sum_probs=54.0
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC-cEEEEEEEeCC----CCeeEEEEEeCCccCCcc--eEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL-AVLRFGVYDEN----GKLLGQRILPLDGLQAGY--RHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l-~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~--r~v~L~d~ 79 (109)
.++||+++++ ++||+|||+ |.|. +..++. ..|.|+|||+| +++||++.++++.+..+- +|.+|.+.
T Consensus 53 ~~~kT~~~~~-t~nP~wne~-f~f~-~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 125 (137)
T 3rdl_A 53 SKQKTKTIRS-TLNPQWNES-FTFK-LKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPASGWYKLLNQ 125 (137)
T ss_dssp CCEECCCCCS-CSSCEEEEE-EEEE-CCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSCEEEEEECBCH
T ss_pred eeecCceEcC-CCCCCcccE-EEEE-cCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCccCceEECcCc
Confidence 4579998875 699999998 9998 865544 48999999987 789999999999986443 57888763
No 30
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=3.8e-12 Score=84.36 Aligned_cols=67 Identities=24% Similarity=0.370 Sum_probs=53.5
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecC---CCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeecCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLP---DLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRTEA 80 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~---~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d~~ 80 (109)
.++||++++ +++||+|||+ |.|. +..+ ....|+|+|||+| +++||++.+++..+..|. +|++|....
T Consensus 61 ~~~kT~v~~-~t~nP~wne~-f~f~-~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 61 HKLETKVKR-KNLNPHWNET-FLFE-GFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SEEECCCCT-TCSSCCCCEE-EEEC-SCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred ccEeCceEc-CCCCCccccE-EEEC-ccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 357999886 5799999998 9997 5322 2468999999998 789999999999998876 466776543
No 31
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.28 E-value=6.7e-12 Score=82.87 Aligned_cols=59 Identities=22% Similarity=0.563 Sum_probs=49.0
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcc
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGY 71 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~ 71 (109)
.++||++++ +++||+|||+ |.|..+...++ ..|.|+|||+| +++||++.++|..+..+.
T Consensus 58 ~~~kT~v~~-~t~nP~wne~-f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~ 122 (138)
T 1ugk_A 58 HKVKTRVLR-KTLDPAFDET-FTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSE 122 (138)
T ss_dssp SEEECCCCS-SCSSCEEEEE-EEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTT
T ss_pred ceEecCcCc-CCCCCcEeeE-EEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCC
Confidence 467999887 5799999998 99942555544 58999999987 789999999999998764
No 32
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.28 E-value=2.5e-11 Score=88.32 Aligned_cols=81 Identities=26% Similarity=0.484 Sum_probs=62.5
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeecCCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRTEANF 82 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d~~g~ 82 (109)
++||+++++ ++||+|||+ |.|. +..+++ ..|+|+|||.| +++||++.+++..+..|. .+.+|.+..+.
T Consensus 55 ~~~T~~~~~-~~nP~wne~-f~f~-v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~ 131 (284)
T 2r83_A 55 KFETKVHRK-TLNPVFNEQ-FTFK-VPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKE 131 (284)
T ss_dssp CEECCCCCS-CSSCEEEEE-EEEC-CCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSC
T ss_pred eEeCCcccC-CCCCeeCce-EEEE-echHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccc
Confidence 578998875 699999998 9998 876554 68999999998 889999999999998775 46888875442
Q ss_pred -CCCCCEEEEEEEE
Q psy16205 83 -PMSLPMLFCNIEL 95 (109)
Q Consensus 83 -~~~~~~l~v~i~~ 95 (109)
....+.|.+.+.+
T Consensus 132 ~~~~~G~i~l~l~~ 145 (284)
T 2r83_A 132 EQEKLGDICFSLRY 145 (284)
T ss_dssp CCCCCCEEEEEEEE
T ss_pred cccccccEEEEEEe
Confidence 2234556555543
No 33
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.27 E-value=6.1e-12 Score=84.67 Aligned_cols=68 Identities=22% Similarity=0.302 Sum_probs=54.2
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC-cEEEEEEEeCC-----CCeeEEEEEeCCccCC-cc---eEEEeecCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL-AVLRFGVYDEN-----GKLLGQRILPLDGLQA-GY---RHISLRTEA 80 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l-~~l~f~V~d~d-----~~~iG~~~lpl~~l~~-G~---r~v~L~d~~ 80 (109)
.++||++++ +++||+|||+ |.|. +...++ ..|.|+|||.| +++||++.+++..+.. +. .|.+|.+..
T Consensus 63 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 63 RHQKTQTVP-DCRDPAFHEH-FFFP-VQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp TCEECCCCT-TCSSCEEEEE-EEEE-CCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred cEEeccccC-CCCCCccccE-EEEe-cccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 457999887 5799999998 9998 854444 56999999987 5799999999999874 33 578888744
Q ss_pred C
Q psy16205 81 N 81 (109)
Q Consensus 81 g 81 (109)
.
T Consensus 140 ~ 140 (153)
T 3fbk_A 140 L 140 (153)
T ss_dssp G
T ss_pred h
Confidence 3
No 34
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.27 E-value=6.1e-12 Score=86.81 Aligned_cols=53 Identities=19% Similarity=0.462 Sum_probs=45.3
Q ss_pred EeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC---CCeeEEEEEeCCccC
Q psy16205 13 FRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN---GKLLGQRILPLDGLQ 68 (109)
Q Consensus 13 ~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d---~~~iG~~~lpl~~l~ 68 (109)
.||++++++++||+|||+ |.|. +..++ ..|.|+|||+| +++||++.+||..+.
T Consensus 43 ~kt~~~~~~t~nP~WnE~-f~f~-v~~~~-~~L~~~V~D~d~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 43 VESTTIAVRGSQPSWEQD-FMFE-INRLD-LGLTVEVWNKGLIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp EEEECCCEESSSCEEEEE-EEEE-CCCTT-SEEEEEEEECCSSCCEEEEEEEEEGGGSC
T ss_pred eEEEEecCCCCCCCCCCE-EEEE-eeCCC-CEEEEEEEECCCCCCceEEEEEEEHHHhc
Confidence 578777766899999998 9998 86544 46999999998 889999999999884
No 35
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.27 E-value=4.4e-12 Score=84.02 Aligned_cols=59 Identities=31% Similarity=0.548 Sum_probs=48.4
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcc
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGY 71 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~ 71 (109)
.++||++++ +++||+|||+ |.|..+...++ ..|+|+|||+| +++||++.+++..+..|.
T Consensus 66 ~~~kT~v~~-~t~nP~wne~-f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 66 NKLRTKTLR-NTRNPVWNET-LQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp GEEECCCCC-SCSSCEEEEE-EEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred ceeeCCcCC-CCCCCcCcCE-EEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC
Confidence 468999887 5799999998 99862333332 68999999998 689999999999998776
No 36
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.27 E-value=5.6e-12 Score=86.55 Aligned_cols=66 Identities=23% Similarity=0.370 Sum_probs=54.4
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEE-eCC----CCeeEEEEEeCCccCCcc---eEEEeecCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVY-DEN----GKLLGQRILPLDGLQAGY---RHISLRTEAN 81 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~-d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d~~g 81 (109)
++||+++++ ++||+|||+ |.|. +. ++...|.|+|| |+| +++||++.+++..+..+. +|.+|.....
T Consensus 69 ~~kT~v~~~-t~nP~wne~-f~f~-v~-~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 142 (171)
T 2q3x_A 69 KKKTRIARK-TLDPLYQQS-LVFD-ES-PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSS 142 (171)
T ss_dssp EEECCCCCS-CSSCEEEEE-EECS-SC-CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGGG
T ss_pred ceeCccCCC-CCCCCCCcE-EEEE-ec-CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCccc
Confidence 578998875 799999998 9998 74 45588999999 987 789999999999998664 5788876543
No 37
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.26 E-value=9.2e-12 Score=82.01 Aligned_cols=69 Identities=20% Similarity=0.398 Sum_probs=53.8
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEec-CCC--cEEEEEEEeCC------CCeeEEEEEeCCccCCcc--eEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVL-PDL--AVLRFGVYDEN------GKLLGQRILPLDGLQAGY--RHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~-~~l--~~l~f~V~d~d------~~~iG~~~lpl~~l~~G~--r~v~L~d~ 79 (109)
.++||+++++ ++||+|||+ |.|. +.. .++ ..|.|+|||+| +++||++.+++..+...- +|++|.+.
T Consensus 58 ~~~kT~~~~~-t~nP~wne~-f~f~-~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~ 134 (141)
T 1v27_A 58 NKRRTKTVKK-TLEPKWNQT-FIYS-PVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTH 134 (141)
T ss_dssp SCCBCCCCSS-CSSCCCCCC-CEEC-SCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCC
T ss_pred cceeCccccC-CCCCccccE-EEEc-cCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECccc
Confidence 4578998875 799999998 9997 532 333 78999999987 479999999999875433 68888875
Q ss_pred CCC
Q psy16205 80 ANF 82 (109)
Q Consensus 80 ~g~ 82 (109)
...
T Consensus 135 ~~g 137 (141)
T 1v27_A 135 DSG 137 (141)
T ss_dssp SSC
T ss_pred ccC
Confidence 543
No 38
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=2.6e-12 Score=85.65 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=51.0
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeec
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRT 78 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d 78 (109)
++||++++ +++||+|||+ |.|. +..+++ ..|+|+|||+| +++||++.++|..+..+. .|.+|..
T Consensus 69 ~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 69 SKQTGVKR-KTQKPVFEER-YTFE-IPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp CEECCCCC-SCSSCCCCBC-CEEC-CCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred ceEeeccc-CCCCCeEeee-EEEE-eChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 57899876 5799999998 9998 865544 48999999997 789999999999987654 2445543
No 39
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.24 E-value=3.1e-12 Score=86.44 Aligned_cols=60 Identities=30% Similarity=0.470 Sum_probs=49.7
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcceE
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGYRH 73 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r~ 73 (109)
.++||++++ +++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.+++.++..|+++
T Consensus 62 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~ 127 (159)
T 1tjx_A 62 KKKKTTIKK-NTLNPYYNES-FSFE-VPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRH 127 (159)
T ss_dssp EEEECCCCC-SCSSCEEEEE-EEEE-CCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHH
T ss_pred ceeeCceec-CCCCCcccce-EEEE-cCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHH
Confidence 357899876 4799999998 9998 876654 57999999997 78999999999987666544
No 40
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.21 E-value=1.6e-12 Score=86.04 Aligned_cols=68 Identities=21% Similarity=0.410 Sum_probs=53.8
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecC--CCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc---eEEEeecCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLP--DLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY---RHISLRTEAN 81 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~--~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~---r~v~L~d~~g 81 (109)
++||+++++ ++||+|||+ |.|..+... ....|.|+|||+| +++||++.+++..+..+. +|.+|.+..+
T Consensus 65 ~~kT~v~~~-t~nP~wne~-f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 65 KRRTKYVQK-SLNPEWNQT-VIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HTTTTTTHH-HHSCEEEEE-EEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred eeeccccCC-CCCCCCCCE-EEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 468998875 799999998 998524322 3468999999987 789999999999987653 7889887653
No 41
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.16 E-value=5.7e-11 Score=77.20 Aligned_cols=64 Identities=20% Similarity=0.403 Sum_probs=48.3
Q ss_pred cceEeeeeecCCCCCCEECccceEEeEEec-C--CCcEEEEEEEeCC------CCeeEEEEEeCCccCCcc--eEEEe
Q psy16205 10 RKEFRTRLCPSNGLNPVYNEEPFLFRKVVL-P--DLAVLRFGVYDEN------GKLLGQRILPLDGLQAGY--RHISL 76 (109)
Q Consensus 10 ~~k~kT~~i~~ng~nPvWne~~f~f~~v~~-~--~l~~l~f~V~d~d------~~~iG~~~lpl~~l~~G~--r~v~L 76 (109)
..++||+++++ ++||+|||+ |.|. +.. . ....|.|+|||+| +++||++.+|+..+...- +|.+|
T Consensus 54 ~~~~kT~v~~~-t~nP~wne~-f~f~-~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 128 (129)
T 2bwq_A 54 KNKRRTKTVKK-TLEPKWNQT-FIYS-PVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 128 (129)
T ss_dssp GGEEECCCCSS-BSSCEEEEE-EEEC-SCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred CcceecccccC-CCCCccccE-EEEc-cCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence 35689998865 799999998 9997 532 2 2368999999987 569999999999875432 45554
No 42
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.16 E-value=6.5e-11 Score=92.38 Aligned_cols=79 Identities=20% Similarity=0.373 Sum_probs=63.8
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcc-------eEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGY-------RHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~-------r~v~L~d~ 79 (109)
.++||+++++ ++||+|||+ |.|. +..+....|+|+|||+| +++||++.+|+..+..|. .+++|.+.
T Consensus 419 ~~~~T~~~~~-t~nP~w~e~-f~f~-~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 419 QSYTTRTIQD-TLNPKWNFN-CQFF-IKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp EEEECCCCSS-CSSCEEEEE-EEEE-ESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred eeccCCccCC-CCCCccCce-EEEE-ecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 3579998875 699999998 9998 87777788999999998 789999999999998764 45676643
Q ss_pred CCCCCCCCEEEEEEEEEE
Q psy16205 80 ANFPMSLPMLFCNIELKI 97 (109)
Q Consensus 80 ~g~~~~~~~l~v~i~~~~ 97 (109)
..+.|.+.+++.-
T Consensus 496 -----~~G~i~l~~~l~l 508 (510)
T 3jzy_A 496 -----PTGEVWVRFDLQL 508 (510)
T ss_dssp -----SSCEEEEEEEEEE
T ss_pred -----CCceEEEEEEEEE
Confidence 3467778877653
No 43
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.11 E-value=1.6e-10 Score=85.10 Aligned_cols=82 Identities=32% Similarity=0.447 Sum_probs=59.6
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEe-CCccC---Cc-ceEEEeecC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILP-LDGLQ---AG-YRHISLRTE 79 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lp-l~~l~---~G-~r~v~L~d~ 79 (109)
.++||++++ +++||+|||+ |.|. +..+++ ..|+|+|||.| +++||++.++ +..+. .+ ..+.+|...
T Consensus 55 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~ 131 (296)
T 1dqv_A 55 KKFQTKVHR-KTLNPIFNET-FQFS-VPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG 131 (296)
T ss_dssp SCEECCCCC-SCSSCEEEEE-EEEE-CCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC
T ss_pred eeEeCCccC-CCCCCcEeeE-EEEE-ecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccc
Confidence 357999886 4799999998 9998 866654 38999999988 8899999996 43332 22 247788776
Q ss_pred CCCCCCCCEEEEEEEE
Q psy16205 80 ANFPMSLPMLFCNIEL 95 (109)
Q Consensus 80 ~g~~~~~~~l~v~i~~ 95 (109)
.+.....+.|.+.+.+
T Consensus 132 ~~~~~~~G~i~vsl~y 147 (296)
T 1dqv_A 132 GSEKADLGELNFSLCY 147 (296)
T ss_dssp SSCCSCCCEEEEEEEE
T ss_pred cccccccceEEEEEEe
Confidence 5554455666665543
No 44
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.06 E-value=1e-10 Score=85.13 Aligned_cols=59 Identities=29% Similarity=0.460 Sum_probs=49.1
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCCcceE
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQAGYRH 73 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r~ 73 (109)
++||++++ +++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.++++++..|+++
T Consensus 188 ~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~ 252 (284)
T 2r83_A 188 KKKTTIKK-NTLNPYYNES-FSFE-VPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRH 252 (284)
T ss_dssp EEECCCCC-SCSSCEEEEE-EEEE-CCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHH
T ss_pred eeccceec-CCCCCEEcee-EEEe-CCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHH
Confidence 56898876 5799999998 9998 877665 47999999998 88999999999987666543
No 45
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.06 E-value=1.2e-09 Score=87.31 Aligned_cols=73 Identities=25% Similarity=0.361 Sum_probs=55.5
Q ss_pred eEeeeeecCCCCCCEECccceEEeEEe-cCCCcEEEEEEEeCC----CCeeEEEEEeCCccCCcceEEEeecCCCCCCCC
Q psy16205 12 EFRTRLCPSNGLNPVYNEEPFLFRKVV-LPDLAVLRFGVYDEN----GKLLGQRILPLDGLQAGYRHISLRTEANFPMSL 86 (109)
Q Consensus 12 k~kT~~i~~ng~nPvWne~~f~f~~v~-~~~l~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~r~v~L~d~~g~~~~~ 86 (109)
++||+++++ ++||+|||+ |.|. +. .+....|+|+|||+| +|+||++.++|. .|....... +..
T Consensus 426 ~~kTkvik~-tlNP~Wne~-f~f~-~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g~~~~~~~------l~~ 493 (540)
T 3nsj_A 426 EFRTGVVWN-NNNPRWTDK-MDFE-NVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SGFHEVTCE------LNH 493 (540)
T ss_dssp EEECCCBCS-CSSCBCCCC-EEEE-EEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SEEEEEEEE------CSS
T ss_pred eeeeeeecC-CCCCCCCeE-EEEE-EecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CCcEEEEEE------cCC
Confidence 589999976 699999998 9997 53 446678999999998 689999999988 465333222 334
Q ss_pred CEEEEEEEEE
Q psy16205 87 PMLFCNIELK 96 (109)
Q Consensus 87 ~~l~v~i~~~ 96 (109)
+.|.+.++.+
T Consensus 494 G~l~~~~~~~ 503 (540)
T 3nsj_A 494 GRVKFSYHAK 503 (540)
T ss_dssp SEEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 6777777664
No 46
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.02 E-value=3e-10 Score=93.83 Aligned_cols=65 Identities=28% Similarity=0.432 Sum_probs=56.2
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCC---CCeeEEEEEeCCccCCcce---EEEeec
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDEN---GKLLGQRILPLDGLQAGYR---HISLRT 78 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d---~~~iG~~~lpl~~l~~G~r---~v~L~d 78 (109)
.++||++++ +++||+|||+ |.|. +..+....|+|+|||+| +++||++.+++..+..|.+ +++|..
T Consensus 56 ~k~kTkvik-~tlNPvWNEt-F~F~-v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 56 SRKRTRHFN-NDINPVWNET-FEFI-LDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CCEECCCCT-TCSSCEEEEE-EEEE-ECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CeEecceEc-CCCCCeeeeE-EEEE-ecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 357999987 4799999998 9998 98777789999999998 8899999999999999974 566654
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.89 E-value=2.5e-10 Score=89.89 Aligned_cols=66 Identities=21% Similarity=0.374 Sum_probs=7.5
Q ss_pred eEeeeeecCC--CCCCEECccceEEeEEecCCCcEEEEEEEeC-------C-CCeeEEEEEeCCccCCcc---eEEEeec
Q psy16205 12 EFRTRLCPSN--GLNPVYNEEPFLFRKVVLPDLAVLRFGVYDE-------N-GKLLGQRILPLDGLQAGY---RHISLRT 78 (109)
Q Consensus 12 k~kT~~i~~n--g~nPvWne~~f~f~~v~~~~l~~l~f~V~d~-------d-~~~iG~~~lpl~~l~~G~---r~v~L~d 78 (109)
+.||++++++ |+||+|||+ |.|. +. +....|.|+|||+ . +++||++.+|+..+..|. .|++|.+
T Consensus 40 ~~kT~v~~kt~~glnP~WnE~-F~f~-~~-~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 40 YARTTSKPRSASGDTVFWGEH-FEFN-NL-PAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -------------------CC-EECC--------------------------------------------CCEECC----
T ss_pred EeeeeEEeCCCCCCCCccccE-EEEe-cC-CCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 3589888653 399999998 9997 64 4468899999994 2 789999999999998775 4778865
Q ss_pred CC
Q psy16205 79 EA 80 (109)
Q Consensus 79 ~~ 80 (109)
..
T Consensus 117 ~~ 118 (483)
T 3bxj_A 117 PT 118 (483)
T ss_dssp --
T ss_pred CC
Confidence 43
No 48
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=98.80 E-value=2.2e-10 Score=84.40 Aligned_cols=56 Identities=27% Similarity=0.411 Sum_probs=47.1
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC--cEEEEEEEeCC----CCeeEEEEEeCCccCC
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL--AVLRFGVYDEN----GKLLGQRILPLDGLQA 69 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l--~~l~f~V~d~d----~~~iG~~~lpl~~l~~ 69 (109)
.++||++++ +++||+|||+ |.|. +..+++ ..|.|+|||+| +++||++.+++.++..
T Consensus 189 ~~~kT~v~~-~t~nP~wne~-f~f~-v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 189 KKRKTSIKK-NTLNPTYNEA-LVFD-VAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp SCEECCCCC-SCSSCEEEEC-CCCC-CCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred cceecceec-CCCCCeECce-EEEE-cCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc
Confidence 457899876 5799999998 9998 876654 47999999998 7899999999998765
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.56 E-value=2.8e-08 Score=80.64 Aligned_cols=65 Identities=25% Similarity=0.370 Sum_probs=51.6
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCCC-cEEEEEEEeCC----CCeeEEEEEeCCccCCcc--eEEEeec
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDL-AVLRFGVYDEN----GKLLGQRILPLDGLQAGY--RHISLRT 78 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~l-~~l~f~V~d~d----~~~iG~~~lpl~~l~~G~--r~v~L~d 78 (109)
.++||+++++ ++||+|||+ |.|. +...+. ..|.|.|||.| +++||++.++++.+..+- .|.+|.+
T Consensus 209 ~k~kT~v~~~-tlnP~wne~-f~f~-~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 209 SKQKTKTIKS-SLNPEWNET-FRFQ-LKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp SCEECCCCSS-CSSCEEEEE-EEEE-CCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred cccccccccc-ccCCCccce-eeee-cccCCccceeeeEEeecccccccccccccccchhhhccCCcccceeecc
Confidence 4579998875 699999998 9998 765544 46999999998 899999999999876543 3566655
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.45 E-value=0.00056 Score=45.13 Aligned_cols=52 Identities=10% Similarity=0.129 Sum_probs=41.3
Q ss_pred eeeeecCCCCCCEECccceEEeEEecCCCcEEEEEEEeCCCCeeEEEEEeCCccCC
Q psy16205 14 RTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDENGKLLGQRILPLDGLQA 69 (109)
Q Consensus 14 kT~~i~~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d~~~iG~~~lpl~~l~~ 69 (109)
||-+-+..++.|+|||+ |.-. | .+-..|.+.|+.+..++++.+++++..|.+
T Consensus 45 ~t~~~K~kT~~P~Wne~-Fd~~-V--~~Gr~l~i~Vfh~a~~fvAn~tV~~edL~~ 96 (126)
T 1yrk_A 45 KTLVQKKPTMYPEWKST-FDAH-I--YEGRVIQIVLMRAAEEPVSEVTVGVSVLAE 96 (126)
T ss_dssp EEEECCSCCBCCCTTCE-EEEE-C--CTTCEEEEEEEEETTEEEEEEEEEHHHHHH
T ss_pred eeecccCCCCCcCccce-EEee-e--eCCEEEEEEEEcCCCCeeeEEEEEHHHHHh
Confidence 44344556899999998 8865 4 466789999997668999999999999873
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.29 E-value=0.00079 Score=45.05 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=48.4
Q ss_pred CCCCCCEECccceEEeEEecCCCcEEEEEEEeCCCCeeEEEEEeCCccCCc------c--eEEEeecCCCCCCCCCEEEE
Q psy16205 20 SNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDENGKLLGQRILPLDGLQAG------Y--RHISLRTEANFPMSLPMLFC 91 (109)
Q Consensus 20 ~ng~nPvWne~~f~f~~v~~~~l~~l~f~V~d~d~~~iG~~~lpl~~l~~G------~--r~v~L~d~~g~~~~~~~l~v 91 (109)
..++.|+|||+ |.-. | .+-..|.+.|+.+..++++.+++++..|.+. . -|+.|. +.+.|++
T Consensus 56 kkT~~P~Wne~-Fd~~-V--~~Gr~l~i~Vfh~a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe-------P~Gkl~v 124 (138)
T 2enj_A 56 KPTMYPPWDST-FDAH-I--NKGRVMQIIVKGKNVDLISETTVELYSLAERCRKNNGKTEIWLELK-------PQGRMLM 124 (138)
T ss_dssp EEEECCCSSSE-EEEC-C--CSSCEEEEEEECSSCSCCEEEEEESHHHHHHHHHTTTCEEEEEECB-------SSCEEEE
T ss_pred CCCCCccccce-Eeee-E--ECCeEEEEEEEcCCCCeeeEEEEEHHHHHhhhccCCCceEEEEecc-------cCcEEEE
Confidence 34789999998 8865 4 4567899999966689999999999998733 2 234432 2466777
Q ss_pred EEEEE
Q psy16205 92 NIELK 96 (109)
Q Consensus 92 ~i~~~ 96 (109)
.+++.
T Consensus 125 ~i~~~ 129 (138)
T 2enj_A 125 NARYF 129 (138)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 77764
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.27 E-value=0.024 Score=40.60 Aligned_cols=65 Identities=17% Similarity=0.273 Sum_probs=43.9
Q ss_pred ceEeeeeecCCCCCCEECccceEEeEEecCC--CcEEEEEEEeCC--------CCeeEEEEEeCC-----ccCCcceEEE
Q psy16205 11 KEFRTRLCPSNGLNPVYNEEPFLFRKVVLPD--LAVLRFGVYDEN--------GKLLGQRILPLD-----GLQAGYRHIS 75 (109)
Q Consensus 11 ~k~kT~~i~~ng~nPvWne~~f~f~~v~~~~--l~~l~f~V~d~d--------~~~iG~~~lpl~-----~l~~G~r~v~ 75 (109)
..++|-+.+.| -+|.|+|+ +... ++... .+.|+|+++--. +.++|-+.+||- .|+.|...++
T Consensus 77 se~~S~V~YHn-k~P~w~Et-IKi~-LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~ 153 (220)
T 3l4c_A 77 SEYKSVIYYQV-KQPRWFET-VKVA-IPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLI 153 (220)
T ss_dssp SCEECCCCTTC-SSCCCCEE-EEEE-ECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEE
T ss_pred eeEEEEEEEcC-CCCCceEe-EEEe-eChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccCCCcEEccCCEEEE
Confidence 45788877764 79999998 8876 75443 378999986422 456777777763 1556655555
Q ss_pred eec
Q psy16205 76 LRT 78 (109)
Q Consensus 76 L~d 78 (109)
++.
T Consensus 154 vyk 156 (220)
T 3l4c_A 154 VYK 156 (220)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 53
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=88.70 E-value=1.8 Score=29.20 Aligned_cols=86 Identities=19% Similarity=0.178 Sum_probs=62.0
Q ss_pred EeeeeecCCCCCCEECccceEEeEEecCCC-------cEEEEEEEeCC---CCeeEEEEEeCCccC--Cc-c-eEEEeec
Q psy16205 13 FRTRLCPSNGLNPVYNEEPFLFRKVVLPDL-------AVLRFGVYDEN---GKLLGQRILPLDGLQ--AG-Y-RHISLRT 78 (109)
Q Consensus 13 ~kT~~i~~ng~nPvWne~~f~f~~v~~~~l-------~~l~f~V~d~d---~~~iG~~~lpl~~l~--~G-~-r~v~L~d 78 (109)
+-|.+++ |.+|.+|-+ -.|. |...++ ..+++.++... -..||.+.++++.+- ++ . -.++|.+
T Consensus 56 q~Tpv~~--G~~p~y~ft-s~Y~-V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g 131 (156)
T 2yrb_A 56 QTTPVVR--GLHPEYNFT-SQYL-VHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIG 131 (156)
T ss_dssp EECCCEE--SSSCCCCEE-EEEE-ECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECB
T ss_pred eeccccc--CCCCCcceE-EEEE-EEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEc
Confidence 4566664 799999987 7776 743332 36777777754 458999999999874 33 1 2579999
Q ss_pred CCCCCCCCCEEEEEEEEEEccCCC
Q psy16205 79 EANFPMSLPMLFCNIELKIYVPDG 102 (109)
Q Consensus 79 ~~g~~~~~~~l~v~i~~~~~~~~~ 102 (109)
..|+.-..++|-..+.++....++
T Consensus 132 ~~g~~~~~G~LeywiRL~~Pi~~s 155 (156)
T 2yrb_A 132 TKGDIPNFGTVEYWFRLRVSGPSS 155 (156)
T ss_dssp SSSCCTTSEEEEEEEEEEECCCCC
T ss_pred CCCCcceEEEEEEEEEEecccCCC
Confidence 888544678988888887666554
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=87.92 E-value=1.4 Score=37.40 Aligned_cols=53 Identities=23% Similarity=0.305 Sum_probs=40.2
Q ss_pred CCCCEECccceEEeEEecC---CCcEEEEEEEeCC----------------CCeeEEEEEeCC----ccCCcceEEEe
Q psy16205 22 GLNPVYNEEPFLFRKVVLP---DLAVLRFGVYDEN----------------GKLLGQRILPLD----GLQAGYRHISL 76 (109)
Q Consensus 22 g~nPvWne~~f~f~~v~~~---~l~~l~f~V~d~d----------------~~~iG~~~lpl~----~l~~G~r~v~L 76 (109)
+-+|.|||. +.|+ +... -.|.|.|+||+.. ...+|++.+|+- .|++|...+.|
T Consensus 262 ~~~~~Wne~-l~f~-i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~l 337 (940)
T 2wxf_A 262 CSEPVWKQR-LEFD-ISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYM 337 (940)
T ss_dssp CSSCEEEEE-EEEE-EEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEEC
T ss_pred CCCcccceE-EEcc-cccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEE
Confidence 457999996 9998 8644 4489999999841 349999999984 47888765554
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=86.71 E-value=1.7 Score=37.57 Aligned_cols=59 Identities=22% Similarity=0.228 Sum_probs=42.1
Q ss_pred eeeeecCCCCCCEECccceEEeEEec---CCCcEEEEEEEeCC--------CCeeEEEEEeCC----ccCCcceEEEe
Q psy16205 14 RTRLCPSNGLNPVYNEEPFLFRKVVL---PDLAVLRFGVYDEN--------GKLLGQRILPLD----GLQAGYRHISL 76 (109)
Q Consensus 14 kT~~i~~ng~nPvWne~~f~f~~v~~---~~l~~l~f~V~d~d--------~~~iG~~~lpl~----~l~~G~r~v~L 76 (109)
+|+.+ .+-+|.|||. ++|+ |.. |-.|.|.|+||+.. ...||++.++|- .|++|...+.|
T Consensus 395 ~T~~~--~~~~~~Wne~-l~f~-i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~l 468 (1091)
T 3hhm_A 395 NTQRV--PCSNPRWNEW-LNYD-IYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNL 468 (1091)
T ss_dssp CCCCC--CTTSCEEEEE-EEEE-EEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEEC
T ss_pred ecccc--CCCCCCCCee-EEec-CccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEe
Confidence 45433 3458899996 9998 854 44589999999854 358999999984 47888765444
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.04 E-value=1.9 Score=36.71 Aligned_cols=53 Identities=21% Similarity=0.204 Sum_probs=38.9
Q ss_pred CCCCEECccceEEeEEecC---CCcEEEEEEEeCC--------------------CCeeEEEEEeCCc----cCCcceEE
Q psy16205 22 GLNPVYNEEPFLFRKVVLP---DLAVLRFGVYDEN--------------------GKLLGQRILPLDG----LQAGYRHI 74 (109)
Q Consensus 22 g~nPvWne~~f~f~~v~~~---~l~~l~f~V~d~d--------------------~~~iG~~~lpl~~----l~~G~r~v 74 (109)
+-+|.|||. ++|+ +... -.|.|.|+||+.. ..+||++.++|-. |++|...+
T Consensus 264 ~~~~~Wne~-l~f~-i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L 341 (961)
T 1e7u_A 264 TEEVLWNVW-LEFS-IKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVL 341 (961)
T ss_dssp CSEEEEEEE-EEEE-EEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTTSBBCCEEEEE
T ss_pred CCCccccee-EEec-cccccCCcccEEEEEEEecccCccccccccccccccccccceeEEEEeeeeecCCCccccCCEEE
Confidence 457999995 9997 8644 4489999999731 3489999999844 77887554
Q ss_pred Ee
Q psy16205 75 SL 76 (109)
Q Consensus 75 ~L 76 (109)
.|
T Consensus 342 ~l 343 (961)
T 1e7u_A 342 HM 343 (961)
T ss_dssp EC
T ss_pred EE
Confidence 44
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=75.65 E-value=2.2 Score=36.86 Aligned_cols=53 Identities=23% Similarity=0.213 Sum_probs=38.0
Q ss_pred CCCCEECccceEEeEEecCCC---cEEEEEEEeCC--------------------------CCeeEEEEEeCCc----cC
Q psy16205 22 GLNPVYNEEPFLFRKVVLPDL---AVLRFGVYDEN--------------------------GKLLGQRILPLDG----LQ 68 (109)
Q Consensus 22 g~nPvWne~~f~f~~v~~~~l---~~l~f~V~d~d--------------------------~~~iG~~~lpl~~----l~ 68 (109)
+-+|.|||. +.|+ +...++ |.|.|+||+.. ...+|++.+|+-. |+
T Consensus 398 ~~~~~Wnew-l~f~-i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~ 475 (1092)
T 2y3a_A 398 KNDHIWNEQ-LEFD-INICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLR 475 (1092)
T ss_dssp SSCCCCCEE-EEEE-EESSSCCTTCEEEEECCCC------------------------------CCEEEEESBCTTCBBC
T ss_pred CCCCcccee-EEeC-CccccCChhcEEEEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCccc
Confidence 467999996 9998 865554 89999999852 2389999999844 77
Q ss_pred CcceEEEe
Q psy16205 69 AGYRHISL 76 (109)
Q Consensus 69 ~G~r~v~L 76 (109)
+|...+.|
T Consensus 476 ~G~~~l~l 483 (1092)
T 2y3a_A 476 SGDVILHS 483 (1092)
T ss_dssp CEEEECCC
T ss_pred CCCeEEEE
Confidence 88765444
No 58
>2iia_A Sensory rhodopsin transducer protein; signaling protein; 1.80A {Anabaena SP} PDB: 2ii9_A 2ii7_A 2ii8_A
Probab=52.29 E-value=42 Score=21.83 Aligned_cols=46 Identities=13% Similarity=0.203 Sum_probs=33.7
Q ss_pred cCCCcEEEEEEEeCCCCeeEEEEEeCCccCCcceEEEeecC-CCCCCCC
Q psy16205 39 LPDLAVLRFGVYDENGKLLGQRILPLDGLQAGYRHISLRTE-ANFPMSL 86 (109)
Q Consensus 39 ~~~l~~l~f~V~d~d~~~iG~~~lpl~~l~~G~r~v~L~d~-~g~~~~~ 86 (109)
..+.|.|.+++|=.|.+.+|-+.+-+.+-| .||+.+.|. .+++++.
T Consensus 46 gd~dA~i~it~yF~DrdPvgpy~v~V~arR--trHlR~ndL~~pe~iP~ 92 (131)
T 2iia_A 46 GDEDAHVEITIYYSDKEPVGPYRLTVPARR--TKHVRFNDLNDPAPIPH 92 (131)
T ss_dssp SSSCEEEEEEEECSSSCCEEEEEEEECTTE--EEEEEGGGCCSSCCCCS
T ss_pred CCCCeEEEEEEEEcCCCCCcceEEEEcCce--EEEEEecCCCCCccCCC
Confidence 346689999999999999998766655433 578888775 5565653
No 59
>4g5a_A Uncharacterized protein; immunoglobulin - like beta-sandwich, structural genomics, JO center for structural genomics, JCSG; 1.69A {Bacteroides thetaiotaomicron}
Probab=51.59 E-value=37 Score=20.40 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=41.5
Q ss_pred ecCCCCCCEEC------cc-ceEEeEEecCCCcEEEEEEEeCC----------CCeeEEEEEeCCccCCcceEEEeecCC
Q psy16205 18 CPSNGLNPVYN------EE-PFLFRKVVLPDLAVLRFGVYDEN----------GKLLGQRILPLDGLQAGYRHISLRTEA 80 (109)
Q Consensus 18 i~~ng~nPvWn------e~-~f~f~~v~~~~l~~l~f~V~d~d----------~~~iG~~~lpl~~l~~G~r~v~L~d~~ 80 (109)
+.+...+|.|= |. .+... . ....|-+.+.|+|-. --..|++++-|..+..|...+.+.+.+
T Consensus 13 ~qrt~vdpewlkvyvddesk~l~ln-f-kd~fa~i~vevkdiekqiv~~siifpv~ageytlyl~d~s~~~~elymy~a~ 90 (99)
T 4g5a_A 13 IQRTPVDPEWLKVYVDDESKRLCLN-F-KDSFAPITVEVKDIEKQIVFQSIIFPVAAGEYTLYLGDLSLGQYELYMYNAS 90 (99)
T ss_dssp GGGSCCCTTSEEEEEETTTTEEEEE-E-SSCCCCEEEEEECTTSCEEEEEEECCCSSEEEEEECTTCCSSEEEEEEECSS
T ss_pred EecccCChHHeEEEEcCccceeEEe-c-ccccccEEEEeeehhheeeeeeEEEEeecceEEEEeCChhcCceEEEEEecc
Confidence 34556889884 32 12221 1 235577889999975 345688899999999888777777765
Q ss_pred C
Q psy16205 81 N 81 (109)
Q Consensus 81 g 81 (109)
-
T Consensus 91 ~ 91 (99)
T 4g5a_A 91 V 91 (99)
T ss_dssp C
T ss_pred e
Confidence 4
No 60
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=31.02 E-value=66 Score=19.12 Aligned_cols=21 Identities=5% Similarity=0.116 Sum_probs=17.0
Q ss_pred EEEeecCCCCCCCCCEEEEEE
Q psy16205 73 HISLRTEANFPMSLPMLFCNI 93 (109)
Q Consensus 73 ~v~L~d~~g~~~~~~~l~v~i 93 (109)
.+...|.+|+|.+.+.+-+++
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~ 24 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKV 24 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEE
T ss_pred EEEEEcCCCCCCCCCEEEEEE
Confidence 467789999999998887764
No 61
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=20.55 E-value=88 Score=18.69 Aligned_cols=8 Identities=0% Similarity=-0.488 Sum_probs=3.7
Q ss_pred EEEEEeCC
Q psy16205 46 RFGVYDEN 53 (109)
Q Consensus 46 ~f~V~d~d 53 (109)
.|.+.+.|
T Consensus 11 ll~l~~~d 18 (94)
T 3l48_A 11 FAILRLAD 18 (94)
T ss_dssp EEEEEETT
T ss_pred EEEEECCC
Confidence 34455544
Done!