RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16205
         (109 letters)



>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 122

 Score =  102 bits (255), Expect = 3e-30
 Identities = 41/96 (42%), Positives = 65/96 (67%)

Query: 1   MYGLPTDTIRKEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDENGKLLGQR 60
           ++GLP D  R+        +N +NPV+ EEPF+F K+++P+LA LR  V +E  K LG R
Sbjct: 26  LFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEGNKFLGHR 85

Query: 61  ILPLDGLQAGYRHISLRTEANFPMSLPMLFCNIELK 96
           I+P++ L +GY H+ L +E+N P+++P LF  +E+K
Sbjct: 86  IIPINALNSGYHHLCLHSESNMPLTMPALFIFLEMK 121


>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1
           (PLC-D1), C-terminal domain {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 131

 Score = 63.6 bits (154), Expect = 5e-15
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 8/100 (8%)

Query: 1   MYGLPTDTIRKEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLAVLRFGVYDENGK----L 56
           ++G+  DT     +T +  +NG NP ++ E F F +V +PDLA++RF V D +       
Sbjct: 35  IHGVGRDT--GSRQTAVITNNGFNPRWDME-FEF-EVTVPDLALVRFMVEDYDSSSKNDF 90

Query: 57  LGQRILPLDGLQAGYRHISLRTEANFPMSLPMLFCNIELK 96
           +GQ  +P + L+ GYRH+ L ++         LF  I ++
Sbjct: 91  IGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISIQ 130


>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 138

 Score = 33.1 bits (75), Expect = 0.002
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 9/79 (11%)

Query: 1   MYGLPTDTIRKEFRTRLCPSNGLNPVYNEEPFLFRKVVLPDLA--VLRFGVYDENG---- 54
           +          + +T +      N V+NE  F+F  +    L    + F V D       
Sbjct: 42  VNLYHAKKRISKKKTHVKKCT-PNAVFNEL-FVF-DIPCESLEEISVEFLVLDSERGSRN 98

Query: 55  KLLGQRILPLDGLQAGYRH 73
           +++G+ +L      +G  H
Sbjct: 99  EVIGRLVLGATAEGSGGGH 117


>d2fg9a1 b.45.1.1 (A:1-157) 5-nitroimidazole resistance protein
           BT3078 {Bacteroides thetaiotaomicron [TaxId: 818]}
          Length = 157

 Score = 24.7 bits (53), Expect = 2.8
 Identities = 9/35 (25%), Positives = 14/35 (40%)

Query: 73  HISLRTEANFPMSLPMLFCNIELKIYVPDGFEGNK 107
            + +      P  +PM F      +Y+  G EG K
Sbjct: 23  FVGITDLEGNPYVVPMNFGYENDTLYLHSGPEGGK 57


>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus
           (Penicillium simplicissimum) [TaxId: 69488]}
          Length = 268

 Score = 23.2 bits (48), Expect = 9.4
 Identities = 12/74 (16%), Positives = 21/74 (28%), Gaps = 13/74 (17%)

Query: 36  KVVLPDLAVLRFGVYDENGKLLGQRILPLDGLQAGYRHISLRTEANFPMSLPMLFCNIEL 95
           +VVL +  +LR G+         + +      Q   +             +  LF     
Sbjct: 196 EVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSK-------------IAHLFPYGFG 242

Query: 96  KIYVPDGFEGNKGI 109
                   + N GI
Sbjct: 243 PYIDGLFSQSNMGI 256


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.147    0.452 

Gapped
Lambda     K      H
   0.267   0.0568    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 426,617
Number of extensions: 18115
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 5
Length of query: 109
Length of database: 2,407,596
Length adjustment: 68
Effective length of query: 41
Effective length of database: 1,473,956
Effective search space: 60432196
Effective search space used: 60432196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.2 bits)