BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16206
(821 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|170068371|ref|XP_001868841.1| glutamate receptor [Culex quinquefasciatus]
gi|167864409|gb|EDS27792.1| glutamate receptor [Culex quinquefasciatus]
Length = 968
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 291/762 (38%), Positives = 430/762 (56%), Gaps = 112/762 (14%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF + E AF A+ R+N K + PI+++V DS T K +C SEG
Sbjct: 101 AIFHEDNYEAEVAFRYAIERVNMHEKHFE----MTPIIKYVSPDDSFKTEKKVCELASEG 156
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH------GVNVYPESH 118
+ AIFGP S+ I+ S+C+ +IPH+ WDP P G+ +N+YPE+
Sbjct: 157 VTAIFGPSSMLTSGIVSSICKTIEIPHIITHWDPE----PLGGIDPELQAMTINLYPEAD 212
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
++S+ + +I D W +FTIIY++ + L+ L+ VL+ +D I T+RQ+ D
Sbjct: 213 VLSRALRDLIVDYSWKSFTIIYDSDEGLMRLKDVLQIHGPNDNPI-------TVRQID-D 264
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
DYRPLLK+I +S ESHI+L+ DK + IL+QAKEV ++ +YQ+YI++ ++AHT
Sbjct: 265 DPDYRPLLKDIASSGESHIILEVHPDKILEILRQAKEVKMLEEYQSYIITS----LDAHT 320
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+DF++ + +NITT+R+++ + I++ ++ W E R V E V+ E+AL D
Sbjct: 321 LDFEELKYSRSNITTLRLMDTKSFDIKNAVHDWEQGEARMKRVFRVSPEHVRTESALYND 380
Query: 299 AVYLFAAALQSLGERKPL-PTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
AV ++A A++ L + + P+ LSC +N W GL I N MK T G+TG I D
Sbjct: 381 AVKIYATAIRELDATEEITPSRLSCGSKNLRQWPFGLRIVNYMKVKTEYGITGPIIFD-D 439
Query: 356 TGRRNSFSLEFVE-YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
GRR F L+ +E + + +K + W+ G+N++R+++++ + E ++N+T V S+
Sbjct: 440 NGRRTHFQLDIIELHQQEGFKKIAIWDPRGGVNYTRSIDEVHLQIVESLQNKTFIVASRI 499
Query: 415 FAKLRVLFQGEPYMM-KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTY 466
G P++ K + GE GYS++LI I+ L F Y+ + + Y
Sbjct: 500 ---------GAPFLTWKEKKEGEYLEGNNRFEGYSLELIDGISKILGFQYRMEIVPDGKY 550
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G+ N T KW+GL+ L +++ADLAICDLTIT ERR AVDFTMPFMTLGISILY KP +
Sbjct: 551 GSYNKATKKWDGLVKYLLDRKADLAICDLTITYERRTAVDFTMPFMTLGISILYAKPVPQ 610
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG--------------------- 565
DLFSFL PLS DVW+YMATAYLGVS+LLF L+R++
Sbjct: 611 PKDLFSFLSPLSLDVWIYMATAYLGVSVLLFVLSRMAPADWENPHPCKQDEVEEVENIWN 670
Query: 566 --------------------------------SRLRYSA----------KNSNVSLYQRM 583
S+++Y A ++SN S YQRM
Sbjct: 671 MLNALWLTMGSIMGQGCDILPNIESAEDLAKQSKIKYGAVLGGSTLSFFRSSNFSTYQRM 730
Query: 584 HSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKG 643
+AMES+RPSVF KSN EG +RV+K +G YAF MEST +EY E+ C+L Q+GGLLDSKG
Sbjct: 731 WAAMESTRPSVFTKSNDEGRDRVLKGRGLYAFLMESTSLEYITERYCELTQIGGLLDSKG 790
Query: 644 YGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYG 685
YGIAMP + + + A L++ +G+ + +K E++G
Sbjct: 791 YGIAMPVNSPY-RTAISGAVLKMQEEGKLHQLKTRWWKEMHG 831
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 74/202 (36%), Gaps = 70/202 (34%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ------VDTFIL 738
GYS++LI I+ L F Y+ + + YG+ N T KW+GL+ L ++ D I
Sbjct: 523 GYSLELIDGISKILGFQYRMEIVPDGKYGSYNKATKKWDGLVKYLLDRKADLAICDLTIT 582
Query: 739 FFIYSILFFIYTFVNEAVS-----------------TRLVAGMWWFFTLIMISSYTANLA 781
+ + + F F+ +S + L +W + M ++Y
Sbjct: 583 YERRTAVDFTMPFMTLGISILYAKPVPQPKDLFSFLSPLSLDVW----IYMATAYLGVSV 638
Query: 782 AFLTNTRMNP-------PIK---------------------------------NVE---D 798
+RM P P K N+E D
Sbjct: 639 LLFVLSRMAPADWENPHPCKQDEVEEVENIWNMLNALWLTMGSIMGQGCDILPNIESAED 698
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK +IKYG V GST +FF+
Sbjct: 699 LAKQSKIKYGAVLGGSTLSFFR 720
>gi|242011433|ref|XP_002426455.1| predicted protein [Pediculus humanus corporis]
gi|212510560|gb|EEB13717.1| predicted protein [Pediculus humanus corporis]
Length = 904
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/570 (43%), Positives = 357/570 (62%), Gaps = 37/570 (6%)
Query: 4 VGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
G+F + E AF+ A+ RIN D L ++ PI++ + + DS K +CN T
Sbjct: 38 AGLFTEEQWEQEIAFKYAIDRINMDPFILSKQRLV-PIIEKIPSGDSFEAGKKVCNLTYS 96
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLIS 121
GIAAIFGP I + I++S+ + +IP+++ W+ P+K + T + YPE ++S
Sbjct: 97 GIAAIFGPNDIASAGIVKSISETLEIPNLQTQWEIAPDKLSLLT-----IKTYPEPKMLS 151
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+GI+ +I DMDW +FTI+YE ++L+ LQ VL+ +D I IRQL P DD
Sbjct: 152 QGIADLIEDMDWKSFTILYENEESLIRLQGVLKLKGPNDSPI-------AIRQLDPQ-DD 203
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
+R +LKEI+ S E+HI+L C ++ +T+L+QAKEV +M DYQ+YI++ ++ HT+DF
Sbjct: 204 HRIILKEIQMSGETHIILQCQPERVLTVLRQAKEVKMMEDYQSYIITD----LDTHTLDF 259
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVY 301
+F+ G NITT+R+I+P + ++++ + W+ E G L+ ETVK+E AL+YDAV
Sbjct: 260 SEFKYGRTNITTIRLIDPEDSNVQNAVRDWVEGEKRNGVYLDTTPETVKVETALLYDAVQ 319
Query: 302 LFAAALQSL--GERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
LFA A+ + ++K TPL C+ +W HG + N M+ + GMTG I + GRR
Sbjct: 320 LFAKAVHVIESPKKKISVTPLRCDGIETWPHGYSLVNYMRLVEGKGMTGPIGFEQSDGRR 379
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
N F LE E + +K +GTW+ +N++RT+ ++ + EK+EN+T V S+
Sbjct: 380 NLFRLEIAELTKNGFKKIGTWDPINKVNYTRTIGEIYSQIVEKLENKTFIVVSRL----- 434
Query: 420 VLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
G P++M G L G YS++LI IA ELNF Y+F L + YG+ N T
Sbjct: 435 ----GAPFLMLKEPQGSLTGNDRFEGYSINLIDEIAKELNFKYEFTLTPDGKYGSYNRVT 490
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
KW+GL+ +L +++ADLAICDLTIT ER +AVDFTMPFMTLGISILY KP K+ P+LFSF
Sbjct: 491 KKWDGLVKQLLDRKADLAICDLTITYERESAVDFTMPFMTLGISILYSKPVKQPPNLFSF 550
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L P S DVW+YM TAYLGVSL LF LAR++
Sbjct: 551 LSPFSLDVWMYMVTAYLGVSLFLFILARMT 580
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
KNSN S YQRM +AMES+RPSVF SN EGVERV+K K YAF MEST IEY+VE+NC+L
Sbjct: 690 KNSNFSTYQRMWAAMESARPSVFTTSNAEGVERVLKGKRSYAFLMESTSIEYQVERNCEL 749
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYG 685
Q+G LLDSKGYGIAMP + + + A L++ G +M+K E+YG
Sbjct: 750 QQIGDLLDSKGYGIAMPVNSPY-RTAISGAVLKMQEDGRLHMLKEKWWKEMYG 801
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 72/119 (60%)
Query: 702 YKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLV 761
+ F+L R + NP N E + + + F + S++ + +A+STR++
Sbjct: 572 FLFILARMTPHEWENPHPCNDNCEELESKFNLVNCLWFSLGSLMGQGCDILPKAISTRII 631
Query: 762 AGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
AGMWWFFTLIMISSYTANLAAFLT RM+ I EDLAK +IKYG V GST FFK
Sbjct: 632 AGMWWFFTLIMISSYTANLAAFLTVERMDVAITGAEDLAKQTKIKYGAVLGGSTAAFFK 690
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 670 GEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
G P++M G L G YS++LI IA ELNF Y+F L + YG+ N T KW+
Sbjct: 435 GAPFLMLKEPQGSLTGNDRFEGYSINLIDEIAKELNFKYEFTLTPDGKYGSYNRVTKKWD 494
Query: 724 GLIGELQEQ 732
GL+ +L ++
Sbjct: 495 GLVKQLLDR 503
>gi|357615315|gb|EHJ69593.1| hypothetical protein KGM_08876 [Danaus plexippus]
Length = 945
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/570 (41%), Positives = 350/570 (61%), Gaps = 34/570 (5%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F P +++ AF AV R+N D LP +L V+ + DS H +K +C+
Sbjct: 33 IRIGGLFHPEDDKQEVAFRYAVERVNADRAVLPRAKLLAQ-VETISPQDSFHASKRVCHL 91
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+AAIFGPQS I+S+C ++PH+E WD + VN+YP +
Sbjct: 92 LRSGVAAIFGPQSAPAAAHIQSICDTMELPHLETRWD----YRTRRESCLVNLYPHPAAL 147
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ ++ W +FTI+YE D LV LQ++L+ AH P V +RQLP D+
Sbjct: 148 SRAYVDLVRAWGWKSFTIVYENSDGLVRLQELLK-AHG------PSELPVAVRQLP-DSY 199
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+ESHI+LDC+ ++ +L+QA+++ +M DY +Y+++ ++ H+VD
Sbjct: 200 DYRPLLKQIKNSAESHIVLDCATERIRDVLQQAQQIGMMSDYHSYLITS----LDLHSVD 255
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
++F+ G NIT +R+++P ++ ++ W+Y+E +GR L + + K E AL+YDAV
Sbjct: 256 LEEFKYGGTNITALRLLDPERAEVQRVVRDWVYDEARKGRKLQLGHTSAKTETALIYDAV 315
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + PLSCE +W HG + N MK + + G+TG I D Q G R
Sbjct: 316 HLFAKALHDLDTSQQIDVRPLSCEAEDTWPHGYSLINYMKIVEMRGLTGVIKFDHQ-GFR 374
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
+ F+L+ +E D + G WN++ G+N++R+ K+ E ++N+TL VT+ A
Sbjct: 375 SDFTLDIIELTRDGLQKAGVWNSSEGVNYTRSYGDNQKQIVEILQNKTLVVTTILSA--- 431
Query: 420 VLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
PY M+ + +L G Y+VDLI I+ L F Y F L + YG+ N +T
Sbjct: 432 ------PYCMRREASEKLTGNAQFEGYAVDLIHEISKILGFNYTFKLAPDGRYGSYNRET 485
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+W+G+I EL EQRAD+AI DLTIT +R VDFTMPFM LGIS+LYRKP K+ P+LFSF
Sbjct: 486 KEWDGMIRELLEQRADVAIADLTITYDREQVVDFTMPFMNLGISVLYRKPIKQPPNLFSF 545
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L PLS DVW+YMATAYLGVS+LLF LAR +
Sbjct: 546 LSPLSLDVWIYMATAYLGVSVLLFILARFT 575
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 64/77 (83%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S MES+RPSVF SNKEG ERV++ KG YA+ MEST IEY VE+NCDL
Sbjct: 729 RDSNFSTYQRMWSFMESARPSVFTSSNKEGEERVMRGKGAYAYLMESTTIEYVVERNCDL 788
Query: 633 MQVGGLLDSKGYGIAMP 649
QVGG+LDSKGYGIAMP
Sbjct: 789 TQVGGMLDSKGYGIAMP 805
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 57/67 (85%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ EDLAK +IKYG ++ G
Sbjct: 663 KAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALKGG 722
Query: 814 STRNFFK 820
ST FF+
Sbjct: 723 STAAFFR 729
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ + +L G Y+VDLI I+ L F Y F L + YG+ N +T +W+G+
Sbjct: 432 PYCMRREASEKLTGNAQFEGYAVDLIHEISKILGFNYTFKLAPDGRYGSYNRETKEWDGM 491
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I + ++ F F+N +S
Sbjct: 492 IRELLEQRADVAIADLTITYDREQVVDFTMPFMNLGIS 529
>gi|195390963|ref|XP_002054136.1| GJ24267 [Drosophila virilis]
gi|194152222|gb|EDW67656.1| GJ24267 [Drosophila virilis]
Length = 858
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/572 (44%), Positives = 350/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 35 IKIGGLFHPSDDHQELAFRQAVERINSDRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 94 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 149
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 150 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 201
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTVD
Sbjct: 202 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVD 257
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 258 LDEFRYGGTNITGFRLIN--EKVVSDVVRQWNIDEKGMLRSANL--TTVRSETALMYDAV 313
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 314 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 372
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 373 TDFMLDIVELTPSGIRKIGTWNSTLSEGINFTRTFSQKQQEIEANLKNKTLVVTT----- 427
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P TG + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 428 ----ILSNPYCMRKESAVPLTGNDQFEGYAVDLIHEISRSLGFNYKIQLVPDGSYGSLNK 483
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+G+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 484 MSGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 543
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 544 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 575
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 721
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 722 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 759
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 602 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 661
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFR 683
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P TG + GY+VDLI I+ L F YK L + +YG+LN +G+WNG+
Sbjct: 432 PYCMRKESAVPLTGNDQFEGYAVDLIHEISRSLGFNYKIQLVPDGSYGSLNKMSGEWNGM 491
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 492 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 529
>gi|195055169|ref|XP_001994492.1| GH17276 [Drosophila grimshawi]
gi|193892255|gb|EDV91121.1| GH17276 [Drosophila grimshawi]
Length = 858
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 352/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 35 IKIGGLFHPSDDHQELAFRQAVERINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 94 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 149
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 150 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 201
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 202 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 257
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
++F+ G NIT R+IN + + ++ W +E RS N+ T++ E ALMYDAV
Sbjct: 258 LEEFRYGGTNITGFRLIN--DKIVTDVVRQWSIDEKGMLRSANL--TTIRSETALMYDAV 313
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 314 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 372
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 373 TDFMLDIVELTPGGIRKIGTWNSTLPEGINFTRTFSQKQQEIEANLKNKTLVVTT----- 427
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P TG + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 428 ----ILSNPYCMRKESAIPLTGNDQFEGYAVDLIHEISRSLGFNYKIQLVPDGSYGSLNK 483
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 484 LTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 543
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 544 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 575
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 721
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 722 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 759
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 602 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 661
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFR 683
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P TG + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 432 PYCMRKESAIPLTGNDQFEGYAVDLIHEISRSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 491
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 492 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 529
>gi|195113113|ref|XP_002001113.1| GI22149 [Drosophila mojavensis]
gi|193917707|gb|EDW16574.1| GI22149 [Drosophila mojavensis]
Length = 859
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 350/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 36 IKIGGLFHPSDDHQELAFRQAVERINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 94
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 95 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 150
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 151 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 202
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 203 DYRPLLKQIKNSAEAHIVLDCSTERVHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 258
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W ++ RS N+ TV+ E ALMYDAV
Sbjct: 259 LDEFRYGGTNITGFRLIN--EKVVSDVVRQWSIDDKGMLRSANL--TTVRSETALMYDAV 314
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 315 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 373
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 374 TDFMLDIVELTPAGIRKIGTWNSTLPEGINFTRTFSQKQQEIEANLKNKTLVVTT----- 428
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P TG + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 429 ----ILSNPYCMRKESAVPLTGNDQFEGYAVDLIHEISRSLGFNYKIQLVPDGSYGSLNK 484
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 485 MTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 544
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 545 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 576
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A + S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 663 LAKQTRIKYGALKGGSTAAFFRESKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 722
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 723 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 760
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 603 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 662
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 663 LAKQTRIKYGALKGGSTAAFFR 684
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P TG + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 433 PYCMRKESAVPLTGNDQFEGYAVDLIHEISRSLGFNYKIQLVPDGSYGSLNKMTGEWNGM 492
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 493 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 530
>gi|194742810|ref|XP_001953893.1| GF17009 [Drosophila ananassae]
gi|190626930|gb|EDV42454.1| GF17009 [Drosophila ananassae]
Length = 853
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/572 (43%), Positives = 351/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 30 IKIGGLFHPSDDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 89 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 145 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 197 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 252
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 253 LDEFRYGGTNITGFRLIN--DKIVSDVVRQWSIDEKGMMRSANL--TTVRSETALMYDAV 308
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 309 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 367
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +G+WN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 368 TDFMLDIVELTPAGIRKIGSWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 422
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 423 ----ILSNPYCMRKESAVPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 478
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 479 MTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 570
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 717 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 754
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFR 678
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 427 PYCMRKESAVPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKMTGEWNGM 486
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 524
>gi|195449615|ref|XP_002072149.1| GK22690 [Drosophila willistoni]
gi|194168234|gb|EDW83135.1| GK22690 [Drosophila willistoni]
Length = 858
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/572 (43%), Positives = 348/572 (60%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 35 IKIGGLFHPSDDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 94 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 149
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 150 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 201
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 202 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 257
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 258 LDEFRYGGTNITGFRLIN--DKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 313
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 314 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 372
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 373 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 427
Query: 418 LRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ L G Y+VDLI I+ L F YK L + +YG+LN
Sbjct: 428 ----ILSNPYCMRKESAVSLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 483
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 484 MTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 543
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 544 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 575
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGV+RV K KG
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVDRVAKGKG 721
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 722 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 759
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 602 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 661
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFR 683
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ L G Y+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 432 PYCMRKESAVSLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKMTGEWNGM 491
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 492 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 529
>gi|198452081|ref|XP_001358619.2| GA17711 [Drosophila pseudoobscura pseudoobscura]
gi|198131779|gb|EAL27760.2| GA17711 [Drosophila pseudoobscura pseudoobscura]
Length = 858
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/572 (43%), Positives = 351/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 35 IKIGGLFHPSDDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 94 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 149
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 150 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 201
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 202 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 257
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 258 LDEFRYGGTNITGFRLIN--DKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 313
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 314 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 372
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 373 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 427
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 428 ----ILSNPYCMRKESAVPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 483
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I +L EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 484 LTGEWNGMIRDLLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 543
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 544 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 575
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGV+RV K KG
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVDRVAKGKG 721
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 722 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 759
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 602 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 661
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFR 683
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 432 PYCMRKESAVPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 491
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I +L EQ D I F + F F+N VS
Sbjct: 492 IRDLLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 529
>gi|194899644|ref|XP_001979369.1| GG15059 [Drosophila erecta]
gi|190651072|gb|EDV48327.1| GG15059 [Drosophila erecta]
Length = 853
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 349/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P ++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 30 IKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 89 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 145 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 197 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 252
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 253 LDEFRYGGTNITGFRLIN--EKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 308
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 309 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 367
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 368 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 422
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 423 ----ILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 478
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 479 LTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 570
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 717 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 754
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFR 678
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 427 PYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 486
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 524
>gi|24648559|ref|NP_650925.1| CG3822 [Drosophila melanogaster]
gi|195353859|ref|XP_002043420.1| GM23151 [Drosophila sechellia]
gi|7300670|gb|AAF55818.1| CG3822 [Drosophila melanogaster]
gi|194127561|gb|EDW49604.1| GM23151 [Drosophila sechellia]
Length = 853
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 349/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P ++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 30 IKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 89 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 145 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 197 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 252
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 253 LDEFRYGGTNITGFRLIN--EKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 308
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 309 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 367
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 368 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 422
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 423 ----ILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 478
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 479 LTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 570
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 717 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 754
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFR 678
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 427 PYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 486
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 524
>gi|195498341|ref|XP_002096480.1| GE25031 [Drosophila yakuba]
gi|194182581|gb|EDW96192.1| GE25031 [Drosophila yakuba]
Length = 853
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 349/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P ++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 30 IKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 89 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 145 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 197 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 252
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 253 LDEFRYGGTNITGFRLIN--EKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 308
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 309 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 367
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 368 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 422
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 423 ----ILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 478
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 479 LTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 570
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 717 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 754
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFR 678
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 427 PYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 486
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 524
>gi|21430570|gb|AAM50963.1| RE06730p [Drosophila melanogaster]
Length = 853
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 349/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P ++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 30 IKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 89 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 145 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 197 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 252
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 253 LDEFRYGGTNITGFRLIN--EKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 308
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 309 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 367
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 368 ADFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 422
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 423 ----ILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 478
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 479 LTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 570
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTVSNGEGVERVAKGKG 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 717 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 754
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFR 678
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 427 PYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 486
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 524
>gi|195145458|ref|XP_002013709.1| GL23254 [Drosophila persimilis]
gi|194102652|gb|EDW24695.1| GL23254 [Drosophila persimilis]
Length = 858
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/572 (43%), Positives = 350/572 (61%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P+++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 35 IKIGGLFHPSDDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 94 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 149
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I+ W TFTIIYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 150 SKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 201
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 202 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 257
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 258 LDEFRYGGTNITGFRLIN--DKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 313
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 314 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 372
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 373 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 427
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F Y L + +YG+LN
Sbjct: 428 ----ILSNPYCMRKESAVPLSGNDQFEGYAVDLIHEISKSLGFNYNIQLVPDGSYGSLNK 483
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I +L EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 484 LTGEWNGMIRDLLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 543
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 544 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 575
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGV+RV K KG
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVDRVAKGKG 721
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 722 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 759
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 602 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 661
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 662 LAKQTRIKYGALKGGSTAAFFR 683
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F Y L + +YG+LN TG+WNG+
Sbjct: 432 PYCMRKESAVPLSGNDQFEGYAVDLIHEISKSLGFNYNIQLVPDGSYGSLNKLTGEWNGM 491
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I +L EQ D I F + F F+N VS
Sbjct: 492 IRDLLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 529
>gi|347964533|ref|XP_003437104.1| AGAP000801-PB [Anopheles gambiae str. PEST]
gi|333467577|gb|EGK96607.1| AGAP000801-PB [Anopheles gambiae str. PEST]
Length = 888
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/566 (42%), Positives = 339/566 (59%), Gaps = 35/566 (6%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F P+++ AF AV +IN D LP +L I + + DS +K +C+ G
Sbjct: 1 GLFHPDDDHQEIAFRYAVEKINSDRTILPRSKLLAQI-ERISPQDSFLASKRVCHLLGVG 59
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP +SK
Sbjct: 60 VAAIFGPQSSHTASHVQSICDTMEIPHLETRWD---YRLRRESCL-VNLYPHPSTLSKAY 115
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
++ W +FTIIYET++ LV +Q++L+ D I T+RQL D+ DYRP
Sbjct: 116 VDLVAAWGWKSFTIIYETNEGLVRMQELLKAHGLSDYPI-------TVRQLS-DSGDYRP 167
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
LLK+IKNS+ESHI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HT++ +F
Sbjct: 168 LLKQIKNSAESHIVLDCSTERIYEVLKQAQQIGMMSDYHSYLITS----LDLHTINLDEF 223
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
+ G NIT R+++P NP + ++ W E G+ ++ + V E ALMYDAV+LFA
Sbjct: 224 KYGGTNITAFRLVDPENPEVAQAIHNWTIGEARLGKKVDFKT-AVSAETALMYDAVHLFA 282
Query: 305 AALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFS 363
AL L + + PLSC+ +W HG + N MK + + G+T I D Q G R+ F
Sbjct: 283 KALHDLDTSQQIDIHPLSCDTQDTWPHGYSLINYMKIVEMRGLTDVIKFDHQ-GFRSDFV 341
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
L+ VE + GTWN+ G+N +RT + KE E ++N+TL VT+ A
Sbjct: 342 LDIVELGPQGLRKSGTWNSTSGVNFTRTYGEQQKEIVEILQNKTLIVTTILSA------- 394
Query: 424 GEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
PY M+ +L G Y++DLI I+ L F Y L + YG+ N +TG+W+
Sbjct: 395 --PYCMRKDSAEKLTGNSQFEGYAIDLIHEISKILGFNYTIRLAPDGRYGSHNKETGEWD 452
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G+I EL EQRADLAI DLTIT +R VDFTMPFM LGIS+LYRKP K+ P+LFSFL PL
Sbjct: 453 GMIKELLEQRADLAIADLTITFDREQVVDFTMPFMNLGISVLYRKPVKQPPNLFSFLSPL 512
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S DVW+YMATAYLGVS+LLF LAR +
Sbjct: 513 SLDVWIYMATAYLGVSVLLFILARFT 538
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S MES+RPSVF SN EGVERVVK KG YAF MEST IEY +E+NC+L
Sbjct: 648 RDSNFSTYQRMWSFMESARPSVFTASNIEGVERVVKGKGSYAFLMESTSIEYVIERNCEL 707
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
QVGG+LDSKGYGIAM P S F S KL+ +G+ +++K
Sbjct: 708 TQVGGMLDSKGYGIAMPPNSPFRTAISGAVLKLQE--EGKLHILKT 751
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
F+L R Y NP L E + + F I S++ +AVSTR+VAG
Sbjct: 532 FILARFTPYEWENPHPCNSEPLFLENSFTLLNSLWFTIGSLMQQGCDIAPKAVSTRMVAG 591
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
MWWFFTLIMISSYTANLAAFLT RM+ PI++ EDLAK +IKYG + GST FF+
Sbjct: 592 MWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALRGGSTAAFFR 648
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ +L G Y++DLI I+ L F Y L + YG+ N +TG+W+G+
Sbjct: 395 PYCMRKDSAEKLTGNSQFEGYAIDLIHEISKILGFNYTIRLAPDGRYGSHNKETGEWDGM 454
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F ++ F F+N +S
Sbjct: 455 IKELLEQRADLAIADLTITFDREQVVDFTMPFMNLGIS 492
>gi|347964535|ref|XP_311341.5| AGAP000801-PA [Anopheles gambiae str. PEST]
gi|333467576|gb|EAA06836.6| AGAP000801-PA [Anopheles gambiae str. PEST]
Length = 888
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/566 (42%), Positives = 339/566 (59%), Gaps = 35/566 (6%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F P+++ AF AV +IN D LP +L I + + DS +K +C+ G
Sbjct: 1 GLFHPDDDHQEIAFRYAVEKINSDRTILPRSKLLAQI-ERISPQDSFLASKRVCHLLGVG 59
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP +SK
Sbjct: 60 VAAIFGPQSSHTASHVQSICDTMEIPHLETRWD---YRLRRESCL-VNLYPHPSTLSKAY 115
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
++ W +FTIIYET++ LV +Q++L+ D I T+RQL D+ DYRP
Sbjct: 116 VDLVAAWGWKSFTIIYETNEGLVRMQELLKAHGLSDYPI-------TVRQLS-DSGDYRP 167
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
LLK+IKNS+ESHI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HT++ +F
Sbjct: 168 LLKQIKNSAESHIVLDCSTERIYEVLKQAQQIGMMSDYHSYLITS----LDLHTINLDEF 223
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
+ G NIT R+++P NP + ++ W E G+ ++ + V E ALMYDAV+LFA
Sbjct: 224 KYGGTNITAFRLVDPENPEVAQAIHNWTIGEARLGKKVDFKT-AVSAETALMYDAVHLFA 282
Query: 305 AALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFS 363
AL L + + PLSC+ +W HG + N MK + + G+T I D Q G R+ F
Sbjct: 283 KALHDLDTSQQIDIHPLSCDTQDTWPHGYSLINYMKIVEMRGLTDVIKFDHQ-GFRSDFV 341
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
L+ VE + GTWN+ G+N +RT + KE E ++N+TL VT+ A
Sbjct: 342 LDIVELGPQGLRKSGTWNSTSGVNFTRTYGEQQKEIVEILQNKTLIVTTILSA------- 394
Query: 424 GEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
PY M+ +L G Y++DLI I+ L F Y L + YG+ N +TG+W+
Sbjct: 395 --PYCMRKDSAEKLTGNSQFEGYAIDLIHEISKILGFNYTIRLAPDGRYGSHNKETGEWD 452
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G+I EL EQRADLAI DLTIT +R VDFTMPFM LGIS+LYRKP K+ P+LFSFL PL
Sbjct: 453 GMIKELLEQRADLAIADLTITFDREQVVDFTMPFMNLGISVLYRKPVKQPPNLFSFLSPL 512
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S DVW+YMATAYLGVS+LLF LAR +
Sbjct: 513 SLDVWIYMATAYLGVSVLLFILARFT 538
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S MES+RPSVF SN EGVERVVK KG YAF MEST IEY +E+NC+L
Sbjct: 648 RDSNFSTYQRMWSFMESARPSVFTASNIEGVERVVKGKGSYAFLMESTSIEYVIERNCEL 707
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
QVGG+LDSKGYGIAM P S F S KL+ +G+ +++K
Sbjct: 708 TQVGGMLDSKGYGIAMPPNSPFRTAISGAVLKLQE--EGKLHILKT 751
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 567 FAIGSLMQQGCDFLPKAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 626
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK +IKYG + GST FF+
Sbjct: 627 LAKQTKIKYGALRGGSTAAFFR 648
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ +L G Y++DLI I+ L F Y L + YG+ N +TG+W+G+
Sbjct: 395 PYCMRKDSAEKLTGNSQFEGYAIDLIHEISKILGFNYTIRLAPDGRYGSHNKETGEWDGM 454
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F ++ F F+N +S
Sbjct: 455 IKELLEQRADLAIADLTITFDREQVVDFTMPFMNLGIS 492
>gi|270001525|gb|EEZ97972.1| hypothetical protein TcasGA2_TC000367 [Tribolium castaneum]
Length = 1743
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/573 (42%), Positives = 349/573 (60%), Gaps = 42/573 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F P +++ AF AV +IN D LP L ++ + DS H +K +C+
Sbjct: 24 IRIGGLFHPADDKQEIAFRYAVEKINSDRMILPRSK-LSAQIEKMSPQDSFHASKKVCHL 82
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP +
Sbjct: 83 LRSGVAAIFGPQSAHTASHVQSICDTMEIPHLETRWD---YRLRRESCL-VNLYPHPTTL 138
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK ++ W +FTIIYE ++ LV LQ++L+ AH P +T+RQL ++
Sbjct: 139 SKAYVDLVKAWGWKSFTIIYENNEGLVRLQELLK-AHG------PYEFPITVRQLG-ESS 190
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+ESHI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ H VD
Sbjct: 191 DYRPLLKQIKNSAESHIVLDCSTERIYDVLKQAQQIGMMSDYHSYLITS----LDLHGVD 246
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE--NERGR-SLNVRAETVKIEAALMY 297
++F+ G NIT R+++P P +R ++ W E N++G S +RAET ALMY
Sbjct: 247 LEEFKYGGTNITAFRLVDPDGPEVRKVVREWNLSEAKNKKGEISSIIRAET-----ALMY 301
Query: 298 DAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
DAV+LFA AL L + + PLSC+ +W HG + N MK + + G+TG I D Q
Sbjct: 302 DAVHLFAKALHDLDTSQQIDIKPLSCDAVDTWPHGYSLINYMKIVEMRGLTGVIKFDHQ- 360
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R+ F L+ +E + K +GTWN+ G+N +RT + + E I+N+T VT+
Sbjct: 361 GFRSDFVLDIIELNKEGLKKIGTWNSTEGVNFTRTYGEAYTQIVEIIQNKTFVVTT---- 416
Query: 417 KLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLN 470
PY+M+ + +L G Y+VDLI I+ L F Y L + YG+LN
Sbjct: 417 -----ILSSPYVMRKEASEKLTGNAQFEGYAVDLIHEISRVLGFNYTIRLAPDGRYGSLN 471
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
+T +W+G+I EL +Q+ADLAI DLTIT +R AVDFTMPFM LGISILYRKP K+ P+L
Sbjct: 472 RETKEWDGMIRELLDQKADLAIADLTITYDREQAVDFTMPFMNLGISILYRKPIKQPPNL 531
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL PLS DVW+YMATAYLGVS+LLF LAR +
Sbjct: 532 FSFLSPLSLDVWIYMATAYLGVSVLLFILARFT 564
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 179/569 (31%), Positives = 293/569 (51%), Gaps = 43/569 (7%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F E+ AF +A IN +K I L P ++NY++ T C +G
Sbjct: 905 GLFQHETEQ--KAFHLATDLINAKYK--DSSIRLIPDSHLIDNYNAYTTYLTTCELLQKG 960
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ AIFGP SI + I+++ +IPHVE ++D + +N++P ++S+
Sbjct: 961 VIAIFGPSSIHSSPAIQTILDRKEIPHVETYFDRKL----SRHDCLLNLHPHPSVMSQAY 1016
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT-DDYR 183
I+N W + +IY++ ++L L + + VT+ +L D D +R
Sbjct: 1017 LEIVNKWGWRSLVVIYDSEESLAKLGLFAASC----------KQRVTLSRLELDMYDTFR 1066
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
L IK + E++ +L+CS+D +LKQA++V +M + +YI++ ++ T+D
Sbjct: 1067 TSLTSIKKTGETNFILECSVDILEAVLKQAQQVGMMTERHSYIITK----LDLQTIDLAP 1122
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
FQ ANIT R+ NP N I S+ + +E +G ++ + AL+ D+V L
Sbjct: 1123 FQYSEANITGFRIFNPENAEIMSLADQIYTQEKYKGIP---SGWLLRHQTALLIDSVDLL 1179
Query: 304 AAALQ--SLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRN 360
A+ +L E+ + + L C ++W G I N MK TI G+TG ++ D++ G R
Sbjct: 1180 HQAVLDLTLSEQVVIQSQTLYCNTSNNWDSGHTIVNYMKGQTIKGLTGVVHFDNE-GFRR 1238
Query: 361 SFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRV 420
F+L+ +E +G W+ GL+ +R + K + +++ L +KTF +
Sbjct: 1239 DFTLDILELSLGGLLRIGAWSFFSGLSLNRPP---NLSKVKIVDDANLV--NKTFTVITC 1293
Query: 421 LFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
L PY M T +L+G + +DL+ ++ L F Y +++ + G N TG
Sbjct: 1294 L--TTPYGMLKETTQQLFGNDRFEGFGIDLMDELSKMLGFNYTIIIQEDGYNGNYNQTTG 1351
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
+WNGLIG + +ADLAI DLT+T+ER A VDFT+ FM LGISILY+KP P LF F+
Sbjct: 1352 EWNGLIGAILSGKADLAIADLTVTAEREAVVDFTLQFMNLGISILYKKPKPVPPSLFMFV 1411
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S+ VW+ + Y VS+ F + R+S
Sbjct: 1412 SPFSYTVWILLVVTYFLVSMCFFVMGRLS 1440
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S MES RPSVF SN EGVERVVK KG YAF MEST IEY +E+NC+L
Sbjct: 720 RDSNFSTYQRMWSFMESQRPSVFTASNVEGVERVVKGKGSYAFLMESTSIEYVIERNCEL 779
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGG+LDSKGYGIAM P S F S KL+ +G+ +++K
Sbjct: 780 TQVGGMLDSKGYGIAMPPNSPFRTAISGTILKLQE--EGKLHILK 822
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ +DLAK +IKYG + G
Sbjct: 654 KAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESADDLAKQTKIKYGALRGG 713
Query: 814 STRNFFK 820
ST FF+
Sbjct: 714 STAAFFR 720
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
+STR AG+WWFFTLIM+SSYTANLAAFLT + P NV++L++ IKYG G+
Sbjct: 1485 GISTRTGAGVWWFFTLIMVSSYTANLAAFLTVETLVTPFSNVKELSEQTEIKYGAKRGGA 1544
Query: 815 TRNFFK 820
T NFFK
Sbjct: 1545 TANFFK 1550
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVF----------VKSNKEGVERVVKEKG 611
+S + ++Y AK + ++ +S R ++ +SN EGVER E+
Sbjct: 1529 LSEQTEIKYGAKRGGATANFFKNAGNDSVRSRIWHFMATHDEEMTESNDEGVERT--EEK 1586
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
YAFFMEST IEY +E++C L VG LD KGY IAM
Sbjct: 1587 HYAFFMESTTIEYVIERHCSLASVGAPLDDKGYAIAM 1623
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ + +L G Y+VDLI I+ L F Y L + YG+LN +T +W+G+
Sbjct: 421 PYVMRKEASEKLTGNAQFEGYAVDLIHEISRVLGFNYTIRLAPDGRYGSLNRETKEWDGM 480
Query: 726 IGELQEQ 732
I EL +Q
Sbjct: 481 IRELLDQ 487
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M T +L+G + +DL+ ++ L F Y +++ + G N TG+WNGL
Sbjct: 1297 PYGMLKETTQQLFGNDRFEGFGIDLMDELSKMLGFNYTIIIQEDGYNGNYNQTTGEWNGL 1356
Query: 726 IGEL 729
IG +
Sbjct: 1357 IGAI 1360
>gi|189234774|ref|XP_974911.2| PREDICTED: similar to CG3822 CG3822-PA [Tribolium castaneum]
Length = 949
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/573 (42%), Positives = 349/573 (60%), Gaps = 42/573 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F P +++ AF AV +IN D LP L ++ + DS H +K +C+
Sbjct: 24 IRIGGLFHPADDKQEIAFRYAVEKINSDRMILPRSK-LSAQIEKMSPQDSFHASKKVCHL 82
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP +
Sbjct: 83 LRSGVAAIFGPQSAHTASHVQSICDTMEIPHLETRWD---YRLRRESCL-VNLYPHPTTL 138
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK ++ W +FTIIYE ++ LV LQ++L+ AH P +T+RQL ++
Sbjct: 139 SKAYVDLVKAWGWKSFTIIYENNEGLVRLQELLK-AHG------PYEFPITVRQLG-ESS 190
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+ESHI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ H VD
Sbjct: 191 DYRPLLKQIKNSAESHIVLDCSTERIYDVLKQAQQIGMMSDYHSYLITS----LDLHGVD 246
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE--NERGR-SLNVRAETVKIEAALMY 297
++F+ G NIT R+++P P +R ++ W E N++G S +RAET ALMY
Sbjct: 247 LEEFKYGGTNITAFRLVDPDGPEVRKVVREWNLSEAKNKKGEISSIIRAET-----ALMY 301
Query: 298 DAVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
DAV+LFA AL L + + PLSC+ +W HG + N MK + + G+TG I D Q
Sbjct: 302 DAVHLFAKALHDLDTSQQIDIKPLSCDAVDTWPHGYSLINYMKIVEMRGLTGVIKFDHQ- 360
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R+ F L+ +E + K +GTWN+ G+N +RT + + E I+N+T VT+
Sbjct: 361 GFRSDFVLDIIELNKEGLKKIGTWNSTEGVNFTRTYGEAYTQIVEIIQNKTFVVTT---- 416
Query: 417 KLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLN 470
PY+M+ + +L G Y+VDLI I+ L F Y L + YG+LN
Sbjct: 417 -----ILSSPYVMRKEASEKLTGNAQFEGYAVDLIHEISRVLGFNYTIRLAPDGRYGSLN 471
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
+T +W+G+I EL +Q+ADLAI DLTIT +R AVDFTMPFM LGISILYRKP K+ P+L
Sbjct: 472 RETKEWDGMIRELLDQKADLAIADLTITYDREQAVDFTMPFMNLGISILYRKPIKQPPNL 531
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL PLS DVW+YMATAYLGVS+LLF LAR +
Sbjct: 532 FSFLSPLSLDVWIYMATAYLGVSVLLFILARFT 564
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S MES RPSVF SN EGVERVVK KG YAF MEST IEY +E+NC+L
Sbjct: 720 RDSNFSTYQRMWSFMESQRPSVFTASNVEGVERVVKGKGSYAFLMESTSIEYVIERNCEL 779
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGG+LDSKGYGIAM P S F S KL+ +G+ +++K
Sbjct: 780 TQVGGMLDSKGYGIAMPPNSPFRTAISGTILKLQE--EGKLHILK 822
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ +DLAK +IKYG + G
Sbjct: 654 KAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESADDLAKQTKIKYGALRGG 713
Query: 814 STRNFFK 820
ST FF+
Sbjct: 714 STAAFFR 720
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ + +L G Y+VDLI I+ L F Y L + YG+LN +T +W+G+
Sbjct: 421 PYVMRKEASEKLTGNAQFEGYAVDLIHEISRVLGFNYTIRLAPDGRYGSLNRETKEWDGM 480
Query: 726 IGELQEQ 732
I EL +Q
Sbjct: 481 IRELLDQ 487
>gi|195569327|ref|XP_002102662.1| GD20025 [Drosophila simulans]
gi|194198589|gb|EDX12165.1| GD20025 [Drosophila simulans]
Length = 853
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/572 (43%), Positives = 345/572 (60%), Gaps = 40/572 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI G+F P ++ AF AV RIN D LP ++ I + + +DS H K +C
Sbjct: 30 IKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQI-ERISPFDSFHAGKRVCGL 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AAIFGPQS + ++S+C +IPH+E WD Y + VN+YP + +
Sbjct: 89 LNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWD---YRLRRESCL-VNLYPHPNTL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK I FT IYE +D +V LQ++L+ AH + P +T+RQL D+
Sbjct: 145 SKDYGDIERHWGKKNFTFIYENNDRIVRLQELLK-AHG----MTPF--PITVRQLS-DSG 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+IKNS+E+HI+LDCS ++ +LKQA+++ +M DY +Y+++ ++ HTV+
Sbjct: 197 DYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS----LDLHTVN 252
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R+IN + ++ W +E RS N+ TV+ E ALMYDAV
Sbjct: 253 LDEFRYGGTNITGFRLIN--EKIVSDVVRQWSIDEKGLLRSANL--TTVRSETALMYDAV 308
Query: 301 YLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + P+SC+ S+WQHG + N MK + + G+T I D Q G R
Sbjct: 309 HLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ-GFR 367
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAF--GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ VE + +GTWN+ G+N +RT Q +E + ++N+TL VT+
Sbjct: 368 TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTT----- 422
Query: 418 LRVLFQGEPYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN
Sbjct: 423 ----ILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNK 478
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG+I EL EQRADLAI DLTIT ER AVDFT PFM LG+SILYRKP K+ P+LF
Sbjct: 479 LTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS DVW+YMATAYLGVS+LLF LA+ +
Sbjct: 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKFT 570
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +R++Y A ++S +S YQRM S MES+RPSVF SN EGVERV K KG
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKG 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY E+NC+L QVGG+LD+K YGIA P
Sbjct: 717 SYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATP 754
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ F+ +A+STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI++ ED
Sbjct: 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK RIKYG ++ GST FF+
Sbjct: 657 LAKQTRIKYGALKGGSTAAFFR 678
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 672 PYMMKN----PETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ P +G + GY+VDLI I+ L F YK L + +YG+LN TG+WNG+
Sbjct: 427 PYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 486
Query: 726 IGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
I EL EQ D I F + F F+N VS
Sbjct: 487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVS 524
>gi|328705128|ref|XP_003242706.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 2
[Acyrthosiphon pisum]
Length = 897
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/574 (40%), Positives = 349/574 (60%), Gaps = 35/574 (6%)
Query: 1 MKIVGIFGPNEEEV-ATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
+KIV +F N++ A+ ++ + +N LP + I+ P ++V N D + +++C+
Sbjct: 36 VKIVALFNENDDSANQLAYNVSAKIVNIMDTVLPKNKIV-PRSEYVVN-DMYNVTRVVCD 93
Query: 60 ATSEGIAA-IFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ GIAA I G + N++ S+ IP +E W K F + +N+YP+
Sbjct: 94 SLKLGIAAFIDGTDDEDIANVVRSISTRTQIPFIETHW---KTFHRPPDPYAINIYPDPS 150
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
L++K I II DMDW++FT IYE+ ++L+ L+ +L H D PG+ S+ I Q+PP
Sbjct: 151 LLAKAIRDIILDMDWNSFTAIYESPESLIRLKALL--MHFDYGHKAPGK-SIKIVQIPP- 206
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
TDD+RPL KE+K S E HI+LD ++ + IL QA+EVH MGDYQ+++++ ++AHT
Sbjct: 207 TDDFRPLFKELKLSGEKHIILDYEVEHIMHILGQAEEVHFMGDYQSFVITN----LDAHT 262
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ F +F ANIT +R+INP + H+R+ + ++ E + GR + +T+K + AL+YD
Sbjct: 263 LSFSEFHKSMANITLIRLINPESQHVRNAVEEIVFNEQKSGRISVLSPDTMKTKTALLYD 322
Query: 299 AVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
AV FA +L L + + P ++C++ W HG + N M+ + ++G+TG++ D++TG
Sbjct: 323 AVNFFATSLHGLVATQTMGPMRIACDDIKPWVHGYSLINYMRVMEVNGLTGKMRFDAETG 382
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
RN F L+ V + LG+W+ + +R+V +++ E + I N+T V K
Sbjct: 383 NRNYFKLDVVRVQESKKHRLGSWDPELNMTLTRSVSEINSEFAQSITNKTFIVVGKLV-- 440
Query: 418 LRVLFQGEPYMMKNPETGE--------LYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+PY+M+ T + G++ DL++ +A F +KF ++ YG +
Sbjct: 441 -------QPYLMRCNATEKGMDKDEECFEGFAYDLVEEMAKYNGFKFKFTTNQD--YGIM 491
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
N +TGKWNG+IGELQ RADLAICDLTIT +RR AVDFT PFMTLGISILY KP KK+P
Sbjct: 492 NHKTGKWNGMIGELQSMRADLAICDLTITFDRRNAVDFTTPFMTLGISILYAKPEKKKPQ 551
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LF FL PLSF VW+Y ATAYLGVSL LF LARI+
Sbjct: 552 LFWFLNPLSFSVWMYTATAYLGVSLFLFMLARIT 585
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 66/77 (85%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN+SLYQRM S ME+S P+VF KSN+EGV+RV+K KG+YAF MES+ IEY+ E+NC+L
Sbjct: 695 QKSNLSLYQRMWSVMEASNPTVFTKSNQEGVDRVLKGKGRYAFLMESSSIEYQTERNCNL 754
Query: 633 MQVGGLLDSKGYGIAMP 649
M++G LDSKGYGIAMP
Sbjct: 755 MEIGNTLDSKGYGIAMP 771
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTRLVAGMWWFF LIM SSYTANL A +T+ R++ PIKNV+DL+K I+YGC E G
Sbjct: 629 QAVSTRLVAGMWWFFALIMTSSYTANLTASITSGRLDTPIKNVDDLSKDSNIEYGCYEEG 688
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 689 STASFFQ 695
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 671 EPYMMKNPETGE--------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 722
+PY+M+ T + G++ DL++ +A F +KF ++ YG +N +TGKW
Sbjct: 441 QPYLMRCNATEKGMDKDEECFEGFAYDLVEEMAKYNGFKFKFTTNQD--YGIMNHKTGKW 498
Query: 723 NGLIGELQ 730
NG+IGELQ
Sbjct: 499 NGMIGELQ 506
>gi|328705126|ref|XP_003242705.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 1
[Acyrthosiphon pisum]
Length = 897
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 349/574 (60%), Gaps = 35/574 (6%)
Query: 1 MKIVGIFGPNEEEV-ATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
+KIV +F N++ A+ ++ + +N LP + I+ P ++V N D + +++C+
Sbjct: 36 VKIVALFNENDDSANQLAYNVSAKIVNIMDTVLPKNKIV-PRSEYVVN-DMYNVTRVVCD 93
Query: 60 ATSEGIAA-IFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ GIAA I G + N++ S+ IP +E W K F + +N+YP+
Sbjct: 94 SLKLGIAAFIDGTDDEDIANVVRSISTRTQIPFIETHW---KTFHRPPDPYAINIYPDPS 150
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
L++K I II DMDW++FT IYE+ ++L+ L+ +L H D PG+ S+ I Q+PP
Sbjct: 151 LLAKAIRDIILDMDWNSFTAIYESPESLIRLKALL--MHFDYGHKAPGK-SIKIVQIPP- 206
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
TDD+RPL KE+K S E HI+LD ++ + IL QA+EVH MGDYQ+++++ ++AHT
Sbjct: 207 TDDFRPLFKELKLSGEKHIILDYEVEHIMHILGQAEEVHFMGDYQSFVITN----LDAHT 262
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ F +F ANIT +R+INP + H+R+ + ++ E + GR + +T+K + AL+YD
Sbjct: 263 LSFSEFHKSMANITLIRLINPESQHVRNAVEEIVFNEQKSGRISVLSPDTMKTKTALLYD 322
Query: 299 AVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
AV FA +L L + + P ++C++ W HG + N M+ + ++G+TG++ D++TG
Sbjct: 323 AVNFFATSLHGLVATQTMGPMRIACDDIKPWVHGYSLINYMRVMEVNGLTGKMRFDAETG 382
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
RN F L+ V + LG+W+ + +R+V +++ E + I N+T V K
Sbjct: 383 NRNYFKLDVVRVQESKKHRLGSWDPELNMTLTRSVSEINSEFAQSITNKTFIVVGKLV-- 440
Query: 418 LRVLFQGEPYMMKNPETGE--------LYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+PY+M+ T + G++ DL++ +A F +KF ++ YG +
Sbjct: 441 -------QPYLMRCNATEKGMDKDEECFEGFAYDLVEEMAKYNGFKFKFTTNQD--YGIM 491
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
N +TGKWNG+IGELQ RADLAICDLTIT +RR AVDFT PFMTLGISILY KP KK+P
Sbjct: 492 NHKTGKWNGMIGELQSMRADLAICDLTITFDRRNAVDFTTPFMTLGISILYAKPEKKKPQ 551
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LF FL PLSF VW+Y ATAYLGVSL LF LAR++
Sbjct: 552 LFWFLNPLSFSVWMYTATAYLGVSLFLFMLARMT 585
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 66/77 (85%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN+SLYQRM S ME+S P+VF KSN+EGV+RV+K KG+YAF MES+ IEY+ E+NC+L
Sbjct: 695 QKSNLSLYQRMWSVMEASNPTVFTKSNQEGVDRVLKGKGRYAFLMESSSIEYQTERNCNL 754
Query: 633 MQVGGLLDSKGYGIAMP 649
M++G LDSKGYGIAMP
Sbjct: 755 MEIGNTLDSKGYGIAMP 771
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 62/84 (73%)
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
+ F I S+L + +AVSTRLVAGMWWFF LIM SSYTANL A +T+ R++ PIKNV
Sbjct: 612 LWFSIGSVLCAGCEVLPKAVSTRLVAGMWWFFALIMTSSYTANLTASITSGRLDTPIKNV 671
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
+DL+K I+YGC E GST +FF+
Sbjct: 672 DDLSKDSNIEYGCYEEGSTASFFQ 695
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 671 EPYMMKNPETGE--------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 722
+PY+M+ T + G++ DL++ +A F +KF ++ YG +N +TGKW
Sbjct: 441 QPYLMRCNATEKGMDKDEECFEGFAYDLVEEMAKYNGFKFKFTTNQD--YGIMNHKTGKW 498
Query: 723 NGLIGELQ 730
NG+IGELQ
Sbjct: 499 NGMIGELQ 506
>gi|328705130|ref|XP_003242707.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 3
[Acyrthosiphon pisum]
Length = 943
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 349/574 (60%), Gaps = 35/574 (6%)
Query: 1 MKIVGIFGPNEEEV-ATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
+KIV +F N++ A+ ++ + +N LP + I+ P ++V N D + +++C+
Sbjct: 36 VKIVALFNENDDSANQLAYNVSAKIVNIMDTVLPKNKIV-PRSEYVVN-DMYNVTRVVCD 93
Query: 60 ATSEGIAA-IFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ GIAA I G + N++ S+ IP +E W K F + +N+YP+
Sbjct: 94 SLKLGIAAFIDGTDDEDIANVVRSISTRTQIPFIETHW---KTFHRPPDPYAINIYPDPS 150
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
L++K I II DMDW++FT IYE+ ++L+ L+ +L H D PG+ S+ I Q+PP
Sbjct: 151 LLAKAIRDIILDMDWNSFTAIYESPESLIRLKALL--MHFDYGHKAPGK-SIKIVQIPP- 206
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
TDD+RPL KE+K S E HI+LD ++ + IL QA+EVH MGDYQ+++++ ++AHT
Sbjct: 207 TDDFRPLFKELKLSGEKHIILDYEVEHIMHILGQAEEVHFMGDYQSFVITN----LDAHT 262
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ F +F ANIT +R+INP + H+R+ + ++ E + GR + +T+K + AL+YD
Sbjct: 263 LSFSEFHKSMANITLIRLINPESQHVRNAVEEIVFNEQKSGRISVLSPDTMKTKTALLYD 322
Query: 299 AVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
AV FA +L L + + P ++C++ W HG + N M+ + ++G+TG++ D++TG
Sbjct: 323 AVNFFATSLHGLVATQTMGPMRIACDDIKPWVHGYSLINYMRVMEVNGLTGKMRFDAETG 382
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
RN F L+ V + LG+W+ + +R+V +++ E + I N+T V K
Sbjct: 383 NRNYFKLDVVRVQESKKHRLGSWDPELNMTLTRSVSEINSEFAQSITNKTFIVVGKLV-- 440
Query: 418 LRVLFQGEPYMMKNPETGE--------LYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+PY+M+ T + G++ DL++ +A F +KF ++ YG +
Sbjct: 441 -------QPYLMRCNATEKGMDKDEECFEGFAYDLVEEMAKYNGFKFKFTTNQD--YGIM 491
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
N +TGKWNG+IGELQ RADLAICDLTIT +RR AVDFT PFMTLGISILY KP KK+P
Sbjct: 492 NHKTGKWNGMIGELQSMRADLAICDLTITFDRRNAVDFTTPFMTLGISILYAKPEKKKPQ 551
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LF FL PLSF VW+Y ATAYLGVSL LF LAR++
Sbjct: 552 LFWFLNPLSFSVWMYTATAYLGVSLFLFMLARMT 585
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 66/77 (85%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN+SLYQRM S ME+S P+VF KSN+EGV+RV+K KG+YAF MES+ IEY+ E+NC+L
Sbjct: 741 QKSNLSLYQRMWSVMEASNPTVFTKSNQEGVDRVLKGKGRYAFLMESSSIEYQTERNCNL 800
Query: 633 MQVGGLLDSKGYGIAMP 649
M++G LDSKGYGIAMP
Sbjct: 801 MEIGNTLDSKGYGIAMP 817
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTRLVAGMWWFF LIM SSYTANL A +T+ R++ PIKNV+DL+K I+YGC E G
Sbjct: 675 QAVSTRLVAGMWWFFALIMTSSYTANLTASITSGRLDTPIKNVDDLSKDSNIEYGCYEEG 734
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 735 STASFFQ 741
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 671 EPYMMKNPETGE--------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 722
+PY+M+ T + G++ DL++ +A F +KF ++ YG +N +TGKW
Sbjct: 441 QPYLMRCNATEKGMDKDEECFEGFAYDLVEEMAKYNGFKFKFTTNQD--YGIMNHKTGKW 498
Query: 723 NGLIGELQ 730
NG+IGELQ
Sbjct: 499 NGMIGELQ 506
>gi|328705159|ref|XP_001942991.2| PREDICTED: hypothetical protein LOC100163311 [Acyrthosiphon pisum]
Length = 1734
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/570 (40%), Positives = 337/570 (59%), Gaps = 43/570 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F PN+ F+ A+ +N + L L V+ V DS H +K +C+
Sbjct: 23 IRIGGLFHPNDVNQENVFKHAIHDVNANRNILSRSN-LSGQVEKVSPQDSFHASKRVCSL 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+AA+FGPQS + + ++S+C +IPH+E WD Y + VN+YP ++
Sbjct: 82 LRLGVAAVFGPQSAQISSHVQSICDTMEIPHLETRWD---YKLRRESCL-VNLYPHPTVL 137
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
SK ++ W +FTIIYE+++ LV LQ++L+ A + P +TIRQL D
Sbjct: 138 SKAYLDLVKKWGWKSFTIIYESNEGLVRLQELLK-ARNGALSAYP----ITIRQLGSGRD 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+RPLLK+IKNS+ESH++LDCS +K +LKQA+++ +M DY +Y+++ ++ HT+D
Sbjct: 193 -HRPLLKQIKNSAESHVVLDCSTEKIYDVLKQAQQIGMMSDYHSYLITS----LDLHTID 247
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G NIT R++NP P ++ ++ W G + V + E AL+YDAV
Sbjct: 248 LDEFKYGGTNITGFRLVNPDTPVVQKVLKQW-------GENFTV----MSTETALIYDAV 296
Query: 301 YLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + PLSC+ +W HG + N MK + I G+TG I D+Q G R
Sbjct: 297 HLFARALHDLDSSQKIDIKPLSCDASDTWSHGYSLINYMKIVEISGLTGVIKFDNQ-GFR 355
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F L+ VE + +GTWN++ G+N +R+ + + + N+TL VT
Sbjct: 356 TDFELDVVEVNKEGLSKIGTWNSSQGINFTRSFVEAYSSIVDNLHNKTLVVT-------- 407
Query: 420 VLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
L PY M+ + +L G Y++DLI I+ L F Y L + YG+ + T
Sbjct: 408 -LILSSPYTMRRESSQKLVGNDQFEGYAIDLIYEISKLLGFNYTLKLVPDGRYGSYSEDT 466
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+W+G++GEL +QRADL + DLTIT +R AVDFTMPFM LGISILYRKP K+ P+LFSF
Sbjct: 467 KEWDGMMGELLQQRADLVVADLTITYDREQAVDFTMPFMNLGISILYRKPIKQPPNLFSF 526
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L PLS DVW+YMATAYLGVS+LL+ LAR S
Sbjct: 527 LSPLSLDVWIYMATAYLGVSVLLYILARFS 556
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 203/569 (35%), Positives = 315/569 (55%), Gaps = 46/569 (8%)
Query: 10 NEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAA 67
NEE + TAF+ +V K + + L+ I + V YDS T +C +EG+
Sbjct: 870 NEENSMLETAFKSSVDVAKA--KMIASGVELDVISKIVPLYDSFETQHHVCEMLAEGVTG 927
Query: 68 IFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVI 127
+FGP + + I++S+C +IPH++ WD N+ G +N+YP +++ + I
Sbjct: 928 MFGPSAGDTAPIVQSICDYKEIPHIQTRWDINQ----KRGSCQINLYPHPSTLAEALIDI 983
Query: 128 INDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLK 187
I +DW +FTIIYE +++L+ + +L++ P + IRQL P + YR L+
Sbjct: 984 IIAVDWKSFTIIYENNESLMQITNILKSP--------PTNHPIRIRQLSPGPN-YRKELR 1034
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
EIK+S E+ ILLDCS +L QA++V LMG N+I++ ++ HT+D F+
Sbjct: 1035 EIKDSGETKILLDCSFGILSEVLLQAQQVGLMGSEHNFIIAS----LDMHTLDLDAFKYS 1090
Query: 248 YANITTVRMINPTNPHIRSIMNGWI-----YEENERGRSLNVRAETVKIEAALMYDAVYL 302
NIT +R++ P + + ++ W E +++ V ET+++E+AL+YDAV L
Sbjct: 1091 GTNITGMRLVKPLDSEFQDTVSQWTDNLSPLEPDDK----TVLPETIQLESALIYDAVQL 1146
Query: 303 FAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMK-SITIDGMTGRINLDSQTGRRN 360
F ++ +L + + TP C + SW+HG + N MK ++ G+TG+I D Q G R
Sbjct: 1147 FTTSIYNLSKEFEINETPTPCNSSLSWKHGFTLINYMKMAVNFKGLTGKIKFD-QEGFRT 1205
Query: 361 SFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRV 420
LE V+ + +V GTWNT G+N S T + ++ + R ++ F +
Sbjct: 1206 DIELELVDLTQNGLRVTGTWNTKTGINVSATPKSQTVPGGKEFDLRNMS-----FVVITA 1260
Query: 421 LFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
L + PY M + L G + +DLIK ++ F Y F+++ + G + +T
Sbjct: 1261 LTK--PYGMVKLSSNTLEGNDRYEGFGIDLIKELSEMSGFNYTFIIQEDFNSGYPDEKTK 1318
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
KWNG+IGE+ +ADLAI D+TIT +R VDFT PFM LGISILY+K K P LFSFL
Sbjct: 1319 KWNGMIGEVINGKADLAIADITITRQREHDVDFTSPFMNLGISILYKKSTKSSPSLFSFL 1378
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S VW+++ TAY GVS+LLF +ARIS
Sbjct: 1379 APFSSFVWLWVITAYCGVSVLLFIMARIS 1407
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 64/77 (83%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN YQRM S MESSRPSVF+ SN EGVERVVK KG YAF MEST IEY +E+NC+L
Sbjct: 667 RDSNFITYQRMWSFMESSRPSVFMASNNEGVERVVKGKGNYAFLMESTSIEYVIERNCEL 726
Query: 633 MQVGGLLDSKGYGIAMP 649
QVGGLLDSKGYGIAMP
Sbjct: 727 TQVGGLLDSKGYGIAMP 743
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ EDLAK +IKYG + G
Sbjct: 601 KAVSTRIVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALRGG 660
Query: 814 STRNFFK 820
ST FF+
Sbjct: 661 STAAFFR 667
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGR-IKYGCVEMG 813
AVSTRLVAG+WWFFTLIM+SSYTANLAAFLT ++ P KNVEDL I +G + G
Sbjct: 1452 AVSTRLVAGIWWFFTLIMVSSYTANLAAFLTVESVSEPFKNVEDLVNNQNIITFGLKKKG 1511
Query: 814 STRNFFK 820
ST +F+
Sbjct: 1512 STEEYFR 1518
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 565 GSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY 624
GS Y +++N + Y+++ ++ ++ + + SN EGV++V++E YAFFMEST IEY
Sbjct: 1511 GSTEEYFRESTNPT-YKKIFDILQKNQ-AWYTTSNDEGVDKVLREN--YAFFMESTSIEY 1566
Query: 625 EVEKNCDLMQVGGLLDSKGYGIAM 648
VE+NC L Q+GGLLD+KGYGI M
Sbjct: 1567 MVERNCKLAQIGGLLDNKGYGIVM 1590
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 667 LFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
L PY M+ + +L G Y++DLI I+ L F Y L + YG+ + T
Sbjct: 408 LILSSPYTMRRESSQKLVGNDQFEGYAIDLIYEISKLLGFNYTLKLVPDGRYGSYSEDTK 467
Query: 721 KWNGLIGELQEQ 732
+W+G++GEL +Q
Sbjct: 468 EWDGMMGELLQQ 479
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+ +DLIK ++ F Y F+++ + G + +T KWNG+IGE+
Sbjct: 1283 GFGIDLIKELSEMSGFNYTFIIQEDFNSGYPDEKTKKWNGMIGEV 1327
>gi|157129705|ref|XP_001655465.1| glutamate receptor, ionotropic kainate 1, 2, 3 (glur5, glur6,
glur7) [Aedes aegypti]
gi|108882066|gb|EAT46291.1| AAEL002538-PA [Aedes aegypti]
Length = 925
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/575 (40%), Positives = 346/575 (60%), Gaps = 40/575 (6%)
Query: 3 IVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATS 62
I IF + E AF+ A+ R+N K L PI+++V DS T + +C S
Sbjct: 24 IGAIFHGDNYESEIAFKYAIERVNMHEKHFE----LTPIIKYVSKDDSYKTERKVCELVS 79
Query: 63 EGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKY--FIPTNGVHGVNVYPESHLI 120
EGI AIFGP S+ I+ S+C+ +IPH+ WDP + + P +N+YPE+ ++
Sbjct: 80 EGITAIFGPSSMLTSGIVSSICKTIEIPHIITHWDPEPFGGWDPELQAMTINLYPEADVL 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ + +I D W +FTIIY++ + L+ L+ VL+ H PG +T+RQ+ D+
Sbjct: 140 SRALQDLIVDYTWKSFTIIYDSDEGLMRLKDVLQ-IHG------PGDNPITVRQID-DSP 191
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYRPLLK+I++S ESHI+L+ DK + IL+QAKEV ++ +YQ+YI++ ++AHT+D
Sbjct: 192 DYRPLLKDIQSSGESHIILEVHPDKILEILRQAKEVKMLEEYQSYIITS----LDAHTLD 247
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F++ + +NITT+R+++ + I++ ++ W E + V E V E+AL +DAV
Sbjct: 248 FEELKYSRSNITTLRLMDTKSFDIKNAVHDWEQGEARMKKVFRVSPEHVHTESALYHDAV 307
Query: 301 YLFAAALQSLGERKPL-PTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
L+A A++ L + + P+ LSC +N W GL I N MK T G++G I D G
Sbjct: 308 KLYATAIRELDATEEITPSRLSCGSKNLRQWPFGLRIVNYMKVKTEHGISGPIIFDDY-G 366
Query: 358 RRNSFSLEFVEYVSDQ-WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
RR F L+ VE + +K + W+ G+ ++R+ E + + E + N+T V S+
Sbjct: 367 RRTHFQLDIVELNHQEGFKKIAVWDPTNGIIYTRSQEDVHLQIVESLHNKTFIVASRL-- 424
Query: 417 KLRVLFQGEPY-MMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGT 468
G P+ MMK + GE GYSV+LI I+ L F Y+ L + YG+
Sbjct: 425 -------GAPFLMMKEKKEGEFLEGNNRFEGYSVELIDGISKILGFQYRMELVPDGKYGS 477
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
N +T +W+GL+ L +++ADLAICDLTIT ERR AVDFTMPFMTLGISILY KP +
Sbjct: 478 YNKETKRWDGLVKHLLDRKADLAICDLTITYERRTAVDFTMPFMTLGISILYAKPVPQPK 537
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DLFSFL PLS DVW+YMATAYLGVS+LLF L+R++
Sbjct: 538 DLFSFLSPLSLDVWIYMATAYLGVSVLLFVLSRMA 572
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 87/138 (63%), Gaps = 15/138 (10%)
Query: 548 AYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVV 607
A LG S L FF +NSN S YQRM +AMES+RPSVF KSN EG +RV+
Sbjct: 672 AVLGGSTLSFF--------------RNSNFSTYQRMWAAMESTRPSVFTKSNDEGRDRVL 717
Query: 608 KEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVL 667
K +G YAF MEST +EY E+ C+L Q+GGLLDSKGYGIAMP + + + A L++
Sbjct: 718 KGRGLYAFLMESTSLEYITERYCELTQIGGLLDSKGYGIAMPVNSPY-RTAISGAVLKMQ 776
Query: 668 FQGEPYMMKNPETGELYG 685
+G+ + +K E+YG
Sbjct: 777 EEGKLHQLKTRWWKEMYG 794
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+V+GMWWFF LIM+SSYTANLAAFLT RM+ I++ EDLA+ +IKYG V G
Sbjct: 617 KAVSTRVVSGMWWFFALIMLSSYTANLAAFLTMERMDASIESAEDLAQQSKIKYGAVLGG 676
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 677 STLSFFR 683
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 670 GEPY-MMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P+ MMK + GE GYSV+LI I+ L F Y+ L + YG+ N +T +
Sbjct: 425 GAPFLMMKEKKEGEFLEGNNRFEGYSVELIDGISKILGFQYRMELVPDGKYGSYNKETKR 484
Query: 722 WNGLIGELQEQ 732
W+GL+ L ++
Sbjct: 485 WDGLVKHLLDR 495
>gi|158289672|ref|XP_311343.4| AGAP000803-PA [Anopheles gambiae str. PEST]
gi|157018630|gb|EAA06913.4| AGAP000803-PA [Anopheles gambiae str. PEST]
Length = 939
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/569 (39%), Positives = 341/569 (59%), Gaps = 48/569 (8%)
Query: 13 EVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQ 72
E AF AV R+N K L PIV++V DS T + +C +EG+ A+FGP
Sbjct: 48 ESEIAFRYAVERVNMHEKHFE----LVPIVRYVSPEDSFRTERKVCELAAEGVTAVFGPS 103
Query: 73 SIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG------VNVYPESHLISKGISV 126
S+ I+ S+C+ +IPH+ WDP P G+ +N+YPE+ ++S+ ++
Sbjct: 104 SLLTAGIVGSICKTLEIPHIITHWDPE----PLGGIEAELRAMTINLYPEADVLSRALAD 159
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLL 186
+I D W +FTIIY++ + L+ L+ +L+ H P +T+RQ+ D D YRPLL
Sbjct: 160 LIVDYSWKSFTIIYDSDEGLMRLKDILQ-IHG------PADAPITVRQIDDDPD-YRPLL 211
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
K+I++S ESHI+L+ D+ + +L+QAKEV ++ +YQ+YI++ ++AHT+DF++ +
Sbjct: 212 KDIQSSGESHIILEIRPDRILELLRQAKEVKMLEEYQSYIITS----LDAHTIDFEELRY 267
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAA 306
+NIT +R+++ + I++ ++ W E R V E V E+AL DAV ++A A
Sbjct: 268 SRSNITALRLMDTKSFDIKNAVHDWEQGEARMKRPFRVSPEHVHTESALYNDAVKIYATA 327
Query: 307 LQSLGERKPL-PTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFS 363
++ L + + P LSC +N W GL I N MK T G+TG I D GRR F
Sbjct: 328 IRELDATEEITPARLSCGSKNLRQWPFGLRIVNYMKVKTEHGITGPIIFD-DFGRRAHFH 386
Query: 364 LEFVEYVSDQ-WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
L+ +E D+ +K + TW+ G+N++R+ ++ + E ++N+T V S+
Sbjct: 387 LDIIELSKDEGFKKIATWDPTHGVNYTRSQGEVYSQIVESLQNKTFIVASRI-------- 438
Query: 423 QGEPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++M K + GE GYS++LI I+ L F Y+ L + YG+ N T
Sbjct: 439 -GAPFLMFKEKKDGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYNKVTK 497
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
KW+GL+ L +++ADLA+CDLTIT ERR AVDFTMPFMTLGISILY KP ++ DLFSFL
Sbjct: 498 KWDGLVKYLLDRKADLAVCDLTITYERRTAVDFTMPFMTLGISILYAKPVQQPKDLFSFL 557
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PLS DVW+YMATAYLGVS+LLF L+R++
Sbjct: 558 SPLSLDVWIYMATAYLGVSVLLFVLSRMA 586
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN S YQRM ++MES+RPSVF KSN EG +RV+K K YAF MEST +EY E+ CDL
Sbjct: 696 QTSNFSTYQRMWASMESARPSVFTKSNDEGRDRVIKGKRMYAFLMESTSLEYITERYCDL 755
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYG 685
Q+GGLLDSKGYGIAMP + + + A L++ +G+ Y +K E+ G
Sbjct: 756 TQIGGLLDSKGYGIAMPVNSPY-RTAISGAVLKMQEEGKLYQLKTRWWKEMRG 807
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STRLVAGMWWFF LIM+SSYTANLAAFLT RM+ I++ EDLAK +IKYG V G
Sbjct: 630 KAISTRLVAGMWWFFALIMLSSYTANLAAFLTMERMDATIESAEDLAKQSKIKYGVVMGG 689
Query: 814 STRNFFK 820
ST FF+
Sbjct: 690 STMAFFQ 696
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 670 GEPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++M K + GE GYS++LI I+ L F Y+ L + YG+ N T K
Sbjct: 439 GAPFLMFKEKKDGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYNKVTKK 498
Query: 722 WNGLIGELQEQ 732
W+GL+ L ++
Sbjct: 499 WDGLVKYLLDR 509
>gi|194878381|ref|XP_001974051.1| GG21289 [Drosophila erecta]
gi|190657238|gb|EDV54451.1| GG21289 [Drosophila erecta]
Length = 1000
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/569 (39%), Positives = 336/569 (59%), Gaps = 38/569 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L ++ L PIV + DS K++CN S+G+
Sbjct: 28 IFTSDKDESEIAFRTAVDRAN----ILERNVELVPIVVYANTDDSFIMEKMVCNLISQGV 83
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVNVYPESHLISKG 123
AIFGP + + +II S+C DIPH+ W PN+ IP + +NV+P++ L+S+G
Sbjct: 84 IAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLNVHPDNLLLSQG 142
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
++ I+ W +FT++YET L LQ +L+ P T++QL PD DD+R
Sbjct: 143 LAEIVQSFSWRSFTVVYETDKELQQLQDILQVGE-------PSSNPTTLKQLGPD-DDHR 194
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P LKEIK S+++ ++L C+ DK + IL+QA E+ ++G+YQ+ + L ++ H++DF +
Sbjct: 195 PFLKEIKLSTDNCLILHCAPDKLLKILQQASELKMLGEYQSIFIPL----LDTHSMDFGE 250
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
ANITTVR+++PT+ H++++++ W E GR V VK + L+ DAV+LF
Sbjct: 251 LSGVDANITTVRLMDPTDFHVKNVVHDWEEREKREGRYFKVDPNKVKSQMILLNDAVWLF 310
Query: 304 AAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
A L LG + L P L C W G I +K+ + + TGRI+ + + G+R+ F
Sbjct: 311 AKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFN-ENGQRSFF 369
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
+L F+E SD + L TW+ GL+ E+ +K +K+ N+T V+S+
Sbjct: 370 TLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRL-------- 421
Query: 423 QGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++ ++ PE G++ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 422 -GAPFLTLREPEEGQILTGNSRYEGYSIDLIDEIAKMLNFKFEFRMSPDGKYGALNKVTQ 480
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP DLFSFL
Sbjct: 481 TWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFL 540
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 541 SPFSLDVWIYMGSAYLFISLLLFALARMA 569
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 11/119 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+++ S+++Y A ++SN S YQ+M +AMES+ PSVF K+N EGVERV K K
Sbjct: 657 LAAQSKIKYGAMAGGSTIGFFRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKGKN 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLRVLFQ 669
YAF MEST +EY VE+ CDL+Q+GG LD K YGIAMP S + + S KL L Q
Sbjct: 717 LYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLKLGELGQ 775
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG + G
Sbjct: 612 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGG 671
Query: 814 STRNFFK 820
ST FF+
Sbjct: 672 STIGFFR 678
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ PE G++ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 422 GAPFLTLREPEEGQILTGNSRYEGYSIDLIDEIAKMLNFKFEFRMSPDGKYGALNKVTQT 481
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 482 WDGIVRQL 489
>gi|157129703|ref|XP_001655464.1| glutamate receptor, ionotropic kainate 1, 2, 3 (glur5, glur6,
glur7) [Aedes aegypti]
gi|108882065|gb|EAT46290.1| AAEL002506-PA [Aedes aegypti]
Length = 929
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/573 (39%), Positives = 340/573 (59%), Gaps = 39/573 (6%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF + E AF+ A+ R+N K L P++++V DS T K +C SEG
Sbjct: 26 AIFHEDNYEAEIAFKYAIERVNMHEKHFE----LLPMIRYVSPEDSYKTEKKVCELASEG 81
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKY--FIPTNGVHGVNVYPESHLISK 122
+ AIFGP S+ I+ S+C+ +IPH+ WDP + P +N+YPE+ ++S+
Sbjct: 82 VTAIFGPSSMLTSGIVSSICKTIEIPHIITHWDPEPIGGWDPEMQAMTINLYPEADVLSR 141
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
+ +I D W +FTIIY++ D L+ L+ +L+ H P +T+RQ+ D D Y
Sbjct: 142 ALRDLIVDYSWKSFTIIYDSDDGLMRLKDILQ-IHG------PADTPITVRQIDDDPD-Y 193
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQ 242
RPLLK+I+ S ESHI+L+ K + +L+QA+EV ++ +YQ+YI++ ++AHT+DF+
Sbjct: 194 RPLLKDIQASGESHIILEVHPSKILEMLRQAREVKMLEEYQSYIITS----LDAHTLDFE 249
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYL 302
+ + +NITT+R+++ + I++ ++ W E + V E V E+AL +DA L
Sbjct: 250 ELKYSRSNITTLRLMDTKSFEIKNAVHDWEQGEARMKKVFRVSPEHVHTESALYHDAAKL 309
Query: 303 FAAALQSLGERKPL-PTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+A A++ L + + P+ LSC +N W GL I N MK T G+TG I D GRR
Sbjct: 310 YATAIRELDATEEIAPSRLSCGSKNLRQWPFGLRIVNYMKVKTEHGITGPIIFDDN-GRR 368
Query: 360 NSFSLEFVEYVS-DQWKVLGTWNTAFG-LNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
F L+ +E D +K + W+ G +N++R+ E + + E ++N+T V S+ A
Sbjct: 369 THFQLDIIELSQQDGFKKIAVWDPTNGKINYTRSQEDVHLQIVESLQNKTFIVASRLSAP 428
Query: 418 LRVLFQGEPYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLN 470
M+K+ + GE GYS++LI I+ L F Y+ L + YG+ N
Sbjct: 429 F--------LMLKDKKEGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYN 480
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
QT KW+GL+ L +++ADLAICDLTIT ERR AVDFTMPFMTLGISILY KP + DL
Sbjct: 481 KQTKKWDGLVKYLLDRKADLAICDLTITYERRTAVDFTMPFMTLGISILYAKPVPQPKDL 540
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL PLS DVW+YMATAYLGVS+LLF L+R++
Sbjct: 541 FSFLSPLSLDVWIYMATAYLGVSVLLFVLSRMA 573
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 15/138 (10%)
Query: 548 AYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVV 607
A LG S L FF ++SN S YQRM +AMES+RPSVF KSN EG +RV+
Sbjct: 673 AVLGGSTLSFF--------------RSSNFSTYQRMWAAMESTRPSVFTKSNDEGRDRVM 718
Query: 608 KEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVL 667
K +G YAF MEST +EY E+ C+L Q+GGLLDSKGYGIAMP + + + A L++
Sbjct: 719 KGRGLYAFLMESTSLEYITERYCELTQIGGLLDSKGYGIAMPVNSPY-RTAISGAVLKMQ 777
Query: 668 FQGEPYMMKNPETGELYG 685
+G+ + +K E+YG
Sbjct: 778 EEGKLHQLKTRWWKEMYG 795
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFF LIM+SSYTANLAAFLT RM+ I++ EDLAK +IKYG V G
Sbjct: 618 KAVSTRVVAGMWWFFALIMLSSYTANLAAFLTMERMDASIESAEDLAKQSKIKYGAVLGG 677
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 678 STLSFFR 684
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 674 MMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
M+K+ + GE GYS++LI I+ L F Y+ L + YG+ N QT KW+GL+
Sbjct: 431 MLKDKKEGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYNKQTKKWDGLV 490
Query: 727 GELQEQ 732
L ++
Sbjct: 491 KYLLDR 496
>gi|158287191|ref|XP_309276.4| Anopheles gambiae str. PEST AGAP012447-PA [Anopheles gambiae str.
PEST]
gi|157019725|gb|EAA05023.4| AGAP012447-PA [Anopheles gambiae str. PEST]
Length = 932
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/565 (39%), Positives = 339/565 (60%), Gaps = 40/565 (7%)
Query: 13 EVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQ 72
E AF A+ R+N K L PIV++V DS T + +C +EG+ A+FGP
Sbjct: 41 ESEIAFRYAIERVNMHEKHFE----LVPIVRYVSPDDSYKTERKVCELAAEGVTAVFGPS 96
Query: 73 SIENRNIIESMCQMFDIPHVEAFWDPNKY--FIPTNGVHGVNVYPESHLISKGISVIIND 130
SI I+ S+C+ +IPH+ WDP + P +N+YPE+ ++S+ ++ +I D
Sbjct: 97 SILTSGIVGSICKTLEIPHIITHWDPEPFGGLDPDLQAMTINLYPEADVLSRALADLIVD 156
Query: 131 MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIK 190
W +FTIIY++ + L+ L+ +L+ H P +T+RQ+ D DYRPLLK+I+
Sbjct: 157 YSWKSFTIIYDSDEGLMRLKDILQ-IHG------PSDSPITVRQID-DNPDYRPLLKDIQ 208
Query: 191 NSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYAN 250
S ESHI+L+ D+ + +L+QAKEV ++ +YQ+YI++ ++AHT+DF++ + +N
Sbjct: 209 TSGESHIILEIRPDRILELLRQAKEVKMLEEYQSYIITS----LDAHTIDFEELRYSRSN 264
Query: 251 ITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSL 310
IT +R+++ + I++ ++ W E R V E V E+AL DAV ++A A++ L
Sbjct: 265 ITALRLMDTKSFDIKNAVHDWEQGEARMKRQFRVSPEHVHTESALYNDAVKIYATAIREL 324
Query: 311 GERKPL-PTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + P+ LSC +N W GL I N MK T G+TG I D GRR F L+ +
Sbjct: 325 DATEEITPSKLSCGSKNLRQWPFGLRIINYMKVKTEHGITGPIIFD-DFGRRAHFHLDII 383
Query: 368 EYVSDQ-WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
E D+ +K + TW+ G+N++R+ ++ + E ++N+T V S+ G P
Sbjct: 384 ELSKDEGFKKIATWDPTHGVNYTRSQGEVYSQIVESLQNKTFIVASRI---------GAP 434
Query: 427 YMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
++M K + GE GYS++LI I+ L F Y+ L + YG+ N T KW+G
Sbjct: 435 FLMFKEKKDGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYNKVTKKWDG 494
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
L+ L +++ADLA+CDLTIT ERR AVDFTMPFMTLGISILY KP ++ DLFSFL PLS
Sbjct: 495 LVKHLLDRKADLAVCDLTITYERRTAVDFTMPFMTLGISILYAKPVQQPKDLFSFLSPLS 554
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
DVW+Y ATAYLGVS+LLF L+R++
Sbjct: 555 LDVWIYTATAYLGVSVLLFVLSRMA 579
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN S YQRM ++MES RPSVF KSN EG +RV+K K YAF MEST +EY E+ CDL
Sbjct: 689 QTSNFSTYQRMWASMESVRPSVFTKSNDEGRDRVIKGKRMYAFLMESTSLEYITERYCDL 748
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYG 685
Q+GGLLDSKGYGIAMP + + + A L++ +G+ + +K E+ G
Sbjct: 749 TQIGGLLDSKGYGIAMPVNSPY-RTAISGAVLKMQEEGKLHQLKTRWWKEMRG 800
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STRLVAGMWWFF LIM+SSYTANLAAFLT RM+ I++ EDLAK +IKYG + G
Sbjct: 623 KAISTRLVAGMWWFFALIMLSSYTANLAAFLTMERMDATIESAEDLAKQSKIKYGVLMGG 682
Query: 814 STRNFFK 820
ST FF+
Sbjct: 683 STMAFFQ 689
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 670 GEPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++M K + GE GYS++LI I+ L F Y+ L + YG+ N T K
Sbjct: 432 GAPFLMFKEKKDGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYNKVTKK 491
Query: 722 WNGLIGELQEQ 732
W+GL+ L ++
Sbjct: 492 WDGLVKHLLDR 502
>gi|195161696|ref|XP_002021698.1| GL26648 [Drosophila persimilis]
gi|198472833|ref|XP_002133122.1| GA29004 [Drosophila pseudoobscura pseudoobscura]
gi|194103498|gb|EDW25541.1| GL26648 [Drosophila persimilis]
gi|198139181|gb|EDY70524.1| GA29004 [Drosophila pseudoobscura pseudoobscura]
Length = 997
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 335/569 (58%), Gaps = 38/569 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L +I L P V + DS K++CN S+G+
Sbjct: 5 IFTSDKDEAEIAFRTAVDRAN----ILERNIELVPTVVYANTDDSFIMEKMVCNLISQGV 60
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP--TNGVHGVNVYPESHLISKG 123
AIFGP + + +II S+C DIPH+ W PN+ IP + +NV+P++ L+S+G
Sbjct: 61 IAIFGPSTGSSSDIIASICNTLDIPHIVYDWLPNES-IPDRQHSTMTLNVHPDNLLLSQG 119
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
+ I+ W +FTIIYE+ L LQ +L+ P T++QL PD +DYR
Sbjct: 120 FAEIVQSFGWRSFTIIYESDRELQQLQDILQIGE-------PSNMPTTMKQLGPD-EDYR 171
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P LKEIK S+++ +++ CS +++L+QA E+ ++G+YQ+ + L ++ HT+DF +
Sbjct: 172 PFLKEIKLSTDNCLIVHCSPSNLLSLLQQANELKMLGEYQSVFIPL----LDTHTMDFGE 227
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
ANITTVR+++PT+ HI+++++ W E GR V VK L+ DAV+LF
Sbjct: 228 LSGVDANITTVRLMDPTDFHIKNVVHDWEEHEKRDGRYYKVDPGRVKTLMILLNDAVWLF 287
Query: 304 AAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
+ L LG + L P + C+ SW HG I MK+ + + TGRI+ + + G+R+ F
Sbjct: 288 SKGLTELGILEELTAPEVECKRKKSWPHGRRIIEFMKARSDEASTGRIDFN-EYGQRSFF 346
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
+L F+E + + L TW+ GL+ E+ +K +K+ N+T ++S+
Sbjct: 347 TLRFMEVNAGGYLDLATWDPVNGLDILNDDEESEKRVGQKLSNKTFIISSRL-------- 398
Query: 423 QGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++ +K PE GE+ GYS+DLI IA LNF Y+F + + YG+ NP T
Sbjct: 399 -GAPFLTLKEPEEGEVLYGNARYEGYSIDLIDAIAQMLNFKYEFRMSPDGRYGSRNPTTQ 457
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP DLFSFL
Sbjct: 458 LWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPIPPTDLFSFL 517
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 518 SPFSLDVWIYMGSAYLFISLLLFALARMA 546
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 73/118 (61%), Gaps = 15/118 (12%)
Query: 548 AYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVV 607
A LG S L FF ++SN + YQ+M +AMES+ PSVF K+N EGVERV
Sbjct: 644 AMLGGSTLGFF--------------RDSNFTTYQKMWTAMESASPSVFTKTNDEGVERVQ 689
Query: 608 KEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKL 664
K K YAF MEST +EY VE+ CDL+Q+GG LD K YGIAMP S + + S KL
Sbjct: 690 KGKNLYAFMMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISGAVLKL 747
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I N EDLA +IKYG + G
Sbjct: 589 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQGNSISNAEDLAAQTKIKYGAMLGG 648
Query: 814 STRNFFK 820
ST FF+
Sbjct: 649 STLGFFR 655
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ +K PE GE+ GYS+DLI IA LNF Y+F + + YG+ NP T
Sbjct: 399 GAPFLTLKEPEEGEVLYGNARYEGYSIDLIDAIAQMLNFKYEFRMSPDGRYGSRNPTTQL 458
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 459 WDGIVRQL 466
>gi|195475931|ref|XP_002090236.1| GE12906 [Drosophila yakuba]
gi|194176337|gb|EDW89948.1| GE12906 [Drosophila yakuba]
Length = 994
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 333/569 (58%), Gaps = 38/569 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L ++ L PIV + DS K++CN S+G+
Sbjct: 28 IFTSDKDESEIAFRTAVDRAN----ILERNVELVPIVVYANTDDSFIMEKMVCNLISQGV 83
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVNVYPESHLISKG 123
AIFGP + + +II S+C DIPH+ W PN+ IP + +NV+P++ L+S+G
Sbjct: 84 IAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLNVHPDNLLLSQG 142
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
++ I+ W +FT++YE L LQ +L+ P T++QL PD DD+R
Sbjct: 143 LAEIVQSFAWRSFTVVYEADKELQQLQDILQIGE-------PSSNPTTVKQLGPD-DDHR 194
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P LKEIK S+++ ++L C + + IL+QA E+ ++G+YQ+ + L ++ H++DF +
Sbjct: 195 PFLKEIKLSTDNCLILHCGPENLLKILQQANELKMLGEYQSVFIPL----LDTHSIDFGE 250
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
ANITTVR+++PT+ H++++++ W E GR V VK + L+ DAV+LF
Sbjct: 251 LSGVDANITTVRLMDPTDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQMILLNDAVWLF 310
Query: 304 AAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
+ L LG + L P L C W G I +K+ + + TGRI+ + + G+RN F
Sbjct: 311 SKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFN-ENGQRNFF 369
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
+L F+E SD + L TW+ GL+ E+ +K +K+ N+T V+S+
Sbjct: 370 TLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRL-------- 421
Query: 423 QGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++ ++ PE GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 422 -GAPFLTLREPEEGEVLTGNSRYEGYSIDLIDEIAKMLNFKFEFRMSPDGKYGALNKVTQ 480
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP DLFSFL
Sbjct: 481 TWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFL 540
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 541 SPFSLDVWIYMGSAYLFISLLLFALARMA 569
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 11/119 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+++ S+++Y A ++SN S YQ+M +AMES+ PSVF K+N EGVERV K K
Sbjct: 657 LAAQSKIKYGAMAGGSTIAFFRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKGKN 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLRVLFQ 669
YAF MEST +EY VE+ CDL+Q+GG LD K YGIAMP S + + S KL L Q
Sbjct: 717 LYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLKLGELGQ 775
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG + G
Sbjct: 612 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGG 671
Query: 814 STRNFFK 820
ST FF+
Sbjct: 672 STIAFFR 678
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ PE GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 422 GAPFLTLREPEEGEVLTGNSRYEGYSIDLIDEIAKMLNFKFEFRMSPDGKYGALNKVTQT 481
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 482 WDGIVRQL 489
>gi|195352062|ref|XP_002042534.1| GM23400 [Drosophila sechellia]
gi|194124403|gb|EDW46446.1| GM23400 [Drosophila sechellia]
Length = 1002
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 335/569 (58%), Gaps = 38/569 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L ++ L PIV + DS K++CN S+G+
Sbjct: 30 IFTSDKDESEIAFRTAVDRAN----ILERNVELVPIVVYANTDDSFIMEKMVCNLISQGV 85
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVNVYPESHLISKG 123
AIFGP + + +II S+C DIPH+ W PN+ IP + +NV+P++ L+S+G
Sbjct: 86 IAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLNVHPDNLLLSQG 144
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
++ I+ W +FT++YET L LQ +L+ P T++QL PD DD+R
Sbjct: 145 LAEIVQSFAWRSFTVVYETDKELQQLQDILQVGE-------PSSNPTTVKQLGPD-DDHR 196
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P LKEIK S+++ ++L C+ D + IL+QA E+ ++G+YQ+ + L ++ H++DF +
Sbjct: 197 PFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVFIPL----LDTHSIDFGE 252
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
ANITTVR+++P++ H++++++ W E GR V VK + L+ DAV+LF
Sbjct: 253 LSGVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQMILLNDAVWLF 312
Query: 304 AAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
+ L LG + L P L C W G I +K+ + + TGRI+ + + G+R+ F
Sbjct: 313 SKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFN-ENGQRSFF 371
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
+L F+E SD + L TW+ GL+ E+ +K +K+ N+T V+S+
Sbjct: 372 TLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRL-------- 423
Query: 423 QGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 424 -GAPFLTLREPQEGEVLTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQ 482
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP DLFSFL
Sbjct: 483 TWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFL 542
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 543 SPFSLDVWIYMGSAYLFISLLLFALARMA 571
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 11/119 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+++ S+++Y A ++SN S YQ+M +AMES+ PSVF K+N EGVERV K K
Sbjct: 659 LAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKGKN 718
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLRVLFQ 669
YAF MEST +EY VE+ CDL+Q+GG LD K YGIAMP S + + S KL L Q
Sbjct: 719 LYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLKLGELGQ 777
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG + G
Sbjct: 614 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGG 673
Query: 814 STRNFFK 820
ST FF+
Sbjct: 674 STMGFFR 680
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 424 GAPFLTLREPQEGEVLTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQT 483
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 484 WDGIVRQL 491
>gi|312383630|gb|EFR28642.1| hypothetical protein AND_03133 [Anopheles darlingi]
Length = 878
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 332/544 (61%), Gaps = 44/544 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P+V++V DS T + +C +EG+ AIFGP SI I+ S+C+ +IPH+ WD
Sbjct: 8 LVPLVKYVSAEDSFKTERKVCELAAEGVTAIFGPSSILTAGIVGSVCKTLEIPHIVTHWD 67
Query: 98 PNKYFIPTNGVH------GVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQ 151
P P G +N+YPE+ ++S+ ++ +I D W +FT+IY+T + L+ L+
Sbjct: 68 PE----PLGGTEPALQAMTINLYPEADVLSRALADLIVDYSWKSFTVIYDTDEGLMRLKD 123
Query: 152 VLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILK 211
+L+ H P +T+RQ+ D D YRPLLK+I++S ESHI+L+ D+ V +L+
Sbjct: 124 ILQ-IHG------PNDAPITVRQIDDDPD-YRPLLKDIQSSGESHIILEIRPDRIVELLR 175
Query: 212 QAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW 271
QAKEV ++ +YQ+YI++ ++AHT+DF++ + +NIT +R+++ + I++ ++ W
Sbjct: 176 QAKEVKMLEEYQSYIITS----LDAHTMDFEELRYSRSNITALRLMDTKSFDIKNAVHDW 231
Query: 272 IYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPL-PTPLSC--ENPSSW 328
E R V E V+ E+AL DAV ++A A++ L + + P+ LSC +N W
Sbjct: 232 EQGEARMKRLFRVSPEHVQTESALYNDAVKIYATAIRELDATEEITPSRLSCGSKNLRQW 291
Query: 329 QHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ-WKVLGTWNTAFGLN 387
GL I N MK T G+TG I D GRR F L+ +E ++ +K + TW+ G+N
Sbjct: 292 PFGLRIVNYMKVKTEHGITGPIIFDDY-GRRTHFHLDIIELSKEEGFKKIATWDPTHGVN 350
Query: 388 HSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNPETGELY-------G 439
++R+ ++ + E ++N+T V S+ G P++M K + GE G
Sbjct: 351 YTRSQGEVYSQIVESLQNKTFIVASRI---------GAPFLMHKEKKEGEFLEGNNRFEG 401
Query: 440 YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITS 499
YS++LI I+ L F Y+ L + YG+ N T KW+GL+ L +++ADLA+CDLTIT
Sbjct: 402 YSLELIDGISKILGFQYRMELVPDGKYGSYNKITKKWDGLVKHLLDRKADLAVCDLTITY 461
Query: 500 ERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFL 559
ERR AVDFTMPFMTLGISILY P ++ DLFSFL PLS DVW+YMATAYLGVS+LLF L
Sbjct: 462 ERRTAVDFTMPFMTLGISILYATPVQQPKDLFSFLSPLSLDVWIYMATAYLGVSVLLFVL 521
Query: 560 ARIS 563
+R++
Sbjct: 522 SRMA 525
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 11/134 (8%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ S+++Y A + SN S YQRM +AMES+RPSVF KSN EG +RV+K K
Sbjct: 611 LAKQSKIKYGAVVGGSTMSFFQTSNFSTYQRMWAAMESARPSVFTKSNDEGRDRVIKGKR 670
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
YAF MEST +EY E+ C+L Q+GGLLDSKGYGIAMP + + + A L++ +G+
Sbjct: 671 LYAFLMESTSLEYMTERYCELTQIGGLLDSKGYGIAMPVNSPY-RTAISGAVLKMQEEGK 729
Query: 672 PYMMKNPETGELYG 685
+ +K E++G
Sbjct: 730 LHQLKTRWWKEMHG 743
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTRLVAGMWWFF LIM+SSYTANLAAFLT RM+ I++ EDLAK +IKYG V G
Sbjct: 566 KAVSTRLVAGMWWFFALIMLSSYTANLAAFLTMERMDATIESAEDLAKQSKIKYGAVVGG 625
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 626 STMSFFQ 632
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 670 GEPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++M K + GE GYS++LI I+ L F Y+ L + YG+ N T K
Sbjct: 378 GAPFLMHKEKKEGEFLEGNNRFEGYSLELIDGISKILGFQYRMELVPDGKYGSYNKITKK 437
Query: 722 WNGLIGELQEQ 732
W+GL+ L ++
Sbjct: 438 WDGLVKHLLDR 448
>gi|116007354|ref|NP_001036373.1| clumsy, isoform B [Drosophila melanogaster]
gi|113195001|gb|ABI31327.1| clumsy, isoform B [Drosophila melanogaster]
Length = 1002
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/569 (38%), Positives = 334/569 (58%), Gaps = 38/569 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L ++ L PIV + DS K++CN S+G+
Sbjct: 30 IFTSDKDESEIAFRTAVDRAN----ILERNVELVPIVVYANTDDSFIMEKMVCNLISQGV 85
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVNVYPESHLISKG 123
AIFGP + + +II S+C DIPH+ W PN+ IP + +NV+P++ L+S+G
Sbjct: 86 IAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLNVHPDNLLLSQG 144
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
++ I+ W +FT++YET L LQ +L+ P T++QL P DD+R
Sbjct: 145 LAEIVQSFAWRSFTVVYETDKELQQLQDILQVGE-------PISNPTTVKQLGPG-DDHR 196
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P LKEIK S+++ ++L C+ D + IL+QA E+ ++G+YQ+ + L ++ H++DF +
Sbjct: 197 PFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVFIPL----LDTHSIDFGE 252
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
ANITTVR+++P++ H++++++ W E GR V VK + L+ DAV+LF
Sbjct: 253 LSGVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQMILLNDAVWLF 312
Query: 304 AAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
+ L LG + L P L C W G I +K+ + + TGRI+ + + G+R+ F
Sbjct: 313 SKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFN-ENGQRSFF 371
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
+L F+E SD + L TW+ GL+ E+ +K +K+ N+T V+S+
Sbjct: 372 TLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRL-------- 423
Query: 423 QGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 424 -GAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQ 482
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP DLFSFL
Sbjct: 483 TWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFL 542
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 543 SPFSLDVWIYMGSAYLFISLLLFALARMA 571
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 11/119 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+++ S+++Y A ++SN S YQ+M +AMES+ PSVF K+N EGVERV K K
Sbjct: 659 LAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKGKN 718
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLRVLFQ 669
YAF MEST +EY VE+ CDL+Q+GG LD K YGIAMP S + + S KL L Q
Sbjct: 719 LYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLKLGELGQ 777
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG + G
Sbjct: 614 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGG 673
Query: 814 STRNFFK 820
ST FF+
Sbjct: 674 STMGFFR 680
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 424 GAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQT 483
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 484 WDGIVRQL 491
>gi|194760902|ref|XP_001962671.1| GF14315 [Drosophila ananassae]
gi|190616368|gb|EDV31892.1| GF14315 [Drosophila ananassae]
Length = 1018
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 328/569 (57%), Gaps = 40/569 (7%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L DI L PIV + DS K++CN S+G
Sbjct: 32 IFTSDKDESEIAFRTAVHRAN----ILERDIELVPIVMYANTDDSFRMEKIVCNLISQGA 87
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVNVYPESHLISKG 123
AIFGP + NII S+C DIPH+ W PN+ IP + +NV+P++ L+S+G
Sbjct: 88 IAIFGPST--GSNIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLNVHPDNLLLSRG 144
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
+ I+ W TFT+ YE+ L LQ +L+ P T++QL D D+R
Sbjct: 145 FAEIVQSFGWRTFTVAYESDKELQQLQDILQIGE-------PTSFPTTVKQLGTD-GDHR 196
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P LKEIK S+++ ++L CS + + IL+QA E+ ++G+YQ+ + + ++ HT+DF +
Sbjct: 197 PFLKEIKLSTDNCLILHCSPENLLGILQQANELKMLGEYQSIFIPM----LDTHTIDFGE 252
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
ANITT+R+++PT+ H++++++ W E + GR +V VK + L+ DAV+LF
Sbjct: 253 LSGVEANITTIRLMDPTDFHVKNVVHDWEEREKQDGRYYHVEPHRVKTQMILLNDAVWLF 312
Query: 304 AAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
+ L LG + L P L C W G I +K+ + + TGRI+ + + G+R+ F
Sbjct: 313 SKGLTELGILEELEAPQLECRRKKPWSFGRRIIEFIKARSEETATGRIDFN-EYGQRSFF 371
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
+L F+E S + L TW+ GL+ E+ +K K+ N+T V+S+
Sbjct: 372 TLRFMELNSGGFTDLATWDPVNGLDVLNDDEESEKRVGLKLSNKTFIVSSRI-------- 423
Query: 423 QGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G P++ ++ P GE+ GYS+DLI IA LNF Y+F + + YG LN T
Sbjct: 424 -GAPFLTLREPNEGEILQGNARYEGYSIDLIDAIAKMLNFKYEFRMSPDGKYGALNKATQ 482
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP DLFSFL
Sbjct: 483 TWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFL 542
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 543 SPFSLDVWIYMGSAYLFISLLLFALARMA 571
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+S GS L + ++SN S YQ+M +AMES+ PSVF K+N EGVERV K K YAFFMEST
Sbjct: 670 MSGGSTLGF-FRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKGKNLYAFFMESTT 728
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLRVLFQ 669
+EY VE+ CDL+Q+GG LD K YGIAMP S + + S KL L Q
Sbjct: 729 LEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISGAVLKLGELGQ 777
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG + G
Sbjct: 614 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQGNTINSAEDLAAQSKIKYGVMSGG 673
Query: 814 STRNFFK 820
ST FF+
Sbjct: 674 STLGFFR 680
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ P GE+ GYS+DLI IA LNF Y+F + + YG LN T
Sbjct: 424 GAPFLTLREPNEGEILQGNARYEGYSIDLIDAIAKMLNFKYEFRMSPDGKYGALNKATQT 483
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 484 WDGIVRQL 491
>gi|195434838|ref|XP_002065409.1| GK15433 [Drosophila willistoni]
gi|194161494|gb|EDW76395.1| GK15433 [Drosophila willistoni]
Length = 1004
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 326/571 (57%), Gaps = 42/571 (7%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L I L P+V + DS K +CN S+G+
Sbjct: 5 IFTSDKDEAEIAFRTAVDRAN----ILERHIELVPVVIYANTDDSFIMEKTVCNLISQGV 60
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH-GVNVYPESHLISKGI 124
AIFGP + +II S+C DIPH W PN+ +N++P++ L+S+G
Sbjct: 61 IAIFGPSTGGGTDIIASICDTLDIPHFIYDWLPNESLPDREHTSMTLNIHPDNLLLSQGF 120
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPS---VTIRQLPPDTDD 181
+ I+ W +FTIIYE+ L LQ +L R G PS TI+QL PD +D
Sbjct: 121 AEIVQSFGWRSFTIIYESDKELQQLQDIL----------RLGEPSKNPTTIKQLGPD-ED 169
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YRP LKEIK S+++ ++L C+ + IL+QA E+ ++G+YQ+ + + ++ HT++F
Sbjct: 170 YRPFLKEIKLSTDNCLILHCAPENLFNILQQANELKMLGEYQSVFIPV----LDTHTMEF 225
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVY 301
+ ANITTVR+I+PT+ HI+++++ W E GR V VK + L+ DAV+
Sbjct: 226 GELSGVEANITTVRLIDPTDFHIKNVVHDWEEHEKREGRYYKVEPHQVKTQMILLNDAVW 285
Query: 302 LFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRN 360
LF+ L LG + L P + C W G I MK+ + + TGRI+ + + G+R+
Sbjct: 286 LFSKGLTELGIIEELKAPEIECRRKKPWPQGRRIIEFMKARSDEVATGRIDFN-ENGQRS 344
Query: 361 SFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRV 420
F+L F+E + + L TW+ GL+ E+ +K +K+ N+T ++S+
Sbjct: 345 YFTLRFMEMNAAGYLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIISSRI------ 398
Query: 421 LFQGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ 472
G P++ M+ P GE+ GYS+DLI IA LNF Y+F L + YG+LN
Sbjct: 399 ---GAPFLTMREPNEGEVLQGNSRYEGYSMDLIDAIAKMLNFKYEFRLSPDGKYGSLNKA 455
Query: 473 TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFS 532
T W+G++ +L + ADL ICDLT+TS RR AVDFT PFM LGISIL+ KP DLFS
Sbjct: 456 TQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMNLGISILFSKPPVPPTDLFS 515
Query: 533 FLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FL P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 516 FLSPFSLDVWIYMGSAYLFISLLLFALARMA 546
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 15/123 (12%)
Query: 548 AYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVV 607
A LG S + FF ++SN S YQ+M +AMES+RPSVF K+N EGVERV
Sbjct: 644 ALLGGSTMGFF--------------RDSNFSTYQKMWTAMESARPSVFTKTNDEGVERVQ 689
Query: 608 KEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLRV 666
K K YAF MEST +EY +E+ CDLMQ+GG LD K YGIAMP S + + S KL
Sbjct: 690 KGKNLYAFMMESTTLEYNIERKCDLMQIGGWLDYKSYGIAMPFNSPYRKQISGAVLKLGE 749
Query: 667 LFQ 669
L Q
Sbjct: 750 LGQ 752
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I N E+LA +IKYG + G
Sbjct: 589 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQASSINNAEELATQNKIKYGALLGG 648
Query: 814 STRNFFK 820
ST FF+
Sbjct: 649 STMGFFR 655
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ M+ P GE+ GYS+DLI IA LNF Y+F L + YG+LN T
Sbjct: 399 GAPFLTMREPNEGEVLQGNSRYEGYSMDLIDAIAKMLNFKYEFRLSPDGKYGSLNKATQT 458
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 459 WDGIVRQL 466
>gi|195385433|ref|XP_002051410.1| GJ12409 [Drosophila virilis]
gi|194147867|gb|EDW63565.1| GJ12409 [Drosophila virilis]
Length = 990
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 327/567 (57%), Gaps = 35/567 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L +I L PIV + DS K +CN S+G+
Sbjct: 5 IFTSDKDEAEIAFRTAVDRAN----ILERNIELVPIVVYANTEDSFIMEKTVCNLISQGV 60
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
AIFGP S NII S+C DIPH+ W P+ + + +NV+P++ L+++ +
Sbjct: 61 IAIFGPSS--GGNIIASICHTLDIPHIVYDWQPHNQQYELSSMT-LNVHPDNLLLARAFA 117
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPL 185
I+ W ++TIIYE+ L LQ VL+ P TIRQL PD DD+RP
Sbjct: 118 EIVQSFGWRSYTIIYESEKELQQLQDVLQIGD-------PSSNPTTIRQLGPD-DDHRPF 169
Query: 186 LKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQ 245
LKEIK S+++ ++L C + + IL+QA E+ ++G+YQ I S+ ++ HT++ D
Sbjct: 170 LKEIKLSTDNCLILHCGPENLLRILEQANELKMLGEYQARI-SVFIPLLDTHTLELGDIM 228
Query: 246 PGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAA 305
ANITTVR+++PT+ HI+++++ W E GR V VK + L+ DAV+LF+
Sbjct: 229 NVEANITTVRLMDPTDYHIKNVVHDWEEREKREGRYFKVLPTQVKTQMILVNDAVWLFSK 288
Query: 306 ALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
L LG + L P + C+ W HG I MK+ + + TGRI+ + + G+R+ FSL
Sbjct: 289 GLTELGIMEELTAPEIECKRKKPWPHGRRIIEFMKARSEEVATGRIDFN-EYGQRSFFSL 347
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
F+E + + L TW+ GL+ E+ +K +K+ N+T ++S+ G
Sbjct: 348 RFMEIDAGGFLDLATWDPVNGLDMLNDDEESEKRVGQKLSNKTFIISSRI---------G 398
Query: 425 EPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
P++ M+ P GE+ GYS+DLI IA LNF Y+F + + YG+LN T W
Sbjct: 399 APFLTMREPGEGEILLGNARYEGYSMDLIDNIARMLNFKYEFRMSPDGKYGSLNKATQTW 458
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEP 536
+G++ +L + ADL ICDLT+TS RR AVDFT PFM LGISIL+ KP DLFSFL P
Sbjct: 459 DGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMNLGISILFSKPPIPPTDLFSFLSP 518
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARIS 563
S DVW+YM +AYL +SLLLF LAR++
Sbjct: 519 FSLDVWIYMGSAYLFISLLLFALARMA 545
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM +AMES+RPSVF K+N EGVERV K K +YAF MEST +EY VE+ CDL
Sbjct: 654 RDSNFSTYQRMWTAMESARPSVFTKTNDEGVERVQKGKNRYAFLMESTTLEYNVERKCDL 713
Query: 633 MQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKL 664
MQ+GG LD K YGIAMP S + + S KL
Sbjct: 714 MQIGGWLDYKSYGIAMPFNSPYRKQISGAVLKL 746
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I N EDLA +IKYG + G
Sbjct: 588 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQASSISNAEDLAAQNKIKYGALLGG 647
Query: 814 STRNFFK 820
ST FF+
Sbjct: 648 STMGFFR 654
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ M+ P GE+ GYS+DLI IA LNF Y+F + + YG+LN T
Sbjct: 398 GAPFLTMREPGEGEILLGNARYEGYSMDLIDNIARMLNFKYEFRMSPDGKYGSLNKATQT 457
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 458 WDGIVRQL 465
>gi|195030671|ref|XP_001988191.1| GH10703 [Drosophila grimshawi]
gi|193904191|gb|EDW03058.1| GH10703 [Drosophila grimshawi]
Length = 1000
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 329/567 (58%), Gaps = 36/567 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L +I L P+V + DS K++CN S+G+
Sbjct: 17 IFTSDKDEAEIAFRTAVDRAN----ILERNIELVPVVVYANTDDSFIMEKMVCNLISQGV 72
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
AIFGP + + +II S+C DIP++ W P+ Y + +NV+P+ +++G +
Sbjct: 73 IAIFGPSTGGSSDIISSICHTLDIPNIVYDWRPD-YRHYEHSTMTLNVHPDHLQLARGFA 131
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPL 185
I+ W ++T++YE+ L LQ +L+ P TIRQL PD DD+RP
Sbjct: 132 EIVQSFGWRSYTVVYESEKELRQLQDILQIGD-------PSSNPTTIRQLGPD-DDHRPF 183
Query: 186 LKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQ 245
LKEIK S+++ ++L CS +K + IL+QA E+ ++G+YQ+ + L ++ HT++ D
Sbjct: 184 LKEIKLSTDNCLILHCSPEKLMGILEQANELKMLGEYQSVFIPL----LDTHTLELGDIV 239
Query: 246 PGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAA 305
ANITTVR+++PT+ H++++++ W E GR V VK + L+ DAV+LF+
Sbjct: 240 NVEANITTVRIMDPTDYHVKNVVHDWEEREKREGRYYKVLPTQVKTQMILLNDAVWLFSK 299
Query: 306 ALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
L LG + L P + C+ W HG I MK+ + + TGRI+ + + G+R+ FSL
Sbjct: 300 GLTELGIVEELTAPEIECKRKKPWPHGRRIIEFMKARSEEVATGRIDFN-EYGQRSYFSL 358
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
F+E + + L W+ GL+ E+ +K +K+ N+T V+S+ G
Sbjct: 359 RFMEIEAGGFLDLAIWDPVNGLDMLNDDEESEKRVGQKLSNKTFIVSSRI---------G 409
Query: 425 EPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
P++ M+ PE G++ GYS+DLI IA LNF Y+F + + YG+LN T W
Sbjct: 410 APFLTMREPEEGQVLQGNARYEGYSMDLIDNIARMLNFKYEFRMSPDGKYGSLNTATQTW 469
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEP 536
+G++ +L + ADL ICDLT+TS RR AVDFT PFM LGISIL+ KP DLFSFL P
Sbjct: 470 DGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMNLGISILFSKPPIPPTDLFSFLSP 529
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARIS 563
S DVW+YM +AYL +S LLF LAR++
Sbjct: 530 FSLDVWIYMGSAYLFISFLLFALARMA 556
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 11/114 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+S+ S+++Y A ++SN S YQRM +AMES+ PSVF K+N EGVERV K K
Sbjct: 644 LSAQSKIKYGALLGGSTLGFFRDSNFSTYQRMWTAMESATPSVFTKTNDEGVERVQKGKN 703
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKL 664
YAF MEST +EY VE+ CDLMQ+GG LD K YGIAMP S + + S KL
Sbjct: 704 LYAFLMESTTLEYNVERKCDLMQIGGWLDYKSYGIAMPFNSPYRKQISGAVLKL 757
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I N EDL+ +IKYG + G
Sbjct: 599 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQASSINNAEDLSAQSKIKYGALLGG 658
Query: 814 STRNFFK 820
ST FF+
Sbjct: 659 STLGFFR 665
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ M+ PE G++ GYS+DLI IA LNF Y+F + + YG+LN T
Sbjct: 409 GAPFLTMREPEEGQVLQGNARYEGYSMDLIDNIARMLNFKYEFRMSPDGKYGSLNTATQT 468
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 469 WDGIVRQL 476
>gi|195116398|ref|XP_002002742.1| GI11269 [Drosophila mojavensis]
gi|193913317|gb|EDW12184.1| GI11269 [Drosophila mojavensis]
Length = 1011
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/568 (38%), Positives = 327/568 (57%), Gaps = 38/568 (6%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF +++E AF AV R N L +I L P+V + DS K +C S+G
Sbjct: 28 IFTSDKDEAEIAFRTAVDRAN----ILERNIELVPVVLYANTEDSFIMEKTVCELISQGC 83
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP-NKYFIPTNGVHGVNVYPESHLISKGI 124
AIFGP + + +I+ S+C DIPH+ W P N+ + T+ +N++P++ L++ G
Sbjct: 84 IAIFGPSTGSSSDIVASICHTLDIPHIVYDWLPDNRQYEHTSMT--LNMHPDNLLLASGF 141
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
+ I+ W +FTI+YE+ L LQ +L+ P T+RQL PD DD+RP
Sbjct: 142 AEIVQSFGWRSFTIVYESERELQQLQDILQIGD-------PSSNPTTVRQLSPD-DDHRP 193
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
LKEIK S+++ ++L CS + + +L+QA E+ ++G+YQ+ + L ++ HT++ D
Sbjct: 194 FLKEIKLSTDNCLILHCSPENVLKVLEQAHELKMLGEYQSVFIPL----LDTHTLELGDI 249
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
ANITTVR+++PT+ HIR+I++ W E R V VK + L+ DAV+LF+
Sbjct: 250 MNVEANITTVRLMDPTDYHIRNIVHDWEEHEKREERYYKVLPTQVKTQMILLNDAVWLFS 309
Query: 305 AALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFS 363
L L L P + C+ WQHG I MK+ + + TGR++ + + G+R+ F+
Sbjct: 310 KGLSELQILDELSAPEIECKRKKPWQHGRRIIEFMKARSEEIGTGRVDFN-EYGQRSFFT 368
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
L F+E + + L TW+ GL+ E+ +K +K+ N+T V+S+
Sbjct: 369 LRFMEIDAGGFLDLATWDPVNGLDRLNDDEESEKRVGQKLSNKTFIVSSRI--------- 419
Query: 424 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
G P++ ++ PE GE+ GYS+DLI IA LNF Y+F + + YG+ N T
Sbjct: 420 GAPFLTLREPEEGEILQGNARYEGYSIDLIDNIARMLNFKYEFRMSPDGKYGSYNKVTQT 479
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
W+G++ +L + ADL ICDLT+TS RR AVDFT PFM LGISIL+ KP DLFSFL
Sbjct: 480 WDGIVKQLLDGNADLGICDLTMTSSRRQAVDFTPPFMNLGISILFSKPPIPPTDLFSFLS 539
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 540 PFSLDVWIYMGSAYLFISLLLFALARMA 567
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 11/114 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+++ ++++Y A ++SN S+YQ+M +AMES++PSVF K+N EGVERV K K
Sbjct: 655 LAAQTKIKYGALQGGSTMGFFRDSNFSIYQKMWTAMESAQPSVFTKTNDEGVERVQKGKN 714
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKL 664
YAF MEST +EY VE+ CDLMQ+GG LD K YGIAMP S + + S KL
Sbjct: 715 MYAFLMESTTLEYNVERKCDLMQIGGWLDYKSYGIAMPFNSPYRKQISGAVLKL 768
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG ++ G
Sbjct: 610 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQASSINSAEDLAAQTKIKYGALQGG 669
Query: 814 STRNFFK 820
ST FF+
Sbjct: 670 STMGFFR 676
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ PE GE+ GYS+DLI IA LNF Y+F + + YG+ N T
Sbjct: 420 GAPFLTLREPEEGEILQGNARYEGYSIDLIDNIARMLNFKYEFRMSPDGKYGSYNKVTQT 479
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 480 WDGIVKQL 487
>gi|24585613|ref|NP_523610.2| clumsy, isoform A [Drosophila melanogaster]
gi|22946986|gb|AAF53980.2| clumsy, isoform A [Drosophila melanogaster]
Length = 704
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 312/520 (60%), Gaps = 34/520 (6%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVN 112
K++CN S+G+ AIFGP + + +II S+C DIPH+ W PN+ IP + +N
Sbjct: 3 KMVCNLISQGVIAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLN 61
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI 172
V+P++ L+S+G++ I+ W +FT++YET L LQ +L+ P T+
Sbjct: 62 VHPDNLLLSQGLAEIVQSFAWRSFTVVYETDKELQQLQDILQVGE-------PISNPTTV 114
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
+QL P DD+RP LKEIK S+++ ++L C+ D + IL+QA E+ ++G+YQ+ + L
Sbjct: 115 KQLGPG-DDHRPFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVFIPL--- 170
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
++ H++DF + ANITTVR+++P++ H++++++ W E GR V VK +
Sbjct: 171 -LDTHSIDFGELSGVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQ 229
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
L+ DAV+LF+ L LG + L P L C W G I +K+ + + TGRI+
Sbjct: 230 MILLNDAVWLFSKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRID 289
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + G+R+ F+L F+E SD + L TW+ GL+ E+ +K +K+ N+T V+
Sbjct: 290 FN-ENGQRSFFTLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVS 348
Query: 412 SKTFAKLRVLFQGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERE 463
S+ G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + +
Sbjct: 349 SRL---------GAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPD 399
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG LN T W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP
Sbjct: 400 GKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKP 459
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DLFSFL P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 460 PTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMA 499
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 10/106 (9%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
+++ S+++Y A ++SN S YQ+M +AMES+ PSVF K+N EGVERV K K
Sbjct: 587 LAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKGKN 646
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKF 657
YAF MEST +EY VE+ CDL+Q+GG LD K YGIAMP + LA+
Sbjct: 647 LYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFTPLLARL 692
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STRLV GMWWFF L+M++SYTANLAAFLTN+R I + EDLA +IKYG + G
Sbjct: 542 KAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGG 601
Query: 814 STRNFFK 820
ST FF+
Sbjct: 602 STMGFFR 608
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 352 GAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQT 411
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 412 WDGIVRQL 419
>gi|17946197|gb|AAL49139.1| RE56935p [Drosophila melanogaster]
Length = 510
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 312/520 (60%), Gaps = 34/520 (6%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT--NGVHGVN 112
K++CN S+G+ AIFGP + + +II S+C DIPH+ W PN+ IP + +N
Sbjct: 3 KMVCNLISQGVIAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNES-IPDREHSTMTLN 61
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI 172
V+P++ L+S+G++ I+ W +FT++YET L LQ +L+ P T+
Sbjct: 62 VHPDNLLLSQGLAEIVQSFAWRSFTVVYETDKELQQLQDILQVGE-------PISNPTTV 114
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
+QL P DD+RP LKEIK S+++ ++L C+ D + IL+QA E+ ++G+YQ+ + L
Sbjct: 115 KQLGP-GDDHRPFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVFIPL--- 170
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
++ H++DF + ANITTVR+++P++ H++++++ W E GR V VK +
Sbjct: 171 -LDTHSIDFGELSGVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQ 229
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
L+ DAV+LF+ L LG + L P L C W G I +K+ + + TGRI+
Sbjct: 230 MILLNDAVWLFSKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRID 289
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + G+R+ F+L F+E SD + L TW+ GL+ E+ +K +K+ N+T V+
Sbjct: 290 FN-ENGQRSFFTLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVS 348
Query: 412 SKTFAKLRVLFQGEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERE 463
S+ G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + +
Sbjct: 349 SRL---------GAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPD 399
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG LN T W+G++ +L + ADL ICDLT+TS RR AVDFT PFMTLGISIL+ KP
Sbjct: 400 GKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKP 459
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DLFSFL P S DVW+YM +AYL +SLLLF LAR++
Sbjct: 460 PTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMA 499
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 670 GEPYM-MKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G P++ ++ P+ GE+ GYS+DLI IA LNF ++F + + YG LN T
Sbjct: 352 GAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQT 411
Query: 722 WNGLIGEL 729
W+G++ +L
Sbjct: 412 WDGIVRQL 419
>gi|321479418|gb|EFX90374.1| hypothetical protein DAPPUDRAFT_309661 [Daphnia pulex]
Length = 915
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 325/574 (56%), Gaps = 48/574 (8%)
Query: 17 AFEIAVRRINKDFKALPPDIILE-PI----VQHVENYDSLHTAKLMCNATSEGIAAIFGP 71
A+ A++ + + + LP + P+ V+ + DS +K +C G+AAI GP
Sbjct: 47 AYRYAMKMVQANRQILPRSRLSRVPLGSGNVEFLPPNDSFIASKKVCQMIRFGVAAIIGP 106
Query: 72 QSIENRNIIESMCQMFDIPHVEAFWDPNKYFI---------------PTNGVHGVNVYPE 116
QS + + ++SMCQ IPH++ WDP + +N VN+YP
Sbjct: 107 QSEASADHVQSMCQTMKIPHIQTHWDPKRLTAMDVMKNGDRNNYAGRNSNSPLSVNLYPN 166
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+S+ + +IN W TFT++YE D L+ LQ++L+ + I PG + IRQLP
Sbjct: 167 PASVSRAYADVINGWKWKTFTVLYEDEDGLIRLQELLQLS------ISPGY-KIIIRQLP 219
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCS-MDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
D+DDYRPLLKE+K + E +I+LDCS + + IL+QA++V + Q+Y ++ ++
Sbjct: 220 -DSDDYRPLLKEMKKNGERNIVLDCSQLSRVSEILQQAQQVGMTTLAQSYFITS----LD 274
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
H +D+ ++ G ANI+ +RM++P ++ W E G++LNV +T+ +EAAL
Sbjct: 275 MHILDYDQYKQGGANISGLRMVDPHRRETVDVLGKWNNWELSAGKNLNVTEKTLTLEAAL 334
Query: 296 MYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
+YD V L A AL +G + + P SC+ +W G + N MK+ I+G++G I DS
Sbjct: 335 VYDGVQLLAKALHDMGRSQEVTPKSFSCDGIDTWAQGNNLINFMKTTEIEGLSGTIKFDS 394
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ G R++F L VE D +GTWN+ G + R +E + N+TL VT+
Sbjct: 395 E-GSRSNFHLSIVELQPDGLTEVGTWNSIEGPDFFRLRSDGQSLIQESLFNKTLVVTT-- 451
Query: 415 FAKLRVLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ +MMK + G+ D+I I+ L F Y F L ++ +G+L
Sbjct: 452 ------ILSNPYFMMKESDQILVGNDRFEGFVFDIIDEISQMLGFNYIFKLVDDSNWGSL 505
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
N TG+WNG+I EL + +ADLAI DL+I +R +AVDFTMPF+ GISILY+KP KK P+
Sbjct: 506 NKITGEWNGMIRELLDGKADLAIADLSINYDRESAVDFTMPFLNTGISILYKKPQKKPPN 565
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSFL PLS +VW+YM TAYL VSL ++ ++RI+
Sbjct: 566 LFSFLSPLSVEVWIYMCTAYLAVSLSIYAMSRIT 599
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS L + + S + QRM + ME++RPSVFVKS KEGVERV + G+YAFFMEST
Sbjct: 699 VGSGSTLDF-FRYSTLPTQQRMWTFMETTRPSVFVKSTKEGVERVQRSNGQYAFFMESTS 757
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLR 665
IE+ E+ CDL Q+G +DSKGYGIAM P S F A S K++
Sbjct: 758 IEFFTERRCDLTQIGFPMDSKGYGIAMRPGSPFRAVLSQAVLKMQ 802
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A STR+VAG+WWFFTLIMISSYTANLAAFLT RM+ PI + EDLAK +IKYG V G
Sbjct: 643 RATSTRMVAGLWWFFTLIMISSYTANLAAFLTVERMDSPISSAEDLAKQTKIKYGSVGSG 702
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 703 STLDFFR 709
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ------VDTFIL 738
G+ D+I I+ L F Y F L ++ +G+LN TG+WNG+I EL + D I
Sbjct: 475 GFVFDIIDEISQMLGFNYIFKLVDDSNWGSLNKITGEWNGMIRELLDGKADLAIADLSIN 534
Query: 739 FFIYSILFFIYTFVNEAVS 757
+ S + F F+N +S
Sbjct: 535 YDRESAVDFTMPFLNTGIS 553
>gi|242021674|ref|XP_002431269.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
gi|212516523|gb|EEB18531.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
Length = 893
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 323/570 (56%), Gaps = 35/570 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+++ G+F + AF AV ++ L ++ EP + V ++S ++++C+
Sbjct: 21 IRLGGLFHVRDNVQELAFINAVEHSSRG--VLSKRLVAEP--RKVPEHNSFQVSQIVCDL 76
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+A IFGP S E ++S+C +IP VE W+P + N + +N+YP +
Sbjct: 77 LSIGVAGIFGPNSPETSVHVQSICDAKEIPQVEIKWNPYQ----KNKLRSLNIYPHPSSL 132
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ + I+ W FTI+Y++ L+ ++L+ + D KE ++++QL D +
Sbjct: 133 SRALVDIVKAWKWKIFTIVYQSELELIQFSELLKLS--DSKEY-----IISVKQLI-DGE 184
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+YR L+EIKNS ++I+LDC +D +LKQA++V LM ++I++ ++ HT+D
Sbjct: 185 NYRDTLREIKNSGSNNIILDCPIDVLPEVLKQAQQVGLMVAEYSFIITN----LDLHTID 240
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+ Q G NIT MI+P NP + + W E + R L V TV+++AALM DAV
Sbjct: 241 LEFLQYGGTNITGFSMIDPQNPLVIDTVKAWTGREAKNERVLQVTPSTVRLDAALMNDAV 300
Query: 301 YLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA A + L + + P C + ++W G + N MK I GMTG + + + G R
Sbjct: 301 WLFAKATRELHYAQNITMIPQDCNSKNTWVLGSSLNNYMKHTEIKGMTGLVKIHREEGLR 360
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F+L E ++ +G WNT GLN +R+ KE E ++ +KTF +
Sbjct: 361 MDFTLHLNELTTNGLTQVGVWNTTQGLNLTRSYSSFSKEVDED------SLVNKTF--IV 412
Query: 420 VLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
++ PY M ++ +L G + VDLI ++ L F Y F ++ +N G+LN +T
Sbjct: 413 IIAMSPPYAMLKEDSRQLSGNDRFEGFGVDLIHELSLMLGFNYTFTVQYDNDNGSLNKKT 472
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
KW+G++ E+ E+RADLAI DLTIT +R AVDFTMPFMTLGI+ILY+KP + P LFSF
Sbjct: 473 KKWSGMMKEIMEERADLAITDLTITHDREGAVDFTMPFMTLGITILYKKPTAQPPSLFSF 532
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L P S +VW+YM AYLGVSL F +AR+S
Sbjct: 533 LSPFSNEVWMYMLAAYLGVSLTFFAMARLS 562
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN + Y++M M+S+ P VF SN EG++RV+ E YA+ MEST IEY E+NCD+
Sbjct: 672 QDSNYATYKKMWKYMQSN-PDVFTSSNNEGLQRVLNEN--YAYLMESTSIEYLAERNCDI 728
Query: 633 MQVGGLLDSKGYGIAM 648
Q+GGLLDSKGYGIAM
Sbjct: 729 TQIGGLLDSKGYGIAM 744
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
+VSTR+VAG+WWFFTLIM+SSYTANLAAFLT P +NVE+LA IKYG + GS
Sbjct: 607 SVSTRMVAGIWWFFTLIMVSSYTANLAAFLTIESTTSPFRNVEELANQKVIKYGAKKGGS 666
Query: 815 TRNFFK 820
T +FF+
Sbjct: 667 TASFFQ 672
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M ++ +L G + VDLI ++ L F Y F ++ +N G+LN +T KW+G+
Sbjct: 419 PYAMLKEDSRQLSGNDRFEGFGVDLIHELSLMLGFNYTFTVQYDNDNGSLNKKTKKWSGM 478
Query: 726 IGELQEQ 732
+ E+ E+
Sbjct: 479 MKEIMEE 485
>gi|391325355|ref|XP_003737204.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Metaseiulus occidentalis]
Length = 918
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 226/593 (38%), Positives = 319/593 (53%), Gaps = 57/593 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALP-------PDIILEPIVQHVENYDSLHT 53
+KI G+ E+ V AF AV RIN A P D +L V+H+E DS
Sbjct: 21 IKIGGLLEAGEDIVEMAFNSAVERINTHGLAEPGERYTPTSDRLLTR-VEHIERSDSFQA 79
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
++ +C EG+AA+FGPQS + + S C+ D+PH+E WD + H +N+
Sbjct: 80 SRKVCTLLEEGVAAVFGPQSTDASFAVRSACETLDVPHIETHWD----YRSRTTNHSLNL 135
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
YP + K I DW F I+YE +D LV LQ++L++A KE R VT+R
Sbjct: 136 YPHPSALGKAYLDFIKYKDWKNFAILYEENDALVRLQEILKDA-TLMKENR-----VTVR 189
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
Q P T+ YR LK+I + +I+LD + T+LK A++V +M +Y NY ++
Sbjct: 190 QFEPGTE-YRKTLKDIGKTGIKNIVLDVPIKSLYTVLKHAQQVDMMSEYHNYFITS---- 244
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE-------RGRSLNVRA 286
++AHT+D +DFQ G NI+ R+I+ ++ I + WI + +S N
Sbjct: 245 LDAHTIDTEDFQYGGTNISAFRLIDFSSKEIDEVARDWIQRRHRFSSKKSSSVQSFNTGD 304
Query: 287 ETV-KIEAALMYDAVYLFAAALQSLG-ERKPLPT--PLSCENPSSWQHGLGIGNLMKSIT 342
+ K + ALMYDAV LFA AL+ L + P T PLSCE W G M+ I
Sbjct: 305 QDFYKTKVALMYDAVRLFATALKDLHPDTGPKITVQPLSCEREHKWSQGNAFVKYMRMIN 364
Query: 343 IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEK 402
I G+TG I + + G R L ++ W+ G W G+N + + +E +
Sbjct: 365 IKGLTGNIRFN-KDGHRTDMRLTVLDMAHSGWREAGEWTMLGGINITTNYTRELEEARLS 423
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL--------YGYSVDLIKMIANELNF 454
+ N+TL VT+ + Q PY+M + EL GY +DL+ IA+ +F
Sbjct: 424 LLNKTLVVTT--------ILQ-PPYVMYKEKWRELGLTGNDKYEGYCIDLLDSIASSEHF 474
Query: 455 --TYKFVLER--ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMP 510
K+V+ +++YG + G+WNG+IGEL +ADLA+ DLTIT R AVDFTMP
Sbjct: 475 INNMKYVIREVADHSYGGRDAD-GRWNGMIGELLNGKADLAVADLTITYVREEAVDFTMP 533
Query: 511 FMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FMTLGISILY+K AK P LFSFL+PLS +VW+YM TA+LGVSL LF LAR S
Sbjct: 534 FMTLGISILYKKTAKPPPGLFSFLDPLSLEVWIYMMTAFLGVSLFLFVLARFS 586
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 81/127 (63%), Gaps = 16/127 (12%)
Query: 702 YKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNE------- 754
+ FVL R + Y +NP + N E++D F I++ L+F + +
Sbjct: 578 FLFVLARFSPYEWVNPHPCEGN------PEELDN--QFTIWNTLWFTIGCLMQQGCDVTP 629
Query: 755 -AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR+ AGMWWFFTLIM+SSYTANLAAFLT R+ PI++VEDLAK I+YGC+ G
Sbjct: 630 RALSTRVAAGMWWFFTLIMVSSYTANLAAFLTVERLVSPIESVEDLAKQTTIQYGCLRSG 689
Query: 814 STRNFFK 820
ST++FFK
Sbjct: 690 STQSFFK 696
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K+S Y +M M+S RP+VF +SN++G++RV++ GKYA+ MEST IEY +E+NCDL
Sbjct: 696 KDSQFPTYAKMWHVMQSQRPTVFAESNQKGIDRVLR--GKYAYLMESTSIEYNIERNCDL 753
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+G LLD+KGYGIA P
Sbjct: 754 TQIGSLLDNKGYGIATP 770
>gi|357609906|gb|EHJ66743.1| hypothetical protein KGM_16050 [Danaus plexippus]
Length = 918
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/580 (35%), Positives = 316/580 (54%), Gaps = 56/580 (9%)
Query: 4 VGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
+G+ PN AF A+ R + + + + + +V DS +K C S
Sbjct: 43 IGVILPNNSVTEVAFASALARASMESEQYRYSMK----IVYVPYGDSFAASKAACELLSA 98
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH-----GVNVYPESH 118
G+ AIFGP + +E+ C+ +PH++A W P G+ +N++PES
Sbjct: 99 GVIAIFGPTDTTSAAAVEARCRSAGVPHIQALWRPPH----VRGLERLSPPSINLHPESV 154
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+SK +++ I D DW+T+T++Y+ L+ LQ++L+NA +PG + R+L P
Sbjct: 155 ALSKAVAIFIKDSDWNTYTLLYDDDQGLIRLQEILKNA-------QPGHKWLA-RRLRPG 206
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
D+ RPLLK +K E+ +++DC ++ + L+QA EV DY +YIL ++AHT
Sbjct: 207 EDN-RPLLKLLKAYGETRVIIDCPANRVLEYLRQAHEVKFFEDYMSYILMS----LDAHT 261
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN-----VRAETVKIEA 293
+D Q+ + G +N+T +R+ + ++ +S + W + R+ N + + IEA
Sbjct: 262 LDLQELRYGLSNVTCLRIFDHSDGRTKSYLADW------KARTSNDIKMPKKTHEITIEA 315
Query: 294 ALMYDAVYLFAAALQSLGER-KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AL DA L ++++ ++ K + C S W+ G N + + I G+TGR+ +
Sbjct: 316 ALAGDAARLITDSVENAPKQFKIAAQSIECNTKSKWEDGETFTNHLLTNPIQGITGRVQV 375
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D+ TG R +F++E +E + + + WN G +++RT ++ EK +N+T V S
Sbjct: 376 DNITGERTNFNVEVMELSNSGFNSIAKWNAKTGFDYARTATEVSDLLAEKWQNKTFKVVS 435
Query: 413 KTFAKLRVLFQGEPYMM-KNPETGELY-------GYSVDLIKMIANE-LNFTYKFVLERE 463
+ G PY++ K P GE+ GYS DLI I E L+ Y +
Sbjct: 436 RI---------GAPYLVEKTPAEGEVLVGNDRYEGYSKDLIHEILKETLHLNYVIEIVPG 486
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
N YG N T KWNGLIG L E++ADLAICDLTIT ERRA VDFT PFM+LGISILY K
Sbjct: 487 NEYGKYNKDTKKWNGLIGHLLERKADLAICDLTITYERRAFVDFTTPFMSLGISILYSKA 546
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P+LFSFL+P S DVW+YMA AYL VSLLL LAR +
Sbjct: 547 TPPEPELFSFLKPFSVDVWIYMAAAYLMVSLLLHILARFA 586
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 79/107 (73%), Gaps = 5/107 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SNVS YQRM +AME++RPSVFVK+N EGVERVVK K YAF MEST IEY++E+NC+L
Sbjct: 696 KRSNVSTYQRMWTAMEAARPSVFVKNNDEGVERVVKSKRGYAFLMESTAIEYQLERNCNL 755
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGF--AKLRVLFQGEPYMMKN 677
MQVG LDSKGYGIAMP FL+ + A L++ G+ +KN
Sbjct: 756 MQVGNELDSKGYGIAMP---FLSSYRTAVDNALLKLAEGGKLLELKN 799
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 757 STRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTR 816
STR V GMWWFF LIM SSYTANLAAFLTN M+ IKNVEDLA +IKYG V+ GST
Sbjct: 633 STRWVCGMWWFFALIMCSSYTANLAAFLTNAAMDDSIKNVEDLALQTKIKYGTVDGGSTY 692
Query: 817 NFFK 820
+FFK
Sbjct: 693 SFFK 696
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 670 GEPYMM-KNPETGELY-------GYSVDLIKMIANE-LNFTYKFVLERENTYGTLNPQTG 720
G PY++ K P GE+ GYS DLI I E L+ Y + N YG N T
Sbjct: 438 GAPYLVEKTPAEGEVLVGNDRYEGYSKDLIHEILKETLHLNYVIEIVPGNEYGKYNKDTK 497
Query: 721 KWNGLIGELQEQ 732
KWNGLIG L E+
Sbjct: 498 KWNGLIGHLLER 509
>gi|91077712|ref|XP_974933.1| PREDICTED: similar to glutamate receptor, ionotropic kainate 1, 2,
3 (glur5, glur6, glur7) [Tribolium castaneum]
Length = 903
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 312/556 (56%), Gaps = 57/556 (10%)
Query: 35 DIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEA 94
+ +L P + ++ + + L C+A EGIAAIFGP++ E II+SM +IP +
Sbjct: 59 NFVLAPRIYRIKKSEIYNVGNLACDALREGIAAIFGPENGEANEIIQSMALSLEIPQFQT 118
Query: 95 FWDPNKYFIPTNG--------VHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNL 146
FW+PN F G + N+YP ++SK + ++ + DW ++TIIYE D L
Sbjct: 119 FWNPN--FATYAGLGTANKKEIFNFNLYPSPSVLSKAFATLVRENDWRSYTIIYENDDGL 176
Query: 147 VYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
V LQ+VL K + P P VT R+L P+ D +RP+ KEI S HI+LDC D T
Sbjct: 177 VRLQEVL-------KALSPNNPLVTYRKLGPEPD-HRPVFKEIVASGALHIILDCEADHT 228
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
+ IL QAKEV L +Y Y+L+ ++A+T+DF+ N++ VRM++ + +
Sbjct: 229 IDILSQAKEVKLFEEYHTYLLTS----LDAYTIDFRQLGEIKTNVSIVRMLD--QKVVDT 282
Query: 267 IMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENP 325
++ W ++ER L + + +K++ A ++DA+ LF A +L + + + P SC+
Sbjct: 283 VIGNWELVDSER--KLKIPNKLIKVKTAFLFDALNLFITAYSNLDQEQEMDVRPQSCDTN 340
Query: 326 SSWQHGLGIG------NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGT 379
HG + N+ K + + ++G +N +S G+R S LE +E D+++V G
Sbjct: 341 EISSHGYRLSAFIPLLNMTKGMLGEPISGSLNFNS-LGQRVSLKLEVLELRKDEFRVTGI 399
Query: 380 WNTAFGLNHS--RTVEQMDKEKK--EKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE-- 433
W++ G HS T+ D+EK+ ++++ RT V S+ + PY+ + P
Sbjct: 400 WDS--GTPHSIYSTITSADREKELEQQLKGRTFRVVSRIYP---------PYLSRKPGID 448
Query: 434 ------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
GY++DL+K I Y F L +N YG +P+T +WNGLI L +++
Sbjct: 449 SSVMSGNNAFEGYAMDLMKGICELYECNYVFELVPDNNYGKYDPKTKEWNGLIRHLLDRK 508
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLAICDLT T ERR AVDF+ PFMTLGISILY K K+ PDL +F PLS VW+YM T
Sbjct: 509 ADLAICDLTTTYERRKAVDFSNPFMTLGISILYTKIVKEPPDLLAFTNPLSLHVWLYMVT 568
Query: 548 AYLGVSLLLFFLARIS 563
AY+ +S+++F +AR++
Sbjct: 569 AYMVISMIIFLVARLN 584
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 66/79 (83%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+++NV+ Y +M AME++ PSVF SN +GV+RV+ +KGKYAF MES+ IEYEVEK+C+L
Sbjct: 694 RDTNVTTYHKMWVAMETADPSVFETSNDDGVKRVISKKGKYAFLMESSSIEYEVEKHCEL 753
Query: 633 MQVGGLLDSKGYGIAMPTS 651
+QVG LD+KGYGIAMPT+
Sbjct: 754 VQVGNRLDTKGYGIAMPTN 772
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ +STR+VAGMWWFFTLIMIS YTANLAAFLT +RM P I++ EDLA +IKYGC++ G
Sbjct: 628 KGISTRMVAGMWWFFTLIMISCYTANLAAFLTQSRMGPTIQSAEDLAAQTKIKYGCLKDG 687
Query: 814 STRNFFK 820
+T +FF+
Sbjct: 688 ATASFFR 694
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
GY++DL+K I Y F L +N YG +P+T +WNGLI L ++
Sbjct: 460 GYAMDLMKGICELYECNYVFELVPDNNYGKYDPKTKEWNGLIRHLLDR 507
>gi|270002209|gb|EEZ98656.1| hypothetical protein TcasGA2_TC001185 [Tribolium castaneum]
Length = 978
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 312/556 (56%), Gaps = 57/556 (10%)
Query: 35 DIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEA 94
+ +L P + ++ + + L C+A EGIAAIFGP++ E II+SM +IP +
Sbjct: 59 NFVLAPRIYRIKKSEIYNVGNLACDALREGIAAIFGPENGEANEIIQSMALSLEIPQFQT 118
Query: 95 FWDPNKYFIPTNG--------VHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNL 146
FW+PN F G + N+YP ++SK + ++ + DW ++TIIYE D L
Sbjct: 119 FWNPN--FATYAGLGTANKKEIFNFNLYPSPSVLSKAFATLVRENDWRSYTIIYENDDGL 176
Query: 147 VYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
V LQ+VL K + P P VT R+L P+ D +RP+ KEI S HI+LDC D T
Sbjct: 177 VRLQEVL-------KALSPNNPLVTYRKLGPEPD-HRPVFKEIVASGALHIILDCEADHT 228
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
+ IL QAKEV L +Y Y+L+ ++A+T+DF+ N++ VRM++ + +
Sbjct: 229 IDILSQAKEVKLFEEYHTYLLTS----LDAYTIDFRQLGEIKTNVSIVRMLD--QKVVDT 282
Query: 267 IMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENP 325
++ W ++ER L + + +K++ A ++DA+ LF A +L + + + P SC+
Sbjct: 283 VIGNWELVDSER--KLKIPNKLIKVKTAFLFDALNLFITAYSNLDQEQEMDVRPQSCDTN 340
Query: 326 SSWQHGLGIG------NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGT 379
HG + N+ K + + ++G +N +S G+R S LE +E D+++V G
Sbjct: 341 EISSHGYRLSAFIPLLNMTKGMLGEPISGSLNFNS-LGQRVSLKLEVLELRKDEFRVTGI 399
Query: 380 WNTAFGLNHS--RTVEQMDKEKK--EKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE-- 433
W++ G HS T+ D+EK+ ++++ RT V S+ + PY+ + P
Sbjct: 400 WDS--GTPHSIYSTITSADREKELEQQLKGRTFRVVSRIYP---------PYLSRKPGID 448
Query: 434 ------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
GY++DL+K I Y F L +N YG +P+T +WNGLI L +++
Sbjct: 449 SSVMSGNNAFEGYAMDLMKGICELYECNYVFELVPDNNYGKYDPKTKEWNGLIRHLLDRK 508
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLAICDLT T ERR AVDF+ PFMTLGISILY K K+ PDL +F PLS VW+YM T
Sbjct: 509 ADLAICDLTTTYERRKAVDFSNPFMTLGISILYTKIVKEPPDLLAFTNPLSLHVWLYMVT 568
Query: 548 AYLGVSLLLFFLARIS 563
AY+ +S+++F +AR++
Sbjct: 569 AYMVISMIIFLVARLN 584
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 66/79 (83%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+++NV+ Y +M AME++ PSVF SN +GV+RV+ +KGKYAF MES+ IEYEVEK+C+L
Sbjct: 694 RDTNVTTYHKMWVAMETADPSVFETSNDDGVKRVISKKGKYAFLMESSSIEYEVEKHCEL 753
Query: 633 MQVGGLLDSKGYGIAMPTS 651
+QVG LD+KGYGIAMPT+
Sbjct: 754 VQVGNRLDTKGYGIAMPTN 772
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ +STR+VAGMWWFFTLIMIS YTANLAAFLT +RM P I++ EDLA +IKYGC++ G
Sbjct: 628 KGISTRMVAGMWWFFTLIMISCYTANLAAFLTQSRMGPTIQSAEDLAAQTKIKYGCLKDG 687
Query: 814 STRNFFK 820
+T +FF+
Sbjct: 688 ATASFFR 694
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
GY++DL+K I Y F L +N YG +P+T +WNGLI L ++
Sbjct: 460 GYAMDLMKGICELYECNYVFELVPDNNYGKYDPKTKEWNGLIRHLLDR 507
>gi|157129695|ref|XP_001655460.1| ionotropic glutamate receptor subunit ia [Aedes aegypti]
gi|108882061|gb|EAT46286.1| AAEL002511-PA, partial [Aedes aegypti]
Length = 905
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/572 (36%), Positives = 322/572 (56%), Gaps = 40/572 (6%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F + ++ AF+ AV +N + A + LE V+ D +K +C G
Sbjct: 6 GLFDGDTDDAMLAFQYAVEAVNNEKLAFS-NYRLEAHPMTVKYGDQFDVSKKLCRLLKSG 64
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+AAIFGP S ++ + S+C + ++PH+E WD + +PT +N++P ++ +
Sbjct: 65 VAAIFGPSSPKSAVHVNSICDVKEMPHIETRWDAHTR-LPT-----INIHPHPTILGRVF 118
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYR 183
++ +W FTIIYE+ L L ++L K P +VT+RQL + ++R
Sbjct: 119 LDLVVAFEWKDFTIIYESGPWLPGLAELL-------KMYDPKGYTVTVRQLDLKLNGNFR 171
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
P+L+ +K S + HI+L CS++ +LKQA++V LM D+ I++ ++ HT++ +
Sbjct: 172 PVLRRVKMSDDKHIILACSIESMPEVLKQAQQVGLMTDHHQIIITS----LDLHTIELEP 227
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETVKIEAALMYDA 299
+Q NIT +RM++P I + ++ ++L+++ T++++ ALMYDA
Sbjct: 228 YQYSGTNITGIRMVDPEEEKIHQVTE--FLNASQISKTLDLKEGLNPATMRVQTALMYDA 285
Query: 300 VYLFAAALQSLGERKP---LPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
V +FA AL+ L P L T L C++ +W GL I N MKS I G+T + D +
Sbjct: 286 VLVFAEALRHLIGIDPPHLLETMSLKCDDDDTWHSGLSIINYMKSSMIHGLTRGVRFDHE 345
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE-KIENRT---LTVT 411
G R+ F L+ VE + +G WN+ GLN +R EQ + ++NRT LT
Sbjct: 346 -GHRSDFLLDIVELGPAGLEKVGVWNSTEGLNFTRKKEQTALAFDDGTLQNRTFIVLTAI 404
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
S + L+ P + + E G+ +DLI ++ L F Y FVL+ + YG+LN
Sbjct: 405 SPPYGMLK----DSPTRLSGNDRFE--GFGIDLIHELSLMLGFNYTFVLQEDGVYGSLNR 458
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+TGKWNG++ EL E RADLAI DLTITS+R +AVDFTMPFM LGISILYRKP K+ P LF
Sbjct: 459 ETGKWNGMVQELLEWRADLAITDLTITSDRESAVDFTMPFMNLGISILYRKPTKEPPSLF 518
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SF+ P S VW+Y+ AY+ VS+ LF L R+S
Sbjct: 519 SFMSPFSKQVWLYLGGAYMMVSMSLFILGRLS 550
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA-GRIKYGCVEM 812
+A STR VA +WWFFTLIM+SSYTANLAAFLT +++ PI N EDLA A G IKYG
Sbjct: 594 KASSTRAVASIWWFFTLIMVSSYTANLAAFLTVEQIHSPISNAEDLAAASGTIKYGAKRD 653
Query: 813 GSTRNFFK 820
GST +FFK
Sbjct: 654 GSTFSFFK 661
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K++ YQ+M+ M S P + SN EG++RV E YAF MEST IEY +E+ CD+
Sbjct: 661 KDAEYKTYQKMYQYM-SDNPDLLTSSNPEGLQRVKTEN--YAFLMESTSIEYIIERECDV 717
Query: 633 MQVGGLLDSKGYGIAM 648
Q+GGLLD KGYGIAM
Sbjct: 718 TQIGGLLDDKGYGIAM 733
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 731
G+ +DLI ++ L F Y FVL+ + YG+LN +TGKWNG++ EL E
Sbjct: 426 GFGIDLIHELSLMLGFNYTFVLQEDGVYGSLNRETGKWNGMVQELLE 472
>gi|347964531|ref|XP_559460.4| AGAP000798-PA [Anopheles gambiae str. PEST]
gi|333467575|gb|EAL41148.4| AGAP000798-PA [Anopheles gambiae str. PEST]
Length = 912
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 209/572 (36%), Positives = 321/572 (56%), Gaps = 41/572 (7%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F E+V AF+ AV +N + K + LE V+ D +K +C G
Sbjct: 4 GLFDGATEDVELAFQYAVEAVNNE-KLSYSNYQLEAQAVQVKYGDQFDASKKLCRLLKTG 62
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+A IFGP S ++ ++S+C ++PH+E WD +PT +N++P H++ +
Sbjct: 63 VAGIFGPSSPKSALHVQSVCDEKEMPHIETRWDAYTK-LPT-----LNLHPHPHIMGRVF 116
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYR 183
++ +W +FT++YE+ L + +L K P + +VT+RQL + +YR
Sbjct: 117 LDLVVAFEWKSFTVLYESGPWLPGIADLL-------KMYDP-KGTVTVRQLDLGLNGNYR 168
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
+L+ +K S + I+L CS+D +L+QA++V L+ D+ I++ ++ HT+D +
Sbjct: 169 AVLRRVKLSEDKRIILACSIDSMPEVLRQAQQVGLLTDHHQIIVTS----LDLHTIDLEP 224
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETVKIEAALMYDA 299
+Q NIT VR+I+P IR + + ++ ++L ++ +++E ALMYDA
Sbjct: 225 YQYSGTNITGVRLIDPEEDKIRQVAD--FLNASQIAKTLELQDGLNPAKMRVETALMYDA 282
Query: 300 VYLFAAALQSLGERKPL----PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
V LFA AL+ L +P P L C++ ++W++G + N MKS TI G+T I D Q
Sbjct: 283 VLLFAEALKHLIGSEPAHLLEPIALRCDDTATWKNGYSVINYMKSSTIHGLTRSIRFDHQ 342
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQ-MDKEKKEKIENRT---LTVT 411
G R+ F L+ +E + +G WN+ GLN +R EQ + ++NRT LT
Sbjct: 343 -GHRSDFLLDIIELGPAGLEKVGVWNSTEGLNFTRKKEQTLLAFDDGTLQNRTFLVLTAI 401
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
S + L+ P + E E G+ +DLI ++ L F Y F+L+ + YG+LN
Sbjct: 402 SPPYGMLK----DSPVKLTGNERFE--GFGIDLIHELSLMLGFNYTFILQEDGVYGSLNR 455
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
T KWNG++ EL E RADLAI DLTITS+R +AVDFTMPFM LGISILYRKP K+ P LF
Sbjct: 456 DTKKWNGMVLELLEWRADLAITDLTITSDRESAVDFTMPFMNLGISILYRKPTKEPPSLF 515
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SF+ P S VW+Y+ AY+ VS+ LF L RIS
Sbjct: 516 SFMSPFSKQVWLYLGGAYMMVSMSLFILGRIS 547
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA-GRIKYGCVEM 812
+A +TR VA +WWFFTLIM+SSYTANLAAFLT ++ PI N EDLA A G IKYG
Sbjct: 591 KAPATRAVASIWWFFTLIMVSSYTANLAAFLTVEQVVSPISNAEDLAAAGGTIKYGAKRD 650
Query: 813 GSTRNFFK 820
GST +FFK
Sbjct: 651 GSTISFFK 658
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 13/96 (13%)
Query: 563 SSGSRLRYSAKNSNVSL----------YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK 612
++G ++Y AK ++ Y +M+ M +++ + SN EG++RV E
Sbjct: 638 AAGGTIKYGAKRDGSTISFFKDAEYGTYAKMYQYMMANQ-ELLTSSNPEGLQRVKTEN-- 694
Query: 613 YAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
YAF MEST IEY VE+ CD+ Q+GGLLD KGYGIAM
Sbjct: 695 YAFLMESTSIEYIVERECDVTQIGGLLDDKGYGIAM 730
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 731
G+ +DLI ++ L F Y F+L+ + YG+LN T KWNG++ EL E
Sbjct: 423 GFGIDLIHELSLMLGFNYTFILQEDGVYGSLNRDTKKWNGMVLELLE 469
>gi|427794721|gb|JAA62812.1| Putative excitatory amino acid transporter, partial [Rhipicephalus
pulchellus]
Length = 903
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 217/584 (37%), Positives = 307/584 (52%), Gaps = 51/584 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALP------PDIILEPIVQHVENYDSLHTA 54
+KI GIF ++ + AF AV RIN P P L V+H E DS +
Sbjct: 14 IKIGGIFETGDDVLEMAFSSAVDRINTMGLGEPGAQFVTPGSRLLARVEHTERLDSFQAS 73
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI-PTNGVHGVNV 113
+ +C EG+AA+FGPQS E + S C + D+PH+E WD Y + P N H VN+
Sbjct: 74 RKVCALLEEGVAAVFGPQSGEASAAVRSACAVLDVPHMETRWD---YRVRPDN--HSVNL 128
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
+P + K I DW TF ++YE +D L+ LQ++L++ +++ V +R
Sbjct: 129 FPHPAALGKAYLDFIKHKDWRTFAVLYEENDALIRLQEILKDPLMRERK-------VVVR 181
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
Q P + YR +LK++ S +I+LD ++ T LK A++V +M +Y NY ++
Sbjct: 182 QFEPGVE-YRKVLKDVGKSGIKNIVLDVPIEHVHTALKHAQQVDMMSEYHNYFITS---- 236
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI---YEENERGRSLNVRAETVK 290
++AHTVD +DFQ G NI+ R+++ + W+ ++G R T K
Sbjct: 237 LDAHTVDMEDFQYGGTNISAFRLVDTNAKEFDEVARDWMTRRLRHGQKGEGNLYRNLTTK 296
Query: 291 IEAALMYDAVYLFAAALQSLGER---KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+ ALMYDAV LFA AL+ L K PLSCE W G M+ I I G+T
Sbjct: 297 V--ALMYDAVRLFATALRDLQPNNGPKIQVRPLSCETEEPWSQGNSFVKYMRMINIQGLT 354
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I + G R L +E + + G W G+N + + +E + + N+T
Sbjct: 355 GNIRFNPN-GHRTDMRLTVMEITHNGLREAGEWTMHGGINITTNYSRQLEEARLHLMNKT 413
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIAN--ELNFTYKFV 459
L VT+ L Q PY M EL G Y +DL++ IA ++N YK
Sbjct: 414 LIVTT--------LVQ-PPYTMLKENHQELEGNAKYEGYCIDLLEEIAKLPDINIKYKIR 464
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ +G + + +WNG+IGEL + +ADLAI DLTIT R VDFTMPFM LGISIL
Sbjct: 465 EVADKAHGRRDDKN-EWNGMIGELLQGKADLAIADLTITYVREEVVDFTMPFMNLGISIL 523
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
Y+K KK P LFSFL PLS +VW+YM+TA+LGVSL LF +AR S
Sbjct: 524 YKKADKKPPWLFSFLAPLSLEVWIYMSTAFLGVSLFLFVVARFS 567
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 80/127 (62%), Gaps = 16/127 (12%)
Query: 702 YKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNE------- 754
+ FV+ R + Y +NP + EL+ + F I++ L+F + +
Sbjct: 559 FLFVVARFSPYEWVNPHPC--DPRPAELENR------FTIWNTLWFTIGCLMQQGCDVTP 610
Query: 755 -AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR+ AGMWWFFTLIM+SSYTANLAAFLT R+ PI++VEDLAK I+YGC++ G
Sbjct: 611 RALSTRVAAGMWWFFTLIMVSSYTANLAAFLTVERLVSPIESVEDLAKQTSIQYGCLQSG 670
Query: 814 STRNFFK 820
ST+ FFK
Sbjct: 671 STQAFFK 677
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S Y++M M+++RPSVF +SN +G+ERV +GKYA+ MEST IEY +E+NCDL
Sbjct: 677 KESEFPTYKKMWHVMQAARPSVFTESNYKGIERV--RRGKYAYLMESTSIEYAIERNCDL 734
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+G LLD+KGYGIA P
Sbjct: 735 TQIGSLLDNKGYGIATP 751
>gi|350407192|ref|XP_003488013.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Bombus
impatiens]
Length = 922
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 318/593 (53%), Gaps = 80/593 (13%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCN 59
+K+ IF +EE AF+ A+ + F+ + P LE I++ VE N DS TA C
Sbjct: 31 IKVGAIFHAGDEEHIAAFQSAIYKTK--FEHVAPAFELEFIIKQVEVNTDSFRTAAAACE 88
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI----PTNGV-HGVNVY 114
EG+AAIFGP S I+ S+ FD+PH++ FW N+ P N +NV+
Sbjct: 89 LLEEGVAAIFGPSSSYTYGIVASIAARFDVPHMDYFWRQNEELQEGQEPKNPTPMTINVF 148
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+S+++SK I+ ++ M W++F +YE +D L +Q+ L D ++TI++
Sbjct: 149 PDSNMVSKAIADVVESMKWNSFAAVYEDNDGLSRIQKALSLKRTKDS-------AITIKK 201
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L D+ RP+LKEI+ S ++++D + +L QA EV L+ DY N++++
Sbjct: 202 LSEGVDN-RPVLKEIRAMSICNVIIDVKPSNIIEVLYQAMEVKLLADYCNFLIT------ 254
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVK---- 290
Y + T + + N +I LN+R V+
Sbjct: 255 -------------YLDSTKLPIWEVRNKTTTNIT------------GLNLRENDVEGINW 289
Query: 291 IEAALMYDAVYLFAAALQSLGERKPL----PTPLSCENPSSWQHGLGIGNLMKSITIDG- 345
+E+A++YDAV++F L++L R P PLSCE + GL I NLM+ ++ +G
Sbjct: 290 VESAILYDAVFMFYNTLETLNARNMSVDIDPLPLSCEGEKKYSAGLDIINLMRELSDEGK 349
Query: 346 ----MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE 401
+TG I +D + GRR SF ++ ++ + G W GL+ ++ ++ ++ +
Sbjct: 350 IEGKLTGPITID-ENGRRQSFQIQIIDVRPGENVQTGYWRPD-GLHSIKSEKERERYLYK 407
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETG---------ELYGYSVDLIKMIANEL 452
IE + +T+K G PY+M+ PE G+ +DLI IA L
Sbjct: 408 SIELKKFKITTKV---------GPPYIMEVPEGSNRGILIDQRRYEGFCIDLIDEIAKLL 458
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
F Y+F L + +YG + +T +WNGLI L + ADLAICDLTIT ER AVDFTMPFM
Sbjct: 459 KFKYEFELVPDGSYGKYDKETKQWNGLIRRLLDHDADLAICDLTITYERENAVDFTMPFM 518
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
LGISILYR P +K+PDLFSFL PLS DVW+YMATA+L VS++LF ARI+ G
Sbjct: 519 NLGISILYRTPEEKEPDLFSFLSPLSLDVWIYMATAFLAVSIMLFVQARIAPG 571
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 72/98 (73%), Gaps = 11/98 (11%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +++RY A ++SN + YQRM + M+ +RPSVF K+N EGVERV+K++
Sbjct: 658 LAKQTKVRYGAVDGGSTSTFFRDSNYTTYQRMWATMQEARPSVFTKTNDEGVERVLKKR- 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY +E+NCDL ++GGL+D+KGYGIA+P
Sbjct: 717 DYAFLMESTTIEYRMERNCDLDKIGGLIDNKGYGIALP 754
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 757 STRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTR 816
S R+VAGMWWFF +IM+SSYTANLAAFLT + PI+ VEDLAK +++YG V+ GST
Sbjct: 616 SIRMVAGMWWFFIMIMVSSYTANLAAFLTYDKKENPIQGVEDLAKQTKVRYGAVDGGSTS 675
Query: 817 NFFK 820
FF+
Sbjct: 676 TFFR 679
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 670 GEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M+ PE G+ +DLI IA L F Y+F L + +YG + +T
Sbjct: 421 GPPYIMEVPEGSNRGILIDQRRYEGFCIDLIDEIAKLLKFKYEFELVPDGSYGKYDKETK 480
Query: 721 KWNGLIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
+WNGLI L + D I + + + F F+N +S
Sbjct: 481 QWNGLIRRLLDHDADLAICDLTITYERENAVDFTMPFMNLGIS 523
>gi|340709446|ref|XP_003393320.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Bombus
terrestris]
Length = 922
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 318/589 (53%), Gaps = 72/589 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCN 59
+KI IF +EE AFE A+ + F+ + P L+ I++ VE N DS TA C
Sbjct: 31 IKIGAIFHAGDEEHIAAFESAIYKTK--FEHVAPAFELKSIIKQVEVNTDSFRTAVAACE 88
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI----PTNGV-HGVNVY 114
EG+AAIFGP S I+ S+ FD+PH++ FW N+ P N +NV+
Sbjct: 89 LLEEGVAAIFGPSSSYTYGIVASIAARFDVPHMDYFWRQNEELQEGQEPKNPTPMTINVF 148
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+S+++SK I+ ++ M W++F +YE +D L +Q+ L + D ++TI++
Sbjct: 149 PDSNMVSKAIADVVESMKWNSFAAVYEDNDGLSRIQKALSLKRNKDS-------AITIKK 201
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L D+ RP+LKEI+ S ++++D + +L QA EV L+ DY N++++
Sbjct: 202 LSEGMDN-RPVLKEIRAMSICNVIIDVKPSNIIDVLYQAMEVKLLADYCNFLIT------ 254
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
Y + T + + N +I + E + G + +E+A
Sbjct: 255 -------------YLDSTKLPIWEVRNKTTTNITGLNLRENDMEGINW--------VESA 293
Query: 295 LMYDAVYLFAAALQSLGERKPL----PTPLSCENPSSWQHGLGIGNLMKSITIDG----- 345
++YDAV++F L++L R P PLSCE + GL I NLM+ ++ +G
Sbjct: 294 ILYDAVFMFYNTLETLNARNMSVDIDPLPLSCEGEKKYSAGLDIINLMRELSDEGKVEGK 353
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +D + GRR SF ++ ++ + G W GL+ ++ ++ ++ + IE
Sbjct: 354 LTGPITID-ENGRRQSFQIQIIDVRPGENVQTGYWRPD-GLHSIKSEKERERYLYKSIEL 411
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTY 456
+ +T+K G PY+M+ PE G+ +DLI IA L F Y
Sbjct: 412 KKFKITTKV---------GPPYIMEVPEGSNRGILIDQMRYEGFCIDLIDEIAKLLKFKY 462
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGI 516
+F L + +YG + +T +WNGLI L + ADLAICDLTIT ER AVDFTMPFM LGI
Sbjct: 463 EFELVPDGSYGKYDKETKQWNGLIRRLLDHDADLAICDLTITYERENAVDFTMPFMNLGI 522
Query: 517 SILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
SILYR P +K+PDLFSFL PLS DVW+YMATA+L VS++LF ARI+ G
Sbjct: 523 SILYRTPEEKEPDLFSFLSPLSLDVWIYMATAFLAVSIMLFVQARIAPG 571
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 72/98 (73%), Gaps = 11/98 (11%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ +++RY A ++SN + YQRM + M+ +RPSVF K+N EGVERV+K++
Sbjct: 658 LAKQTKVRYGAVDGGSTSTFFRDSNYTTYQRMWATMQEARPSVFTKTNDEGVERVLKKR- 716
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
YAF MEST IEY +E+NC+L ++GGL+D+KGYGIA+P
Sbjct: 717 DYAFLMESTTIEYRMERNCELDKIGGLIDNKGYGIALP 754
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 757 STRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTR 816
S R+VAGMWWFF +IM+SSYTANLAAFLT + PI+ VEDLAK +++YG V+ GST
Sbjct: 616 SIRMVAGMWWFFIMIMVSSYTANLAAFLTYDKKENPIQGVEDLAKQTKVRYGAVDGGSTS 675
Query: 817 NFFK 820
FF+
Sbjct: 676 TFFR 679
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 670 GEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M+ PE G+ +DLI IA L F Y+F L + +YG + +T
Sbjct: 421 GPPYIMEVPEGSNRGILIDQMRYEGFCIDLIDEIAKLLKFKYEFELVPDGSYGKYDKETK 480
Query: 721 KWNGLIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
+WNGLI L + D I + + + F F+N +S
Sbjct: 481 QWNGLIRRLLDHDADLAICDLTITYERENAVDFTMPFMNLGIS 523
>gi|347968578|ref|XP_003436249.1| AGAP002797-PB [Anopheles gambiae str. PEST]
gi|333467940|gb|EGK96764.1| AGAP002797-PB [Anopheles gambiae str. PEST]
Length = 978
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 319/576 (55%), Gaps = 40/576 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
M+ G+F + ++ AF+ AV +N + K + LE V+ D +K +C
Sbjct: 5 MENRGLFDGDTDDAELAFQYAVEAVNNE-KLSYSNYQLEAQAVQVKYGDQFDVSKKLCRL 63
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+A IFGP ++ ++S+C ++PH+E WD +PT +N++P H++
Sbjct: 64 LKTGVAGIFGPSLPKSALHVQSVCDEKEMPHIETRWDAYTK-LPT-----LNLHPHPHIM 117
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ ++ +W FTI+YE+ L + +L K P +VT+RQL +
Sbjct: 118 GRVFLDLVVAFEWKDFTILYESGPWLPGISDLL-------KMYDPKGYTVTVRQLDLGLN 170
Query: 181 -DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
+YR +L+ +K S + I+L CS++ +LKQA++V L+ D+ I++ ++ HT+
Sbjct: 171 GNYRAVLRRVKLSEDKRIILACSIESMPEVLKQAQQVGLLTDHHQIIITS----LDLHTI 226
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMN----GWIYEENERGRSLNVRAETVKIEAAL 295
D + +Q NIT VR+I+P I+ + + I + E LN ++++ AL
Sbjct: 227 DLEPYQYSGTNITGVRLIDPEEEKIKQVADFLNASQIAKTLELHDGLN--PAKMRVKTAL 284
Query: 296 MYDAVYLFAAALQSL-GERKPL---PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
MYDAV LFA AL+ L G P P L C++P++W++G + N MKS TI G+T I
Sbjct: 285 MYDAVLLFAEALKHLIGSEPPRLLEPISLKCDDPTTWKNGYSVINYMKSSTIHGLTRSIK 344
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE-KIENRT--- 407
D Q G R+ F L+ +E + +G WN+ GLN +R EQ + ++NRT
Sbjct: 345 FDHQ-GHRSDFLLDLIELGPAGLEKVGVWNSTEGLNFTRKTEQAAHAMDDGTLQNRTFLV 403
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
LT S + L+ P + E E G+ +DLI ++ L F Y F+L+ + YG
Sbjct: 404 LTAISPPYGMLK----DSPIKLSGNERFE--GFGIDLIHELSLMLGFNYTFILQEDGVYG 457
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+LN T KWNG++ EL E RADLAI DLTITS+R +AVDFTMPFM LGISIL+RKP K+
Sbjct: 458 SLNRDTKKWNGMVQELLEWRADLAITDLTITSDRESAVDFTMPFMNLGISILFRKPTKEP 517
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P LFSF+ P S VW+Y+ AY+ VS+ LF L RIS
Sbjct: 518 PSLFSFMSPFSKQVWLYLGGAYMMVSMSLFVLGRIS 553
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA-GRIKYGCVEM 812
+A +TR VA +WWFFTLIM+SSYTANLAAFLT ++ PI N EDLA A G +KYG
Sbjct: 597 KAPATRAVASIWWFFTLIMVSSYTANLAAFLTVEQVVSPINNAEDLAAAGGAVKYGAKRD 656
Query: 813 GSTRNFFK 820
GST +FFK
Sbjct: 657 GSTISFFK 664
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 13/96 (13%)
Query: 563 SSGSRLRYSAKNSNVSL----------YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK 612
++G ++Y AK ++ Y +M+ M +++ + SN EG++RV E
Sbjct: 644 AAGGAVKYGAKRDGSTISFFKDAEYGTYAKMYQFMMANQ-DLLTSSNPEGLQRVKTEN-- 700
Query: 613 YAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
YAF MEST IEY VE+ CD+ Q+GGLLD KGYGIAM
Sbjct: 701 YAFLMESTSIEYIVERECDVTQIGGLLDDKGYGIAM 736
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 731
G+ +DLI ++ L F Y F+L+ + YG+LN T KWNG++ EL E
Sbjct: 429 GFGIDLIHELSLMLGFNYTFILQEDGVYGSLNRDTKKWNGMVQELLE 475
>gi|328792543|ref|XP_394264.3| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Apis
mellifera]
Length = 927
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 320/589 (54%), Gaps = 69/589 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCN 59
+KI IF +EE AF+ AV I+ + + P +E ++ VE N DS TA C
Sbjct: 33 IKIGAIFHAGDEEYMDAFKKAV--IDTKSEHIAPSFKVETSIKKVEVNTDSFKTAAAACK 90
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI----PTN-GVHGVNVY 114
EG+AAIFGP S I+ S+ FD+PH++ FW N+ P N +N +
Sbjct: 91 LLEEGVAAIFGPSSPSTYGIVASIAARFDVPHIDYFWRQNEELHADQEPKNPKPMTINFF 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+S ++ K I+ ++ M W TF +Y+ +D L +Q+ L D +VTIR+
Sbjct: 151 PDSEMVGKAIADVVESMKWTTFAAVYQNNDGLSRIQKALSLRRKKDT-------AVTIRR 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L + D+RP+LKEI+ S ++++D + +L QAKEV L+ +Y N++++ Y
Sbjct: 204 LG-EGPDFRPILKEIRAMSICNVIIDVEPRNIIDVLYQAKEVKLLAEYCNFLIT---YLD 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+A ++ + NIT + + N + I W+ E+A
Sbjct: 260 SAKLSLWEVREESTINITGLNLRNEEGNEVEGI--NWV-------------------ESA 298
Query: 295 LMYDAVYLFAAALQSLGERKPL--------PTPLSCENPSSWQHGLGIGNLMKSITIDG- 345
++YD+V+L AL++L R P PLSCE + G I N+++ ++ +G
Sbjct: 299 ILYDSVFLVYNALETLNARNQDNPEGETIDPVPLSCEGEEKYNAGPNITNVIRELSKEGK 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +D + G+R F L+ ++ D+ +G W+ GL+ + ++ + + IE
Sbjct: 359 ITGPITID-ENGQRQFFKLKIIDVRPDESVEIGYWDPD-GLHTADNEKERESYLYKSIEQ 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTY 456
+ +++K G PY+M+ ++ G+ +DLI+ IA LNF Y
Sbjct: 417 KKFKISTKL---------GPPYVMEVTDSATRGILIEQTRYEGFCIDLIEEIAKLLNFKY 467
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGI 516
+F L + YGTLN +T +WNGLI L + ADLAICDLTIT ER +AVDFTMPFM LGI
Sbjct: 468 EFELVPDGNYGTLNKETKQWNGLIRRLLDHDADLAICDLTITYERESAVDFTMPFMNLGI 527
Query: 517 SILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
SILYRKP +K+PDLFSFL PLS DVW+YMATA+L VS++LF AR++ G
Sbjct: 528 SILYRKPEEKEPDLFSFLSPLSTDVWIYMATAFLAVSIMLFLQARMAPG 576
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM +AM+ +RPSVF K+N EGV+RV+K++ YAF MEST IEY +E+NCDL
Sbjct: 684 RDSNYSTYQRMWAAMQEARPSVFTKTNDEGVDRVLKKR-DYAFLMESTTIEYRMERNCDL 742
Query: 633 MQVGGLLDSKGYGIAMP 649
+VGGL+D+KGYGIA+P
Sbjct: 743 DKVGGLIDNKGYGIALP 759
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A S R+VAGMWWFFTLIM+SSYTANLAAFLT +M+ PIK VEDLAK +IKYG V G
Sbjct: 618 KAPSIRMVAGMWWFFTLIMVSSYTANLAAFLTVDKMDNPIKGVEDLAKQTKIKYGAVAGG 677
Query: 814 STRNFFK 820
ST FF+
Sbjct: 678 STSTFFR 684
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 670 GEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M+ ++ G+ +DLI+ IA LNF Y+F L + YGTLN +T
Sbjct: 426 GPPYVMEVTDSATRGILIEQTRYEGFCIDLIEEIAKLLNFKYEFELVPDGNYGTLNKETK 485
Query: 721 KWNGLIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
+WNGLI L + D I + S + F F+N +S
Sbjct: 486 QWNGLIRRLLDHDADLAICDLTITYERESAVDFTMPFMNLGIS 528
>gi|347968576|ref|XP_312117.5| AGAP002797-PA [Anopheles gambiae str. PEST]
gi|333467939|gb|EAA07814.5| AGAP002797-PA [Anopheles gambiae str. PEST]
Length = 928
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 319/576 (55%), Gaps = 40/576 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
M+ G+F + ++ AF+ AV +N + K + LE V+ D +K +C
Sbjct: 5 MENRGLFDGDTDDAELAFQYAVEAVNNE-KLSYSNYQLEAQAVQVKYGDQFDVSKKLCRL 63
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+A IFGP ++ ++S+C ++PH+E WD +PT +N++P H++
Sbjct: 64 LKTGVAGIFGPSLPKSALHVQSVCDEKEMPHIETRWDAYTK-LPT-----LNLHPHPHIM 117
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ ++ +W FTI+YE+ L + +L K P +VT+RQL +
Sbjct: 118 GRVFLDLVVAFEWKDFTILYESGPWLPGISDLL-------KMYDPKGYTVTVRQLDLGLN 170
Query: 181 -DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
+YR +L+ +K S + I+L CS++ +LKQA++V L+ D+ I++ ++ HT+
Sbjct: 171 GNYRAVLRRVKLSEDKRIILACSIESMPEVLKQAQQVGLLTDHHQIIITS----LDLHTI 226
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMN----GWIYEENERGRSLNVRAETVKIEAAL 295
D + +Q NIT VR+I+P I+ + + I + E LN ++++ AL
Sbjct: 227 DLEPYQYSGTNITGVRLIDPEEEKIKQVADFLNASQIAKTLELHDGLN--PAKMRVKTAL 284
Query: 296 MYDAVYLFAAALQSL-GERKPL---PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
MYDAV LFA AL+ L G P P L C++P++W++G + N MKS TI G+T I
Sbjct: 285 MYDAVLLFAEALKHLIGSEPPRLLEPISLKCDDPTTWKNGYSVINYMKSSTIHGLTRSIK 344
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE-KIENRT--- 407
D Q G R+ F L+ +E + +G WN+ GLN +R EQ + ++NRT
Sbjct: 345 FDHQ-GHRSDFLLDLIELGPAGLEKVGVWNSTEGLNFTRKTEQAAHAMDDGTLQNRTFLV 403
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
LT S + L+ P + E E G+ +DLI ++ L F Y F+L+ + YG
Sbjct: 404 LTAISPPYGMLK----DSPIKLSGNERFE--GFGIDLIHELSLMLGFNYTFILQEDGVYG 457
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+LN T KWNG++ EL E RADLAI DLTITS+R +AVDFTMPFM LGISIL+RKP K+
Sbjct: 458 SLNRDTKKWNGMVQELLEWRADLAITDLTITSDRESAVDFTMPFMNLGISILFRKPTKEP 517
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P LFSF+ P S VW+Y+ AY+ VS+ LF L RIS
Sbjct: 518 PSLFSFMSPFSKQVWLYLGGAYMMVSMSLFVLGRIS 553
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA-GRIKYGCVEM 812
+A +TR VA +WWFFTLIM+SSYTANLAAFLT ++ PI N EDLA A G +KYG
Sbjct: 597 KAPATRAVASIWWFFTLIMVSSYTANLAAFLTVEQVVSPINNAEDLAAAGGAVKYGAKRD 656
Query: 813 GSTRNFFK 820
GST +FFK
Sbjct: 657 GSTISFFK 664
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 13/96 (13%)
Query: 563 SSGSRLRYSAKNSNVSL----------YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK 612
++G ++Y AK ++ Y +M+ M +++ + SN EG++RV E
Sbjct: 644 AAGGAVKYGAKRDGSTISFFKDAEYGTYAKMYQFMMANQ-DLLTSSNPEGLQRVKTEN-- 700
Query: 613 YAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
YAF MEST IEY VE+ CD+ Q+GGLLD KGYGIAM
Sbjct: 701 YAFLMESTSIEYIVERECDVTQIGGLLDDKGYGIAM 736
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 731
G+ +DLI ++ L F Y F+L+ + YG+LN T KWNG++ EL E
Sbjct: 429 GFGIDLIHELSLMLGFNYTFILQEDGVYGSLNRDTKKWNGMVQELLE 475
>gi|242021676|ref|XP_002431270.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
gi|212516524|gb|EEB18532.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
Length = 669
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 249/390 (63%), Gaps = 24/390 (6%)
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
PLLK+IKNS+ESHI+LDCS++K +LKQA+++ +M DY +Y+++ ++ HT++ +
Sbjct: 8 PLLKQIKNSAESHIVLDCSIEKIYHVLKQAQQIGMMSDYHSYLVTS----LDLHTIELDE 63
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV---KIEAALMYDAV 300
F+ G NIT R+++P P ++ ++N W E+ GR L + K E +LMYDAV
Sbjct: 64 FKYGGTNITAFRLVDPERPELQKVVNDWANNESRYGRKLESSSSGTTSNKTETSLMYDAV 123
Query: 301 YLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
+LFA AL L + + PLSC+ +W HG + N MK + + G+TG I D+Q G R
Sbjct: 124 HLFAKALHDLDSSQRIDIKPLSCDAVDTWPHGYSLINYMKIVEMQGLTGVIKFDNQ-GFR 182
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
+SFSL+ +E + + +GTWN+ G+N +RT ++ + E + N+T VT+
Sbjct: 183 SSFSLDIIELGREGLRKIGTWNSTEGVNLTRTYGEVYTQIVESLHNKTFLVTT------- 235
Query: 420 VLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
PY M+ + L G YSVDLI I+ L F Y F L + YG+ N +T
Sbjct: 236 --ILSSPYCMRKNSSERLTGNDQFEGYSVDLIYEISKILGFNYTFKLVPDGRYGSFNRET 293
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+W+G++ EL +Q+ADLAI DLTIT +R AVDFTMPFM LGISILYRKP K+ P+LFSF
Sbjct: 294 KEWDGMMKELLDQKADLAIADLTITYDREQAVDFTMPFMNLGISILYRKPIKQPPNLFSF 353
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L PLS DVW+YMATAYLGVS+LLF LAR S
Sbjct: 354 LSPLSLDVWIYMATAYLGVSVLLFILARFS 383
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S M+S++ +VF SNKEGV+RV+K KG YAF MEST IEY +E NC+L
Sbjct: 493 RDSNFSTYQRMWSFMDSAKSTVFTSSNKEGVDRVLKGKGSYAFLMESTSIEYVIETNCEL 552
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGGLLDSKGYGIAM P S + S KL+ +G+ +++K
Sbjct: 553 TQVGGLLDSKGYGIAMPPNSPYRTAISGAILKLQE--EGKLHILK 595
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
F+L R + Y NP + E Q + + F + S++ +AVSTR+VAG
Sbjct: 377 FILARFSPYEWDNPHPCNEEPDVLENQFSLMNSLWFTVGSLMQQGSDITPKAVSTRMVAG 436
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
MWWFFTLIMISSYTANLAAFLT RM+ PI++ EDLAK +IKYG + GST +FF+
Sbjct: 437 MWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALRGGSTASFFR 493
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ + L G YSVDLI I+ L F Y F L + YG+ N +T +W+G+
Sbjct: 240 PYCMRKNSSERLTGNDQFEGYSVDLIYEISKILGFNYTFKLVPDGRYGSFNRETKEWDGM 299
Query: 726 IGELQEQ 732
+ EL +Q
Sbjct: 300 MKELLDQ 306
>gi|241652897|ref|XP_002410444.1| excitatory amino acid transporter, putative [Ixodes scapularis]
gi|215501641|gb|EEC11135.1| excitatory amino acid transporter, putative [Ixodes scapularis]
Length = 905
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 301/574 (52%), Gaps = 32/574 (5%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDII------LEPIVQHVENYDSLHTA 54
+KI GIF ++ + AF AV R+N A P L V+H+E DS +
Sbjct: 21 IKIGGIFETGDDVLEMAFSSAVDRVNTMGLAEPGTQFVAAGSRLLARVEHIERLDSFQAS 80
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
+ +C+ EG+AA+FGPQS E + S C + D+PH+E WD P N H VN++
Sbjct: 81 RKVCSLLEEGVAAVFGPQSGEASAAVRSACDVLDVPHIETHWDYRAR--PDN--HSVNLF 136
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P + K I DW TF I+YE +D L+ LQ++L++ +++ V +RQ
Sbjct: 137 PHPAALGKAYLDFIKHKDWRTFAILYEENDALIRLQEILKDPLMRERK-------VVVRQ 189
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
+ YR +LK++ S +I+LD ++ T LK A++V +M +Y NY ++ +
Sbjct: 190 FESGVE-YRKILKDVGKSGIKNIVLDVPTERIHTALKHAQQVDMMSEYHNYFITS----L 244
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+AHTVD +DFQ G NI+ R+++ + W+ + + + A
Sbjct: 245 DAHTVDMEDFQYGGTNISGFRLVDVNAKEFDEVARDWLTRRLRFSKKGEKEENFYRTKVA 304
Query: 295 LMYDAVYLFAAALQSLGER---KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
LMYDAV LFA AL+ L K PLSCE W G M+ I + G+TG I
Sbjct: 305 LMYDAVRLFATALRDLQPDNGPKIQVRPLSCETEEPWAQGNSFVKYMRMINVQGLTGNIR 364
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ G R L +E + + G W G+N + + +E + + N+TL VT
Sbjct: 365 FNPN-GHRTDMRLAILEITHNGLREAGEWTMHGGINITTNYSRQLEEARLHLMNKTLIVT 423
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIAN--ELNFTYKFVLERENTYGTL 469
+ A +L + + N + GY +DL++ I+ +++ YK + +G
Sbjct: 424 TLVQAPYTMLKENHAELEGN---AKYEGYCIDLLEEISKLPDISLKYKIREVADKAHGRR 480
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ + +WNG+IGEL +ADLAI DLTIT R VDFTMPFM LGISILYRK KK P
Sbjct: 481 DDKN-EWNGMIGELLHGKADLAIADLTITYVREEVVDFTMPFMNLGISILYRKADKKPPW 539
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSFL PLS +VW+YM+TA+LGVSL LF +AR S
Sbjct: 540 LFSFLAPLSLEVWIYMSTAFLGVSLFLFVVARFS 573
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 75/119 (63%)
Query: 702 YKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLV 761
+ FV+ R + Y +NP N E + + + F I ++ A+STR+
Sbjct: 565 FLFVVARFSPYEWVNPHPCDPNPTELENRFTIWNTLWFTIGCLMQQGCDVTPRALSTRVA 624
Query: 762 AGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
AGMWWFFTLIM+SSYTANLAAFLT R+ PI++VEDLAK I+YG ++ GST++FFK
Sbjct: 625 AGMWWFFTLIMVSSYTANLAAFLTVERLVSPIESVEDLAKQTTIQYGSLQSGSTQSFFK 683
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S Y++M M+++RPSVF +SN++G+ERV +GKYA+ MEST IEY +E+NCDL
Sbjct: 683 KESEFPTYKKMWHVMQAARPSVFTESNQKGIERV--RRGKYAYLMESTSIEYAIERNCDL 740
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+G LLD+KGYGIA P
Sbjct: 741 TQIGSLLDNKGYGIATP 757
>gi|189235359|ref|XP_966884.2| PREDICTED: similar to CG11155 CG11155-PB, partial [Tribolium
castaneum]
Length = 1027
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 247/830 (29%), Positives = 402/830 (48%), Gaps = 107/830 (12%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI IF ++ + AT AF+ AV +INKD K L P L +Q+V DS H +K C
Sbjct: 24 VKIGAIFTEDQRDSATELAFKYAVYKINKD-KTLLPYTSLVYDIQYVPRDDSFHASKKAC 82
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
N G+ A+FGP I S+C DIPH+EA D + +N++P H
Sbjct: 83 NQVQHGVHAVFGPSDPLLGAHIHSICDALDIPHLEARLDLDTDIRE----FSINLHPAQH 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
L++ ++ ++W IIYE L+ L++++ + H+ D EI +RQ P+
Sbjct: 139 LLNTAFQDVMAFLNWTKVAIIYEEDYGLIKLRELVRSPHNGDLEIH-------LRQADPE 191
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ YR +LKEIK+ +I++D LK ++ M DY+ + L T + T
Sbjct: 192 S--YRAVLKEIKSKEIHNIVIDTKPSNMQHFLKGILQLQ-MNDYKYHYLFTT---FDMET 245
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
D +DF+ + N+T R+++ T+ ++ ++ + + + ++ EAAL+YD
Sbjct: 246 FDLEDFKYNFVNMTAFRVVDVTDLSVQEVLRDMARFQANINADSKLNSTYLQAEAALIYD 305
Query: 299 AVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
+V++FA LQ+L + L + +SC+ W GL + N + ++ G++G I + G
Sbjct: 306 SVFVFAIGLQTLEQSHTLKLSNVSCDKEQPWLEGLSLINYINAVEFKGLSGPIEF--KEG 363
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
RR F L+ ++ +G W G+N + D N TL VT+
Sbjct: 364 RRIQFKLDLLKLKQHALVKVGEWRPGAGVNITDRAAFFDPGTM----NVTLVVTT----- 414
Query: 418 LRVLFQGEPYMMKNPETG----ELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ 472
+L Q PY+M +T E Y G+ +DL+K IA+ + F Y+ L ++ YG ++ +
Sbjct: 415 --ILEQ--PYVMLRTQTNVVGNERYEGFCIDLLKEIASMVGFEYRIELVPDSKYGVIDLE 470
Query: 473 TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFS 532
TG+WNG++ +L +++ADLA+ +TI R + +DFT PFM LGISIL++ P K+ FS
Sbjct: 471 TGEWNGIVRQLMDKKADLAVGSMTINYARESVIDFTKPFMNLGISILFKVPTDKESAFFS 530
Query: 533 FLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRP 592
F PL FD+W+++ A FF++ + + R++
Sbjct: 531 FFSPLGFDIWIFVGGA--------FFMSSFTLFTLARFTP-------------------- 562
Query: 593 SVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI--AMPT 650
E V + K + ++ + ++ + + G L + G+ +PT
Sbjct: 563 ----------YEWVYPQPWKRSKYLVN-----QLSMSNSFWFIAGTLLRQPSGVNPQVPT 607
Query: 651 SKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLEREN 710
S+ FSF NP +++ Y +++ + FV+ R +
Sbjct: 608 SQQARLFSF----------------MNPLAMDIWMYVFSAYVLVSITM-----FVVARFS 646
Query: 711 TYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTL 770
Y NP + E Q + F I +++ +A STR+V G+WWFFTL
Sbjct: 647 PYEWHNPHPCDMENELVENQFSLANSFWFTIGTLMQQGSDLNPKATSTRIVGGIWWFFTL 706
Query: 771 IMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
I+ISSYTANLAAFLT RM PI+N EDLA I YG +E GST FF+
Sbjct: 707 IIISSYTANLAAFLTVERMITPIENAEDLAGQTEIPYGTLESGSTMTFFR 756
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M ME+ +PSVFV + +EG++RV++ G YAF MEST
Sbjct: 746 LESGSTMTF-FRDSMIETYKKMWRFMENRKPSVFVPTYEEGIQRVLE--GNYAFLMESTM 802
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 803 LDYTVQRDCNLTQIGGLLDSKGYGIATPMGSPWRDKISLAILELQ 847
>gi|391328671|ref|XP_003738808.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Metaseiulus occidentalis]
Length = 879
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 309/572 (54%), Gaps = 46/572 (8%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F ++E AF +A+ R+NKD L ++ P V+ VE D K +C +G
Sbjct: 11 GLFDNEDDEQDFAFRVAIERVNKDNGILLKSRLI-PKVERVEKDDCFRATKKVCTLLRDG 69
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
IA IFGP S ++S+C D+PHVE WD F +N++P+ ++++
Sbjct: 70 IAGIFGPTSDVTSMHVQSICDALDVPHVEMRWD----FQLQRDDLSINLFPKPSILAQAY 125
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
+I DW +F ++YE H+ ++ L+ ++ A + +I+ + Q P+ YR
Sbjct: 126 VDLIKTWDWKSFALVYEDHEGIIRLKDFIKGARREGWKIQ-------MYQFVPN-QPYRD 177
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
L +IK S + ++LD LK A++V ++ + +Y++S ++ HTVD ++F
Sbjct: 178 LFWKIKKSDQHRVVLDVHRKNLYECLKHAQQVGMLTESHSYLISS----LDLHTVDLEEF 233
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRA------ETVKIEAALMYD 298
+ G IT +R+++ + +++ ++GW E G N RA +K E ALMYD
Sbjct: 234 KYGQTKITGLRLVDVDSSELQNFLDGWKKMSQESG---NKRAPPAPLPHLIKTETALMYD 290
Query: 299 AVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
AV LFA LQ L K + P +SC+ S G + NLM+ IT+ G+TG I+ DSQ G
Sbjct: 291 AVKLFAMGLQQLDLTKSVDFPVISCDAAESSSDGSSLINLMRPITLHGLTGDISFDSQ-G 349
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
R++F L+ + +D + +G WN +++ E + +L + +KT
Sbjct: 350 FRSTFQLDVMSLKTDGLQKVGYWNPK---------QRVVVEDNSTSDYDSLLIRNKTLVV 400
Query: 418 LRVLFQGEPYMMKNPE----TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
VL +PYMM TG GY VDL++ ++ L F+Y+ L + YG N
Sbjct: 401 STVL--TDPYMMLKESAHFLTGNERFEGYCVDLLQELSRALGFSYEIRLAADGAYGIKN- 457
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+G WNG+IGE+ +ADLAI DLTITS R AAVDFTMPFM GISIL++KP +K LF
Sbjct: 458 DSGYWNGMIGEVVYGKADLAIADLTITSAREAAVDFTMPFMNTGISILFKKPTQKATSLF 517
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FL P S +VW Y+ AYLGVS +LF + R+S
Sbjct: 518 GFLSPFSTEVWTYVVGAYLGVSCVLFLVGRMS 549
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
F++ R + Y NP + N + E + + F I S++ +A+STR VAG
Sbjct: 543 FLVGRMSPYEWDNPHPCRQNDQVLENSFSLLNSMWFTIGSLMQQGSDLAPKAMSTRTVAG 602
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+W+FFTLIMISSYTANLAAFLT + P+++ +DLAK +IKYGCV+ GSTR FFK
Sbjct: 603 IWYFFTLIMISSYTANLAAFLTVEKTVYPVESADDLAKQTKIKYGCVKSGSTRAFFK 659
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS R K S + + +MH ME + +V ++ EG +RV +G YAF MES
Sbjct: 649 VKSGST-RAFFKESKIPTFMKMHKFME--ELNTYVATSAEGKQRV--SQGDYAFLMESAS 703
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGI-AMPTSKFLAKFSFGFAKLR 665
IE+ VE+NC+L Q+GGLLD+KGYGI + S F S G +L+
Sbjct: 704 IEFLVERNCNLTQIGGLLDNKGYGIVTVKNSPFRQVLSSGILQLQ 748
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPE----TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PYMM TG GY VDL++ ++ L F+Y+ L + YG N +G WNG
Sbjct: 406 DPYMMLKESAHFLTGNERFEGYCVDLLQELSRALGFSYEIRLAADGAYGIKN-DSGYWNG 464
Query: 725 LIGEL 729
+IGE+
Sbjct: 465 MIGEV 469
>gi|307192444|gb|EFN75660.1| Glutamate receptor, ionotropic kainate 2 [Harpegnathos saltator]
Length = 933
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 323/602 (53%), Gaps = 87/602 (14%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCN 59
+KI IF +E+ +AF+ A+ ++ L P L P+++H++ + DS +TA +C
Sbjct: 28 IKIGAIFHRGDEDYISAFQRAIAETRYEY--LAPAFELIPVIKHIDADTDSFNTAAKVCE 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYF-----IPTNGVHGVNVY 114
EG+AAIFGP S R I+ S +DIPH+E W N+ + +NV+
Sbjct: 86 LLEEGVAAIFGPASPHTRGIVASTAARYDIPHIEYVWRENEGLRADPIAKSPSSMTINVF 145
Query: 115 PESHLISKG-----------ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEI 163
P++ +IS+ I+ I+ M W F IYE D L +Q+ L D I
Sbjct: 146 PDNEMISQARALEPNRIRSAIADIVESMQWRNFAAIYENDDGLSRIQKTLTLKRTKDNPI 205
Query: 164 RPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ 223
TIRQL +D YRP+LKEI + S +I++D K + +L QAKEV L+ DY
Sbjct: 206 -------TIRQLGKGSD-YRPILKEINSLSVCNIIIDIEPQKLIHVLNQAKEVKLLSDYC 257
Query: 224 NYILSLTSYWINAHTVDFQDFQPGY-ANITTVRMINPTNPHIRSIMNGWIYEENERGRSL 282
N+I++ ++++ + + + G ANIT G EN+
Sbjct: 258 NFIIT----YLDSSKLPILEVRNGTTANIT-----------------GLSLREND----- 291
Query: 283 NVRAETVK-IEAALMYDAVYLFAAALQSLGER-----KPL---PTPLSCENPSSWQHGLG 333
E + + +A++YDAV+L AL++L R +P+ P PLSC + +Q G
Sbjct: 292 ---VEGINWLNSAVLYDAVFLLNKALETLNARNVDNDEPIVIEPMPLSCNDGKRYQAGQN 348
Query: 334 IGNLMKSIT-IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTV 392
I + M+ ++ I +TG +++D + GRR +F++ +++ G W+ GL+ RT
Sbjct: 349 ITSAMRELSKIGKITGTMSID-EYGRRRNFNVRILDFRQPGIVETGFWDPD-GLHFIRTE 406
Query: 393 EQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETG---------ELYGYSVD 443
++++ + ++ + ++++ G PY+M+ + GY +D
Sbjct: 407 QELESYLNKSVQEKMFRISTRL---------GAPYVMEVTDGSTRGIMIDQKRYEGYCID 457
Query: 444 LIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRA 503
LI+ IA L F YKF L + YG NP+T WNGLI L ++ ADLAICDLTIT +R +
Sbjct: 458 LIEEIAQHLKFQYKFELVPDGQYGNFNPKTKTWNGLIRRLLDREADLAICDLTITYQRES 517
Query: 504 AVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
AVDF+MPFM LGISIL+ KP +K PDLFSFL PLS DVW+YMATAYL VS++LF AR++
Sbjct: 518 AVDFSMPFMNLGISILFSKPEEKVPDLFSFLSPLSADVWIYMATAYLAVSIMLFLQARMA 577
Query: 564 SG 565
G
Sbjct: 578 PG 579
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S Y+RM + M +RPSVF SN EGV+RV+K K YAF MEST IEY +E+NC++
Sbjct: 687 RDSNYSTYKRMWAVMTENRPSVFTDSNDEGVDRVIKSKRTYAFLMESTSIEYRMERNCEI 746
Query: 633 MQVGGLLDSKGYGIAMP 649
+VGGLLD+KGYGIA+P
Sbjct: 747 EKVGGLLDNKGYGIALP 763
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A S R++A MWWFFTLIMISSYTANLAAFLT +M+ PIK VEDLAK +IKYG + G
Sbjct: 621 KAPSIRMLASMWWFFTLIMISSYTANLAAFLTVDKMDTPIKGVEDLAKQTKIKYGSIVGG 680
Query: 814 STRNFFK 820
ST NFF+
Sbjct: 681 STSNFFR 687
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ------VDTFIL 738
GY +DLI+ IA L F YKF L + YG NP+T WNGLI L ++ D I
Sbjct: 453 GYCIDLIEEIAQHLKFQYKFELVPDGQYGNFNPKTKTWNGLIRRLLDREADLAICDLTIT 512
Query: 739 FFIYSILFFIYTFVNEAVS 757
+ S + F F+N +S
Sbjct: 513 YQRESAVDFSMPFMNLGIS 531
>gi|118101697|ref|XP_417766.2| PREDICTED: glutamate receptor, ionotropic kainate 3 [Gallus gallus]
Length = 919
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 198/582 (34%), Positives = 311/582 (53%), Gaps = 49/582 (8%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + ++ AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYTDGPNTQVMSAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP DTDD RPLLKE+K E I+ DCS IL+QA + +M +Y ++I +
Sbjct: 204 IRQLPLDTDDARPLLKEMKRGREFRIIFDCSHLMAAQILRQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG--RSLNVRAETV 289
++ + +D + ++ N+T R++N NPH+ SI+ W E + L + +
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVENPHVSSIIEKWAMERLQSAPKAELGLLDGVM 319
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 320 MTDAALLYDAVHVVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 375
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +GTWN + GLN + + + + NR+
Sbjct: 376 GRIVFNKSSGLRTDFDLDIISLKEDGLEKVGTWNPSNGLNITEISKGRGPNVTDSLSNRS 435
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M L+G Y +DL+K +A L FTY+ L
Sbjct: 436 LIVTT-------VL--EEPFVMFRKSDTALFGNDRFEGYCIDLLKELAVILGFTYEIRLV 486
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 487 EDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 545
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 546 KPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+P+ VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPTALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
QVGGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A L FTY+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDTALFGNDRFEGYCIDLLKELAVILGFTYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|241704138|ref|XP_002413219.1| excitatory amino acid transporter, putative [Ixodes scapularis]
gi|215507033|gb|EEC16527.1| excitatory amino acid transporter, putative [Ixodes scapularis]
Length = 728
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 318/577 (55%), Gaps = 53/577 (9%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
GIF ++ +F A+ +INKD LP ++ PI+ V+ DS +K +C +
Sbjct: 2 GIFESGSQKAQLSFRYAIDQINKDISILPRTELM-PIIHEVKQKDSFTASKALCTFFKQR 60
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
++AI GP S + +S C ++PH++ W+P P + +N++P+ + K
Sbjct: 61 VSAIIGPTSEAVTSFTKSACTNLNVPHLQTSWEPKSNRNP----YTLNLFPDPEVFGKAY 116
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
+I + W +FT++YE D+L+ L+ V+ ++ + SV++ Q+ P ++
Sbjct: 117 LDLIINKKWKSFTVLYEHQDSLILLKDVINSSLAQNH-------SVSLVQVNPKLS-FKK 168
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+LK+I + +I+LD + + +QA EV++M Y NYI++ ++ HT+D ++F
Sbjct: 169 MLKDIGYQKQFNIILDVKTESLPLLFRQAMEVNMMTYYHNYIITS----LDLHTLDLREF 224
Query: 245 QPGYANITTVRMINPTNPHIRSIMNG-------WIYEENERGRSLNVRAETVKIEAALMY 297
ANIT R+++P+ P + +++ W Y + ++ +T AL +
Sbjct: 225 VGLQANITAFRLVDPSRPEVMNVLRDIKIGSALWRYGADNHTSPAHIDTDT-----ALTF 279
Query: 298 DAVYLFAAALQSLGERKPLPT----PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
DAV L A L + + L T L+CE+P W+HG + + MK ITI G+TG + L+
Sbjct: 280 DAVALLANGLHN--ADRVLQTLDLQSLNCEHPKPWRHGSSLLDAMKMITIRGLTGDVRLE 337
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQM-DKEKKEKIENRTLTVTS 412
+ G R F+L+ +E + K + TW+ GL++ + +KE +++E TL VT+
Sbjct: 338 EK-GVREEFTLDVLELKARGLKQVATWHPRTGLSYFANYTLISEKEFTDELEGFTLKVTT 396
Query: 413 KTFAKLRVLFQGEPYMMKNPET------GELYGYSVDLIKMIANELNFTYKFVLERENTY 466
+ +PY M P++ YGY++DLI M+A E+ F ++F L + Y
Sbjct: 397 ---------VETKPYTMVYPDSENKTGNDRFYGYAIDLIAMLAKEIGFKHEFYLTEDGKY 447
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G+ P +WNG+I EL +++AD AI DLTIT ER +AVDFT+PFM GISIL++K K
Sbjct: 448 GSPQPNK-EWNGMIKELLDRKADAAIVDLTITYERESAVDFTIPFMNTGISILFKKAEKS 506
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P LFSFL P S DVW+YM TAYLGVSLL+F + R +
Sbjct: 507 DPSLFSFLYPFSVDVWLYMLTAYLGVSLLMFIMGRFT 543
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+ + MWWFF+LIMISSYTANLAAFLT RM PI+N DLAK +I YGC E GS
Sbjct: 588 AISTRIASSMWWFFSLIMISSYTANLAAFLTAQRMTAPIENANDLAKQTKIVYGCKEEGS 647
Query: 815 TRNFFK 820
T FFK
Sbjct: 648 TCLFFK 653
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
KNS+ L +RM + M ++RP F SN++ VERV +KG YAF MES+ IEY VE++C+L
Sbjct: 653 KNSDDPLMKRMWTTMLAARPKAFADSNEKAVERV--KKGNYAFLMESSSIEYVVERDCNL 710
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGLLDSKGYGIA P
Sbjct: 711 TQIGGLLDSKGYGIATP 727
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 660 GFAKLRVLFQGEPYMMKNPET------GELYGYSVDLIKMIANELNFTYKFVLERENTYG 713
GF + +PY M P++ YGY++DLI M+A E+ F ++F L + YG
Sbjct: 389 GFTLKVTTVETKPYTMVYPDSENKTGNDRFYGYAIDLIAMLAKEIGFKHEFYLTEDGKYG 448
Query: 714 TLNPQTGKWNGLIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
+ P +WNG+I EL ++ VD I + S + F F+N +S
Sbjct: 449 SPQPNK-EWNGMIKELLDRKADAAIVDLTITYERESAVDFTIPFMNTGIS 497
>gi|327261476|ref|XP_003215556.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Anolis
carolinensis]
Length = 911
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 297/556 (53%), Gaps = 35/556 (6%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF AV IN++ + L P+ L Q + YDS +K C+ S G+AAIFGP +
Sbjct: 59 AFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSS 117
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKGISVIINDMDWDT 135
N ++S+C +PH++ W K+ + N V++YP+ +S+ I ++ W T
Sbjct: 118 ANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKT 174
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
T++Y+ L+ LQ++++ + ++ IRQLP DT D +PLLKE+K E
Sbjct: 175 VTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPADTKDAKPLLKEMKRGKEF 227
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
H++ DC+ + ILKQA + +M +Y +YI + ++ +D + ++ N+T R
Sbjct: 228 HVIFDCNHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFALDVEPYRYSGVNMTGFR 283
Query: 256 MINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALMYDAVYLFAAALQSLGER 313
++N N + SI+ W E + + + + +AALMYDAV++ + A+Q +
Sbjct: 284 ILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQM 343
Query: 314 KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
+ L C W+ G NL+K +G+TGRI + G R F L+ + +
Sbjct: 344 TV--SSLQCNRHKPWRFGTRFMNLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEG 401
Query: 374 WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+ +GTW+ A GLN + + + + NR+LTVT+ EPY+M
Sbjct: 402 LEKIGTWDPASGLNMTENQKGKPANITDSLSNRSLTVTT---------ILEEPYVMFKKS 452
Query: 434 TGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
LYG Y +DL++ ++ L FTY+ L + YG + +G+WNG++ EL + +
Sbjct: 453 DKPLYGNDRFEGYCIDLLRELSTFLGFTYEIRLVEDGKYGARDDSSGQWNGMVRELIDHK 512
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLA+ L IT R +DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+
Sbjct: 513 ADLAVAPLAITYVRETVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILL 572
Query: 548 AYLGVSLLLFFLARIS 563
AYLGVS +LF +AR S
Sbjct: 573 AYLGVSCVLFVIARFS 588
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 632 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGTVEDG 691
Query: 814 STRNFFK 820
+T FFK
Sbjct: 692 ATMTFFK 698
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S ++ Y++M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 698 KKSKIATYEKMWAFMNSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 755
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + A L + +G+ +MMK
Sbjct: 756 TQIGGLIDSKGYGVGTPMGSPYRDKIT--IAILHLQEEGKLHMMK 798
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L FTY+ L + YG + +G+WNG
Sbjct: 444 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTFLGFTYEIRLVEDGKYGARDDSSGQWNG 503
Query: 725 LIGEL 729
++ EL
Sbjct: 504 MVREL 508
>gi|427778885|gb|JAA54894.1| Putative excitatory amino acid transporter [Rhipicephalus
pulchellus]
Length = 999
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 310/620 (50%), Gaps = 78/620 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALP------PDIILEPIVQHVENYDSLHTA 54
+KI GIF ++ + AF AV RIN P P L V+H E DS +
Sbjct: 32 IKIGGIFETGDDVLEMAFSSAVDRINTMGLGEPGAQFVTPGSRLLARVEHTERLDSFQAS 91
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI-PTNGVHGVNV 113
+ +C EG+AA+FGPQS E + S C + D+PH+E WD Y + P N H VN+
Sbjct: 92 RKVCALLEEGVAAVFGPQSGEASAAVRSACAVLDVPHMETRWD---YRVRPDN--HSVNL 146
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
+P + K I DW TF ++YE +D L+ LQ++L++ +++ V +R
Sbjct: 147 FPHPAALGKAYLDFIKHKDWRTFAVLYEENDALIRLQEILKDPLMRERK-------VVVR 199
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
Q P +YR +LK++ S +I+LD ++ T LK A++V +M +Y NY ++
Sbjct: 200 QFEPGV-EYRKVLKDVGKSGIKNIVLDVPIEHVHTALKHAQQVDMMSEYHNYFITS---- 254
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI---YEENERGRSLNVRAETVK 290
++AHTVD +DFQ G NI+ R+++ + W+ ++G R T K
Sbjct: 255 LDAHTVDMEDFQYGGTNISAFRLVDTNAKEFDEVARDWMTRRLRHGQKGEGNLYRNLTTK 314
Query: 291 IEAALMYDAVYLFAAALQSLGER---KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+ ALMYDAV LFA AL+ L K PLSCE W G M+ I I G+T
Sbjct: 315 V--ALMYDAVRLFATALRDLQPNNGPKIQVRPLSCETEEPWSQGNSFVKYMRMINIQGLT 372
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I + G R L +E + + G W G+N + + +E + + N+T
Sbjct: 373 GNIRFNPN-GHRTDMRLTVMEITHNGLREAGEWTMHGGINITTNYSRQLEEARLHLMNKT 431
Query: 408 LTVTSKTFAKLRVL------------FQG------------------------EPYMMKN 431
L VT+ +L ++G PY M
Sbjct: 432 LIVTTLVQPPYTMLKENHQELEGNAKYEGYCIDLLXXXLHLMNKTLIVTTLVQPPYTMLK 491
Query: 432 PETGEL------YGYSVDLIKMIAN--ELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
EL GY +DL++ IA ++N YK + +G + + +WNG+IGEL
Sbjct: 492 ENHQELEGNAKYEGYCIDLLEEIAKLPDINIKYKIREVADKAHGRRDDKN-EWNGMIGEL 550
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
+ +ADLAI DLTIT R VDFTMPFM LGISILY+K KK P LFSFL PLS +VW+
Sbjct: 551 LQGKADLAIADLTITYVREEVVDFTMPFMNLGISILYKKADKKPPWLFSFLAPLSLEVWI 610
Query: 544 YMATAYLGVSLLLFFLARIS 563
YM+TA+LGVSL LF +AR S
Sbjct: 611 YMSTAFLGVSLFLFVVARFS 630
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+ AGMWWFFTLIM+SSYTANLAAFLT R+ PI++VEDLAK I+YGC++ GS
Sbjct: 708 ALSTRVAAGMWWFFTLIMVSSYTANLAAFLTVERLVSPIESVEDLAKQTSIQYGCLQSGS 767
Query: 815 TRNFFK 820
T+ FFK
Sbjct: 768 TQAFFK 773
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S Y++M M+++RPSVF +SN +G+ERV +GKYA+ MEST IEY +E+NCDL
Sbjct: 773 KESEFPTYKKMWHVMQAARPSVFTESNYKGIERV--RRGKYAYLMESTSIEYAIERNCDL 830
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+G LLD+KGYGIA P
Sbjct: 831 TQIGSLLDNKGYGIATP 847
>gi|149059773|gb|EDM10656.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_j [Rattus
norvegicus]
Length = 611
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 305/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR+S
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARVS 585
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|109002088|ref|XP_001111351.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 2
[Macaca mulatta]
Length = 919
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 314/587 (53%), Gaps = 59/587 (10%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVN 112
K C+ + G+ AIFGP N ++S+C ++PH++ W K+ P N VN
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW---KHHPPDNKDTFYVN 151
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV-- 170
+YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 152 LYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRL 202
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 203 KIRQLPVDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT- 261
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET-- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 ---LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGL 314
Query: 289 ----VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSIT 342
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 315 LDGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQ 370
Query: 343 IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEK 402
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + +
Sbjct: 371 WEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEAAKGRGPNVTDS 430
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTY 456
+ NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y
Sbjct: 431 LTNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSY 481
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGI 516
+ L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+
Sbjct: 482 EIRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV 540
Query: 517 SILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 541 SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|149059764|gb|EDM10647.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_a [Rattus
norvegicus]
Length = 833
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 304/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|326933029|ref|XP_003212612.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Meleagris
gallopavo]
Length = 920
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 308/578 (53%), Gaps = 49/578 (8%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + ++ AF + IN++ + L P+ L +Q + +DS K
Sbjct: 41 GIFEYTDGPNTQVMSAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 99
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 100 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 157
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 158 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 208
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P DTDD RPLLKE+K E I+ DCS IL+QA + +M +Y ++I + ++
Sbjct: 209 PLDTDDARPLLKEMKRGREFRIIFDCSHLMAAQILRQAMAMGMMTEYYHFIFTT----LD 264
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG--RSLNVRAETVKIEA 293
+ +D + ++ N+T R++N NPH+ SI+ W E + L + + +A
Sbjct: 265 LYALDLEPYRYSGVNLTGFRILNVENPHVSSIIEKWAMERLQSAPKAELGLLDGVMMTDA 324
Query: 294 ALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
AL+YDAV++ + Q R P T L C +W+ G N +K +G+TGRI
Sbjct: 325 ALLYDAVHVVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIV 380
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ +G R F L+ + D + +GTWN + GLN + + + + NR+L VT
Sbjct: 381 FNKSSGLRTDFDLDIISLKEDGLEKVGTWNPSNGLNITEISKGRGPNVTDSLSNRSLIVT 440
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ VL EP++M L+G Y +DL+K +A L FTY+ L +
Sbjct: 441 T-------VL--EEPFVMFRKSDTALFGNDRFEGYCIDLLKELAVILGFTYEIRLVEDGK 491
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP
Sbjct: 492 YGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNG 550
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 551 TNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 588
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 632 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 691
Query: 814 STRNFFK 820
+T FFK
Sbjct: 692 ATMTFFK 698
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+P+ VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 698 KKSKISTFEKMWAFM-SSKPTALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 754
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
QVGGL+DSKGYGI P S + K + +L+
Sbjct: 755 TQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 788
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A L FTY+ L + YG + + G+WNG
Sbjct: 445 EPFVMFRKSDTALFGNDRFEGYCIDLLKELAVILGFTYEIRLVEDGKYGAQDDK-GQWNG 503
Query: 725 LIGEL 729
+I EL
Sbjct: 504 MIKEL 508
>gi|126310369|ref|XP_001367976.1| PREDICTED: glutamate receptor, ionotropic kainate 2 [Monodelphis
domestica]
Length = 908
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLVVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY+M LYG Y +DL++ +A L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ +A L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|124487364|ref|NP_001074566.1| glutamate receptor ionotropic, kainate 3 precursor [Mus musculus]
gi|385178634|sp|B1AS29.1|GRIK3_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Glutamate receptor 7;
Short=GluR-7; Short=GluR7; Flags: Precursor
gi|182888083|gb|AAI60379.1| Glutamate receptor, ionotropic, kainate 3 [synthetic construct]
Length = 919
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWAMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|3935134|gb|AAC80577.1| glutamate receptor subunit kainate subtype [Rattus norvegicus]
Length = 888
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 310/586 (52%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 5 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 63
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 64 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 121
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 122 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 172
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 173 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 230
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 231 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 284
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 285 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 340
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 341 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 400
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 401 TNRSLIVTT---------LLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 451
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 452 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 510
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 511 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 556
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 600 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 659
Query: 814 STRNFFK 820
+T FFK
Sbjct: 660 ATMTFFK 666
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 666 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 722
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 723 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 756
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 413 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 471
Query: 725 LIGEL 729
++ EL
Sbjct: 472 MVKEL 476
>gi|109287551|gb|AAI18005.1| Grik3 protein [Mus musculus]
Length = 895
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 34 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 92
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 93 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 150
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 151 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 201
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 202 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 259
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 260 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWAMERLQAAP----RAESGLL 313
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 314 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 369
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 370 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 429
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 430 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 480
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 481 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 539
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 540 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 585
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 629 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 751
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 752 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 785
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 442 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|163659915|ref|NP_001106187.1| glutamate receptor ionotropic, kainate 3 isoform 1 precursor
[Rattus norvegicus]
gi|149023932|gb|EDL80429.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_a [Rattus
norvegicus]
Length = 919
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 310/586 (52%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT---------LLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|149059766|gb|EDM10649.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_c [Rattus
norvegicus]
Length = 934
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 304/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|15028907|emb|CAC44965.1| glutamate receptor 7 [Homo sapiens]
Length = 872
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R S+
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYSIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|163659913|ref|NP_852038.2| glutamate receptor ionotropic, kainate 3 isoform 2 precursor
[Rattus norvegicus]
gi|149023933|gb|EDL80430.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_b [Rattus
norvegicus]
Length = 910
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 310/586 (52%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT---------LLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|149059770|gb|EDM10653.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_g [Rattus
norvegicus]
Length = 903
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 304/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|163659909|ref|NP_001104584.1| glutamate receptor ionotropic, kainate 1 isoform 3 [Rattus
norvegicus]
gi|204390|gb|AAA02874.1| glutamate receptor subunit 5-2 [Rattus norvegicus]
gi|149059768|gb|EDM10651.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_e [Rattus
norvegicus]
Length = 905
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 304/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|307180037|gb|EFN68113.1| Glutamate receptor, ionotropic kainate 2 [Camponotus floridanus]
Length = 920
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 210/590 (35%), Positives = 324/590 (54%), Gaps = 75/590 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCN 59
+KI GIF +E+ + F A+ +++ P ++++++ N DS TA C
Sbjct: 28 IKIGGIFHKGDEDHMSTFLKAISETK--YESPAPAFEFVSVIKYIDDNTDSFRTAAAACE 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP----TNGVHGVNVYP 115
EG+AAIFGP S R I+ S+ F+IPH+E W + +NV+P
Sbjct: 86 LLEEGVAAIFGPTSSYTRGIVASIATRFEIPHIEYVWRETEVLRTEAEEDKNPMTINVFP 145
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
ES +SK I+ ++ M W F IYE +D L +Q+ L D SV IR+L
Sbjct: 146 ESENVSKAIADTVDSMKWQGFVAIYENNDGLSRIQKALTLKRAKDN-------SVAIREL 198
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
+ DYRP+LKEI+N S S+ILLD +K + +L+QAKE+ L+ DY N++++ +++
Sbjct: 199 G-NGPDYRPMLKEIRNLSISNILLDVQPEKIINVLRQAKEIKLLADYSNFVIT----YLD 253
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVK-IEAA 294
A + + V + N TN +I G+ EN+ E V +++A
Sbjct: 254 A------------SKLPIVEIRNGTNANI----TGFSLREND--------VEDVNWLDSA 289
Query: 295 LMYDAVYLFAAALQSLGER-------KPL--PTPLSCENPSSWQHGLGIGNLMKSITIDG 345
++YDAV+L A+++L R + L P LSC+ +Q G I ++++ ++ G
Sbjct: 290 ILYDAVFLLQKAIETLNSRNIDNEFIRNLIDPVSLSCKKNDKYQAGPNITSIIRELSKMG 349
Query: 346 -MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
+TG +N+D + GRR F ++ +++ S+ K G W+ +S T ++M+ + I+
Sbjct: 350 KITGAMNID-EYGRRWDFKIQILDFRSEIIKT-GFWDKNGLQFNSETEKEMESYLYKSIK 407
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMMKNPETGE---------LYGYSVDLIKMIANELNFT 455
+ +++ G PY+M+ + E GY +DLIK IA +L F+
Sbjct: 408 EKEFIIST---------IVGAPYVMEAIDASEDTILIGQKHYEGYCIDLIKHIAKDLGFS 458
Query: 456 YKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
YKF + + GT +P+T WNGLI L + ++DLAICDLTIT R +AVDF+MPFM LG
Sbjct: 459 YKFEI-VPGSQGTYDPKTKSWNGLIRHLLDHKSDLAICDLTITFARESAVDFSMPFMNLG 517
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
ISIL+ KP +K PDLFSFL PLS DVW+YMATAYL VS++LF AR++ G
Sbjct: 518 ISILFSKPEEKDPDLFSFLSPLSTDVWMYMATAYLAVSIMLFVQARMAPG 567
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 65/77 (84%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S+Y+RM + M ++PSVF K NKEGVERVVK KG YAF MEST IEY++++NC++
Sbjct: 675 RDSNYSIYKRMFATMMETKPSVFTKDNKEGVERVVKSKGLYAFLMESTTIEYQMQRNCEI 734
Query: 633 MQVGGLLDSKGYGIAMP 649
++GGL+D+KGYGIA+P
Sbjct: 735 DKIGGLIDNKGYGIALP 751
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A S R + MWWFFTLIMISSYTANLAAFLT +M PI NV+DLA+ +IKYG V G
Sbjct: 609 KAPSIRTLTTMWWFFTLIMISSYTANLAAFLTAAQMETPINNVDDLARQTKIKYGSVGGG 668
Query: 814 STRNFFK 820
+T +FF+
Sbjct: 669 ATSSFFR 675
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 670 GEPYMMKNPETGE---------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M+ + E GY +DLIK IA +L F+YKF + + GT +P+T
Sbjct: 418 GAPYVMEAIDASEDTILIGQKHYEGYCIDLIKHIAKDLGFSYKFEI-VPGSQGTYDPKTK 476
Query: 721 KWNGLIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
WNGLI L + D I F S + F F+N +S
Sbjct: 477 SWNGLIRHLLDHKSDLAICDLTITFARESAVDFSMPFMNLGIS 519
>gi|149059771|gb|EDM10654.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_h [Rattus
norvegicus]
Length = 710
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 304/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 54/68 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFKV 821
ST FFKV
Sbjct: 689 STMTFFKV 696
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 501 MVKELIDH 508
>gi|402853959|ref|XP_003891655.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Papio anubis]
Length = 919
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPVDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|122063507|sp|Q38PU2.1|GRIK3_MACFA RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Glutamate receptor 7;
Short=GluR-7; Short=GluR7; Flags: Precursor
gi|76574782|gb|ABA47259.1| GluR7 [Macaca fascicularis]
Length = 919
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPVDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|148698373|gb|EDL30320.1| mCG10879 [Mus musculus]
Length = 904
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 25 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 83
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 84 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 141
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 142 ASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 192
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 193 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 248
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 249 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWAMERLQAAP----RAESGLLDGVM 304
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 305 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 360
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 361 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 420
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 421 LIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 471
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 472 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 530
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 531 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 572
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 616 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 675
Query: 814 STRNFFK 820
+T FFK
Sbjct: 676 ATMTFFK 682
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 682 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 738
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 739 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 772
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 429 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 487
Query: 725 LIGEL 729
++ EL
Sbjct: 488 MVKEL 492
>gi|403261065|ref|XP_003922956.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Saimiri boliviensis boliviensis]
Length = 892
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 305/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + +G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDASGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|297291419|ref|XP_001086640.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 2
[Macaca mulatta]
Length = 828
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G + L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTXLLTLLKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGFA-KLRVLFQGEPYMMKNPE 679
Q+GGL+DSKGYG+ P + F +LR+ + + + P+
Sbjct: 753 TQIGGLIDSKGYGVGTPMGRLYRSFCSAMVEELRMSLKCQRRLKHKPQ 800
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|403261061|ref|XP_003922954.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 908
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 305/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + +G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDASGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|163659911|ref|NP_001104587.1| glutamate receptor ionotropic, kainate 1 isoform 1 [Rattus
norvegicus]
gi|149059765|gb|EDM10648.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_b [Rattus
norvegicus]
Length = 949
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 307/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|345328771|ref|XP_001506390.2| PREDICTED: glutamate receptor, ionotropic kainate 2
[Ornithorhynchus anatinus]
Length = 911
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 302/573 (52%), Gaps = 41/573 (7%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP E AF AV IN++ + L P+ L Q + YDS +K C+
Sbjct: 43 GIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACD 100
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N V++YP+
Sbjct: 101 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFS 157
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQLP D
Sbjct: 158 SLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPAD 210
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
T D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + ++
Sbjct: 211 TKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFA 266
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALM 296
+D + ++ N+T R++N N + SI+ W E + + + + +AALM
Sbjct: 267 LDVEPYRYSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALM 326
Query: 297 YDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
YDAV++ + A+Q + + L C W+ G +L+K +G+TGRI +
Sbjct: 327 YDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKSN 384
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 385 GLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT---- 440
Query: 417 KLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLN 470
EPY++ LYG Y +DL++ +A L FTY+ L + YG +
Sbjct: 441 -----ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLIEDGKYGAQD 495
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP P +
Sbjct: 496 DGNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGV 555
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 556 FSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 588
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 632 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 691
Query: 814 STRNFFK 820
+T FFK
Sbjct: 692 ATMTFFK 698
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 698 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 755
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 756 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 798
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ +A L FTY+ L + YG + G+WNG
Sbjct: 444 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLIEDGKYGAQDDGNGQWNG 503
Query: 725 LIGEL 729
++ EL
Sbjct: 504 MVREL 508
>gi|441633964|ref|XP_003273333.2| PREDICTED: glutamate receptor, ionotropic kainate 3 [Nomascus
leucogenys]
Length = 838
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 2 LQIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 60
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 61 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 118
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 119 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 169
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS IL+QA + +M +Y ++I +
Sbjct: 170 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILRQAMAMGMMTEYYHFIFTT-- 227
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 228 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 281
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 282 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 337
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 338 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 397
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 398 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 448
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 449 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 507
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 508 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 553
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 597 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 656
Query: 814 STRNFFK 820
+T FFK
Sbjct: 657 ATMTFFK 663
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 663 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 719
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 720 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 753
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 410 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 468
Query: 725 LIGEL 729
++ EL
Sbjct: 469 MVKEL 473
>gi|17384613|emb|CAC80548.1| glutamate/kainate receptor subtype GluR7 [Homo sapiens]
gi|119627755|gb|EAX07350.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_a [Homo
sapiens]
Length = 872
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 313/582 (53%), Gaps = 49/582 (8%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG-RSLNVRAETVK 290
++ + +D + ++ N+T R++N NPH+ +I+ W E + RS + + V
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVM 319
Query: 291 I-EAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 320 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 375
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 376 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 435
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 436 LIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 486
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 487 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 545
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 546 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|28605145|ref|NP_000822.2| glutamate receptor ionotropic, kainate 3 precursor [Homo sapiens]
gi|212276502|sp|Q13003.3|GRIK3_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Excitatory amino acid
receptor 5; Short=EAA5; AltName: Full=Glutamate receptor
7; Short=GluR-7; Short=GluR7; Flags: Precursor
gi|119627756|gb|EAX07351.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_b [Homo
sapiens]
gi|162319064|gb|AAI56722.1| Glutamate receptor, ionotropic, kainate 3 [synthetic construct]
Length = 919
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 313/582 (53%), Gaps = 49/582 (8%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG-RSLNVRAETVK 290
++ + +D + ++ N+T R++N NPH+ +I+ W E + RS + + V
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVM 319
Query: 291 I-EAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 320 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 375
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 376 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 435
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 436 LIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 486
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 487 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 545
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 546 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|790534|gb|AAB60407.1| EAA5 [Homo sapiens]
Length = 919
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M S +PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SRKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|403261063|ref|XP_003922955.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 869
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 305/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + +G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDASGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|8393481|ref|NP_058937.1| glutamate receptor ionotropic, kainate 1 isoform 2 [Rattus
norvegicus]
gi|204388|gb|AAA02873.1| glutamate receptor subunit 5-1 [Rattus norvegicus]
gi|149059767|gb|EDM10650.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_d [Rattus
norvegicus]
Length = 920
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 307/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|348560538|ref|XP_003466070.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 1
[Cavia porcellus]
Length = 908
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHIVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|17384624|emb|CAC81020.1| kainate receptor subunit [Homo sapiens]
gi|296932854|gb|ADH93571.1| glutamate receptor form C [Homo sapiens]
Length = 892
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|256997164|dbj|BAI22775.1| glutamate receptor, ionotropic, kainate 3 [Pan troglodytes]
Length = 919
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEIAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|11386137|ref|NP_068775.1| glutamate receptor ionotropic, kainate 2 isoform 1 precursor [Homo
sapiens]
gi|257796300|ref|NP_001158172.1| glutamate receptor, ionotropic kainate 2 [Pan troglodytes]
gi|296198866|ref|XP_002746910.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Callithrix jacchus]
gi|332218565|ref|XP_003258425.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Nomascus leucogenys]
gi|397507857|ref|XP_003824398.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1 [Pan
paniscus]
gi|2492627|sp|Q13002.1|GRIK2_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Excitatory amino acid
receptor 4; Short=EAA4; AltName: Full=Glutamate receptor
6; Short=GluR-6; Short=GluR6; Flags: Precursor
gi|790532|gb|AAC50420.1| EAA4 [Homo sapiens]
gi|119568833|gb|EAW48448.1| glutamate receptor, ionotropic, kainate 2, isoform CRA_c [Homo
sapiens]
gi|256997162|dbj|BAI22774.1| glutamate receptor, ionotropic, kainate 2 [Pan troglodytes]
gi|296932850|gb|ADH93569.1| glutamate receptor form A [Homo sapiens]
gi|380783197|gb|AFE63474.1| glutamate receptor, ionotropic kainate 2 isoform 1 precursor
[Macaca mulatta]
Length = 908
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|261278362|ref|NP_001159719.1| glutamate receptor ionotropic, kainate 2 isoform 3 precursor [Homo
sapiens]
gi|332218567|ref|XP_003258426.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Nomascus leucogenys]
gi|390461926|ref|XP_003732763.1| PREDICTED: glutamate receptor, ionotropic kainate 2 [Callithrix
jacchus]
gi|397507861|ref|XP_003824400.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3 [Pan
paniscus]
Length = 892
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|797414|gb|AAB31362.1| GluR6 kainate receptor=ionotropic-type glutamate receptor [human,
caudate/putamen, Peptide, 908 aa]
Length = 908
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ + + +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--ESKLHMMK 795
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|344264583|ref|XP_003404371.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Loxodonta africana]
Length = 893
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VK+N+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKNNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|291396689|ref|XP_002714840.1| PREDICTED: glutamate receptor, ionotropic, kainate 2-like
[Oryctolagus cuniculus]
Length = 908
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|348560540|ref|XP_003466071.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 2
[Cavia porcellus]
Length = 869
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHIVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|297665470|ref|XP_002811085.1| PREDICTED: glutamate receptor, ionotropic kainate 3, partial [Pongo
abelii]
Length = 697
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQGALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 503 MVKELIDH 510
>gi|114555569|ref|XP_524666.2| PREDICTED: glutamate receptor, ionotropic kainate 3 isoform 2 [Pan
troglodytes]
Length = 919
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEIAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|344264581|ref|XP_003404370.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Loxodonta africana]
Length = 908
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VK+N+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKNNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|28559003|ref|NP_786944.1| glutamate receptor ionotropic, kainate 2 isoform 2 precursor [Homo
sapiens]
gi|332218569|ref|XP_003258427.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Nomascus leucogenys]
gi|390461924|ref|XP_002746911.2| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Callithrix jacchus]
gi|397507859|ref|XP_003824399.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2 [Pan
paniscus]
gi|15485592|emb|CAC67487.1| GluR6 kainate receptor [Homo sapiens]
gi|119568831|gb|EAW48446.1| glutamate receptor, ionotropic, kainate 2, isoform CRA_a [Homo
sapiens]
Length = 869
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|395860245|ref|XP_003802424.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Otolemur garnettii]
Length = 905
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 692 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 749
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 750 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 792
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK R++ ++ G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQARLE---IQAG 685
Query: 814 STRNFFK 820
FFK
Sbjct: 686 ELMTFFK 692
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|149059769|gb|EDM10652.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_f [Rattus
norvegicus]
Length = 871
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 307/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|395830179|ref|XP_003788212.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Otolemur
garnettii]
Length = 919
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS IL+QA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILRQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|410966796|ref|XP_003989915.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Felis catus]
Length = 919
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|329664662|ref|NP_001192932.1| glutamate receptor, ionotropic kainate 3 precursor [Bos taurus]
gi|296488996|tpg|DAA31109.1| TPA: Glutamate receptor, ionotropic kainate 3-like [Bos taurus]
Length = 919
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|380799711|gb|AFE71731.1| glutamate receptor, ionotropic kainate 3 precursor, partial [Macaca
mulatta]
Length = 880
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 1 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 59
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 60 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 117
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 118 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 168
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 169 PVDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 224
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 225 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 280
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 281 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 336
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 337 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 396
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 397 LIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 447
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 448 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 506
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 507 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 548
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 592 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 651
Query: 814 STRNFFK 820
+T FFK
Sbjct: 652 ATMTFFK 658
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 658 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 714
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 715 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 748
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 405 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 463
Query: 725 LIGEL 729
++ EL
Sbjct: 464 MVKEL 468
>gi|359321276|ref|XP_850331.3| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 3 [Canis lupus familiaris]
Length = 919
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|344264585|ref|XP_003404372.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Loxodonta africana]
Length = 869
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VK+N+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKNNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|296932852|gb|ADH93570.1| glutamate receptor form B [Homo sapiens]
Length = 869
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|149059772|gb|EDM10655.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_i [Rattus
norvegicus]
Length = 598
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 306/592 (51%), Gaps = 61/592 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 598
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 516 MVKELIDH 523
>gi|332218571|ref|XP_003258428.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 4
[Nomascus leucogenys]
Length = 859
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 296/556 (53%), Gaps = 35/556 (6%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF AV IN++ + L P+ L Q + YDS +K C+ S G+AAIFGP +
Sbjct: 7 AFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSS 65
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKGISVIINDMDWDT 135
N ++S+C +PH++ W K+ + N V++YP+ +S+ I ++ W T
Sbjct: 66 ANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKT 122
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
T++Y+ L+ LQ++++ + ++ IRQLP DT D +PLLKE+K E
Sbjct: 123 VTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPADTKDAKPLLKEMKRGKEF 175
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
H++ DCS + ILKQA + +M +Y +YI + ++ +D + ++ N+T R
Sbjct: 176 HVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFALDVEPYRYSGVNMTGFR 231
Query: 256 MINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALMYDAVYLFAAALQSLGER 313
++N N + SI+ W E + + + + +AALMYDAV++ + A+Q +
Sbjct: 232 ILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQM 291
Query: 314 KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
+ L C W+ G +L+K +G+TGRI + G R F L+ + +
Sbjct: 292 TV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEG 349
Query: 374 WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+ +GTW+ A GLN + + + + + NR+L VT+ EPY++
Sbjct: 350 LEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT---------ILEEPYVLFKKS 400
Query: 434 TGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
LYG Y +DL++ ++ L FTY+ L + YG + G+WNG++ EL + +
Sbjct: 401 DKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHK 460
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLA+ L IT R +DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+
Sbjct: 461 ADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILL 520
Query: 548 AYLGVSLLLFFLARIS 563
AYLGVS +LF +AR S
Sbjct: 521 AYLGVSCVLFVIARFS 536
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 580 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 639
Query: 814 STRNFFK 820
+T FFK
Sbjct: 640 ATMTFFK 646
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 646 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 703
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 704 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 746
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 392 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 451
Query: 725 LIGEL 729
++ EL
Sbjct: 452 MVREL 456
>gi|149046910|gb|EDL99658.1| rCG58533, isoform CRA_a [Rattus norvegicus]
Length = 869
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|403293062|ref|XP_003937542.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Saimiri
boliviensis boliviensis]
Length = 919
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + +AE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----KAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|3287965|sp|P42260.2|GRIK2_RAT RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Glutamate receptor 6;
Short=GluR-6; Short=GluR6; Flags: Precursor
gi|149046911|gb|EDL99659.1| rCG58533, isoform CRA_b [Rattus norvegicus]
Length = 908
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|26339462|dbj|BAC33402.1| unnamed protein product [Mus musculus]
gi|148665931|gb|EDK98347.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_e [Mus
musculus]
Length = 589
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 303/582 (52%), Gaps = 46/582 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGS 566
P +FSFL PLS D+W+Y+ A LGVS +LF +ARIS S
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARISMES 588
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 501 MVKELIDH 508
>gi|126330386|ref|XP_001380859.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Monodelphis
domestica]
Length = 919
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 311/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVENPHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWCPADGLNITEIAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M L+G Y +DL+K +A+ L FTY+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDMTLFGNDRFEGYCIDLLKELAHILGFTYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQD-EKGQWNGMIKELIDHKADLAVAPLTITHIREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPGVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTAIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L FTY+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDMTLFGNDRFEGYCIDLLKELAHILGFTYEIRLVEDGKYGAQD-EKGQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|345327231|ref|XP_001510480.2| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Ornithorhynchus anatinus]
Length = 900
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 308/576 (53%), Gaps = 37/576 (6%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPVDSDDARPLLKEMKRGREFRIIFDCSHSMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSL--NVRAETV 289
++ + +D + ++ N+T R++N NPH+ +I+ W E + + + +
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVENPHVSAIVEKWSMERLQAAPRVESGMLDGVM 319
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 320 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 375
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ V D + +G W+ A GLN + + + + NR+
Sbjct: 376 GRIVFNKTSGLRTDFDLDIVSLKEDGLEKVGIWSPADGLNITEITKGRGPNVTDSLTNRS 435
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
L VT+ + V+F+ + E E G+ +DL+K +A+ L FTY L + YG
Sbjct: 436 LIVTT-VLEEPFVMFRKSDRALFGNERFE--GFCIDLLKELAHILGFTYDIRLAEDGKYG 492
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP
Sbjct: 493 AQDDK-GQWNGMIKELIDHKADLAVAPLTITHIREKAIDFSKPFMTLGVSILYRKPNGTN 551
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 552 PGVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIVISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EGV+R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGVQRALT--ADYALLMESTAIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGL+DSKGYG+ P
Sbjct: 754 TQIGGLIDSKGYGVGTP 770
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G + +DL+K +A+ L FTY L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRALFGNERFEGFCIDLLKELAHILGFTYDIRLAEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|291408780|ref|XP_002720695.1| PREDICTED: Glutamate receptor, ionotropic kainate 3-like
[Oryctolagus cuniculus]
Length = 919
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 308/578 (53%), Gaps = 49/578 (8%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 40 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 98
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 99 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 156
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 157 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 207
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS V ILKQA + +M +Y ++I + ++
Sbjct: 208 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAVQILKQAMAMGMMTEYYHFIFTT----LD 263
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSL--NVRAETVKIEA 293
+ +D + ++ N+T R++N NPH+ +I+ W E + + + + +A
Sbjct: 264 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRVESGLLDGVMMTDA 323
Query: 294 ALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
AL+YDAV++ + Q R P T L C +W+ G N +K +G+TGRI
Sbjct: 324 ALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIV 379
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ +G R F L+ + D + +G W+ A GLN + + + + NR+L VT
Sbjct: 380 FNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVT 439
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ VL EP++M LYG Y +DL+K +++ L F+Y+ L +
Sbjct: 440 T-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELSHILGFSYEIRLVEDGK 490
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP
Sbjct: 491 YGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNG 549
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 550 TNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +++ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELSHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|39645633|gb|AAH63814.1| GRIK2 protein [Homo sapiens]
Length = 583
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 303/575 (52%), Gaps = 41/575 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIAR 583
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|158257362|dbj|BAF84654.1| unnamed protein product [Homo sapiens]
Length = 583
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 303/575 (52%), Gaps = 41/575 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVDSGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIAR 583
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|300796362|ref|NP_001179992.1| glutamate receptor, ionotropic kainate 2 [Bos taurus]
gi|426234623|ref|XP_004011292.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1 [Ovis
aries]
Length = 908
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|348571485|ref|XP_003471526.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Cavia
porcellus]
Length = 1084
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 205 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 263
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 264 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 321
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 322 ASLSHAILDLVQHLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 372
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 373 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 428
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 429 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAA----PRAESGLLDGVM 484
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 485 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 540
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 541 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 600
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L +T+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 601 LIITT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 651
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 652 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 710
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 711 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 752
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 796 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 855
Query: 814 STRNFFK 820
+T FFK
Sbjct: 856 ATMTFFK 862
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 862 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 918
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGL+DSKGYGI P
Sbjct: 919 TQIGGLIDSKGYGIGTP 935
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 609 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 667
Query: 725 LIGEL 729
++ EL
Sbjct: 668 MVKEL 672
>gi|426234627|ref|XP_004011294.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3 [Ovis
aries]
Length = 893
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|301779724|ref|XP_002925279.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 3
[Ailuropoda melanoleuca]
gi|338710690|ref|XP_003362401.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Equus caballus]
Length = 869
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|149722834|ref|XP_001503964.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Equus caballus]
gi|301779720|ref|XP_002925277.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 1
[Ailuropoda melanoleuca]
Length = 908
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|126153354|gb|AAI31640.1| Grik2 protein [Mus musculus]
Length = 874
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|426215188|ref|XP_004001856.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Ovis aries]
Length = 973
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAA----PRAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 371
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 372 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSL 431
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+
Sbjct: 432 TNRSLIVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYE 482
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 483 IRLVEDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 541
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
+I EL
Sbjct: 503 MIKEL 507
>gi|301779722|ref|XP_002925278.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 2
[Ailuropoda melanoleuca]
Length = 893
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|345778256|ref|XP_539059.3| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Canis lupus familiaris]
Length = 908
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|301618517|ref|XP_002938663.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Xenopus
(Silurana) tropicalis]
Length = 845
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 306/578 (52%), Gaps = 49/578 (8%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GP + V+ AF + IN++ + L P+ L +Q + YDS +
Sbjct: 11 GIFEHLEGPTGQLVSAEEQAFRFSASIINRN-RTLLPNTTLTYDIQRINLYDSFEANRKA 69
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP + N ++S+C ++PH++ W + + VN+YP+
Sbjct: 70 CDQLALGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRW--KHHPLDNRDSFYVNLYPDY 127
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 128 ASLSHAILDLVQFLKWRSATVVYDDSTGLIRLQELI---------MAPARYNIRLKIRQL 178
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PP+++D RPLLKE+K E I+ DCS IL+QA + +M +Y +YI + ++
Sbjct: 179 PPESEDARPLLKEMKRGREFRIIFDCSHTMAAQILRQAMAMGMMTEYYHYIFTT----LD 234
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKIEA 293
+ +D + ++ N+T R++N NP++ SI++ W E ++ + + +A
Sbjct: 235 LYALDLEPYRYSGVNLTGFRILNVDNPYVSSIVDKWSMERHQATPKPESGLLDGIMTTDA 294
Query: 294 ALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
AL YDAV++ + Q R P T L C +W+ G N +K +G+TGRI
Sbjct: 295 ALTYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGSRFMNFIKEAQWEGLTGRIV 350
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ +G R F L+ + D + +GTWN + GLN + T E + NRTL VT
Sbjct: 351 FNKTSGLRTDFDLDIISLKEDGLEKVGTWNPSDGLNITETARGRGPNISESLTNRTLIVT 410
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ VL EPY+M L+G + +DL+K IA L F Y L +
Sbjct: 411 T-------VL--EEPYVMFKRSDTPLFGKDRFEGFCIDLLKKIAEILGFDYDIRLVEDAK 461
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG+ + + G+WNGL+ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRK
Sbjct: 462 YGSQD-EKGQWNGLVKELIDHKADLAVAPLTITHVREKVIDFSKPFMTLGISILYRKANG 520
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 521 TAPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 558
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM I + +DLAK +I+YG V G
Sbjct: 602 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESAIDSADDLAKQTKIEYGAVVDG 661
Query: 814 STRNFFK 820
+T NFFK
Sbjct: 662 ATMNFFK 668
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S++S +++M + M SSRPS VKSN+EG++RV+ YA MEST IEY ++NC+L
Sbjct: 668 KKSHISTFEKMWAFM-SSRPSALVKSNEEGIQRVLS--ADYALLMESTAIEYITQRNCNL 724
Query: 633 MQVGGLLDSKGYGIA---MPTSKFL 654
Q+GGL+DSKGYGI +PTS L
Sbjct: 725 TQIGGLIDSKGYGIGTPMVPTSSLL 749
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G + +DL+K IA L F Y L + YG+ + + G+WNG
Sbjct: 415 EPYVMFKRSDTPLFGKDRFEGFCIDLLKKIAEILGFDYDIRLVEDAKYGSQD-EKGQWNG 473
Query: 725 LIGEL 729
L+ EL
Sbjct: 474 LVKEL 478
>gi|426234625|ref|XP_004011293.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2 [Ovis
aries]
Length = 869
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|345778260|ref|XP_003431710.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Canis lupus familiaris]
Length = 869
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|338710688|ref|XP_003362400.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Equus caballus]
Length = 893
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|345778258|ref|XP_003431709.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Canis lupus familiaris]
Length = 893
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|148673104|gb|EDL05051.1| glutamate receptor, ionotropic, kainate 2 (beta 2), isoform CRA_a
[Mus musculus]
Length = 869
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|335291005|ref|XP_003356363.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Sus
scrofa]
Length = 936
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 57 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 115
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 116 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 173
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 174 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 224
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 225 PLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 280
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 281 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 336
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 337 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 392
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 393 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSLTNRS 452
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+ L
Sbjct: 453 LIVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLV 503
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 504 EDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 562
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 563 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 604
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 648 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 707
Query: 814 STRNFFK 820
+T FFK
Sbjct: 708 ATMTFFK 714
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 714 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 770
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 771 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 804
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 461 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 519
Query: 725 LIGEL 729
+I EL
Sbjct: 520 MIKEL 524
>gi|122065194|sp|P39087.4|GRIK2_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Glutamate receptor 6;
Short=GluR-6; Short=GluR6; AltName: Full=Glutamate
receptor beta-2; Short=GluR beta-2; Flags: Precursor
gi|148673105|gb|EDL05052.1| glutamate receptor, ionotropic, kainate 2 (beta 2), isoform CRA_b
[Mus musculus]
Length = 908
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 304/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|281354574|gb|EFB30158.1| hypothetical protein PANDA_014739 [Ailuropoda melanoleuca]
Length = 870
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 301/573 (52%), Gaps = 41/573 (7%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP E AF AV IN++ + L P+ L Q + YDS +K C+
Sbjct: 2 GIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACD 59
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N V++YP+
Sbjct: 60 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFS 116
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQLP D
Sbjct: 117 SLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPAD 169
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
T D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + ++
Sbjct: 170 TKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFA 225
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALM 296
+D + ++ N+T R++N N + SI+ W E + + + + +AALM
Sbjct: 226 LDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALM 285
Query: 297 YDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
YDAV++ + +Q + + L C W+ G +L+K +G+TGRI +
Sbjct: 286 YDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTN 343
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 344 GLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT---- 399
Query: 417 KLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLN 470
EPY++ LYG Y +DL++ ++ L FTY+ L + YG +
Sbjct: 400 -----ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQD 454
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP P +
Sbjct: 455 DANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGV 514
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 515 FSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 547
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 591 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 650
Query: 814 STRNFFK 820
+T FFK
Sbjct: 651 ATMTFFK 657
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 657 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 714
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 715 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 757
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 403 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 462
Query: 725 LIGEL 729
++ EL
Sbjct: 463 MVREL 467
>gi|397489050|ref|XP_003815550.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Pan paniscus]
Length = 1191
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 57/586 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 308 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 366
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 367 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 424
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 425 YPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 475
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 476 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 533
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 534 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAA----PRAESGLL 587
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 588 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 643
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + + +
Sbjct: 644 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEIAKGRGPNVTDSL 703
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 704 TNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYE 754
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+S
Sbjct: 755 IRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVS 813
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 814 ILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 859
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 903 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 962
Query: 814 STRNFFK 820
+T FFK
Sbjct: 963 ATMTFFK 969
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 969 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 1025
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 1026 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 1059
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + G+WNG
Sbjct: 716 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQD-DKGQWNG 774
Query: 725 LIGEL 729
++ EL
Sbjct: 775 MVKEL 779
>gi|440908123|gb|ELR58181.1| Glutamate receptor, ionotropic kainate 3, partial [Bos grunniens
mutus]
Length = 881
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 2 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 60
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 61 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 118
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 119 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 169
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 170 PLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 225
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 226 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 281
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 282 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 337
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 338 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSLTNRS 397
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+ L
Sbjct: 398 LIVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLV 448
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 449 EDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 507
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 508 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 549
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 593 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 652
Query: 814 STRNFFK 820
+T FFK
Sbjct: 653 ATMTFFK 659
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 659 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 715
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 716 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 749
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 406 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 464
Query: 725 LIGEL 729
+I EL
Sbjct: 465 MIKEL 469
>gi|449273128|gb|EMC82736.1| Glutamate receptor, ionotropic kainate 3, partial [Columba livia]
Length = 894
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 306/576 (53%), Gaps = 49/576 (8%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + ++ AF + IN++ + L P+ L +Q + +DS K
Sbjct: 5 GIFEYADGPNTQVMSAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 63
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 64 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 121
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 122 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 172
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P DTDD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 173 PLDTDDARPLLKEMKRGREFRIIFDCSHLMAAQILKQAMAMGMMTEYYHFIFTT----LD 228
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG--RSLNVRAETVKIEA 293
+ +D + ++ N+T R++N NPH+ SI+ W E + L + + +A
Sbjct: 229 LYALDLEPYRYSGVNLTGFRILNVENPHVSSIIEKWSMERLQSAPKAELGLLDGVMMTDA 288
Query: 294 ALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
AL+YDAV++ + Q R P T L C +W+ G N +K +G+TGRI
Sbjct: 289 ALLYDAVHVVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIV 344
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ +G R F L+ + D + +G W+ + GLN + + + + NR+L VT
Sbjct: 345 FNKTSGLRTDFDLDIISLKEDGLEKVGAWSPSEGLNITEIAKGRGPNVTDSLSNRSLIVT 404
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ VL EP++M L+G Y +DL+K +A L F+Y+ L +
Sbjct: 405 T-------VL--EEPFVMFRKSDTALFGNDRFEGYCIDLLKELAIILGFSYEIRLVEDGK 455
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP
Sbjct: 456 YGAQD-EKGQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNG 514
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR
Sbjct: 515 TNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIAR 550
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 606 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 665
Query: 814 STRNFFK 820
+T FFK
Sbjct: 666 ATMTFFK 672
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+P+ VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 672 KKSKISTFEKMWAFM-SSKPTALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 728
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGI P S + K + +L+
Sbjct: 729 TQIGGLLDSKGYGIGTPMGSPYRDKITIAILQLQ 762
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A L F+Y+ L + YG + + G+WNG
Sbjct: 409 EPFVMFRKSDTALFGNDRFEGYCIDLLKELAIILGFSYEIRLVEDGKYGAQD-EKGQWNG 467
Query: 725 LIGEL 729
+I EL
Sbjct: 468 MIKEL 472
>gi|431838117|gb|ELK00049.1| Glutamate receptor, ionotropic kainate 2 [Pteropus alecto]
Length = 859
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 295/556 (53%), Gaps = 35/556 (6%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF AV IN++ + L P+ L Q + YDS +K C+ S G+AAIFGP +
Sbjct: 7 AFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSS 65
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKGISVIINDMDWDT 135
N ++S+C +PH++ W K+ + N V++YP+ +S+ I ++ W T
Sbjct: 66 ANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKT 122
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
T++Y+ L+ LQ++++ + ++ IRQLP DT D +PLLKE+K E
Sbjct: 123 VTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPADTKDAKPLLKEMKRGKEF 175
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
H++ DCS + ILKQA + +M +Y +YI + ++ +D + ++ N+T R
Sbjct: 176 HVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFALDVEPYRYSGVNMTGFR 231
Query: 256 MINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALMYDAVYLFAAALQSLGER 313
++N N + SI+ W E + + + + +AALMYDAV++ + +Q +
Sbjct: 232 ILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVGVQQFPQM 291
Query: 314 KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
+ L C W+ G +L+K +G+TGRI + G R F L+ + +
Sbjct: 292 TV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEG 349
Query: 374 WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+ +GTW+ A GLN + + + + + NR+L VT+ EPY++
Sbjct: 350 LEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT---------ILEEPYVLFKKS 400
Query: 434 TGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
LYG Y +DL++ ++ L FTY+ L + YG + G+WNG++ EL + +
Sbjct: 401 DKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHK 460
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLA+ L IT R +DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+
Sbjct: 461 ADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILL 520
Query: 548 AYLGVSLLLFFLARIS 563
AYLGVS +LF +AR S
Sbjct: 521 AYLGVSCVLFVIARFS 536
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 580 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 639
Query: 814 STRNFFK 820
+T FFK
Sbjct: 640 ATMTFFK 646
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 646 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 703
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 704 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 746
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 392 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 451
Query: 725 LIGEL 729
++ EL
Sbjct: 452 MVREL 456
>gi|363732091|ref|XP_426186.3| PREDICTED: glutamate receptor, ionotropic kainate 2 [Gallus gallus]
Length = 915
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 304/580 (52%), Gaps = 40/580 (6%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFECVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYI---LSLTS 231
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI L +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLVMFI 263
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETV 289
++ + +D + ++ N+T R++N N + SI+ W E + + + +
Sbjct: 264 FFTDLFALDVEPYRYSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFM 323
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGR
Sbjct: 324 TTDAALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGR 381
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I + G R F L+ + + + +GTW+ GLN + + + + NR+L
Sbjct: 382 ITFNKSNGLRTDFDLDVISLKEEGLEKVGTWDPLSGLNMTENQKGKPANITDSLSNRSLI 441
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
VT+ EPY+M LYG Y +DL++ ++ L F+Y+ L +
Sbjct: 442 VTT---------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVED 492
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 493 GKYGAQEDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKP 552
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 553 NGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 592
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 636 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 695
Query: 814 STRNFFK 820
+T FFK
Sbjct: 696 ATMTFFK 702
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 702 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 759
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 760 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 802
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L F+Y+ L + YG +G+WNG
Sbjct: 448 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVEDGKYGAQEDASGQWNG 507
Query: 725 LIGEL 729
++ EL
Sbjct: 508 MVREL 512
>gi|354492085|ref|XP_003508182.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Cricetulus griseus]
Length = 897
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 301/573 (52%), Gaps = 41/573 (7%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP E AF AV IN++ + L P+ L Q + YDS +K C+
Sbjct: 29 GIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACD 86
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N V++YP+
Sbjct: 87 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFS 143
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQLP D
Sbjct: 144 SLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPAD 196
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
T D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + ++
Sbjct: 197 TRDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFA 252
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALM 296
+D + ++ N+T R++N N + SI+ W E + + + + +AALM
Sbjct: 253 LDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALM 312
Query: 297 YDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
YDAV++ + A+Q + + L C W+ G +L+K +G+TGRI +
Sbjct: 313 YDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTN 370
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R F L+ + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 371 GLRTDFDLDVISLKEEGLDKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT---- 426
Query: 417 KLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLN 470
EPY++ LYG Y +DL++ ++ L FTY+ L + YG +
Sbjct: 427 -----ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQD 481
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP P +
Sbjct: 482 DVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGV 541
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 FSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 574
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 618 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 677
Query: 814 STRNFFK 820
+T FFK
Sbjct: 678 ATMTFFK 684
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 684 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 741
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 742 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 784
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 430 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 489
Query: 725 LIGEL 729
++ EL
Sbjct: 490 MVREL 494
>gi|351714209|gb|EHB17128.1| Glutamate receptor, ionotropic kainate 3 [Heterocephalus glaber]
Length = 947
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 68 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 126
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 127 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 184
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S+ I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 185 ASLSQAILDLVQHLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 235
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 236 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 291
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 292 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 347
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 348 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 403
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 404 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 463
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 464 LIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 514
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 515 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 573
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 574 KSNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 615
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 659 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 718
Query: 814 STRNFFK 820
+T FFK
Sbjct: 719 ATMTFFK 725
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 725 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 781
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGL+DSKGYGI P
Sbjct: 782 TQIGGLIDSKGYGIGTP 798
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 472 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 530
Query: 725 LIGEL 729
++ EL
Sbjct: 531 MVKEL 535
>gi|3287850|sp|Q60934.2|GRIK1_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Glutamate receptor 5;
Short=GluR-5; Short=GluR5; Flags: Precursor
Length = 836
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|122063506|sp|Q38PU3.1|GRIK2_MACFA RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Glutamate receptor 6;
Short=GluR-6; Short=GluR6; Flags: Precursor
gi|76574780|gb|ABA47258.1| GluR6 [Macaca fascicularis]
Length = 908
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|395518506|ref|XP_003763401.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Sarcophilus
harrisii]
Length = 937
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/575 (32%), Positives = 305/575 (53%), Gaps = 38/575 (6%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
+++ GIF E E AF+ AV IN++ + L + L +Q + +DS ++
Sbjct: 71 IRVGGIFETAENEAVNVEELAFKFAVTNINRN-RTLILNNTLTYDIQRINLFDSFEASRR 129
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP I + + ++S+C ++PH++ W + N + +N+YP+
Sbjct: 130 ACDQLALGVAALFGPSHISSVSAVQSICNALEVPHIQTHWKHPT--MDKNDMFYINLYPD 187
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
S+ + +I +W T++YE + L+ LQ++++ + +I+ IRQLP
Sbjct: 188 YAAFSRAVLDLILYYNWKIVTVVYEDNTGLIRLQELIKAPSKYNIKIK-------IRQLP 240
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K +E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 241 SGNKDAKPLLKEMKKGNEFYVIFDCSYEMAAEILKQILFMGMMTEYYHYFFTTLDFF--- 297
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKIEAA 294
+D + ++ N+T R++N NP + SI+ W E + + + + EAA
Sbjct: 298 -ALDLEIYRYSGVNMTGFRLLNIDNPRVSSIIEKWSVERLQAVPKSEMGLLNGMMTTEAA 356
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAVY A A+ S + + L C W+ G NL++ +DG+TGRI +
Sbjct: 357 LMYDAVY--AVAIASHQASQMTISSLQCHRHKPWRFGHRFINLIREAQLDGLTGRITFNK 414
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + + K +G WN+ GLN S + ++ + + NRTL VT+
Sbjct: 415 TDGLRKDFDLDIISLKEEGTKKIGIWNSNSGLNMSDSHKEKSTNITDSLANRTLIVTT-- 472
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
EPY+M LYG Y +DL+K +++ L F Y L + YG
Sbjct: 473 -------ILEEPYVMFKKSDKPLYGNNRFEGYCLDLLKELSSILGFIYDVKLVSDGKYGA 525
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 526 QNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 584
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 585 GVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 619
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 663 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 722
Query: 814 STRNFFK 820
ST FFK
Sbjct: 723 STMTFFK 729
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 729 KKSKISTYEKMWAFMNSRQQTALVKKNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 786
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 787 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 829
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K +++ L F Y L + YG N + G+WNG
Sbjct: 476 EPYVMFKKSDKPLYGNNRFEGYCLDLLKELSSILGFIYDVKLVSDGKYGAQNDK-GEWNG 534
Query: 725 LIGEL 729
++ EL
Sbjct: 535 MVKEL 539
>gi|301779585|ref|XP_002925210.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Ailuropoda melanoleuca]
Length = 940
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 308/582 (52%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 61 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 119
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 120 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 177
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 178 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 228
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 229 PLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 284
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 285 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 340
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 341 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 396
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ GLN + + + + NR+
Sbjct: 397 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPTEGLNITEVAKGRGPNVTDSLTNRS 456
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+ L
Sbjct: 457 LVVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLV 507
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 508 EDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 566
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 567 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 608
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
V A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK RI+YG V
Sbjct: 649 LVPRALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTRIEYGAV 708
Query: 811 EMGSTRNFFK 820
+ G+T FFK
Sbjct: 709 KDGATMTFFK 718
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 718 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 774
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 775 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 808
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 465 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 523
Query: 725 LIGEL 729
+I EL
Sbjct: 524 MIKEL 528
>gi|291400955|ref|XP_002716831.1| PREDICTED: glutamate receptor, ionotropic, kainate 1-like isoform 3
[Oryctolagus cuniculus]
Length = 934
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 303/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R +F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKNFDLDIISLKEEGTEKIGIWNSNSGLNMTEGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|84000015|ref|NP_666184.2| glutamate receptor ionotropic, kainate 1 isoform a precursor [Mus
musculus]
gi|26335749|dbj|BAC31575.1| unnamed protein product [Mus musculus]
Length = 934
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|148665932|gb|EDK98348.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_f [Mus
musculus]
Length = 934
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|296231997|ref|XP_002761391.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Callithrix jacchus]
Length = 905
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G L+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMKLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|1169965|sp|P42264.1|GRIK3_RAT RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Glutamate receptor 7;
Short=GluR-7; Short=GluR7; Flags: Precursor
gi|471274|emb|CAA77779.1| kainate receptor [Rattus norvegicus]
Length = 919
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 306/584 (52%), Gaps = 53/584 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N N H+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNAHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AAL+YDAV++ + Q + L C W+ G N +K +G
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQRASQMTV--NSLQCHRHKPWRFGGRFMNFIKEAQWEG 373
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TGRI + +G R F L+ + D + +G W+ A GLN + + + + N
Sbjct: 374 LTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTN 433
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
R+L VT+ EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 434 RSLIVTT---------LLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIR 484
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SIL
Sbjct: 485 LVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSIL 543
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
YRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 544 YRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|449489057|ref|XP_002195325.2| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Taeniopygia guttata]
Length = 1033
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 308/578 (53%), Gaps = 49/578 (8%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + ++ AF + IN++ + L P+ L +Q + +DS K
Sbjct: 154 GIFEYADGPNTQVMSAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 212
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 213 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 270
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 271 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 321
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P DTDD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 322 PLDTDDARPLLKEMKRGREFRIIFDCSHLMAAQILKQAMAMGMMTEYYHFIFTT----LD 377
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYE--ENERGRSLNVRAETVKIEA 293
+ +D + ++ N+T R++N NPH+ SI+ W E ++ L + + +A
Sbjct: 378 LYALDLEPYRYSGVNLTGFRILNVENPHVSSIIEKWSMERLQSAPKAELGLLDGVMMTDA 437
Query: 294 ALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
AL+YDAV++ + Q R P T L C +W+ G N +K +G+TGRI
Sbjct: 438 ALLYDAVHVVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIV 493
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ +G R F L+ + D + +G W+ + GLN + + + + NR+L VT
Sbjct: 494 FNKTSGLRTDFDLDIISLKEDGLEKVGAWSPSDGLNITEISKGRGPNVTDSLSNRSLIVT 553
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ VL EP++M L+G Y +DL+K +A L F+Y+ L +
Sbjct: 554 T-------VL--EEPFVMFRKSDTALFGNDRFEGYCIDLLKELAIILGFSYEIRLVEDGK 604
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP
Sbjct: 605 YGAQD-EKGQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNG 663
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 664 TNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 701
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 745 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 804
Query: 814 STRNFFK 820
+T FFK
Sbjct: 805 ATMTFFK 811
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+P+ VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 811 KKSKISTFEKMWAFM-SSKPTALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 867
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+D+KGYGI P S + K + +L+
Sbjct: 868 TQIGGLIDTKGYGIGTPMGSPYRDKITIAILQLQ 901
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A L F+Y+ L + YG + + G+WNG
Sbjct: 558 EPFVMFRKSDTALFGNDRFEGYCIDLLKELAIILGFSYEIRLVEDGKYGAQD-EKGQWNG 616
Query: 725 LIGEL 729
+I EL
Sbjct: 617 MIKEL 621
>gi|2598978|gb|AAC53462.1| kainate receptor GluR7b [Rattus norvegicus]
Length = 910
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 306/584 (52%), Gaps = 53/584 (9%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 36 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 94
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 95 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 152
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 153 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 203
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 204 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 261
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N N H+ +I+ W E + RAE+
Sbjct: 262 --LDLYALDLEPYRYSGVNLTGFRILNVDNAHVSAIVEKWSMERLQAAP----RAESGLL 315
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AAL+YDAV++ + Q + L C W+ G N +K +G
Sbjct: 316 DGVMMTDAALLYDAVHIVSVCYQRASQMTV--NSLQCHRHKPWRFGGRFMNFIKEAQWEG 373
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TGRI + +G R F L+ + D + +G W+ A GLN + + + + N
Sbjct: 374 LTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTN 433
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
R+L VT+ EP++M LYG Y +DL+K +A+ L F+Y+
Sbjct: 434 RSLIVTT---------LLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIR 484
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SIL
Sbjct: 485 LVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSIL 543
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
YRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 544 YRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|332229401|ref|XP_003263878.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Nomascus leucogenys]
Length = 905
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSISAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLVV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|426392768|ref|XP_004062712.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Gorilla gorilla gorilla]
Length = 934
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|26335229|dbj|BAC31315.1| unnamed protein product [Mus musculus]
Length = 900
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|291400953|ref|XP_002716830.1| PREDICTED: glutamate receptor, ionotropic, kainate 1-like isoform 2
[Oryctolagus cuniculus]
Length = 905
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 303/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R +F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKNFDLDIISLKEEGTEKIGIWNSNSGLNMTEGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|441672214|ref|XP_004092342.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Nomascus
leucogenys]
Length = 934
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSISAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLVV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|426392766|ref|XP_004062711.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Gorilla gorilla gorilla]
Length = 905
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|28416444|ref|NP_783300.1| glutamate receptor ionotropic, kainate 1 isoform 2 precursor [Homo
sapiens]
gi|397484146|ref|XP_003813241.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3 [Pan
paniscus]
gi|17384609|emb|CAC80546.1| glutamate receptor subunit GluR5 [Homo sapiens]
gi|119630311|gb|EAX09906.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_a [Homo
sapiens]
gi|157169988|gb|AAI52728.1| Glutamate receptor, ionotropic, kainate 1 [synthetic construct]
gi|162319352|gb|AAI56976.1| Glutamate receptor, ionotropic, kainate 1 [synthetic construct]
Length = 905
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|109065575|ref|XP_001100677.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 3
[Macaca mulatta]
Length = 905
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|281344418|gb|EFB20002.1| hypothetical protein PANDA_014659 [Ailuropoda melanoleuca]
Length = 881
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 308/582 (52%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 2 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 60
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 61 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 118
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 119 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 169
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 170 PLDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 225
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+ +
Sbjct: 226 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 281
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 282 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 337
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ GLN + + + + NR+
Sbjct: 338 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPTEGLNITEVAKGRGPNVTDSLTNRS 397
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+ L
Sbjct: 398 LVVTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLV 448
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 449 EDGKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 507
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 508 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 549
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
V A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK RI+YG V
Sbjct: 590 LVPRALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTRIEYGAV 649
Query: 811 EMGSTRNFFK 820
+ G+T FFK
Sbjct: 650 KDGATMTFFK 659
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 659 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 715
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 716 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 749
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 406 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 464
Query: 725 LIGEL 729
+I EL
Sbjct: 465 MIKEL 469
>gi|297707738|ref|XP_002830641.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Pongo abelii]
Length = 905
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYVVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|83999995|ref|NP_034478.1| glutamate receptor ionotropic, kainate 1 isoform b precursor [Mus
musculus]
gi|74227392|dbj|BAE21774.1| unnamed protein product [Mus musculus]
Length = 905
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|350592120|ref|XP_003483397.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2 [Sus
scrofa]
Length = 905
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 303/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI++ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIDKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|348562853|ref|XP_003467223.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 2
[Cavia porcellus]
Length = 934
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 303/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNLEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQA----PPRPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + ++ + + NRTL V
Sbjct: 377 IFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGHKEKTNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSRISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|26335871|dbj|BAC31636.1| unnamed protein product [Mus musculus]
Length = 903
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 300/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAAFFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|9506755|ref|NP_062182.1| glutamate receptor ionotropic, kainate 2 precursor [Rattus
norvegicus]
gi|56282|emb|CAA77647.1| glutamate receptor subunit (GluR6) kainate subtype [Rattus
norvegicus]
Length = 908
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|403271661|ref|XP_003927734.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Saimiri
boliviensis boliviensis]
Length = 918
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 306/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E + AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENDPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLLKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|348562851|ref|XP_003467222.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Cavia porcellus]
Length = 905
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 303/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNLEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + ++ + + NRTL V
Sbjct: 377 IFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGHKEKTNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSRISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|56280|emb|CAA77778.1| kainate receptor [Rattus norvegicus]
Length = 908
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|227861|prf||1712322A Glu receptor
Length = 884
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|348562855|ref|XP_003467224.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 3
[Cavia porcellus]
Length = 903
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 303/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNLEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + ++ + + NRTL V
Sbjct: 377 IFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGHKEKTNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSRISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|148665930|gb|EDK98346.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_d [Mus
musculus]
Length = 699
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 54/68 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFKV 821
ST FFKV
Sbjct: 689 STMTFFKV 696
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 501 MVKELIDH 508
>gi|148665928|gb|EDK98344.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_b [Mus
musculus]
Length = 903
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|221044710|dbj|BAH14032.1| unnamed protein product [Homo sapiens]
Length = 859
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 295/556 (53%), Gaps = 35/556 (6%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF AV IN++ + L P+ L Q + YDS +K C+ S G+AAIFGP +
Sbjct: 7 AFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSS 65
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKGISVIINDMDWDT 135
N ++S+C +PH++ W K+ + N V++YP+ + + I ++ W T
Sbjct: 66 ANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFSSLGRAILDLVQFFKWKT 122
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
T++Y+ L+ LQ++++ + ++ IRQLP DT D +PLLKE+K E
Sbjct: 123 VTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPADTKDAKPLLKEMKRGKEF 175
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
H++ DCS + ILKQA + +M +Y +YI + ++ +D + ++ N+T R
Sbjct: 176 HVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFALDVEPYRYSGVNMTGFR 231
Query: 256 MINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALMYDAVYLFAAALQSLGER 313
++N N + SI+ W E + + + + +AALMYDAV++ + A+Q +
Sbjct: 232 ILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQM 291
Query: 314 KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
+ L C W+ G +L+K +G+TGRI + G R F L+ + +
Sbjct: 292 TV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEG 349
Query: 374 WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+ +GTW+ A GLN + + + + + NR+L VT+ EPY++
Sbjct: 350 LEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT---------ILEEPYVLFKKS 400
Query: 434 TGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
LYG Y +DL++ ++ L FTY+ L + YG + G+W+G++ EL + +
Sbjct: 401 DKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWSGMVRELIDHK 460
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLA+ L IT R +DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+
Sbjct: 461 ADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILL 520
Query: 548 AYLGVSLLLFFLARIS 563
AYLGVS +LF +AR S
Sbjct: 521 AYLGVSCVLFVIARFS 536
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP + + E + F + +++ + +A+STR+V G
Sbjct: 530 FVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALSTRIVGG 589
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G+T FFK
Sbjct: 590 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFK 646
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 646 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 703
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 704 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 746
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+W+G
Sbjct: 392 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWSG 451
Query: 725 LIGEL 729
++ EL
Sbjct: 452 MVREL 456
>gi|148665927|gb|EDK98343.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_a [Mus
musculus]
Length = 751
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|426217179|ref|XP_004002831.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2 [Ovis
aries]
Length = 934
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|126153397|gb|AAI31641.1| Grik2 protein [Mus musculus]
Length = 874
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|431915242|gb|ELK15929.1| Glutamate receptor, ionotropic kainate 1 [Pteropus alecto]
Length = 876
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 298/575 (51%), Gaps = 46/575 (8%)
Query: 5 GIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++ C+
Sbjct: 12 GIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRRACDQ 70
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+ I
Sbjct: 71 LALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPDYAAI 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 129 SRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLPSGNK 181
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++ +D
Sbjct: 182 DAKPLLKEMKKGKEFYVIFDCSHETAAEILKQVLSMGMMTEYYHYFFTT----LDLFALD 237
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VKIEAA 294
+ ++ N+T R++N NP++ SI+ W E + R ET + +AA
Sbjct: 238 LELYRYSGVNMTGFRLLNIDNPYVSSIIEKWSMERLQAPP----RPETGLLDGMMTTDAA 293
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAVY+ A A + + L C W+ G NL+K DG+TGRI +
Sbjct: 294 LMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNK 351
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + D + +G WN+ GLN + + + NRTL VT+
Sbjct: 352 TDGLRKDFDLDIISLKEDGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIVTT-- 409
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
EPY+M LYG Y +DL+K ++N L F Y L + YG
Sbjct: 410 -------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGA 462
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 463 QNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 521
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 522 GVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 556
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 600 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 659
Query: 814 STRNFFK 820
ST FFK
Sbjct: 660 STMTFFK 666
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + +K++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 666 KKSKISTYEKMWAFMSSRQQTTLIKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 723
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 724 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 766
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 413 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 471
Query: 725 LIGEL 729
++ EL
Sbjct: 472 MVKEL 476
>gi|397484142|ref|XP_003813239.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1 [Pan
paniscus]
Length = 920
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|426392770|ref|XP_004062713.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Gorilla gorilla gorilla]
Length = 920
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|302564133|ref|NP_001181785.1| glutamate receptor, ionotropic kainate 1 [Macaca mulatta]
Length = 920
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|332229399|ref|XP_003263877.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Nomascus leucogenys]
Length = 918
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSISAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLVVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|296231995|ref|XP_002761390.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Callithrix jacchus]
Length = 920
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G L+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMKLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|163659881|ref|NP_001104738.1| glutamate receptor ionotropic, kainate 2 isoform 1 precursor [Mus
musculus]
Length = 908
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|224048376|ref|XP_002196529.1| PREDICTED: glutamate receptor, ionotropic kainate 2 [Taeniopygia
guttata]
Length = 908
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 301/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFECVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +G W+ GLN + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKVGIWDPLSGLNMTENQKGKPANITDSLSNRSLVVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY+M LYG Y +DL++ ++ L F+Y+ L + Y
Sbjct: 438 ---------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQEDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L F+Y+ L + YG +G+WNG
Sbjct: 441 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVEDGKYGAQEDASGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|332229397|ref|XP_003263876.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Nomascus leucogenys]
Length = 920
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSISAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLVVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|221041332|dbj|BAH12343.1| unnamed protein product [Homo sapiens]
Length = 920
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FK
Sbjct: 704 STMTLFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|220409|dbj|BAA00943.1| glutamate receptor channel subunit beta-2 [Mus musculus]
gi|737901|prf||1923384A Glu receptor:SUBUNIT=beta2
Length = 864
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|156523140|ref|NP_001095984.1| glutamate receptor, ionotropic kainate 1 [Bos taurus]
gi|126010639|gb|AAI33585.1| GRIK1 protein [Bos taurus]
Length = 905
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|296231993|ref|XP_002761389.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Callithrix jacchus]
Length = 918
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G L+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMKLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|109065571|ref|XP_001100491.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Macaca mulatta]
Length = 918
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|163659879|ref|NP_034479.2| glutamate receptor ionotropic, kainate 2 isoform 2 precursor [Mus
musculus]
Length = 869
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|4504117|ref|NP_000821.1| glutamate receptor ionotropic, kainate 1 isoform 1 precursor [Homo
sapiens]
gi|257796306|ref|NP_001158174.1| glutamate receptor, ionotropic kainate 1 [Pan troglodytes]
gi|397484144|ref|XP_003813240.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2 [Pan
paniscus]
gi|729597|sp|P39086.1|GRIK1_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Excitatory amino acid
receptor 3; Short=EAA3; AltName: Full=Glutamate receptor
5; Short=GluR-5; Short=GluR5; Flags: Precursor
gi|455448|gb|AAA52568.1| glutamate receptor [Homo sapiens]
gi|119630314|gb|EAX09909.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_c [Homo
sapiens]
gi|256997160|dbj|BAI22773.1| glutamate receptor, ionotropic, kainate 1 [Pan troglodytes]
Length = 918
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|354466198|ref|XP_003495561.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 2
[Cricetulus griseus]
Length = 934
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+I L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNITLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWRTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWHLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M L+G Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG + + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQDDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S S VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSREQSALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G Y +DL+K ++N L F Y L + YG + + G+WNG
Sbjct: 442 EPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|312494|emb|CAA46907.1| glutamate receptor subunit GluR6C [Mus musculus]
gi|182888467|gb|AAI60298.1| Glutamate receptor, ionotropic, kainate 2 (beta 2) [synthetic
construct]
Length = 869
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 303/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ + GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|426217177|ref|XP_004002830.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1 [Ovis
aries]
Length = 905
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|122063505|sp|Q38PU4.1|GRIK1_MACFA RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Glutamate receptor 5;
Short=GluR-5; Short=GluR5; Flags: Precursor
gi|76574778|gb|ABA47257.1| GluR5 [Macaca fascicularis]
Length = 918
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|297707736|ref|XP_002830640.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Pongo abelii]
Length = 920
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYVVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|291400951|ref|XP_002716829.1| PREDICTED: glutamate receptor, ionotropic, kainate 1-like isoform 1
[Oryctolagus cuniculus]
Length = 918
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 306/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R +F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKNFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTEGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYKKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|354466196|ref|XP_003495560.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Cricetulus griseus]
Length = 905
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+I L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNITLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWRTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWHLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M L+G Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG + + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQDDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS + + K S +S Y++M + M S S VK+N EG++RV+ YA MEST
Sbjct: 685 VKDGSTMTF-FKKSKISTYEKMWAFMSSREQSALVKNNDEGIQRVLTTD--YALLMESTS 741
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
IEY ++NC+L Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 742 IEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G Y +DL+K ++N L F Y L + YG + + G+WNG
Sbjct: 442 EPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|158260107|dbj|BAF82231.1| unnamed protein product [Homo sapiens]
Length = 908
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 302/577 (52%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
P DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 SPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LYG Y +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 489 GAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLACLGVSCVLFVIARFS 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK I+YG VE G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTEIEYGAVEDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSKISTYDKMWAFMSSGRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|426392772|ref|XP_004062714.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 4
[Gorilla gorilla gorilla]
Length = 918
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|301625419|ref|XP_002941901.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like, partial
[Xenopus (Silurana) tropicalis]
Length = 775
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 295/568 (51%), Gaps = 39/568 (6%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G FG E AF AV IN++ + L P+ L Q + YDS ++ C S G
Sbjct: 53 GPFGAEE----LAFRFAVNTINRN-RTLLPNTTLTYDTQRINLYDSFEASRKACEQLSLG 107
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKG 123
+AAIFGP + N ++S+C +PH++ W K+ + N V++YP+ +S+
Sbjct: 108 VAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFSSLSRA 164
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
I ++ W T TI Y+ L+ LQ++++ + ++ IRQLP DT D +
Sbjct: 165 ILDLVQFFKWKTVTIAYDDSTGLIRLQELIKAPSRYNLRLK-------IRQLPIDTKDAK 217
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
PLLKE+K E H++ DCS D ILKQA + +M +Y +YI + ++ +D +
Sbjct: 218 PLLKEMKRGKEFHVIFDCSHDMAAGILKQALAMGMMTEYYHYIFTT----LDLFALDVEP 273
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALMYDAVY 301
++ N+T R++N N + SI+ W E + + + + +AALMYDAV+
Sbjct: 274 YRYSGVNMTGFRILNIENSQVLSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVH 333
Query: 302 LFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNS 361
+ + A+Q + + L C W+ G +L+K +G+TGRI + G R
Sbjct: 334 VVSVAVQQFPQMTV--SSLQCNRHKPWRFGARFISLIKEAHWEGLTGRITFNKTNGLRTD 391
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
F L+ + + + +GTW+ GLN + + + + NR+L VT+
Sbjct: 392 FDLDVISLKEEGLEKIGTWDPTSGLNMTENQKGKPANITDSLSNRSLIVTT--------- 442
Query: 422 FQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
EPY+M LYG Y +DL++ ++ L F Y+ L + YG + T +
Sbjct: 443 ILEEPYVMFKKSDKPLYGKARFEGYCIDLLEKLSKILGFEYEVRLVEDGKYGAKDDTTQQ 502
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
WNG++ EL + +ADLA+ L IT R +DFT PFMTLGISILYRKP P +FSFL
Sbjct: 503 WNGMVRELMDHKADLAVAPLAITYVREQVIDFTKPFMTLGISILYRKPNGTNPGVFSFLN 562
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 563 PLSPDIWMYILLAYLGVSCVLFVIARFS 590
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 634 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVQDG 693
Query: 814 STRNFFK 820
+T FFK
Sbjct: 694 ATMTFFK 700
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S + Y++M + M S SV VK+N+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 700 KKSRIPTYEKMWAFMNSRSQSVLVKNNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 757
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGL+DSKGYG+ P
Sbjct: 758 TQIGGLIDSKGYGVGTP 774
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L F Y+ L + YG + T +WNG
Sbjct: 446 EPYVMFKKSDKPLYGKARFEGYCIDLLEKLSKILGFEYEVRLVEDGKYGAKDDTTQQWNG 505
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 506 MVRELMDH 513
>gi|350592122|ref|XP_003358953.2| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1 [Sus
scrofa]
Length = 918
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 306/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI++ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIDKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|26337847|dbj|BAC32609.1| unnamed protein product [Mus musculus]
Length = 598
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 305/593 (51%), Gaps = 63/593 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKY-FIPTNGVHGVNVYP 115
C+ + G+AA+FGP + + ++S+C ++PH++ W KY + + +N+YP
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRW---KYPSVDNRDLFYINLYP 152
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
+ IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQL
Sbjct: 153 DYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQL 205
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 206 PSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LD 261
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 262 LFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVM 317
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGR
Sbjct: 318 TTEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGR 375
Query: 350 INLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQ 394
I + G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 376 ITFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRD 435
Query: 395 MDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMI 448
+ + NRTL VT+ EPY+M LYG Y +DL+K +
Sbjct: 436 RSNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKEL 486
Query: 449 ANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFT 508
+N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 487 SNILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFS 545
Query: 509 MPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR
Sbjct: 546 KPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 598
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 516 MVKELIDH 523
>gi|296491634|tpg|DAA33667.1| TPA: glutamate receptor, ionotropic, kainate 1 [Bos taurus]
Length = 835
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 302/579 (52%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|301777524|ref|XP_002924182.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Ailuropoda melanoleuca]
Length = 905
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|296207508|ref|XP_002750728.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Callithrix
jacchus]
Length = 1126
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 309/582 (53%), Gaps = 57/582 (9%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 247 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 305
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 306 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 363
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 364 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 414
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 415 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 470
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------V 289
+ +D + ++ N+T R++N NPH+ +I+ W E + +AE+ +
Sbjct: 471 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----KAESGLLDGVM 526
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMT 347
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+T
Sbjct: 527 MTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLT 582
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + +G R F L+ + D + +G W+ A GLN + + + + NR+
Sbjct: 583 GRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRS 642
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ VL EP++M LYG Y +DL+K +A+ L F+Y+ L
Sbjct: 643 LIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLV 693
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYR
Sbjct: 694 EDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYR 752
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 753 KPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 794
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 838 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 897
Query: 814 STRNFFK 820
+T FFK
Sbjct: 898 ATMTFFK 904
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 904 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 960
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 961 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 994
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 651 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 709
Query: 725 LIGEL 729
++ EL
Sbjct: 710 MVKEL 714
>gi|297707734|ref|XP_002830639.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Pongo abelii]
Length = 918
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYVVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + + +
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDK 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SSNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|348534857|ref|XP_003454918.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Oreochromis niloticus]
Length = 882
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 308/575 (53%), Gaps = 45/575 (7%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP+ E AF+ A+ IN++ + L P+ L +Q + YDS ++ C+
Sbjct: 14 GIFESIESGPSGAE-ELAFKFALNTINRN-RTLLPNTTLTYDIQRINIYDSFEASRKACD 71
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N V V++YP+
Sbjct: 72 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKW---KHQVSDNRDVFYVSLYPDFS 128
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLP 176
+S+ I +++ W T T++Y+ L+ LQ++++ P R ++ IRQLP
Sbjct: 129 SLSRAILDLVHFFKWKTVTVVYDDSTGLIRLQELIK---------APSRYNIRLKIRQLP 179
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+T D +PLLKE+K E HI+ DC + ILKQA + +M +Y +YI + ++
Sbjct: 180 AETKDAKPLLKEMKRGKEFHIIFDCGHEMAAGILKQALAMGMMTEYYHYIFTT----LDL 235
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAA 294
+D + ++ N+T R++N N + SI+ W E + + + + +AA
Sbjct: 236 FALDVEPYRYSGVNMTGFRILNTENSQVASIIEKWSMERLQAPPKPDSGLLDGFMTTDAA 295
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAV++ A A+Q ++ + L C W+ G L+K DG+TGRI +
Sbjct: 296 LMYDAVHVVAVAVQQ--SQQITVSSLQCNRHKPWRFGNRFMALIKEAHWDGLTGRITFNR 353
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + + + +GTW+ GLN + + + + NR+L V++
Sbjct: 354 TNGLRTDFDLDVISLKEEGLEKIGTWDPPSGLNMTDNQKGKTTNVSDSLSNRSLVVST-- 411
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
EPY+M LYG Y +DL++ +AN L FT++ L + YG
Sbjct: 412 -------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELANILGFTFEVRLVEDGKYGV 464
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+ TG+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 465 QDENTGQWNGMVKELMDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 524
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 525 GVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 559
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 603 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGVVEDG 662
Query: 814 STRNFFK 820
+T FFK
Sbjct: 663 ATMTFFK 669
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K + +S Y +M M S R +V V + EG+ RV+ YAF MEST IE+ ++NC+L
Sbjct: 669 KKTKISTYDKMWEFMSSRRHTVMVNNVDEGIHRVLTSD--YAFLMESTTIEFVTQRNCNL 726
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSK YG+ P S + K + +L+ +G+ +MMK
Sbjct: 727 TQIGGLIDSKAYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 769
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ +AN L FT++ L + YG + TG+WNG
Sbjct: 415 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELANILGFTFEVRLVEDGKYGVQDENTGQWNG 474
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 475 MVKELMDH 482
>gi|338720717|ref|XP_001915295.2| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 1 [Equus caballus]
Length = 918
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRAAQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 IFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +D AK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDXAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK + EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKHSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|1169962|sp|P22756.3|GRIK1_RAT RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Glutamate receptor 5;
Short=GluR-5; Short=GluR5; Flags: Precursor
gi|56278|emb|CAA77777.1| kainate receptor [Rattus norvegicus]
Length = 949
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 304/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R +N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRKLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPCALGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEAYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|148665929|gb|EDK98345.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_c [Mus
musculus]
Length = 598
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 303/592 (51%), Gaps = 61/592 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGVMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 598
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 516 MVKELIDH 523
>gi|790530|gb|AAA95961.1| EAA3 [Homo sapiens]
Length = 905
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 301/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T ++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFGLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TG I
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + + NRTL V
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + V+++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|363728639|ref|XP_416697.3| PREDICTED: glutamate receptor, ionotropic kainate 1, partial
[Gallus gallus]
Length = 916
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 303/590 (51%), Gaps = 53/590 (8%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 35 LRIGGIFETVENEPVNIEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 93
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + +N+YP+
Sbjct: 94 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPT--VDHKDAFYINLYPD 151
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 152 YAAISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 204
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D RPLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 205 SGNKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTT----LDL 260
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKIEAA 294
+D + ++ N+T R++N NP + S++ W E + + + EAA
Sbjct: 261 FALDLEPYRYSGVNMTGFRLLNIENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAA 320
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAVY+ A A Q + + L C W+ G NL+K DG+TGRI +
Sbjct: 321 LMYDAVYMVAVASQRASQMTV--SSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNK 378
Query: 355 QTGRRNSFSLEFVEY-----------VSDQ----WKVLGTWNTAFGLNHSRTVEQMDKEK 399
G R F L+ + VS+ WK +G WN+ GLN + + +
Sbjct: 379 TDGLRKDFDLDIISLKEEGTEKAAGEVSNHLYKVWKKIGVWNSYSGLNMTDSNKDRSTNI 438
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELN 453
+ + NRTL VT+ +PY+M LYG Y +DL+K ++N L
Sbjct: 439 TDSLANRTLIVTT---------ILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILG 489
Query: 454 FTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMT 513
F Y+ L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMT
Sbjct: 490 FIYEVKLVSDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMT 548
Query: 514 LGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 549 LGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 598
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 642 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 701
Query: 814 STRNFFK 820
ST FFK
Sbjct: 702 STMTFFK 708
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 708 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 765
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 766 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 808
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M LYG Y +DL+K ++N L F Y+ L + YG N + G+WNG
Sbjct: 455 DPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDK-GEWNG 513
Query: 725 LIGEL 729
++ EL
Sbjct: 514 MVKEL 518
>gi|229577380|ref|NP_001153158.1| glutamate receptor, ionotropic, kainate 2 [Xenopus laevis]
gi|222875744|gb|ACM69014.1| ionotropic glutamate receptor subunit GluR6(Q) [Xenopus laevis]
Length = 908
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 300/577 (51%), Gaps = 41/577 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP+ E AF AV IN++ + L P+ L Q + YDS ++
Sbjct: 36 LRFGGIFESVESGPSGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASR 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACEQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T TI Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTIAYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS D ILKQA + +M +Y +YI + +
Sbjct: 204 LPIDTKDAKPLLKEMKRGKEFHVIFDCSHDMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W + + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNLTGFRILNIENSQVLSIIEKWSMDRLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGSRFISLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ GLN + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDLTSGLNMTENQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 466
EPY+M LYG Y +DL++ ++ L F Y+ L + Y
Sbjct: 438 ---------ILEEPYVMFKKSDKPLYGKARFEGYCIDLLEKLSRILGFEYEVRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + T +WNG++ EL + +ADLA+ L IT R +DFT PFMTLGISILYRKP
Sbjct: 489 GAKDDTTQQWNGMVRELMDHKADLAVAPLAITYVREQVIDFTKPFMTLGISILYRKPNGT 548
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 549 NPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVQDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S + Y++M + M S SV VK+N+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 695 KKSRIPTYEKMWAFMNSRSQSVLVKNNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGVLHMMK 795
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L F Y+ L + YG + T +WNG
Sbjct: 441 EPYVMFKKSDKPLYGKARFEGYCIDLLEKLSRILGFEYEVRLVEDGKYGAKDDTTQQWNG 500
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 501 MVRELMDH 508
>gi|56276|emb|CAA77776.1| kainate receptor [Rattus norvegicus]
Length = 920
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 304/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R +N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRKLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPCALGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEAYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|359062231|ref|XP_003585668.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Bos
taurus]
Length = 802
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVADGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPTSK 652
Q+GGL+DSKGYG+ P K
Sbjct: 768 TQIGGLIDSKGYGVGTPIGK 787
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|56274|emb|CAA77775.1| kainate receptor [Rattus norvegicus]
Length = 871
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 304/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDSRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D +PLLKE+K S E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 PANKDAKPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R +N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRKLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPCALGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEAYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|410904483|ref|XP_003965721.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Takifugu
rubripes]
Length = 918
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 306/580 (52%), Gaps = 47/580 (8%)
Query: 1 MKIVGIF----GP----NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLH 52
++I GIF GP + EE+A F+ AV IN++ + L P+ L +Q + YDS
Sbjct: 36 IRIGGIFEQTDGPVSLVSAEELA--FKFAVNNINRN-RTLLPNTTLTYDIQRINIYDSFE 92
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVN 112
++ C+ S G+ AIFGP + N ++S+C ++PHV+ W + + N
Sbjct: 93 ASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHVQVRW--KHHPMDNRDSFYAN 150
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV-- 170
+YP+ +S I ++ + W T T++Y+ L+ LQ+++ + P R ++
Sbjct: 151 LYPDYSSLSYAILDLVQFLKWKTATVVYDDSTGLIRLQELI---------MAPSRYNIRL 201
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
IRQLP DT D RPLLKE+K S E I+ DCS ILKQA+ + +M +Y +YI +
Sbjct: 202 KIRQLPLDTQDTRPLLKEMKRSREFRIIFDCSHQMAAQILKQAQTMGMMTEYYHYIFTT- 260
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV- 289
++ +D + ++ N+T R++N NP + SI+ W E + + E +
Sbjct: 261 ---LDLMAIDLEPYRFCGVNMTGFRILNVENPQVASIVEKWSMERQIPPKLDSGLLEGIM 317
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+AAL YDAV++ + + Q + L C W+ G + +K DG+TGR
Sbjct: 318 TTDAALTYDAVHIVSVSYQHAPQMTV--NSLQCHRHKPWRFGGRFMSFIKESHWDGLTGR 375
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
++ + TG R F L+ + D + +G W+ + GLN + ++ + + NR+L
Sbjct: 376 LSFNKTTGLRTDFDLDIISLKEDGLEKVGKWSASGGLNITEAPKRKGMNITDSLANRSLV 435
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
+++ EPY+M L G + +DL+K +A L FTY+ L +
Sbjct: 436 IST---------ILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELAGILGFTYEIRLVPD 486
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG+ + + G+WNG+I EL E RADLA+ LTIT R A+DFT PFM GISILYRKP
Sbjct: 487 GKYGSQD-EKGQWNGIIRELIEHRADLAVAPLTITYMREKAIDFTKPFMNTGISILYRKP 545
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ FSFL P++ D+WVY+ AYLGVS +LF +AR S
Sbjct: 546 NATKNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFS 585
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM+ P+ + +D+AK +I+YG V+ G
Sbjct: 629 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPVDSADDIAKQTKIEYGVVKDG 688
Query: 814 STRNFFK 820
+T FFK
Sbjct: 689 ATMTFFK 695
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 7/106 (6%)
Query: 573 KNSNVSLYQRMHSAMESSRPSV-FVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCD 631
K S VS +++M + M SSRPS VKS ++GV+RV++ YA MES+ I+Y +NC+
Sbjct: 695 KKSKVSTFEKMWAFM-SSRPSTSLVKSVEDGVQRVMQSN--YALLMESSTIDYITRRNCN 751
Query: 632 LMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
L +VGGL+DSKGYGI P S + K S A L ++ G +M+K
Sbjct: 752 LTKVGGLIDSKGYGIGTPLGSPYRDKIS--IAILSIMEDGRLHMLK 795
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L G + +DL+K +A L FTY+ L + YG+ + + G+WNG
Sbjct: 442 EPYVMLKKSDKALVGNDRFEGFCIDLLKELAGILGFTYEIRLVPDGKYGSQD-EKGQWNG 500
Query: 725 LIGELQEQ 732
+I EL E
Sbjct: 501 IIRELIEH 508
>gi|426217183|ref|XP_004002833.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 4 [Ovis
aries]
Length = 920
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVADGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|410910342|ref|XP_003968649.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Takifugu
rubripes]
Length = 855
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 307/594 (51%), Gaps = 62/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E + AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 12 LRIGGIFETLENEPISVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRK 70
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD-PNKYFIPTNGVHGVNVYP 115
C+ + G+ A+FGP + + ++S+C ++PH++ W P+ + +N+YP
Sbjct: 71 ACDQLALGVGAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS---VDNKDSFYINLYP 127
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
E IS+ + I+ W T T++YE L+ LQ++++ + +I+ IRQL
Sbjct: 128 EYTSISRAVLDIVQFYKWKTVTVVYEDATGLIRLQELIKAPSRYNIKIK-------IRQL 180
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P + D RPLLKE+K E +++ DCS + +LKQ + +M +Y ++ + ++
Sbjct: 181 PTGSKDARPLLKEMKKGKEFYVIFDCSYQTSADVLKQILSMGMMTEYYHFFFTT----LD 236
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE--- 292
+D + ++ N+T R++N NP + S++ W E + +AE+ IE
Sbjct: 237 LFALDLEPYRYSGVNMTGFRLLNIDNPQVASVVEKWAMERLQAPS----KAESGMIEGMM 292
Query: 293 ---AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
AALMYDAVY+ AAA Q + + L C W+ G N++K +G+TG+
Sbjct: 293 TTEAALMYDAVYMVAAASQRASQITV--SSLQCHRHKPWRFGSRFMNMLKDAQWNGLTGQ 350
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQ--------------WKVLGTWNTAFGLNHSRTVEQM 395
I ++ G R F L+ + D WK +G WN+ GLN + T +
Sbjct: 351 ITINKTDGLRKEFDLDVISLKEDSLEKTITGNNRLNKVWKKIGVWNSQTGLNLTDTNKDS 410
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ PY+M LYG Y +DL+K ++
Sbjct: 411 STNVTDSMANRTLIVTT---------ILENPYVMYKKSDKPLYGNDRFEGYCLDLLKELS 461
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F+Y+ L + YG N + G+WNG++ EL + ADLA+ LTIT R +DF+
Sbjct: 462 NILGFSYEVKLVSDGKYGAQNDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSK 520
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILY KP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 521 PFMTLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 574
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R Y NP + + E + + F + +++ + +A+STR+V G
Sbjct: 568 FVIARFTPYEWYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGG 627
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK +I+YG V GST FFK
Sbjct: 628 IWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDGSTMTFFK 684
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG++RV+ YA MEST IEY ++NC+L
Sbjct: 684 KKSKISTYEKMWAFMSSRKNTALVKNNREGIQRVLTTD--YALLMESTSIEYISQRNCNL 741
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 742 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 784
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M LYG Y +DL+K ++N L F+Y+ L + YG N + G+WNG+
Sbjct: 432 PYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFSYEVKLVSDGKYGAQNDK-GEWNGM 490
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 491 VRELIDHV 498
>gi|301777526|ref|XP_002924183.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 2
[Ailuropoda melanoleuca]
Length = 917
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 304/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|426217181|ref|XP_004002832.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3 [Ovis
aries]
Length = 918
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 305/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQKINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNRDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ +I+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVADGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|348525362|ref|XP_003450191.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like
[Oreochromis niloticus]
Length = 869
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 305/595 (51%), Gaps = 64/595 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E + AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 26 LRIGGIFETLENEPISVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 84
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+ A+FGP + + ++S+C ++PH++ W + +N+YPE
Sbjct: 85 ACDQLALGVGAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDSFYINLYPE 142
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI--RQ 174
IS+ + I+ W T T++YE L+ LQ++++ P R S+ I RQ
Sbjct: 143 YASISRAVLDIVQFYKWKTVTVVYEDATGLIRLQELIK---------APSRYSIKIKIRQ 193
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP + D RPLLKE+K E +++ DCS + +LKQ + +M +Y ++ + +
Sbjct: 194 LPTGSKDARPLLKEMKKGKEFYVIFDCSYQTSADVLKQILSMGMMTEYYHFFFTT----L 249
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------ 288
+ +D + ++ N+T R++N NPH+ S++ W E + +AET
Sbjct: 250 DLFALDLEPYRYSGVNMTGFRLLNIDNPHVASVVERWAMERLQAPS----KAETGMMEGM 305
Query: 289 VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTG 348
+ EAALMYDAVY+ AAA Q + + L C W+ G +++K +G+TG
Sbjct: 306 MTTEAALMYDAVYMVAAASQRTSQITV--SSLQCHRHKPWRFGSRFMSMLKDAQWNGLTG 363
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQ--------------WKVLGTWNTAFGLNHSRTVEQ 394
+I ++ G R F L+ + D WK +G WN+ GLN + +
Sbjct: 364 QIIINKTDGLRKEFDLDVISLKEDGLEKTNTGNNRLNKVWKKIGVWNSQTGLNLTEINKD 423
Query: 395 MDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMI 448
+ + NRTL VT+ PY+M LYG Y +DL+K +
Sbjct: 424 SSTNVTDSMANRTLIVTT---------ILENPYVMYKKSDKPLYGNDRFEGYCLDLLKEL 474
Query: 449 ANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFT 508
+N L F+Y+ L + YG N + G+WNG++ EL + ADLA+ LTIT R +DF+
Sbjct: 475 SNILGFSYEVKLVSDGKYGAQNDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFS 533
Query: 509 MPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILY KP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 534 KPFMTLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 588
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R Y NP + + E + + F + +++ + +A+STR+V G
Sbjct: 582 FVIARFTPYEWYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGG 641
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK +I+YG V GST FFK
Sbjct: 642 IWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDGSTMTFFK 698
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG++RV+ YA MEST IEY ++NC+L
Sbjct: 698 KKSKISTYEKMWAFMSSRKNTALVKNNREGIQRVLTTD--YALLMESTSIEYISQRNCNL 755
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 756 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 798
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M LYG Y +DL+K ++N L F+Y+ L + YG N + G+WNG+
Sbjct: 446 PYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFSYEVKLVSDGKYGAQNDK-GEWNGM 504
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 505 VRELIDHV 512
>gi|432907872|ref|XP_004077698.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Oryzias
latipes]
Length = 907
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 310/579 (53%), Gaps = 45/579 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP+ E AF+ A+ IN++ + L P+ L +Q + YDS ++
Sbjct: 35 LRFGGIFESIESGPSGAE-ELAFKFALNTINRN-RTLLPNTTLTYDIQRINIYDSFEASR 92
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V V++Y
Sbjct: 93 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKW---KHQVSDNRDVFYVSLY 149
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TI 172
P+ +S+ I +++ W T T++Y+ L+ LQ++++ P R ++ I
Sbjct: 150 PDFSSLSRAILDLVHFFKWKTVTVVYDDSTGLIRLQELIK---------APSRYNIRLKI 200
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
RQLPPD D +PLLKE+K E HI+ DC + ILKQA + +M +Y ++I +
Sbjct: 201 RQLPPDYKDAKPLLKEMKRGKEFHIIFDCGHEMAAGILKQALSMGMMTEYYHFIFTT--- 257
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVK 290
++ +D + ++ N+T R++N N + SI+ W E + + + +
Sbjct: 258 -LDLFALDVEPYRYSGVNMTGFRILNTENSQVASIIEKWSMERLQAPPKPDSGLLDGFMT 316
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
+AALMYDAV++ A A+Q ++ + L C W+ G L+K DG+TGRI
Sbjct: 317 TDAALMYDAVHVVAVAVQQ--SQQITVSSLQCNRHKPWRFGNRFMALIKEAHWDGLTGRI 374
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + G R F L+ + + + +G W+ + GLN + + + + NR+L V
Sbjct: 375 SFNKSNGLRTDFDLDVISLKEEGLEKIGIWDPSSGLNMTDNQKGKTINVSDSLSNRSLIV 434
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
++ EPY+M LYG Y +DL++ +A+ L FTY+ L +
Sbjct: 435 ST---------ILEEPYVMFRKSDTPLYGNDRFEGYCIDLLRELASILGFTYEVRLVEDG 485
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG + +G+WNG++ EL + RADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 486 KYGVQDENSGQWNGMVRELMDHRADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPN 545
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 546 GTNPGVFSFLSPLSPDIWMYILLAYLGVSCVLFVIARFS 584
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +++YG VE G
Sbjct: 628 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKVEYGVVEDG 687
Query: 814 STRNFFK 820
ST +FFK
Sbjct: 688 STMSFFK 694
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS + + K + +S Y +M M S R SV V S ++G+ RV+ YAF EST
Sbjct: 684 VEDGSTMSF-FKKTKISTYDKMWEFMSSRRHSVMVGSVEDGIHRVLTSD--YAFLTESTT 740
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
IE+ ++NC+L Q+GGL+DSK YG+ P S + K + +L+ +G+ +MMK
Sbjct: 741 IEFVTQRNCNLTQIGGLIDSKAYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 794
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ +A+ L FTY+ L + YG + +G+WNG
Sbjct: 440 EPYVMFRKSDTPLYGNDRFEGYCIDLLRELASILGFTYEVRLVEDGKYGVQDENSGQWNG 499
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 500 MVRELMDH 507
>gi|410904635|ref|XP_003965797.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Takifugu
rubripes]
Length = 896
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 308/575 (53%), Gaps = 45/575 (7%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP+ E AF+ A+ IN++ + L P+ L +Q + YDS ++ C+
Sbjct: 28 GIFESIESGPSGAE-ELAFKFALNTINRN-RTLLPNTTLTYDIQRINIYDSFEASRKACD 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N + VN+YP+
Sbjct: 86 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKW---KHQVADNRDIFYVNLYPDFS 142
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLP 176
+S+ I +++ W T T++Y+ L+ LQ++++ P R ++ IRQLP
Sbjct: 143 SLSRAILDLVHFFKWKTVTVVYDDSTGLIRLQELIK---------APSRYNIRLKIRQLP 193
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
++ D +PLLKE+K E HI+ DCS + ILKQA + +M +Y +YI + ++
Sbjct: 194 LESKDAKPLLKEMKRGKEFHIIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDL 249
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAA 294
+D + ++ N+T R++N N + SI+ W E + + + + +AA
Sbjct: 250 FALDVEPYRYSGVNMTGFRILNTENSQVASIIEKWSMERLQAPPKPDSGLLDGFMTTDAA 309
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAV++ A A+Q ++ + L C W+ G L+K DG+TGRI +
Sbjct: 310 LMYDAVHVVAVAVQQ--SQQITVSSLQCNRHKPWRFGNRFMALIKEAHWDGLTGRITFNR 367
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + + + +GTW+ GLN + + + + NR+L +++
Sbjct: 368 TNGLRTDFDLDVISLREEGLEKIGTWDPLSGLNMTDNQKGKTTNVSDSLSNRSLIIST-- 425
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
EPY+M LYG Y +DL+K +A+ L FTY+ L + YG
Sbjct: 426 -------ILEEPYVMFKKSDKPLYGNERFEGYCMDLLKELASILGFTYEVHLVEDGKYGY 478
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+ TG+WNG++ EL + RADLA+ L IT R +DF+ PFMTLGISILYRKP P
Sbjct: 479 QDETTGQWNGMVKELMDHRADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNP 538
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 539 GVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 573
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP + + E + F + +++ + +A+STR+V G
Sbjct: 567 FVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 626
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE GST FFK
Sbjct: 627 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGVVEDGSTMTFFK 683
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS + + K + +S Y +M M S R +V VK+ +EG++RV+ YAF MEST
Sbjct: 673 VEDGSTMTF-FKKTKISTYDKMWEFMSSRRHTVMVKNVEEGIQRVLT--SDYAFLMESTT 729
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
IE+ ++NC+L Q+GGL+DSK YG+ P S + K + +L+ +G+ +MMK
Sbjct: 730 IEFVTQRNCNLTQIGGLIDSKAYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 783
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K +A+ L FTY+ L + YG + TG+WNG
Sbjct: 429 EPYVMFKKSDKPLYGNERFEGYCMDLLKELASILGFTYEVHLVEDGKYGYQDETTGQWNG 488
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 489 MVKELMDH 496
>gi|348526169|ref|XP_003450593.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Oreochromis niloticus]
Length = 1128
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 294/556 (52%), Gaps = 37/556 (6%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ AV IN++ + L P+ L +Q + YDS ++ C+ S G+ AIFGP +
Sbjct: 268 AFKFAVNNINRN-RTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSS 326
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTF 136
N ++S+C ++PH++ W + + N+YP+ +S I ++ + W T
Sbjct: 327 SNAVQSICNALEVPHIQVRW--KHHPMDNRDTFYANLYPDYSSLSYAILDLVQFLKWKTA 384
Query: 137 TIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLPPDTDDYRPLLKEIKNSSE 194
T++Y+ L+ LQ+++ + P R ++ IRQLP DT D RPLLKE+K S E
Sbjct: 385 TVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQLPLDTQDTRPLLKEMKRSRE 435
Query: 195 SHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTV 254
I+ DCS ILKQA+ + +M +Y +YI + ++ +D + ++ N+T
Sbjct: 436 FRIIFDCSHHMAAQILKQAQTMGMMTEYYHYIFTT----LDLMAIDLEPYRFCGVNMTGF 491
Query: 255 RMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV-KIEAALMYDAVYLFAAALQSLGER 313
R++N NP + SI W E + + E + +AAL YDAV++ + + Q +
Sbjct: 492 RILNVDNPQVASIAEKWSMERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQM 551
Query: 314 KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
L C W+ G + +K DG+TGR++ + TG R F L+ + D
Sbjct: 552 TV--NSLQCHRHKPWRFGGRFMSFIKESHWDGLTGRLSFNKTTGLRTDFDLDIISLKEDG 609
Query: 374 WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+ +G W+ + GLN + ++ + + NR+L +T+ EPY+M
Sbjct: 610 LEKVGKWSASGGLNITEVPKRKGMNITDSLANRSLVITT---------ILEEPYVMLKKS 660
Query: 434 TGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
L G + +DL+K +AN L FTY+ L + YG+ + + G+WNG+I EL E R
Sbjct: 661 DKALVGNDRFEGFCIDLLKELANILGFTYEIRLVPDGKYGSQDDK-GQWNGMIRELIEHR 719
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
ADLA+ LTIT R +DF+ PFM++GISILYRKP FSFL P++ D+WVY+
Sbjct: 720 ADLAVAPLTITYVREKFIDFSKPFMSMGISILYRKPNTTNNGFFSFLNPMTPDIWVYILL 779
Query: 548 AYLGVSLLLFFLARIS 563
AYLGVS +LF +AR S
Sbjct: 780 AYLGVSCVLFVIARFS 795
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM+ P+ + +D+AK +I+YG V+ G
Sbjct: 839 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPVDSADDIAKQTKIEYGVVKDG 898
Query: 814 STRNFFK 820
+T +FFK
Sbjct: 899 ATMSFFK 905
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S VS +++M + M S + VKS ++G++RV+K YA EST I+Y +NC+L
Sbjct: 905 KKSRVSTFEKMWAFMSSRPRTSLVKSIEDGIQRVLK--SDYALITESTTIDYITRRNCNL 962
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGGL+DSKGYGI P S + K S A L +L G +M+K
Sbjct: 963 TQVGGLIDSKGYGIGTPLGSPYRDKIS--IAILSILEDGRLHMLK 1005
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L G + +DL+K +AN L FTY+ L + YG+ + + G+WNG
Sbjct: 652 EPYVMLKKSDKALVGNDRFEGFCIDLLKELANILGFTYEIRLVPDGKYGSQDDK-GQWNG 710
Query: 725 LIGELQEQ 732
+I EL E
Sbjct: 711 MIRELIEH 718
>gi|345795237|ref|XP_544843.3| PREDICTED: glutamate receptor, ionotropic kainate 1 [Canis lupus
familiaris]
Length = 918
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 304/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTLVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|327284441|ref|XP_003226946.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Anolis
carolinensis]
Length = 897
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 305/572 (53%), Gaps = 37/572 (6%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 18 GIFEYADGPNAQVMNAEEQAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 76
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 77 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 134
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 135 ASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 185
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P DTDD RPLLKE+K E I+ DC+ V ILKQA + +M +Y ++I + ++
Sbjct: 186 PLDTDDMRPLLKEMKRGREFRIIFDCTHTMAVHILKQAMAMGMMTEYYHFIFTT----LD 241
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSL--NVRAETVKIEA 293
+ +D + ++ N+T R++N NPH+ +I++ W E + + + + +A
Sbjct: 242 LYALDLEQYRYSGVNLTGFRILNVENPHVSNIIDKWSMERLQTAPKPEPGLISGIMMTDA 301
Query: 294 ALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
AL+YDAV++ + Q R P T L C +W+ G N +K +G+TGRI
Sbjct: 302 ALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIV 357
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ +G R F L+ + + + +G W+ + GLN + + + + NR+L VT
Sbjct: 358 FNKTSGLRTDFDLDIISLKEEGLEKVGVWSPSEGLNITEVSRRQGPNVTDSLTNRSLIVT 417
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
+ + V+F ++ + E GY VDL+ +A L F+Y+ L + YG +
Sbjct: 418 T-VLEEPFVMFTRSDTVLSGNKRFE--GYCVDLLAEVARILGFSYEIRLVDDGKYGAQD- 473
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+ G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLGISILYRK P +F
Sbjct: 474 EKGQWNGMIRELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGISILYRKANGTSPSVF 533
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 534 SFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 565
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 609 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 668
Query: 814 STRNFFK 820
+T FFK
Sbjct: 669 ATMTFFK 675
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+ S VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 675 KKSKISTFEKMWAFM-SSKSSSLVKNNEEGIQRTLTSD--YALLMESTTIEYITQRNCNL 731
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+D+KGYGI P S + K + +L+
Sbjct: 732 TQIGGLIDTKGYGIGTPMGSPYRDKITIAILQLQ 765
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL+ +A L F+Y+ L + YG + + G+WNG+I EL
Sbjct: 442 GYCVDLLAEVARILGFSYEIRLVDDGKYGAQD-EKGQWNGMIREL 485
>gi|326671257|ref|XP_001924038.3| PREDICTED: glutamate receptor, ionotropic kainate 1 [Danio rerio]
Length = 904
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 305/580 (52%), Gaps = 50/580 (8%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E + AF+ AV IN++ + L P+ L +Q V +DS ++
Sbjct: 39 IRIGGIFETRENEPVSMDELAFKFAVTSINRN-RTLMPNTTLTYDIQRVNLFDSFEASRR 97
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD-PNKYFIPTNGVHGVNVYP 115
+C+ + G+AA+FGP + + ++S+C ++PH++ W P+ + +N+YP
Sbjct: 98 VCDQLALGVAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS---VDNKDNFYINLYP 154
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
E IS+ I I+ W T++YE L+ +Q++++ ++ +IR IRQL
Sbjct: 155 EYTSISRAILDIVIFYKWKCVTVVYEDSTGLMRMQELIKAPSKNNLKIR-------IRQL 207
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D RPLLKE+K E +++ DCS +LKQ + +M +Y ++ + ++
Sbjct: 208 PSGGGDSRPLLKEMKKEKEFYVIFDCSYQVAAELLKQLMSMGMMTEYYHFFFTT----LD 263
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEEN------ERGRSLNVRAETV 289
+D + ++ N+T R++N + ++ S++ W E E G + + +
Sbjct: 264 LFALDLEPYRYSGVNMTAFRLLNLDDSYVASVIQKWSMERQLAPPKPESG----LMSGIM 319
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
AALMYDAV++ A A Q + + L C W++G NL K DG+TGR
Sbjct: 320 TTAAALMYDAVFMVAVASQRATQMTV--SSLQCHRHKPWRYGPRFMNLFKEAQWDGLTGR 377
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I L+ G R F+L+ + D +G WN+ GLN + + +K + + NRTL
Sbjct: 378 IVLNKTDGLRKEFNLDLISLKEDGTAKIGVWNSYTGLNLTEIKD--NKNITDSLANRTLI 435
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
VT+ PY+M LYG Y +DL+K ++N L FTY+ L +
Sbjct: 436 VTT---------ILENPYVMYKKSDKVLYGNDRFEGYCLDLLKELSNILGFTYEVKLVTD 486
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG N + G+WNG++ EL + ADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 487 GKYGAQNDK-GEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKP 545
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PL+ D+W+Y+ A LGVS +LF +AR +
Sbjct: 546 NGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R Y NP + + E + + F + +++ + +A+STR++ G
Sbjct: 579 FVIARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGG 638
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK RI+YG V GST FFK
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFK 695
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++K+G+ RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRKNTALVKNSKDGITRVLTTD--YALLMESTSIEYITQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 795
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M LYG Y +DL+K ++N L FTY+ L + YG N + G+WNG+
Sbjct: 443 PYVMYKKSDKVLYGNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDK-GEWNGM 501
Query: 726 IGELQEQV 733
+ EL + +
Sbjct: 502 VRELIDHI 509
>gi|354466202|ref|XP_003495563.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 4
[Cricetulus griseus]
Length = 949
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 302/594 (50%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+I L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNITLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWRTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWHLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQ---------------WKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + + W+ +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKPLYKVWQKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M L+G Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLHGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG + + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVRLVPDGKYGAQDDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S S VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSREQSALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G Y +DL+K ++N L F Y L + YG + + G+WNG
Sbjct: 457 EPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|354466204|ref|XP_003495564.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 5
[Cricetulus griseus]
Length = 920
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 302/594 (50%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+I L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNITLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWRTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWHLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQ---------------WKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + + W+ +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKPLYKVWQKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M L+G Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLHGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG + + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVRLVPDGKYGAQDDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS + + K S +S Y++M + M S S VK+N EG++RV+ YA MEST
Sbjct: 700 VKDGSTMTF-FKKSKISTYEKMWAFMSSREQSALVKNNDEGIQRVLTTD--YALLMESTS 756
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
IEY ++NC+L Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 757 IEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G Y +DL+K ++N L F Y L + YG + + G+WNG
Sbjct: 457 EPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|301619637|ref|XP_002939193.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Xenopus
(Silurana) tropicalis]
Length = 926
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/596 (32%), Positives = 307/596 (51%), Gaps = 65/596 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 45 LRIGGIFETVENEPINVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 103
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW------DPNKYFIPTNGVHG 110
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +FI
Sbjct: 104 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDSFFI------- 156
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
N++P+ IS+ + ++ W T T++YE L+ LQ++++ + +I+
Sbjct: 157 -NLHPDYAAISRAVLELVLHYSWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK------ 209
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
IRQLP D R LLKE+K S E +++ DCS + ILKQ + +M +Y +Y +
Sbjct: 210 -IRQLPSGNKDARTLLKEMKKSREFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTT- 267
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAET 288
++ +D + ++ N+T R++N NP + S++ W E + +
Sbjct: 268 ---MDLFALDLEPYRYSGVNMTGFRLLNIDNPQVSSVVEKWSMERLQAPPKPETGLLDGM 324
Query: 289 VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTG 348
+ +AALMYDAVY+ A A Q + + L C W+ G +L+K DG+TG
Sbjct: 325 MTTDAALMYDAVYMVAVATQRATQMTV--SSLQCHRHKPWRFGPRFMSLIKEARWDGLTG 382
Query: 349 RINLDSQTGRRNSFSL---------------EFVEYVSDQWKVLGTWNTAFGLNHSRTVE 393
RI + G R F + E V +++ WK +G WN+ GLN + ++
Sbjct: 383 RITFNRTDGLRRDFDMDIISLKEDGMEKAAGETVNHLNKVWKKVGVWNSNTGLNMTDNLK 442
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKM 447
+ + NRTL VT+ +PY+M LYG Y +DL+K
Sbjct: 443 DKSTNITDSLANRTLIVTT---------ILEDPYVMFRKSDKPLYGNDRFEGYCLDLLKE 493
Query: 448 IANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDF 507
++N L FTY+ L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF
Sbjct: 494 LSNILGFTYEVRLVVDGKYGAQNDK-GEWNGMVRELIDHKADLAVAPLTITYVREKVIDF 552
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 553 SKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 608
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 652 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 711
Query: 814 STRNFFK 820
ST FFK
Sbjct: 712 STMTFFK 718
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 718 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 775
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 776 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 818
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M LYG Y +DL+K ++N L FTY+ L + YG N + G+WNG
Sbjct: 465 DPYVMFRKSDKPLYGNDRFEGYCLDLLKELSNILGFTYEVRLVVDGKYGAQNDK-GEWNG 523
Query: 725 LIGEL 729
++ EL
Sbjct: 524 MVREL 528
>gi|410970116|ref|XP_003991535.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 1 [Felis catus]
Length = 918
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 303/594 (51%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NP + SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPRVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + +++ WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P L + A L +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGNKL-RDKITIAILNYKREGKLHMMK 810
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|354466200|ref|XP_003495562.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 3
[Cricetulus griseus]
Length = 918
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 302/594 (50%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+I L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNITLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWRTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKPWHLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQ---------------WKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + + W+ +G WN+ GLN +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKPLYKVWQKIGIWNSNSGLNMTDGNRDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M L+G Y +DL+K ++
Sbjct: 437 SNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLHGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG + + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFLYDVRLVPDGKYGAQDDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS + + K S +S Y++M + M S S VK+N EG++RV+ YA MEST
Sbjct: 700 VKDGSTMTF-FKKSKISTYEKMWAFMSSREQSALVKNNDEGIQRVLTTD--YALLMESTS 756
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
IEY ++NC+L Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 757 IEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G Y +DL+K ++N L F Y L + YG + + G+WNG
Sbjct: 457 EPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|432910378|ref|XP_004078337.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Oryzias
latipes]
Length = 918
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 306/580 (52%), Gaps = 47/580 (8%)
Query: 1 MKIVGIF----GP----NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLH 52
++I GIF GP + EE+A F+ AV IN++ + L P+ L +Q + YDS
Sbjct: 36 IRIGGIFEQTDGPVSLVSAEELA--FKFAVNNINRN-RTLLPNTTLTYDIQRINIYDSFE 92
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVN 112
++ C+ S G+ AIFGP + N ++S+C ++PH++ W + + N
Sbjct: 93 ASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRW--KHHPMDNRDSFYAN 150
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV-- 170
+YP+ +S I ++ + W T T++Y+ L+ LQ+++ + P R ++
Sbjct: 151 LYPDYSSLSYAILDLVQYLKWKTATVVYDDSTGLIRLQELI---------MAPSRYNIRL 201
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
IRQLP DT+D RPLLKE+K E I+ DCS ILKQA+ + +M +Y +YI +
Sbjct: 202 KIRQLPLDTEDTRPLLKEMKRGREFRIIFDCSHHMAAQILKQAQTMGMMTEYYHYIFTT- 260
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV- 289
++ ++ + ++ N+T R++N NP + SI+ W E + + E +
Sbjct: 261 ---LDLMAINLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSMERQIPPKPDSGLLEGIM 317
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+AAL YDAV++ + + Q + L C W+ G + +K DG+TGR
Sbjct: 318 TTDAALTYDAVHIVSVSYQHAPQMTV--NSLQCHRHKPWRFGGRFMSYIKESHWDGLTGR 375
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
++ + TG R F L+ V D + +G W+ + GLN + ++ + + NR+L
Sbjct: 376 LSFNKTTGLRTDFDLDIVSLKEDGLEKVGKWSASGGLNITEVPKRKGINITDSLANRSLV 435
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
+T+ EPY+M L G + +DL+K +A L FTY+ L +
Sbjct: 436 ITT---------ILEEPYVMLKKSDRALVGNDRFEGFCIDLLKELAGLLGFTYEIRLVPD 486
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG+ + + G+WNG+I EL E RADLA+ LTIT R +DF+ PFM++GISILYRKP
Sbjct: 487 GKYGSQDDK-GQWNGMIRELIEHRADLAVAPLTITYTREKFIDFSKPFMSMGISILYRKP 545
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL P++ D+WVY+ AYLGVS +LF +AR S
Sbjct: 546 NSTNSGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFS 585
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM+ P+ + +D+AK +I+YG ++ G
Sbjct: 629 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMDTPVDSADDIAKQTKIEYGVIKDG 688
Query: 814 STRNFFK 820
+T +FFK
Sbjct: 689 ATMSFFK 695
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S VS +++M + M S + VKS ++G++RV+K YA EST I+Y +NC+L
Sbjct: 695 KKSRVSTFEKMWAFMSSRPRTSLVKSIEDGIQRVLKSD--YALITESTTIDYITRRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGG++DSKGYGI P S + K + A L +L G +M+K
Sbjct: 753 TQVGGIIDSKGYGIGTPIGSPYRDKIT--IAILSILEDGRLHMLK 795
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L G + +DL+K +A L FTY+ L + YG+ + + G+WNG
Sbjct: 442 EPYVMLKKSDRALVGNDRFEGFCIDLLKELAGLLGFTYEIRLVPDGKYGSQDDK-GQWNG 500
Query: 725 LIGELQEQ 732
+I EL E
Sbjct: 501 MIRELIEH 508
>gi|344277142|ref|XP_003410363.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Loxodonta africana]
Length = 905
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/579 (32%), Positives = 299/579 (51%), Gaps = 46/579 (7%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N++P+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLHPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++ NP + SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLKIDNPEVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLAV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +G WN+ GLN + + + + NRTL V
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNISDSLANRTLIV 436
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY+M LYG Y +DL+K ++N L F Y L +
Sbjct: 437 TT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDG 487
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP
Sbjct: 488 KYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPN 546
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 GTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 629 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 688
Query: 814 STRNFFK 820
ST FFK
Sbjct: 689 STMTFFK 695
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + +V VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 695 KKSKISTYEKMWAFMSSRQQTVLVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 752
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 753 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 795
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 442 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVKEL 505
>gi|321460500|gb|EFX71542.1| hypothetical protein DAPPUDRAFT_327119 [Daphnia pulex]
Length = 897
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 309/575 (53%), Gaps = 42/575 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF A+ RIN++ + LP ++ + + + DS ++ +C
Sbjct: 30 IRIGGLFDSSDPMPESAFRQALDRINENGRFLPKSNLVS-LSERLPPNDSHFASRRVCQM 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+AA+ GP S + I+S+C +IPHV T+ + +N++P +
Sbjct: 89 LRNGLAAVLGPSSSSTSSHIQSICDALEIPHVST--GCQSRLRRTH--YAINLHPHPTAL 144
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I +W FTI+YE + +V LQ +L+ + +I +R+LP TD
Sbjct: 145 GQAYVDVIRTWEWTAFTILYEEEEAMVRLQHLLKVSTTSGYKI-------NVRKLP-QTD 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM-GDYQNYILSLTSYWINAHTV 239
+YRPLLKEI E I+LDCS + +LKQA++V L+ Y +I SL + HT+
Sbjct: 197 NYRPLLKEIDGKGERQIVLDCSAETLAVVLKQAQQVGLITSSYSFFITSL-----DLHTL 251
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER---GRSLNVRAETVKIEAALM 296
D +D++ NIT +R+++ ++ Y R +N A T E AL
Sbjct: 252 DLEDYKYSGTNITGLRLVDLNKIKAANLTKA--YSSTSRYYNPAVMNPNATTFTTETALT 309
Query: 297 YDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
YDAV++ A AL L + + PL+C+ +W HG + N M + ++G+TG I D+Q
Sbjct: 310 YDAVHMIAKALGELDRSQDVRVKPLNCDGTDTWIHGNSLINYMTLVEMEGLTGFIKFDTQ 369
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR-TVEQMDKEKKEKIENRTLTVTSKT 414
G R F L +E + + +WN G N +R T + + N+TL V+SK
Sbjct: 370 -GYRTFFHLSILELTPEGLTSVSSWNPIDGANITRPTATDATPLLADSLVNKTLIVSSKL 428
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY M + L G + VD+I ++ F Y + ++ YG+
Sbjct: 429 ---------SDPYFMLKESSKMLAGNDRFEGFVVDVIDEVSKLSGFKYTLQIVADSNYGS 479
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
LNP+TG+WNG+I ELQ+++ADL I DL+IT +R AVDF++PFM GISILY+KP K+ P
Sbjct: 480 LNPETGEWNGVIRELQDEKADLGIADLSITYDREQAVDFSLPFMNTGISILYKKPQKQPP 539
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSFL P S +VW+YM AY+G+SL LF LAR++
Sbjct: 540 SLFSFLSPFSVEVWIYMCAAYVGISLSLFILARLT 574
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I S++ +A STR+VAG+WWFFT+I+ISSYTANLAAFLT R+ PI +V+D
Sbjct: 603 FTIGSLMQQGCDLAPKATSTRMVAGIWWFFTMIIISSYTANLAAFLTIERVESPISSVDD 662
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK +IKYG V GST FF+
Sbjct: 663 LAKQTKIKYGLVGSGSTGAFFR 684
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 64/101 (63%), Gaps = 8/101 (7%)
Query: 573 KNSNVSLYQRMHSAMES-------SRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYE 625
+++ ++ YQRM ME+ S P F KSN EGV+RV KG YAF MES+ IE+
Sbjct: 684 RDAKIANYQRMWQFMEAINRSSTPSNPGPFTKSNMEGVKRVQDSKGLYAFLMESSTIEFF 743
Query: 626 VEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
E+ CDL QVGG++DSKGYGIAM T S + A S KL+
Sbjct: 744 TERICDLTQVGGMIDSKGYGIAMKTGSPYRAAISQAILKLQ 784
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY M + L G + VD+I ++ F Y + ++ YG+LNP+TG+WNG
Sbjct: 430 DPYFMLKESSKMLAGNDRFEGFVVDVIDEVSKLSGFKYTLQIVADSNYGSLNPETGEWNG 489
Query: 725 LIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
+I ELQ++ D I + + F F+N +S
Sbjct: 490 VIRELQDEKADLGIADLSITYDREQAVDFSLPFMNTGIS 528
>gi|326674615|ref|XP_002664816.2| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Danio
rerio]
Length = 893
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 295/574 (51%), Gaps = 43/574 (7%)
Query: 5 GIFGPNEEEVAT------AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
GIF + VA AF+ AV IN++ + L P+ L +Q + YDS ++ C
Sbjct: 13 GIFEQTDGPVALVSSEELAFKFAVNNINRN-RTLLPNTTLTYDIQRINIYDSFEASRKAC 71
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ S G+ AIFGP + N ++S+C ++PH++ W + + N+YP+
Sbjct: 72 DQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRW--KHHPMDNRDTFYANLYPDYS 129
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLP 176
+S I ++ + W T T++Y+ L+ LQ+++ + P R ++ IRQLP
Sbjct: 130 SLSYAILDLVQFLKWKTATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQLP 180
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
DT D RPLLKE+K S E I+ DCS ILKQA+ + +M +Y +YI + ++
Sbjct: 181 MDTVDTRPLLKEMKRSREFRIIFDCSHTMAAQILKQAQMMGMMTEYYHYIFTT----LDL 236
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV-KIEAAL 295
++ + ++ N+T R++N NP + SI+ W E + + E + +AAL
Sbjct: 237 MAINLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSLERQIPPKPDSGLLEGIMTTDAAL 296
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
YDAV++ + + Q + L C W+ G + +K DG+TGR+ +
Sbjct: 297 TYDAVHIVSVSYQHAPQMTV--NSLQCHRHKPWRFGGRFMSFIKESHWDGLTGRLCFNRT 354
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
TG R F L+ V D + +G W+ + GLN + Q + + NR+L +T+
Sbjct: 355 TGLRTDFDLDIVSLKEDGLQKVGKWSASGGLNITEVPRQNGMNITDSLSNRSLVITT--- 411
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
EPY+M L G + +DL+K +A+ L F+Y+ L + YG
Sbjct: 412 ------ILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFSYEIHLVPDGKYG-F 464
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
G+WNG+I EL E RADLA+ LTIT R A+DF+ PF+ GISILYRKP
Sbjct: 465 QDDKGQWNGMIRELMEHRADLAVAPLTITFMREKAIDFSKPFLNTGISILYRKPNSTNSG 524
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL P++ D+WVY+ AYLGVS +LF +AR S
Sbjct: 525 FFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFS 558
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM+ P+ + +DLAK +I+YG V+ G
Sbjct: 602 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPVDSADDLAKQTKIEYGVVKDG 661
Query: 814 STRNFFK 820
+T +FFK
Sbjct: 662 ATMSFFK 668
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S VS +++M + M S + + FVKS ++G++RV+K YA MEST IEY +NC+L
Sbjct: 668 KKSRVSTFEKMWAFMSSRQSTSFVKSIEDGIQRVLKSD--YALLMESTTIEYVTRRNCNL 725
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGG++DSKGYGI P S + K + A L +L G +M+K
Sbjct: 726 TQVGGIIDSKGYGIGTPKGSPYRDKIT--IAILGILEDGRLHMLK 768
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L G + +DL+K +A+ L F+Y+ L + YG G+WNG
Sbjct: 415 EPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFSYEIHLVPDGKYG-FQDDKGQWNG 473
Query: 725 LIGELQEQ 732
+I EL E
Sbjct: 474 MIRELMEH 481
>gi|326674427|ref|XP_690040.4| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Danio
rerio]
Length = 879
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 305/591 (51%), Gaps = 57/591 (9%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E + AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETLENEPISVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD-PNKYFIPTNGVHGVNVYP 115
C+ + G+AA+FGP + + ++S+C ++PH++ W P+ + +N+YP
Sbjct: 96 ACDQLALGVAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS---VDNKDSFYINLYP 152
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI--R 173
+ IS+ + I+ W T++YE L+ LQ++++ P R S+ I R
Sbjct: 153 DYASISRAVLDIVQFYKWKAVTVVYEDATGLIRLQELIK---------APSRYSIKIKIR 203
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
QLP + D RPLLKE+K E ++ DCS +LKQ + +M +Y ++ +
Sbjct: 204 QLPTGSKDARPLLKEMKKGKEFCVIFDCSYQTAADVLKQLLSMGMMTEYYHFFFTT---- 259
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKI 291
++ +++D + F+ N+T R++N NP + S++ W E + ++ +
Sbjct: 260 LDLYSLDLEPFRYSGVNMTGFRLLNIDNPQVASVVEKWSMERLQAPPKPETGLQDGMMTT 319
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
EAALMYDAVY+ AAA Q + + L C W+ G ++ K +G+TG+I
Sbjct: 320 EAALMYDAVYMVAAASQRASQITV--SSLQCHRHKPWRFGSRFISMFKEAQWNGLTGQII 377
Query: 352 LDSQTGRRNSFSLEFVEYVSDQ-------------WKVLGTWNTAFGLNHSRTVEQMDKE 398
++ G R F L+ + D WK +G WN+ GLN + + + +
Sbjct: 378 INKTDGLRKDFDLDIISLKEDGLEKPLESGRFNKVWKKIGVWNSNTGLNLTDSNKDKNTN 437
Query: 399 KKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANEL 452
+ + NRTL VT+ PY+M LYG Y +DL+K ++N L
Sbjct: 438 VTDSMANRTLIVTT---------ILENPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNIL 488
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
F+Y+ L + YG N + G+WNG++ EL + ADLA+ LTIT R +DF+ PFM
Sbjct: 489 GFSYEVKLVTDGKYGAQNDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFM 547
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
TLGISILY KP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 548 TLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 598
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R Y NP + + E + + F + +++ + +A+STR+V G
Sbjct: 592 FVIARFTPYEWYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGG 651
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK +I+YG V GST FFK
Sbjct: 652 IWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDGSTMTFFK 708
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG++RV+ YA MEST IEY ++NC+L
Sbjct: 708 KKSKISTYEKMWAFMSSRKNTALVKNNREGIQRVLTTD--YALLMESTSIEYISQRNCNL 765
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 766 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 808
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M LYG Y +DL+K ++N L F+Y+ L + YG N + G+WNG+
Sbjct: 456 PYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFSYEVKLVTDGKYGAQNDK-GEWNGM 514
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 515 VRELIDHV 522
>gi|332018741|gb|EGI59306.1| Glutamate receptor, ionotropic kainate 2 [Acromyrmex echinatior]
Length = 933
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 318/589 (53%), Gaps = 74/589 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCN 59
+KI IF +E + + F A+ + ++ L P L PI++ ++ N DS T + C
Sbjct: 37 IKIGAIFHKGDENLNSTFTKAI--FDTKYENLAPAFELIPIIKFIDANTDSFKTGAIACE 94
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-------GVHGVN 112
EG+AAIFGP S R+I+ S+ FD+PH+E W N+ I N +N
Sbjct: 95 LLEEGVAAIFGPPSRHTRSIVASIAARFDVPHIEYVWRENEELIEKNKRKKILSSKMTIN 154
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI 172
V+P S +S+ I+ +I M+W F IYE + L LQ+ L + + I T+
Sbjct: 155 VFPTSEKVSQAIADVIASMEWRNFAAIYENDEGLSRLQKTLTLKGNKENPIVH-----TV 209
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
RQL + DYR +LKEI++ S +I++D + + +L QAKEV L+ DY N++L+
Sbjct: 210 RQLN-EGSDYRTILKEIRSLSVCNIIIDVKPENIMKVLNQAKEVRLLADYCNFVLT---- 264
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
++++ + + + G NIT + + N I I W+ +
Sbjct: 265 YMDSSKLSILEMRNGTVNITGLSI--RENDDIEEI--DWL-------------------D 301
Query: 293 AALMYDAVYLFAAALQSLGERKP-----LPTPLSCENPSS-WQHGLGIGNLMKSITIDG- 345
+A++YDAV+L AL++L R P L C N ++ +Q G I ++M+ ++ G
Sbjct: 302 SAVLYDAVFLLQKALETLNARNDNEEDIDPISLFCTNSTTKYQVGPNIISIMRELSKMGK 361
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG +N+D + GRR F+++ + + +G W G+N RT ++ D + IE
Sbjct: 362 ITGVMNID-EYGRRQDFNVKILNFRPSGIVQMGFWEPLTGVNVIRTEKEQDSYLYKSIEE 420
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMK--NPETGELY------GYSVDLIKMIANELNF--- 454
+ ++ + + EPY+MK N GE+ GY +DLI IA+ L+F
Sbjct: 421 KIFKIS---------VMESEPYIMKVTNGTHGEMINQIRYEGYCIDLINAIADFLHFKGI 471
Query: 455 TYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTL 514
++ V ++ Y +P T W+GLI + ++ ADLAICDLTIT ER++AVDF+ PFM L
Sbjct: 472 VFEIVTTKQGKY---DPVTKTWDGLIRRIVDREADLAICDLTITHERKSAVDFSHPFMNL 528
Query: 515 GISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
GISI++ KP +K PD FSFL PLS +VW YMATA+LGVS+++F AR++
Sbjct: 529 GISIIFSKPEEKTPDFFSFLLPLSTEVWFYMATAFLGVSIIIFLQARMA 577
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 68/77 (88%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
KNSN S Y+RM +AM +RPSVF SN++G+ERVVK KG+YA+FMES+ I+Y++E+NC++
Sbjct: 687 KNSNYSTYKRMWAAMTDARPSVFTSSNRDGIERVVKAKGQYAYFMESSSIDYQLERNCEI 746
Query: 633 MQVGGLLDSKGYGIAMP 649
+++GGL+D+KGYGIAMP
Sbjct: 747 IKIGGLIDNKGYGIAMP 763
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A S R++A MWWFFTLIMISSYTANLAAFLT +M PIK VEDLAK +I+YG + G
Sbjct: 621 KAPSLRMLASMWWFFTLIMISSYTANLAAFLTVDKMETPIKGVEDLAKQTKIQYGAQQGG 680
Query: 814 STRNFFK 820
ST FFK
Sbjct: 681 STSTFFK 687
>gi|344277144|ref|XP_003410364.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Loxodonta africana]
Length = 918
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 302/594 (50%), Gaps = 61/594 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N++P+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLHPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++ NP + SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLKIDNPEVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLAV--SSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV-------EYVSDQ--------WKVLGTWNTAFGLNHSRTVEQM 395
+ G R F L+ + E + Q WK +G WN+ GLN + +
Sbjct: 377 TFNKTDGLRKDFDLDIISLKEEGTEKAAGQVSNHLYKVWKNIGIWNSNSGLNMTDGNKDR 436
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIA 449
+ + NRTL VT+ EPY+M LYG Y +DL+K ++
Sbjct: 437 SNNISDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487
Query: 450 NELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTM 509
N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R +DF+
Sbjct: 488 NILGFIYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 546
Query: 510 PFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 547 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 600
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 644 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 703
Query: 814 STRNFFK 820
ST FFK
Sbjct: 704 STMTFFK 710
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + +V VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 710 KKSKISTYEKMWAFMSSRQQTVLVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 767
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 810
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 457 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDK-GEWNG 515
Query: 725 LIGEL 729
++ EL
Sbjct: 516 MVKEL 520
>gi|348541641|ref|XP_003458295.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Oreochromis niloticus]
Length = 913
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 309/575 (53%), Gaps = 45/575 (7%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP+ E AF+ A+ IN++ + L P+ L +Q + +DS ++ C+
Sbjct: 45 GIFESIESGPSGAE-ELAFKFALNTINRN-RTLLPNTTLTYDIQRINIFDSFEASRKACD 102
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N + V++YP+
Sbjct: 103 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKW---KHQVSDNRDSYYVSLYPDFS 159
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLP 176
+S+ I +++ W T T++Y+ L+ LQ++++ P R ++ IRQLP
Sbjct: 160 SLSRAILDLVHFFKWRTVTVVYDDSTGLIRLQELIK---------APSRYNIRLKIRQLP 210
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+T D +PLLKE+K + E H++ DC + ILKQA + +M +Y +YI + ++
Sbjct: 211 TETKDAKPLLKEMKKAKEFHVIFDCGHEMAAWILKQALAMGMMTEYYHYIFTT----LDL 266
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAA 294
+D + ++ N+T R++N N + SI+ W E + + + + +AA
Sbjct: 267 FALDMEPYRYSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA 326
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAV++ A A+Q ++ + L C W+ G NL+K DG+TGR+ +
Sbjct: 327 LMYDAVHVVAVAVQQ--SQQITVSSLQCNRHKPWRFGGRFINLIKEAHWDGLTGRVLFNK 384
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + + + +GTW+ GLN + T + + + N++L V++
Sbjct: 385 TNGLRTDFDLDVISLKEEGLEKIGTWDPPSGLNMTETHKSKTSNITDSLANKSLRVST-- 442
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
EPY+M LYG Y +DL++ +++ L F Y+ L + YG
Sbjct: 443 -------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELSSILGFRYELRLVEDGKYGA 495
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
L+ TG+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP P
Sbjct: 496 LDESTGQWNGMVRELMDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNP 555
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 556 GVFSFLNPLSPDIWMYILLACLGVSCVLFVIARFS 590
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 71/117 (60%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP + + E + F + +++ + +A+STR+V G
Sbjct: 584 FVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 643
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I YG VE G+T FFK
Sbjct: 644 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIPYGVVEDGATMTFFK 700
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K + +S Y +M M S R SV VK+ +EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 700 KKTKISTYDKMWEFMNSRRQSVMVKNVEEGIQRVLT--SDYAFLMESTTIEFVTQRNCNL 757
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DS+ YG+ P S + K + +L+ +G+ +MMK
Sbjct: 758 TQIGGLIDSRAYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ +++ L F Y+ L + YG L+ TG+WNG
Sbjct: 446 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELSSILGFRYELRLVEDGKYGALDESTGQWNG 505
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 506 MVRELMDH 513
>gi|449283827|gb|EMC90421.1| Glutamate receptor, ionotropic kainate 1, partial [Columba livia]
Length = 881
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 302/582 (51%), Gaps = 50/582 (8%)
Query: 5 GIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++ C+
Sbjct: 7 GIFETVENEPVNIEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRRACDQ 65
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHL 119
+ G+AA+FGP + + ++S+C ++PH++ W K+ N +N+YP+
Sbjct: 66 LALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRW---KHPTADNKDAFYINLYPDYTA 122
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
IS+ + ++ +W T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 123 ISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLPSGN 175
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
D RPLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++ +
Sbjct: 176 KDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTT----LDLFAL 231
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKIEAALMY 297
D + ++ N+T R++N NP + S++ W E + + + EAALMY
Sbjct: 232 DLEPYRYSGVNMTGFRLLNIDNPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMY 291
Query: 298 DAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMK----SITI------DGMT 347
DAVY+ A A Q + + L C W+ G NL+K S+ + DG+T
Sbjct: 292 DAVYMVAVASQRASQMTV--SSLQCHRHKPWRFGPRFMNLIKEARKSVFVFTQARWDGLT 349
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI + G R F L+ + + + +G WN+ GLN + + + + + NRT
Sbjct: 350 GRITFNKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSGLNMTDSNKDRSTNITDSLANRT 409
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ +PY+M LYG Y +DL+K ++N L F Y+ L
Sbjct: 410 LIVTT---------ILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLV 460
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYR
Sbjct: 461 SDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYR 519
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 520 KPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 561
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 605 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 664
Query: 814 STRNFFK 820
ST FFK
Sbjct: 665 STMTFFK 671
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 671 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 728
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 729 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 771
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M LYG Y +DL+K ++N L F Y+ L + YG N + G+WNG
Sbjct: 418 DPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDK-GEWNG 476
Query: 725 LIGEL 729
++ EL
Sbjct: 477 MVKEL 481
>gi|432945249|ref|XP_004083506.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Oryzias
latipes]
Length = 911
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 310/579 (53%), Gaps = 45/579 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP+ E AF+ A+ IN++ + L P+ L +Q + +DS ++
Sbjct: 39 LRFGGIFESIESGPSGAE-ELAFKFALNTINRN-RTLLPNTTLTYDIQRINIFDSFEASR 96
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N + V+++
Sbjct: 97 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKW---KHQVSDNRDSYYVSLF 153
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TI 172
P+ +S+ I +++ W T T++Y+ L+ LQ++++ P R ++ I
Sbjct: 154 PDFSSLSRAILDLVHFFKWRTVTVVYDDSTGLIRLQELIK---------APSRYNIRLKI 204
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
RQLP +T D +PLLKE+K + E H++ DC + ILKQA + +M +Y +YI +
Sbjct: 205 RQLPTETKDAKPLLKEMKKAKEFHVIFDCGHEMAAWILKQALAMGMMTEYYHYIFTT--- 261
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVK 290
++ +D + ++ N+T R++N N + SI+ W E + + + +
Sbjct: 262 -LDLFALDMEPYRFSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMT 320
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
+AALMYDAV++ A A+Q ++ + L C W+ G NL+K DG+TGR+
Sbjct: 321 TDAALMYDAVHVVAVAVQQ--SQQITVSSLQCNRHKPWRFGGRFINLIKEAHWDGLTGRV 378
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +GTW+ GLN + T + + + N++L V
Sbjct: 379 LFNKSNGLRTDFDLDVISLKEEGLEKIGTWDPPSGLNMTETHKSKTSNITDSLANKSLRV 438
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
++ EPY+M LYG Y +DL++ ++ L F Y+ L +
Sbjct: 439 ST---------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELSGILGFRYELRLVEDG 489
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG L+ TG+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 490 KYGALDESTGQWNGMVRELMDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPN 549
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ A LGVS +LF +AR S
Sbjct: 550 GTNPGVFSFLNPLSPDIWMYILLACLGVSCVLFVIARFS 588
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I YG VE G
Sbjct: 632 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIPYGVVEDG 691
Query: 814 STRNFFK 820
+T FFK
Sbjct: 692 ATMTFFK 698
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K + +S Y +M M S R SV VK+ +EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 698 KKTKISTYDKMWEFMNSRRQSVMVKNVEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 755
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DS+ YG+ P S + K + +L+ +G+ +MMK
Sbjct: 756 TQIGGLIDSRAYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 798
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L F Y+ L + YG L+ TG+WNG
Sbjct: 444 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELSGILGFRYELRLVEDGKYGALDESTGQWNG 503
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 504 MVRELMDH 511
>gi|189237606|ref|XP_968606.2| PREDICTED: similar to AGAP000803-PA [Tribolium castaneum]
Length = 932
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 311/583 (53%), Gaps = 51/583 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ +VG F AF+ A+ +N + I P+ V DS +K +C
Sbjct: 30 VDVVGFFDEKNGLSEIAFQTAISNLN----IMKNSIRFNPLSTVVNTSDSFENSKFLCET 85
Query: 61 TSEG-IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHL 119
G + +F S + IIES+ +IP V+ W P+ + VNVYP L
Sbjct: 86 AEAGKVGGVFCATSAKIAPIIESVSDNLNIPAVQVAWRPSATYTDM----LVNVYPLPKL 141
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
+ +G+ I+ ++ W + + YE+ +NL+ LQ VL+ D S+ +++L P
Sbjct: 142 LFQGLGAIVRNLQWRSVVVFYESAENLIPLQDVLKT---QDYNGGNKYNSLMLKELGPGP 198
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
D YR LK+I+N SE I+LDC + VTIL+QAKE+ L+ + +Y L+ ++AHTV
Sbjct: 199 D-YRSALKQIQNKSEYRIILDCKTENIVTILRQAKELKLLEPHFSYFLTS----LDAHTV 253
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYD 298
DF+ ANITTVR+ +P + + + ++ W Y + +N+ +VK E ALM+D
Sbjct: 254 DFKLLNTT-ANITTVRIFDPASDNFQYAISNWNNYVKKMNIPGVNLDPYSVKTETALMHD 312
Query: 299 AVYLFAAALQSLGE--RKPLPTPLSCENPSSWQHGLGIGNLMKSIT--IDGM---TGRIN 351
AV++F + L + PT LSCEN W G I + +K+ T DG+ T I+
Sbjct: 313 AVHMFLKCITDLHATGKSVKPTKLSCENVDKWTPGFDIASFIKAYTHDTDGLYSTTAPIS 372
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFG--LNHSRTVEQMDKEKKEKIENRTLT 409
D+ GRR +FS+ VE D V+ WN + L ++ E +KE + K +T
Sbjct: 373 FDN-LGRRTNFSIFVVEGNRDD--VVAKWNPSDPEVLQFLKSEEDRNKELERKWSEGIVT 429
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGEL---------YGYSVDLIKMIANELNFTYKFVL 460
R+ G PY+M + E G+S+DLI ++A +LN ++F +
Sbjct: 430 T--------RI---GPPYLMVKEQKSETDLLEGNNRYEGFSMDLIALLAKDLNIKFRFEV 478
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ G + T WNGLI E+ ++RA+LAICDLTIT +RR VDF+ PFM LGISILY
Sbjct: 479 LKSGQRGAYDKTTKSWNGLIREILDRRAELAICDLTITPDRREVVDFSTPFMRLGISILY 538
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
RK K+ D+++FL+P S +W+Y AT YL ++++LFF++RIS
Sbjct: 539 RKAEAKEADMYAFLDPFSLKLWMYSATLYLALTVVLFFISRIS 581
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK-YAFFMESTGIEYEVEKNCD 631
+ SN SLYQRM +AME ++PSVF +SN GV RV EK + YAF MES+ +EY+++ CD
Sbjct: 691 RESNYSLYQRMWTAMEQAKPSVFEQSNDAGVARVQNEKNRLYAFLMESSTLEYQIQTKCD 750
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
L QVG LDSKGYGIAMP + + A LR+ QGE +K+
Sbjct: 751 LKQVGNWLDSKGYGIAMPLD-YPHRSRINEALLRLQEQGEINRLKD 795
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ ++ RL A MWWFFT+I+ +SY ANLAAFLTN R I + EDLAK +IKYG ++ G
Sbjct: 625 KGMAPRLAASMWWFFTIIVTNSYMANLAAFLTNERSQSEINSAEDLAKQTKIKYGTLDGG 684
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 685 STQGFFR 691
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 656 KFSFGFAKLRVLFQGEPYMMKNPETGEL---------YGYSVDLIKMIANELNFTYKFVL 706
K+S G R+ G PY+M + E G+S+DLI ++A +LN ++F +
Sbjct: 422 KWSEGIVTTRI---GPPYLMVKEQKSETDLLEGNNRYEGFSMDLIALLAKDLNIKFRFEV 478
Query: 707 ERENTYGTLNPQTGKWNGLIGELQEQ 732
+ G + T WNGLI E+ ++
Sbjct: 479 LKSGQRGAYDKTTKSWNGLIREILDR 504
>gi|348518830|ref|XP_003446934.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Oreochromis
niloticus]
Length = 897
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 299/574 (52%), Gaps = 36/574 (6%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E+ + AF+ AV IN++ K L P+ L +Q + +D ++
Sbjct: 25 LRIGGIFETRESELVSTDELAFKFAVNNINRN-KTLMPNTTLTYDIQRINLFDGFEASRR 83
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ + G+ A+FGP + + ++S+C ++PH++ W + +N+YPE
Sbjct: 84 VCDQLALGVVAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDTFFINLYPE 141
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
I++ I ++ W T++YE L+ +Q++++ + +I+ IRQL
Sbjct: 142 YTAIARAILDVVTFFKWRKLTVVYEDSTGLMRMQELIKAPAKFNLKIK-------IRQLT 194
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D RPLLKE+K E I+ DCS +LKQ + +M +Y ++ + ++
Sbjct: 195 PGNQDARPLLKELKKDKEFFIIFDCSYRMAAELLKQLSSMGMMTEYYHFFFTT----LDL 250
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV-KIEAAL 295
+D + ++ N+T R++N +P + S M+ W E + + + + V +AAL
Sbjct: 251 FALDLEPYRYSGVNMTGFRLLNIDDPWVASTMDRWAMERLQGPKQESGLMDGVMTTDAAL 310
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
MYDAVY+ A A Q + + L C W+ G NL K DG+TG I L+
Sbjct: 311 MYDAVYMVAVASQRATQMTV--SSLQCHRHKPWRFGPRFMNLFKEAQWDGLTGHIVLNKT 368
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
G R F L+ + D + WN+ G+N + ++ +++K N T ++ ++T
Sbjct: 369 DGLRRDFDLDIISLKEDGIARIAVWNSYRGMNLT------EESRRDKNNNVTDSLANRTL 422
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
+L PY+M EL G Y +DL+K ++N L FTY+ L + YG
Sbjct: 423 IVTTIL--ENPYVMLRKSDKELVGNDRYEGYCLDLLKELSNILGFTYEVRLVADGKYGAQ 480
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
N + G+WNG++ EL + ADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 481 NDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 539
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A GVS +LF +AR +
Sbjct: 540 VFSFLNPLSPDIWMYVLLACTGVSCVLFVIARFT 573
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK RI+YG V G
Sbjct: 617 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMDAPIDSADDLAKQTRIEYGAVRDG 676
Query: 814 STRNFFK 820
ST FFK
Sbjct: 677 STMTFFK 683
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 683 KKSKISTYEKMWAFMSSRKNTALVKNNREGITRVLTTD--YAMLMESTSIEYISQRNCNL 740
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 741 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 783
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M EL G Y +DL+K ++N L FTY+ L + YG N + G+WNG+
Sbjct: 431 PYVMLRKSDKELVGNDRYEGYCLDLLKELSNILGFTYEVRLVADGKYGAQNDK-GEWNGM 489
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 490 VRELIDHV 497
>gi|21594363|gb|AAH31822.1| Grik1 protein [Mus musculus]
gi|55777102|gb|AAH49275.1| Grik1 protein [Mus musculus]
Length = 832
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 282/542 (52%), Gaps = 41/542 (7%)
Query: 34 PDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE 93
P+ L +Q + +DS ++ C+ + G+AA+FGP + + ++S+C ++PH++
Sbjct: 2 PNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQ 61
Query: 94 AFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVL 153
W + + +N+YP+ IS+ + ++ +W T T++YE L+ LQ+++
Sbjct: 62 TRWKHPS--VDNRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELI 119
Query: 154 ENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQA 213
+ + +I+ IRQLP D +PLLKE+K E +++ DCS + ILKQ
Sbjct: 120 KAPSRYNIKIK-------IRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 172
Query: 214 KEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIY 273
+ +M +Y +Y + ++ +D + ++ N+T R++N NPH+ SI+ W
Sbjct: 173 LFMGMMTEYYHYFFTT----LDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSM 228
Query: 274 EENERGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSS 327
E + R ET + EAALMYDAVY+ A A + + L C
Sbjct: 229 ERLQAPP----RPETGLLDGVMTTEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKP 282
Query: 328 WQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLN 387
W+ G NL+K DG+TGRI + G R F L+ + + + +G WN+ GLN
Sbjct: 283 WRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLN 342
Query: 388 HSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YS 441
+ + + NRTL VT+ EPY+M LYG Y
Sbjct: 343 MTDGNRDRSNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYC 393
Query: 442 VDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSER 501
+DL+K ++N L F Y L + YG N + G+WNG++ EL + RADLA+ LTIT R
Sbjct: 394 LDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVR 452
Query: 502 RAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
+DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR
Sbjct: 453 EKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 512
Query: 562 IS 563
+
Sbjct: 513 FT 514
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 558 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 617
Query: 814 STRNFFK 820
ST FFK
Sbjct: 618 STMTFFK 624
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 624 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 681
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 682 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 724
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 371 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 429
Query: 725 LIGEL 729
++ EL
Sbjct: 430 MVKEL 434
>gi|410915846|ref|XP_003971398.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Takifugu
rubripes]
Length = 971
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 299/575 (52%), Gaps = 40/575 (6%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E+ + AF+ AV IN++ K L P+ L +Q + +D ++
Sbjct: 25 LRIGGIFETRESELVSMDELAFKFAVNNINRN-KTLIPNTTLTYDIQRINLFDGFEASRR 83
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD-PNKYFIPTNGVHGVNVYP 115
+C+ + G+ A+FGP + + ++S+C ++PH++ W P+ + +N+YP
Sbjct: 84 VCDQLALGVVAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS---VDNKDTFFINLYP 140
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
E I++ I ++ W T++YE L+ +Q++++ + +I+ IRQL
Sbjct: 141 EYTAIARAILDVVTFFKWKKLTVVYEDSTGLMRMQELIKAPAKFNLKIK-------IRQL 193
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D RPLLKE+K E IL DCS +LKQ + +M +Y ++ + ++
Sbjct: 194 TPGNQDARPLLKELKRDKEFFILFDCSYWMAAELLKQLSSMGMMTEYYHFFFTT----LD 249
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV-KIEAA 294
+D + ++ N+T R++N NP + S M+ W E + + + + + +AA
Sbjct: 250 LFALDLEPYRYSGVNMTGFRLLNVDNPWVASTMDKWAMERLQGPKQESGLMDGIMTTDAA 309
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAV++ A A Q + + L C W+ G NL K DG+TG I L+
Sbjct: 310 LMYDAVFMVAVASQRATQMTV--SSLQCHRHKPWRFGPRFMNLFKEAQWDGLTGHIVLNK 367
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + D + WN+ G+N + + ++ + + + NRTL VT+
Sbjct: 368 TDGLRRDFDLDIISLKEDGAARIAVWNSYKGMNLTDSRDK-NSNVTDSLANRTLIVTT-- 424
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
PY+M EL G Y +DL+K ++N L FTY+ L + YG
Sbjct: 425 -------ILENPYVMYKKSDKELVGNDRFEGYCLDLLKELSNILGFTYEVRLVADGKYGA 477
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
N + G+WNG++ EL + ADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 478 QNDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A GVS +LF +AR +
Sbjct: 537 GVFSFLNPLSPDIWMYVLLACTGVSCVLFVIARFT 571
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK RI+YG V G
Sbjct: 615 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMDAPIDSADDLAKQTRIEYGAVRDG 674
Query: 814 STRNFFK 820
ST FFK
Sbjct: 675 STMTFFK 681
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 681 KKSKISTYEKMWAFMSSRKNTALVKNNQEGITRVLTTD--YAMLMESTSIEYISQRNCNL 738
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 739 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 781
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M EL G Y +DL+K ++N L FTY+ L + YG N + G+WNG+
Sbjct: 429 PYVMYKKSDKELVGNDRFEGYCLDLLKELSNILGFTYEVRLVADGKYGAQNDK-GEWNGM 487
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 488 VRELIDHV 495
>gi|383861888|ref|XP_003706416.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Megachile
rotundata]
Length = 902
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 308/586 (52%), Gaps = 74/586 (12%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCNATSE 63
IF +EE AF A + F+ + P LE + + V+ N DS TA C E
Sbjct: 15 AIFHAGDEEHKAAFLKAA--YDTRFQDVAPTFELEAVTKLVDSNTDSFKTAAAACELIQE 72
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI----PTNGV-HGVNVYPESH 118
G+ AIFGP S ++ S+ FDIPH++ W N+ P N + +N+YP+S
Sbjct: 73 GVVAIFGPSSPHTYAVVASIAAKFDIPHIDYVWRLNEEVEADKEPKNPMPMTINIYPDSD 132
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
++ K I+ ++ M W+TF IY+T+D L +Q+ L D I TIR+L
Sbjct: 133 MVGKAIADVVESMKWNTFVAIYQTNDGLSRIQKSLSLRRKKDGVI-------TIRKLN-G 184
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
DYRP+LKEI+ S +++D + V +L QAKEV L+ DY N++++ ++++
Sbjct: 185 AGDYRPILKEIRALSICDVIIDVEPNNIVDVLYQAKEVKLLADYCNFLIT----YLDSTK 240
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVK-IEAALMY 297
+ D + N T +I G EN+ E + +E+A++Y
Sbjct: 241 LPVSDIR------------NETGANI----TGLSLREND--------MEGINWVESAVLY 276
Query: 298 DAVYLFAAALQSLGERKPL--------PTPLSCENPSSWQHGLGIGNLMKSITIDG-MTG 348
D+V+L A+ +L R P PLSCE + G I +L++ + +G +TG
Sbjct: 277 DSVFLLYNAMNALNARNKDNEDSVTIDPVPLSCEEAEKYAAGPNITSLIRELAKEGKITG 336
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
+ +D + GRR F++ ++ D W+ GL+ ++ + + IE +
Sbjct: 337 PMAID-ENGRRQYFNIRIMDLRPDGSVQTSYWDPD-GLHLIENEQERESYLYKSIELKKF 394
Query: 409 TVTSKTFAKLRVLFQGEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTYKFV 459
+T+K G PY+M+ ++ G+ +DLI+ I+ L F Y+F
Sbjct: 395 KITTKL---------GPPYVMEVTDSATRGILIEQKRYEGFCIDLIEEISKLLKFKYEFE 445
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
L + YG+ +T +WNGLI L ++ ADLAICDLTIT ER +AVDFTMPFM LGISIL
Sbjct: 446 LVPDGNYGSYVKETKQWNGLIRRLLDRDADLAICDLTITYERESAVDFTMPFMNLGISIL 505
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
YRKP +K+PDLFSFL PLS VW+YMATA+L VS++LF ARI+ G
Sbjct: 506 YRKPEEKEPDLFSFLSPLSTHVWIYMATAFLVVSVMLFLQARIAPG 551
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM +AM +RPSVF KSN EGVERV+K K YAF MEST IEY +E+NCDL
Sbjct: 659 RDSNYSTYQRMWAAMMEARPSVFTKSNDEGVERVLK-KYDYAFLMESTTIEYRMERNCDL 717
Query: 633 MQVGGLLDSKGYGIAMP 649
+VGGL+D+KGYGIA+P
Sbjct: 718 DKVGGLIDNKGYGIALP 734
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A S R+VAGMWWFFTLIM+SSYTANLAAFLT +M+ PIK VEDLAK +IKYG V+ GS
Sbjct: 594 APSIRMVAGMWWFFTLIMVSSYTANLAAFLTVDKMDTPIKGVEDLAKQTKIKYGAVDGGS 653
Query: 815 TRNFFK 820
T FF+
Sbjct: 654 TSAFFR 659
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 670 GEPYMMKNPETG---------ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M+ ++ G+ +DLI+ I+ L F Y+F L + YG+ +T
Sbjct: 401 GPPYVMEVTDSATRGILIEQKRYEGFCIDLIEEISKLLKFKYEFELVPDGNYGSYVKETK 460
Query: 721 KWNGLIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
+WNGLI L ++ D I + S + F F+N +S
Sbjct: 461 QWNGLIRRLLDRDADLAICDLTITYERESAVDFTMPFMNLGIS 503
>gi|327268615|ref|XP_003219092.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Anolis
carolinensis]
Length = 911
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/590 (32%), Positives = 299/590 (50%), Gaps = 59/590 (10%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ L DI Q + +DS ++
Sbjct: 36 LRIGGIFETMENEPLNVEELAFKFAVTNINRN-TTLTYDI------QRINLFDSFEASRR 88
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + +N+YP+
Sbjct: 89 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPT--VDNKDSFYINLYPD 146
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ + ++ +W T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 147 YAAISRAVLDLVLHYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 199
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D RPLLKE+K E +++ DCS D ILKQ + +M +Y +Y + ++
Sbjct: 200 SGNKDARPLLKEMKKGKEFYVIFDCSHDTAAEILKQILSMGMMTEYYHYFFTT----LDL 255
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKIEAA 294
+D + ++ N+T R++N N ++ S++ W E + + + EAA
Sbjct: 256 FALDLEPYRYSGVNMTGFRLLNIDNVYVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAA 315
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
L+YDAVY+ A A Q + + L C W+ G NL+K DG+TGRI +
Sbjct: 316 LIYDAVYMVAVASQRASQMTV--SSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNK 373
Query: 355 QTGRRNSFSLEFVE---------------YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEK 399
G R F L+ + ++ WK +G WN+ GLN + + +
Sbjct: 374 TDGLRKDFDLDIISLKEEGTEKAAGEVTNHLYKVWKKIGVWNSNSGLNMTDSNKDRSTNI 433
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELN 453
+ + NRTL VT+ +PY+M LYG Y +DL+K ++N L
Sbjct: 434 TDSLANRTLIVTT---------ILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILG 484
Query: 454 FTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMT 513
F Y+ L + YG N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMT
Sbjct: 485 FIYEVKLVSDGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMT 543
Query: 514 LGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 544 LGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 593
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 637 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 696
Query: 814 STRNFFK 820
ST FFK
Sbjct: 697 STMTFFK 703
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 703 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 760
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 761 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 803
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M LYG Y +DL+K ++N L F Y+ L + YG N + G+WNG
Sbjct: 450 DPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDK-GEWNG 508
Query: 725 LIGEL 729
++ EL
Sbjct: 509 MVKEL 513
>gi|426328983|ref|XP_004025525.1| PREDICTED: glutamate receptor, ionotropic kainate 3, partial
[Gorilla gorilla gorilla]
Length = 919
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 283/528 (53%), Gaps = 49/528 (9%)
Query: 52 HTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGV 111
H C+ + G+ AIFGP N ++S+C ++PH++ W + + V
Sbjct: 93 HCQYSTCDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYV 150
Query: 112 NVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV- 170
N+YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 151 NLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIR 201
Query: 171 -TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSL 229
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 202 LKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT 261
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 262 ----LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESG 313
Query: 289 -----VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSI 341
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 314 LLDGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEA 369
Query: 342 TIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE 401
+G+TGRI + +G R F L+ + D + +G W+ A GLN + + +
Sbjct: 370 QWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTD 429
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFT 455
+ NR+L VT+ VL EP++M LYG Y +DL+K +A+ L F+
Sbjct: 430 SLTNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS 480
Query: 456 YKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
Y+ L + YG + + G+WNG++ EL + +ADLA+ LTIT R A+DF+ PFMTLG
Sbjct: 481 YEIRLVEDGKYGAQDDK-GQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLG 539
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+SILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 540 VSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 631 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 690
Query: 814 STRNFFK 820
+T FFK
Sbjct: 691 ATMTFFK 697
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 697 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 753
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 754 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 787
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 444 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 502
Query: 725 LIGEL 729
++ EL
Sbjct: 503 MVKEL 507
>gi|9837162|gb|AAG00455.1| glutamate receptor 5 [Devario aequipinnatus]
Length = 880
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 302/592 (51%), Gaps = 58/592 (9%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E + AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETLENEPISVEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD-PNKYFIPTNGVHGVNVYP 115
C+ + G+AA+FGP + + ++S+C ++PH++ W P+ + +N+YP
Sbjct: 96 ACDQLALGVAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS---VDNKDSFYINLYP 152
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI--R 173
+ IS+ + I+ W T++YE L+ LQ++++ P R S+ I R
Sbjct: 153 DYASISRAVLDIVQFYKWKAVTVVYEDATGLIRLQELIK---------APSRYSIKIKIR 203
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
QLP + D RPLLKE+K E ++ DCS +LKQ + +M +Y ++ +
Sbjct: 204 QLPTGSKDARPLLKEMKKGKEFCVIFDCSFQTAADVLKQLLSMGMMTEYYHFFFTT---- 259
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER--GRSLNVRAETVKI 291
++ +D + ++ N+T R++N NP + S++ W E + + +
Sbjct: 260 LDLFALDLEPYRYSGVNMTGFRLLNIDNPQVASVVEKWSMERLQAPPKPETGLLDGMMTT 319
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
EAALMYDAVY+ AAA Q + + L C W+ G ++ K +G+TG+I
Sbjct: 320 EAALMYDAVYMVAAASQRASQITV--SSLQCHRHKPWRFGSRFISMFKEAQWNGLTGQII 377
Query: 352 LDSQTGRRNSFSLEFVEYVSDQ--------------WKVLGTWNTAFGLNHSRTVEQMDK 397
++ G R F ++ + D WK +G WN+ GLN + + + +
Sbjct: 378 INKTDGLRKDFDMDIISLKEDGMEKPFMESGRLNKVWKKVGVWNSNTGLNLTDSNKDKNT 437
Query: 398 EKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANE 451
+ + NRTL VT+ PY+M LYG Y +DL+K ++N
Sbjct: 438 NVTDSMANRTLIVTT---------ILENPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNI 488
Query: 452 LNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPF 511
L F+Y+ L + YG N + G+WNG++ EL + ADLA+ LTIT R +DF+ PF
Sbjct: 489 LGFSYEAKLVSDGKYGAQNDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPF 547
Query: 512 MTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
MTLGISILY KP P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 548 MTLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 599
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK +I+YG V G
Sbjct: 643 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDG 702
Query: 814 STRNFFK 820
ST FFK
Sbjct: 703 STMTFFK 709
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG++RV+ YA MEST IEY ++NC+L
Sbjct: 709 KKSKISTYEKMWAFMSSRKNTALVKNNREGIQRVLTTD--YALLMESTSIEYISQRNCNL 766
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 767 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 809
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M LYG Y +DL+K ++N L F+Y+ L + YG N + G+WNG+
Sbjct: 457 PYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFSYEAKLVSDGKYGAQNDK-GEWNGM 515
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 516 VRELIDHV 523
>gi|270014114|gb|EFA10562.1| hypothetical protein TcasGA2_TC012818 [Tribolium castaneum]
Length = 885
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 300/539 (55%), Gaps = 73/539 (13%)
Query: 43 QHVENYDSLHTAKLMCNATSEG--IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNK 100
Q + DS + KL+CN T EG +AAIF ++ I ES+ +IP + W P
Sbjct: 91 QILAQNDSFYCCKLLCNVTQEGSGLAAIFA-----SKPIFESLSNRLEIPFILTKWRPAS 145
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
Y +N VN +P+S+L S G+++I+ ++ W F ++Y++ LV LQQ+L+ + +
Sbjct: 146 Y---SNKQTTVNFFPDSYLFSHGLAIIVKNLQWKNFVLLYDSDKGLVKLQQILKLNNFNS 202
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM- 219
SV +RQL P D +RPLLKEI+ + + I+LDC + + ILKQAKEV+LM
Sbjct: 203 G-------SVIVRQLGPGPD-HRPLLKEIRALNHNRIILDCDTENIIEILKQAKEVNLME 254
Query: 220 GDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG 279
Y NY L+ ++AHT+DF ANITT+R+++ T + N
Sbjct: 255 SSYFNYFLTS----VDAHTLDFSVLNTT-ANITTIRILDFTQT-----------QSNYST 298
Query: 280 RSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLM 338
R+ E AL+ D ++ F ++ +L +P+ P+P++C+ W HG I + M
Sbjct: 299 RT----------ETALIQDGIHSFITSVNTLHVTEPIVPSPMACDQ--KWSHGFRISSFM 346
Query: 339 KSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW---NTAFGLNHSRTVEQM 395
+ G +G I DS +GRR +F++ VE ++ V+ W N + +
Sbjct: 347 RVREFFGASGPIGFDS-SGRRLNFTIFVVE--GNRENVVAKWRPENPEILIYMRGENDSF 403
Query: 396 DKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNPE-TGELY-------GYSVDLIK 446
D K ++ L ++S+ G PY+M + P GE+ G+S+DLI
Sbjct: 404 DALVKN-MQKSVLIISSRL---------GPPYLMERKPRFEGEILTGNSRYEGFSMDLID 453
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA L F Y+F L ++ YG +P+T WNGLI +L +++ADLAICDLTIT +RR VD
Sbjct: 454 AIAGILGFKYEFRLAKDGKYGNYDPETKSWNGLIKDLLDRKADLAICDLTITHQRREVVD 513
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
F+MPFM LGISILY+K +K ++F+FLEP S ++W+Y AT YL VS++L+ +AR++ G
Sbjct: 514 FSMPFMRLGISILYKKAEEKDVNIFAFLEPFSPEIWIYTATLYLVVSVILYLVARMAPG 572
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK-YAFFMESTGIEYEVEKNCD 631
+ SN S YQ+M + M ++P VF K+N +GV+RV K + YAF MES+ IEYE+E CD
Sbjct: 680 RESNYSTYQKMWTTMIQAKPGVFEKNNADGVKRVQTTKNRLYAFLMESSQIEYEIETKCD 739
Query: 632 LMQVGGLLDSKGYGIAMP 649
L QVG LD+K YGIAMP
Sbjct: 740 LKQVGNWLDNKEYGIAMP 757
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ +S+RL MWWFF+LIM SSYTANLAAFLT R+ P I + E LAK +IKYG VE G
Sbjct: 614 KGISSRLATSMWWFFSLIMTSSYTANLAAFLTMERLEPTIDSAEALAKQTKIKYGTVEGG 673
Query: 814 STRNFFK 820
+T+ FF+
Sbjct: 674 ATQAFFR 680
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 670 GEPYMM-KNPE-TGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M + P GE+ G+S+DLI IA L F Y+F L ++ YG +P+T
Sbjct: 422 GPPYLMERKPRFEGEILTGNSRYEGFSMDLIDAIAGILGFKYEFRLAKDGKYGNYDPETK 481
Query: 721 KWNGLIGELQEQ 732
WNGLI +L ++
Sbjct: 482 SWNGLIKDLLDR 493
>gi|291239939|ref|XP_002739876.1| PREDICTED: glutamate receptor, ionotropic, kainate 2-like
[Saccoglossus kowalevskii]
Length = 819
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 280/510 (54%), Gaps = 40/510 (7%)
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKG 123
G+AA+FGP + ++ ++S+ + ++PHVEA WD + + +N+YP LIS+
Sbjct: 2 GVAAVFGPPTSKSATAVQSVLKELEVPHVEANWDHRRL----HDRFSINLYPAPSLISRA 57
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
I+ + W ++YE ++LV LQ V++ + ++++RQL P +++
Sbjct: 58 IADAVGHYKWKKIAVLYENEESLVRLQDVIKLSSQL-------HITISVRQLVPP--NFK 108
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
+LKEIKN SH+++DC + +L+QA EV ++ +Y + + H +D +
Sbjct: 109 SVLKEIKNRGLSHVIVDCEFVHVIEVLEQALEVQMLTHNFHYFFTSPDF----HLLDVER 164
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
+ G N+T+ RMIN +P +++++ W + E L R T E AL+YDAV +F
Sbjct: 165 YSEGGVNLTSFRMINEDDPKVQTLLREWRIRQREEDVPLQRRNMTT--EVALIYDAVDVF 222
Query: 304 AAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSIT-IDGMTGRINLDSQTGRRNS 361
AL+SL + L LSC+ P++W +GL + N + + G+TGRI D + G R
Sbjct: 223 TQALESLDIGQSLTVRELSCQKPTTWHYGLSLFNHLSYVNNWQGITGRIQFD-ENGLRTY 281
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
++ +E V + + +G W A G N++ + D E ++N+T VT+
Sbjct: 282 VKMDLMELVGSRLQKVGFWEPATGTNYTMKSGRTDDNSTESLKNKTFIVTT--------- 332
Query: 422 FQGEPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
PY+M K E G++ G+ VDL++ I+ L F YK L + YG +
Sbjct: 333 ILENPYVMRKKAENGKVLVGNDQYEGFCVDLLEEISQILGFKYKIELVPDGKYGAPE-ED 391
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
G+WNG++G+L ++ADLA+ LTI+ R +DF P+M GISILYR P K P +FSF
Sbjct: 392 GQWNGMVGQLIARKADLAVAPLTISYIREKVIDFAKPYMNTGISILYRVPESKNPGVFSF 451
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L PL FD+W+YM AYLGVS+ LF LAR S
Sbjct: 452 LSPLDFDIWLYMLLAYLGVSVSLFILARFS 481
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+V+GMWWFF+LI+ISSYTANLAAFLT RM PIK+V+DLA +I+YG + GS
Sbjct: 526 ALSTRVVSGMWWFFSLIIISSYTANLAAFLTVERMVSPIKDVDDLASQTKIEYGTLSSGS 585
Query: 815 TRNFFK 820
T FFK
Sbjct: 586 TTTFFK 591
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+SSGS + KNSN+ +YQRM S M S +PSVFV + + G+ERV+ K YAF ME T
Sbjct: 581 LSSGSTTTF-FKNSNIEIYQRMWSFMSSRQPSVFVSTTEAGIERVLNSK-NYAFLMEVTF 638
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY +NC+L Q+GGLLDSK YGI P
Sbjct: 639 NEYVTARNCNLTQIGGLLDSKFYGIGTP 666
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 672 PYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
PY+M K E G++ G+ VDL++ I+ L F YK L + YG + G+WN
Sbjct: 337 PYVMRKKAENGKVLVGNDQYEGFCVDLLEEISQILGFKYKIELVPDGKYGAPE-EDGQWN 395
Query: 724 GLIGEL 729
G++G+L
Sbjct: 396 GMVGQL 401
>gi|325297076|ref|NP_001191543.1| glutamate receptor subunit protein GluR7 precursor [Aplysia
californica]
gi|31074389|gb|AAP41209.1| glutamate receptor subunit protein GluR7 [Aplysia californica]
Length = 890
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 300/569 (52%), Gaps = 43/569 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I +F P+ E A E AV IN L ++L V DS + +C
Sbjct: 28 LRIGALFEPDYEGQWRALEWAVEEINLKSDLLAGTLVLVD-RDTVPPQDSFTAQRKVCRM 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNK---YFIPTNGVHGVNVYPES 117
+ EGIAA+FGP S ++SMC F+IPH++ WDP YF +++YP
Sbjct: 87 SQEGIAAMFGPVSAMTAAHVQSMCNAFEIPHLQWRWDPRDKRDYF-------SISLYPHY 139
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S ++ +W+ FTI+YE ++ L LQ+VL+ A E P + +T+R+L
Sbjct: 140 LTLSTAYKDVVQYWNWNRFTILYEDNEGLTRLQEVLKAA-----ERTPAQ--ITVRKLEM 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DY LLKE++N E ++DC++ L ++ ++ + ++ +
Sbjct: 193 VNSDYLVLLKELQNRGEYRFIVDCNVKTVTRFLHAGLKLKMISELYHFFFTTLD----LG 248
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D D+ G ANIT R+I+P + S+ W++ +S + + E AL Y
Sbjct: 249 LLDLSDYMHGGANITAYRLIDPDREKVISVRTSWLFRSKIGDKSPLMEYSEIDTETALAY 308
Query: 298 DAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
DA LFA AL SL E + + T L C+ +W++G + N MK++ +G++G + ++
Sbjct: 309 DAYVLFAKALHSLSEAQEVNTISLPCDKVHTWRYGNSLLNYMKAMKFEGLSGTVKYEN-- 366
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHS-RTVEQMDKEKKEKIENRTLTVTSKTF 415
G R F L+ + + +G WN GLN S + E +D+ N+ V++
Sbjct: 367 GERYDFDLDLLYLTQNGLHKVGKWNRKSGLNVSLQAAEAVDQGPG----NKVYVVSA--- 419
Query: 416 AKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
++ EPY+++N + + G+ V+L+ MIA NF+Y+ +E +T G G
Sbjct: 420 ------YETEPYVIRNASSPSGFSGFCVELLDMIAKAKNFSYR--IELTDTVGK-EQSNG 470
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
WNG++G L +++AD+ I DLTI R VDFT PF+TLGI+ILY++PA K +LFSFL
Sbjct: 471 SWNGVMGALIDRKADIGIGDLTINLVREQQVDFTKPFLTLGITILYKRPAPKSLNLFSFL 530
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+PLS DVWVYM AYL VS +LF +AR S
Sbjct: 531 QPLSVDVWVYMIAAYLCVSFMLFVIARFS 559
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 122/241 (50%), Gaps = 10/241 (4%)
Query: 589 SSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQV-GGLLDSKG-YGI 646
+S PS F E ++ + K K +++ +E T + + N V G L+D K GI
Sbjct: 430 ASSPSGFSGFCVELLDMIAKAK-NFSYRIELTDTVGKEQSNGSWNGVMGALIDRKADIGI 488
Query: 647 AMPTSKFLAKFSFGFAK-LRVLFQGEPYMMKNPETGELYGY----SVDL-IKMIANELNF 700
T + + F K L Y P++ L+ + SVD+ + MIA L
Sbjct: 489 GDLTINLVREQQVDFTKPFLTLGITILYKRPAPKSLNLFSFLQPLSVDVWVYMIAAYLCV 548
Query: 701 TYK-FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTR 759
++ FV+ R + Y NP + E Q V + F I S++ A+STR
Sbjct: 549 SFMLFVIARFSPYEWCNPHPCNPDTDEVENQFTVMNSLWFTIGSLMQQGCEIAPRALSTR 608
Query: 760 LVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
+VAGMWWFFTLIMISSYTANLAAFLT RM I + +DLAK +IKYG G+T+ FF
Sbjct: 609 MVAGMWWFFTLIMISSYTANLAAFLTVERMVSDINSADDLAKQTKIKYGTFAGGATQEFF 668
Query: 820 K 820
+
Sbjct: 669 Q 669
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN+ + RM + M ++ S FV++ E VERV + G YA+ EST +++ VE+NC+L
Sbjct: 669 QKSNMPPFDRMWNFMNATGESAFVQNLTEAVERV--KTGDYAYITESTTVKFVVERNCNL 726
Query: 633 MQVGGLLDSKGYGIAMPTSKFL 654
MQ+GGLLD+KGYG A P L
Sbjct: 727 MQIGGLLDTKGYGFATPQGSSL 748
>gi|431891080|gb|ELK01957.1| Glutamate receptor, ionotropic kainate 3 [Pteropus alecto]
Length = 929
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 310/624 (49%), Gaps = 98/624 (15%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N EE AF + IN++ + L P+ L +Q + +DS K C+ + G+ AIF
Sbjct: 2 NAEE--HAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIF 58
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP N ++S+C ++PH++ W + + VN+YP+ +S I ++
Sbjct: 59 GPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDYASLSHAILDLVQ 116
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLPPDTDDYRPLLK 187
+ W + T++Y+ L+ LQ+++ + P R ++ IRQLP D+DD RPLLK
Sbjct: 117 YLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQLPLDSDDSRPLLK 167
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSY-----WI------- 234
E+K E I+ DCS ILKQA + +M +Y ++I + L +Y W+
Sbjct: 168 EMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLVTYLRVLAWVGVGLPQN 227
Query: 235 -NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET----- 288
+ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 228 KDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDG 283
Query: 289 -VKIEAALMYDAVYLFAAALQS--------------------------LGERKP----LP 317
+ +AAL+YDAV++ + Q + E P LP
Sbjct: 284 VMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEVSPAPPHLP 343
Query: 318 TPLSCENPSSW---QHGLGIGNLMKSITID---------GMTGRINLDSQTGRRNSFSLE 365
LS +W G G + + ID G+TGRI + +G R F L+
Sbjct: 344 ASLSLSGDLTWASPSRGFEAGTYLSASEIDVVHEKAQWEGLTGRIVFNKTSGLRTDFDLD 403
Query: 366 FVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGE 425
+ D + +G W+ A GLN + + + + NR+L VT+ VL E
Sbjct: 404 IISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDSLTNRSLIVTT-------VL--EE 454
Query: 426 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 479
P++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG+
Sbjct: 455 PFVMFRKSDKTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNGM 513
Query: 480 IGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP P +FSFL PLS
Sbjct: 514 IKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSP 573
Query: 540 DVWVYMATAYLGVSLLLFFLARIS 563
D+W+Y+ AYLGVS +LF +AR S
Sbjct: 574 DIWMYVLLAYLGVSCVLFVIARFS 597
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 641 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 700
Query: 814 STRNFFK 820
+T FFK
Sbjct: 701 ATMTFFK 707
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 707 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 763
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGL+DSKGYGI P
Sbjct: 764 TQIGGLIDSKGYGIGTP 780
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 454 EPFVMFRKSDKTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 512
Query: 725 LIGEL 729
+I EL
Sbjct: 513 MIKEL 517
>gi|307207205|gb|EFN84995.1| Glutamate receptor, ionotropic kainate 2 [Harpegnathos saltator]
Length = 874
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 309/575 (53%), Gaps = 56/575 (9%)
Query: 3 IVGIFGPNEEEVATAFEIAVRRINKDFKALPP--DIILEPIVQHVENYDSLHTAKLMCNA 60
I G+F +E + AFE++V+ +NK+ A ++L + V N ++ + C
Sbjct: 23 IGGLF-DGDEMIQKAFELSVKAVNKNITASEHAMGVLLTAKTEKV-NENAFQVGDIACEL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+A +FGPQ + ++SMC DIPH+ A WDP P G + VN+YP ++ +
Sbjct: 81 LGSGVAGMFGPQGKSTVDHVQSMCDTLDIPHIAARWDPE----PKRG-NMVNLYPHANTL 135
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-PDT 179
S II + W + I+Y+ D+L+ + ++L+ P +++
Sbjct: 136 STVFRDIIAEYQWKEYAILYDNTDSLIRMNRLLQ---------LPNMSTISAMVFHLGGG 186
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
++R ++E+K S ++++DCS D ++L+QA++V +M D N I++ ++ T+
Sbjct: 187 PNFRRTMREVKISGCKNLIIDCSYDILSSVLEQAQQVGIMSDRYNVIVAS----LDLQTL 242
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN---VRAETVKIEAALM 296
D + Q N+T VR+I+P +P +R ++ R RSLN +++E+AL
Sbjct: 243 DLESHQYSGVNLTGVRLIDPDSPTVRRVL---------RSRSLNWGLTDGSHLRVESALA 293
Query: 297 YDAVYLFAAALQSLGER-KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
YDAV LFA+ L + K L C +W HG + N M++ I G++G I D+
Sbjct: 294 YDAVQLFASGYARLRDSVKGNLKKLFCNRTETWGHGFSLSNYMRNERIRGLSGAIRFDTN 353
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNH--SRTVEQMDKEKKEKIENRTLTVTSK 413
G R+ F L+ V + +G W T+ G++ + +D+EK ++ K
Sbjct: 354 -GFRSEFQLDIVNLEKQGLRKVGEWRTSGGIHWKPGYNIPGVDEEK---------SLRDK 403
Query: 414 TFAKLRVLFQGEPY-MMKNP---ETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
F L L +PY M+K TG G+++D+I ++ L F Y F ++ +N YG
Sbjct: 404 HFIVLISL--TDPYGMLKQSAAIRTGNDRYEGFAIDIIHEMSKILGFNYTFHVQSDNIYG 461
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+LN ++G WNG++G++ ADLAI DLTIT+ER +AVDFT PFM LGIS+LYR+P
Sbjct: 462 SLNKKSGSWNGMLGKIIAGEADLAITDLTITAERESAVDFTTPFMNLGISVLYRQPTTAP 521
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
P L SFL P S +VW+++ AY+ V+ LLFF+ ++
Sbjct: 522 PGLLSFLLPYSEEVWMHLIGAYMIVTSLLFFIGKL 556
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNK 600
VW + L + + A+ GS L + KN+ Y+ M++ M + V ++ N+
Sbjct: 637 VWPFKVAEELAYQQKIKYGAK-KDGSTLSF-FKNATHEPYEIMYNYMMNHADEVLMEKNE 694
Query: 601 EGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSF 659
+GV +V +E YA+ MES+ IEY ++ C++ Q+GGLLD+KGYGIAM +++ S
Sbjct: 695 DGVRKVQQEN--YAYLMESSSIEYIKQRKCNVTQIGGLLDAKGYGIAMKKDARYRTDLSG 752
Query: 660 GFAKLR 665
KL+
Sbjct: 753 AILKLK 758
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F +STR +A WWFFTLI+ S+Y ANLAA L+ P K E+LA +IKYG
Sbjct: 598 FAPAGISTRALATAWWFFTLIIGSTYIANLAAALSTKSTVWPFKVAEELAYQQKIKYGAK 657
Query: 811 EMGSTRNFFK 820
+ GST +FFK
Sbjct: 658 KDGSTLSFFK 667
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+++D+I ++ L F Y F ++ +N YG+LN ++G WNG++G++
Sbjct: 433 GFAIDIIHEMSKILGFNYTFHVQSDNIYGSLNKKSGSWNGMLGKI 477
>gi|326674584|ref|XP_683795.5| PREDICTED: glutamate receptor, ionotropic kainate 2 [Danio rerio]
Length = 898
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 192/575 (33%), Positives = 298/575 (51%), Gaps = 63/575 (10%)
Query: 5 GIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
GIF GP+ E AF+ A+ IN++ + L P+ L +Q + +DS ++ C+
Sbjct: 48 GIFESIESGPSGAE-ELAFKFALNTINRN-RTLLPNTTLTYDIQRINIHDSFEASRKACD 105
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESH 118
S G+AAIFGP + N ++S+C +PH++ W K+ + N VN+YP+
Sbjct: 106 QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKW---KHQVSDNRDSFYVNLYPDFS 162
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLP 176
+S+ I +++ W T T++Y+ L+ LQ++++ P R ++ IRQLP
Sbjct: 163 SLSRAILDLVHFFKWKTVTVVYDDSTGLIRLQELIK---------APSRYNIRLKIRQLP 213
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
DT D +PLLKE+K E H++ DC + ILKQ +
Sbjct: 214 ADTKDAKPLLKEMKRGKEFHVIFDCGHEMAAGILKQ----------------------DL 251
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAA 294
+D + ++ N+T R++N N + SI+ W E + + + + +AA
Sbjct: 252 FALDVEPYRYSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA 311
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
LMYDAV++ A A+Q + + L C W+ G L+K DG+TGRIN +
Sbjct: 312 LMYDAVHVVAVAVQQ--SPQITVSSLQCNRHKPWRFGNRFMTLIKEAHWDGLTGRINFNR 369
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
G R F L+ + + + +GTW+ A GLN M + +K K N T ++++++
Sbjct: 370 TNGLRTDFDLDVISLKEEGLEKIGTWDPASGLN-------MTENQKGKTANVTDSLSNRS 422
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
+L EPY+M LYG Y VDL++ +A L F Y+ L + YG
Sbjct: 423 LVVSTIL--EEPYVMFKKSDKPLYGNDRFEGYCVDLLRELAAILGFGYELRLVEDGRYGA 480
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+ +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP P
Sbjct: 481 QDESSGQWNGMVRELMDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNP 540
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 541 GVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 575
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP + + E + F + +++ + +A+STR+V G
Sbjct: 569 FVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 628
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE GST FFK
Sbjct: 629 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGVVEDGSTMTFFK 685
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K + +S Y +M M S R SV VKS +EG+ERV+ YAF MEST IE+ ++NC+L
Sbjct: 685 KKTKISTYDKMWEFMSSRRHSVMVKSIEEGIERVLTSD--YAFLMESTTIEFVTQRNCNL 742
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSK YG+ P S + K + +L+ +G+ +MMK
Sbjct: 743 TQIGGLIDSKAYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 785
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y VDL++ +A L F Y+ L + YG + +G+WNG
Sbjct: 431 EPYVMFKKSDKPLYGNDRFEGYCVDLLRELAAILGFGYELRLVEDGRYGAQDESSGQWNG 490
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 491 MVRELMDH 498
>gi|395849078|ref|XP_003797163.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 1 [Otolemur garnettii]
Length = 968
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/635 (31%), Positives = 307/635 (48%), Gaps = 93/635 (14%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
++I GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++
Sbjct: 37 LRIGGIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRR 95
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C+ + G+AA+FGP + + ++S+C ++PH++ W + + +N+YP+
Sbjct: 96 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VDNKDLFYINLYPD 153
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
IS+ I ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 154 YTAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLP 206
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 207 SGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDL 262
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VK 290
+D + ++ N+T R++N NPH+ SI+ W E + R ET +
Sbjct: 263 FALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPP----RPETGLLDGMMT 318
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
EAALMYDAVY+ A A + + L C W+ G NL+K DG+TGRI
Sbjct: 319 TEAALMYDAVYMVAIASHRASQLT--VSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRI 376
Query: 351 NLDSQTGRRNSFSLEFV---------------EYVSDQWKVLGTWNTAFG---------- 385
+ G R F L+ + +++ WK + T T G
Sbjct: 377 TFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKVCTRTTTAGNLGVWWGMSL 436
Query: 386 ---------------------------LNHSRTVE-QMDKEK---KEKIENRTLTVTSKT 414
HS T+ Q +KEK KE +T
Sbjct: 437 EKLLSFQFCQTNSSPVASKGGCVSLAPFTHSSTLPLQREKEKLSSKEVGGKEKITCEVFG 496
Query: 415 FAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTYGT 468
F+ L + EPY+M LY GY +DL+K ++N L F Y L + YG
Sbjct: 497 FSYLVCIIXEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGA 556
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
N + G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 557 QNDK-GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 615
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 616 GVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 650
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 694 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 753
Query: 814 STRNFFK 820
ST FFK
Sbjct: 754 STMTFFK 760
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 760 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 817
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 818 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 860
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 659 FGFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTY 712
FGF+ L + EPY+M LYG Y +DL+K ++N L F Y L + Y
Sbjct: 495 FGFSYLVCIIXEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKY 554
Query: 713 GTLNPQTGKWNGLIGEL 729
G N + G+WNG++ EL
Sbjct: 555 GAQNDK-GEWNGMVKEL 570
>gi|351699632|gb|EHB02551.1| Glutamate receptor, ionotropic kainate 1 [Heterocephalus glaber]
Length = 902
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 285/581 (49%), Gaps = 80/581 (13%)
Query: 34 PDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE 93
P+ L +Q + +DS ++ C+ + G+AA+FGP + + ++S+C ++PH++
Sbjct: 2 PNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQ 61
Query: 94 AFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVL 153
W + + +N+YP+ IS+ I ++ +W T T++YE L+ LQ+++
Sbjct: 62 TRWKHPS--VDNKDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELI 119
Query: 154 ENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQA 213
+ + +I+ IRQLP D +PLLKE+K E +++ DCS + ILKQ
Sbjct: 120 KAPSRYNIKIK-------IRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 172
Query: 214 KEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIY 273
+ +M +Y +Y + ++ +D + ++ N+T R++N NPH+ SI+ W
Sbjct: 173 LFMGMMTEYYHYFFTT----LDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIERWSM 228
Query: 274 EENERGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSS 327
E + R ET + EAALMYDAVY+ A A + + L C
Sbjct: 229 ERLQAPP----RPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKP 282
Query: 328 WQHGLGIGNLMKSITI---------------------------------------DGMTG 348
W+ G NL+K T+ DG+TG
Sbjct: 283 WRLGPRFMNLIKEATLCLNGIPPAAHHENAAELTVHVTSTHCPPKAAELRNHARWDGLTG 342
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
RI + G R F L+ + + + +G WN+ GLN + + + + NRTL
Sbjct: 343 RITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDKTNNITDSLANRTL 402
Query: 409 TVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLER 462
VT+ EPY+M LYG Y +DL+K ++N L F Y L
Sbjct: 403 IVTT---------ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVP 453
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG N + G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRK
Sbjct: 454 DGKYGAQNDK-GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRK 512
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 513 PNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 553
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 597 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGTVRDG 656
Query: 814 STRNFFK 820
ST FFK
Sbjct: 657 STMTFFK 663
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + S VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 663 KKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 720
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 721 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 763
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 410 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDK-GEWNG 468
Query: 725 LIGEL 729
++ EL
Sbjct: 469 MVKEL 473
>gi|195145468|ref|XP_002013714.1| GL24289 [Drosophila persimilis]
gi|194102657|gb|EDW24700.1| GL24289 [Drosophila persimilis]
Length = 952
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 314/568 (55%), Gaps = 50/568 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
I+ E ++ F +A+ + N++ + + L + +E +S T+K +C + +
Sbjct: 34 IYENTEPDLEKIFHLAISKANEENEKMQ----LHGVAVAIEPGNSFETSKKLCRMLRQNL 89
Query: 66 AAIFGPQS-IENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
A+FGP + + R+ + S+C ++P ++ WD + +PT +N++P + +
Sbjct: 90 VAVFGPTTNLAGRHAM-SICDAKELPFLDTRWDFDAQ-LPT-----INLHPHPTTLGVAL 142
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYR 183
++ + W++FTI+YE+ + L ++++L+ P++T+R+ D + +YR
Sbjct: 143 KDMVLALGWESFTIVYESGEYLATVKELLQ-------MYGTAGPTITVRRYELDLNGNYR 195
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM-GDYQNYILSLTSYWINAHTVDFQ 242
+L+ I+N+ + +++ SM KQA++V L+ DY+ I +L + HT+D +
Sbjct: 196 NVLRRIRNADDFSLVVVGSMGTLPEFFKQAQQVGLVTSDYRYMIGNL-----DWHTMDVE 250
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYL 302
FQ NIT +R+++P N ++ + +YE E ++++ + AL+YD V L
Sbjct: 251 PFQHAGTNITGLRLVSPDNEQVQDVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQL 306
Query: 303 FAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
A + + R P PLSC + S+W G + N MKS+T++G+TG I D + G R F
Sbjct: 307 LAETYKHVNFR---PVPLSCGDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDF 362
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
LE +E + +G W+ G +R +E ++ +K+F + +
Sbjct: 363 QLEVIELAVSGMQKIGQWSGEDGFQANRPA------PAHSLEPDMRSLVNKSFVVVTAI- 415
Query: 423 QGEPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
EPY M ET E G+ ++LI ++ +L F+Y F L+ +N YG L+P+TG+
Sbjct: 416 -SEPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTFRLQPDNKYGGLDPKTGE 473
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
WNG++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+
Sbjct: 474 WNGMLREIIDNRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMS 533
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW+++ AY+GVS+ +F L R+S
Sbjct: 534 PFSGEVWLWLGLAYMGVSISMFVLGRLS 561
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI +V+DL+K G + YG
Sbjct: 605 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDVDDLSKNKGGVNYGAKNG 664
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 665 GSTFTFFK 672
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQ+M+ + + P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 672 KESNYPTYQKMYQFL-TDNPQYMTNSNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 728
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 729 TQVGALLDEKGYGIAM 744
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y F L+ +N YG L+P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTFRLQPDNKYGGLDPKTGEWN 475
Query: 724 GLIGEL 729
G++ E+
Sbjct: 476 GMLREI 481
>gi|198452074|ref|XP_002137419.1| GA26558, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131776|gb|EDY67977.1| GA26558, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 952
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 315/568 (55%), Gaps = 50/568 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
I+ E ++ F +A+ + N++ + ++ L + +E ++ T+K +C + +
Sbjct: 34 IYENTEPDLEKIFHLAISKANEENE----EMQLHGVAVAIEPGNAFETSKKLCRMLRQNL 89
Query: 66 AAIFGPQS-IENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
A+FGP + + R+ + S+C ++P ++ WD +PT +N++P ++ +
Sbjct: 90 VAVFGPTTNLAGRHAM-SICDAKELPFLDTRWDFEAQ-LPT-----INLHPHPTILGVAL 142
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYR 183
++ + W++FTI+YE+ + L ++++L+ P++T+R+ D + +YR
Sbjct: 143 KDMVLALGWESFTIVYESGEYLATVKELLQ-------MYGTAGPTITVRRYELDLNGNYR 195
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM-GDYQNYILSLTSYWINAHTVDFQ 242
+L+ I+N+ + +++ SM KQA++V L+ DY+ I +L + HT+D +
Sbjct: 196 NVLRRIRNADDFSLVVVGSMSTLPEFFKQAQQVGLVTSDYRYMIGNL-----DWHTMDVE 250
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYL 302
FQ NIT +R+++P N ++ + +YE E ++++ + AL+YD V L
Sbjct: 251 PFQHAGTNITGLRLVSPDNEQVQDVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQL 306
Query: 303 FAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
A + + R P PLSC + S+W G + N MKS+T++G+TG I D + G R F
Sbjct: 307 LAETYKHVNFR---PVPLSCGDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDF 362
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
LE +E + +G W+ G +R +E ++ +K+F + +
Sbjct: 363 QLEVIELAVSGMQKIGQWSGEDGFQANRPA------PAHSLEPDMRSLVNKSFVVVTAI- 415
Query: 423 QGEPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
EPY M ET E G+ ++LI ++ +L F+Y F L+ +N YG L+P+TG+
Sbjct: 416 -SEPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTFRLQPDNKYGGLDPKTGE 473
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
WNG++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+
Sbjct: 474 WNGMLREIIDNRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMS 533
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW+++ AY+GVS+ +F L R+S
Sbjct: 534 PFSGEVWLWLGLAYMGVSISMFVLGRLS 561
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI +V+DL+K G + YG
Sbjct: 605 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDVDDLSKNKGGVNYGAKNG 664
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 665 GSTFTFFK 672
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQ+M+ + + P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 672 KESNYPTYQKMYQFL-TDNPQYMTNSNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 728
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 729 TQVGALLDEKGYGIAM 744
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y F L+ +N YG L+P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTFRLQPDNKYGGLDPKTGEWN 475
Query: 724 GLIGEL 729
G++ E+
Sbjct: 476 GMLREI 481
>gi|344245335|gb|EGW01439.1| Glutamate receptor, ionotropic kainate 1 [Cricetulus griseus]
Length = 778
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 274/544 (50%), Gaps = 61/544 (11%)
Query: 34 PDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE 93
P+I L +Q + +DS ++ C+ + G+AA+FGP + + ++S+C ++PH++
Sbjct: 2 PNITLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQ 61
Query: 94 AFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVL 153
W + + +N+YP+ IS+ + ++ +W T T++YE L+ LQ+++
Sbjct: 62 TRWKHPS--VDNKDLFYINLYPDYAAISRAVLDLVLYYNWRTVTVVYEDSTGLIRLQELI 119
Query: 154 ENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQA 213
+ + +I+ IRQLP D +PLLKE+K E +++ DCS + ILKQ
Sbjct: 120 KAPSRYNIKIK-------IRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQ- 171
Query: 214 KEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIY 273
+ +D + ++ N+T R++N NPH+ SI+ W
Sbjct: 172 ---------------------DLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSM 210
Query: 274 EENERGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSS 327
E + R ET + EAALMYDAVY+ A A + + L C
Sbjct: 211 ERLQAPP----RPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTV--SSLQCHRHKP 264
Query: 328 WQHGLGIGNLMK--SITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFG 385
W G NL+K S DG+TGRI + G R F L+ + + + +G WN+ G
Sbjct: 265 WHLGPRFMNLIKEASARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSG 324
Query: 386 LNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------ 439
LN + + + NRTL VT+ EPY+M L+G
Sbjct: 325 LNMTDGNRDRSNNITDSLANRTLIVTT---------ILEEPYVMYRKSDKPLHGNDRFEG 375
Query: 440 YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITS 499
Y +DL+K ++N L F Y L + YG + + G+WNG++ EL + RADLA+ LTIT
Sbjct: 376 YCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNGMVKELIDHRADLAVAPLTITY 434
Query: 500 ERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFL 559
R +DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +
Sbjct: 435 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 494
Query: 560 ARIS 563
AR +
Sbjct: 495 ARFT 498
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 542 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 601
Query: 814 STRNFFK 820
ST FFK
Sbjct: 602 STMTFFK 608
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS + + K S +S Y++M + M S S VK+N EG++RV+ YA MEST
Sbjct: 598 VKDGSTMTF-FKKSKISTYEKMWAFMSSREQSALVKNNDEGIQRVLTTD--YALLMESTS 654
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
IEY ++NC+L Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 655 IEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 708
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L+G Y +DL+K ++N L F Y L + YG + + G+WNG
Sbjct: 355 EPYVMYRKSDKPLHGNDRFEGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDDK-GEWNG 413
Query: 725 LIGEL 729
++ EL
Sbjct: 414 MVKEL 418
>gi|390178001|ref|XP_003736544.1| GA26558, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859288|gb|EIM52617.1| GA26558, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 788
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 315/568 (55%), Gaps = 50/568 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
I+ E ++ F +A+ + N++ + ++ L + +E ++ T+K +C + +
Sbjct: 34 IYENTEPDLEKIFHLAISKANEENE----EMQLHGVAVAIEPGNAFETSKKLCRMLRQNL 89
Query: 66 AAIFGPQS-IENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
A+FGP + + R+ + S+C ++P ++ WD +PT +N++P ++ +
Sbjct: 90 VAVFGPTTNLAGRHAM-SICDAKELPFLDTRWDFEAQ-LPT-----INLHPHPTILGVAL 142
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYR 183
++ + W++FTI+YE+ + L ++++L+ P++T+R+ D + +YR
Sbjct: 143 KDMVLALGWESFTIVYESGEYLATVKELLQMYGT-------AGPTITVRRYELDLNGNYR 195
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM-GDYQNYILSLTSYWINAHTVDFQ 242
+L+ I+N+ + +++ SM KQA++V L+ DY+ I +L + HT+D +
Sbjct: 196 NVLRRIRNADDFSLVVVGSMSTLPEFFKQAQQVGLVTSDYRYMIGNL-----DWHTMDVE 250
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYL 302
FQ NIT +R+++P N ++ + +YE E ++++ + AL+YD V L
Sbjct: 251 PFQHAGTNITGLRLVSPDNEQVQDVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQL 306
Query: 303 FAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
A + + R P PLSC + S+W G + N MKS+T++G+TG I D + G R F
Sbjct: 307 LAETYKHVNFR---PVPLSCGDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDF 362
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
LE +E + +G W+ G +R +E ++ +K+F + +
Sbjct: 363 QLEVIELAVSGMQKIGQWSGEDGFQANRPA------PAHSLEPDMRSLVNKSFVVVTAI- 415
Query: 423 QGEPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
EPY M ET E G+ ++LI ++ +L F+Y F L+ +N YG L+P+TG+
Sbjct: 416 -SEPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTFRLQPDNKYGGLDPKTGE 473
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
WNG++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+
Sbjct: 474 WNGMLREIIDNRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMS 533
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW+++ AY+GVS+ +F L R+S
Sbjct: 534 PFSGEVWLWLGLAYMGVSISMFVLGRLS 561
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI +V+DL+K G + YG
Sbjct: 605 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDVDDLSKNKGGVNYGAKNG 664
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 665 GSTFTFFK 672
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQ+M+ + + P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 672 KESNYPTYQKMYQFL-TDNPQYMTNSNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 728
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 729 TQVGALLDEKGYGIAM 744
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y F L+ +N YG L+P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTFRLQPDNKYGGLDPKTGEWN 475
Query: 724 GLIGEL 729
G++ E+
Sbjct: 476 GMLREI 481
>gi|195399542|ref|XP_002058378.1| GJ14381 [Drosophila virilis]
gi|194141938|gb|EDW58346.1| GJ14381 [Drosophila virilis]
Length = 967
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 305/562 (54%), Gaps = 47/562 (8%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P+ E++ F +A+ + N++ + L L + +E ++ T+K +C + + A+
Sbjct: 50 PDLEKI---FHLAIGKANEENEELK----LHGVAVAIEPSNAFETSKKLCKMLRQNLVAV 102
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP + S+C ++P ++ WD +PT +N++P + + ++
Sbjct: 103 FGPTTNRAARHALSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPAQLGAALKDLV 156
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLK 187
+ W++FTIIYE+ + LV + ++L+ P++T+R+ D + +YR +L+
Sbjct: 157 TALGWESFTIIYESGEYLVTVNELLQ-------MYGTAGPTITLRRYDLDLNGNYRNVLR 209
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+NS + ++ S++ KQA++ L+ YI+ + HT+D + +Q
Sbjct: 210 RIRNSEDDSFVVVGSIETLPEFFKQAQQTGLLTSDYRYIIGNLDW----HTMDLEPYQHA 265
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
+NIT +R ++P N + + +YE E ++++ + AL+YD + L A
Sbjct: 266 DSNITGLRFVSPENGQVLEVAKA-LYESEEPFQNVSC---PLTNSMALIYDGIQLLAETY 321
Query: 308 QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + R P PLSC + S+W G + N MKS++++G+TG I+ D + G R F LE +
Sbjct: 322 KHVNYR---PMPLSCGDDSAWDKGYTLVNYMKSLSLNGLTGPIHFDYE-GLRTDFQLEVI 377
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E + +G W+T G +R +E ++ +K+F + + EPY
Sbjct: 378 ELGVSGMQQIGQWSTEAGFEMNRPA------PAHTLEPDMRSLMNKSFVVVTAI--SEPY 429
Query: 428 MM------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIG 481
M K + G+ ++LI ++ +L F+Y F L+ +N YG ++P+TG+WNG++
Sbjct: 430 GMLKETAEKLEGNAQFEGFGIELIDELSKKLGFSYTFYLQPDNKYGGIDPKTGEWNGMLR 489
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
E+ + RAD+ I DLT+TSER + VDFT+PFM LGI+IL+RKP K+ P LFSF+ P S +V
Sbjct: 490 EIIDNRADMGITDLTMTSERESGVDFTIPFMNLGIAILFRKPMKEPPKLFSFMSPFSGEV 549
Query: 542 WVYMATAYLGVSLLLFFLARIS 563
W+++ AYLGVS+ +F L R+S
Sbjct: 550 WLWLGLAYLGVSISMFVLGRMS 571
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI++ EDL++ G + YG
Sbjct: 615 KAFSTRAVASSWWFFTLILVSSYTANLAAFLTVESLVTPIEDAEDLSENKGGVNYGAKNG 674
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 675 GSTFTFFK 682
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K++ YQ+M+ M+ + P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 682 KDAKFPTYQKMYEFMKDN-PQYMTNSNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 738
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 739 TQVGALLDEKGYGIAM 754
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 671 EPYMM------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M K + G+ ++LI ++ +L F+Y F L+ +N YG ++P+TG+WNG
Sbjct: 427 EPYGMLKETAEKLEGNAQFEGFGIELIDELSKKLGFSYTFYLQPDNKYGGIDPKTGEWNG 486
Query: 725 LIGEL 729
++ E+
Sbjct: 487 MLREI 491
>gi|195449609|ref|XP_002072146.1| GK22476 [Drosophila willistoni]
gi|194168231|gb|EDW83132.1| GK22476 [Drosophila willistoni]
Length = 888
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 306/559 (54%), Gaps = 46/559 (8%)
Query: 13 EVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQ 72
E+ F +A+ + N+D + ++ + +E +S T+K +C + + A+FGP
Sbjct: 28 EMEKIFHLAIAKANEDNE----EMNFHGVTMAIEPGNSFETSKKLCKMLKQNLVAVFGPT 83
Query: 73 SIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMD 132
+ S+C ++P ++ WD + +PT +N++P ++ + I+ M
Sbjct: 84 TNLAARHAMSICDAKELPFLDTRWDFDAQ-LPT-----INLHPHPSQLALTLKDIVMSMG 137
Query: 133 WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKEIKN 191
W++FTIIYE+ + L + ++L+ P++T+R+ + + +YR +L+ I+N
Sbjct: 138 WESFTIIYESGEYLATVSELLQMYGT-------AGPTITVRRYELNLNGNYRNVLRRIRN 190
Query: 192 SSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANI 251
+ + ++ SM+ KQA++V L+ YI+ ++ HT+D + +Q NI
Sbjct: 191 AEDFSFVVVGSMETLPEFFKQAQQVGLLTSDYRYIVGN----LDWHTMDVEPYQHAGTNI 246
Query: 252 TTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG 311
T +R+++P + ++ + +YE +E ++++ + AL+YD V L A + +
Sbjct: 247 TALRLVSPEDELVQEVAKA-LYESDEPFQNVSC---PLTNSMALVYDGVQLLAETYKHVD 302
Query: 312 ERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVS 371
R P PLSC + S+W G + N MKS+T++G+TG I D + G R F L+ +E
Sbjct: 303 FR---PVPLSCGDDSAWDKGFTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFQLDVIELTV 358
Query: 372 DQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN 431
+ +G W++ G +R +E ++ +K+F + + EPY M
Sbjct: 359 SGMQQIGQWSSEGGFEPNR------PPPAHSLEPDIRSLVNKSFVVITAI--SEPYGMLK 410
Query: 432 PETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 484
ET E G+ ++LI ++ +L FTY F L+ +N YG ++P+TG+WNG++ E+
Sbjct: 411 -ETAEKLEGNDQFEGFGIELIDELSKKLGFTYTFRLQVDNKYGGIDPKTGEWNGMLREII 469
Query: 485 EQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVY 544
+ RADLAI DLT+TSER + VDFT+PFM LGI+IL+RKP K+ P LFSF+ P S +VW++
Sbjct: 470 DNRADLAITDLTMTSERESGVDFTIPFMNLGIAILFRKPMKEPPKLFSFMSPFSGEVWIF 529
Query: 545 MATAYLGVSLLLFFLARIS 563
+ AY VS+ +F L R+S
Sbjct: 530 LGLAYTSVSITMFVLGRLS 548
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL++ G +KYG
Sbjct: 592 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSENKGGVKYGAKNG 651
Query: 813 GSTRNFFK 820
GST FF+
Sbjct: 652 GSTFTFFR 659
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 13/91 (14%)
Query: 568 LRYSAKN----------SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
++Y AKN S YQ+M+ M+ + P +N+EGV+ V E YAF M
Sbjct: 644 VKYGAKNGGSTFTFFRESTYPTYQKMYEFMKEN-PQYMTNTNQEGVDAV--ENTNYAFLM 700
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
EST IEY E+ C L QVG LLD KGYGIAM
Sbjct: 701 ESTTIEYITERRCTLTQVGSLLDEKGYGIAM 731
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L FTY F L+ +N YG ++P+TG+WN
Sbjct: 404 EPYGMLK-ETAEKLEGNDQFEGFGIELIDELSKKLGFTYTFRLQVDNKYGGIDPKTGEWN 462
Query: 724 GLIGEL 729
G++ E+
Sbjct: 463 GMLREI 468
>gi|195054030|ref|XP_001993929.1| GH18377 [Drosophila grimshawi]
gi|193895799|gb|EDV94665.1| GH18377 [Drosophila grimshawi]
Length = 959
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 305/562 (54%), Gaps = 47/562 (8%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P+ E++ F +A+ + N++ + L L + +E ++ +K +C + + A+
Sbjct: 44 PDLEKI---FHLAIAKANEENEELK----LHGVAVAIEPNNAFEASKKLCKMLRQNLVAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP + S+C ++P ++ WD + +PT +N++P + + ++
Sbjct: 97 FGPSTNLPARHAMSICDAKELPFMDTRWDFSAQ-LPT-----INLHPHPVQLGVALKDLV 150
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLK 187
+ W++FTIIYE+ + LV + ++L+ P +T+R+ D + +YR +L+
Sbjct: 151 TALGWESFTIIYESGEYLVTVNELLQMYGT-------AGPPITLRRYDLDLNGNYRNVLR 203
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+N+ ++ ++ S + + KQ ++V L+ YI+ + HT+D + +Q
Sbjct: 204 RIRNAEDNSFVVVGSTETLPELFKQVQQVGLLTSDYRYIIGNLDW----HTMDLEAYQHA 259
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
ANIT +R+++P I+ + +YE E ++++ + AL+YD + L A
Sbjct: 260 DANITGLRVVSPEQEQIQEVAKA-LYESEEPFQNVSC---PLTNSMALIYDGIQLLAETY 315
Query: 308 QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + R P PLSC + SSW G + N MKS+T++G+TG I D + G R F LE +
Sbjct: 316 KHVNFR---PMPLSCGDDSSWDKGYTLVNYMKSLTLNGLTGPIQFDYE-GLRTDFQLEVI 371
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E + +G W+T G +R IE ++ +K+F + + EPY
Sbjct: 372 ELGVSGMQQIGQWSTDGGFEMNRPA------APHTIEPDMRSLMNKSFVVVTAI--SEPY 423
Query: 428 MM------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIG 481
M K + G+ ++LI +A +L F+Y F L+ +N YG L+P+TG+WNG++
Sbjct: 424 GMLKETSEKLEGNAQFEGFGIELIDELAKKLGFSYTFYLQPDNKYGGLDPKTGEWNGMLR 483
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
E+ + RAD+ I DLT+TSER + VDFT+PFM LGI+IL+RKP K+ P LFSF+ P S +V
Sbjct: 484 EIIDNRADMGITDLTMTSERESGVDFTIPFMNLGIAILFRKPMKEPPKLFSFMSPFSGEV 543
Query: 542 WVYMATAYLGVSLLLFFLARIS 563
W+++ AY+GVS+ +F L R+S
Sbjct: 544 WLWLGLAYMGVSISMFILGRLS 565
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI++ EDL++ G + YG
Sbjct: 609 KAFSTRAVASSWWFFTLILVSSYTANLAAFLTVESLVTPIEDAEDLSENKGGVNYGAKNG 668
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 669 GSTFTFFK 676
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K++ YQ+M+ M+ + P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 676 KDAKYPTYQKMYEFMKDN-PQYMTDSNQEGVDRV--ENTNYAFLMESTTIEYITERRCTL 732
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 733 TQVGALLDEKGYGIAM 748
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 671 EPYMM------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M K + G+ ++LI +A +L F+Y F L+ +N YG L+P+TG+WNG
Sbjct: 421 EPYGMLKETSEKLEGNAQFEGFGIELIDELAKKLGFSYTFYLQPDNKYGGLDPKTGEWNG 480
Query: 725 LIGEL 729
++ E+
Sbjct: 481 MLREI 485
>gi|194899634|ref|XP_001979364.1| GG24232 [Drosophila erecta]
gi|190651067|gb|EDV48322.1| GG24232 [Drosophila erecta]
Length = 960
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 304/561 (54%), Gaps = 46/561 (8%)
Query: 11 EEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFG 70
E ++ F +A+ + N++ + D+ L + +E +S T+K +C + + A+FG
Sbjct: 44 EPDLEKIFHLAISKANEENE----DLQLHGVSVSIEPGNSFETSKKLCKMLKQNLVAVFG 99
Query: 71 PQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIND 130
P S S+C ++P ++ WD +PT +N++P + + ++
Sbjct: 100 PTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALRDMVVA 153
Query: 131 MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKEI 189
+ W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR +L+ I
Sbjct: 154 LGWESFTIIYESGEYLATVRELLQM-------YGTAGPTVTVRRYELDLNGNYRNVLRRI 206
Query: 190 KNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYA 249
+N+ + ++ SM + KQA++V L+ YI+ + HT+D + +Q
Sbjct: 207 RNADDFSFVVVGSMATLPELFKQAQQVGLVTSDYRYIIGNLDW----HTMDLEPYQHAGT 262
Query: 250 NITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
NIT +R+++P N ++ + +YE E ++++ + AL+YD V L A +
Sbjct: 263 NITGLRVVSPDNEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLAETYKH 318
Query: 310 LGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY 369
+ R P LSC + S+W G + N MKS+T++G+TG I D + G R F LE +E
Sbjct: 319 VNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFELEVIEL 374
Query: 370 VSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM 429
+ +G W+ G +R +E ++ +K+F + + EPY M
Sbjct: 375 AVSGMQKIGQWSGEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--SEPYGM 426
Query: 430 KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 482
ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WNG++ E
Sbjct: 427 LK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLRE 485
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P S +VW
Sbjct: 486 IIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGEVW 545
Query: 543 VYMATAYLGVSLLLFFLARIS 563
+++ AY+GVS+ +F L R+S
Sbjct: 546 LWLGLAYMGVSISMFVLGRLS 566
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 677 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 733
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 734 TQVGALLDEKGYGIAM 749
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 610 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 669
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 670 GATFNFFK 677
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 724 GLIGEL 729
G++ E+
Sbjct: 481 GMLREI 486
>gi|432896634|ref|XP_004076357.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Oryzias
latipes]
Length = 842
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 287/574 (50%), Gaps = 53/574 (9%)
Query: 1 MKIVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL 56
M + GIF E E+ + AF+ AV IN++ K L P+ L +Q + +D ++
Sbjct: 1 MLMGGIFETRESELVSMDELAFKFAVNNINRN-KTLMPNSTLTYDIQRINIFDGFEASRR 59
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ + G+ A+FGP + + ++S+C ++PH++ W + +N+YPE
Sbjct: 60 VCDQLALGVVAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS--VNNKDTFFINLYPE 117
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
I++ I ++ W T+IYE L+ +Q++++ + +I+ IRQL
Sbjct: 118 YTAIARAILDVVTFFKWKKLTVIYEDSTGLMRMQELIKAPAKLNLKIK-------IRQLT 170
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
P D RPLLKE+K E I+ DCS +L Q + +M +Y ++ + ++
Sbjct: 171 PGNQDARPLLKELKKDKEFFIIFDCSYRMASELLMQLSSMGMMTEYYHFFFTT----LDL 226
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV-KIEAAL 295
+D + ++ N+T +R++N +P + S M+ W + + + E V +AAL
Sbjct: 227 FALDLEPYRYSGVNMTGLRLLNFDDPLVASTMSKWAMDRMQGPKQDKGLIEGVMTTDAAL 286
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
MYDAVY+ A A Q + + L C W+ G NL K +G+TGRI L
Sbjct: 287 MYDAVYMVAIAAQRATQMTV--SSLQCHRHKPWRFGPRFMNLFKEAQWNGLTGRIVLSKT 344
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
G R F L+ + D + +N++ N+ L KTF
Sbjct: 345 NGLRKDFDLDVITLQEDGTAKILFYNSS---------------------NKFL-FCQKTF 382
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ Q PY+M EL G Y +DL+K ++N L FTY+ L + YG
Sbjct: 383 F---LCLQENPYVMVRKSDKELVGNDRYEGYCMDLLKELSNILGFTYEVRLVGDGKYGAQ 439
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
N + G+WNG++ EL E ADLA+ LTIT R +DF+ PFMTLGISILYRKP P
Sbjct: 440 NDK-GEWNGMVRELIEHVADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 498
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLS D+W+Y+ A GVS +LF +AR +
Sbjct: 499 VFSFLNPLSPDIWMYVLLACTGVSCVLFVIARFT 532
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK RI+YG V G
Sbjct: 576 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMDAPIDSADDLAKQSRIEYGAVRDG 635
Query: 814 STRNFFK 820
ST FFK
Sbjct: 636 STMTFFK 642
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 562 ISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
++ SR+ Y A K S +S Y++M + M S + + VK+NKEG+ RV+
Sbjct: 621 LAKQSRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKNNKEGITRVLTTD- 679
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQG 670
YA MEST IEY ++NC+L Q+GGL+DSKGYG+ P S + K + +L+ +G
Sbjct: 680 -YAMLMESTSIEYISQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EG 736
Query: 671 EPYMMK 676
+ +MMK
Sbjct: 737 KLHMMK 742
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 656 KFSFGFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 709
KF F + Q PY+M EL G Y +DL+K ++N L FTY+ L +
Sbjct: 374 KFLFCQKTFFLCLQENPYVMVRKSDKELVGNDRYEGYCMDLLKELSNILGFTYEVRLVGD 433
Query: 710 NTYGTLNPQTGKWNGLIGELQEQV 733
YG N + G+WNG++ EL E V
Sbjct: 434 GKYGAQNDK-GEWNGMVRELIEHV 456
>gi|195498355|ref|XP_002096487.1| GE25697 [Drosophila yakuba]
gi|194182588|gb|EDW96199.1| GE25697 [Drosophila yakuba]
Length = 901
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/566 (30%), Positives = 306/566 (54%), Gaps = 46/566 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
+F E ++ F +A+ + N++ + D+ L + +E +S T+K +C + +
Sbjct: 34 VFENTEPDLEKIFHLAISKANEENE----DLELHGVSVSIEPGNSFETSKKLCKMLRQNL 89
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
A+FGP S S+C ++P ++ WD +PT +N++P + +
Sbjct: 90 VAVFGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALR 143
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRP 184
++ + W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR
Sbjct: 144 DMVVALGWESFTIIYESGEYLATVRELLQM-------YGTAGPTVTVRRYELDLNGNYRN 196
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+L+ I+N+ + ++ SM KQA++V L+ YI+ + HT+D + +
Sbjct: 197 VLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDW----HTMDLEPY 252
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
Q NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 253 QHAGTNITGLRVVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLA 308
Query: 305 AALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F L
Sbjct: 309 ETYKHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFEL 364
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
E +E + +G W++ G +R +E ++ +K+F + +
Sbjct: 365 EVIELGVSGMQKIGQWSSEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--S 416
Query: 425 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 475
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P
Sbjct: 476 GMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPF 535
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S +VW+++ AY+GVS+ +F L R+S
Sbjct: 536 SGEVWLWLGLAYMGVSISMFVLGRLS 561
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 672 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 728
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 729 TQVGALLDEKGYGIAM 744
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 605 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 664
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 665 GATFNFFK 672
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 475
Query: 724 GLIGEL 729
G++ E+
Sbjct: 476 GMLREI 481
>gi|195481417|ref|XP_002086719.1| GE11157 [Drosophila yakuba]
gi|194186509|gb|EDX00121.1| GE11157 [Drosophila yakuba]
Length = 950
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 306/566 (54%), Gaps = 46/566 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
++ E ++ F +A+ + N++ + D+ L + +E +S T+K +C + +
Sbjct: 34 VYENTEPDLEKIFHLAISKANEENE----DLELHGVSVSIEPGNSFETSKKLCKMLRQNL 89
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
A+FGP S S+C ++P ++ WD +PT +N++P + +
Sbjct: 90 VAVFGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALR 143
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRP 184
++ + W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR
Sbjct: 144 DMVVALGWESFTIIYESGEYLATVRELLQM-------YGTAGPTVTVRRYELDLNGNYRN 196
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+L+ I+N+ + ++ SM KQA++V L+ YI+ + HT+D + +
Sbjct: 197 VLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDW----HTMDLEPY 252
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
Q NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 253 QHAGTNITGLRVVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLA 308
Query: 305 AALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F L
Sbjct: 309 ETYKHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFEL 364
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
E +E + +G W++ G +R +E ++ +K+F + +
Sbjct: 365 EVIELGVSGMQKIGQWSSEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--S 416
Query: 425 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 475
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P
Sbjct: 476 GMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPF 535
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S +VW+++ AY+GVS+ +F L R+S
Sbjct: 536 SGEVWLWLGLAYMGVSISMFVLGRLS 561
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 672 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 728
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 729 TQVGALLDEKGYGIAM 744
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 605 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 664
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 665 GATFNFFK 672
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 417 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 475
Query: 724 GLIGEL 729
G++ E+
Sbjct: 476 GMLREI 481
>gi|194742814|ref|XP_001953895.1| GF17996 [Drosophila ananassae]
gi|190626932|gb|EDV42456.1| GF17996 [Drosophila ananassae]
Length = 968
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 301/566 (53%), Gaps = 46/566 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
I+ E ++ F +A+ + N++ + L + +E +S T+K +C + +
Sbjct: 38 IYESTEPDLEKIFHLAISKANEENEELQ----FHGVSAAIEPGNSFETSKKLCKMLRQNL 93
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
A+FGP + S+C ++P ++ WD +PT +N++P + +
Sbjct: 94 VAVFGPTTNLAARHAMSICDAKELPFLDTRWDFQAQ-LPT-----INLHPHPTSLGLALR 147
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRP 184
++ + W++FTIIYE+ + L ++ +++ P+VT+R+ D + +YR
Sbjct: 148 DMVAALGWESFTIIYESGEYLATVRDLIQM-------YGTAGPTVTVRRYELDLNGNYRN 200
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+L+ ++NS++ ++ SM KQA++V L+ YI+ + HT+D + +
Sbjct: 201 VLRRVRNSADFSFVVVGSMATLPEFFKQAQQVGLVTSEYRYIIGNLDW----HTMDLEPY 256
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
Q NIT +R+++P N + + +YE E ++++ + AL+YD V L A
Sbjct: 257 QHAGTNITGLRLVSPENEQVLEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLA 312
Query: 305 AALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F L
Sbjct: 313 ETYKHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFEL 368
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
E VE + +G W+ G +R +E ++ +K+F + +
Sbjct: 369 EVVELAVSGMQKIGQWSGEDGFQQNRPA------PAHSLEPDMRSLVNKSFVVVTAI--S 420
Query: 425 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
EPY M ET E G+ +D+I ++ +L F+Y F L+ +N YG ++P+TG+WN
Sbjct: 421 EPYGMLK-ETSEKLEGNDQFEGFGIDVIDELSKKLGFSYTFRLQPDNKYGGIDPKTGEWN 479
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P
Sbjct: 480 GMLREIMDNRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPF 539
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S +VW+++ AY+ VS+ +F L R+S
Sbjct: 540 SGEVWLWLGLAYMAVSISMFVLGRLS 565
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 676 KESNYPTYQRMYEFMRDN-PQFMTMSNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 732
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 733 TQVGPLLDEKGYGIAM 748
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI N +DL+K G + YG
Sbjct: 609 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPIDNADDLSKNKGGVNYGAKVG 668
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 669 GSTFTFFK 676
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ +D+I ++ +L F+Y F L+ +N YG ++P+TG+WN
Sbjct: 421 EPYGMLK-ETSEKLEGNDQFEGFGIDVIDELSKKLGFSYTFRLQPDNKYGGIDPKTGEWN 479
Query: 724 GLIGELQE 731
G++ E+ +
Sbjct: 480 GMLREIMD 487
>gi|322797368|gb|EFZ19480.1| hypothetical protein SINV_09877 [Solenopsis invicta]
Length = 678
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 310/573 (54%), Gaps = 47/573 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKD----FKALPPDIILEPIVQHVENYDSLHTAKL 56
++IVG+F +E++ T FE++V +N+D K +L V D T+K
Sbjct: 26 VQIVGLFD-QDEDIETMFEMSVHAVNQDRFNKSKKFSTTYLLA--VAEAITMDLHETSKT 82
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C GI +FGPQ ++S+C ++P++ D ++ F G++ +N+YP
Sbjct: 83 VCELLDAGIVGVFGPQEKVTAEYVQSICNAIEVPYISVRQDLDQSF-QARGLN-LNLYPH 140
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+ +S+ + ++ + W +F I+YE +D+L+ ++ +++ R
Sbjct: 141 VNSLSRIYNQLVIEFKWKSFAILYENNDSLIRMRLLMKRWD--------SRGYSAYMYYL 192
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ +YR ++EIK S+ +I++DCS + +L QA++V ++ + Y + +TS ++
Sbjct: 193 GNGPNYRRSMQEIKTSNIENIIIDCSSEILSEVLMQAQQVGILS--EKYKVIVTS--LDL 248
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
T+D + +Q N T VR+I+P +P +R + + N+ + +++E ALM
Sbjct: 249 QTLDLEPYQYSGVNFTGVRLIDPEDPIVRETFDRHKWNLNDSSQ--------LRVEPALM 300
Query: 297 YDAVYLFAAALQSLGER-KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
YDAV LFA A + L + K L C++ S W+HGL + N M+S G+TG + D +
Sbjct: 301 YDAVQLFAKAFKQLKDAIKGDVKALKCDDSSRWEHGLSLSNFMRSTETRGLTGLVKFD-R 359
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
G R++ L+ + D K +G WN++ G +++ + + K++N+ +++ +KTF
Sbjct: 360 DGFRSNIDLDIIHLTEDGLKKIGQWNSSAG----ESIDWLPENTLNKLDNK-MSIQNKTF 414
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
L + PY M+ T +L G +++D+I+ I+ L F Y F +E G
Sbjct: 415 IVL-ITTGTPPYGMEKESTIQLSGNDRYEGFTIDIIQEISEILGFNYTFQVES----GAG 469
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ GKWNG++G++ ADLAI DLTIT ER DF+ P + LGISIL++KP K P
Sbjct: 470 KKEGGKWNGMLGKIMADEADLAITDLTITKERVEDFDFSNPILNLGISILFKKPTKAPPS 529
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
LFSFL P S DVW+Y+ AY+ VS+L+F + R+
Sbjct: 530 LFSFLLPFSTDVWIYLIGAYVIVSVLMFIIGRL 562
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 713 GTLNPQTGKWNG---LIGELQEQVDTFIL-----FFIYSILFFIYTFVNEAVSTRLVAGM 764
G L P +WN I E +E + F L F I SI+ +STR++A
Sbjct: 560 GRLCP--AEWNNPYPCIEEAEELENQFTLKNAFWFSIGSIMQQGSEIAPIGISTRMIASC 617
Query: 765 WWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFKV 821
WWFFTLIM+SSYTANLAAFLT + P NVE+LA + IKYG G+T FF+V
Sbjct: 618 WWFFTLIMVSSYTANLAAFLTVETIVRPFNNVEELANSKNIKYGAKTPGATLRFFEV 674
>gi|195113727|ref|XP_002001419.1| GI10783 [Drosophila mojavensis]
gi|193918013|gb|EDW16880.1| GI10783 [Drosophila mojavensis]
Length = 969
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 303/565 (53%), Gaps = 44/565 (7%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
IF ++ F +A+ + N+ + L L + +E ++ +K +C + +
Sbjct: 45 IFENTNPDLEKIFHLAIEKANEQNEELN----LHGVPVSIEPNNAFEASKKLCKMLRQHL 100
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
A+FGP + S+C ++P ++ WD +PT +N++P + I
Sbjct: 101 VAVFGPSTNMAARHALSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPAQVGVAIK 154
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRP 184
++ + W++FTIIYE+ + L + ++L K P++T+R+ D + +YR
Sbjct: 155 DLVTALGWESFTIIYESGEYLATVNELL-------KMYGTTGPTITLRRYDLDLNGNYRN 207
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+L+ I+N+ + ++ S+D + KQ ++V L+ YI+ + T+D + +
Sbjct: 208 VLRRIRNAEDKSFVVVGSLDTLPELFKQVQQVGLLTSSYRYIIGNLDW----QTMDLEPY 263
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
Q +NIT +R+++P N + + +YE E ++++ + AL+YD + L A
Sbjct: 264 QHADSNITGLRLVSPANEQVLEVAKA-LYESEEPFQNVSC---PLTNSMALIYDGIQLLA 319
Query: 305 AALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
+ + R P LSC + S+W G + N MKS++++G+TG+I+ D + G R F L
Sbjct: 320 ETYRHVNFR---PITLSCGDDSAWDKGYTLVNYMKSLSLNGLTGQIHFDYE-GLRTDFQL 375
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
E +E + +G W++A G +R +E ++ +K+F + +
Sbjct: 376 EVIELGVSGMQKIGQWSSADGFEMNRPA------PAHTLEPDMRSLMNKSFVVVTAI--S 427
Query: 425 EPYMM------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
EPY M K + G+ ++LI ++ +L FTY F L+ +N YG ++P+TG+WNG
Sbjct: 428 EPYGMLKETADKMEGNAQFEGFGIELIDELSKKLGFTYTFYLQPDNKYGGIDPKTGEWNG 487
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ + RAD+ I DLT+TSER + VDFT+PFM LGI+IL+RKP K+ P LFSF+ P S
Sbjct: 488 MLREIIDHRADMGITDLTMTSERESGVDFTIPFMNLGIAILFRKPMKEPPKLFSFMSPFS 547
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW+++ AY+GVS+ +F L R+S
Sbjct: 548 GEVWLWLGLAYMGVSISMFVLGRMS 572
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI++ EDL++ G + YG
Sbjct: 616 KAFSTRAVASSWWFFTLILVSSYTANLAAFLTVESLVTPIEDAEDLSENKGGVNYGAKNG 675
Query: 813 GSTRNFFK 820
GST FFK
Sbjct: 676 GSTFTFFK 683
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K++ YQ+M+ M+ P SN+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 683 KDAKYPTYQKMYEFMKD-HPQYMTNSNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 739
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 740 TQVGALLDEKGYGIAM 755
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 671 EPYMM------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M K + G+ ++LI ++ +L FTY F L+ +N YG ++P+TG+WNG
Sbjct: 428 EPYGMLKETADKMEGNAQFEGFGIELIDELSKKLGFTYTFYLQPDNKYGGIDPKTGEWNG 487
Query: 725 LIGEL 729
++ E+
Sbjct: 488 MLREI 492
>gi|442620194|ref|NP_001262788.1| CG5621, isoform C [Drosophila melanogaster]
gi|440217691|gb|AGB96168.1| CG5621, isoform C [Drosophila melanogaster]
Length = 907
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 306/563 (54%), Gaps = 49/563 (8%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P+ E++ F +A+ + N++ + D+ L + +E +S T+K +C + + A+
Sbjct: 45 PDLEKI---FHLAISKANEENE----DLQLHGVSVSIEPGNSFETSKKLCKMLRQNLVAV 97
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP S S+C ++P ++ WD +PT +N++P + + ++
Sbjct: 98 FGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALRDMV 151
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLK 187
+ W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR +L+
Sbjct: 152 VALGWESFTIIYESGEYLPTVRELLQM-------YGTAGPTVTVRRYELDLNGNYRNVLR 204
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+N+ + ++ SM KQA++V L+ YI+ ++ HT+D + +Q
Sbjct: 205 RIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGN----LDWHTMDLEPYQHA 260
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 261 GTNITGLRLVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLAETY 316
Query: 308 QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F LE +
Sbjct: 317 KHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFKLEVI 372
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E + +G W+ G +R +E ++ +K+F + + EPY
Sbjct: 373 ELAVSGMQKIGQWSGEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--SEPY 424
Query: 428 MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WNG++
Sbjct: 425 GMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGML 483
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P S +
Sbjct: 484 REIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGE 543
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
VW+++ AY+GVS+ +F L R+S
Sbjct: 544 VWLWLGLAYMGVSISMFVLGRLS 566
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 677 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 733
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 734 TQVGALLDEKGYGIAM 749
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 610 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 669
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 670 GATFNFFK 677
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 724 GLIGEL 729
G++ E+
Sbjct: 481 GMLREI 486
>gi|195569311|ref|XP_002102654.1| GD19386 [Drosophila simulans]
gi|194198581|gb|EDX12157.1| GD19386 [Drosophila simulans]
Length = 823
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 306/563 (54%), Gaps = 49/563 (8%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P+ E++ F +A+ + N++ + D+ L + +E +S T+K +C + + A+
Sbjct: 45 PDLEKI---FHLAISKANEENE----DLQLHGVSVSIEPGNSFETSKKLCKMLRQNLVAV 97
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP S S+C ++P ++ WD +PT +N++P + + ++
Sbjct: 98 FGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGGALRDMV 151
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLK 187
+ W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR +L+
Sbjct: 152 VALGWESFTIIYESGEYLPTVRELLQMYGT-------AGPTVTVRRYELDLNGNYRNVLR 204
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+N+ + ++ SM KQA++V L+ YI+ ++ HT+D + +Q
Sbjct: 205 RIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGN----LDWHTMDLEPYQHA 260
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 261 GTNITGLRLVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLAETY 316
Query: 308 QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F LE +
Sbjct: 317 KHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFELEVI 372
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E + +G W+ G +R +E ++ +K+F + + EPY
Sbjct: 373 ELAVSGMQKIGQWSGEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--SEPY 424
Query: 428 MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WNG++
Sbjct: 425 GMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGML 483
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P S +
Sbjct: 484 REIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGE 543
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
VW+++ AY+GVS+ +F L R+S
Sbjct: 544 VWLWLGLAYMGVSISMFVLGRLS 566
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 677 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 733
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 734 TQVGALLDEKGYGIAM 749
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 610 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 669
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 670 GATFNFFK 677
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 724 GLIGEL 729
G++ E+
Sbjct: 481 GMLREI 486
>gi|442620196|ref|NP_001036735.2| CG5621, isoform D [Drosophila melanogaster]
gi|440217692|gb|ABI31186.2| CG5621, isoform D [Drosophila melanogaster]
Length = 906
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 306/563 (54%), Gaps = 49/563 (8%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P+ E++ F +A+ + N++ + D+ L + +E +S T+K +C + + A+
Sbjct: 45 PDLEKI---FHLAISKANEENE----DLQLHGVSVSIEPGNSFETSKKLCKMLRQNLVAV 97
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP S S+C ++P ++ WD +PT +N++P + + ++
Sbjct: 98 FGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALRDMV 151
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLK 187
+ W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR +L+
Sbjct: 152 VALGWESFTIIYESGEYLPTVRELLQ-------MYGTAGPTVTVRRYELDLNGNYRNVLR 204
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+N+ + ++ SM KQA++V L+ YI+ ++ HT+D + +Q
Sbjct: 205 RIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGN----LDWHTMDLEPYQHA 260
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 261 GTNITGLRLVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLAETY 316
Query: 308 QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F LE +
Sbjct: 317 KHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFKLEVI 372
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E + +G W+ G +R +E ++ +K+F + + EPY
Sbjct: 373 ELAVSGMQKIGQWSGEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--SEPY 424
Query: 428 MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WNG++
Sbjct: 425 GMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGML 483
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P S +
Sbjct: 484 REIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGE 543
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
VW+++ AY+GVS+ +F L R+S
Sbjct: 544 VWLWLGLAYMGVSISMFVLGRLS 566
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 677 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 733
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 734 TQVGALLDEKGYGIAM 749
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 610 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 669
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 670 GATFNFFK 677
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 724 GLIGEL 729
G++ E+
Sbjct: 481 GMLREI 486
>gi|195355632|ref|XP_002044295.1| GM15053 [Drosophila sechellia]
gi|194129596|gb|EDW51639.1| GM15053 [Drosophila sechellia]
Length = 956
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 306/563 (54%), Gaps = 49/563 (8%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P+ E++ F +A+ + N++ + D+ L + +E +S T+K +C + + A+
Sbjct: 45 PDLEKI---FHLAISKANEENE----DLQLHGVSVSIEPGNSFETSKKLCKMLRQNLVAV 97
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP S S+C ++P ++ WD +PT +N++P + + ++
Sbjct: 98 FGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALRDMV 151
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLK 187
+ W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR +L+
Sbjct: 152 VALGWESFTIIYESGEYLPTVRELLQMYGT-------AGPTVTVRRYELDLNGNYRNVLR 204
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+N+ + ++ SM KQA++V L+ YI+ ++ HT+D + +Q
Sbjct: 205 RIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGN----LDWHTMDLEPYQHS 260
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 261 GTNITGLRLVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLAETY 316
Query: 308 QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F LE +
Sbjct: 317 KHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFELEVI 372
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E + +G W+ G +R +E ++ +K+F + + EPY
Sbjct: 373 ELAVSGMQKIGQWSGEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--SEPY 424
Query: 428 MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WNG++
Sbjct: 425 GMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGML 483
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P S +
Sbjct: 484 REIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGE 543
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
VW+++ AY+GVS+ +F L R+S
Sbjct: 544 VWLWLGLAYMGVSISMFVLGRLS 566
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 677 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 733
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 734 TQVGALLDEKGYGIAM 749
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 610 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 669
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 670 GATFNFFK 677
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 724 GLIGEL 729
G++ E+
Sbjct: 481 GMLREI 486
>gi|307207206|gb|EFN84996.1| Glutamate receptor, ionotropic kainate 2 [Harpegnathos saltator]
Length = 1512
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 198/589 (33%), Positives = 308/589 (52%), Gaps = 68/589 (11%)
Query: 4 VGIFGPNEEEVATAFEIAVRRINK---DFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
G+F +E + FE +VR +NK D + L ++ L P +E D+ + +C
Sbjct: 627 AGLFD-EDEGIQRTFESSVRAVNKERHDNEELS-NVYLMPESNEIEP-DAFEVSARVCEM 683
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ G+ +FGPQ ++SMC D+PH+ D ++ P GV G+N+YP +
Sbjct: 684 VNLGVVGVFGPQDKVIAEHVQSMCDSMDVPHISVRQDSSEPSQP-RGV-GLNLYPHVSSL 741
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
++ ++ D W +F I+YE D+L+ ++ +L P S I L D
Sbjct: 742 ARVYDQLVTDFKWKSFAILYENTDSLIRMRLLLRRWD-------PHGNSAFIYHLG-DGP 793
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+YR ++++IK S +I++DCS D +L+QA++V ++ D Y + +TS ++ T+D
Sbjct: 794 NYREVMQQIKASELENIIIDCSYDILSEVLRQAQQVGILSD--RYRVIVTS--LDLQTLD 849
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+ +Q N T +R+I+P +P ++ + +NE G +++E ALMYDAV
Sbjct: 850 LEPYQYSGVNFTGMRIIDPEDPMVQQTVEK---HKNEWGLD---NPSQLRVEPALMYDAV 903
Query: 301 YLFAAALQSL-----GERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
LFA A + L G+ K LP C+ W+HGL + N M+S G+TG + D +
Sbjct: 904 QLFARAFKQLKDATKGDIKKLP----CDGSERWEHGLSLSNFMRSTETRGLTGLVKFD-R 958
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
G R++ L+ V + G WN++ G N E K E L++ +KTF
Sbjct: 959 DGFRSNIQLDIVRLSENGLIKSGVWNSSSGQNIDWLPEITKKSDVE------LSLQNKTF 1012
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
L L PY M+ L G + +D+I I+ L F Y L+ E+ YG+L
Sbjct: 1013 IVLISL--TPPYGMRKESWTMLSGNDRYEGFGIDIIHRISEILGFNY--TLQVESDYGSL 1068
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTL--------------- 514
N TG+W+G++G++ + ADLAI DLTITSER +AVDFTMPFM L
Sbjct: 1069 NKYTGRWSGMLGKIIAEEADLAITDLTITSERESAVDFTMPFMNLVKFNIYSKYKVAYHF 1128
Query: 515 -GISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
GISILY+KP K P LFSFL P S +VW+Y+ AY+ VS+LL+ + R+
Sbjct: 1129 TGISILYKKPTKAPPSLFSFLSPFSNEVWLYLIGAYIVVSILLYMIGRL 1177
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 149/231 (64%), Gaps = 17/231 (7%)
Query: 338 MKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ-WKVLGTWNTAFGLNHSRTVEQMD 396
MK + + G+TG I D Q G R+ F L+ +E S + K +GTWN+ G+N +R+ +
Sbjct: 1 MKIVEMTGLTGIIKFDHQ-GFRSDFMLDIIELNSKEGLKKIGTWNSTKGINFTRSYGDVY 59
Query: 397 KEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIAN 450
+ E ++N+T VT+ A PY M+ + +L G YSVDLI I+
Sbjct: 60 TQIVENLQNKTFIVTTILSA---------PYCMRKDSSEKLTGNAQFEGYSVDLIYEISR 110
Query: 451 ELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMP 510
L F Y F L + YG+ N QT +W+G++ EL +Q+ADLAI DLTIT +R AVDFTMP
Sbjct: 111 LLGFNYTFRLVPDGRYGSYNKQTKEWDGMMKELLDQKADLAIADLTITYDREQAVDFTMP 170
Query: 511 FMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
FM LGISILYRKP K+ P+LFSFL PLS DVW+YMATAYLGVS+LLF LAR
Sbjct: 171 FMPLGISILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAR 221
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++SN S YQRM S M+S++P+VF SN EGV+RV+K KG YAF MEST IEY +E+NCDL
Sbjct: 389 RDSNFSTYQRMWSFMDSAKPTVFTSSNVEGVDRVIKGKGSYAFLMESTSIEYVIERNCDL 448
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGGLLDSKGYGIAM P S + S KL+ +G+ +M+K
Sbjct: 449 TQVGGLLDSKGYGIAMPPNSPYRTAISGAILKLQE--EGKLHMLK 491
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 57/67 (85%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ EDLAK +IKYG ++ G
Sbjct: 323 KAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALKGG 382
Query: 814 STRNFFK 820
ST FF+
Sbjct: 383 STAAFFR 389
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
+STR++AG WWFF LI++SSYTANLAAFLT + P NVE+L K +KYG + GS
Sbjct: 1223 GISTRMMAGSWWFFCLIIVSSYTANLAAFLTIETVVSPFDNVEELVKKKTVKYGAKQKGS 1282
Query: 815 TRNFFK 820
T FF+
Sbjct: 1283 TFKFFE 1288
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN S Y+ M+ M ++ V N++GV++V+ + YAF MES+ IEY +E+ C++
Sbjct: 1288 EESNYSTYKEMYEYMIANADDVLPMYNEDGVQKVITDN--YAFLMESSSIEYIMERECNV 1345
Query: 633 MQVGGLLDSKGYGIAM 648
QVGGLLD K YGIAM
Sbjct: 1346 TQVGGLLDEKNYGIAM 1361
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ + +L G YSVDLI I+ L F Y F L + YG+ N QT +W+G+
Sbjct: 80 PYCMRKDSSEKLTGNAQFEGYSVDLIYEISRLLGFNYTFRLVPDGRYGSYNKQTKEWDGM 139
Query: 726 IGELQEQ 732
+ EL +Q
Sbjct: 140 MKELLDQ 146
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE-LQEQVDTFI 737
G+ +D+I I+ L F Y L+ E+ YG+LN TG+W+G++G+ + E+ D I
Sbjct: 1040 GFGIDIIHRISEILGFNY--TLQVESDYGSLNKYTGRWSGMLGKIIAEEADLAI 1091
>gi|1480300|emb|CAA60854.1| glutamate receptor InvGluR-K1 polypeptide [Lymnaea stagnalis]
Length = 953
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 294/571 (51%), Gaps = 37/571 (6%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI G+FG +E + AF AV RIN D + L + L +Q + DS ++K +C
Sbjct: 29 LKIGGLFGEGDEHTSIENAFRYAVYRINHD-RQLLANTKLTYDIQSLSIADSFGSSKKVC 87
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ + A+FGP++ + S+C IPH+E D + +N+YP S
Sbjct: 88 HQIEQNTIAVFGPRAEHLAGFVNSLCASLQIPHMEMRSDSGGSYPTQPHALTINLYPSSQ 147
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ + + +I W +IY T L +Q+VL +EI +R + D
Sbjct: 148 QLGRAYTDLIAYYGWTEMLVIYGTAQGLSRVQKVLRGDFGSLEEI-------IVRHV--D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ R +LKE KN +L+D +D T LK A + ++ Y +YI++ ++ +
Sbjct: 199 GANMRLILKEAKNERRRRMLVDLPVDDTTLFLKMALQEGMIDPYHHYIVT----HLDIES 254
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAE-TVKIEAALM 296
+D +DF+ Y N+T R+++P++P ++ I++ IYE LN ++ E ALM
Sbjct: 255 IDMEDFRHNYVNLTGFRLVDPSDPQVKKIIHDMEIYEMQTDLSLLNTTGYLSLPHEVALM 314
Query: 297 YDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
YD+VYL A AL+ L P SC PS W G + + + I + G+TG I L S
Sbjct: 315 YDSVYLLANALERYATSAILRPLNASCSTPSQWASGPSLYSFLNQIPMKGLTGDILLKS- 373
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
G R F L+ ++ S G W + G+N S Q N+TL VTS
Sbjct: 374 -GTRIDFKLDIMQLTSKGLVKGGEWRVSSGINISYHEGQ---NSGNPFGNKTLVVTS--- 426
Query: 416 AKLRVLFQGEPYMM--KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ 472
+ P++M +NP E + G+ +DL K +A + F ++ L + YG+ N +
Sbjct: 427 ------LKESPFLMDRENPSPDEPFEGFCIDLTKELAKIVGFNFRIELVPDGNYGSPNAE 480
Query: 473 TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFS 532
G+W+G++ E+ ++RADLAI LTIT R +DFT PF+ LGISIL++ P K++P LFS
Sbjct: 481 -GEWDGMVREIIDRRADLAIAPLTITYIREQVIDFTKPFLNLGISILFKVPRKEKPGLFS 539
Query: 533 FLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FL PL+ ++W+Y+ AYL VS +F LAR S
Sbjct: 540 FLNPLAVEIWLYVIGAYLIVSFTIFTLARFS 570
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 11/115 (9%)
Query: 559 LAR---ISSGSRLRYSA----KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKG 611
LAR I G+R+ S K+SN+ Y+RM++ M+ RP V S EG+ +V +KG
Sbjct: 659 LARQTEIEYGTRVSSSTLSFFKDSNIDTYKRMYAYMKD-RPHVMSDSYTEGIAKV--KKG 715
Query: 612 KYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLR 665
YAFFME+ I+Y+V++NCDLMQVGG LDSK YGI +P S + K S +L+
Sbjct: 716 NYAFFMENLMIDYQVQRNCDLMQVGGTLDSKSYGIGLPMNSPYRDKLSMAILELQ 770
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
AVSTR+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLA+ I+YG S
Sbjct: 615 AVSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLARQTEIEYGTRVSSS 674
Query: 815 TRNFFK 820
T +FFK
Sbjct: 675 TLSFFK 680
>gi|21355999|ref|NP_650927.1| CG5621, isoform A [Drosophila melanogaster]
gi|15291175|gb|AAK92856.1| GH10694p [Drosophila melanogaster]
gi|23171826|gb|AAF55821.2| CG5621, isoform A [Drosophila melanogaster]
gi|220956702|gb|ACL90894.1| CG5621-PA [synthetic construct]
gi|220960112|gb|ACL92592.1| CG5621-PA [synthetic construct]
Length = 822
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 306/566 (54%), Gaps = 46/566 (8%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGI 65
++ + ++ F +A+ + N++ + D+ L + +E +S T+K +C + +
Sbjct: 39 VYENTDPDLEKIFHLAISKANEENE----DLQLHGVSVSIEPGNSFETSKKLCKMLRQNL 94
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGIS 125
A+FGP S S+C ++P ++ WD +PT +N++P + +
Sbjct: 95 VAVFGPTSNLAARHAMSICDAKELPFLDTRWDFGAQ-LPT-----INLHPHPATLGVALR 148
Query: 126 VIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRP 184
++ + W++FTIIYE+ + L ++++L+ P+VT+R+ D + +YR
Sbjct: 149 DMVVALGWESFTIIYESGEYLPTVRELLQMYGT-------AGPTVTVRRYELDLNGNYRN 201
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+L+ I+N+ + ++ SM KQA++V L+ YI+ ++ HT+D + +
Sbjct: 202 VLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGN----LDWHTMDLEPY 257
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFA 304
Q NIT +R+++P + ++ + +YE E ++++ + AL+YD V L A
Sbjct: 258 QHAGTNITGLRLVSPDSEQVQEVAKA-LYESEEPFQNVSC---PLTNSMALVYDGVQLLA 313
Query: 305 AALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
+ + R P LSC + S+W G + N MKS+T++G+TG I D + G R F L
Sbjct: 314 ETYKHVNFR---PVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYE-GLRTDFKL 369
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
E +E + +G W+ G +R +E ++ +K+F + +
Sbjct: 370 EVIELAVSGMQKIGQWSGEDGFQENRPA------PAHSLEPDMRSLVNKSFVVITAI--S 421
Query: 425 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++ E+ + RAD+ I DLT+TSER + VDFT+PFM+LGI IL+RKP K+ P LFSF+ P
Sbjct: 481 GMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPF 540
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S +VW+++ AY+GVS+ +F L R+S
Sbjct: 541 SGEVWLWLGLAYMGVSISMFVLGRLS 566
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K SN YQRM+ M + P +N+EGV+RV E YAF MEST IEY E+ C L
Sbjct: 677 KESNYPTYQRMYEFMRDN-PQYMTNTNQEGVDRV--ENSNYAFLMESTTIEYITERRCTL 733
Query: 633 MQVGGLLDSKGYGIAM 648
QVG LLD KGYGIAM
Sbjct: 734 TQVGALLDEKGYGIAM 749
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A STR VA WWFFTLI++SSYTANLAAFLT + PI + +DL+K G + YG
Sbjct: 610 KAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIG 669
Query: 813 GSTRNFFK 820
G+T NFFK
Sbjct: 670 GATFNFFK 677
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 723
EPY M ET E G+ ++LI ++ +L F+Y + L+ +N YG ++P+TG+WN
Sbjct: 422 EPYGMLK-ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWN 480
Query: 724 GLIGEL 729
G++ E+
Sbjct: 481 GMLREI 486
>gi|260784242|ref|XP_002587177.1| hypothetical protein BRAFLDRAFT_128813 [Branchiostoma floridae]
gi|229272316|gb|EEN43188.1| hypothetical protein BRAFLDRAFT_128813 [Branchiostoma floridae]
Length = 823
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 308/568 (54%), Gaps = 52/568 (9%)
Query: 11 EEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFG 70
+EEVA F+ A+ INK+ L ++ I Q ++ DS ++ C + G+AAI G
Sbjct: 5 DEEVA--FKFAMNEINKNATLLAGSTLISDI-QQIKVNDSYEASRAACFQLTLGVAAIVG 61
Query: 71 PQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIND 130
P S + ++S+C +P+++ W+P++ + VN+YP++ ++S+ I ++N
Sbjct: 62 PSSPRSSPTVQSLCTALTVPNIQTTWNPDQ----VEDRYSVNLYPDALMLSQAILDMVNY 117
Query: 131 MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIK 190
W +++Y++ D L+ LQ++L+ P R + ++ +D +LK+ K
Sbjct: 118 YGWTRVSLLYDSDDALIRLQELLK---------APARTKMELKIRKLRREDGEGVLKDCK 168
Query: 191 NSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYAN 250
++I++D S +K +L +A ++ +M + +YI++ ++ TVD ++++ G N
Sbjct: 169 LDGSNNIIIDVSYEKLPRVLHKALQLGMMTHFYHYIVTS----LDLATVDLENYRHGDVN 224
Query: 251 ITTVRMINPTNPHIRSIMNGWIYEENERGR-SLNVRAETVK----IEAALMYDAVYLFAA 305
+T R+++ NP ++ ++ W R R S NV + T+K ALM+DA+Y+ A
Sbjct: 225 LTAFRLVDNKNPRVQEVLRDWT-----RVRESSNVISGTIKDGLTTPVALMFDAIYVLVA 279
Query: 306 ALQS--LGERKPLPTPLSCENPSSWQHGLGIGNLMKSITI-DGMTGRINLDSQTGRRNSF 362
L+ +G+ L + LSC+N +W +G + N +K + DG++GRI DS G+R F
Sbjct: 280 GLEGSDVGQEISL-SKLSCDNRKAWLYGHTVLNYLKVAELQDGLSGRIKFDSN-GQRTKF 337
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEK-KEKIENRTLTVTSKTFAKLRVL 421
SL+ +E LGTWN+ + T + + N+TL VT+
Sbjct: 338 SLDVMELREAGLTKLGTWNSGERQALNITDRSLAGSNVTNSLRNKTLIVTT--------- 388
Query: 422 FQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
+PY+M+ EL G + +DL+ IA L F Y+ L + YG + G+
Sbjct: 389 ILEKPYVMQKRSDEELLGNDRFEGFCIDLLNEIAAILGFKYEIYLVPDGQYGA-PMEDGE 447
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
W+G++ EL +QRADLA+ LTI+ R +DF+ PFM +G++I+YR P + P +FSFL
Sbjct: 448 WSGMVKELIDQRADLAVAPLTISFIREQVIDFSKPFMNVGVTIMYRVPNRTNPGVFSFLN 507
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
PLS+D+W+Y+ +YL VS +LF LAR S
Sbjct: 508 PLSYDIWLYILLSYLAVSGVLFVLARFS 535
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 73/117 (62%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FVL R + Y NP N E Q + + F I + + + A+STRLV+G
Sbjct: 529 FVLARFSPYEWYNPHPCNPNSEYLENQFTLLNSMWFSIGAFMQQGSEIMPRALSTRLVSG 588
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
WWFFTLIMISSYTANLAAFLT RM PI++ +DLAK +IKYG ++ G+T+ FFK
Sbjct: 589 AWWFFTLIMISSYTANLAAFLTVERMESPIESADDLAKQTKIKYGTLDFGATQTFFK 645
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
KNS + Y++M + M S PSVF KS +EG++RV+ E YAF +ES EY +NC+L
Sbjct: 645 KNSKIPTYEKMWAFMSSQEPSVFTKSTEEGIDRVLNEN--YAFLLESAMNEYFTHRNCNL 702
Query: 633 MQVGGLLDSKGYGIAMP 649
+VGGLLDSKGYGI P
Sbjct: 703 TRVGGLLDSKGYGIGTP 719
>gi|383865951|ref|XP_003708435.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Megachile
rotundata]
Length = 957
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 296/574 (51%), Gaps = 49/574 (8%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI IF ++++ +T AF+ AV +INKD + P LE +Q+V DS H +K C
Sbjct: 29 VKIGAIFTHDQKDSSTEVAFKYAVYKINKD--RILPRTTLEYDIQYVPKDDSFHASKKAC 86
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ A+FGP I S+C DIPH+EA D + K F +N+YP
Sbjct: 87 QQVKYGVQAVFGPSDPILGQHIHSICDALDIPHLEARLDLDTEAKEF-------SINLYP 139
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE LV L++++ + + E V +RQ
Sbjct: 140 AQTLLNAAYQDIMEFLNWTKVAIIYEDDYGLVKLRELVRSPKSREME-------VNLRQA 192
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L E+K+ ++++D + L+ ++ M DY+ + L T +
Sbjct: 193 DPDS--YRQVLSEMKSKEIRNLVVDTKPEHMHHFLRMILQLQ-MNDYKYHYLFTT---FD 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ + NIT R+++ + +R I+ + G ++ +++ ++ E AL
Sbjct: 247 IETFDLEDFKYNFVNITAFRLVDAEDVAVRGILRD-MERYQPSGNTILNKSKVIQAEPAL 305
Query: 296 MYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
MYD+V +FA L++L + L P +SCE W GL + N + S+ + G++G I
Sbjct: 306 MYDSVQVFAEGLRTLEQSHALRPANISCELEHPWDGGLSLINYINSVVMKGISGPIEF-- 363
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR F L+ ++ +G W G+N + T E + VT
Sbjct: 364 KEGRRIQFKLDLLKLKQHSLVKVGEWRPGAGVNVTDTAA--------FFEPGSANVTLLV 415
Query: 415 FAKLRVLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
L + PY+M + E YG+ VDL++ +A E+ FTY+ L + YG
Sbjct: 416 ITILEI-----PYVMMHYEKNYTGNARFYGFCVDLLEAVAREVGFTYRLELVPDRKYGAK 470
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+P+TG+WNG++ EL +ADLA+ +TI R + +DFT PFM LGISIL++ P
Sbjct: 471 DPETGEWNGIVRELMRHKADLAVGSMTINYARESVIDFTKPFMNLGISILFKVPTSHPAR 530
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS+ +F +AR S
Sbjct: 531 LFSFMNPLAIEIWLYVLAAYVLVSVTMFVVARFS 564
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 69/117 (58%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP + + E Q + F I +++ +A STR+V G
Sbjct: 558 FVVARFSPYEWNNPHPCHADSEVVENQFSLANSFWFTIGTLMQQGSDLNPKATSTRIVGG 617
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI+N EDLA I YG ++ GST FF+
Sbjct: 618 IWWFFTLIIISSYTANLAAFLTVERMITPIENAEDLAGQTDIAYGTLDSGSTMTFFR 674
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M ME+ +PSVFV + +EG++RV++ G YAF MEST
Sbjct: 664 LDSGSTMTF-FRDSMIETYKKMWRFMENKKPSVFVPTYEEGIQRVLQ--GDYAFLMESTM 720
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 721 LDYIVQRDCNLTQIGGLLDSKGYGIATPMGSPWRDKISLAILELQ 765
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E I+++++ K L++VG G + T+ F S L +
Sbjct: 363 FKEGRRIQFKLDLLKLKQHSLVKVGEWRPGAGVNVT-DTAAFFEPGSANVTLLVITILEI 421
Query: 672 PYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + E YG+ VDL++ +A E+ FTY+ L + YG +P+TG+WNG++
Sbjct: 422 PYVMMHYEKNYTGNARFYGFCVDLLEAVAREVGFTYRLELVPDRKYGAKDPETGEWNGIV 481
Query: 727 GEL 729
EL
Sbjct: 482 REL 484
>gi|332020991|gb|EGI61384.1| Glutamate receptor, ionotropic kainate 1 [Acromyrmex echinatior]
Length = 802
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 316/575 (54%), Gaps = 48/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDF---KALPPDIILEPIVQHVENYDSLHTAKLM 57
+ IVG+F +E + FE +VR +N++ + L + E ++ +E D + +
Sbjct: 26 ISIVGLFD-QDEAMKQMFESSVRAVNQNRYEDQELSNQVFFESKIEQIEG-DPFEVSSKV 83
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C GI +IFGPQ ++S+C + +IP + D ++ F + G+ +N+YP
Sbjct: 84 CELLDLGIVSIFGPQEKVIAEHVQSICDVVEIPQISVREDLDQSF-HSRGI-ALNLYPHV 141
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLE--NAHDDDKEIRPGRPSVTIRQL 175
+ +S+ + ++ ++ W +F I+YE D+L+ ++ +L+ +AH S I L
Sbjct: 142 NSLSRIYNQLVTELKWKSFAILYENTDSLIRMRLLLKRWDAHGSAN-------SAFIYHL 194
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
+ YR ++EIK S+ +I++DCS + +LKQA++V ++ D Y + +TS ++
Sbjct: 195 GYGPN-YRQGMQEIKASNIQNIVIDCSYEILDEVLKQAQQVGILSD--KYKIIVTS--LD 249
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T+D + +Q N T +R+I+P +P + I N ++ SL+ +++E AL
Sbjct: 250 LQTLDLEPYQFSGVNFTGIRLIDPEDPTVLQIAN-----RHQDEWSLD--PLQLRVEHAL 302
Query: 296 MYDAVYLFAAALQSLGER-KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
MYDAV LFA A + L + K LSC+ S W+HGL + N M+S G+TG + D
Sbjct: 303 MYDAVQLFARAFKQLKDATKGNVKKLSCDGDSRWEHGLSLSNFMRSTETRGLTGLVKFD- 361
Query: 355 QTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ G R++ L+ V + + +G WN+ G N +E +K +++ L + +K
Sbjct: 362 RDGLRSNIKLDIVRLTEKKGLIKIGEWNSTAGEN----IEWFPDINTQKSDSK-LNIQNK 416
Query: 414 TFAKLRVLFQGEPY-MMKNP----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
TF L L PY M+K E Y G++VD+I+ I+ L F Y L+ E+ YG
Sbjct: 417 TFIVLISLTH--PYGMIKESMITLSGNERYEGFAVDVIQEISQILEFNY--TLQVESDYG 472
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
++ + GKW+G++G++ ADLAI DLTITS R DFT P M LGISILY++P K
Sbjct: 473 SM--KDGKWSGMLGKIMADEADLAITDLTITSTRAIDFDFTTPIMNLGISILYKRPTKAP 530
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
P LFSFL P S DVW+Y+ AY+ VSLLL+ + RI
Sbjct: 531 PSLFSFLSPFSNDVWIYLMGAYVIVSLLLYIIGRI 565
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
+STR+VA WWFF LIM+SSYTANLAAFLT + P NVE+L K IKYG G+
Sbjct: 611 GISTRMVASCWWFFCLIMVSSYTANLAAFLTVETVTSPFDNVEELVKKKTIKYGAKRKGA 670
Query: 815 TRNFFKV 821
T NFF +
Sbjct: 671 TLNFFGI 677
>gi|449485622|ref|XP_004175688.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Taeniopygia
guttata]
Length = 823
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/571 (30%), Positives = 284/571 (49%), Gaps = 82/571 (14%)
Query: 3 IVGIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+ GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++ C
Sbjct: 5 VRGIFETVENEPVNIEELAFKFAVTNINRN-RTLMPNTTLTYDIQRINLFDSFEASRRAC 63
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ + G+AA+FGP + + ++S+C ++PH++ W + +N+YP+
Sbjct: 64 DQLALGVAALFGPAHSSSVSAVQSICNALEVPHIQTRWKHPT--VDNRDAFYINLYPDYA 121
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
IS+ + ++ +W T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 122 AISRAVLDLVLYYNWKIITVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLPSG 174
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
D RPLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++
Sbjct: 175 NKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTT----LDLFA 230
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+D + ++ N+T R++N NPH+ S+++ W E +++A
Sbjct: 231 LDLEPYRYSGVNMTGFRLLNVENPHVSSVVDKWSME---------------RLQAP---- 271
Query: 299 AVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGR 358
P P S GL G + + +G+TGRI + G
Sbjct: 272 ------------------PKPDS---------GLRDGTM--TARWEGLTGRITFNKTDGL 302
Query: 359 RNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKL 418
R F L+ + + + +G WN+ GLN + + + + + NRTL VT+
Sbjct: 303 RKDFDLDIISLKEEGTEKIGVWNSYSGLNMTDSNKDRSTNITDSLANRTLIVTT------ 356
Query: 419 RVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQ 472
+PY+M LYG Y +DL+K ++N L F Y+ L + YG N +
Sbjct: 357 ---ILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDK 413
Query: 473 TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFS 532
G+WNG++ EL + +ADLA+ LTIT R +DF+ PFMTLGISILYRKP P +FS
Sbjct: 414 -GEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 472
Query: 533 FLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 473 FLNPLSPDIWMYVLLACLGVSCVLFVIARFT 503
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 547 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 606
Query: 814 STRNFFK 820
ST FFK
Sbjct: 607 STMTFFK 613
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N EG++RV+ YA MEST IEY ++NC+L
Sbjct: 613 KKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 670
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 671 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 713
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M LYG Y +DL+K ++N L F Y+ L + YG N + G+WNG
Sbjct: 360 DPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDK-GEWNG 418
Query: 725 LIGEL 729
++ EL
Sbjct: 419 MVKEL 423
>gi|91091818|ref|XP_966528.1| PREDICTED: similar to ionotropic glutamate receptor subunit ia
[Tribolium castaneum]
gi|270001103|gb|EEZ97550.1| hypothetical protein TcasGA2_TC011400 [Tribolium castaneum]
Length = 870
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 293/574 (51%), Gaps = 49/574 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF ++ AF A+ +I +E +V++V D C+
Sbjct: 21 LKIGAIFDTDDPIKERAFHHAIHQIEPIHGR-----TIEGLVKNVPPNDPFEAMLAACHL 75
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G AI GP + EN ++++++C DIP D P N + N YP ++
Sbjct: 76 IESGAVAILGPTTHENAHMVQTVCDNKDIP----LLDVRSVAHPQNSI---NFYPLQQIL 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLE---NAHDDDKEIRPGRPSVTIRQLPP 177
++ ++ +++ F I+YE D+L+ L ++L+ N H + +RQL
Sbjct: 129 TQIYIKLLEAWNFENFVILYENDDSLIRLAELLKFYGNGH-----------RMVVRQLDK 177
Query: 178 -DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+YRP LKE+ S +H +LDCS D +L QA++V L+ + Q YI++ +
Sbjct: 178 YQNGNYRPTLKEVWRSGATHFVLDCSTDILEEVLHQAQQVGLVTNKQFYIITNLDF---- 233
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN-VRAETVKIEAAL 295
HT+D FQ NIT +R I+P + I++ + +Y + + A V +E AL
Sbjct: 234 HTLDLTSFQYSETNITGMRFIDPDSDEIQN-LGLTLYRNDFTNTEFGFIEAWKVNLEMAL 292
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
+ DAV +F L L + +P+ + C + +W +G + NL+KS+ G TG I D+
Sbjct: 293 IIDAVTMFGEVLNRLPKDFAIPS-IDCASDKAWTYGTTLTNLVKSVKYPGYTGLIQFDN- 350
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
G R++F LE +E +G WN + GLN +R + +E ++ ++TF
Sbjct: 351 FGLRSAFGLEIIELKEGGIIKIGNWNYSDGLNINRVYP---PDPPPLVEG---SLVNRTF 404
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ L EPY M+ LYG + +DLI ++ +L F Y F++ + G
Sbjct: 405 IVITCL--TEPYGMRRDSEVPLYGNERYEGFGIDLIAELSKKLGFNYTFIIREDKKNGEF 462
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ +G+W G+IG++ +ADLAI DLTITSER +AVDF+ FM+LGISILY+KP K P
Sbjct: 463 DESSGEWTGMIGDVISGKADLAITDLTITSERESAVDFSTTFMSLGISILYQKPKKALPS 522
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSF +P S VW +A A+ G S+ LF L RIS
Sbjct: 523 FFSFADPFSLTVWKLLAAAFFGASIALFILGRIS 556
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGR---IKYGCVE 811
A STR+VAGMWWFFTLIM+SSYTANLAAFLT + P K+V +L + IK+G
Sbjct: 600 AFSTRMVAGMWWFFTLIMVSSYTANLAAFLTTESPDLPFKDVFELVQVAEKKGIKFGAKI 659
Query: 812 MGSTRNFF 819
GST FF
Sbjct: 660 NGSTEKFF 667
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 558 FLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
F A+I+ GS ++ + +V YQ+++ M++ V V NK+GV + E YAFFM
Sbjct: 655 FGAKIN-GSTEKFFLDSKHVDEYQQIYKYMKNHEDEVMVNDNKDGVHKA--EHEDYAFFM 711
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
E+T IEYE ++ C L VG LD KGYGIAM
Sbjct: 712 ETTSIEYETQRRCGLTSVGHSLDEKGYGIAM 742
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M+ LYG + +DLI ++ +L F Y F++ + G + +G+W G
Sbjct: 412 EPYGMRRDSEVPLYGNERYEGFGIDLIAELSKKLGFNYTFIIREDKKNGEFDESSGEWTG 471
Query: 725 LIGEL 729
+IG++
Sbjct: 472 MIGDV 476
>gi|444718638|gb|ELW59449.1| Glutamate receptor, ionotropic kainate 1 [Tupaia chinensis]
Length = 1000
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 285/570 (50%), Gaps = 84/570 (14%)
Query: 5 GIFGPNEEEVAT----AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
GIF E E AF+ AV IN++ + L P+ L +Q + +DS ++ C+
Sbjct: 30 GIFETVENEPVNVEELAFKFAVTSINRN-RTLMPNTTLTYDIQRINLFDSFEASRRACDQ 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD-PNKYFIPTNGVHGVNVYPESHL 119
+ G+AA+FGP + + ++S+C ++PH++ W P+ + + +N+YP+
Sbjct: 89 LALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS---VDNKDLFYINLYPDYAA 145
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
IS+ + ++ +W T T++YE L+ LQ++++ + +I+ IRQLP
Sbjct: 146 ISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIK-------IRQLPSGN 198
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
D +PLLKE+K E +++ DCS + ILKQ + +M +Y +Y + ++ +
Sbjct: 199 KDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT----LDLFAL 254
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDA 299
D + ++ N+T R++N NPH+ +I+ W E +++A
Sbjct: 255 DLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSME---------------RLQAP----- 294
Query: 300 VYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
P P + G+ + M + DG+TGRI + G R
Sbjct: 295 -----------------PRPET-----------GLLDGMMTARWDGLTGRITFNKTDGLR 326
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F L+ + + + +G WN+ GLN + + + + + NRTL VT+
Sbjct: 327 KDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSNNITDSLANRTLIVTT------- 379
Query: 420 VLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
EPY+M LYG Y +DL+K +++ L F Y L + YG N +
Sbjct: 380 --ILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSSILGFIYDVKLVPDGKYGAQNDK- 436
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
G+WNG++ EL + RADLA+ LTIT R +DF+ PFMTLGISILYRKP P +FSF
Sbjct: 437 GEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSF 496
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 497 LNPLSPDIWMYVLLACLGVSCVLFVIARFT 526
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 70/117 (59%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R Y NP + + E + F + +++ + +A+STR+V G
Sbjct: 520 FVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 579
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V GST FFK
Sbjct: 580 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFK 636
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG++RV+ YA MEST IEY ++NC+L
Sbjct: 636 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTD--YALLMESTSIEYVTQRNCNL 693
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 694 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 736
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K +++ L F Y L + YG N + G+WNG
Sbjct: 383 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSSILGFIYDVKLVPDGKYGAQNDK-GEWNG 441
Query: 725 LIGEL 729
++ EL
Sbjct: 442 MVKEL 446
>gi|133777614|gb|AAI23878.1| GRIK1 protein [Bos taurus]
Length = 796
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 267/542 (49%), Gaps = 79/542 (14%)
Query: 34 PDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE 93
P+ L +Q + +DS ++ C+ + G+AA+FGP + + ++S+C ++PH++
Sbjct: 2 PNTTLTYDIQKINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQ 61
Query: 94 AFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVL 153
W + + +N+YP+ IS+ + ++ +W T T++YE L+ LQ+++
Sbjct: 62 TRWKHPS--VDNRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELI 119
Query: 154 ENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQA 213
+ + +I+ IRQLP D +PLLKE+K E +++ DCS + ILKQ
Sbjct: 120 KAPSRYNIKIK-------IRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 172
Query: 214 KEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIY 273
+ +M +Y +Y + ++ +D + ++ N+T R++N NPH+ +I+ W
Sbjct: 173 LFMGMMTEYYHYFFTT----LDLFALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSM 228
Query: 274 EENERGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSS 327
E + R ET + EAALMYDAVY+ A A + + L C
Sbjct: 229 ERLQAPP----RPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLT--VSSLQCHRHKP 282
Query: 328 WQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLN 387
W+ G NL+K DG+TGRI + G R F L+ +
Sbjct: 283 WRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDII-------------------- 322
Query: 388 HSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELY------GYS 441
+ +E EK EPY+M LY GY
Sbjct: 323 ------SLKEEGTEK---------------------EEPYVMYRKSDKPLYGNDRFEGYC 355
Query: 442 VDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSER 501
+DL+K ++N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R
Sbjct: 356 LDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVR 414
Query: 502 RAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
+DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR
Sbjct: 415 EKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 474
Query: 562 IS 563
+
Sbjct: 475 FT 476
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 520 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 579
Query: 814 STRNFFK 820
ST FFK
Sbjct: 580 STMTFFK 586
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 586 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 643
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 644 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 686
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 333 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 391
Query: 725 LIGEL 729
++ EL
Sbjct: 392 MVKEL 396
>gi|195450607|ref|XP_002072557.1| GK13656 [Drosophila willistoni]
gi|194168642|gb|EDW83543.1| GK13656 [Drosophila willistoni]
Length = 712
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 289/574 (50%), Gaps = 49/574 (8%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF NE E + +AF+ A+ RINK+ K + P+ L +++V DS T K +C
Sbjct: 58 IRVGAIFTENERESSLESAFKYAIYRINKE-KEILPNTQLVYDIEYVPRDDSFRTTKKVC 116
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH-GVNVYPES 117
G+ AIFGP ++S+C+ +DIPH+E D + +NG +N+YP
Sbjct: 117 RQLDAGVQAIFGPTDSLLAGHVQSICEAYDIPHIEVRID-----LESNGKEFSINLYPSY 171
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
++++ ++ ++W +IYE L N E+R + IRQ P
Sbjct: 172 NILTMAYRDLMMYLNWTKVAVIYEEDYGLF-------NLMHSSTELRT---EMYIRQASP 221
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DT YR +L+ I+ I++D + + ++ M D++ + + T +
Sbjct: 222 DT--YRQVLRAIRQKEIYKIIVDTNPANIKQFFRSILQLQ-MNDHRYHYMFTT---FDLE 275
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
T D +DF+ NIT R+++ + ++ + + G L +K EAALM+
Sbjct: 276 TYDLEDFRYNSVNITAFRLVDVGSKRYLDVIEH-MQKLQHSGLDLIHGQPYLKTEAALMF 334
Query: 298 DAVYLFAAALQSLGERKPLPTP---LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
D+VY FAA LQSL L LSC + +W GL + N + S T+DG+TG +N
Sbjct: 335 DSVYTFAAGLQSLHSDSGLALTFKNLSCSSDQTWGEGLSLYNYINSATVDGLTGNVNFIE 394
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
GRR F ++ ++ +Q + +G W G+N S D I N TL V ++
Sbjct: 395 --GRRTKFKIDILKLKQEQIQKVGYWEPDRGVNISDPTAFYDS----NIANITLVVMTR- 447
Query: 415 FAKLRVLFQGEPYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ PY+M + G+ +DL+K IA ++ F YK L +N YG
Sbjct: 448 --------EERPYVMVKEDANLTGNARFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVY 499
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 500 IPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTR 559
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 560 LFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 593
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA+ I YG +E G
Sbjct: 637 KATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGG 696
Query: 814 STRNFFK 820
ST FF+
Sbjct: 697 STMTFFR 703
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F+E +++++ K + +VG +G I+ PT+ + + + + + +
Sbjct: 392 FIEGRRTKFKIDILKLKQEQIQKVGYWEPDRGVNISDPTAFYDSNIA-NITLVVMTREER 450
Query: 672 PYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + G+ +DL+K IA ++ F YK L +N YG P+T WNG++
Sbjct: 451 PYVMVKEDANLTGNARFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIV 510
Query: 727 GELQEQ 732
EL E+
Sbjct: 511 QELMER 516
>gi|426217185|ref|XP_004002834.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 5 [Ovis
aries]
Length = 796
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 267/542 (49%), Gaps = 79/542 (14%)
Query: 34 PDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE 93
P+ L +Q + +DS ++ C+ + G+AA+FGP + + ++S+C ++PH++
Sbjct: 2 PNTTLTYDIQKINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQ 61
Query: 94 AFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVL 153
W + + +N+YP+ IS+ + ++ +W T T++YE L+ LQ+++
Sbjct: 62 TRWKHPS--VDNRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELI 119
Query: 154 ENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQA 213
+ + +I+ IRQLP D +PLLKE+K E +++ DCS + ILKQ
Sbjct: 120 KAPSRYNIKIK-------IRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 172
Query: 214 KEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIY 273
+ +M +Y +Y + ++ +D + ++ N+T R++N NPH+ +I+ W
Sbjct: 173 LFMGMMTEYYHYFFTT----LDLFALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSM 228
Query: 274 EENERGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSS 327
E + R ET + EAALMYDAVY+ A A + + L C
Sbjct: 229 ERLQAPP----RPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLT--VSSLQCHRHKP 282
Query: 328 WQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLN 387
W+ G NL+K DG+TGRI + G R F L+ +
Sbjct: 283 WRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDII-------------------- 322
Query: 388 HSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELY------GYS 441
S E +KE EPY+M LY GY
Sbjct: 323 -SLKEEGTEKE--------------------------EPYVMYRKSDKPLYGNDRFEGYC 355
Query: 442 VDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSER 501
+DL+K ++N L F Y L + YG N + G+WNG++ EL + +ADLA+ LTIT R
Sbjct: 356 LDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNGMVKELIDHKADLAVAPLTITYVR 414
Query: 502 RAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
+DF+ PFMTLGISILYRKP P +FSFL PLS D+W+Y+ A LGVS +LF +AR
Sbjct: 415 EKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 474
Query: 562 IS 563
+
Sbjct: 475 FT 476
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V G
Sbjct: 520 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDG 579
Query: 814 STRNFFK 820
ST FFK
Sbjct: 580 STMTFFK 586
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK++ EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 586 KKSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTD--YALLMESTSIEYVTQRNCNL 643
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 644 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQE--EGKLHMMK 686
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K ++N L F Y L + YG N + G+WNG
Sbjct: 333 EPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDK-GEWNG 391
Query: 725 LIGEL 729
++ EL
Sbjct: 392 MVKEL 396
>gi|351706278|gb|EHB09197.1| Glutamate receptor, ionotropic kainate 2 [Heterocephalus glaber]
Length = 832
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 276/561 (49%), Gaps = 72/561 (12%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF AV IN++ + L P+ L Q + YDS +K C+ S G+AAIFGP +
Sbjct: 7 AFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSS 65
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKGISVIINDMDWDT 135
N ++S+C +PH++ W K+ + N V++YP+ +S+ I ++ W T
Sbjct: 66 ANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKT 122
Query: 136 FTIIYETHDN-----------LVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
T++Y+ + L+ LQ++++ + ++ IRQLP DT D +P
Sbjct: 123 VTVVYDDSTDQQPIKTELWAGLIRLQELIKAPSRYNLRLK-------IRQLPADTKDAKP 175
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
LLKE+K E H++ DCS + ILKQA + +M +Y +YI + ++ +D + +
Sbjct: 176 LLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----LDLFALDVEPY 231
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIEAALMYDAVYL 302
+ N+T R++N N + SI+ W E + + + + +AALMYDAV++
Sbjct: 232 RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHV 291
Query: 303 FAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
+ A+Q + + L C W+ G +L+K +G+TGRI + G R F
Sbjct: 292 VSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDF 349
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
L+ + + + + VLF
Sbjct: 350 DLDVISLKEEGLEKEEPY---------------------------------------VLF 370
Query: 423 QGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 482
+ + + E Y +DL++ +A L FTY+ L + YG + G+WNG++ E
Sbjct: 371 KKSDKPLYGNDRFEGY--CIDLLRELATILGFTYEIRLVEDGKYGAQDDANGQWNGMVRE 428
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
L + +ADLA+ L IT R +DF+ PFMTLGISILYRKP P +FSFL PLS D+W
Sbjct: 429 LIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIW 488
Query: 543 VYMATAYLGVSLLLFFLARIS 563
+Y+ AYLGVS +LF +AR S
Sbjct: 489 MYILLAYLGVSCVLFVIARFS 509
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 553 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 612
Query: 814 STRNFFK 820
+T FFK
Sbjct: 613 ATMTFFK 619
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 619 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLT--SDYAFLMESTTIEFVTQRNCNL 676
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 677 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 719
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY++ LYG Y +DL++ +A L FTY+ L + YG + G+WNG+
Sbjct: 366 PYVLFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLVEDGKYGAQDDANGQWNGM 425
Query: 726 IGEL 729
+ EL
Sbjct: 426 VREL 429
>gi|195064161|ref|XP_001996510.1| GH23957 [Drosophila grimshawi]
gi|193892056|gb|EDV90922.1| GH23957 [Drosophila grimshawi]
Length = 1045
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/571 (30%), Positives = 291/571 (50%), Gaps = 42/571 (7%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ +F +E E + +AF+ A+ RINK+ K+L P L +++V DS T K +C
Sbjct: 12 IRVGAVFTEDEREGGIESAFKYAIYRINKE-KSLLPHTQLVYDIEYVPRDDSFRTTKKVC 70
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+G+ AIFGP ++S+C+ FDIPH+E D + +N++P +
Sbjct: 71 RQLEDGVQAIFGPTDPLLAAHVQSICEAFDIPHIEVRIDLEM----SVKEFSINLHPSQN 126
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+++ ++ ++W IIYE L Q ++ ++ + R + IRQ P+
Sbjct: 127 IMNLAYRDLMMYLNWTKVAIIYEEDYGLFKQQDLIHSSAE-------MRTEMYIRQANPE 179
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
T YR +L+ I+ I++D + + ++ M D++ + + T + T
Sbjct: 180 T--YRQVLRAIRQKEIYKIIVDTNPTNIKAFFRSILQLQ-MNDHRYHYMFTT---FDLET 233
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
D +DF+ NIT R+++ + + +++ + + G + ++ E+ALM+D
Sbjct: 234 YDLEDFRYNSVNITAFRLVDVGSKRYQEVIDQ-MQKLQHSGLDIINGIPYIQTESALMFD 292
Query: 299 AVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
+VY FA L+ L L LSC + W GL + N + S T+DGMTGR+N G
Sbjct: 293 SVYAFAYGLKHLDSSHTLSFKNLSCNSDQVWSDGLSLYNYINSATVDGMTGRVNF--MEG 350
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
RRN F ++ ++ + + +G W G+N S D I N TL V ++
Sbjct: 351 RRNKFKIDILKLKQEIIQKVGYWQPDMGVNISDPTAFYD----SNIANITLVVMTR---- 402
Query: 418 LRVLFQGEPYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ 472
+ PY+M +T G+ +DL+K IA ++ F YK L +N YG P+
Sbjct: 403 -----EERPYVMVKEDTNLTGNARFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVYIPE 457
Query: 473 TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFS 532
T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P + LFS
Sbjct: 458 TNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFS 517
Query: 533 FLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 518 FMNPLAIEIWLYVLAAYILVSFALFVMARFS 548
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + SVFVK+ ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 823 RDSKIGIYQKMWRYMENRKSSVFVKTYEDGIKRVME--GNYAFLMESTMLDYAVQRDCNL 880
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 881 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 914
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 47/66 (71%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA I YG +E GS
Sbjct: 758 ATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMITPIESASDLADQTEISYGTLEGGS 817
Query: 815 TRNFFK 820
T FF+
Sbjct: 818 TMTFFR 823
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
FME +++++ K + +VG G I+ PT+ + + + + + +
Sbjct: 347 FMEGRRNKFKIDILKLKQEIIQKVGYWQPDMGVNISDPTAFYDSNIA-NITLVVMTREER 405
Query: 672 PYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M +T G+ +DL+K IA ++ F YK L +N YG P+T WNG++
Sbjct: 406 PYVMVKEDTNLTGNARFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIV 465
Query: 727 GELQEQ 732
EL E+
Sbjct: 466 QELMER 471
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSR 567
T F+ G + + + Q FSF+ PL+ ++W+Y+A Y+ VS+ ++ +AR+S
Sbjct: 579 TGTFLRQGSGLNPKISDRAQTKFFSFMNPLAIEIWLYIAFGYILVSICIWIVARLSPVEW 638
Query: 568 LR 569
+R
Sbjct: 639 VR 640
>gi|355557832|gb|EHH14612.1| hypothetical protein EGK_00568 [Macaca mulatta]
Length = 928
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 285/595 (47%), Gaps = 120/595 (20%)
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYP 115
L C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP
Sbjct: 35 LACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYP 92
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIR 173
+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IR
Sbjct: 93 DYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIR 143
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
QLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 144 QLPVDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT---- 199
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET----- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 200 LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDG 255
Query: 289 -VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQ---------------- 329
+ +AAL+YDAV++ + Q R P T L C +W+
Sbjct: 256 VMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEDLTWA 311
Query: 330 ---HGLGIGNLMKSITID---------GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVL 377
H G + + ID G+TGRI + +G R F L+ + D + +
Sbjct: 312 PPSHDFRAGTHLSASKIDVVHEKAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKV 371
Query: 378 GTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL 437
G W+ A GLN + + + + NR+L VT+ VL EP++M L
Sbjct: 372 GVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTT-------VL--EEPFVMFRKSDRTL 422
Query: 438 Y------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE------ 485
Y GY +DL+K +A+ L F+Y+ L + YG + + G+WNG++ EL +
Sbjct: 423 YGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNGMVKELIDHGCGEF 481
Query: 486 -------------------------------------QRADLAICDLTITSERRAAVDFT 508
++ADLA+ LTIT R A+DF+
Sbjct: 482 EPTEVEPGGDINLALEEGHSAAGLNLSQYEGHCWDLSRKADLAVAPLTITHVREKAIDFS 541
Query: 509 MPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PFMTLG+SILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 542 KPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 596
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 640 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 699
Query: 814 STRNFFK 820
+T FFK
Sbjct: 700 ATMTFFK 706
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 706 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 762
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 763 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 796
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 410 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 468
Query: 725 LIGEL 729
++ EL
Sbjct: 469 MVKEL 473
>gi|328705996|ref|XP_001949419.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Acyrthosiphon pisum]
Length = 883
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 290/559 (51%), Gaps = 51/559 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ AV +IN+D LP + I Q+V + DS +T K C+ GIAA+FGP +
Sbjct: 24 AFKFAVDQINRDAHLLPHTQVSYDI-QYVPHDDSFYTIKTACSQLDLGIAALFGPSNSYL 82
Query: 77 RNIIESMCQMFDIPHVEAFWD----PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMD 132
+ ++SMC D+PH+EA D P ++ +N+YP+ L++K S +I+ ++
Sbjct: 83 ASHLQSMCDALDLPHIEARLDLEMDPKRF--------SINLYPKQSLLNKAYSDVISFLN 134
Query: 133 WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI--RQLPPDTDDYRPLLKEIK 190
W IIYE +L ++ ++ P R +V + R P+T YR +L EIK
Sbjct: 135 WTKMAIIYEHDYDLFRMKDFMKTV--------PDRKTVEVYLRHATPET--YRSVLNEIK 184
Query: 191 NSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYAN 250
N ++L+D + L+ ++ M DY+ + L TS+ + D +DF+ + N
Sbjct: 185 NMEIYNMLVDTKSEHVDHFLRGILQLQ-MNDYKFHYL-FTSF--DMEMFDLEDFKYNFVN 240
Query: 251 ITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSL 310
+TT RM++ + +R ++ E+ +S+N + + E ALMYD+V + A L +L
Sbjct: 241 LTTFRMVDIEDVGVREVLKHMEQYSTEKNQSIN-KFMLTQCEPALMYDSVQVLAVGLGAL 299
Query: 311 GERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY 369
+ L P +SC++ W +G + N + S+ I G+TG I + G+R F L+ ++
Sbjct: 300 QQSHTLHYPNISCKDEVPWSNGSSLRNFINSVEIKGLTGPIQF--KNGQRTDFKLDLMKL 357
Query: 370 VSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM 429
+G W G+N + M N TL V V PY+M
Sbjct: 358 KQHALAKVGEWTPGLGVN----ITDMSAFHDTAPYNITLVV---------VTIVEFPYVM 404
Query: 430 KNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 484
+ + YG+ VDL+++IA ++ F Y L +N YG +P T +WNG++ +L
Sbjct: 405 MHLQKNYTGNARFYGFCVDLLEIIAKQVGFDYILDLVPDNKYGAQDPVTLEWNGIVEQLI 464
Query: 485 EQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVY 544
+ +ADLA+ +TI R + +DFT PFM LGISILY+ P+ + FSF+ PL+ +VW+Y
Sbjct: 465 KHKADLAVGSMTINYVRESVIDFTKPFMNLGISILYKVPSNQPAQFFSFMNPLALEVWIY 524
Query: 545 MATAYLGVSLLLFFLARIS 563
AY+ VS+ L+ +A+ S
Sbjct: 525 WLVAYVVVSVTLYIVAKFS 543
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SG+ + + ++S + Y++M + M+ +PSVFV S +G+ERV++ G +AF MEST
Sbjct: 650 LDSGTTMTF-FRDSMIETYKKMWAYMQKKKPSVFVTSYDDGIERVLQ--GNFAFLMESTM 706
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
++Y V++NC+L Q+ GLLDSKGYGIA P
Sbjct: 707 LDYAVQRNCNLTQINGLLDSKGYGIATP 734
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A ST+++ +WW FTLI++SSYTANLAAFLT RM PI+N EDLA I YG ++ G
Sbjct: 594 KAFSTKIIGCVWWSFTLIIVSSYTANLAAFLTVERMVSPIENAEDLAAQTNIAYGTLDSG 653
Query: 814 STRNFFK 820
+T FF+
Sbjct: 654 TTMTFFR 660
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 672 PYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + + YG+ VDL+++IA ++ F Y L +N YG +P T +WNG++
Sbjct: 401 PYVMMHLQKNYTGNARFYGFCVDLLEIIAKQVGFDYILDLVPDNKYGAQDPVTLEWNGIV 460
Query: 727 GEL 729
+L
Sbjct: 461 EQL 463
>gi|91091820|ref|XP_966620.1| PREDICTED: similar to ionotropic glutamate receptor subunit ia
[Tribolium castaneum]
Length = 910
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 274/518 (52%), Gaps = 47/518 (9%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ ++ IFGP++ E +I++S+C D+ HV W + + +N YP S
Sbjct: 87 CSLVNQQALVIFGPKNAEEIDIVQSICDNKDLAHVITRW----VYSSADFRSVINFYPHS 142
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
++ ++ +W T T+ YE +++++ L +L A ++ VT++QL
Sbjct: 143 AYLTSAYFSVLKLWNWKTLTVFYEDNESMLRLGDLLNLAKNEG-------IIVTVKQLYE 195
Query: 178 DTDD---YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM-GDYQNYILSLTSYW 233
D+ YR LKE S + + ++DC ++ +LKQA++V LM DY +I +L
Sbjct: 196 GLDETPIYRTTLKEAVRSGQKNFIIDCKIESLEEVLKQAQQVGLMTKDYNFFITNL---- 251
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNP--HIRSIMNGWIYEENERGRSLNVRAETVKI 291
+ T++ + FQ ANIT +R+++P N H+++ G I + N ++
Sbjct: 252 -DLQTINLEPFQYSEANITGIRILDPLNEMFHVKA---GAIMRQKP-----NFNLTKMRT 302
Query: 292 EAALMYDAVYLFAAAL-QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
E AL+ DAV + + + L ++ T +SC +P S +HG I N +K+ D MTGRI
Sbjct: 303 ETALLIDAVSVITQVISRKLSIKEMEMTEISCNSPKSSRHGYTIANHVKTSKFDEMTGRI 362
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D G R++F L+ +E + +GTWN + GL + K E I L++
Sbjct: 363 EFDGN-GVRSNFDLDVIELTQNGISKIGTWNMSKGL-------VITPHKDEDIVEDPLSL 414
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
+KTF + L +PY M +G+L+G +++DLI +A F Y F++ +
Sbjct: 415 RNKTFKVITCL--TDPYCMLKENSGQLFGNDRFEGFAIDLIHELAQMEGFNYTFIIREDK 472
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
+ G N TG+W+G+IG++ ADLAI DLTIT+ER AVDFT PFM LGISIL +KP
Sbjct: 473 SNGDKNKVTGEWSGMIGDVMHGVADLAITDLTITAEREEAVDFTSPFMNLGISILAKKPG 532
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
P FSF +P + D W+ +A AY+ VS+ F L RI
Sbjct: 533 NAPPSFFSFADPFALDTWIMLALAYIAVSVSFFVLGRI 570
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y+ + ME P V NK+GV+ KE YAFFMES IEYE +++CDL Q GGLL
Sbjct: 691 YKIIAKYMEE-HPDDMVGDNKDGVKLANKET--YAFFMESISIEYETQRHCDLQQYGGLL 747
Query: 640 DSKGYGIAM 648
D KGYGIAM
Sbjct: 748 DDKGYGIAM 756
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK---AGRIKYGCVE 811
V TR+VAGMWWFF LIM+SSYTA+LAAFL N +VE L + I+ G
Sbjct: 616 GVPTRMVAGMWWFFVLIMVSSYTASLAAFLANENTITLFTDVESLVQNYEEKGIRMGAKR 675
Query: 812 MGSTRNFFK 820
G+T FF+
Sbjct: 676 KGATEGFFR 684
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY M +G+L+G +++DLI +A F Y F++ + + G N TG+W+G
Sbjct: 427 DPYCMLKENSGQLFGNDRFEGFAIDLIHELAQMEGFNYTFIIREDKSNGDKNKVTGEWSG 486
Query: 725 LIGELQEQV 733
+IG++ V
Sbjct: 487 MIGDVMHGV 495
>gi|345488321|ref|XP_001605858.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Nasonia
vitripennis]
Length = 954
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 295/574 (51%), Gaps = 48/574 (8%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI IF ++ +T AF+ AV +INKD + + P+ L +Q+V DS H +K C
Sbjct: 34 IKIGAIFTHDQRNTSTELAFKYAVHKINKD-RIILPNTTLVYDIQYVPKDDSFHASKKAC 92
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ A+FGP I S+C DIPH+EA D + K F +N++P
Sbjct: 93 QQVKFGVQAVFGPSDPILGQHIHSICDALDIPHLEARLDLDSEAKEF-------SINLHP 145
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ ++ ++W IIYE L+ L++++ + D E V +RQ
Sbjct: 146 AQSLLNAAYQDVMTFLNWTKVAIIYEDDYGLIKLRELVRSRKAQDME-------VYLRQ- 197
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
D D YR +L EIK +I++D + L+ ++ M DY NY T++ +
Sbjct: 198 -ADLDSYRQVLSEIKAKEVHNIIVDTRAENMHHFLRMILQLQ-MNDY-NYHYLFTTF--D 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ + NIT R+++ + +R I+ + E LN ++ ++ E AL
Sbjct: 253 IETFDLEDFKYNFVNITAFRLVDAEDVGVRGILRDMEKFQTEGNNLLN-KSRVIQAEPAL 311
Query: 296 MYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
MYD+V +FA L++L + L P +SCE W GL + N + S+ + G++G I
Sbjct: 312 MYDSVQVFAVGLRTLEQSHALRPMNISCELEHPWDGGLSLINYINSVEMKGISGPIEF-- 369
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR F L+ ++ +G W G+N + T + T+ T
Sbjct: 370 KEGRRIQFKLDLLKLKQHSLVKVGEWRPGLGVNVTDTSAFFEP-----------GATNVT 418
Query: 415 FAKLRVLFQGEPYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ +L Q PY+M N E Y G+ +DL+K IA+ + F Y+ L + YG
Sbjct: 419 LVVITILEQ--PYVMLRSRGNFSGNERYEGFCIDLLKEIAHMVGFAYRIELVPDGKYGVY 476
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ +TG+WNG++ +L +++ADLA+ +TI R + +DFT PFM LGISIL++ P
Sbjct: 477 DYETGEWNGIVRQLMDKKADLAVGSMTINYARESVIDFTKPFMNLGISILFKVPTSHPAR 536
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS+ +F +AR S
Sbjct: 537 LFSFMNPLAIEIWLYVLAAYILVSVTMFVVARFS 570
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 69/117 (58%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP I E Q + F I +++ +A STR+V+G
Sbjct: 564 FVVARFSPYEWNNPHPCHSGPEIVENQFSLANSFWFTIGTLMQQGSDLNPKAASTRIVSG 623
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI+N EDLA I YG +E GST FF+
Sbjct: 624 VWWFFTLIIISSYTANLAAFLTVERMITPIENAEDLASQTDISYGTLESGSTMTFFR 680
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M ME+ +PSVFV + +EG+++V++ G YAF MEST
Sbjct: 670 LESGSTMTF-FRDSMIETYKKMWRFMENRKPSVFVPTYEEGIQKVLQ--GNYAFLMESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLD+KGYGIA P S + K S +L+
Sbjct: 727 LDYIVQRDCNLTQIGGLLDTKGYGIATPMGSPWRDKISLAILELQ 771
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E I+++++ K L++VG G + TS F + + + +
Sbjct: 369 FKEGRRIQFKLDLLKLKQHSLVKVGEWRPGLGVNVT-DTSAFFEPGATNVTLVVITILEQ 427
Query: 672 PYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M N E Y G+ +DL+K IA+ + F Y+ L + YG + +TG+WNG++
Sbjct: 428 PYVMLRSRGNFSGNERYEGFCIDLLKEIAHMVGFAYRIELVPDGKYGVYDYETGEWNGIV 487
Query: 727 GELQEQVDTF------ILFFIYSILFFIYTFVNEAVS------TRLVAGMWWFFTLIMIS 774
+L ++ I + S++ F F+N +S T A ++ F + I
Sbjct: 488 RQLMDKKADLAVGSMTINYARESVIDFTKPFMNLGISILFKVPTSHPARLFSFMNPLAIE 547
Query: 775 SYTANLAAFL 784
+ LAA++
Sbjct: 548 IWLYVLAAYI 557
>gi|354480211|ref|XP_003502301.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Cricetulus griseus]
Length = 983
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 197/624 (31%), Positives = 308/624 (49%), Gaps = 98/624 (15%)
Query: 5 GIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLM 57
GIF GPN + + AF + IN++ + L P+ L +Q + +DS K
Sbjct: 61 GIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEATKKA 119
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP+
Sbjct: 120 CDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYPDY 177
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQL 175
+S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IRQL
Sbjct: 178 ASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQL 228
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++
Sbjct: 229 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LD 284
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV------ 289
+ +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 285 LYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVM 340
Query: 290 -----KIEAALMYDAV---YLFAAALQS----LGERKPLPTPLS-C---ENPSSWQHGLG 333
+ +AA+ Y A+ + LQS L + K LP LS C + S GL
Sbjct: 341 MGSGGQAKAAMKYWAITGHFQNPGTLQSPVFPLSDSK-LPISLSDCVTGSDTGSPFPGLR 399
Query: 334 IGNLMKSI----------------------------TIDGMTGRINLDSQTGRRNSFSLE 365
G + I +G+TGRI + +G F
Sbjct: 400 GGGSFERIRDRCCTREGADVDLAKERNRIYGNRWLAQWEGLTGRIVFNKTSGFFFFFFFF 459
Query: 366 FVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGE 425
F + D + +G W+ A GLN + + + + NR+L VT+ VL E
Sbjct: 460 FFK--EDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTT-------VL--EE 508
Query: 426 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 479
P++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG+
Sbjct: 509 PFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNGM 567
Query: 480 IGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
+ EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP P +FSFL PLS
Sbjct: 568 VKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSP 627
Query: 540 DVWVYMATAYLGVSLLLFFLARIS 563
D+W+Y+ AYLGVS +LF +AR S
Sbjct: 628 DIWMYVLLAYLGVSCVLFVIARFS 651
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 695 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 754
Query: 814 STRNFFK 820
+T FFK
Sbjct: 755 ATMTFFK 761
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 761 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYITQRNCNL 817
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 818 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 851
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 508 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 566
Query: 725 LIGEL 729
++ EL
Sbjct: 567 MVKEL 571
>gi|263359630|gb|ACY70466.1| hypothetical protein DVIR88_6g0003 [Drosophila virilis]
Length = 914
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 176/574 (30%), Positives = 292/574 (50%), Gaps = 48/574 (8%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RINK+ K+L P+ L +++V DS T K +C
Sbjct: 45 IRVGAIFTEDEREGNIESAFKYAIYRINKE-KSLLPNTQLVYDIEYVPRDDSFRTTKKVC 103
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ AIFGP ++S+C+ FDIPH+E D K F +N+YP
Sbjct: 104 RQLEAGVQAIFGPTDPLLAAHVQSICEAFDIPHIEVRIDLEISVKEF-------SINLYP 156
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
++++ ++ ++W IIYE L Q ++ ++ + R + IRQ
Sbjct: 157 SQNIMNLAYRDLMMYLNWTKVAIIYEEDYGLFKQQDLIHSSAE-------MRTEMYIRQA 209
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P+T YR +L+ I+ I++D + T + ++ M D++ + + T +
Sbjct: 210 NPET--YRQVLRAIRQKEIYKIIVDTNPTNIKTFFRSILQLQ-MNDHRYHYMFTT---FD 263
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ NIT R+++ + + +++ + + G + ++ E+AL
Sbjct: 264 LETFDLEDFRYNSVNITAFRLVDVGSKRYQEVIDQ-MQKLQHSGLDMINGMPYIQTESAL 322
Query: 296 MYDAVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
M+D+VY FA L+ L L LSC + W GL + N + S +DG+TGR+N
Sbjct: 323 MFDSVYAFAYGLKHLDSSHTLTFRNLSCNSDRVWSDGLSLYNYINSAAVDGLTGRVNFIE 382
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
GRRN F ++ ++ + + +G W G+N S D I N TL V ++
Sbjct: 383 --GRRNKFKIDILKLKQEIIQKVGYWQPDVGVNISDPTAFYD----SNIANITLVVMTR- 435
Query: 415 FAKLRVLFQGEPYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ PY+M + + G+ +DL+K IA ++ F YK L +N YG
Sbjct: 436 --------EERPYVMVKEDANLTGNAKFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVY 487
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 488 IPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTR 547
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 548 LFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 581
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + SVFVKS ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 691 RDSKIGIYQKMWRYMENRKASVFVKSYEDGIKRVME--GNYAFLMESTMLDYAVQRDCNL 748
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 749 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 782
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP I E Q +
Sbjct: 553 NPLAIEIWLYVLAAYILVSFAL-----FVMARFSPYEWKNPHPCYKETDIVENQFSISNS 607
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++
Sbjct: 608 FWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMITPIESA 667
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA I YG +E GST FF+
Sbjct: 668 ADLADQTEISYGTLEGGSTMTFFR 691
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 672 PYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + + G+ +DL+K IA ++ F YK L +N YG P+T WNG++
Sbjct: 439 PYVMVKEDANLTGNAKFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIV 498
Query: 727 GELQEQ 732
EL E+
Sbjct: 499 QELMER 504
>gi|195134048|ref|XP_002011450.1| GI14037 [Drosophila mojavensis]
gi|193912073|gb|EDW10940.1| GI14037 [Drosophila mojavensis]
Length = 1027
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 291/574 (50%), Gaps = 48/574 (8%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E V +AF+ A+ RINK+ K L P+ L +++V DS T K +C
Sbjct: 12 IRVGAIFTEDEREGSVESAFKYAIYRINKE-KILLPNTQLVYDIEYVPRDDSFRTTKKVC 70
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ AIFGP + ++S+C+ FDIPH+EA D K F +N+YP
Sbjct: 71 RQLEAGVQAIFGPSDPLLASHVQSICEAFDIPHIEARIDLEVSVKEF-------SINLYP 123
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
++++ ++ ++W IIYE L Q ++ ++ + R + IRQ
Sbjct: 124 SQNIMNLAYRDLMMYLNWTKVAIIYEEDYGLFKQQDLIHSSAE-------MRTEMYIRQA 176
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P+T YR +L+ I+ I++D + + ++ M D++ + + T +
Sbjct: 177 NPET--YRQVLRAIRQKEIYKIIVDTNPTNIKKFFRSILQLQ-MNDHRYHYMFTT---FD 230
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ NIT R+++ + + I++ + + G L ++ E+AL
Sbjct: 231 LETYDLEDFRYNSVNITAFRLVDVGSKRYQDIIDQ-MQKLQHSGLDLINGVPYIQTESAL 289
Query: 296 MYDAVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
M+D+VY FA L+ L L LSC + W GL + N + S +DG+TG++N
Sbjct: 290 MFDSVYAFAHGLKQLDSSHTLTFKNLSCNSDRVWSDGLSLYNYINSAAVDGLTGKVNFIE 349
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
GRRN F ++ ++ + + +G W G+N S D I N TL V ++
Sbjct: 350 --GRRNKFKIDILKLKQEVIQKVGFWQPDVGVNISDPTAFYD----SNIANITLIVMTR- 402
Query: 415 FAKLRVLFQGEPYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ PY+M + G+ +DL+K IA ++ F YK L +N YG
Sbjct: 403 --------EERPYVMVKEDANITGNARFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVY 454
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 455 IPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTR 514
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 515 LFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 548
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + SVFVK+ ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 804 RDSKIGIYQKMWRYMENRKTSVFVKTYEDGIKRVME--GNYAFLMESTMLDYAVQRDCNL 861
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 862 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 895
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA I+YG +E GS
Sbjct: 739 ATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMITPIESAADLADQTEIQYGTLEGGS 798
Query: 815 TRNFFK 820
T FF+
Sbjct: 799 TMTFFR 804
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPET-----GELYGY 686
+ +VG G I+ PT+ + + + + + + PY+M + G+
Sbjct: 367 IQKVGFWQPDVGVNISDPTAFYDSNIA-NITLIVMTREERPYVMVKEDANITGNARFEGF 425
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 426 CIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 471
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSR 567
T F+ G + + + Q FSF+ PL+ ++W Y+A Y+ VS+ ++ +AR+S
Sbjct: 579 TGTFLRQGSGLNPKISDRAQTKFFSFMNPLAIEIWFYIAFGYILVSMCIWIVARLSPMEW 638
Query: 568 LR 569
+R
Sbjct: 639 VR 640
>gi|195402159|ref|XP_002059674.1| GJ12536 [Drosophila virilis]
gi|194155888|gb|EDW71072.1| GJ12536 [Drosophila virilis]
Length = 1072
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/574 (30%), Positives = 292/574 (50%), Gaps = 48/574 (8%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RINK+ K+L P+ L +++V DS T K +C
Sbjct: 36 IRVGAIFTEDEREGNIESAFKYAIYRINKE-KSLLPNTQLVYDIEYVPRDDSFRTTKKVC 94
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ AIFGP ++S+C+ FDIPH+E D K F +N+YP
Sbjct: 95 RQLEAGVQAIFGPTDPLLAAHVQSICEAFDIPHIEVRIDLEISVKEF-------SINLYP 147
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
++++ ++ ++W IIYE L Q ++ ++ + R + IRQ
Sbjct: 148 SQNIMNLAYRDLMMYLNWTKVAIIYEEDYGLFKQQDLIHSSAE-------MRTEMYIRQA 200
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
P+T YR +L+ I+ I++D + T + ++ M D++ + + T +
Sbjct: 201 NPET--YRQVLRAIRQKEIYKIIVDTNPTNIKTFFRSILQLQ-MNDHRYHYMFTT---FD 254
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ NIT R+++ + + +++ + + G + ++ E+AL
Sbjct: 255 LETFDLEDFRYNSVNITAFRLVDVGSKRYQEVIDQ-MQKLQHSGLDMINGMPYIQTESAL 313
Query: 296 MYDAVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
M+D+VY FA L+ L L LSC + W GL + N + S +DG+TGR+N
Sbjct: 314 MFDSVYAFAYGLKHLDSSHTLTFRNLSCNSDRVWSDGLSLYNYINSAAVDGLTGRVNFIE 373
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
GRRN F ++ ++ + + +G W G+N S D I N TL V ++
Sbjct: 374 --GRRNKFKIDILKLKQEIIQKVGYWQPDVGVNISDPTAFYD----SNIANITLVVMTR- 426
Query: 415 FAKLRVLFQGEPYMMKNPET-----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ PY+M + + G+ +DL+K IA ++ F YK L +N YG
Sbjct: 427 --------EERPYVMVKEDANLTGNAKFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVY 478
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 479 IPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTR 538
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 539 LFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 572
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + SVFVKS ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 849 RDSKIGIYQKMWRYMENRKASVFVKSYEDGIKRVME--GNYAFLMESTMLDYAVQRDCNL 906
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 907 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 940
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 47/67 (70%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA I YG +E G
Sbjct: 783 RATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMITPIESAADLADQTEISYGTLEGG 842
Query: 814 STRNFFK 820
ST FF+
Sbjct: 843 STMTFFR 849
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPET-----GELYGY 686
+ +VG G I+ PT+ + + + + + + PY+M + + G+
Sbjct: 391 IQKVGYWQPDVGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDANLTGNAKFEGF 449
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 450 CIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 495
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSR 567
T F+ G + + + Q FSF+ PL+ ++W Y+A Y+ VS ++ +AR+S
Sbjct: 603 TGTFLRQGSGLNPKISDRAQTKFFSFMNPLAIEIWFYIAFGYILVSFCIWIVARLSPMEW 662
Query: 568 LR 569
+R
Sbjct: 663 VR 664
>gi|189234772|ref|XP_974901.2| PREDICTED: similar to ionotropic glutamate receptor subunit ia
[Tribolium castaneum]
Length = 840
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 290/565 (51%), Gaps = 41/565 (7%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAI 68
P E AF +A IN +K I L P ++NY++ T C +G+ AI
Sbjct: 4 PRHETEQKAFHLATDLINAKYK--DSSIRLIPDSHLIDNYNAYTTYLTTCELLQKGVIAI 61
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP SI + I+++ +IPHVE ++D + +N++P ++S+ I+
Sbjct: 62 FGPSSIHSSPAIQTILDRKEIPHVETYFDRKL----SRHDCLLNLHPHPSVMSQAYLEIV 117
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT-DDYRPLLK 187
N W + +IY++ ++L L + + VT+ +L D D +R L
Sbjct: 118 NKWGWRSLVVIYDSEESLAKLGLFAASC----------KQRVTLSRLELDMYDTFRTSLT 167
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
IK + E++ +L+CS+D +LKQA++V +M + +YI++ ++ T+D FQ
Sbjct: 168 SIKKTGETNFILECSVDILEAVLKQAQQVGMMTERHSYIITK----LDLQTIDLAPFQYS 223
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
ANIT R+ NP N I S+ + +E +G ++ + AL+ D+V L A+
Sbjct: 224 EANITGFRIFNPENAEIMSLADQIYTQEKYKGIP---SGWLLRHQTALLIDSVDLLHQAV 280
Query: 308 Q--SLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
+L E+ + + L C ++W G I N MK TI G+TG ++ D++ G R F+L
Sbjct: 281 LDLTLSEQVVIQSQTLYCNTSNNWDSGHTIVNYMKGQTIKGLTGVVHFDNE-GFRRDFTL 339
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
+ +E +G W+ GL+ +R + K + +++ L +KTF + L
Sbjct: 340 DILELSLGGLLRIGAWSFFSGLSLNRPP---NLSKVKIVDDANLV--NKTFTVITCL--T 392
Query: 425 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
PY M T +L+G + +DL+ ++ L F Y +++ + G N TG+WNG
Sbjct: 393 TPYGMLKETTQQLFGNDRFEGFGIDLMDELSKMLGFNYTIIIQEDGYNGNYNQTTGEWNG 452
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
LIG + +ADLAI DLT+T+ER A VDFT+ FM LGISILY+KP P LF F+ P S
Sbjct: 453 LIGAILSGKADLAIADLTVTAEREAVVDFTLQFMNLGISILYKKPKPVPPSLFMFVSPFS 512
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+ VW+ + Y VS+ F + R+S
Sbjct: 513 YTVWILLVVTYFLVSMCFFVMGRLS 537
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
+STR AG+WWFFTLIM+SSYTANLAAFLT + P NV++L++ IKYG G+
Sbjct: 582 GISTRTGAGVWWFFTLIMVSSYTANLAAFLTVETLVTPFSNVKELSEQTEIKYGAKRGGA 641
Query: 815 TRNFFK 820
T NFFK
Sbjct: 642 TANFFK 647
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 559 LARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVF----------VKSNKEGVERVVK 608
+ +S + ++Y AK + ++ +S R ++ +SN EGVER
Sbjct: 623 VKELSEQTEIKYGAKRGGATANFFKNAGNDSVRSRIWHFMATHDEEMTESNDEGVERT-- 680
Query: 609 EKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAM 648
E+ YAFFMEST IEY +E++C L VG LD KGY IAM
Sbjct: 681 EEKHYAFFMESTTIEYVIERHCSLASVGAPLDDKGYAIAM 720
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M T +L+G + +DL+ ++ L F Y +++ + G N TG+WNGL
Sbjct: 394 PYGMLKETTQQLFGNDRFEGFGIDLMDELSKMLGFNYTIIIQEDGYNGNYNQTTGEWNGL 453
Query: 726 IGEL 729
IG +
Sbjct: 454 IGAI 457
>gi|242022297|ref|XP_002431577.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
gi|212516880|gb|EEB18839.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
Length = 938
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 302/567 (53%), Gaps = 42/567 (7%)
Query: 5 GIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATS 62
IF +++E +T AF+ AV +INK+ K P+ L +Q+V DS T+K C
Sbjct: 32 AIFTEDQKETSTELAFKYAVYKINKN-KNFLPNTTLVYDIQYVPRDDSFRTSKKACRQLE 90
Query: 63 EGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISK 122
GI AIFGP I+S+C+ D+PH+EA D F P +N++P ++K
Sbjct: 91 NGIQAIFGPTDPLLGAHIQSICEALDVPHMEARLD----FEPFLKEFSINLHPSQQHLNK 146
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
++ ++W IIYE L LQ ++++ + E+ IRQ P T Y
Sbjct: 147 AFQDLMIFLNWTKVAIIYEEDYGLFKLQDLVKSPPNSKMEMY-------IRQANPTT--Y 197
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQ 242
R +LKEI+ +L+D + T + ++ M DY+ + + T + T D +
Sbjct: 198 RHVLKEIRQKEIYKLLVDTNPVHTNVFFRAILQLQ-MNDYRYHYMFTT---FDIETFDLE 253
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYL 302
DF+ NIT R+++ + ++ +++ + + G+++ + +++E ALMYDAV++
Sbjct: 254 DFKYNSVNITAFRLVDVEDANVYNVLQQ-MEKFQPVGQAILNSSGIIQVEPALMYDAVHV 312
Query: 303 FAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNS 361
FA+ L ++ + + P LSC+ W++G + N + S+ I+G+TGR+ + G+R++
Sbjct: 313 FASGLSAMDKSYSVKPANLSCDLEKPWENGANLFNFINSVYINGLTGRVEF--KEGKRSN 370
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
F L+ ++ ++ + +G WN G+N + + + N TL V ++
Sbjct: 371 FKLDLLKLKKEKLQKVGQWNPFSGIN----ITDPNAFYETNTNNITLVVMTR-------- 418
Query: 422 FQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
+ PY+M + G+ +DL++ I+ ++ F Y+ L ++ YG L+ +T +W
Sbjct: 419 -EERPYVMVRHDKNLTGNARFEGFCIDLLRWISGQVGFNYEIRLVPDHKYGVLDQETKQW 477
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEP 536
NG++ EL ++RADLA+ +TI R + +DFT PFM LGI IL++ P + LFSF+ P
Sbjct: 478 NGIVRELMDKRADLAVASITINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNP 537
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARIS 563
L+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 538 LAVEIWIYVLAAYILVSFTLFVMARFS 564
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP + + I E Q V
Sbjct: 536 NPLAVEIWIYVLAAYILVSFTL-----FVMARFSPYEWHNPHPCQTDSDIIENQFSVSNS 590
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+N
Sbjct: 591 FWFITGTFLRQGSGLNPKAASTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENA 650
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ I YG +E GST FF+
Sbjct: 651 ADLAEQTEISYGTLEGGSTMTFFR 674
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M MES +PSVFV S EGV+RV+ G YAF MEST ++Y V+++C+L
Sbjct: 674 RDSKIGIYQKMWRFMESKKPSVFVPSYDEGVKRVLD--GNYAFLMESTMLDYVVQRDCNL 731
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGLLDSKGYGIA P
Sbjct: 732 TQIGGLLDSKGYGIATP 748
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 33/48 (68%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
G+ +DL++ I+ ++ F Y+ L ++ YG L+ +T +WNG++ EL ++
Sbjct: 440 GFCIDLLRWISGQVGFNYEIRLVPDHKYGVLDQETKQWNGIVRELMDK 487
>gi|321465253|gb|EFX76255.1| hypothetical protein DAPPUDRAFT_55220 [Daphnia pulex]
Length = 912
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 283/553 (51%), Gaps = 40/553 (7%)
Query: 18 FEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENR 77
F+ AV RIN+D + LP ++ I +V+ DS H +K C +G AIFGP
Sbjct: 47 FKYAVERINRDPELLPNTTLIYDI-HYVDREDSWHASKKACLQVQQGAHAIFGPSDPYLG 105
Query: 78 NIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFT 137
++S+C +IPH+EA D + + P + +NVYP +I+K ++ ++W
Sbjct: 106 AHVQSICDALEIPHLEARLDMDSEYKP----YSINVYPPIDIINKAFMDVMFFLNWTKVA 161
Query: 138 IIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHI 197
IIYE LV LQ ++ EI +RQ PDT Y+ +LKE+K ++
Sbjct: 162 IIYEEDQGLVMLQDMIRAPMAKPMEI-------LLRQASPDT--YKDVLKEVKAKEFYNL 212
Query: 198 LLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMI 257
++D + LK ++ M DY+ + L T + D + F+ Y NIT R +
Sbjct: 213 VIDTRPENMNFFLKGVLQLQ-MNDYKYHYLFTT---FDVEIFDLEAFKYNYVNITAFRAV 268
Query: 258 NPTNPHIRSIMNGWIYEENER----GRSLNV--RAETVKIEAALMYDAVYLFAAALQSLG 311
+ + + +E ER G + +V R ++IE AL YD+V++FA LQ+L
Sbjct: 269 DSEYFRVMQTL-----KEMERVQMPGYNTSVINRTRILQIEPALFYDSVHVFAHGLQALD 323
Query: 312 ERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYV 370
L +SC++ W G + N + ++ G+TG + + GRR +F + ++
Sbjct: 324 RSSSLRLANMSCDDEVPWSDGSSLFNYINAVEYRGLTGPVQF--REGRRTNFKFDLLKLK 381
Query: 371 SDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMK 430
S +G W G+N + V D N TL VT+ +L G Y +
Sbjct: 382 SHALLKVGEWTPRTGVNLTDPVAFFDAGTM----NVTLVVTTNLEVPYVLLASG--YNLT 435
Query: 431 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADL 490
+ E E G+ V+LIK IA+ + F Y L E YG +P+TG+WNG++ EL +++ADL
Sbjct: 436 DNERYE--GFCVELIKEIAHLVGFNYTIRLAPEAKYGISDPKTGEWNGIVRELMDRKADL 493
Query: 491 AICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYL 550
AI +TI R + +DFT PFM LGISI+++ P K LFSF++PL+ D+W+Y+ AY
Sbjct: 494 AIGSMTINYARESVIDFTKPFMNLGISIMFKVPTKPPARLFSFMKPLTLDIWLYVLVAYA 553
Query: 551 GVSLLLFFLARIS 563
VS+ +F ++R S
Sbjct: 554 LVSITMFLVSRFS 566
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + YQ+M ME+ +PSVFV + EG+ RV+ G YAF MEST
Sbjct: 666 LESGSTMTF-FRDSKIETYQKMWRFMENKKPSVFVSTYDEGIRRVLD--GNYAFLMESTT 722
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR---VLFQGEPYMMKN 677
++Y V +NC+L Q+GGLLDSK YGIA P S + + S +L+ V++Q KN
Sbjct: 723 LDYFVHRNCNLTQIGGLLDSKYYGIATPIGSPWRDRISLAILELQEKGVIYQLYSKWWKN 782
Query: 678 PE 679
E
Sbjct: 783 KE 784
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STR+V +WWFFTLI+ISSYTANLAAFLT RM PI++ +DLA+ I YG +E G
Sbjct: 610 KAASTRIVGSIWWFFTLIIISSYTANLAAFLTVERMASPIESAQDLAEQREISYGTLESG 669
Query: 814 STRNFFK 820
ST FF+
Sbjct: 670 STMTFFR 676
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
G+ V+LIK IA+ + F Y L E YG +P+TG+WNG++ EL ++
Sbjct: 442 GFCVELIKEIAHLVGFNYTIRLAPEAKYGISDPKTGEWNGIVRELMDR 489
>gi|194207686|ref|XP_001916673.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Equus
caballus]
Length = 970
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 250/460 (54%), Gaps = 47/460 (10%)
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLPP 177
+S I + + W + T++Y+ L+ LQ+++ + P R ++ IRQLP
Sbjct: 210 LSHAILDLAQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIRQLPL 260
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I + ++ +
Sbjct: 261 DSDDSRPLLKEMKRGREFRIIFDCSHAMAAQILKQAMAMGMMTEYYHFIFTT----LDLY 316
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET------VKI 291
+D + ++ N+T R++N +PH+ +I+ W E + RAE+ +
Sbjct: 317 ALDLEPYRYSGVNLTGFRILNVDSPHVSAIVEKWSMERLQAA----PRAESGLLDGVMMT 372
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+AAL+YDAV++ + Q R P T L C +W+ G N +K +G+TGR
Sbjct: 373 DAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGR 428
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I + +G R F L+ + D + +G W+ + GLN + + + + NR+L
Sbjct: 429 IVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPSEGLNITEVAKGRGPNVTDSLTNRSLI 488
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
VT+ VL EP++M L+G Y +DL+K +A+ L F+Y+ L +
Sbjct: 489 VTT-------VL--EEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVED 539
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG + + G+WNG+I EL + +ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP
Sbjct: 540 GKYGAQDDK-GQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKP 598
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 599 NGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 638
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 682 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 741
Query: 814 STRNFFK 820
+T FFK
Sbjct: 742 ATMTFFK 748
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 748 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 804
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGL+DSKGYGI P
Sbjct: 805 TQIGGLIDSKGYGIGTP 821
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M L+G Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 495 EPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 553
Query: 725 LIGEL 729
+I EL
Sbjct: 554 MIKEL 558
>gi|307185253|gb|EFN71372.1| Glutamate receptor, ionotropic kainate 2 [Camponotus floridanus]
Length = 968
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 303/579 (52%), Gaps = 53/579 (9%)
Query: 5 GIFGPNEEEVATA---FEIAVRRINKDFKALPPDIILEPIVQHVENYDS----LHTAKLM 57
+F NE EV+ F+++V+ IN+ + + L + VE ++ +K +
Sbjct: 87 ALFDENETEVSYVMRMFKLSVQAINEQ-RCGNEECHLSNVSLEVETGEAATELFEISKTV 145
Query: 58 CN-ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
C +S I IFGPQ I+S+C D+PH+ D ++ P + +N YP
Sbjct: 146 CTMVSSYKIVGIFGPQEKMATEYIQSICDTIDMPHISVRQDSSES--PQHRGLSLNFYPH 203
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+S+ ++ + W +F I+YE D+L+ + ++ K P S + L
Sbjct: 204 VSSLSRIYDQLVTEFKWKSFAILYENTDSLIRMHLLM-------KRWDPHGNSAFMYHLG 256
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ YR ++EIK S +I++DCS +LKQA++V ++ + Y + +TS ++
Sbjct: 257 CGPN-YREAMQEIKASGIENIIIDCSYKILSEVLKQAQQVGILS--EKYKVIVTS--LDL 311
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
T+D + +Q N T +R+I+P +P ++ ++ + +NE G +T E ALM
Sbjct: 312 QTLDLEPYQYSGVNFTGLRLIDPEDPIVQQTLDEY---KNEWGLDDPWELQT---EPALM 365
Query: 297 YDAVYLFAAALQSL-----GERKPLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YDAV LFA A + L G+ K LP + N + W+HGL + N M+S I G+TG +
Sbjct: 366 YDAVQLFATAFKQLKDAVKGDVKTLPCDGNFYNDTVRWEHGLSLINFMRSSEIRGLTGLV 425
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D + G R++ L+ V + +G WN+ G N+ + +++ K+ +E L++
Sbjct: 426 KFD-KDGVRSNIQLDVVRLTENGLTKIGVWNSTAG-NNINWIPEINT-KRTDVE---LSL 479
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLEREN 464
+KTF L L PY M+ + L G + +D+I I+ L F Y L+ E+
Sbjct: 480 QNKTFIVLIAL--TAPYGMETQSSTTLSGNERYEGFGIDIIDRISQILGFNY--TLQVES 535
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
GT + GKW+G++G++ ADLAI DLTIT+ER AVDFT PFM LGISILYRKP
Sbjct: 536 NTGT--KKNGKWSGMLGKIINDEADLAIADLTITAEREEAVDFTNPFMNLGISILYRKPT 593
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K P L SFL P S DVW Y+ A + VSLLLF + R+
Sbjct: 594 KAPPSLLSFLSPFSNDVWSYLIGACVIVSLLLFIIGRLC 632
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 63/118 (53%), Gaps = 12/118 (10%)
Query: 713 GTLNPQTGKWNG---LIGELQEQVDTFIL-----FFIYSILFFIYTFVNEAVSTRLVAGM 764
G L P +WN I E +E + F F I SI+ +STR++A
Sbjct: 629 GRLCP--AEWNNPYPCIEEAEELENQFTFKNAFWFVIGSIMQQGSEIAPIGISTRMMASC 686
Query: 765 WWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGR--IKYGCVEMGSTRNFFK 820
WWFF LIM+SSYTANLAAFLT + P NVE+LAK G I YG G+T FF+
Sbjct: 687 WWFFCLIMVSSYTANLAAFLTVETVVNPFNNVEELAKQGGEPIMYGAKYEGATFKFFR 744
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S+ Y++M+ M ++ V +SN G+++V + YAF MES+ IEY +E+ C++
Sbjct: 744 RDSDYPTYRKMYEYMMANEKEVLPRSNDIGLQQVKTQN--YAFLMESSSIEYTIERECNM 801
Query: 633 MQVGGLLDSKGYGIAM 648
Q+GGLLD KGYGIA+
Sbjct: 802 TQIGGLLDEKGYGIAI 817
>gi|355745147|gb|EHH49772.1| hypothetical protein EGM_00487 [Macaca fascicularis]
Length = 967
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 185/630 (29%), Positives = 287/630 (45%), Gaps = 151/630 (23%)
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYP 115
L C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+YP
Sbjct: 35 LACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNLYP 92
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TIR 173
+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++ IR
Sbjct: 93 DYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLKIR 143
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYI------- 226
QLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I
Sbjct: 144 QLPVDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLMRV 203
Query: 227 --------------LSLTSYWINA--------------HTVDFQDFQPGYANITTVRMIN 258
LS Y +N + +D + ++ N+T R++N
Sbjct: 204 NQVMEALGSLKLWHLSSLRYQVNTELEKRLNAMRGKDLYALDLEPYRYSGVNLTGFRILN 263
Query: 259 PTNPHIRSIMNGWIYEENERGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGE 312
NPH+ +I+ W E + RAE+ + +AAL+YDAV++ + Q
Sbjct: 264 VDNPHVSAIVEKWSMERLQAAP----RAESGLLDGVMMTDAALLYDAVHIVSVCYQ---- 315
Query: 313 RKPLPT--PLSCENPSSWQ-------------------HGLGIGNLMKSITID------- 344
R P T L C +W+ H G + + ID
Sbjct: 316 RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEDLTWAPPSHDFRAGTHLSASKIDVVHEKAQ 375
Query: 345 --GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEK 402
G+TGRI + +G R F L+ + D + +G W+ A GLN + + +
Sbjct: 376 WEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 435
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTY 456
+ NR+L VT+ VL EP++M LY GY +DL+K +A+ L F+Y
Sbjct: 436 LTNRSLIVTT-------VL--EEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSY 486
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGELQE------------------------------- 485
+ L + YG + + G+WNG++ EL +
Sbjct: 487 EIRLVEDGKYGAQDDK-GQWNGMVKELIDHGCGEFEPTEVEPGGDINLALEEGHSAAGLN 545
Query: 486 ------------QRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
++ADLA+ LTIT R A+DF+ PFMTLG+SILYRKP P +FSF
Sbjct: 546 LSQYEGHCWDLSRKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSF 605
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 606 LNPLSPDIWMYVLLAYLGVSCVLFVIARFS 635
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 679 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 738
Query: 814 STRNFFK 820
+T FFK
Sbjct: 739 ATMTFFK 745
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 745 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRALT--ADYALLMESTTIEYVTQRNCNL 801
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 802 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 835
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 449 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 507
Query: 725 LIGEL 729
++ EL
Sbjct: 508 MVKEL 512
>gi|405952258|gb|EKC20092.1| Glutamate receptor, ionotropic kainate 2 [Crassostrea gigas]
Length = 1604
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 182/571 (31%), Positives = 291/571 (50%), Gaps = 56/571 (9%)
Query: 16 TAFEIAVRR-INKDFKAL---PPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGP 71
TA E+A + +NK ++L ++ +E V DS + +C S G IFG
Sbjct: 12 TALELAFKETMNKAQQSLLYGNKNLKIEDFFSRVNLEDSYEVSGEVCKVISFGSEVIFGT 71
Query: 72 QSIENRNIIESMCQMFDIPHVEAFWDPNKYFI----PTNGVHGVNVYPESHLISKGISVI 127
S + + S+C IP+++ WD + P +N+YP+ H +S +
Sbjct: 72 HSRSSSEYVTSLCNQLSIPNLQIHWDSREVVTSTKRPDRDHMTLNLYPDHHTLSAAQRDL 131
Query: 128 INDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ---LPPDTDDYRP 184
I DW F ++YE +D L+ LQ +L+ + GR ++T R+ L P++ +
Sbjct: 132 IKFWDWKKFAVLYEDNDGLIRLQSILKLSFK-------GRVAITTRKINFLNPES--VKN 182
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
+LK++KN+ I++DC D+ ILK+A E + +Y +Y ++ D +F
Sbjct: 183 VLKDLKNTEHQRIIVDCHYDRVHDILKEAAETEALSEYFHYHFMT----LDLGVTDISEF 238
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEE-NERGRSLNVRAETVKI--EAALMYDAVY 301
ANIT +R++NP + ++++ W + N RG +R ++I E ALM+DAV+
Sbjct: 239 SEYGANITALRLVNPEHGAVKNLTEEWKQLQFNIRGNRSPLRKGQLQIPTETALMHDAVW 298
Query: 302 LFAAALQSLGERKPLP----TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
+ A +L E P + SC+ + W+ G + MKS+ +DG++G I Q G
Sbjct: 299 VLTEAALALNEANPTALASYSRASCDKAAPWEFGADLLGYMKSVNVDGLSGTIQF-GQYG 357
Query: 358 RRNSFSLEFVEYVSDQWKV--LGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
+R +F LE V++ + KV +GTWN+ LN + +N +L+ +KT
Sbjct: 358 QRENFELEVVKFSHEFKKVQKIGTWNSLSFLNITD-------------DNESLSQLNKTL 404
Query: 416 AKLRVLFQGEPYMMKN-PETGELY--GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ 472
L VL PY K E G + G+ +D++ IA + F Y+ ++ E TYG N
Sbjct: 405 KVLTVLEM--PYAGKKIDEYGNVKYEGFCIDILDYIAESMKFKYE--IQEEPTYG--NCD 458
Query: 473 TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFS 532
+ G+ +L ++ ADLA+ +TITS R VDFT PF LGI+IL+RKP K LFS
Sbjct: 459 EKECTGMYQKLIDREADLAVAGITITSAREKFVDFTKPFWNLGITILFRKPKAKPVRLFS 518
Query: 533 FLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FL+P DVWVYM YL VS + F +AR++
Sbjct: 519 FLDPFHEDVWVYMIAIYLCVSFMFFVIARLT 549
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 159/336 (47%), Gaps = 58/336 (17%)
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNV--RAET-VKIEAAL 295
VDF F ANIT +RM++ NP ++++ W + SL+ R +T V I AAL
Sbjct: 942 VDFSPFMYSGANITGMRMVDLENPKAIAVVDRWKKDLERSSFSLSPIGRDQTQVSIGAAL 1001
Query: 296 MYDAVYLFAAALQSLGERK--PLPTPLSCE---NPSSWQHGLGIGNLMKSITIDGMTGRI 350
MYDA+ + AL L + +SC+ N W +G + N +K+I
Sbjct: 1002 MYDAIKVLYRALDLLTTMRNVDFKRKISCDEGYNSLPWFNGKALVNALKTI--------- 1052
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
G W+ G+ + E + ++ + N+TL+V
Sbjct: 1053 ---------------------------GRWHFRRGVKITDKSEFLSDDRGNVLTNKTLSV 1085
Query: 411 TSKTFAKLRVLFQGEPYMMKNPE---TGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
+ A PY + E T + G+ +DL+ +A+ L F Y E TYG
Sbjct: 1086 VTVLEA---------PYAFRVTEGNGTAQYEGFCIDLLNSVADILGFKYNITPEPSGTYG 1136
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ + +G++ +L E++ADLA+ +TIT R +DFT PF LGI+IL+RKP
Sbjct: 1137 NCDGE--HCDGMVKQLVERKADLAVAGMTITYSREEVIDFTKPFWNLGITILFRKPMAPP 1194
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+LF FL P + ++W Y+ Y+ VS+++F +AR++
Sbjct: 1195 AELFKFLSPFTSELWAYVLAVYIVVSVMMFVIARLT 1230
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 615 FFMESTGIEYEVEK-----NCDLMQVGGL----------LDSKGYGIAMPTSKFLAKFSF 659
+ ES +YE+++ NCD + G+ L G I KF+ F+
Sbjct: 437 YIAESMKFKYEIQEEPTYGNCDEKECTGMYQKLIDREADLAVAGITITSAREKFV-DFTK 495
Query: 660 GFAKLRVLFQGEPYMMKNPETGELYGYSV------DL-IKMIANELNFTYKF-VLERENT 711
F L G + + P+ + +S D+ + MIA L ++ F V+ R
Sbjct: 496 PFWNL-----GITILFRKPKAKPVRLFSFLDPFHEDVWVYMIAIYLCVSFMFFVIARLTP 550
Query: 712 YGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLI 771
Y NP I E Q V + I SIL VSTR+VAG+WWFFTLI
Sbjct: 551 YEWCNPYPCNQEEDIVENQFSVLNSMWLTIGSILQQGCELAPRTVSTRMVAGVWWFFTLI 610
Query: 772 MISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+ISSYTANLAAFLT RM PI++ EDL+K IKYG ++ GST +FF+
Sbjct: 611 IISSYTANLAAFLTAGRMQSPIESAEDLSKQTDIKYGTLQTGSTYSFFQ 659
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 670 GEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
E + +P T EL+ Y + + +++ FV+ R Y NP + E
Sbjct: 1195 AELFKFLSPFTSELWAYVLAVYIVVS-----VMMFVIARLTPYEWDNPYPCDVHNEALEN 1249
Query: 730 QEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRM 789
Q + + F I +++ + STRLVAG+WWFFTLIMISSYTAN+AAFLT RM
Sbjct: 1250 QFGIMNSLWFTIGALMQQGSEISPKTTSTRLVAGVWWFFTLIMISSYTANMAAFLTIERM 1309
Query: 790 NPPIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
PI + EDL+ IKYG +E GSTR FF
Sbjct: 1310 ENPIGSAEDLSNQNEIKYGTLESGSTRAFF 1339
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+NS +YQRM + M++ P VFVK++ EG +RV++ G YA+F EST +EY+VE+NCDL
Sbjct: 659 QNSIFPIYQRMFTFMKNQNPPVFVKNSNEGEKRVLQ--GDYAYFAESTTVEYKVERNCDL 716
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+G L+S GYGIA+P
Sbjct: 717 TQIGNWLNSVGYGIALP 733
>gi|195469433|ref|XP_002099642.1| GE14568 [Drosophila yakuba]
gi|194185743|gb|EDW99354.1| GE14568 [Drosophila yakuba]
Length = 1074
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 290/576 (50%), Gaps = 53/576 (9%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RINK+ K L P+ L +++V DS T K +C
Sbjct: 42 IRVGAIFTDDERESSIESAFKYAIYRINKE-KNLLPNTQLVYDIEYVPRDDSFRTTKKVC 100
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD---PNKYFIPTNGVHGVNVYP 115
+ G+ AIFGP + ++S+C+ +DIPH+E D +K F +N+YP
Sbjct: 101 SQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEF-------SINLYP 153
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE L L A + + IRQ
Sbjct: 154 SHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLMHSSTEA----------KAEMYIRQA 203
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L+ I+ I++D + T + ++ M D++ + + T +
Sbjct: 204 SPDS--YRQVLRAIRQKEIYKIIVDTNPSHIKTFFRSILQLQ-MNDHRYHYMFTT---FD 257
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ NIT R+++ + ++N +N G + ++ E+AL
Sbjct: 258 LETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQNN-GLDIINGIPYIQTESAL 316
Query: 296 MYDAVYLFAAALQ--SLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
M+D+VY FA L L R+ L LSC + +W G+ + N + DG+TG +N
Sbjct: 317 MFDSVYAFATGLHFLHLDNRQNLYIKNLSCTSDQTWNDGISLYNQINGAITDGLTGNVNF 376
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
GRR+ F L+ ++ ++ + +G W G+N S D I N TL V +
Sbjct: 377 --VEGRRSIFKLDILKLKQEKIQKVGYWQPDGGVNISDPTAFYDS----NIANITLVVMT 430
Query: 413 KTFAKLRVLFQGEPYMMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYG 467
+ + PY+M + TG + G+ +DL+K IA ++ F YK L +N YG
Sbjct: 431 R---------EERPYVMVKEDQNLTGNIRFEGFCIDLLKAIATQVGFQYKIELVPDNMYG 481
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 482 VYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQP 541
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 542 TRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 577
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 67/94 (71%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + +VFVK+ ++G+ RV++ G YAF MEST ++Y V+++C+L
Sbjct: 852 RDSKIGIYQKMWRYMENRKTAVFVKTYEDGIRRVME--GSYAFLMESTMLDYAVQRDCNL 909
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 910 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 943
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA+ I YG +E GS
Sbjct: 787 ATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGS 846
Query: 815 TRNFFK 820
T FF+
Sbjct: 847 TMTFFR 852
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--GY 686
+ +VG G I+ PT+ + + + + + + PY+M + TG + G+
Sbjct: 396 IQKVGYWQPDGGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDQNLTGNIRFEGF 454
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 455 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 500
>gi|195355698|ref|XP_002044327.1| GM13027 [Drosophila sechellia]
gi|194130614|gb|EDW52657.1| GM13027 [Drosophila sechellia]
Length = 1072
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 291/576 (50%), Gaps = 53/576 (9%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RINK+ K+L P+ L +++V DS T K +C
Sbjct: 42 IRVGAIFTEDERESSIESAFKYAIYRINKE-KSLLPNTQLVYDIEYVPRDDSFRTTKKVC 100
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD---PNKYFIPTNGVHGVNVYP 115
+ G+ AIFGP + ++S+C+ +DIPH+E D +K F +N+YP
Sbjct: 101 SQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEYKSKEF-------SINLYP 153
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE L L + + IRQ
Sbjct: 154 SHTLLTLAYRDIMAYLNWTKVAIIYEEDYGLFNLMH----------STTETKAEMYIRQA 203
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L+ I+ I++D + + + ++ M D++ + + T +
Sbjct: 204 SPDS--YRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQ-MNDHRYHYMFTT---FD 257
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ NIT R+++ + ++N + + G ++ ++ E+AL
Sbjct: 258 LETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQ-MQKLQHNGLNIINGIPYIQTESAL 316
Query: 296 MYDAVYLFAAALQSLG---ERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
M+D+VY FA L L + LSC + +W G+ + N + + DG+TG ++
Sbjct: 317 MFDSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVHF 376
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
GRRN F L+ ++ ++ + +G W+ G+N S D I N TL V +
Sbjct: 377 --MEGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDS----NIANITLVVMT 430
Query: 413 KTFAKLRVLFQGEPYMMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYG 467
+ + PY+M + TG L G+ +DL+K IA ++ F YK L +N YG
Sbjct: 431 R---------EERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYG 481
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 482 VYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQP 541
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 542 TRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 577
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + +VFVK+ ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 850 RDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVIE--GSYAFLMESTMLDYAVQRDCNL 907
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 908 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 941
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA+ I YG +E GS
Sbjct: 785 ATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGS 844
Query: 815 TRNFFK 820
T FF+
Sbjct: 845 TMTFFR 850
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--GY 686
+ +VG G I+ PT+ + + + + + + PY+M + TG L G+
Sbjct: 396 IQKVGYWHPDDGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDKNLTGNLRFEGF 454
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 455 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 500
>gi|189235357|ref|XP_966711.2| PREDICTED: similar to CG11155 CG11155-PA [Tribolium castaneum]
Length = 999
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 300/569 (52%), Gaps = 46/569 (8%)
Query: 4 VGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
IF ++++ V AF+ AV +INKD + L + L +Q+V DS T+K +C
Sbjct: 27 CAIFTEDQKDSSVELAFKYAVYKINKD-RVLLSNTTLVYDIQYVPRDDSFRTSKKVCRQM 85
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
G+ AIFGP I+S+C+ D+PH+EA D F P + +N++P ++
Sbjct: 86 EFGVQAIFGPSDPILGAHIQSICEALDVPHLEARID----FEPLSKDLSINLHPSQEHMN 141
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
K ++ ++W IIYE L LQ+++ K R + IRQ P +
Sbjct: 142 KAFKDLMTFLNWTKVAIIYEEDYGLFKLQELV-------KAPAAARTEMYIRQAGPTS-- 192
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR +LKE++ +++D + + ++ M DY+ + + T + T D
Sbjct: 193 YRQVLKEVRQKEIYKLIVDTNPRNIQKFFRAILQLQ-MNDYRYHYMFTT---FDLETFDL 248
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER-GRSLNVRAETVKIEAALMYDAV 300
+DF+ NIT R+++ +P ++ + + E+ + G ++ ++ ++ E ALM+D+V
Sbjct: 249 EDFKYNSVNITAFRIVDVDDPQVKESLE--VMEKFQPIGHAILNKSGIIQAEPALMFDSV 306
Query: 301 YLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRN 360
Y+FA L ++G KP+ LSC+ W G + N + + G+TG I + G+R+
Sbjct: 307 YVFAKGLAAMGSIKPMN--LSCDVEKPWDDGSSLYNYLGDDDLRGLTGNIEFNG--GKRS 362
Query: 361 SFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRV 420
+F L+ ++ ++ + +G W + G+N + + + N TL V ++
Sbjct: 363 NFKLDLLKLKKEEIRKVGQWTPSGGVN----ITDPNAFYESHAPNITLVVMTR------- 411
Query: 421 LFQGEPYMMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
+ PY+M E TG G+ +DL+K IA ++ F Y L ++ YG +P T +
Sbjct: 412 --EERPYVMVKDEKNLTGNARYEGFCIDLLKWIAGQVGFQYTIRLVPDHMYGVYDPDTKE 469
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD-LFSFL 534
WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL+++ +K +P LFSFL
Sbjct: 470 WNGIVRELMEKRADLAVASMTINYARESVIDFTKPFMNLGIGILFKQSSKSEPSRLFSFL 529
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PL+ ++W+YMA AY+ VS+ ++ +AR S
Sbjct: 530 NPLAMNIWLYMAGAYVLVSITIWIVARFS 558
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 69/94 (73%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M MES +PSVFVK+ +EGV+RV++ G YAF MEST ++Y V+++C+L
Sbjct: 672 RDSKIGIYQKMWRFMESRKPSVFVKTYEEGVQRVLE--GNYAFLMESTMLDYAVQRDCNL 729
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 730 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 763
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ +DLA I YG +E G
Sbjct: 606 KATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIESAQDLADQTDIAYGTLEGG 665
Query: 814 STRNFFK 820
ST FF+
Sbjct: 666 STMTFFR 672
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 631 DLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--G 685
++ +VG S G I P + F + + + + PY+M E TG G
Sbjct: 375 EIRKVGQWTPSGGVNITDPNA-FYESHAPNITLVVMTREERPYVMVKDEKNLTGNARYEG 433
Query: 686 YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+ +DL+K IA ++ F Y L ++ YG +P T +WNG++ EL E+
Sbjct: 434 FCIDLLKWIAGQVGFQYTIRLVPDHMYGVYDPDTKEWNGIVRELMEK 480
>gi|405952257|gb|EKC20091.1| Glutamate receptor, ionotropic kainate 2, partial [Crassostrea
gigas]
Length = 896
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 301/558 (53%), Gaps = 39/558 (6%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ AV RIN + K L L + + D+ ++ +C+ + GI+ +FGP+S
Sbjct: 3 AFKYAVYRINHE-KNLLGGATLNYDTRRLSAEDAFTSSMDICDQITMGISTLFGPRSQHL 61
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTF 136
++MC IPH+E + + +G +N++P+S +++ +I+ +
Sbjct: 62 AAFTDTMCSHLHIPHIE-YRETTLAQTLLSGF-SINIHPKSDQLARAYIDLIDSYKMKSV 119
Query: 137 TIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESH 196
+IYE L+ +Q +L D V IRQ D+ + R +LKE K+ S ++
Sbjct: 120 LLIYEHQGGLLKMQNILHEVTKDMTR------QVFIRQ--GDSSNIREVLKEAKSKSWTN 171
Query: 197 ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRM 256
I++D ++ T +L+ A + ++ Y +YIL+ ++ ++ D++ Y N+T R+
Sbjct: 172 IIVDMNISNTAILLRTALQEGMIDPYHHYILTT----LDIEGINLYDYKYNYVNLTGFRL 227
Query: 257 INPTNPHIRSIMNGWIYEENERGRSL--NVRAETVKIEAALMYDAVYLFAAALQSLGERK 314
++P + + R I+ Y E + L + T+ E+AL++DAV LFA AL+ L K
Sbjct: 228 VDPNDEYTRDIIKEMYYYERDTELKLLYDKDYNTIPYESALVFDAVLLFAKALRDLSRDK 287
Query: 315 P-LPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
+ +SC+ W+ G + + ++ I G+TG I + GRR +FSL+ ++ +
Sbjct: 288 VYISANVSCDGEEVWRSGKDLYDYLQKSEIRGLTGDIRI--LKGRRQTFSLDVMQLTEEG 345
Query: 374 WKVLGTWN--TAFGLNHSRTVEQMDKEKKEKIE--NRTLTVTS---KTFAKLRVLFQGEP 426
+ +G+WN T G+N + + KE N+TL VT+ K + +R L EP
Sbjct: 346 LRKVGSWNSNTKTGINFTH------RYIKENFPFGNKTLVVTTVLDKPYVMIRDL---EP 396
Query: 427 YMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 485
+ ++ +LY G+ VDL++ +A + F YK V + YG L + GKWNG++ EL +
Sbjct: 397 GVDRSKLGNDLYEGFCVDLLREMAAIVGFEYKIVPVDDGLYGML--EDGKWNGIVRELID 454
Query: 486 QRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYM 545
++AD+A+ LTI+ R +DFT PF+ LGISIL++ P +K+P LFSFL PL+ ++WVY+
Sbjct: 455 RKADIAVAALTISYLREQYIDFTKPFLNLGISILFKTPERKKPGLFSFLNPLAVEIWVYV 514
Query: 546 ATAYLGVSLLLFFLARIS 563
AY+ VS +F LAR S
Sbjct: 515 IAAYMLVSFCIFVLARFS 532
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K+S + Y+RM M++ P+VFVK+ ++GVE+V+ G YA+ MEST IEYEV++NCDL
Sbjct: 642 KDSKIDTYRRMWHYMKTKEPTVFVKNARDGVEKVLA--GNYAYLMESTSIEYEVQQNCDL 699
Query: 633 MQVGGLLDSKGYGIAMP 649
MQVGGLLDSKG+G+A P
Sbjct: 700 MQVGGLLDSKGFGVATP 716
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+V WWFFTLI+ISSYTANLAAFLT RM PI++ E LA I YG +E GS
Sbjct: 577 AISTRIVGATWWFFTLIIISSYTANLAAFLTVERMISPIESAEQLAAQSSIAYGTLEGGS 636
Query: 815 TRNFFK 820
T FFK
Sbjct: 637 TMTFFK 642
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVL-FQGEPY-MMKNPETG-------- 681
L +VG + GI F FG L V +PY M+++ E G
Sbjct: 346 LRKVGSWNSNTKTGINFTHRYIKENFPFGNKTLVVTTVLDKPYVMIRDLEPGVDRSKLGN 405
Query: 682 ELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL-QEQVDTFILF 739
+LY G+ VDL++ +A + F YK V + YG L + GKWNG++ EL + D +
Sbjct: 406 DLYEGFCVDLLREMAAIVGFEYKIVPVDDGLYGML--EDGKWNGIVRELIDRKADIAVAA 463
Query: 740 FIYSILF-----FIYTFVNEAVST------RLVAGMWWFFTLIMISSYTANLAAFL 784
S L F F+N +S R G++ F + + + +AA++
Sbjct: 464 LTISYLREQYIDFTKPFLNLGISILFKTPERKKPGLFSFLNPLAVEIWVYVIAAYM 519
>gi|328777632|ref|XP_003249376.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Apis
mellifera]
Length = 1000
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 172/575 (29%), Positives = 292/575 (50%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF ++++ + AF+ A+ +INKD K L + L +Q+V DS T+K C
Sbjct: 22 IRIGAIFTEDQKDSPSELAFKYAIYKINKD-KTLLANTTLVYDIQYVPKDDSFRTSKKAC 80
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
S + IFGP I+S+C+ D+PH+EA D F PT +N+YP
Sbjct: 81 KQLSRSVQGIFGPSDPLLGAHIQSICEALDVPHLEARVD----FEPTFKEFSINLYPSQD 136
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
++K +++ ++W IIYE L LQ ++ K R + IRQ P
Sbjct: 137 HLNKAFKDLMSFLNWTRVAIIYEEDYGLFKLQDLV-------KSPPSARTEMYIRQAGPG 189
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ YR +L+E+++ +++D + ++ M DY+ + + T + T
Sbjct: 190 S--YRQVLREVRHKEIYKLIVDTDPAHMQQFFRAILQLQ-MNDYRYHYMFTT---FDIET 243
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER----GRSLNVRAETVKIEAA 294
D +DF+ N+T R+++ P + ++ + ER G ++ + ++ E A
Sbjct: 244 FDLEDFKYNSVNMTAFRLVDLEEPKVAEVL-----RQMERFQPIGHAILNKTGVIQAEPA 298
Query: 295 LMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
L+YD+V +FA L +L L P LSCE W GL + N + + + G+TG I +
Sbjct: 299 LVYDSVQVFAHGLAALDRSHDLRPANLSCEKEEPWDDGLSLYNYINAAGLHGLTGHIEFN 358
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
G+RN+F L+ ++ ++ +G W G+N V + + N TL V ++
Sbjct: 359 E--GKRNNFKLDLLKLKKEELVKVGEWKPGSGVN----VTDVGAFYETSATNITLVVMTR 412
Query: 414 TFAKLRVLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
+ +PY+M + G+ +DL+K IA+++ F Y L ++ YG
Sbjct: 413 ---------EEKPYVMVKEDKNLTGNARFEGFCIDLLKWIASQVGFQYAIRLVPDHMYGV 463
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T +WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P+ +
Sbjct: 464 YDPKTKEWNGIVRELMEKRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPT 523
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 524 RLFSFMNPLAVEIWLYVLAAYMLVSFTLFVMARFS 558
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +Y++M MES PSVFVKS ++GV+RV++ G YAF MEST ++Y V+++C+L
Sbjct: 668 RDSKIGIYKKMWEFMESKSPSVFVKSYEDGVKRVLE--GDYAFLMESTMLDYAVQRDCNL 725
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 726 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 759
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP I E Q V
Sbjct: 530 NPLAVEIWLYVLAAYMLVSFTL-----FVMARFSPYEWNNPHPCLGESDIVENQFSVSNS 584
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+N
Sbjct: 585 FWFITGTFLRQGSGLNPKATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENA 644
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ +I YG +E GST FF+
Sbjct: 645 ADLAEQTQISYGTLEGGSTMTFFR 668
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 671 EPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
+PY+M + G+ +DL+K IA+++ F Y L ++ YG +P+T +WNG+
Sbjct: 415 KPYVMVKEDKNLTGNARFEGFCIDLLKWIASQVGFQYAIRLVPDHMYGVYDPKTKEWNGI 474
Query: 726 IGELQEQ 732
+ EL E+
Sbjct: 475 VRELMEK 481
>gi|332020480|gb|EGI60895.1| Glutamate receptor, ionotropic kainate 2 [Acromyrmex echinatior]
Length = 982
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 281/553 (50%), Gaps = 39/553 (7%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ A+ +INKD K L + L +Q+V DS T+K C S + IFGP
Sbjct: 19 AFKYAIYKINKD-KTLLANTTLVYDIQYVPKDDSFRTSKKACKQLSRSVQGIFGPSDPLL 77
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTF 136
I+S+C+ D+PH+EA D F PT +N+YP ++ +I+ ++W
Sbjct: 78 GAHIQSICEALDVPHLEARVD----FEPTFKEFSINLYPAQDHLNTAFKDLISFLNWTRV 133
Query: 137 TIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESH 196
IIYE L LQ ++ K R + IRQ P + YR +L+E+++
Sbjct: 134 AIIYEEDYGLFKLQDLV-------KSPPSVRTEMYIRQAGPAS--YRQVLREVRHKEIFK 184
Query: 197 ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRM 256
+++D + ++ M DY+ + + T + T D +DF+ N+T R+
Sbjct: 185 LIVDTDPAHMQQFFRAILQLQ-MNDYRYHYMFTT---FDIETFDLEDFKYNSVNMTAFRL 240
Query: 257 INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPL 316
++ + I+ + G ++ + ++ E AL+YD+V +FA L +L L
Sbjct: 241 VDLEESKVAEILKQMERFQPAIGHAILNKTGVIQAEPALVYDSVQVFAHGLAALDRSHDL 300
Query: 317 -PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWK 375
P LSCE W GL + N + ++ + G+TG I + G+RN+F L+ ++ ++
Sbjct: 301 RPANLSCEKEEPWDDGLSLYNYINAVRLHGLTGHIEFNE--GKRNNFKLDLLKLKKEELV 358
Query: 376 VLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM----KN 431
+G W + G+N V +D + N TL V ++ + PY+M KN
Sbjct: 359 KVGEWKSGSGIN----VTDLDAFYETTTTNITLVVMTR---------EERPYVMVKENKN 405
Query: 432 -PETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADL 490
G+ +DL+K IAN++ F Y L ++ YG +P+T +WNG++ EL ++RADL
Sbjct: 406 LTGNARFEGFCIDLLKSIANQVGFQYAIKLVPDHMYGVYDPETKEWNGIVRELMDKRADL 465
Query: 491 AICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYL 550
A+ +TI R + +DFT PFM LGI IL++ P+ + LFSF+ PL+ ++W+Y+ AY+
Sbjct: 466 AVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPTRLFSFMNPLAVEIWLYVLAAYM 525
Query: 551 GVSLLLFFLARIS 563
VS LF +AR S
Sbjct: 526 LVSFTLFVMARFS 538
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP + E Q V
Sbjct: 510 NPLAVEIWLYVLAAYMLVSFTL-----FVMARFSPYEWNNPHPCVAESDVVENQFTVSNS 564
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+NV
Sbjct: 565 FWFITGTFLRQGSGLNPKATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENV 624
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ I YG +E GST+ FF+
Sbjct: 625 ADLAEQTEISYGTLEGGSTKTFFR 648
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M MES PSVFV++ +EGV+RV++ G YAF MEST ++Y V+++C+L
Sbjct: 648 RDSKIGIYQKMWRFMESKSPSVFVQTYEEGVKRVLE--GDYAFLMESTMLDYAVQRDCNL 705
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+GGLLDSKGYGIA P
Sbjct: 706 TQIGGLLDSKGYGIATP 722
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
G+ +DL+K IAN++ F Y L ++ YG +P+T +WNG++ EL ++
Sbjct: 414 GFCIDLLKSIANQVGFQYAIKLVPDHMYGVYDPETKEWNGIVRELMDK 461
>gi|340713406|ref|XP_003395234.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Bombus
terrestris]
Length = 998
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/575 (29%), Positives = 291/575 (50%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF ++++ + AF+ A+ +INKD K L + L +Q+V DS T+K C
Sbjct: 22 IRIGAIFTEDQKDSPSELAFKYAIYKINKD-KTLLANTTLVYDIQYVPKDDSFRTSKKAC 80
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
S + IFGP I+S+C+ D+PH+EA D F PT +N+YP
Sbjct: 81 KQLSRSVQGIFGPSDPLLGAHIQSICEALDVPHLEARVD----FEPTFKEFSINLYPSQD 136
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
++K +++ ++W IIYE L LQ ++ K R + IRQ P
Sbjct: 137 HLNKAFKDLMSFLNWTRVAIIYEEDYGLFKLQDLV-------KSPPSARTEMYIRQAGPG 189
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ YR +L+E+++ +++D + ++ M DY+ + + T + T
Sbjct: 190 S--YRQVLREVRHKEIYKLIVDTDPAHMQQFFRAILQLQ-MNDYRYHYMFTT---FDIET 243
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER----GRSLNVRAETVKIEAA 294
D +DF+ N+T R+++ P + ++ + ER G ++ + ++ E A
Sbjct: 244 FDLEDFKYNSVNMTAFRLVDLEEPKVAEVL-----RQMERFQPIGHAILNKTGVIQAEPA 298
Query: 295 LMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
L+YD+V +FA L +L L P LSCE W GL + N + + + G+TG I +
Sbjct: 299 LVYDSVQVFAHGLAALDRSHDLRPANLSCEKEEPWDDGLSLYNYINAAGLHGLTGHIEFN 358
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
G+RN+F L+ ++ ++ +G W G+N V + + N TL V ++
Sbjct: 359 E--GKRNNFKLDLLKLKKEELVKVGEWKPGSGVN----VTDVGAFYETSATNITLVVMTR 412
Query: 414 TFAKLRVLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
+ +PY+M + G+ +DL+K IA ++ F Y L ++ YG
Sbjct: 413 ---------EEKPYVMVKEDKNLTGNARFEGFCIDLLKWIAGQVGFQYAIRLVPDHMYGV 463
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T +WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P+ +
Sbjct: 464 YDPKTKEWNGIVRELMEKRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPT 523
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 524 RLFSFMNPLAVEIWLYVLAAYMLVSFTLFVMARFS 558
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP I E Q V
Sbjct: 530 NPLAVEIWLYVLAAYMLVSFTL-----FVMARFSPYEWNNPHPCLAESDIVENQFSVSNS 584
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+N
Sbjct: 585 FWFITGTFLRQGSGLNPKATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENA 644
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFKV 821
DLA+ +I YG +E GST FF+V
Sbjct: 645 ADLAEQTQISYGTLEGGSTMTFFRV 669
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
YQ ME+ PSVFVKS ++GV+RV++ G YAF MEST ++Y V+++C+L Q+GGLL
Sbjct: 674 YQXXWEFMETKSPSVFVKSYEDGVKRVLE--GDYAFLMESTMLDYAVQRDCNLTQIGGLL 731
Query: 640 DSKGYGIAMPT-SKFLAKFSFGFAKLR 665
DSKGYGIA P S + K S +L+
Sbjct: 732 DSKGYGIATPKGSPWRDKISLAILELQ 758
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 671 EPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
+PY+M + G+ +DL+K IA ++ F Y L ++ YG +P+T +WNG+
Sbjct: 415 KPYVMVKEDKNLTGNARFEGFCIDLLKWIAGQVGFQYAIRLVPDHMYGVYDPKTKEWNGI 474
Query: 726 IGELQEQ 732
+ EL E+
Sbjct: 475 VRELMEK 481
>gi|443723637|gb|ELU11964.1| hypothetical protein CAPTEDRAFT_165192 [Capitella teleta]
Length = 856
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 265/501 (52%), Gaps = 39/501 (7%)
Query: 80 IESMCQMFDIPHVEAFWD---PNKYFIPTNGVHG---------VNVYPESHLISKGISVI 127
I SMC ++PH+E+ + + IP + G VNVYPE+ +SK + +
Sbjct: 6 INSMCNTLEVPHLESRLEVRTAGAHTIPMGLMLGNSAERQMFSVNVYPEASFMSKALMAL 65
Query: 128 INDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLK 187
I +W F I+Y ++L+ LQ +L + D EI T+RQ P + R LK
Sbjct: 66 IEHFEWKKFCILYGDQNDLLLLQDILRAPLNSDVEI-------TVRQAHPHS--LRETLK 116
Query: 188 EIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
EI +L ++D T +LK A +V ++ +YI++ T+D DF
Sbjct: 117 EISKRGFHKVLAHLNIDLTYALLKAALQVQMLDPSHHYIVTNLD----LETLDLDDFAHS 172
Query: 248 YANITTVRMINPTNPHIRSIMNGW-IYEENERGRSL--NVRAETVKIEAALMYDAVYLFA 304
YANIT R+IN +P ++ ++ +Y+ +G L + + +K EAALMYDAVY+ A
Sbjct: 173 YANITGFRLINRDHPRVKDVLKQMEMYQRFSQGAKLLNSTKPPIIKTEAALMYDAVYVLA 232
Query: 305 AALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFS 363
LQ + + L LSC+ +W G + N + + ++G+TG+I D GRR F
Sbjct: 233 HGLQQVDKSTRLRLVNLSCDGDQAWAFGSSLYNYLNLVEMEGLTGKITFDR--GRRLDFE 290
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
++ ++ + K +GTWNT G N S+ E + + NRTL VT+ L +
Sbjct: 291 VDILQLKEEGTKKVGTWNTWAGANFSKAEEMV--RVGGQFGNRTLVVTTIYERPYMELKK 348
Query: 424 GEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK-WNGLIGE 482
E ++ N + G+ VDL++ IA + F Y+ ++ + YG P K W G++ E
Sbjct: 349 SEQPLIGNEK---YQGFCVDLLEEIAQIVGFQYEIIIVADGRYGA--PDNNKVWTGMVQE 403
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
+ +RADLA+ LTI R +DFT PFM LGISIL+++P ++ P LFSFL PL+ ++W
Sbjct: 404 IITKRADLAVAPLTINYLREQVIDFTKPFMNLGISILFKRPRRESPGLFSFLNPLAIEIW 463
Query: 543 VYMATAYLGVSLLLFFLARIS 563
+Y+ AY VSL++F LAR S
Sbjct: 464 LYVIAAYFVVSLMMFVLARFS 484
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 70/117 (59%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FVL R + Y NP + + E + F + +++ AVSTR+V G
Sbjct: 478 FVLARFSPYEWYNPHPCNTDNDVMENMFTLSNSFWFAVGTLMQQGSDINPRAVSTRIVGG 537
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K +I YG + GST+ FFK
Sbjct: 538 IWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTKISYGTMNAGSTKIFFK 594
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S + YQRM + MES VFV +++EG+ RV+K G YA+ MEST I+Y +++NC+L
Sbjct: 594 KTSKIPTYQRMWAFMESHEDEVFVTTSEEGINRVLK--GNYAYLMESTMIDYTIQRNCEL 651
Query: 633 MQVGGLLDSKGYGIA 647
MQVGGLLDSKGYGI
Sbjct: 652 MQVGGLLDSKGYGIG 666
>gi|380015482|ref|XP_003691730.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Apis
florea]
Length = 987
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 283/557 (50%), Gaps = 48/557 (8%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ A+ +INKD K L + L +Q+V DS T+K C S + IFGP
Sbjct: 25 AFKYAIYKINKD-KTLLANTTLVYDIQYVPKDDSFRTSKKACKQLSRSVQGIFGPSDPLL 83
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTF 136
I+S+C+ D+PH+EA D F PT +N+YP ++K +++ ++W
Sbjct: 84 GAHIQSICEALDVPHLEARVD----FEPTFKEFSINLYPSQDHLNKAFKDLMSFLNWTRV 139
Query: 137 TIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESH 196
IIYE L LQ ++ K R + IRQ P + YR +L+E+++
Sbjct: 140 AIIYEEDYGLFKLQDLV-------KSPPSARTEMYIRQAGPGS--YRQVLREVRHKEIYK 190
Query: 197 ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRM 256
+++D + ++ M DY+ + + T + T D +DF+ N+T R+
Sbjct: 191 LIVDTDPAHMQQFFRAILQLQ-MNDYRYHYMFTT---FDIETFDLEDFKYNSVNMTAFRL 246
Query: 257 INPTNPHIRSIMNGWIYEENER----GRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
++ P + ++ + ER G ++ + ++ E AL+YD+V +FA L +L
Sbjct: 247 VDLEEPKVAEVL-----RQMERFQPIGHAILNKTGVIQAEPALVYDSVQVFAHGLAALDR 301
Query: 313 RKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVS 371
L P LSCE W GL + N + ++ + G+TG I + G+RN+F L+ ++
Sbjct: 302 SHDLRPANLSCEKEEPWDDGLSLYNYINAVRLHGLTGHIEFNE--GKRNNFKLDLLKLKK 359
Query: 372 DQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN 431
++ +G W G+N V + + N TL V ++ + +PY+M
Sbjct: 360 EELVKVGEWKPGSGVN----VTDVGAFYETSAANITLVVMTR---------EEKPYVMVK 406
Query: 432 PE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 486
+ G+ +DL+K IA+++ F Y L ++ YG +P+T +WNG++ EL E+
Sbjct: 407 EDKNLTGNARFEGFCIDLLKWIASQVGFQYAIRLVPDHMYGVYDPKTKEWNGIVRELMEK 466
Query: 487 RADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMA 546
RADLA+ +TI R + +DFT PFM LGI IL++ P+ + LFSF+ PL+ ++W+Y+
Sbjct: 467 RADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPTRLFSFMNPLAVEIWLYVL 526
Query: 547 TAYLGVSLLLFFLARIS 563
AY+ VS LF +AR S
Sbjct: 527 AAYMLVSFTLFVMARFS 543
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +Y++M MES PSVFVKS ++GV+RV++ G YAF MEST ++Y V+++C+L
Sbjct: 653 RDSKIGIYKKMWEFMESKSPSVFVKSYEDGVKRVLE--GDYAFLMESTMLDYAVQRDCNL 710
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 711 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 744
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP I E Q V
Sbjct: 515 NPLAVEIWLYVLAAYMLVSFTL-----FVMARFSPYEWNNPHPCLGESDIVENQFSVSNS 569
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+N
Sbjct: 570 FWFITGTFLRQGSGLNPKATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENA 629
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ +I YG +E GST FF+
Sbjct: 630 ADLAEQTQISYGTLEGGSTMTFFR 653
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 671 EPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
+PY+M + G+ +DL+K IA+++ F Y L ++ YG +P+T +WNG+
Sbjct: 400 KPYVMVKEDKNLTGNARFEGFCIDLLKWIASQVGFQYAIRLVPDHMYGVYDPKTKEWNGI 459
Query: 726 IGELQEQ 732
+ EL E+
Sbjct: 460 VRELMEK 466
>gi|270007786|gb|EFA04234.1| hypothetical protein TcasGA2_TC014487 [Tribolium castaneum]
Length = 900
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 285/583 (48%), Gaps = 83/583 (14%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ +VG F AF+ A+ +N + I P+ V DS +K +C
Sbjct: 30 VDVVGFFDEKNGLSEIAFQTAISNLN----IMKNSIRFNPLSTVVNTSDSFENSKFLCET 85
Query: 61 TSEG-IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHL 119
G + +F S + IIES+ +IP V+ W P+ + VNVYP L
Sbjct: 86 AEAGKVGGVFCATSAKIAPIIESVSDNLNIPAVQVAWRPSATYTDM----LVNVYPLPKL 141
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
+ +G+ I+ ++ W + + YE+ +NL+ LQ VL+ D S+ +++L P
Sbjct: 142 LFQGLGAIVRNLQWRSVVVFYESAENLIPLQDVLKT---QDYNGGNKYNSLMLKELGPGP 198
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
D YR GD + +L L +AHTV
Sbjct: 199 D-YR-----------------------------------QGDSWHCLLVLDE---DAHTV 219
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYD 298
DF+ ANITTVR+ +P + + + ++ W Y + +N+ +VK E ALM+D
Sbjct: 220 DFKLLNTT-ANITTVRIFDPASDNFQYAISNWNNYVKKMNIPGVNLDPYSVKTETALMHD 278
Query: 299 AVYLFAAALQSLGE--RKPLPTPLSCENPSSWQHGLGIGNLMKSIT--IDGM---TGRIN 351
AV++F + L + PT LSCEN W G I + +K+ T DG+ T I+
Sbjct: 279 AVHMFLKCITDLHATGKSVKPTKLSCENVDKWTPGFDIASFIKAYTHDTDGLYSTTAPIS 338
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFG--LNHSRTVEQMDKEKKEKIENRTLT 409
D+ GRR +FS+ VE D V+ WN + L ++ E +KE + K +T
Sbjct: 339 FDN-LGRRTNFSIFVVEGNRDD--VVAKWNPSDPEVLQFLKSEEDRNKELERKWSEGIVT 395
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGEL---------YGYSVDLIKMIANELNFTYKFVL 460
V S G PY+M + E G+S+DLI ++A +LN ++F +
Sbjct: 396 VAS---------IIGPPYLMVKEQKSETDLLEGNNRYEGFSMDLIALLAKDLNIKFRFEV 446
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ G + T WNGLI E+ ++RA+LAICDLTIT +RR VDF+ PFM LGISILY
Sbjct: 447 LKSGQRGAYDKTTKSWNGLIREILDRRAELAICDLTITPDRREVVDFSTPFMRLGISILY 506
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
RK K+ D+++FL+P S +W+Y AT YL ++++LFF++RIS
Sbjct: 507 RKAEAKEADMYAFLDPFSLKLWMYSATLYLALTVVLFFISRIS 549
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK-YAFFMESTGIEYEVEKNCD 631
+ SN SLYQRM +AME ++PSVF +SN GV RV EK + YAF MES+ +EY+++ CD
Sbjct: 659 RESNYSLYQRMWTAMEQAKPSVFEQSNDAGVARVQNEKNRLYAFLMESSTLEYQIQTKCD 718
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
L QVG LDSKGYGIAMP + + A LR+ QGE +K+
Sbjct: 719 LKQVGNWLDSKGYGIAMPLD-YPHRSRINEALLRLQEQGEINRLKD 763
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ ++ RL A MWWFFT+I+ +SY ANLAAFLTN R I + EDLAK +IKYG ++ G
Sbjct: 593 KGMAPRLAASMWWFFTIIVTNSYMANLAAFLTNERSQSEINSAEDLAKQTKIKYGTLDGG 652
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 653 STQGFFR 659
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 670 GEPYMMKNPETGEL---------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
G PY+M + E G+S+DLI ++A +LN ++F + + G + T
Sbjct: 401 GPPYLMVKEQKSETDLLEGNNRYEGFSMDLIALLAKDLNIKFRFEVLKSGQRGAYDKTTK 460
Query: 721 KWNGLIGELQEQ 732
WNGLI E+ ++
Sbjct: 461 SWNGLIREILDR 472
>gi|62484334|ref|NP_651941.2| CG11155, isoform A [Drosophila melanogaster]
gi|442614563|ref|NP_726649.3| CG11155, isoform D [Drosophila melanogaster]
gi|61699735|gb|AAF59382.3| CG11155, isoform A [Drosophila melanogaster]
gi|206597314|gb|ACI15751.1| FI01405p [Drosophila melanogaster]
gi|440218178|gb|AAN06582.3| CG11155, isoform D [Drosophila melanogaster]
Length = 910
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 176/576 (30%), Positives = 292/576 (50%), Gaps = 53/576 (9%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RINK+ K L P+ L +++V DS T K +C
Sbjct: 43 IRVGAIFTEDERESSIESAFKYAIYRINKE-KTLLPNTQLVYDIEYVPRDDSFRTTKKVC 101
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD---PNKYFIPTNGVHGVNVYP 115
+ G+ AIFGP + ++S+C+ +DIPH+E D +K F +N+YP
Sbjct: 102 SQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEF-------SINLYP 154
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE L L H + + + IRQ
Sbjct: 155 SHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLM------HSSTET----KAEMYIRQA 204
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L+ I+ I++D + + + ++ M D++ + + T +
Sbjct: 205 SPDS--YRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQ-MNDHRYHYMFTT---FD 258
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ NIT R+++ + ++N ++ ++N + ++ E+AL
Sbjct: 259 LETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTIN-GSPYIQTESAL 317
Query: 296 MYDAVYLFAAALQSLG---ERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
M+D+VY FA L L + LSC + +W G+ + N + + DG+TG +
Sbjct: 318 MFDSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
GRRN F L+ ++ ++ + +G W+ G+N S D I N TL V +
Sbjct: 378 --VEGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDS----NIANITLVVMT 431
Query: 413 KTFAKLRVLFQGEPYMMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYG 467
+ + PY+M + TG L G+ +DL+K IA ++ F YK L +N YG
Sbjct: 432 R---------EERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYG 482
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P +
Sbjct: 483 VYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQP 542
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 543 TRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 578
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + +VFVK+ ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 688 RDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVME--GSYAFLMESTMLDYAVQRDCNL 745
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 746 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 779
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP I E Q +
Sbjct: 550 NPLAIEIWLYVLAAYILVSFAL-----FVMARFSPYEWKNPHPCYKETDIVENQFSISNS 604
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++
Sbjct: 605 FWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESA 664
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ I YG +E GST FF+
Sbjct: 665 SDLAEQTEISYGTLEGGSTMTFFR 688
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--GY 686
+ +VG G I+ PT+ + + + + + + PY+M + TG L G+
Sbjct: 397 IQKVGYWHPDDGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDKNLTGNLRFEGF 455
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 456 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 501
>gi|62484418|ref|NP_726648.2| CG11155, isoform B [Drosophila melanogaster]
gi|61699736|gb|AAN06581.2| CG11155, isoform B [Drosophila melanogaster]
Length = 855
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 290/573 (50%), Gaps = 47/573 (8%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RINK+ K L P+ L +++V DS T K +C
Sbjct: 43 IRVGAIFTEDERESSIESAFKYAIYRINKE-KTLLPNTQLVYDIEYVPRDDSFRTTKKVC 101
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
+ G+ AIFGP + ++S+C+ +DIPH+E D + +N+YP
Sbjct: 102 SQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEY----NSKEFSINLYPSHT 157
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
L++ I+ ++W IIYE L L H + + + IRQ PD
Sbjct: 158 LLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLM------HSSTET----KAEMYIRQASPD 207
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ YR +L+ I+ I++D + + + ++ M D++ + + T + T
Sbjct: 208 S--YRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQ-MNDHRYHYMFTT---FDLET 261
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
D +DF+ NIT R+++ + ++N ++ ++N + ++ E+ALM+D
Sbjct: 262 YDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTIN-GSPYIQTESALMFD 320
Query: 299 AVYLFAAALQSLG---ERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
+VY FA L L + LSC + +W G+ + N + + DG+TG +
Sbjct: 321 SVYAFANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQF--V 378
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
GRRN F L+ ++ ++ + +G W+ G+N S D I N TL V ++
Sbjct: 379 EGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDS----NIANITLVVMTR-- 432
Query: 416 AKLRVLFQGEPYMMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYGTLN 470
+ PY+M + TG L G+ +DL+K IA ++ F YK L +N YG
Sbjct: 433 -------EERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYI 485
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P + L
Sbjct: 486 PETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRL 545
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 546 FSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 578
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA+ I YG +E GS
Sbjct: 786 ATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGS 845
Query: 815 TRNFFK 820
T FF+
Sbjct: 846 TMTFFR 851
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--GY 686
+ +VG G I+ PT+ + + + + + + PY+M + TG L G+
Sbjct: 397 IQKVGYWHPDDGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDKNLTGNLRFEGF 455
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 456 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 501
>gi|350422738|ref|XP_003493267.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Bombus
impatiens]
Length = 1031
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 183/629 (29%), Positives = 302/629 (48%), Gaps = 90/629 (14%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI IF ++++ +T AF+ AV +INK+ + + P LE +Q+V DS H +K C
Sbjct: 26 VKIGAIFTHDQKDSSTELAFKYAVYKINKE-RLILPKTTLEYDIQYVPKDDSFHASKKAC 84
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ A+FGP I S+C DIPH+EA D + K F +N+YP
Sbjct: 85 QQVKYGVQAVFGPSDPILGQHIHSICDALDIPHLEARLDLDTEAKEF-------SINLYP 137
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE LV L++++ + + E V +RQ
Sbjct: 138 AQSLLNAAYQDIMEFLNWTKVAIIYEDDYGLVKLRELVRSPKSREIE-------VNLRQA 190
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L E+K+ ++++D + L+ ++ M DY+ + L T +
Sbjct: 191 DPDS--YRQVLSEMKSKEIRNLIVDTRPEHMHHFLRMILQLQ-MNDYKYHYLFTT---FD 244
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ + NIT R+++ + +R I+ + G ++ ++ ++ E AL
Sbjct: 245 IETFDLEDFKYNFVNITAFRLVDAEDVGVRGILRD-MERYQPSGNTILNKSRVIQAEPAL 303
Query: 296 MYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
MYD+V +FA L++L + L P +SCE W GL + N + S+ + G++G I
Sbjct: 304 MYDSVQVFAVGLRTLEQSHALRPANISCEMEHPWDGGLSLINYINSVEMKGISGPIEF-- 361
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVE--------------------- 393
+ GRR F L+ ++ +G W G+N + T
Sbjct: 362 KEGRRIQFKLDLLKLKQHSLVKVGEWRPGAGVNVTDTAAFFEPGTANVTLLVITILEIPY 421
Query: 394 -QMDKEKKEKIENR-------TLTVTSKT--FAKLRVLFQGEPYMMKNPETGE------- 436
M EK R L ++ F+ L Y K+PETGE
Sbjct: 422 VMMHYEKNYTGNARFYGFCVDLLEAVAREVGFSYRLELVPDRKYGAKDPETGEWNGIVRE 481
Query: 437 ----------------------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G+ +DL+K IA+ + F Y+ L + YG + +TG
Sbjct: 482 LMRHEQPYVMLKSRGNFSGNARYEGFCIDLLKEIAHMVGFAYRIELVPDGKYGVYDYETG 541
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
+WNG++ +L +++ADLA+ +TI R + +DFT PFM LGISIL++ P LFSF+
Sbjct: 542 EWNGIVRQLIDKKADLAVGSMTINYARESVIDFTKPFMNLGISILFKVPTSHPARLFSFM 601
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PL+ +W+Y+ AY+ VS+++F +ARIS
Sbjct: 602 NPLAIQIWLYVLAAYVLVSVMMFVVARIS 630
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 68/117 (58%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R + Y NP + E Q + F I +++ +A STR+V G
Sbjct: 624 FVVARISPYEWNNPHPCHTESELVENQFSLANSFWFTIGTLMQQGSDLNPKATSTRIVGG 683
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM PI+N EDLA I YG ++ GST FF+
Sbjct: 684 IWWFFTLIIISSYTANLAAFLTVERMITPIENAEDLAGQTDIAYGTLDSGSTMTFFR 740
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M ME+ +PSVFV + +EG++RV++ G YAF MEST
Sbjct: 730 LDSGSTMTF-FRDSMIETYKKMWRFMENKKPSVFVPTYEEGIQRVLQ--GDYAFLMESTM 786
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 787 LDYIVQRDCNLTQIGGLLDSKGYGIATPMGSPWRDKISLAILELQ 831
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E I+++++ K L++VG G + T+ F + L +
Sbjct: 361 FKEGRRIQFKLDLLKLKQHSLVKVGEWRPGAGVNVT-DTAAFFEPGTANVTLLVITILEI 419
Query: 672 PYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + E YG+ VDL++ +A E+ F+Y+ L + YG +P+TG+WNG++
Sbjct: 420 PYVMMHYEKNYTGNARFYGFCVDLLEAVAREVGFSYRLELVPDRKYGAKDPETGEWNGIV 479
Query: 727 GELQEQVDTFILF 739
EL +++
Sbjct: 480 RELMRHEQPYVML 492
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 30/122 (24%)
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGE----------------- 682
+++ YG + + +A+ GF+ L Y K+PETGE
Sbjct: 433 NARFYGFCVDLLEAVAR-EVGFSYRLELVPDRKYGAKDPETGEWNGIVRELMRHEQPYVM 491
Query: 683 ------------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 730
G+ +DL+K IA+ + F Y+ L + YG + +TG+WNG++ +L
Sbjct: 492 LKSRGNFSGNARYEGFCIDLLKEIAHMVGFAYRIELVPDGKYGVYDYETGEWNGIVRQLI 551
Query: 731 EQ 732
++
Sbjct: 552 DK 553
>gi|344287220|ref|XP_003415352.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Loxodonta
africana]
Length = 833
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 240/434 (55%), Gaps = 39/434 (8%)
Query: 142 THDNLVYLQQVLENAHDDDKEIRPGRPSV--TIRQLPPDTDDYRPLLKEIKNSSESHILL 199
T L+ LQ+++ + P R ++ IRQLP D+DD RPLLKE+K E I+
Sbjct: 95 TKKGLIRLQELI---------MAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIF 145
Query: 200 DCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINP 259
DCS ILKQA + +M +Y ++I + ++ + +D + ++ N+T R++N
Sbjct: 146 DCSHTMAAQILKQAMAMGMMTEYYHFIFTT----LDLYALDLEPYRYSGVNLTGFRILNV 201
Query: 260 TNPHIRSIMNGWIYEENERG-RSLNVRAETVKI-EAALMYDAVYLFAAALQSLGERKPLP 317
NPH+ +I+ W E + R+ + + V + +AAL+YDAV++ + Q R P
Sbjct: 202 DNPHVSAIVEKWSMERLQAAPRTESGLLDGVMMTDAALLYDAVHIVSVCYQ----RAPQM 257
Query: 318 T--PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWK 375
T L C +W+ G N +K +G+TGRI + +G R F L+ V D +
Sbjct: 258 TVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIVSLKEDGLE 317
Query: 376 VLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETG 435
+G W+ A GLN + + + + NR+L VT+ VL EP++M
Sbjct: 318 KVGVWSPAEGLNITEVTKGRGPNVTDSLTNRSLIVTT-------VL--EEPFVMFRKSDR 368
Query: 436 ELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRAD 489
LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG+I EL + +AD
Sbjct: 369 TLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNGMIKELIDHKAD 427
Query: 490 LAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAY 549
LA+ LTIT R A+DF+ PFMTLG+SILYRKP P +FSFL PLS D+W+Y+ AY
Sbjct: 428 LAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAY 487
Query: 550 LGVSLLLFFLARIS 563
LGVS +LF +AR S
Sbjct: 488 LGVSCVLFVIARFS 501
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR++ G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG V+ G
Sbjct: 545 KALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDG 604
Query: 814 STRNFFK 820
+T FFK
Sbjct: 605 ATMTFFK 611
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S +++M + M SS+PS VK+N+EG++R + YA MEST IEY ++NC+L
Sbjct: 611 KKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRTLT--ADYALLMESTTIEYVTQRNCNL 667
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGL+DSKGYGI P S + K + +L+
Sbjct: 668 TQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQ 701
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EP++M LYG Y +DL+K +A+ L F+Y+ L + YG + + G+WNG
Sbjct: 358 EPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDK-GQWNG 416
Query: 725 LIGEL 729
+I EL
Sbjct: 417 MIKEL 421
>gi|270003620|gb|EFA00068.1| hypothetical protein TcasGA2_TC002882 [Tribolium castaneum]
Length = 583
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 294/569 (51%), Gaps = 46/569 (8%)
Query: 4 VGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
IF ++++ V AF+ AV +INKD + L + L +Q+V DS T+K +C
Sbjct: 7 CAIFTEDQKDSSVELAFKYAVYKINKD-RVLLSNTTLVYDIQYVPRDDSFRTSKKVCRQM 65
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
G+ AIFGP I+S+C+ D+PH+EA D F P + +N++P ++
Sbjct: 66 EFGVQAIFGPSDPILGAHIQSICEALDVPHLEARID----FEPLSKDLSINLHPSQEHMN 121
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
K ++ ++W IIYE L LQ+++ K R + IRQ P +
Sbjct: 122 KAFKDLMTFLNWTKVAIIYEEDYGLFKLQELV-------KAPAAARTEMYIRQAGPTS-- 172
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR +LKE++ +++D + + ++ M DY+ + + T + T D
Sbjct: 173 YRQVLKEVRQKEIYKLIVDTNPRNIQKFFRAILQLQ-MNDYRYHYMFTT---FDLETFDL 228
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER-GRSLNVRAETVKIEAALMYDAV 300
+DF+ NIT R+++ +P ++ + + E+ + G ++ ++ ++ E ALM+D+V
Sbjct: 229 EDFKYNSVNITAFRIVDVDDPQVKESLE--VMEKFQPIGHAILNKSGIIQAEPALMFDSV 286
Query: 301 YLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSIT-IDGMTGRINLDSQTGRR 359
Y+FA L ++G KP+ LSC+ W G + N + + + G+TG I + G+R
Sbjct: 287 YVFAKGLAAMGSIKPMN--LSCDVEKPWDDGSSLYNYLGDVDDLRGLTGNIEFNG--GKR 342
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
++F L+ ++ ++ + +G W + G+N + + + N TL V ++
Sbjct: 343 SNFKLDLLKLKKEEIRKVGQWTPSGGVN----ITDPNAFYESHAPNITLVVMTR------ 392
Query: 420 VLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
+ PY+M E G+ +DL+K IA ++ F Y L ++ YG +P T
Sbjct: 393 ---EERPYVMVKDEKNLTGNARYEGFCIDLLKWIAGQVGFQYTIRLVPDHMYGVYDPDTK 449
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
+WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P + LFSF+
Sbjct: 450 EWNGIVRELMEKRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFM 509
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 510 NPLAVEIWLYVLAAYMLVSFTLFVMARFS 538
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 631 DLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE-----TGELYG 685
++ +VG S G I P + F + + + + PY+M E G
Sbjct: 356 EIRKVGQWTPSGGVNITDPNA-FYESHAPNITLVVMTREERPYVMVKDEKNLTGNARYEG 414
Query: 686 YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+ +DL+K IA ++ F Y L ++ YG +P T +WNG++ EL E+
Sbjct: 415 FCIDLLKWIAGQVGFQYTIRLVPDHMYGVYDPDTKEWNGIVRELMEK 461
>gi|383865939|ref|XP_003708429.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Megachile
rotundata]
Length = 1008
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 171/575 (29%), Positives = 290/575 (50%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF ++++ + AF+ A+ +INKD K L + L +Q+V DS T+K C
Sbjct: 22 IRIGAIFTEDQKDSPSELAFKYAIYKINKD-KTLLANTTLVYDIQYVPKDDSFRTSKKAC 80
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
S + IFGP I+S+C+ D+PH+EA D F PT +N+YP
Sbjct: 81 KQLSRSVQGIFGPSDPLLGAHIQSICEALDVPHLEARVD----FEPTFKEFSINLYPSQD 136
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
++K +++ ++W IIYE L LQ ++ K R + IRQ P
Sbjct: 137 HLNKAFKDLMSFLNWTKVAIIYEEDYGLFKLQDLV-------KSPPSTRTEMYIRQAGPG 189
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ YR +L+E+++ +++D + ++ M DY+ + + T + T
Sbjct: 190 S--YRQVLREVRHKEIYKLIVDTDPAHMQQFFRAILQLQ-MNDYRYHYMFTT---FDIET 243
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER----GRSLNVRAETVKIEAA 294
D +DF+ N+T R+++ P + ++ + ER G ++ + ++ E A
Sbjct: 244 FDLEDFKYNSVNMTAFRLVDLEEPKVAEVL-----RQMERFQPIGHAILNKTGVIQAEPA 298
Query: 295 LMYDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
L+YD+V +FA L +L L LSCE W GL + N + + + G+TG I +
Sbjct: 299 LVYDSVQVFAHGLAALDRSHDLRLANLSCEKEKPWDDGLSLYNYINAAGLHGLTGHIEFN 358
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
G+RN+F L+ ++ ++ +G W G+N V + + N TL V ++
Sbjct: 359 E--GKRNNFKLDLLKLKKEELVKVGEWKPGSGVN----VTDVGAFYETTATNITLVVMTR 412
Query: 414 TFAKLRVLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
+ +PY+M + G+ +DL+K IA ++ F Y L ++ YG
Sbjct: 413 ---------EEKPYVMVKEDKNLTGNARFEGFCIDLLKWIAGQVGFQYAIRLVPDHMYGV 463
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T +WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P+ +
Sbjct: 464 YDPETKEWNGIVRELMEKRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPT 523
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 524 RLFSFMNPLAVEIWLYVLAAYMLVSFTLFVMARFS 558
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M MES PSVFVKS ++GV+RV++ G YAF MEST ++Y V+++C+L
Sbjct: 668 RDSKIGIYQKMWRFMESKSPSVFVKSYEDGVKRVLE--GDYAFLMESTMLDYAVQRDCNL 725
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 726 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 759
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP + E Q V
Sbjct: 530 NPLAVEIWLYVLAAYMLVSFTL-----FVMARFSPYEWNNPHPCLAESDVVENQFNVSNS 584
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+N
Sbjct: 585 FWFITGTFLRQGSGLNPKATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENA 644
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ I YG +E GST FF+
Sbjct: 645 ADLAEQTEISYGTLEGGSTMTFFR 668
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 671 EPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
+PY+M + G+ +DL+K IA ++ F Y L ++ YG +P+T +WNG+
Sbjct: 415 KPYVMVKEDKNLTGNARFEGFCIDLLKWIAGQVGFQYAIRLVPDHMYGVYDPETKEWNGI 474
Query: 726 IGELQEQ 732
+ EL E+
Sbjct: 475 VRELMEK 481
>gi|345488319|ref|XP_001605775.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Nasonia
vitripennis]
Length = 1023
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 172/575 (29%), Positives = 293/575 (50%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF ++++ + AF+ AV +INK+ K L P+ + +Q+V DS T+K C
Sbjct: 22 IRIGAIFTEDQKDSPSELAFKYAVYKINKE-KILLPNTTVVYDIQYVPKDDSFRTSKKAC 80
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
S + IFGP I+S+C+ D+PH+EA D F P+ +N+YP
Sbjct: 81 KQLSRSVQGIFGPADPLLGAHIQSICEALDVPHLEARVD----FEPSFKEFSINLYPSQD 136
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+++ +++ ++W IIYE L LQ ++++ E+ IRQ P
Sbjct: 137 HLNRAFRDLMSFLNWTKVAIIYEEDYGLFKLQDLVKSPPSPKTEMY-------IRQAGPG 189
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+ YR +L+EI++ +++D + ++ M DY+ Y TS+ + T
Sbjct: 190 S--YRQVLREIRHKEIYKLIIDTDPMYMPQFFRAILQLQ-MNDYR-YHYMFTSF--DIET 243
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER----GRSLNVRAETVKIEAA 294
D +DF+ N+T R+++ P + + + ER G ++ R+ ++ E A
Sbjct: 244 FDLEDFKYNSVNMTAFRLVDTEEPSVAETL-----RQMERFQPVGHAILNRSGIIQAEPA 298
Query: 295 LMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
L+YD+V +FA L +L L P LSCE W GL + N + S + G+TG I +
Sbjct: 299 LVYDSVQVFAHGLAALDRSHILRPANLSCEREEPWDDGLSLYNYINSAGLQGLTGHIEFN 358
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
G+R +F L+ ++ ++ +G W G+N + + + N TL V ++
Sbjct: 359 E--GKRTNFKLDLLKLKKEELVKVGEWKLGSGVN----ISDVGAFYETTATNITLVVMTR 412
Query: 414 TFAKLRVLFQGEPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
+ +PY+M + G+ +DL+K IA ++ F Y L ++ YG
Sbjct: 413 ---------EEKPYVMVREDKNLTGNARFEGFCIDLLKWIAGQVGFQYAIRLVPDHMYGV 463
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T +WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL++ P+ +
Sbjct: 464 YDPETKEWNGIVRELMEKRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPT 523
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 524 RLFSFMNPLAVEIWLYVLAAYMLVSFTLFVMARFS 558
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S +++YQ+M MES +PSVFV +EGV+RV++ G YAF MEST ++Y V+++C+L
Sbjct: 670 RDSKIAIYQKMWRYMESKQPSVFVSDYEEGVKRVLE--GNYAFLMESTMLDYAVQRDCNL 727
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 728 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 761
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 7/146 (4%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQV-DT 735
NP E++ Y + +++ L FV+ R + Y NP + E Q + ++
Sbjct: 530 NPLAVEIWLYVLAAYMLVSFTL-----FVMARFSPYEWNNPHPCMGETDLVENQFTISNS 584
Query: 736 FILFFIYSILFFIYTFVN-EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIK 794
F +F L + +N +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI+
Sbjct: 585 FCFWFTVGTLMQQGSDLNPKATSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIE 644
Query: 795 NVEDLAKAGRIKYGCVEMGSTRNFFK 820
N DLA+ I YG +E GST FF+
Sbjct: 645 NAADLAEQTDIPYGTLEGGSTMTFFR 670
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 671 EPYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
+PY+M + G+ +DL+K IA ++ F Y L ++ YG +P+T +WNG+
Sbjct: 415 KPYVMVREDKNLTGNARFEGFCIDLLKWIAGQVGFQYAIRLVPDHMYGVYDPETKEWNGI 474
Query: 726 IGELQEQ 732
+ EL E+
Sbjct: 475 VRELMEK 481
>gi|195442540|ref|XP_002069012.1| GK12298 [Drosophila willistoni]
gi|194165097|gb|EDW79998.1| GK12298 [Drosophila willistoni]
Length = 1021
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 284/559 (50%), Gaps = 56/559 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
F AV R+N+D K+L P+ L +++V YDS T + +C+ G+ A+F P
Sbjct: 45 VFRYAVHRLNRD-KSLLPETTLIYDIEYVSQYDSFQTVQKVCSLVRTGVQALFSPTDYVL 103
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTF 136
I S+C DIP + P + +NV+P ++ +I ++W F
Sbjct: 104 STHINSICDALDIPDIGR--SPQDF--------SINVHPSQQYVNHAFVDVIRYLNWTKF 153
Query: 137 TIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESH 196
I+YE +V L Q+ R + V IRQ+ Y +L E KN +
Sbjct: 154 GILYEKEYGIVNLHQLS----------RSVQAEVHIRQVSRAA--YLSVLNEFKNKEIHN 201
Query: 197 ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRM 256
I++D + +LK + M +Y+ + L TS+ + T D +DF+ + NIT R+
Sbjct: 202 IIIDTNSAGISILLKNILQ-QQMNEYKYHYL-FTSF--DLETFDLEDFKYNFVNITAFRL 257
Query: 257 INPTNPHIRSIMNG------WIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSL 310
++ + ++ I+ IY+ N+ L R +T++ E ALM+D+VY+FA LQ+L
Sbjct: 258 VDVGDVAVKEILKDIETYGRHIYQRNDTNEHL--RKKTIETEPALMFDSVYVFAIGLQTL 315
Query: 311 GERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY 369
+ L + L+C++ + W GL + N + ++ G+TG I + G+R F L+ ++
Sbjct: 316 EQSHTLYLSNLTCDDETPWNGGLSLINYINAVEWKGLTGPIQF--KEGQRVEFKLDLIKL 373
Query: 370 VSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM 429
+G W LN + E E ++ VT L PY+M
Sbjct: 374 KQHSIVKVGEWTPQDHLNIT--------EPSLFFEAGSMNVTLVVITILET-----PYVM 420
Query: 430 KNPE---TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 484
+ E TG YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++ +L
Sbjct: 421 MHYEKNYTGNERFYGFCVDILERISHEVGFDYILDLVPDRKYGAKDPETGQWNGMVAQLM 480
Query: 485 EQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVY 544
+ +ADLA+ +TIT R + +DFT PFM LGISIL++ P ++ LFSF+ PL+ ++W+Y
Sbjct: 481 KYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTQEPTRLFSFMNPLAIEIWIY 540
Query: 545 MATAYLGVSLLLFFLARIS 563
+ AYL VSL ++ + ++S
Sbjct: 541 VLAAYLMVSLSIYIVGKLS 559
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M +M++ RPS F + ++G+ RV +G YAF MEST
Sbjct: 659 LESGSTMTF-FRDSMIETYKKMWRSMDNKRPSAFTTTYEDGINRV--NQGNYAFLMESTM 715
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V++ C+L Q+GGLLD+KGYGIA P S + K S +L+
Sbjct: 716 LDYIVQRKCNLTQIGGLLDTKGYGIATPKGSPWRDKMSLAILELQ 760
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+++ +W FF+LI+++SYTANLAAFLT RM PI+N EDLA I YG +E GS
Sbjct: 604 AMSTRIISSIWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLESGS 663
Query: 815 TRNFFK 820
T FF+
Sbjct: 664 TMTFFR 669
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E +E++++ K +++VG I P S F S + +
Sbjct: 358 FKEGQRVEFKLDLIKLKQHSIVKVGEWTPQDHLNITEP-SLFFEAGSMNVTLVVITILET 416
Query: 672 PYMMKNPE---TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + E TG YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++
Sbjct: 417 PYVMMHYEKNYTGNERFYGFCVDILERISHEVGFDYILDLVPDRKYGAKDPETGQWNGMV 476
Query: 727 GEL 729
+L
Sbjct: 477 AQL 479
>gi|198472826|ref|XP_001356081.2| GA20200 [Drosophila pseudoobscura pseudoobscura]
gi|198139178|gb|EAL33140.2| GA20200 [Drosophila pseudoobscura pseudoobscura]
Length = 912
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 290/609 (47%), Gaps = 50/609 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF++AV +N A+ P++ LEPI ++ DS+ L C
Sbjct: 25 VKIGAIFFDTEMKLAEAFDVAVEEVN----AVNPNLRLEPIKHYMTIDDSIVLQDLSCEL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT-NGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + F N VNV P +
Sbjct: 81 IGNGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSFRERLNHQMTVNVAPMELM 140
Query: 120 ISKGISVIIND--MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L LQ + I+ Q
Sbjct: 141 LSNAFSDILGSKPFDWKSFTIAYEKSTHLNRLQHIFAWKQLHKTGIK--------MQEFQ 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DDYR L K I N+ E +LLDC D V ++ + + ++ G + N L LT+ +
Sbjct: 193 RGDDYRILWKRINNAREKFVLLDCPSDILVDVVNASIDFNMTGSFNN--LFLTNLDTHVS 250
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D + + VR+ P + ++ + E + R SL + L+Y
Sbjct: 251 GIDRFYSREFTVTVAAVRLRTYIPPPVHDEIDVFDNEVDTRFDSLGTQ---------LVY 301
Query: 298 DAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRIN 351
DAV LF AL + +R P SC + WQ G + MK +T + T R+
Sbjct: 302 DAVVLFYNALLDMSQRSGFYMPQFSCGH-GFWQPGPHVVQKMKELTPKQIKPPFKTQRLK 360
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEKI 403
+++ G+R F+LE + D +V WN F L N S+ V+Q E KE
Sbjct: 361 INA-NGQREDFNLEVYNPLID--RVTHIWNKDFQLVDIEKIKENSSQAVKQRRLENKEDF 417
Query: 404 ENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLER 462
+ + T T K ++ EP + GY+VDLI +A E F + F R
Sbjct: 418 SQKPVRFTVATRVGKPYFSWRDEPEGVHYEGNERFEGYAVDLIYKLAEECKFDFDFEPVR 477
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL K
Sbjct: 478 DNKYGSYDAATDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYK 537
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQR 582
+ D++ FL P +VW+Y+ A + S+ + R+ GS +N+N L +
Sbjct: 538 EPPPKADIYGFLNPYGVEVWLYVMIAMMITSMAMILAGRMDHGS-WEPPTENANHELVRH 596
Query: 583 ----MHSAM 587
MH+ M
Sbjct: 597 NIWNMHNTM 605
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV +G YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEGVDRVKLSRGAYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G KL QG Y ++N
Sbjct: 762 AVPLNANFRSNLSVGILKLSE--QGVLYNLRN 791
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 684 YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG-LIGELQEQVDTFILFFIY 742
YG V L MIA + + +L +G+ P T N L+ + + +
Sbjct: 552 YGVEVWLYVMIAMMIT-SMAMILAGRMDHGSWEPPTENANHELVRHNIWNMHNTMWLVLG 610
Query: 743 SILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA 802
SIL + + RL+ WW F L++ +Y A LAAF+T+++++ I ++ DL
Sbjct: 611 SILTQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKLSGNIASLHDLIDQ 670
Query: 803 GRIKYGCVEMGSTRNFF 819
++++G + G+T +F
Sbjct: 671 NKVQFGTIRGGATSVYF 687
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI +A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYKLAEECKFDFDFEPVRDNKYGSYDAATDEWDGIIRQL 498
>gi|390339525|ref|XP_784968.3| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Strongylocentrotus purpuratus]
Length = 903
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 289/574 (50%), Gaps = 39/574 (6%)
Query: 1 MKIVGIFG----PNEEEVATAFEIAVRRINKDFKALPPD--IILEPIVQHVENYDSLHTA 54
++I GIF ++EE+A F A+ ++N + P +L +QHV D+
Sbjct: 34 VQIGGIFNRDGMSSKEELA--FRFAIEKLNAKIRNDPSQNMSMLTYDIQHVRGNDTFDAT 91
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
K +C G+AA+FGP S+++ ++S+C + DIPH++ W+P + +P G + ++
Sbjct: 92 KKVCQQLGVGVAAVFGPTSLQDSLAVQSVCDVMDIPHIQTHWEPKPH-LP--GQSTIYMH 148
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI-- 172
P + ++S+ I ++ W +IIY+ + L L+ VL + D E+ TI
Sbjct: 149 PSNDIVSRAIRDLVKAFRWKKISIIYDDFNGLTRLKDVLMESMHRDIEL-------TIYY 201
Query: 173 -RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
+ +P + ++K IK+S +HI++DCS + +L++ ++ +M DY +YI++
Sbjct: 202 TKSMP-----FGTMMKRIKSSGANHIIIDCSRKSLIQLLEKMMQLQMMMDYYHYIITP-- 254
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKI 291
++ ++D + N+T +++++ P ++ Y+E + +
Sbjct: 255 --LDTFSLDLTRYSGDMVNMTALQLVDMQVPENMELLRE--YKEYALRNGVGPEDAGMTT 310
Query: 292 EAALMYDAVYLFAAALQSLGERKP--LPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
E + +D V L + AL + LSCE W+ GL + N ++S + G+TG
Sbjct: 311 EGVITFDGVNLISKALHHANRQTSNLAVKALSCERNQPWETGLTLHNDIESTVMKGLTGD 370
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
+ + G R++ L + +G W G++ + + + I NRTL
Sbjct: 371 VEFED--GERSNVVLHVTSLHEEGMLQVGNWTREHGIDMYPVLYKSSAASRAGI-NRTLV 427
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ K V+F+ + G+ +DL+ ++ +L F Y+ L + YG
Sbjct: 428 VTT-VLEKPFVMFKTTEDGRTLEGNDKFEGFCIDLLHQLSLKLGFDYRIKLVEDGNYGG- 485
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ G ++G++ EL E++ADLA+ LTI+ R +DF+ PFM LG+ ILYR + P
Sbjct: 486 QKEDGSFDGMVAELMERKADLAVAPLTISYVREQVIDFSKPFMYLGVCILYRVSEPQNPG 545
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PLSFD+W+Y+ AYL VSL F LAR S
Sbjct: 546 VFSFLNPLSFDIWMYIIMAYLTVSLSFFMLARFS 579
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STR+++G WWFF+LI++SSYTANLAAFLT RM PI N +DLAK I+YG G
Sbjct: 623 KAFSTRVLSGFWWFFSLILVSSYTANLAAFLTVERMVSPITNADDLAKQTTIEYGTRTSG 682
Query: 814 STRNFFK 820
+T FFK
Sbjct: 683 ATNTFFK 689
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNC-D 631
K S + Y+ M M SS+P VFV++ +EG++RV+ K YAF MEST EYEV ++C +
Sbjct: 689 KRSTIHTYKTMWEFM-SSKPHVFVQTYREGIDRVLNNK-NYAFLMESTMAEYEVSQHCKN 746
Query: 632 LMQVGGLLDSKGYGIAMP 649
L +GGL++S+GYG+ P
Sbjct: 747 LTIIGGLMNSRGYGVGTP 764
>gi|332018739|gb|EGI59304.1| Glutamate receptor, ionotropic kainate 2 [Acromyrmex echinatior]
Length = 865
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 295/585 (50%), Gaps = 73/585 (12%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCNATSE 63
IF EE + + F A+ + L +++ +++++E N DS TA C E
Sbjct: 5 AIFHKGEEHLQSVFSRAISDTKNENHELVFELV--AVIKYIEGNTDSFMTAIAACELLEE 62
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKY---FIPTNGVHGVNVYPESHLI 120
G+AAIFGP S I+ S+ FDIPH+E W +K + + +N+ P S +
Sbjct: 63 GVAAIFGPSSRYTSGIVASIAARFDIPHIEYVWRESKEKQNRKKASSLMTINISPASEQV 122
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ I+ IIN M+W F IYET + L LQ+ L D++ P + +
Sbjct: 123 SQAIADIINSMNWRKFAAIYETDEGLSRLQKTLILKGDEND------PIIHTAWKLDEGP 176
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYR +LK+I+ +I++D + + +L QA+EV L+ DY +++++ ++++ +
Sbjct: 177 DYRSMLKQIRYLPMQNIIIDVKPENIMKVLHQAEEVSLLSDYSDFVIT----YLDSSILS 232
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+ G NIT G EN+ ++ +++A++YDAV
Sbjct: 233 IIEMLNGTFNIT-----------------GLSIRENDDIEGID------SLDSAVLYDAV 269
Query: 301 YLFAAALQSLGERKPL--------PTPLSCENPS-SWQHGLGIGNLMKSITIDG-MTGRI 350
+L AL++L R P PLSC N + +Q G I ++M+ I+ G +TG I
Sbjct: 270 FLLHTALETLNARNIENEVDMSIDPIPLSCTNSTRKYQVGSYITSIMREISKRGKITGII 329
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+D + GRR F+++ + + G W+T G++ ++QM K K I R +
Sbjct: 330 YID-EYGRRRDFNVKILNFRQSSMIQTGYWDTFNGIH----IKQMKKVKDIYIYGRF--I 382
Query: 411 TSKTFAKLRVLFQGEPYMMK---NPETGELYG------YSVDLIKMIANELNF---TYKF 458
K F K+ V + PY+M+ G L G Y +DLI +IAN L F ++
Sbjct: 383 EEKIF-KISV-HKSRPYIMEVIDGSTRGVLIGQKRYEGYCIDLINLIANFLRFKGIVFQL 440
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
V + + Y +PQT WNGLI + + ADLA+ DLTITS R VDF++PFMT G SI
Sbjct: 441 VTDGPSNY---DPQTKTWNGLIRSILDHEADLAVSDLTITSLRMTVVDFSLPFMTTGYSI 497
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++ KP K+ F L P S +VW+ MA A L VS++LF AR++
Sbjct: 498 VFSKPEKQTSSFFPVLVPFSKEVWLSMAIACLVVSIMLFLQARMA 542
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+NS S Y++M + M +S+PSVF S KEG+ RV+ K +YAF MES EY +E+ CDL
Sbjct: 652 QNSTYSTYKQMWNTMVNSKPSVFTSSYKEGINRVIHGKRRYAFIMESDSSEYHIERECDL 711
Query: 633 MQVGGLLDSKGYGIAMP 649
+++G +++S+ YGIAMP
Sbjct: 712 IKIGSVIESREYGIAMP 728
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 50/64 (78%)
Query: 757 STRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTR 816
S R++A +WWFFTLIM S YTANLAAFLT ++ P+K +EDLA+ +IKYG ++ G+T
Sbjct: 589 SLRMLASIWWFFTLIMYSLYTANLAAFLTVDKIGIPVKGIEDLARQTKIKYGILKGGATA 648
Query: 817 NFFK 820
+FF+
Sbjct: 649 SFFQ 652
>gi|195161688|ref|XP_002021694.1| GL26369 [Drosophila persimilis]
gi|194103494|gb|EDW25537.1| GL26369 [Drosophila persimilis]
Length = 912
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 279/584 (47%), Gaps = 45/584 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF++AV +N A+ P++ EPI ++ DS+ L C
Sbjct: 25 VKIGAIFFDTEMKLAEAFDVAVEEVN----AVNPNLRFEPIKHYMTIDDSIVLQDLSCEL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT-NGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + F N VNV P +
Sbjct: 81 IGNGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSFRERLNHQMTVNVAPMELM 140
Query: 120 ISKGISVIIND--MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L LQ + I+ Q
Sbjct: 141 LSNAFSDILGSKPFDWKSFTIAYEKSTHLNRLQHIFAWKQLHKTGIK--------MQEFQ 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DDYR L K I N+ E +LLDC D V ++ + + ++ G + N L LT+ +
Sbjct: 193 RGDDYRILWKRINNAREKFVLLDCPSDILVDVVNASIDFNMTGSFNN--LFLTNLDTHVS 250
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D + + VR+ P + ++ + E + R SL + L+Y
Sbjct: 251 GIDRFYSREFTVTVAAVRLRTYIPPPVHDEIDVFDNEVDTRFDSLGTQ---------LVY 301
Query: 298 DAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRIN 351
DAV LF AL + +R P SC + WQ G + MK +T + T R+
Sbjct: 302 DAVVLFYNALLDMSQRSGFYMPQFSCGH-GFWQPGPHVVQKMKELTPKQIKPPFKTQRLK 360
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEKI 403
+++ G+R F+LE + D +V WN F L N S+ V+Q E KE
Sbjct: 361 INA-NGQREDFNLEVYNPLID--RVTHIWNKDFQLVDIEKIKENSSQAVKQRRLENKEDF 417
Query: 404 ENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLER 462
+ + T T K ++ EP + GY+VDLI +A E F + F R
Sbjct: 418 SQKPVRFTVATRVGKPYFSWRDEPEGVHYEGNERFEGYAVDLIYKLAEECKFDFDFEPVR 477
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL K
Sbjct: 478 DNKYGSYDAATDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYK 537
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGS 566
+ D++ FL P +VW+Y+ A + S+ + R+ GS
Sbjct: 538 EPPPKADIYGFLNPYGVEVWLYVMIAMMITSMAMILAGRMDHGS 581
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV +G YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEGVDRVKLSRGAYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G KL QG Y ++N
Sbjct: 762 AVPLNANFRSNLSVGILKLSE--QGVLYNLRN 791
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 684 YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG-LIGELQEQVDTFILFFIY 742
YG V L MIA + + +L +G+ P T N L+ + + +
Sbjct: 552 YGVEVWLYVMIAMMIT-SMAMILAGRMDHGSWEPPTENGNHELVRHNIWNMHNTMWLVLG 610
Query: 743 SILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA 802
SIL + + RL+ WW F L++ +Y A LAAF+T+++++ I ++ DL
Sbjct: 611 SILTQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKLSGNIASLHDLIDQ 670
Query: 803 GRIKYGCVEMGSTRNFF 819
++++G + G+T +F
Sbjct: 671 NKVQFGTIRGGATSVYF 687
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI +A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYKLAEECKFDFDFEPVRDNKYGSYDAATDEWDGIIRQL 498
>gi|328718441|ref|XP_001945266.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Acyrthosiphon pisum]
Length = 925
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 301/576 (52%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF +++ T AF+ AV RINKD KA+ P+ L +++V +DS +K +C
Sbjct: 47 IRIGAIFTQEDKDSTTEVAFKYAVYRINKD-KAILPNTTLVYDIEYVSPHDSFKASKKVC 105
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
G+ AIFGP + I S+C+ +P + D N V +++P +
Sbjct: 106 RLLESGVHAIFGPSDSHLASHIVSICESVSMPLLLTIADRVTDLNRRNFV--TDMFPARN 163
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ + +IN ++W I+Y+ + L+ +Q +++ + D +RQ+ D
Sbjct: 164 HLGQAFRDLINFLNWTKIAIVYDDEEGLLLVQNLMKMSKTD----------FYVRQV--D 211
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+R +++EIK+ +I++D + ++ M D++ + L T + T
Sbjct: 212 QHTHRQVMREIKDKHIFNIIVDVHPRNINGFFRSILQLQ-MNDFRYHFLFTT---FDLET 267
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENER----GRSLNVRAETVKIEAA 294
D +DF+ NIT+ R+++ N + +I+ E ER G+++ ++ ++ E A
Sbjct: 268 FDLEDFKYNSVNITSFRIVDDENHRVVNIL-----REMERFQRVGQNMLHKSGIIRAEPA 322
Query: 295 LMYDAVYLFAAALQSL-GERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
LM+DAV +FA ++ SL G + + +SC+ W +G + + + +++I+G+TG+++
Sbjct: 323 LMFDAVNVFAHSIGSLDGSSNSIQSSNVSCKTSDRWANGTFLYDRLNAVSIEGLTGKVHF 382
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR+ L+ ++ +Q K +G W + G+N + + + N TL V +
Sbjct: 383 DE--GRRSDIKLDLLKLHQEQVKKVGFWTPSTGIN----ITKHSVFYGHQSSNVTLIVVT 436
Query: 413 KTFAKLRVLFQGEPYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+ +PY+M KN Y G+ +DL+ IA+++ F Y L +N YG
Sbjct: 437 RV---------EKPYVMIKEDKNLTGNSKYEGFCIDLLHRIASQVGFHYAITLVPDNKYG 487
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T +WNG++ EL +++ADLA+ +TI R + VDFT PFM +GI IL++ P+ +
Sbjct: 488 AYDPTTKQWNGIVRELMDKKADLAMGSMTINYARESVVDFTKPFMNMGIGILFKVPSNEP 547
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LF+FL PL+ VW +M AY+ VS LFFLAR S
Sbjct: 548 SKLFAFLNPLATSVWSFMFLAYMAVSFSLFFLARFS 583
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 13/101 (12%)
Query: 559 LARISSGSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVK 608
+A +SS ++ Y ++S + +YQ+M ME + SVFV + EG ++V+
Sbjct: 665 VAELSSQEKITYGTLEGGSTMSFFRDSKIPIYQKMWKFMEKHQ-SVFVSTYDEGTKKVLG 723
Query: 609 EKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
G YAF MEST I+Y V+++C+L Q+ GLLDSKGYGIA P
Sbjct: 724 --GNYAFLMESTMIDYAVQRDCNLTQISGLLDSKGYGIATP 762
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A S R++ G+WWFFT+I+I SYTANL A T R+ PI+NV +L+ +I YG +E G
Sbjct: 623 KATSARILGGIWWFFTIIIIPSYTANLTALRTVERLQKPIQNVAELSSQEKITYGTLEGG 682
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 683 STMSFFR 689
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 671 EPYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
+PY+M KN Y G+ +DL+ IA+++ F Y L +N YG +P T +WNG+
Sbjct: 440 KPYVMIKEDKNLTGNSKYEGFCIDLLHRIASQVGFHYAITLVPDNKYGAYDPTTKQWNGI 499
Query: 726 IGELQEQ 732
+ EL ++
Sbjct: 500 VRELMDK 506
>gi|390339527|ref|XP_789521.3| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Strongylocentrotus purpuratus]
Length = 918
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 301/591 (50%), Gaps = 68/591 (11%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFK-ALPPDIILEPIVQHVENYDSLHTA 54
+ I GIF G EE AF++AV R+ K + A+ L ++++++ DS
Sbjct: 41 ITIGGIFPRQMAGSPEE---AAFKLAVDRVGKTMRSAMNNTATLSADIRYIQHNDSFEAT 97
Query: 55 KLMCNAT--SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV---- 108
+ +C + GIAA+ GP SI+ + S+C D+PHV D + F GV
Sbjct: 98 RAVCAQLQHANGIAAVVGPTSIDGALAVRSVCNSVDVPHV----DTRRQF---GGVEPLS 150
Query: 109 HGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRP 168
+ +++YP + IS + I+ W T++Y+ + L LQ VLE + +++ R
Sbjct: 151 NTISLYPHARYISSLMVDIVKHYKWKKVTVMYDEDEALERLQGVLELSSSMGIQLKVERM 210
Query: 169 SVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYI-L 227
+++ LLK IK S +HI++DC + +L+Q E+ ++ Y +Y+ +
Sbjct: 211 V---------GSNHKALLKRIKTSGANHIVIDCRRETLPILLEQMLELQMLRSYFHYLFV 261
Query: 228 SLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRA 286
SL Y +N + N+TT+ M+N + + + M W + R ++ R
Sbjct: 262 SLDLYLLN-----MSRYTGDKVNLTTLHMLNLYDQLVEAFMAEWNAMQIGPRSVTMTTRN 316
Query: 287 ETV-KIEAALMYDAVYLFAAALQSLGERKPLP-TPLSC-ENPSSWQHGLGIGNLMKSITI 343
++ EAAL+YDAV + A L++LG + + LSC + W GL N ++S +I
Sbjct: 317 FSILTTEAALLYDAVSVVANGLEALGSTRNISLRSLSCFGEQAEWNDGLTFYNFLQSTSI 376
Query: 344 DGMTGRINLDSQTGRRNS--FSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE 401
+G+TG I D R N F E +E V +K +G W+ GLN +M +K
Sbjct: 377 NGLTGPITFDRNGERENPRFFISELMEQVG--FKTVGEWDEN-GLNIFPV--EMHTDKNS 431
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGELY-------GYSVDLIKMIANEL 452
N+TL +T+ PY M K+P+ GEL G+ +DL+ I+ +
Sbjct: 432 TFNNKTLIITT---------ILEPPYCMRRKSPD-GELLEGNARFEGFIIDLLDHISRYM 481
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
+F Y L + YG+ G+WNG++GEL E+RADLA LTI+ R +DF+ P+M
Sbjct: 482 SFNYIIKLVPDGDYGS-EISEGQWNGMVGELVERRADLAAAPLTISYAREKVIDFSKPWM 540
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LG++IL+R P + P +FSFL PLS DVW+Y+ A+L VS +LF LAR S
Sbjct: 541 YLGVTILFRVPEPQNPGVFSFLNPLSPDVWLYVILAFLLVSFVLFVLARFS 591
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A STR+++G WWFF+LI+ISSYTANLAAFLT RM PI+ +DLAK I+YG + G
Sbjct: 635 RAFSTRVLSGFWWFFSLILISSYTANLAAFLTVERMVSPIQTADDLAKQTSIEYGTRKGG 694
Query: 814 STRNFF 819
ST FF
Sbjct: 695 STEEFF 700
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCD-LM 633
S + Y +M M SSR VF + +G+++V+ + KYA+ MES +Y + ++C+ L
Sbjct: 703 SKIPTYMKMWEFM-SSRQHVFTNTYNDGIQQVLNNR-KYAYLMESAMADYVISQHCNNLT 760
Query: 634 QVGGLLDSKGYGIAMP 649
+GGLL+S+GYGI P
Sbjct: 761 AIGGLLNSRGYGIGTP 776
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 11/70 (15%)
Query: 672 PYMM--KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 722
PY M K+P+ GEL G+ +DL+ I+ ++F Y L + YG+ G+W
Sbjct: 447 PYCMRRKSPD-GELLEGNARFEGFIIDLLDHISRYMSFNYIIKLVPDGDYGS-EISEGQW 504
Query: 723 NGLIGELQEQ 732
NG++GEL E+
Sbjct: 505 NGMVGELVER 514
>gi|119625276|gb|EAX04871.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_g [Homo
sapiens]
Length = 803
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 204/689 (29%), Positives = 334/689 (48%), Gaps = 61/689 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKMVSP 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMES 589
+ S E LS + T + SGS + + S ++++ +M + M S
Sbjct: 535 IES-AEDLSKQTEIAYGT--------------LDSGSTKEF-FRRSKIAVFDKMWTYMRS 578
Query: 590 SRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCDLMQVGGLLDSKGYGIAM 648
+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD M+VGG LDSKGYGIA
Sbjct: 579 AEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIAT 638
Query: 649 PTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
P L + + A L++ QG +KN
Sbjct: 639 PKGSSL-RNAVNLAVLKLNEQGLLDKLKN 666
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL-QEQVDTFILFFIYS-----ILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTAN 779
+GEL + D I + ++ F F++ +S IMI
Sbjct: 485 VGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGIS-------------IMIKK---- 527
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+M PI++ EDL+K I YG ++ GST+ FF+
Sbjct: 528 ------PQKMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR 562
>gi|195385441|ref|XP_002051414.1| GJ15540 [Drosophila virilis]
gi|194147871|gb|EDW63569.1| GJ15540 [Drosophila virilis]
Length = 914
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 277/583 (47%), Gaps = 47/583 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF+ AV +N AL D+ LEPI +V DS+ L C+
Sbjct: 26 IKIGAIFFDTEMDLAEAFDAAVEEVN----ALTTDLKLEPIKHYVTVDDSIVLQDLSCDL 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT-NGVHGVNVYPESHL 119
G+AAI GP S +I+E +C M IPH++ W P + N +NV P +
Sbjct: 82 IGNGVAAILGPSSKTTSDIVEVLCNMTGIPHLQFDWHPQQSSRERLNHQLSINVAPSELI 141
Query: 120 ISKGISVIIND--MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
IS +S I+ DW +FTI YE +L LQ + K++ + + +++
Sbjct: 142 ISTALSDILRSKAFDWKSFTIAYERDTHLARLQHIFAW-----KQLH--KTGIKLQEFQ- 193
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DDYR L K I N+ E +LLDC D ++ + ++ G + N L+ ++ H
Sbjct: 194 RGDDYRILWKRINNAREKFVLLDCPSDILSDVINASISFNMTGSFNNLFLTN----LDTH 249
Query: 238 TVDFQDFQPG--YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
F + VR+ + P + ++ + + ++R SL+ + L
Sbjct: 250 VSGIDRFYSSKFTVAVAAVRIRSYIPPPVHDEIDVFDNDVDDRFASLSTQ---------L 300
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
+YDAV LF A+ L + TP WQ G + MK +T + T R+
Sbjct: 301 VYDAVVLFYNAVLQLSQHTGFYTPQFSCGRGFWQPGPHLVQQMKQLTPKQIKPPYKTQRL 360
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
L +Q G+R F+LE + D +V WN F L N ++ ++Q E KE
Sbjct: 361 QL-TQDGQREDFNLEVYNPIID--RVTHIWNKDFQLVDIDKIRENSTQALKQRRLENKED 417
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI +A E F + F
Sbjct: 418 FSQKPVRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYKLAEECKFDFNFEPV 477
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 478 RDNKYGSYDAATDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 537
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISS 564
K Q D++ FL P DVW+Y+ A L ++ L R+ S
Sbjct: 538 KQPPPQADIYGFLNPYGVDVWLYVMVAMLITAMALILAGRMDS 580
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV +G YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 703 MLSVKPDAFTKNNEEGVDRVKLSRGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 762
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G KL +G Y ++N
Sbjct: 763 AVPLNANFRSNLSVGILKLSE--RGVLYNLRN 792
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL+ WW F L++ +Y A LAAF+T+++M I ++ DL ++++G + G+T +
Sbjct: 628 RLLTAFWWIFALLISQTYIAKLAAFITSSKMTGNIASLHDLVDQNKVQFGTIRGGATSVY 687
Query: 819 F 819
F
Sbjct: 688 F 688
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI +A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 455 GYAVDLIYKLAEECKFDFNFEPVRDNKYGSYDAATDEWDGIIRQL 499
>gi|211938489|gb|ACJ13141.1| FI02084p [Drosophila melanogaster]
Length = 681
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 291/578 (50%), Gaps = 59/578 (10%)
Query: 1 MKIVGIFG--PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF P AF A+ R+N D K+L P+ ++ V++V +DS T + +C
Sbjct: 35 VRIGAIFSNQPGMYNSELAFRYAIHRLNMD-KSLLPETTVDYYVEYVNRFDSFETVQKVC 93
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPE 116
G+ A+F P I S+C DIP++ H +NVYP
Sbjct: 94 KLIRVGVQAVFSPTDSVLATHINSICDALDIPNI------------GRSAHDFSINVYPS 141
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
L++ + +I ++W F I++E + ++ L Q+ + H + V +RQ+
Sbjct: 142 KQLVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGE----------VHMRQVS 191
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D+ Y L E K +I++D + + +LK + M +Y+ + L TS+ +
Sbjct: 192 RDS--YVSALNEFKGKEIHNIIIDTNSNGISILLKNILQ-QQMNEYKYHYL-FTSF--DL 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNG-WIYEENERGR---SLNVRAETV-KI 291
T D +DF+ + NIT+ R+++ + ++ I+ +Y + + +L+++ T+ +
Sbjct: 246 ETYDLEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILES 305
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
E ALM+D+VY+FA LQ+L + L +SCE +SW GL + N + ++ G+TG I
Sbjct: 306 EPALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPI 365
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G+R F L+ ++ +G W LN + D N TL V
Sbjct: 366 QF--KDGQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSM----NVTLVV 419
Query: 411 TSKTFAKLRVLFQGEPYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENT 465
+ PY+M KN E YG+ VD+++ I+ E+ F Y L +
Sbjct: 420 ---------ITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 470
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+TG+WNG++ +L + +ADLA+ +TIT R + +DFT PFM LGISIL++ P
Sbjct: 471 YGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTS 530
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ LFSF+ PL+ ++W+Y+ AY VSL ++ + ++S
Sbjct: 531 EPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLS 568
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+++ W FF+LI+++SYTANLAAFLT RM PI+N EDLA I YG ++ GS
Sbjct: 613 AMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGS 672
Query: 815 TRNFFKV 821
T FF+V
Sbjct: 673 TMTFFRV 679
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++
Sbjct: 426 PYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMV 485
Query: 727 GELQE 731
+L +
Sbjct: 486 AQLMK 490
>gi|24638677|ref|NP_651931.1| CG9935, isoform A [Drosophila melanogaster]
gi|22759366|gb|AAF59326.3| CG9935, isoform A [Drosophila melanogaster]
Length = 669
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 291/578 (50%), Gaps = 59/578 (10%)
Query: 1 MKIVGIFG--PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF P AF A+ R+N D K+L P+ ++ V++V +DS T + +C
Sbjct: 23 VRIGAIFSNQPGMYNSELAFRYAIHRLNMD-KSLLPETTVDYYVEYVNRFDSFETVQKVC 81
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPE 116
G+ A+F P I S+C DIP++ H +NVYP
Sbjct: 82 KLIRVGVQAVFSPTDSVLATHINSICDALDIPNI------------GRSAHDFSINVYPS 129
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
L++ + +I ++W F I++E + ++ L Q+ + H + V +RQ+
Sbjct: 130 KQLVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGE----------VHMRQVS 179
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D+ Y L E K +I++D + + +LK + M +Y+ + L TS+ +
Sbjct: 180 RDS--YVSALNEFKGKEIHNIIIDTNSNGISILLKNILQQQ-MNEYKYHYL-FTSF--DL 233
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNG-WIYEENERGR---SLNVRAETV-KI 291
T D +DF+ + NIT+ R+++ + ++ I+ +Y + + +L+++ T+ +
Sbjct: 234 ETYDLEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILES 293
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
E ALM+D+VY+FA LQ+L + L +SCE +SW GL + N + ++ G+TG I
Sbjct: 294 EPALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPI 353
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G+R F L+ ++ +G W LN + D N TL V
Sbjct: 354 QF--KDGQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSM----NVTLVV 407
Query: 411 TSKTFAKLRVLFQGEPYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENT 465
+ PY+M KN E YG+ VD+++ I+ E+ F Y L +
Sbjct: 408 ---------ITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 458
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+TG+WNG++ +L + +ADLA+ +TIT R + +DFT PFM LGISIL++ P
Sbjct: 459 YGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTS 518
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ LFSF+ PL+ ++W+Y+ AY VSL ++ + ++S
Sbjct: 519 EPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLS 556
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 743 SILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKN 795
S F I TF+ + A+STR+++ W FF+LI+++SYTANLAAFLT RM PI+N
Sbjct: 582 SFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIEN 641
Query: 796 VEDLAKAGRIKYGCVEMGSTRNFFKV 821
EDLA I YG ++ GST FF+V
Sbjct: 642 AEDLASQTEISYGTLDSGSTMTFFRV 667
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++
Sbjct: 414 PYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMV 473
Query: 727 GELQE 731
+L +
Sbjct: 474 AQLMK 478
>gi|116007112|ref|NP_001036250.1| CG9935, isoform B [Drosophila melanogaster]
gi|112980801|gb|ABI29182.1| CG9935, isoform B [Drosophila melanogaster]
Length = 899
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 291/578 (50%), Gaps = 59/578 (10%)
Query: 1 MKIVGIFG--PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF P AF A+ R+N D K+L P+ ++ V++V +DS T + +C
Sbjct: 23 VRIGAIFSNQPGMYNSELAFRYAIHRLNMD-KSLLPETTVDYYVEYVNRFDSFETVQKVC 81
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPE 116
G+ A+F P I S+C DIP++ H +NVYP
Sbjct: 82 KLIRVGVQAVFSPTDSVLATHINSICDALDIPNI------------GRSAHDFSINVYPS 129
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
L++ + +I ++W F I++E + ++ L Q+ + H + V +RQ+
Sbjct: 130 KQLVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGE----------VHMRQVS 179
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D+ Y L E K +I++D + + +LK + M +Y+ + L TS+ +
Sbjct: 180 RDS--YVSALNEFKGKEIHNIIIDTNSNGISILLKNILQ-QQMNEYKYHYL-FTSF--DL 233
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNG-WIYEENERGR---SLNVRAETV-KI 291
T D +DF+ + NIT+ R+++ + ++ I+ +Y + + +L+++ T+ +
Sbjct: 234 ETYDLEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILES 293
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
E ALM+D+VY+FA LQ+L + L +SCE +SW GL + N + ++ G+TG I
Sbjct: 294 EPALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPI 353
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G+R F L+ ++ +G W LN + D N TL V
Sbjct: 354 QF--KDGQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSM----NVTLVV 407
Query: 411 TSKTFAKLRVLFQGEPYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENT 465
+ PY+M KN E YG+ VD+++ I+ E+ F Y L +
Sbjct: 408 ---------ITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 458
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+TG+WNG++ +L + +ADLA+ +TIT R + +DFT PFM LGISIL++ P
Sbjct: 459 YGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTS 518
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ LFSF+ PL+ ++W+Y+ AY VSL ++ + ++S
Sbjct: 519 EPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLS 556
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y+++ +M++ +PS F + ++G++RV +G YAF MEST
Sbjct: 656 LDSGSTMTF-FRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRV--NQGNYAFLMESTM 712
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLD+KGYGIA P S + K S +L+
Sbjct: 713 LDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQ 757
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 743 SILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKN 795
S F I TF+ + A+STR+++ W FF+LI+++SYTANLAAFLT RM PI+N
Sbjct: 582 SFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIEN 641
Query: 796 VEDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA I YG ++ GST FF+
Sbjct: 642 AEDLASQTEISYGTLDSGSTMTFFR 666
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++
Sbjct: 414 PYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMV 473
Query: 727 GELQE 731
+L +
Sbjct: 474 AQLMK 478
>gi|332018740|gb|EGI59305.1| Glutamate receptor, ionotropic kainate 2 [Acromyrmex echinatior]
Length = 855
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 281/582 (48%), Gaps = 69/582 (11%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCNATSE 63
IF EE + + F A+ + L +++ +++++E N DS TA C E
Sbjct: 3 AIFHKGEEHLQSVFSRAISDTKNENHELVFELV--AVIKYIEGNTDSFMTAIAACELLEE 60
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNK---YFIPTNGVHGVNVYPESHLI 120
G+AAIFGP S I+ S+ FDIPH+E W NK + + +N++P S +
Sbjct: 61 GVAAIFGPSSRYTSGIVASIAARFDIPHIEYVWRENKGKENQKKASSLMTINIFPASEQV 120
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ I +I M+W F IYET + L LQ+ L D + P + +
Sbjct: 121 SQAIVDVIKSMNWRKFAAIYETDEGLSRLQKTLILKGDKND------PIIHTAWKLDEGP 174
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DYR +LK+I+ +I++D + + +L Q KEV L+ DY +++++ I
Sbjct: 175 DYRSMLKQIRYLPVRNIIIDVKPENIMKVLHQTKEVGLLSDYSDFVITYLDSSI------ 228
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+ V MIN T+ I G EN + ++ +++A++YDAV
Sbjct: 229 ----------LPIVEMINDTSNII-----GLSIRENNDIKGID------SLDSAVLYDAV 267
Query: 301 YLFAAALQSLGERKPL--------PTPLSCENPSSWQHGLGIGNLMKSITIDG-MTGRIN 351
+L AL++L R P PLSC N +Q G I N+M+ I+ G +TG +
Sbjct: 268 FLLHTALKTLNTRNIENEVDIFIDPIPLSCTNTRKYQVGPNITNIMREISKRGKITGIMY 327
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHS-RTVEQMDKEKKEKIENRTLTV 410
+D + GRR F++ + + K W+ GL+ + T+E+ K E+R L +
Sbjct: 328 ID-ENGRRQDFNVTILNFRQLNIKETSYWDCN-GLHETPLTLEEDIYLYKRFTEDRILKI 385
Query: 411 TSKTFAKLRVLFQGEPYMMK---NPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
+ A PY+M+ G L G Y +DLI +IA L F
Sbjct: 386 SVTINA---------PYIMEVIDGSTRGVLIGQKRYEGYCIDLINLIAKFLGFKNVVFQL 436
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG+ N +T KWNGLI + + AD AI DLTITS R + VDF++PFM G SI+
Sbjct: 437 VTDGYGSYNSETRKWNGLIRSILDYEADFAISDLTITSHRASVVDFSLPFMISGFSIIIS 496
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K+ F L P S +VW+ MA A L VS++LF AR++
Sbjct: 497 KPEKQTSSFFPVLIPFSIEVWLSMAIACLVVSIMLFLQARMA 538
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y+++ AME+S+PSVF S +EG+ RV+ +G+YAF MES IEY E+ C+L+++G +
Sbjct: 649 YKQIWIAMENSKPSVFTSSYEEGINRVIHGEGRYAFLMESGAIEYITERECNLIKIGSVF 708
Query: 640 DSKGYGIAMP 649
+++GYGIAMP
Sbjct: 709 ENRGYGIAMP 718
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A S R++A MWWFFTLIM SSYTAN AAFL +++ +K +EDL K +IKYG ++ G
Sbjct: 578 KASSLRILASMWWFFTLIMYSSYTANQAAFLNMDKIS--VKGIEDLPKQTKIKYGALKNG 635
Query: 814 STRNFFK 820
+T FF+
Sbjct: 636 ATATFFQ 642
>gi|321465367|gb|EFX76369.1| hypothetical protein DAPPUDRAFT_55388 [Daphnia pulex]
Length = 866
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 288/567 (50%), Gaps = 39/567 (6%)
Query: 5 GIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATS 62
GIF ++++ + AF+ AV R+N++ + + P+ L +Q+V DS T+K C
Sbjct: 2 GIFREDQKDGSAELAFKYAVYRLNRE-RTILPNTTLVYDIQYVPRDDSFRTSKKACKQID 60
Query: 63 EGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISK 122
G+ AIFGP ++S+C DIPH+E D N + +N++P +++
Sbjct: 61 FGVQAIFGPSDPVLGPHVQSICDALDIPHLETRLDLESRTSARNEL-SINLHPSQEVLNA 119
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
++ ++W IIYE L+ LQ ++ + E+ IRQ +T Y
Sbjct: 120 AYKDLMRFLNWTKVAIIYEDEGGLLRLQDLVRSPPTSKMEVH-------IRQGTVNT--Y 170
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQ 242
R +L+EIK ++I++D + + ++ M DYQ + L + + T D +
Sbjct: 171 RQVLREIKQRDINNIIVDTRTEHVHIFFRAVLQLQ-MNDYQYHYLFASP---DLETFDLE 226
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYL 302
DF+ + NI+ R+++ + R ++ + + G+S+ ++ ++ E AL+YD+V
Sbjct: 227 DFKYNFVNISAFRIVDAESNFTRQLLRD-MEKFQPIGQSILNKSNIIQAEPALVYDSVMA 285
Query: 303 FAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNS 361
A L +L L LSC+ W G + N + ++ G+TG I + GRR++
Sbjct: 286 LAHGLAALDRGTALRLANLSCDIEQPWNDGSSLFNYINTVEFVGLTGPIRF--KEGRRSN 343
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
+L+ ++ + +G WN GLN + V + N TL V +
Sbjct: 344 ITLDLLKLKRENLTKVGEWNGQSGLNITDPVAFYEGSTP----NITLIVMTN-------- 391
Query: 422 FQGEPYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
+ PY+M +N + Y G+ +DL+K IA + F Y + + YG L+P+TG+W
Sbjct: 392 -EEMPYVMLRSERNLTGNDRYEGFCIDLLKAIAGMVGFNYVIEMVPDKKYGALDPETGEW 450
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEP 536
NG++ ++ E++ADLA+ +TI R +DFT PFM LGISIL++ P + LFSF+ P
Sbjct: 451 NGVVRQILEKKADLAVGSMTINYAREMVIDFTKPFMNLGISILFKIPTSQPTRLFSFMNP 510
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARIS 563
L+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 511 LAVEIWLYVMAAYILVSFTLFVMARFS 537
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP + + E Q +
Sbjct: 509 NPLAVEIWLYVMAAYILVSFTL-----FVMARFSPYEWNNPHPCNGDSDVVENQFSISNS 563
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI +V
Sbjct: 564 FWFITGTFLRQGSGLNPKAASTRIVGGIWWFFTLIIISSYTANLAAFLTVERMIAPIDSV 623
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA I YG +E GST FF+
Sbjct: 624 EDLADQSDISYGTLEAGSTMTFFR 647
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ +GS + + ++S + YQ+M MES +PSVFV + +EG +RV++ G +AF MEST
Sbjct: 637 LEAGSTMTF-FRDSRIETYQKMWRYMESKKPSVFVSTYEEGTKRVME--GNFAFLMESTT 693
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
++Y V++NC+L Q+GGLLDSKGYGI P
Sbjct: 694 LDYVVQRNCNLTQIGGLLDSKGYGIGTP 721
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 672 PYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M +N + Y G+ +DL+K IA + F Y + + YG L+P+TG+WNG++
Sbjct: 395 PYVMLRSERNLTGNDRYEGFCIDLLKAIAGMVGFNYVIEMVPDKKYGALDPETGEWNGVV 454
Query: 727 GELQEQ 732
++ E+
Sbjct: 455 RQILEK 460
>gi|195354407|ref|XP_002043689.1| GM26773 [Drosophila sechellia]
gi|194128877|gb|EDW50920.1| GM26773 [Drosophila sechellia]
Length = 899
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 282/560 (50%), Gaps = 57/560 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF A+ R+N D K+L P+ ++ V++V +DS T + +C G+ A+F P
Sbjct: 41 AFRYAIHRLNMD-KSLLPETTVDYYVEYVNRFDSFETVQKVCKLIQVGVQAVFSPTDSVL 99
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPESHLISKGISVIINDMDWD 134
I S+C DIP++ H +NVYP ++ + +I ++W
Sbjct: 100 ATHINSICDALDIPNI------------GRSAHDFSINVYPSKQYVNYAFNDVIQYLNWT 147
Query: 135 TFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSE 194
F I++E + ++ L Q+ + H + V +RQ+ D+ Y L E K
Sbjct: 148 RFGILHEKENGIINLHQLSRSFHGE----------VHMRQVSRDS--YVSALNEFKGKEI 195
Query: 195 SHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTV 254
+I++D + + +LK + M +Y+ + L TS+ + T D +DF+ + NIT+
Sbjct: 196 HNIIIDTNSNGISILLKTILQ-QQMNEYKYHYL-FTSF--DLETYDLEDFKYNFVNITSF 251
Query: 255 RMINPTNPHIRSIMN--GWIYEENERGRSLNV---RAETVKIEAALMYDAVYLFAAALQS 309
R+++ + ++ I+ G + LN+ ++ ++ E ALM+D+VY+FA LQ+
Sbjct: 252 RLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHFTKSTVLESEPALMFDSVYVFAIGLQT 311
Query: 310 LGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + L + +SCE +SW GL + N + ++ G+TG I + G+R F L+ ++
Sbjct: 312 LEQSHSLTLSNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQF--KDGQRVQFKLDLIK 369
Query: 369 YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM 428
+G W LN + D N TL V + PY+
Sbjct: 370 LKQHSIVKVGEWTPHGHLNITEPSMFFDAGSM----NVTLVV---------ITILETPYV 416
Query: 429 M----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++ +L
Sbjct: 417 MMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQL 476
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
+ +ADLA+ +TIT R + +DFT PFM LGISIL++ P + LFSF+ PL+ ++W+
Sbjct: 477 MKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWI 536
Query: 544 YMATAYLGVSLLLFFLARIS 563
Y+ AY VSL ++ + ++S
Sbjct: 537 YVLIAYFLVSLCIYIVGKLS 556
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y+++ +M++ +PS F + ++G++RV +G YAF MEST
Sbjct: 656 LDSGSTMTF-FRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRV--NQGNYAFLMESTM 712
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLD+KGYGIA P S + K S +L+
Sbjct: 713 LDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQ 757
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 743 SILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKN 795
S F I TF+ + A+STR+++ W FF+LI+++SYTANLAAFLT RM PI+N
Sbjct: 582 SFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIEN 641
Query: 796 VEDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA I YG ++ GST FF+
Sbjct: 642 AEDLASQTEISYGTLDSGSTMTFFR 666
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++
Sbjct: 414 PYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMV 473
Query: 727 GELQE 731
+L +
Sbjct: 474 AQLMK 478
>gi|345321400|ref|XP_001519062.2| PREDICTED: glutamate receptor, ionotropic kainate 1-like, partial
[Ornithorhynchus anatinus]
Length = 532
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 260/512 (50%), Gaps = 46/512 (8%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N EE+A F+ AV +N++ + L P+ L +Q + +DS ++ C+ + G+AA+F
Sbjct: 53 NAEEMA--FKFAVANVNRN-RTLMPNTTLTYDLQRINPFDSFEASRRACDQLALGVAALF 109
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFW-----DPNKYFIPTNGVHGVNVYPESHLISKGI 124
GP + ++S+C ++PH++ W D F VN++P+ IS+ +
Sbjct: 110 GPSHGSAVSAVQSVCNALEVPHIQTRWKHPSADARDLFY-------VNLHPDFSAISRAV 162
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
++ +W TI+YE L+ LQ++++ + +IR IRQLP D RP
Sbjct: 163 LDLVLYYNWKAVTIVYEDSTGLLRLQELIKAPSRYNIKIR-------IRQLPAANKDARP 215
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
LLKE+K + E +++ DCS + +LKQ + +M +Y +Y + ++ +D + +
Sbjct: 216 LLKEMKKAKEFYVIFDCSRETAADVLKQILSMGMMTEYYHYFFTT----LDLFALDLEPY 271
Query: 245 QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSL--NVRAETVKIEAALMYDAVYL 302
+ N+T +R++N +P + ++++ W E +L + + EAALMYDAV++
Sbjct: 272 RYCGVNVTGLRLLNVDHPQVSALVDRWPVERLRAPPTLETGLLDGMMTTEAALMYDAVHV 331
Query: 303 FAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
A ALQ + + L C W G NL+K + +G+TGRI + G R F
Sbjct: 332 VAVALQRAAQVAV--SSLQCHRHRPWHSGPKFMNLIKEVRWNGLTGRIAFNKTDGLRRDF 389
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
L+ + D + +G WN+ GLN + + + + NRTL VT+
Sbjct: 390 DLDVISLKEDGTEKIGIWNSRRGLNVTDRDDDRTTNVTDSLANRTLVVTT---------I 440
Query: 423 QGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
+PY+M LY GY +DL+K ++N L FTY+ L + YG N + G+W
Sbjct: 441 LEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFTYEVKLVSDGKYGAQNDK-GEW 499
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFT 508
NG++ EL + +ADLA+ LTIT R +DF+
Sbjct: 500 NGMVKELVDHKADLAVAPLTITYVREKVIDFS 531
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M LYG Y +DL+K ++N L FTY+ L + YG N + G+WNG
Sbjct: 443 DPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFTYEVKLVSDGKYGAQNDK-GEWNG 501
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 502 MVKELVDH 509
>gi|195030677|ref|XP_001988194.1| GH11035 [Drosophila grimshawi]
gi|193904194|gb|EDW03061.1| GH11035 [Drosophila grimshawi]
Length = 915
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 177/583 (30%), Positives = 277/583 (47%), Gaps = 47/583 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E +A AF+ A+ +N AL PD+ LEPI ++ DS+ L C+
Sbjct: 26 IKIGAIFFDTEMNLAAAFDAAIEEVN----ALSPDLQLEPIKHYITVDDSIVLQDLSCDL 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT-NGVHGVNVYPESHL 119
G+AAI GP S +I+E +C M IPH++ W P + N +NV P +
Sbjct: 82 IGNGVAAILGPSSKTTSDIVEVLCNMMGIPHLQFDWHPQQSSRERLNHQLTINVAPSELI 141
Query: 120 ISKGISVIIND--MDWDTFTIIYETHDNLVYLQQVL--ENAHDDDKEIRPGRPSVTIRQL 175
+S G++ I+ DW +FTI YE + Q + H + + +++
Sbjct: 142 LSMGLADILRSKAFDWKSFTIAYERDAHFARFQHIFAWRQLH---------KTGIKLQEF 192
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
DDYR L K I N+ E +LLDC D V ++ + ++ G + N L+ ++
Sbjct: 193 Q-RGDDYRILWKRINNAREKFVLLDCPSDILVDVVNASIAFNMTGSFNNLFLTN----LD 247
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
H F Y+ TV + IRS + +++E + + + + + L
Sbjct: 248 THVSGIDRF---YSREFTVAV---AAVRIRSYIPPPLHDETDVFDN-EIDDRFISLSTQL 300
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
+YDA+ LF A+ L +R TP WQ G + MK +T + T R+
Sbjct: 301 VYDAIVLFYNAVLLLSQRTGFYTPQFSCGRGFWQPGPHLVQQMKELTPKQIKPPYKTQRL 360
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
L + G+R F+L+ + D +V WN F L N ++ ++Q +E KE
Sbjct: 361 QL-TADGQREDFNLDVYNPIID--RVTHIWNKEFQLVDYDKIRENSTQALKQRRQENKED 417
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDL+ +A E F ++F
Sbjct: 418 FSQKPVRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLLYKLAEECKFDFEFEPV 477
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 478 RDNKYGSYDASTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 537
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISS 564
K Q D++ FL P DVW+Y+ A L ++ L R+ S
Sbjct: 538 KQPPPQADIYGFLNPYGVDVWLYVMVAMLISAMALVVAGRMDS 580
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV +G YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 703 MLSVKPDAFTKNNEEGVDRVKLSRGTYAFLMETTNLQYYVQRNCELTQLGDSFGEKHYGI 762
Query: 647 AMP-TSKFLAKFSFGFAKL 664
A+P + F + S G KL
Sbjct: 763 AVPLNANFRSNLSVGILKL 781
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+ RL+ WWFFTL++ +Y A LA+FLT++++ I+++ DL ++++G + G
Sbjct: 623 RALPMRLLTAFWWFFTLLISQTYIAKLASFLTSSKLTGGIESLHDLIDQNKVQFGTIRGG 682
Query: 814 STRNFF 819
+T +F
Sbjct: 683 ATSVYF 688
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDL+ +A E F ++F R+N YG+ + T +W+G+I +L
Sbjct: 455 GYAVDLLYKLAEECKFDFEFEPVRDNKYGSYDASTDEWDGIIRQL 499
>gi|195116404|ref|XP_002002745.1| GI17554 [Drosophila mojavensis]
gi|193913320|gb|EDW12187.1| GI17554 [Drosophila mojavensis]
Length = 914
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 280/588 (47%), Gaps = 61/588 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF +E +A AF+ V +N AL P++ LE I +V DS+ L C+
Sbjct: 26 IKIGAIFFDSEMALAEAFDAVVEEVN----ALMPELQLETIKHYVTIDDSIVLQDLSCDM 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT-NGVHGVNVYPESHL 119
G+AAI GP S +I+E +C M IPH++ W P + N +NV P +
Sbjct: 82 IGNGVAAILGPSSKTTSDIVEVLCNMTGIPHLQFDWHPQQSARERLNHQLTINVAPSELI 141
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
IS +S I+ + DW +FTI YE +L LQ + K++ + + +++
Sbjct: 142 ISTALSDILRSKEFDWKSFTIAYERDTHLARLQHIFAW-----KQLH--KTGIKLQEFQ- 193
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DDYR L K I N+ E +LLDC D V ++ + ++ G N L+ +N H
Sbjct: 194 RGDDYRILWKRISNAREKFVLLDCPPDILVDVINASIGFNMTGSLNNLFLTD----LNTH 249
Query: 238 TVDFQDF--QPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T F + ++ VR+ + P + + + YE + R SL+ + L
Sbjct: 250 TSRIDQFYSREFSVSVKAVRIRSYVPPPVHDETDVFDYEVDNRFSSLS---------SQL 300
Query: 296 MYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
+YDAV LF A+ L ++ TP WQ G + MK +T + T R+
Sbjct: 301 VYDAVVLFYNAVLQLSQKPGFYTPQFSCGRGFWQPGPLLVQQMKELTPKQVKPPYKTQRL 360
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
L + G+R F+LE + D W V WN F L N ++ ++Q E KE
Sbjct: 361 QL-TPDGQREDFNLEVYNPIID-W-VTHIWNKDFQLVDYETIRENSTQAMKQRRLENKED 417
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYM--MKNPE------TGELYGYSVDLIKMIANELNF 454
+ + T T RV G+PY K PE GY+VDLI +A E F
Sbjct: 418 FSRKPVVYTVAT----RV---GKPYFSWRKEPEGVHFEGNERFEGYAVDLIYELARECKF 470
Query: 455 TYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTL 514
+ F R+N YG+ + T +W+G+I +L + A + ICDLTIT RR VDFT+PFM L
Sbjct: 471 DFVFEPVRDNKYGSYDAATDEWDGIIRQLIDNNAQIGICDLTITQARRTVVDFTVPFMQL 530
Query: 515 GISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
GISIL K Q D++ FL P DVW+Y+ A L ++ L R+
Sbjct: 531 GISILSYKQPPAQADIYGFLNPYGVDVWLYVMVAMLVTAMALILAGRM 578
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV +G YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 703 MLSLKPDAFTKNNEEGVDRVKVSRGTYAFLMETTNLQYHVQRNCELTQIGESFGEKHYGI 762
Query: 647 AMP-TSKFLAKFSFGFAKLR---VLFQGEPYMMKNPET 680
A+P + F + S G KL VL+ + N ET
Sbjct: 763 AVPLNAHFRSNLSVGILKLSERGVLYNLKSKWFNNNET 800
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL+ WW F L++ +Y A+LAAF+T+++M I ++ DL ++K+G + G+T +
Sbjct: 628 RLLTAFWWIFALLISQTYIASLAAFITSSKMTGNIASLHDLIDQNKVKFGTIRGGATSVY 687
Query: 819 F 819
F
Sbjct: 688 F 688
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYM--MKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G+PY K PE GY+VDLI +A E F + F R+N YG+ + T +
Sbjct: 432 GKPYFSWRKEPEGVHFEGNERFEGYAVDLIYELARECKFDFVFEPVRDNKYGSYDAATDE 491
Query: 722 WNGLIGEL 729
W+G+I +L
Sbjct: 492 WDGIIRQL 499
>gi|158295188|ref|XP_316066.4| AGAP006027-PA [Anopheles gambiae str. PEST]
gi|157015915|gb|EAA11672.5| AGAP006027-PA [Anopheles gambiae str. PEST]
Length = 967
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 173/614 (28%), Positives = 305/614 (49%), Gaps = 87/614 (14%)
Query: 1 MKIVG-IFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
M ++G IF +E+ +AF+ A+ +N + L+ V + D+ +KL+CN
Sbjct: 1 MALLGAIFEQGTDEIQSAFKFAM--LNHNLNVTARRFELQAYVDVINTADAFKLSKLICN 58
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPES 117
S G+ A+ G S ++ + + S F +P V W P K P++G +++ P+
Sbjct: 59 QFSRGVFAMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGFLDFAISMRPDY 117
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV---TIRQ 174
+ + I + WD +Y++HD L+ LQQ+ + +RPG + T+++
Sbjct: 118 Y---QAIIDTVRYYGWDRIIYMYDSHDGLLRLQQIYQG-------LRPGNETFHVETVKR 167
Query: 175 LP--PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS--- 228
+ D ++ ++E+ S HI+LDCS + I+ +++ L +Y+LS
Sbjct: 168 IANVSDAIEFLRTIEELNRWSRKHIVLDCSTELAKDIVVSHVRDITLGKRTYHYLLSGLV 227
Query: 229 LTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET 288
+ W + +++ G NIT R+++ + +++ ++GW + + S E
Sbjct: 228 MDDRW-ESEVIEY-----GAINITGFRIVDTSKKYVKEFLDGW--KRLDPTTSQGAGKEL 279
Query: 289 VKIEAALMYDAVYLFAAALQSLGERKP----------------LPT----PLSCENP--- 325
+ +AALMYDAV++ A + +KP LP L C
Sbjct: 280 ISAQAALMYDAVFVLVEAFSKIMRKKPDQFRAYTMRNRGQPFNLPANGTRTLDCNTSKGW 339
Query: 326 -SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTA 383
+ W+HG I ++ + I G+TG I + + G+R +++L VE + V + W+
Sbjct: 340 VTPWEHGDKISRYLRKVEISGLTGDIRFN-EDGKRQNYTLHVVEMTVNSAMVKVAEWSDE 398
Query: 384 FGL-----NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY-MMKNPETGE- 436
GL ++R M E+ N+T VT+ EPY M++ PE GE
Sbjct: 399 GGLAPVVAKYTRLKTDMHYER-----NKTYIVTT---------IIEEPYIMLRQPEPGET 444
Query: 437 ------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRAD 489
GY DL +++A +L Y+ + ++ YG+ NP G W+G++GEL + AD
Sbjct: 445 LETNERFEGYCKDLAELVAKKLGINYELRIVKDGQYGSENPDVKGGWDGMVGELVRKEAD 504
Query: 490 LAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAY 549
AI +TITSER +DF+ PFM+LGISI+ ++P K++P +FSFL PLS ++WV + +Y
Sbjct: 505 FAIAPMTITSERERVIDFSKPFMSLGISIMIKRPVKQKPSVFSFLNPLSKEIWVCVLFSY 564
Query: 550 LGVSLLLFFLARIS 563
+GVS++L+ ++R S
Sbjct: 565 VGVSIVLYIVSRFS 578
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA ++YG + G
Sbjct: 685 RSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVTPINSPEDLASQTEVQYGTLIHG 744
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 745 STWDFFR 751
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S +SLY RM M +SR +FVKS EG+ RV KGKYA +ES EY E+ CD
Sbjct: 751 RKSQISLYSRMWEYM-NSRKHLFVKSYDEGIRRVRTSKGKYALLIESPKNEYTNEREPCD 809
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+GIA P
Sbjct: 810 TMKVGRNLDAKGFGIATP 827
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 671 EPY-MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY M++ PE GE GY DL +++A +L Y+ + ++ YG+ NP G
Sbjct: 431 EPYIMLRQPEPGETLETNERFEGYCKDLAELVAKKLGINYELRIVKDGQYGSENPDVKGG 490
Query: 722 WNGLIGELQEQVDTFIL 738
W+G++GEL + F +
Sbjct: 491 WDGMVGELVRKEADFAI 507
>gi|195387437|ref|XP_002052402.1| GJ17530 [Drosophila virilis]
gi|194148859|gb|EDW64557.1| GJ17530 [Drosophila virilis]
Length = 757
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 280/558 (50%), Gaps = 52/558 (9%)
Query: 16 TAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIE 75
AF+ AV R+N D K++ PD L +Q++ DS + +CN G+ AIF P
Sbjct: 16 VAFQYAVHRLNHD-KSVLPDTDLVHHIQYIAK-DSFEAVQKVCNLIEGGVQAIFSPTDSF 73
Query: 76 NRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDT 135
I S+C DIP + K+ +NV+P I++ +I ++W
Sbjct: 74 LATHINSICDDLDIPDIGISRSAQKF--------SINVHPSQQHINRAFIDVIRYLNWTR 125
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
F I+YE ++ L Q R V IRQ+ P + Y +L E KN+
Sbjct: 126 FGILYEKDHGILVLNQFS----------RSIEAEVHIRQVSPGS--YLSVLHEFKNNEIH 173
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
+IL+D + +LK + M +Y+ + TS+ + D +DF+ + NIT+ R
Sbjct: 174 NILIDTNSAGISILLKNILQ-QQMNEYKFHYF-FTSF--DLENFDLEDFKYNFVNITSFR 229
Query: 256 MINPTNPHIRSIMNGW-IYEENERGRSLNV----RAETVKIEAALMYDAVYLFAAALQSL 310
+++ + ++ I+ G +++ R+ + + +++ EAALM+D+VY+FA LQS+
Sbjct: 230 LVDMGDVAVKEILKGMELFDIGNLNRNESTYKYKKTVSIQTEAALMFDSVYVFAIGLQSM 289
Query: 311 GERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYV 370
L + L+C++ W GL + N + ++ G+TG I + G+R F L+ ++
Sbjct: 290 HPLIHL-SNLTCDDEVPWNGGLSLINYINAVEWKGLTGPIQF--KDGQRIQFKLDLIKLK 346
Query: 371 SDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM- 429
+G W LN + D N TL V + PY+M
Sbjct: 347 QHSIVKVGEWTPQDHLNITEPSLFFDAGSM----NVTLVV---------ITILETPYVMM 393
Query: 430 ---KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 485
KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++ +L +
Sbjct: 394 RYGKNYTGNERFYGFCVDILETISHEVGFDYILDLVPDRKYGAKDPETGQWNGMVAQLMK 453
Query: 486 QRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYM 545
+ADLA+ +TIT R + +DFT PFM LGISIL + P + LFSF+ PL+ ++W+Y+
Sbjct: 454 YKADLAVGSMTITYARESVIDFTKPFMNLGISILLKVPTTEPTRLFSFMNPLAIEIWIYV 513
Query: 546 ATAYLGVSLLLFFLARIS 563
AYL VSL ++ LA++S
Sbjct: 514 LAAYLLVSLTIYLLAKLS 531
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+++ +W FF+LI+++SYTANLAAFLT RM PI+N EDLA I YG +E GS
Sbjct: 576 AASTRIISSVWGFFSLIIVASYTANLAAFLTVERMINPIENAEDLASQTEISYGTLESGS 635
Query: 815 TRNFFK 820
T FF+
Sbjct: 636 TMTFFR 641
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F + I+++++ K +++VG I P S F S + +
Sbjct: 330 FKDGQRIQFKLDLIKLKQHSIVKVGEWTPQDHLNITEP-SLFFDAGSMNVTLVVITILET 388
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++
Sbjct: 389 PYVMMRYGKNYTGNERFYGFCVDILETISHEVGFDYILDLVPDRKYGAKDPETGQWNGMV 448
Query: 727 GELQE 731
+L +
Sbjct: 449 AQLMK 453
>gi|241843898|ref|XP_002415471.1| EAA5, putative [Ixodes scapularis]
gi|215509683|gb|EEC19136.1| EAA5, putative [Ixodes scapularis]
Length = 808
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 269/536 (50%), Gaps = 49/536 (9%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
CN S G+AAIFGP I+S+ DIPH+E+ D P VN++P+
Sbjct: 1 CNLISSGVAAIFGPNDPMIGAHIQSLSDSLDIPHIESRLD----LEPDAKDCSVNLHPDP 56
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
H+ K + +++ ++W ++Y+ +L+ LQ++ +RP P ++ L
Sbjct: 57 HITGKSMRDLVDYLNWTRIAVLYQDDISLISLQEL----------VRPFPPK-NVQYLFR 105
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+++ L +IK+ +++D + L+ ++ M DY+ Y +Y I A+
Sbjct: 106 RAENFTATLMDIKSRGIYSMIIDVRPENLTAFLRAILQIQ-MNDYK-YHYHFATYDIEAY 163
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+ +DFQ + NIT RM++ N +R IM + + G+++ R + E ALM+
Sbjct: 164 --NLEDFQYNFVNITAYRMVDSDNQTVRHIMKD-MEKFQPFGQNILNRTNVIITEPALMF 220
Query: 298 DAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
DAVY FA L L L P +SCE+ SW G + NL+ + G+TG I +
Sbjct: 221 DAVYAFAHGLNDLQRSTTLRPANVSCEDEVSWTEGTSLFNLISMVDFYGLTGNIRFNE-- 278
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R S L+ ++ + + +G W+T GLN + + N TL VT+
Sbjct: 279 GNRTSLKLDLLKLRQNFLEKVGEWSTNDGLN----ITNHNAFHDFGTSNITLRVTT---- 330
Query: 417 KLRVLFQGEPYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
+ PY+M KN + + G+ +DL++ IA+ L F Y+ L + +G N
Sbjct: 331 -----IESRPYVMMKDNKNLTGNDRFDGFCIDLLRTIADLLGFNYELYLVPDKKFGVENT 385
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
TG+WNG++ E+ ++ ADLA+ +TI R + +DFT PFM LGI IL+ P+ LF
Sbjct: 386 STGEWNGMVREIIDKNADLAVAPMTINYARESVIDFTKPFMNLGIGILFMLPSGMPVKLF 445
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRL-------RYSAKNSNVSLY 580
SF+ PL D+W+Y+ AY+ VS +F +AR S G++ RY+ + V LY
Sbjct: 446 SFMSPLDVDIWLYVLAAYILVSFTMFIVAR-SDGAKTSRTKKSRRYTEPQTRVLLY 500
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V +WWFFTLI+ISSYTANLAAFLT RM PI++VEDLA+ +I YG ++ G
Sbjct: 522 KAMSTRIVGTIWWFFTLILISSYTANLAAFLTVERMITPIESVEDLAEQSKIAYGTLDSG 581
Query: 814 STRNFFK 820
ST FF+
Sbjct: 582 STMTFFR 588
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 71/105 (67%), Gaps = 5/105 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + YQ+M ME+ RP+VFV + ++GV RV++ G YAF MEST
Sbjct: 578 LDSGSTMTF-FRDSKIETYQKMWRYMEN-RPTVFVSTYEDGVARVLQ--GNYAFLMESTM 633
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
+++ V+++C+L QVGGLLDSKGYGIA P S + K S L+
Sbjct: 634 LDFMVQRDCNLTQVGGLLDSKGYGIATPMGSPWRDKISLAILDLQ 678
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 664 LRVL-FQGEPYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNP 717
LRV + PY+M KN + + G+ +DL++ IA+ L F Y+ L + +G N
Sbjct: 326 LRVTTIESRPYVMMKDNKNLTGNDRFDGFCIDLLRTIADLLGFNYELYLVPDKKFGVENT 385
Query: 718 QTGKWNGLIGELQEQ 732
TG+WNG++ E+ ++
Sbjct: 386 STGEWNGMVREIIDK 400
>gi|427793845|gb|JAA62374.1| Putative glutamate receptor, partial [Rhipicephalus pulchellus]
Length = 960
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 175/579 (30%), Positives = 294/579 (50%), Gaps = 53/579 (9%)
Query: 9 PNEEEVATAFEIAVRRINKDFKALPPDIILEPI---VQHVENYDSLHTAKLMCNATSEGI 65
P E+ + T A+ R++ + A P++ E I + + D L + K +C +G+
Sbjct: 87 PEEQRLLTQ---ALERVSLNISA-SPNVAAENISLAAVRLNSEDILRSVKKLCGLLEQGV 142
Query: 66 AAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN-KYFIPTNGVHGVNVYPESHLISKGI 124
A+ P E +++ + C I H A D + ++ I + V + + P +SK +
Sbjct: 143 LAVLAPLQPETSSLVRTACFRHRIAHFYAHRDEDTQWRIAPDSV-SITLSPSPVELSKAL 201
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
++ W FT+IYE + LV L+ +L D ++ P V++R L +D RP
Sbjct: 202 QDLVEAQRWTHFTVIYERPEALVRLRGLLNLRSSSDGKLLP----VSLRLLAAK-EDPRP 256
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDF 244
LL+EI S +S+++LD ++ +L+ A+++ L+ +Y +YI++ + HT+D F
Sbjct: 257 LLREIAYSGDSNVVLDLCAERLAEVLRVAQKMGLITEYHSYIVTTLQ---DMHTLDLTHF 313
Query: 245 QPGYANITTVRMINPT--NPHIRSIMNGWIYEE------NERGRSLNVRAETVKIEAALM 296
N T ++N I ++ + ++ +R ++R +AAL
Sbjct: 314 LNSGTNFTGFELLNRELWEQDIGAVREAYAHKGLYPIFLGQRPSRNHMRT-----DAALA 368
Query: 297 YDAVYLFAAALQSLGERKPLPTP--LSCE---NPSSWQHGLGIGNLMKSITIDGMTGRIN 351
DAV L ++SL L P + C + ++W+ + N ++ G+TG I
Sbjct: 369 QDAVNLLLRGVRSLAATGNLSRPPIVRCRGEHSSAAWEQSNRLVNAVRKTPFSGLTGPIW 428
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
LD GRR + SL V+ +GTW+ + GL +RT + +E + N+T +T
Sbjct: 429 LDP-LGRRRNVSLHVVKLKRRGLTAVGTWSLSSGLLITRTEKAFQEEVLSSLRNKTFRIT 487
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENT 465
+ A PYMM +L G+ VDL++ I+ L F Y+ L R+
Sbjct: 488 TILNA---------PYMMLKSSAHKLRANDRFEGFCVDLLREISQHLGFRYRIKLVRDGA 538
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
+GT + Q G+WNG++ EL ++ ADLA+ D+TITS R AVDFT+PFMTLG+SIL+RK +
Sbjct: 539 HGTRDAQ-GRWNGMVRELIDREADLAVGDITITSAREEAVDFTLPFMTLGVSILFRKNQE 597
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISS 564
+ LF FL PLS DVW+ +A A++ +SLLL + R+ S
Sbjct: 598 EHSLLF-FLSPLSVDVWLCVAAAHVVISLLLCCVTRVQS 635
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F I SI+ + + ST +++ WW F+ +++SSYTANLA+FLT R+ PI++VED
Sbjct: 719 FTISSIMQQGCEPLPRSTSTCIISATWWLFSFVLVSSYTANLASFLTRERLKSPIESVED 778
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK I+YGC+ GST+ FF+
Sbjct: 779 LAKQSEIRYGCLRSGSTQAFFQ 800
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 7/97 (7%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y+RM AM V SN +GV RV ++G YAF MEST IEY V++ C L Q+GGLL
Sbjct: 807 YERMWHAMRHD----LVPSNAKGVTRV--QRGGYAFLMESTSIEYVVQRQCQLTQIGGLL 860
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
D+KGYGIA+P F F A LR+ G +M+K
Sbjct: 861 DTKGYGIALPPGSPYRSF-FSSAILRLQENGTLHMLK 896
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 672 PYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PYMM +L G+ VDL++ I+ L F Y+ L R+ +GT + Q G+WNG+
Sbjct: 493 PYMMLKSSAHKLRANDRFEGFCVDLLREISQHLGFRYRIKLVRDGAHGTRDAQ-GRWNGM 551
Query: 726 IGEL 729
+ EL
Sbjct: 552 VREL 555
>gi|340716839|ref|XP_003396900.1| PREDICTED: glutamate receptor 1-like [Bombus terrestris]
Length = 924
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 294/606 (48%), Gaps = 74/606 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I IF +EV +AF+ A+ N + L+ V + D+ ++L+C+
Sbjct: 20 ISIGAIFEQGTDEVQSAFKFAM--FNHNQNTTTRKFELQAFVDVINTADAYKLSRLICSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESH 118
S G+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H
Sbjct: 78 FSRGVFSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH 136
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-- 176
+ I + W +Y++HD L+ LQQ+ + ++PG S + +
Sbjct: 137 ---RAIIDTVRYYGWKKIIYLYDSHDGLLRLQQIYQG-------LKPGNESFQVETVKRI 186
Query: 177 ---PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---L 229
+ D+ L+E+ S +++LDC D I+ ++V L +Y+LS +
Sbjct: 187 QNMSEAIDFLRSLEELNRWSNKYVILDCPTDMAKDIVVSHVRDVALGKRTYHYLLSGLIM 246
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
W + +++ G NIT R+++ T P+++ + GW + S E++
Sbjct: 247 DDRW-ESEVIEY-----GAINITGFRIVDATRPYVKDFLAGW--HRLDPATSQGAGRESI 298
Query: 290 KIEAALMYDAVYLFAAALQSLGERKP---------LP---------TPLSCENPSSW--- 328
+AALMYDAV++ A +KP +P L C N W
Sbjct: 299 SAQAALMYDAVFVLVEAFNKFLRKKPDRSNVRRTGIPGGSQITNGTRALDCNNSRGWVTP 358
Query: 329 -QHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGL 386
++G I ++ + I+G+TG I + GRR++++L VE + V + W G
Sbjct: 359 FEYGDKISKNLRKVEIEGLTGEIRFNDD-GRRHNYTLHVVEMTVNSAMVKVAEWTDEAGF 417
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN-PETGELY------- 438
+ E +N+T VT+ EPY+MK +TGE+
Sbjct: 418 QAIAAKYIRLRPHTEIEKNKTYIVTT---------IVEEPYIMKKKSDTGEILTGNDSYE 468
Query: 439 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTI 497
GY DL +IA +L +Y+ + ++ YG NP G W+G++GEL + AD+AI +TI
Sbjct: 469 GYCKDLADLIAKKLGISYELRIVKDGKYGMENPDVPGGWDGMVGELIRKEADIAIAPMTI 528
Query: 498 TSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLF 557
TSER +DF+ PFM+LGISI+ +KP K++P +FSFL PLS ++WV + +Y+GVS++LF
Sbjct: 529 TSERERVIDFSKPFMSLGISIMIKKPIKQKPGVFSFLNPLSKEIWVCVIFSYIGVSIVLF 588
Query: 558 FLARIS 563
++R S
Sbjct: 589 TVSRFS 594
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 741 IYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPI 793
I S+ F + F+ + ++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI
Sbjct: 643 INSLWFALAAFMQQGCDISPRSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVAPI 702
Query: 794 KNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+ EDLA ++YG + GST +FF+
Sbjct: 703 NSPEDLASQTEVQYGTLSHGSTWDFFR 729
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S ++LY +M M +SR VFVK+ EG+ RV KGKYA +ES EY E+ CD
Sbjct: 729 RKSQINLYSKMWEFM-NSRKHVFVKTYDEGIRRVRTSKGKYALLIESPKNEYINEREPCD 787
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 788 TMKVGRNLDAKGFGVATP 805
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 671 EPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+MK +TGE+ GY DL +IA +L +Y+ + ++ YG NP G
Sbjct: 447 EPYIMKKKSDTGEILTGNDSYEGYCKDLADLIAKKLGISYELRIVKDGKYGMENPDVPGG 506
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 507 WDGMVGEL 514
>gi|195434832|ref|XP_002065406.1| GK14684 [Drosophila willistoni]
gi|194161491|gb|EDW76392.1| GK14684 [Drosophila willistoni]
Length = 915
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 286/580 (49%), Gaps = 45/580 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+K+ IF E E+A AF+I + +N AL P + EPI ++ DS+ L C+
Sbjct: 26 VKVGAIFFDTEMELAEAFDIVIGEVN----ALNPALRFEPIKHYITVDDSILLQDLSCDL 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT-NGVHGVNVYPESHL 119
G+ AIFGP S + +I++ +C M IPH++ W P + N VNV P +
Sbjct: 82 IGNGVVAIFGPSSKTSSDIVDVLCNMTGIPHMQFDWHPQQSSRERLNRQLTVNVAPMEVI 141
Query: 120 ISKGISVIIN--DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S +S I++ D DW +FTI YE + +L LQ V K++ + + +++
Sbjct: 142 LSNALSDILSSKDFDWKSFTIAYEKNSHLSRLQHVFAW-----KQLH--KTGIKLQEFE- 193
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I N+ E +LLDC D V ++ + + ++ G + + L+ L ++
Sbjct: 194 RGDDYRVLWKRINNAREKFVLLDCPSDIIVDVINASIKFNMTGSFNHLFLTNLDTHVSGI 253
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF A I +R P P + ++ + E + R SL + L+
Sbjct: 254 DRFYSRDFTVAVAAIR-IRAYIP--PPLHDEIDVFDNEVDTRFDSLRTQ---------LV 301
Query: 297 YDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM-----TGRIN 351
YDAV LF AL L +R TP WQ G + MK I+ + T R++
Sbjct: 302 YDAVVLFYNALLQLSQRTGFYTPEFGCGRGFWQPGPHLIQQMKDISPKQVKPPFKTQRLH 361
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEKI 403
++ + G+R+ F+LE + D +V WN F L N ++ V+Q +E KE
Sbjct: 362 IN-EDGQRDDFNLEVYNPLID--RVTHVWNKEFQLVDFETIKENSTQAVKQRRQEIKEDF 418
Query: 404 ENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLER 462
+ + T T K ++ EP + GY+VDL+ +A+E F + F
Sbjct: 419 SQKQVRYTVATRVGKPYFSWKVEPEGVHYEGNERFEGYAVDLMYKLADECKFDFNFEPVP 478
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+N YG+ +P T +W+G+I +L + A + ICDLTIT RR VDFT+PFM LGISIL K
Sbjct: 479 DNKYGSYDPVTDEWDGIIRQLIDNNAQIGICDLTITQARRTVVDFTVPFMQLGISILSYK 538
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
Q D+++FL P +VW+Y+ A + ++ L R+
Sbjct: 539 EPPPQADIYAFLNPYGKEVWLYVMIAMMITAVALILAGRM 578
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV +G YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 703 MLSFKPDAFTKNNEEGVDRVKLSRGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 762
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMK 676
A+P + F + S G KL +GE Y ++
Sbjct: 763 AVPLNADFRSNLSVGILKLSE--KGELYKLR 791
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 669 QGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 728
Q + Y NP YG V L MIA + + R + Y P + + + E
Sbjct: 543 QADIYAFLNP-----YGKEVWLYVMIAMMITAVALILAGRMDQYEWEPPVENENHEQVRE 597
Query: 729 LQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTR 788
+ + + SIL + + RL+ WW F L++ +Y A LAAF+T+++
Sbjct: 598 NIWHLHNTMWLVLGSILNQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSK 657
Query: 789 MNPPIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
M I+++ DL ++++G + G+T +F
Sbjct: 658 MTGNIESLHDLIDQNKVQFGTIRGGATSVYF 688
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDL+ +A+E F + F +N YG+ +P T +W+G+I +L
Sbjct: 455 GYAVDLMYKLADECKFDFNFEPVPDNKYGSYDPVTDEWDGIIRQL 499
>gi|350402901|ref|XP_003486640.1| PREDICTED: glutamate receptor 1-like [Bombus impatiens]
Length = 924
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 294/606 (48%), Gaps = 74/606 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I IF +EV +AF+ A+ N + L+ V + D+ ++L+C+
Sbjct: 20 ISIGAIFEQGTDEVQSAFKFAM--FNHNQNTTTRKFELQAFVDVINTADAYKLSRLICSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESH 118
S G+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H
Sbjct: 78 FSRGVFSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH 136
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-- 176
+ I + W +Y++HD L+ LQQ+ + ++PG S + +
Sbjct: 137 ---RAIIDTVRYYGWKKIIYLYDSHDGLLRLQQIYQG-------LKPGNESFQVETVKRI 186
Query: 177 ---PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---L 229
+ D+ L+E+ S +++LDC D I+ ++V L +Y+LS +
Sbjct: 187 QNMSEAIDFLRSLEELNRWSNKYVILDCPTDMAKDIVVSHVRDVALGKRTYHYLLSGLIM 246
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
W + +++ G NIT R+++ T P+++ + GW + S E++
Sbjct: 247 DDRW-ESEVIEY-----GAINITGFRIVDATRPYVKDFLAGW--HRLDPATSQGAGRESI 298
Query: 290 KIEAALMYDAVYLFAAALQSLGERKP---------LP---------TPLSCENPSSW--- 328
+AALMYDAV++ A +KP +P L C N W
Sbjct: 299 SAQAALMYDAVFVLVEAFNKFLRKKPDRSNVRRTGIPGGSQITNGTRALDCNNSRGWVTP 358
Query: 329 -QHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGL 386
++G I ++ + I+G+TG I + GRR++++L VE + V + W G
Sbjct: 359 FEYGDKISKNLRKVEIEGLTGEIRFNDD-GRRHNYTLHVVEMTVNSAMVKVAEWTDEAGF 417
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN-PETGELY------- 438
+ E +N+T VT+ EPY+MK +TGE+
Sbjct: 418 QAIAAKYIRLRPHTEIEKNKTYIVTT---------IVEEPYIMKKKSDTGEILTGNDSYE 468
Query: 439 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTI 497
GY DL +IA +L +Y+ + ++ YG NP G W+G++GEL + AD+AI +TI
Sbjct: 469 GYCKDLADLIAKKLGISYELRIVKDGKYGMENPDVPGGWDGMVGELIRKEADIAIAPMTI 528
Query: 498 TSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLF 557
TSER +DF+ PFM+LGISI+ +KP K++P +FSFL PLS ++WV + +Y+GVS++LF
Sbjct: 529 TSERERVIDFSKPFMSLGISIMIKKPIKQKPGVFSFLNPLSKEIWVCVIFSYIGVSIVLF 588
Query: 558 FLARIS 563
++R S
Sbjct: 589 TVSRFS 594
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 741 IYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPI 793
I S+ F + F+ + ++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI
Sbjct: 643 INSLWFALAAFMQQGCDISPRSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVAPI 702
Query: 794 KNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+ EDLA ++YG + GST +FF+
Sbjct: 703 NSPEDLASQTEVQYGTLSHGSTWDFFR 729
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S ++LY +M M +SR VFVK+ EG+ RV KGKYA +ES EY E+ CD
Sbjct: 729 RKSQINLYSKMWEFM-NSRKHVFVKTYDEGIRRVRTSKGKYALLIESPKNEYINEREPCD 787
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 788 TMKVGRNLDAKGFGVATP 805
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 671 EPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+MK +TGE+ GY DL +IA +L +Y+ + ++ YG NP G
Sbjct: 447 EPYIMKKKSDTGEILTGNDSYEGYCKDLADLIAKKLGISYELRIVKDGKYGMENPDVPGG 506
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 507 WDGMVGEL 514
>gi|195050583|ref|XP_001992924.1| GH13546 [Drosophila grimshawi]
gi|193899983|gb|EDV98849.1| GH13546 [Drosophila grimshawi]
Length = 856
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 285/560 (50%), Gaps = 58/560 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVE--NYDSLHTAKLMCNATSEGIAAIFGPQSI 74
AF+ AV R+N+D K+L PD +V H++ + DS + +C+ G AIF P
Sbjct: 5 AFQYAVHRLNQD-KSLLPD---ADLVHHIKYMDSDSFQAVQKVCSLIEGGAQAIFSPTDS 60
Query: 75 ENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWD 134
I S+C DIP + ++ +NV+P I++ +I ++W
Sbjct: 61 VLATHINSICDDLDIPDIGIGRSTQEF--------SINVHPSQQYINRAFIDVIQYLNWT 112
Query: 135 TFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSE 194
F I+YE ++ L Q R + V IRQ+ P + Y +L E KN
Sbjct: 113 RFGILYEKDHGILTLNQFS----------RSIQAEVHIRQVAPLS--YLSVLNEFKNKEI 160
Query: 195 SHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTV 254
+IL+D + +LK + M +Y+ + L TS+ + T D +DF+ + NIT+
Sbjct: 161 HNILIDTNSAGISVLLKNILQ-QQMNEYKYHYL-FTSF--DLETFDLEDFKYNFVNITSF 216
Query: 255 RMINPTNPHIRSIM------NGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
R+++ + ++ I+ + I N+ SL ++ +++ EAALM+D+VY+FA LQ
Sbjct: 217 RLVDLGDVAVKEILKDIESYDRLILNRNQSIYSLK-KSVSIETEAALMFDSVYVFAIGLQ 275
Query: 309 SLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
S+ L T L+C + W GL + N + ++ G+TG I + G+R F L+ ++
Sbjct: 276 SIYPLIHL-TNLTCNDEIPWNGGLSLINYINAVEWKGLTGPIQF--KEGQRVQFKLDLIK 332
Query: 369 YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM 428
+G W LN + E ++ ++ VT L PY+
Sbjct: 333 LKQHSIVKVGEWTPQDHLNIT--------EPSLFFDSGSMNVTLVVITILET-----PYV 379
Query: 429 M----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
M KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++ +L
Sbjct: 380 MMRYGKNYTGNERFYGFCVDILETISHEVGFDYILDLVPDRKYGAKDPETGQWNGMVAQL 439
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
+ +ADLA+ +TIT R + +DFT PFM LGISIL++ P + LFSF+ PL+ ++W+
Sbjct: 440 MKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTTEPTRLFSFMNPLAIEIWI 499
Query: 544 YMATAYLGVSLLLFFLARIS 563
Y+ AYL VS+ ++ +A++S
Sbjct: 500 YVLAAYLLVSITIYIVAKLS 519
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M M++ RP F + ++G+ RV +G YAF MEST
Sbjct: 619 LDSGSTMTF-FRDSMIETYKKMWRIMDNKRPQSFTSTYEDGIRRV--NQGNYAFLMESTM 675
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLD+KGYGIA P S + K S +L+
Sbjct: 676 LDYTVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQ 720
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
AVSTR+++ +W FF+LI+++SYTANLAAFLT RM PI+N EDLA I YG ++ GS
Sbjct: 564 AVSTRIISSIWGFFSLIIVASYTANLAAFLTVERMINPIENAEDLASQTEISYGTLDSGS 623
Query: 815 TRNFFK 820
T FF+
Sbjct: 624 TMTFFR 629
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E ++++++ K +++VG I P S F S + +
Sbjct: 318 FKEGQRVQFKLDLIKLKQHSIVKVGEWTPQDHLNITEP-SLFFDSGSMNVTLVVITILET 376
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++
Sbjct: 377 PYVMMRYGKNYTGNERFYGFCVDILETISHEVGFDYILDLVPDRKYGAKDPETGQWNGMV 436
Query: 727 GELQE 731
+L +
Sbjct: 437 AQLMK 441
>gi|47212512|emb|CAF93734.1| unnamed protein product [Tetraodon nigroviridis]
Length = 969
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 271/536 (50%), Gaps = 52/536 (9%)
Query: 42 VQHVENYDSLHTAKLMCNATSEGIAAIFGP-QSIENRNIIESMCQMFDIPHVEAFWDPNK 100
+Q YD+ T MC +G+ ++ GP S + + + +C +IPH++ +
Sbjct: 45 LQKDSQYDTTDT---MCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHIKIGPEETP 101
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
+P V +YP + +S I I+ + + +++ + L+ L++++
Sbjct: 102 R-LPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAKAECLLRLEELV------- 153
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMG 220
+ R ++++R L D D PLLKEI++ + I++D + + ILK+A E+ +
Sbjct: 154 RRFLISRETLSVRMLD-DNLDPTPLLKEIRDDKVATIIIDANASVSYLILKKASELGMTS 212
Query: 221 DYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEEN 276
+ YIL+ + + + +D +NI M N T+P IRS+ W
Sbjct: 213 AFYKYILTTMDFPL----LRLEDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSW----- 263
Query: 277 ERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIG 335
G L + +ALM+DAV++ A++ L + + PLSC +P WQHG +
Sbjct: 264 REGCDLTYPGPA--LSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLM 321
Query: 336 NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVE 393
N ++ + DG+TGR+ +S+ G+R +++L +E K +G W N +N +
Sbjct: 322 NYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILEKHRGGHKEIGIWYSNNTLAMNST---- 376
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDLIKM 447
+D E + N+TL VT+ PY+M+ + G+ VD+++
Sbjct: 377 SLDINVSETLANKTLIVTT---------ILENPYVMRKDNYQDFQGNDQYEGFCVDMLRE 427
Query: 448 IANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDF 507
+A+ L F++K L + YG P G W G++GEL ++ADLA+ TITSER +DF
Sbjct: 428 VADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITSEREKVIDF 486
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ PFMTLGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 487 SKPFMTLGISILYRVQLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLS 542
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M+S +P VFVKS +EG+ RVV K YAF MEST EY NC+L
Sbjct: 654 NSRYQTYQRMWNYMKSKQPGVFVKSTEEGIARVVNSK--YAFLMESTMNEYHRGLNCNLT 711
Query: 634 QVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 712 QIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 744
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + G
Sbjct: 587 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNIEYGTIHGG 646
Query: 814 STRNFF 819
ST FF
Sbjct: 647 STMTFF 652
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+ VD+++ +A+ L F++K L + YG P G W G++GEL
Sbjct: 419 GFCVDMLREVADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGEL 462
>gi|189241889|ref|XP_968786.2| PREDICTED: similar to AGAP006027-PA [Tribolium castaneum]
gi|270016489|gb|EFA12935.1| hypothetical protein TcasGA2_TC010481 [Tribolium castaneum]
Length = 929
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 294/599 (49%), Gaps = 71/599 (11%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF +EV TAF+ A+ N++ A + L+ V + D+ ++L+CN G
Sbjct: 30 AIFEQGTDEVQTAFKFAMLNHNQNVTARRFE--LQAYVDVINTADAFKLSRLICNQFQRG 87
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G + +++ PE H +
Sbjct: 88 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLAPSSGFLDYAISMRPEYH---Q 143
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV---TIRQLPPDT 179
I + W +Y+++D L+ LQQ+ + + PG S T+R++ T
Sbjct: 144 AIIDTVRYYGWPKIIYLYDSNDGLLRLQQIYQG-------LVPGSESFQVSTVRRISNVT 196
Query: 180 DDYRPL--LKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---LTSYW 233
+ + L L+E +++LDCS D I+ +++ L +Y+LS + W
Sbjct: 197 EALQFLRGLEEQSRWEHKYVVLDCSADMAKEIVVSHVRDIALGKRTYHYLLSGLVMDDRW 256
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
+ +++ G NIT R+++ + H++ ++ W ++ + S N E++ +A
Sbjct: 257 -ESEVIEY-----GAINITGFRIVDSSRKHVKDFLDNW--KKLDSTGSQNTGRESISAQA 308
Query: 294 ALMYDAVYLFAAALQSLGERKP---------------LPTPLSCENPSS----WQHGLGI 334
ALMYDAV++ A L +K L C W+HG I
Sbjct: 309 ALMYDAVFVLVEAFNKLLRKKQDIFRNNMRRGQIFNNGSKGLDCNASGGWVIPWEHGDKI 368
Query: 335 GNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSRTVE 393
++ + I+G+TG I S+ GRR +++L VE + V + W+ G
Sbjct: 369 SRYLRKVEIEGLTGEIRF-SEDGRRQNYTLHVVEMTINSAMVKVAEWSDETGFTPVAAKY 427
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY-MMKNPETGE-------LYGYSVDLI 445
K + NRT VT+ EPY M+++PE GE GY DL
Sbjct: 428 IRLKSNAQIERNRTYIVTT---------IVEEPYIMLRSPEPGETLSGNDRFEGYCKDLA 478
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAA 504
+IA L TY+ + ++ YG+ N + G W+G++GEL AD+AI +TITSER
Sbjct: 479 DLIAKHLGITYELRVVKDGNYGSENHEVKGNWDGMVGELVRNEADIAIAPMTITSERERV 538
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+DF+ PFM+LGISI+ +KP K++P +FSFL PLS ++WV + +Y+GVS++LF ++R S
Sbjct: 539 IDFSKPFMSLGISIMIKKPMKQKPGVFSFLNPLSKEIWVCVIFSYIGVSIVLFTVSRFS 597
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA ++YG + G+
Sbjct: 651 SISGRIVGAVWWFFTLILISSYTANLAAFLTVERMVAPINSPEDLASQTEVEYGTLYHGA 710
Query: 815 TRNFFK 820
T +FFK
Sbjct: 711 TWDFFK 716
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
K S ++LY +M M +SR VFVKS EG+ RV KGKYA +ES +Y E+ CD
Sbjct: 716 KRSQITLYSKMWEYM-NSRKHVFVKSYDEGIRRVRTSKGKYALLIESPKNDYINEREPCD 774
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 775 TMKVGRNLDAKGFGVATP 792
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 671 EPY-MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY M+++PE GE GY DL +IA L TY+ + ++ YG+ N + G
Sbjct: 450 EPYIMLRSPEPGETLSGNDRFEGYCKDLADLIAKHLGITYELRVVKDGNYGSENHEVKGN 509
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 510 WDGMVGEL 517
>gi|350538701|ref|NP_001232890.1| glutamate receptor, ionotropic kainate 5 [Danio rerio]
gi|160773959|gb|AAI55084.1| Grik5 protein [Danio rerio]
Length = 716
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 273/528 (51%), Gaps = 54/528 (10%)
Query: 53 TAKLMCNATSEGIAAIFGP-QSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGV 111
T MC +G+ ++ GP S + +I+ +C +IPHV+ + +P V
Sbjct: 69 TTDTMCQILPKGVVSVIGPASSPASGSIVSHICGEKEIPHVKIGPEETPR-LPYLRFASV 127
Query: 112 NVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVT 171
+YP + +S I I+ + + +++ + L+ L++++ + R +++
Sbjct: 128 TLYPSNEDLSLAIGSILRSFSYPSASLVCAKAECLLRLEELI-------RRFLISRETLS 180
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IR L D D PLLKEI++ + I++D + + ILK+A E+ + + YIL+
Sbjct: 181 IRMLD-DNLDPTPLLKEIRDDKIATIIIDANASISYLILKKASELGMTSAFYKYILTTMD 239
Query: 232 Y---WINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNV 284
+ W++ D D Q +NI M N T+P IRS+ W G +N
Sbjct: 240 FPLLWLD----DIVDEQ---SNIVGFSMFNTTHPFYLEFIRSLNLSW-----REGCDINP 287
Query: 285 RAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AL++DAV++ +A+Q L + + PLSC +P WQHG + N ++ +
Sbjct: 288 YPGPA-LSSALLFDAVHVVVSAVQELNRSQEIGVKPLSCTSPQIWQHGTSLMNYLRMVEY 346
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKE 401
DG+TGR+ +S+ G+R +++L +E K +G W N +N + +D E
Sbjct: 347 DGLTGRVEFNSK-GQRTNYTLHILEKHRGGHKEIGIWYSNNTLLMNST----SLDINVSE 401
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFT 455
+ N++L +T+ PY+M+ E E Y G+ VD+++ +++ L FT
Sbjct: 402 TLANKSLIITT---------ILENPYVMRKINYQEFEGNEQYEGFCVDMLRELSDILKFT 452
Query: 456 YKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
Y+ L + YG P G W G++GEL ++ADLA+ TITSER +DF+ PFMTLG
Sbjct: 453 YRIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLG 511
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 512 ISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLSARLS 559
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + GS
Sbjct: 605 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNIQYGTIHGGS 664
Query: 815 TRNFF 819
T FF
Sbjct: 665 TMTFF 669
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 672 PYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ E E Y G+ VD+++ +++ L FTY+ L + YG P G W G+
Sbjct: 417 PYVMRKINYQEFEGNEQYEGFCVDMLRELSDILKFTYRIKLVDDGLYGAPEPN-GSWTGM 475
Query: 726 IGEL 729
+GEL
Sbjct: 476 VGEL 479
>gi|432910005|ref|XP_004078270.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like [Oryzias
latipes]
Length = 1031
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 270/536 (50%), Gaps = 52/536 (9%)
Query: 42 VQHVENYDSLHTAKLMCNATSEGIAAIFGP-QSIENRNIIESMCQMFDIPHVEAFWDPNK 100
+Q YD+ T MC +G+ ++ GP S + + + +C +IPHV+ +
Sbjct: 61 LQKDSQYDTTDT---MCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHVKIGPEETP 117
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
+P V +YP + +S I I+ + + +++ + L+ L++++
Sbjct: 118 R-LPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAKAECLLRLEELV------- 169
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMG 220
+ R ++++R L D D PLLKEI++ + I++D + + ILK+A E+ +
Sbjct: 170 RRFLISRETLSVRMLD-DNLDPTPLLKEIRDDKVATIIIDANASVSYLILKKASELGMTS 228
Query: 221 DYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEEN 276
+ YIL+ + + + D +NI M N T+P IRS+ W
Sbjct: 229 AFYKYILTTMDFPL----LRLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSW----- 279
Query: 277 ERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIG 335
G L + +ALM+DAV++ A++ L + + PLSC +P WQHG +
Sbjct: 280 REGCDLTYPGPA--LSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLM 337
Query: 336 NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVE 393
N ++ + DG+TGR+ +S+ G+R +++L +E K +G W N +N +
Sbjct: 338 NYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILEKHRGGHKEIGIWYSNNTLAMNST---- 392
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDLIKM 447
+D E + N+TL VT+ PY+M+ + G+ VD+++
Sbjct: 393 SLDINVSETLANKTLIVTT---------ILENPYVMRKDNYQDFQGNDQYEGFCVDMLRE 443
Query: 448 IANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDF 507
+A+ L F++K L + YG P G W G++GEL ++ADLA+ TITSER +DF
Sbjct: 444 LADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITSEREKVIDF 502
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ PFMTLGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 503 SKPFMTLGISILYRVQLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLS 558
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M S +PSVFVKS +EG+ RV+ K YAF MEST EY NC+L
Sbjct: 670 NSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSK--YAFLMESTMNEYHRGLNCNLT 727
Query: 634 QVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 728 QIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 760
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + G
Sbjct: 603 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEAPIESPDDLADQTNIEYGTIHGG 662
Query: 814 STRNFF 819
ST FF
Sbjct: 663 STMTFF 668
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+ VD+++ +A+ L F++K L + YG P G W G++GEL
Sbjct: 435 GFCVDMLRELADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGEL 478
>gi|348526420|ref|XP_003450717.1| PREDICTED: glutamate receptor, ionotropic kainate 5 [Oreochromis
niloticus]
Length = 1036
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 270/536 (50%), Gaps = 52/536 (9%)
Query: 42 VQHVENYDSLHTAKLMCNATSEGIAAIFGP-QSIENRNIIESMCQMFDIPHVEAFWDPNK 100
+Q YD+ T MC +G+ ++ GP S + + + +C +IPHV+ +
Sbjct: 61 LQKDSQYDTTDT---MCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHVKIGPEETP 117
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
+P V +YP + +S I I+ + + +++ + L+ L++++
Sbjct: 118 R-LPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAKAECLLRLEELV------- 169
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMG 220
+ R ++++R L D D PLLKEI++ + I++D + + ILK+A E+ +
Sbjct: 170 RRFLISRETLSVRMLD-DNLDPTPLLKEIRDDKVATIIIDANASVSYLILKKASELGMTS 228
Query: 221 DYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEEN 276
+ YIL+ + + + D +NI M N T+P IRS+ W
Sbjct: 229 AFYKYILTTMDFPL----LRLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSW----- 279
Query: 277 ERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIG 335
G L + +ALM+DAV++ A++ L + + PLSC +P WQHG +
Sbjct: 280 REGCDLTYPGPA--LSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLM 337
Query: 336 NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVE 393
N ++ + DG+TGR+ +S+ G+R +++L +E K +G W N +N +
Sbjct: 338 NYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILEKHRGGHKEIGIWYSNNTLAMNST---- 392
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDLIKM 447
+D E + N+TL VT+ PY+M+ + G+ VD+++
Sbjct: 393 SLDINVSETLANKTLIVTT---------ILENPYVMRKDNYQDFQGNDQYEGFCVDMLRE 443
Query: 448 IANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDF 507
+A+ L F++K L + YG P G W G++GEL ++ADLA+ TITSER +DF
Sbjct: 444 LADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAVAGFTITSEREKVIDF 502
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ PFMTLGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 503 SKPFMTLGISILYRVQLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLS 558
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M S +PSVFVKS +EG+ RV+ K YAF MEST EY NC+L
Sbjct: 670 NSRYQTYQRMWNYMNSKQPSVFVKSTEEGIARVLNSK--YAFLMESTMNEYHRGLNCNLT 727
Query: 634 QVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 728 QIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 760
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + G
Sbjct: 603 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEAPIESPDDLADQTNIEYGTIHGG 662
Query: 814 STRNFF 819
ST FF
Sbjct: 663 STMTFF 668
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+ VD+++ +A+ L F++K L + YG P G W G++GEL
Sbjct: 435 GFCVDMLRELADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGEL 478
>gi|391329241|ref|XP_003739084.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Metaseiulus occidentalis]
Length = 1208
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 176/626 (28%), Positives = 296/626 (47%), Gaps = 93/626 (14%)
Query: 3 IVGIFGPNEEE-VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
I G+F E+ + AV RIN+D L L+ + DS +K +C
Sbjct: 42 IGGVFDQGEDSGLDVHLTQAVERINQDASILRGHQ-LKALSFKTNPGDSFVASKCVCELV 100
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
+ IAA+ GP S + ++ ++S IP+++ + + P + ++P ++
Sbjct: 101 RQAIAALIGPTSWQVQSYVQSASYRMQIPYLQTSPEFRERLSPFT----LYLHPSVQQLN 156
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ +I W +F + Y+ + V L+ VL + + P P+V + P
Sbjct: 157 RAYHDLIQSRKWKSFAVFYDNDNVFVALKDVL------NASLNP--PNVLMYPYNPALS- 207
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
++ +LK+I + + +I+L + K + ++AKEV+ Y +YI++ ++ HT+D
Sbjct: 208 FKKMLKDIGSKNIYNIILHLELAKLPQLFREAKEVNQTTLYHDYIVT----GLDFHTLDL 263
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGW-----IYEEN----------ERGRSLNVRA 286
++F AN++ R+I+P ++ + W + +N + +S N+
Sbjct: 264 REFYSLKANVSAFRIIDPDRKEVQVVRRDWALATGLASQNYQSPTASGALRKDKSPNLDR 323
Query: 287 ETV------------------------------KIEAALMYDAVYLFAAALQSLGERK-- 314
++ + AL+YDAV L AA ++SL E++
Sbjct: 324 ISIPQSLAENFQSAPCRRALRGPKKFEREKNFFQTTEALLYDAVALVAAGIESLKEKEWK 383
Query: 315 ----------PLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSL 364
PL + L C W+ G + +K + G++G + L+ ++G R+ F+L
Sbjct: 384 DNNNYNKNPPPLFSQLDCNRSVHWEQGKALLEAIKGARVRGLSGDLRLNRRSGTRDEFAL 443
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVE-QMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
+ VE + TW T GL S + D E + +E TL V S VL
Sbjct: 444 DIVELKHSGLRKTATWTTREGLKFSAANRTEQDAELSKTLEGMTLRVVS-------VL-- 494
Query: 424 GEPYMMKNPET------GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
EPY M P + YGY++DLIK +A F Y F + ++ YG+ P GKWN
Sbjct: 495 NEPYTMLYPASENRTGNNRYYGYAIDLIKELAAVCKFNYTFYISPDSKYGSRQPD-GKWN 553
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++GEL +++AD+A+ DLTIT +R VDFT+PFM GISIL++KP K +P +FSFL P
Sbjct: 554 GMVGELIQRKADIAVVDLTITYDREQVVDFTIPFMNTGISILFKKPEKSEPAIFSFLYPF 613
Query: 538 SFDVWVYMATAYLGVSLLLFFLARIS 563
S VW Y T Y VS+L++ L R +
Sbjct: 614 SIVVWFYTLTVYTFVSILVYVLGRFT 639
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
F + SI+ V A+STR++A +W+FFTLI+ISSYTANLAAFLT RM PI+N D
Sbjct: 668 FTMGSIMQQGSDLVPRAISTRVLASIWYFFTLILISSYTANLAAFLTAARMGAPIENAND 727
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LAK +I YGC+ GST FFK
Sbjct: 728 LAKQTKIAYGCLGGGSTYGFFK 749
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K N + +RM + ME+ RP+VF SNKEG+ERV++ G YA+ ME+ IEY VE+NC+L
Sbjct: 749 KKHNDPVMKRMWTYMEAERPTVFTTSNKEGIERVLR--GDYAYLMEALSIEYLVERNCNL 806
Query: 633 MQVGGLLDSKGYGIAMP 649
Q+G LLDSKGYGIA P
Sbjct: 807 TQIGTLLDSKGYGIATP 823
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 671 EPYMMKNPET------GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M P + YGY++DLIK +A F Y F + ++ YG+ P GKWNG
Sbjct: 496 EPYTMLYPASENRTGNNRYYGYAIDLIKELAAVCKFNYTFYISPDSKYGSRQPD-GKWNG 554
Query: 725 LIGELQEQ------VDTFILFFIYSILFFIYTFVNEAVS 757
++GEL ++ VD I + ++ F F+N +S
Sbjct: 555 MVGELIQRKADIAVVDLTITYDREQVVDFTIPFMNTGIS 593
>gi|410905829|ref|XP_003966394.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like [Takifugu
rubripes]
Length = 1032
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 270/536 (50%), Gaps = 52/536 (9%)
Query: 42 VQHVENYDSLHTAKLMCNATSEGIAAIFGP-QSIENRNIIESMCQMFDIPHVEAFWDPNK 100
+Q YD+ T MC +G+ ++ GP S + + + +C +IPH++ +
Sbjct: 61 LQKDSQYDTTDT---MCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHIKIGPEETP 117
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
+P V +YP + +S I I+ + + +++ + L+ L++++
Sbjct: 118 R-LPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAKAECLLRLEELV------- 169
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMG 220
+ R ++++R L D D PLLKEI++ + I++D + + ILK+A E+ +
Sbjct: 170 RRFLISRETLSVRMLD-DNLDPTPLLKEIRDDKVATIIIDANASVSYLILKKASELGMTS 228
Query: 221 DYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEEN 276
+ YIL+ + + + +D +NI M N T+P IRS+ W
Sbjct: 229 AFYKYILTTMDFPL----LRLEDIVDDQSNIVGFSMFNTTHPFYLEFIRSLNLSW----- 279
Query: 277 ERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIG 335
G L + +ALM+DAV++ A++ L + + PLSC +P WQHG +
Sbjct: 280 REGCDLTYPGPA--LSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLM 337
Query: 336 NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVE 393
N ++ + DG+TGR+ +S+ G+R +++L +E K +G W N +N +
Sbjct: 338 NYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILEKHRGGHKEIGIWYSNNTLAMNST---- 392
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDLIKM 447
+D E + N+TL VT+ PY+M+ + G+ VD+++
Sbjct: 393 SLDINVSETLANKTLIVTT---------ILENPYVMRKDNYQDFQGNDQYEGFCVDMLRE 443
Query: 448 IANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDF 507
+A+ L F+++ L + YG P G W G++GEL ++ADLA TITSER +DF
Sbjct: 444 VADILKFSFRIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAAAAFTITSEREKVIDF 502
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ PFMTLGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 503 SKPFMTLGISILYRVQLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLS 558
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M+S +P VFVKS +EG+ RVV K YAF MEST EY NC+L
Sbjct: 670 NSRYQTYQRMWNYMKSKQPGVFVKSTEEGIARVVNSK--YAFLMESTMNEYHRGLNCNLT 727
Query: 634 QVGGLLDSKGYGIAMP 649
Q+GGLLD+KGYGI MP
Sbjct: 728 QIGGLLDTKGYGIGMP 743
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + G
Sbjct: 603 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNIEYGTIHGG 662
Query: 814 STRNFF 819
ST FF
Sbjct: 663 STMTFF 668
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+ VD+++ +A+ L F+++ L + YG P G W G++GEL
Sbjct: 435 GFCVDMLREVADILKFSFRIKLVDDGLYGAPEPN-GSWTGMVGEL 478
>gi|194913519|ref|XP_001982715.1| GG16440 [Drosophila erecta]
gi|190647931|gb|EDV45234.1| GG16440 [Drosophila erecta]
Length = 669
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 283/560 (50%), Gaps = 57/560 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF A+ R+N D K+L P+ ++ +++V +DS T + +C G+ AIF P
Sbjct: 41 AFRYAIHRLNMD-KSLLPETTVDYYIEYVNRFDSFETVQKVCKLIRVGVQAIFSPTDSVL 99
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPESHLISKGISVIINDMDWD 134
I S+C DIP++ H +NVYP ++ + +I ++W
Sbjct: 100 ATHINSVCDALDIPNI------------GRSAHDFSINVYPSQKYVNYAFNDVIQYLNWT 147
Query: 135 TFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSE 194
F I++E + ++ L Q+ + H + V +RQ+ + Y L E K
Sbjct: 148 RFGILHEKENGILNLHQLSRSFHGE----------VHMRQVSRGS--YLSALNEFKGKEI 195
Query: 195 SHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTV 254
+I++D + + +LK + M +Y+ + L TS+ + A+ D +DF+ + NIT+
Sbjct: 196 HNIIIDTNSNGISILLKNILQ-QQMNEYKYHYL-FTSFDLEAY--DLEDFKYNFVNITSF 251
Query: 255 RMINPTNPHIRSIMNGWIYEENERGR----SLNVRAETV-KIEAALMYDAVYLFAAALQS 309
R+++ + ++ I+ + + + +L+V+ T+ + E ALM+D+VY+FA LQ+
Sbjct: 252 RLVDTGDVGVKQILKDIGFYSHHMLKKPFFNLHVQKSTILESEPALMFDSVYVFAIGLQT 311
Query: 310 LGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + L + +SC+ W GL + N + ++ G+TG I + G+R F L+ ++
Sbjct: 312 LEQSHSLTFSNISCDEEIPWNGGLSLINYLNAVEWKGLTGPIQF--KDGQRVQFKLDLIK 369
Query: 369 YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM 428
+G W LN + D N TL V + PY+
Sbjct: 370 LKQHSIVKVGEWTPHGHLNITEPSMFFDAGSM----NVTLVV---------ITILETPYV 416
Query: 429 M----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++ +L
Sbjct: 417 MMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGQWNGMVAQL 476
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
+ +ADLA+ +TIT R + +DFT PFM LGISIL++ PA + LFSF+ PL+ ++W+
Sbjct: 477 MKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPASEPTRLFSFMNPLAIEIWL 536
Query: 544 YMATAYLGVSLLLFFLARIS 563
Y+ AY VS+ ++ + ++S
Sbjct: 537 YVLIAYFLVSICIYVVGKLS 556
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR+++ +W FF+LI+++SYTANLAAFLT RM PI+N +DLA I YG ++ G
Sbjct: 600 RAMSTRIISSIWGFFSLIIVASYTANLAAFLTTERMINPIENADDLASQTEISYGTLDSG 659
Query: 814 STRNFFKV 821
ST FF+V
Sbjct: 660 STMTFFRV 667
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG+WNG++
Sbjct: 414 PYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGQWNGMV 473
Query: 727 GELQE 731
+L +
Sbjct: 474 AQLMK 478
>gi|383858325|ref|XP_003704652.1| PREDICTED: glutamate receptor 1-like [Megachile rotundata]
Length = 1111
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 170/604 (28%), Positives = 292/604 (48%), Gaps = 76/604 (12%)
Query: 4 VGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
IF +EV +AF+ A+ N++ L+ V + D+ ++L+C+ S
Sbjct: 53 CAIFEQGTDEVQSAFKFAMFNHNQNTTR---KFDLQAFVDVINTADAYKLSRLICSQFSR 109
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLIS 121
G+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H
Sbjct: 110 GVFSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH--- 165
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP----- 176
+ I + W +Y++HD L+ LQQ+ + ++PG S + +
Sbjct: 166 RAIIDTVRYYGWKKIIYLYDSHDGLLRLQQIYQG-------LKPGNESFQVETVKRIQNM 218
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---LTSY 232
+ D+ L+E+ S +++LDC D I+ ++V L +Y+LS +
Sbjct: 219 SEAIDFLRSLEELNRWSNKYVVLDCPTDMAKDIVVSHVRDVALGKRTYHYLLSGLIMDDR 278
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
W + +++ G NIT R+++ P+++ + GW + S E++ +
Sbjct: 279 W-ESEVIEY-----GAINITGFRIVDAGRPYVKDFLAGW--HGLDPATSQGAGRESISAQ 330
Query: 293 AALMYDAVYLFAAALQSLGERKP---------LP---------TPLSCENPSSW-----Q 329
AALMYDAV++ A +K +P L C + W +
Sbjct: 331 AALMYDAVFVLVEAFNKFLRKKADRSNVRRTGIPGSNQITNGTRALDCNSSRGWGVTPFE 390
Query: 330 HGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNH 388
HG I L++ + I+G+TG I + GRR++++L VE + V + W G
Sbjct: 391 HGDKISRLLRKVEIEGLTGEIRFNDD-GRRHNYTLHVVEMTVNSAMVKVAEWTDEAGFQA 449
Query: 389 SRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNPETGELY-------GY 440
+ E +N+T VT+ EPY+M K +TGE+ GY
Sbjct: 450 IAAKYIRLRPHTEIEKNKTYIVTT---------IVEEPYIMRKKSDTGEILTGNDSYEGY 500
Query: 441 SVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITS 499
DL +IA +L TY+ + ++ YG NP G W+G++GEL + AD+AI +TITS
Sbjct: 501 CKDLADLIAKKLGITYELRIVKDGKYGMENPDVPGGWDGMVGELIRKEADIAIAPMTITS 560
Query: 500 ERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFL 559
ER +DF+ PFM+LGISI+ +KP K++P +FSFL PLS ++WV + +Y+GVS++LF +
Sbjct: 561 ERERVIDFSKPFMSLGISIMIKKPIKQKPGVFSFLNPLSKEIWVCVIFSYIGVSIVLFTV 620
Query: 560 ARIS 563
+R S
Sbjct: 621 SRFS 624
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 741 IYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPI 793
I S+ F + F+ + ++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI
Sbjct: 673 INSLWFALAAFMQQGCDISPRSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVAPI 732
Query: 794 KNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+ EDLA ++YG + GST +FF+
Sbjct: 733 NSPEDLASQTEVQYGTLSHGSTWDFFR 759
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S ++LY +M M +SR VFVK+ EG+ RV KGKYA +ES EY E+ CD
Sbjct: 759 RKSQINLYSKMWEFM-NSRKHVFVKTYDEGIRRVRTSKGKYALLIESPKNEYINEREPCD 817
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 818 TMKVGRNLDAKGFGVATP 835
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 671 EPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+M K +TGE+ GY DL +IA +L TY+ + ++ YG NP G
Sbjct: 477 EPYIMRKKSDTGEILTGNDSYEGYCKDLADLIAKKLGITYELRIVKDGKYGMENPDVPGG 536
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 537 WDGMVGEL 544
>gi|432882283|ref|XP_004073958.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like [Oryzias
latipes]
Length = 1148
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 165/561 (29%), Positives = 282/561 (50%), Gaps = 49/561 (8%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGP-QSIE 75
A +A IN + + +E V ++ T MC +G+ ++ GP S
Sbjct: 123 ALALARENINNNIEG-ASQARVEVDVYELQKDSQYETTDTMCQILPKGVVSVIGPASSPA 181
Query: 76 NRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDT 135
+ + I +C +IPHV+ + +P V +YP + +S I I+ + T
Sbjct: 182 SGSTISHICGEKEIPHVKIGPEETPK-LPYLRFASVTLYPSNEDMSLAIGSILRSFGYPT 240
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
++I + L+ L++++ + R ++++R L D+ D PLLKEI++ +
Sbjct: 241 ASLICAKAECLLRLEELV-------RHFLISRETLSVRMLD-DSLDPTPLLKEIRDDKVA 292
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
I++D + + IL++A E+ +M + YIL+ + + + D +NI
Sbjct: 293 TIIIDANASISYQILRKANELGMMTAFYKYILTTMDFPL----LKMDDVVNDQSNILGFS 348
Query: 256 MINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG 311
M+N T+P IRS+ W G ++ + +ALM+D V++ A++ L
Sbjct: 349 MLNRTHPFFSEFIRSLNLSW-----REGCHISPYPGPA-LSSALMFDGVHVVVGAVRELN 402
Query: 312 ERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYV 370
+ + PLSC +P WQHG + N ++ + DG+TG I +S+ G+R +++L+ +E
Sbjct: 403 RSQEIGVKPLSCTSPLIWQHGTSLMNYLRMVEYDGLTGHIEFNSK-GQRTNYTLKILEKH 461
Query: 371 SDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM 428
+K +GTW N +N + +D + + N++L VT+ PY+
Sbjct: 462 PAGYKEIGTWYSNNTLVMNST----SLDLNASQTLANKSLIVTT---------ILENPYV 508
Query: 429 MKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 482
M+ + G+ VD+++ +A L F++K L + YG P G W G++GE
Sbjct: 509 MRKSNYQDYQGNDQYEGFCVDMLRELAGILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGE 567
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
L +++ADLA+ TITSER +DF+ PFMTLGISILYR ++P FSFL+P S VW
Sbjct: 568 LIDRKADLAVAGFTITSEREKVIDFSKPFMTLGISILYRVHLGRKPGYFSFLDPFSPAVW 627
Query: 543 VYMATAYLGVSLLLFFLARIS 563
++M AYL VS +LF AR+S
Sbjct: 628 LFMLLAYLAVSCVLFLAARLS 648
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M S +PSVFVKS +EG+ RV+ K YAF MEST EY NC+L
Sbjct: 760 NSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSK--YAFLMESTMNEYYRSLNCNLT 817
Query: 634 QVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S + + + G +++
Sbjct: 818 QIGGLLDTKGYGIGMPLGSPYRHEITLGILQMQ 850
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + G
Sbjct: 693 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEAPIESADDLADQTNIQYGTIHGG 752
Query: 814 STRNFF 819
ST FF
Sbjct: 753 STMTFF 758
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
G+ VD+++ +A L F++K L + YG P G W G++GEL
Sbjct: 525 GFCVDMLRELAGILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGEL 568
>gi|321460823|gb|EFX71861.1| hypothetical protein DAPPUDRAFT_326779 [Daphnia pulex]
Length = 906
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 302/630 (47%), Gaps = 77/630 (12%)
Query: 3 IVGIFGPNEEEVATAFEIAVRRINK-DFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
I IF +E+ AF AV + N+ + A L+ V + D++ ++L+C
Sbjct: 35 IGAIFEVGTDEMQAAFRHAVAQFNRMNESANGRRYELQAFVDIISTADTVKLSRLICTQL 94
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHL 119
S GI AI G S ++ + I S + +P W P K +PT+G+ + +++ PE H
Sbjct: 95 SRGIFAILGVVSADSFSTIHSYTNTYHMPFFSP-WFPEKVPVPTSGLMDYALSLRPEYH- 152
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL---- 175
+ I +I W IY++HD L+ LQ++ + I+PG ++ I +
Sbjct: 153 --QAILDVITYYGWKNIIYIYDSHDGLLRLQELYQ-------RIKPGSNNILIEMVRRVE 203
Query: 176 -PPDTDDYRPLLKEIKNSSESHILLDCSMD-KTVTILKQAKEVHLMGDYQNYILS---LT 230
+ + L+ I ++LDCS + I++ K+VHL +Y+LS +
Sbjct: 204 NSREAIQFLQTLESIDRYGRKFVVLDCSASLASEIIIQHVKDVHLGRRNYHYLLSGLVMD 263
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVK 290
W D + + G NIT R+I+ P ++ W E + +
Sbjct: 264 DRW------DERVKEYGAINITGFRIIDTERPIVQQFFRTW--EALDPAIYPGAGKPFIP 315
Query: 291 IEAALMYDAVYLFAAALQSLGERKP-----------------LPTPLSCENPSSWQHGLG 333
+AAL+YDAV L A + ++KP L+C + W+ G
Sbjct: 316 AQAALVYDAVTLVADTFNRMLKKKPDTFRSYLQRNKGESLANASRALNCSRNAVWEQGDR 375
Query: 334 IGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYV--SDQWKVLGTWN--TAFGLNHS 389
I + + ++G+TG + + GRR +F+L VE SD K+ G W+ T F +
Sbjct: 376 IAKFARKVNLEGLTGSLRF-GEDGRRENFTLSVVEMTVNSDIVKI-GQWSEQTRFQTVPA 433
Query: 390 RTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNPETGE-------LYGYS 441
+ V + EK NRT VT+ + EPYMM + E GE GY
Sbjct: 434 KYVRLPATPEFEK--NRTYIVTT---------YMEEPYMMMRKTEGGEELTGNDQFEGYC 482
Query: 442 VDLIKMIANELNFTYKFVLERENTYGTLNPQ-TGKWNGLIGELQEQRADLAICDLTITSE 500
D++ +IA +L Y+ +++ YG NP TG W+G+IGEL + AD+A+ LTI S
Sbjct: 483 KDMMDLIAAKLGINYELRKVKDHRYGNENPNVTGGWDGIIGELVRREADMAVAALTINSG 542
Query: 501 RRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLA 560
R VDF+ PFM LGISI+ +KP KK P +FSF++PLS +VW+ M AYLGVS++LF ++
Sbjct: 543 RERVVDFSKPFMDLGISIMIKKPVKKFPGVFSFMDPLSKEVWMCMTFAYLGVSIVLFVVS 602
Query: 561 RISSGSRLRYSAKNSNVSLYQRMHSAMESS 590
R + ++S+V+ H ++++S
Sbjct: 603 RFGGAE---WKIEDSHVAFMLTNHFSVKNS 629
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA+ +++YG + G
Sbjct: 647 RSISGRMVGAVWWFFTLILISSYTANLAAFLTVERMVTPINSAEDLARQTQVEYGTISSG 706
Query: 814 STRNFFK 820
+T +FFK
Sbjct: 707 TTLDFFK 713
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
ISSG+ L + KNS ++Y RM M +SR VFV++ EG+ RV + KGKYA +ES
Sbjct: 703 ISSGTTLDF-FKNSKFAVYSRMWEFM-NSRKHVFVRTYDEGIRRVRQSKGKYALLIESPK 760
Query: 622 IEYEVEK-NCDLMQVGGLLDSKGYGIAMP 649
+Y E+ CD M+VG LD+KG+G+A P
Sbjct: 761 NDYVNERYPCDTMKVGRNLDTKGFGVATP 789
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 671 EPYMM-KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ-TGK 721
EPYMM + E GE GY D++ +IA +L Y+ +++ YG NP TG
Sbjct: 458 EPYMMMRKTEGGEELTGNDQFEGYCKDMMDLIAAKLGINYELRKVKDHRYGNENPNVTGG 517
Query: 722 WNGLIGEL 729
W+G+IGEL
Sbjct: 518 WDGIIGEL 525
>gi|357609904|gb|EHJ66741.1| hypothetical protein KGM_16051 [Danaus plexippus]
Length = 954
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 295/608 (48%), Gaps = 63/608 (10%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPP----------DIILEPIVQHVENYDSL 51
+I GIF N AF ++R N L D+ LEP++ DS
Sbjct: 32 QIAGIFENNTLTQRLAFNESIRYANLGKAELQSMSDAQGGKVKDLRLEPVIFRPGRSDSY 91
Query: 52 HTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEA---FWDPNKYFIPTNGV 108
K +C+ T+ AIFGPQ+ NII C + +IPH++A DP+ P
Sbjct: 92 SIWKDLCSNTTMQPIAIFGPQNSVTDNIIRDQCYVSNIPHIQANLQLADPDMELNPVEAT 151
Query: 109 H--------------GVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLE 154
+N YP + I ++++ W F ++YE L+ +Q++L
Sbjct: 152 DEESTEDQGLKFKKISINFYPPAEDILYAYAMLLKYYKWKNFAVLYEDDLGLLRIQKILS 211
Query: 155 NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAK 214
+D +TIR+L P+ D++ + K++K +E +++DC +D+ V L +A+
Sbjct: 212 EYTED--------YPLTIRRLDPNADNHN-IFKDLKKFNEYRVIIDCDVDRVVQYLTEAR 262
Query: 215 EVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG--YANITTVRMINPTNPHIRSIMNGWI 272
EV+++ Y++YIL + A + + FQ + +IT + + + + W
Sbjct: 263 EVNMVNHYEHYILITMDASVVAE--ELRQFQSNITWLSITEYDKLQNSQHFLTPRVGRWT 320
Query: 273 YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCE--NPSS--W 328
E + + +K A LM D ALQ + + + + P S W
Sbjct: 321 SETS----VVYPPVTDIKTSALLMDDIANHVLKALQKVEMVESIENRTMSDICGPESEPW 376
Query: 329 QHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWN-TAFGLN 387
+ G + + + G+TG I + + G+R +++L E +GTW+ TA G
Sbjct: 377 EFGALLQDEILKTKTTGVTGNIEFN-ELGQRVNYTLYVNEIYVSTLDTIGTWDSTARGEI 435
Query: 388 HSRTVEQMDKEKKEKIENRTLTVTSKT-----FAKLRVLFQGEPYMMKNPETGELYGYSV 442
E + +KK+ +++ + SK + K++ + +P ++ G+SV
Sbjct: 436 IEDRPESENYDKKKNVKH--FYIISKKAKPYFYDKIKCA-EDDPDCVEEKADENYEGFSV 492
Query: 443 DLIKMIANEL-----NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTI 497
DL+K I + L NFTY F+ + YG P+ KW+GLIG+L ++ ADLA+CDLTI
Sbjct: 493 DLVKEIFDTLRKHNFNFTYSFLPKTYTDYGKYRPEEKKWDGLIGDLLDKSADLAVCDLTI 552
Query: 498 TSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLF 557
T ER+ VDF++PFM+LGISILY K + +P +FSFL P +FDVW++ ATA+ VS++LF
Sbjct: 553 TEERKKVVDFSVPFMSLGISILYIKEKEVEPAMFSFLNPYTFDVWIHTATAFCVVSIILF 612
Query: 558 FLARISSG 565
+RIS
Sbjct: 613 VCSRISPA 620
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS L + KNS ++ +M+ M +V VK+NKEGV+RV+K GKYAFFMEST
Sbjct: 718 IDGGSTLGF-FKNSKDKMFNKMYENM-VQNSAVLVKTNKEGVKRVIKGNGKYAFFMESTS 775
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKF 657
IEYE+++NCDL +VG LDSK YGIAMP + K+
Sbjct: 776 IEYELKRNCDLKKVGEELDSKDYGIAMPANSPFRKY 811
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+ TR V MWWFF +I+ +Y A L+A +T N PI VEDL+ ++ YG ++ G
Sbjct: 662 KAIGTRWVCSMWWFFAVIVCQTYIAQLSASMTEALENEPITKVEDLSTQTKVLYGAIDGG 721
Query: 814 STRNFFK 820
ST FFK
Sbjct: 722 STLGFFK 728
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 685 GYSVDLIKMIANEL-----NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
G+SVDL+K I + L NFTY F+ + YG P+ KW+GLIG+L ++
Sbjct: 489 GFSVDLVKEIFDTLRKHNFNFTYSFLPKTYTDYGKYRPEEKKWDGLIGDLLDK 541
>gi|380018371|ref|XP_003693103.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 1-like [Apis
florea]
Length = 1105
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 293/606 (48%), Gaps = 74/606 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I IF +EV +AF+ A+ N + + V + D+ ++L+C+
Sbjct: 69 ISIGAIFEQGTDEVQSAFKFAM--FNHNQNTTTRKFEFQAFVDVINTADAYKLSRLICSQ 126
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESH 118
S G+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H
Sbjct: 127 FSRGVFSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH 185
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-- 176
+ I + W +Y++HD L+ LQQ+ + ++PG S + +
Sbjct: 186 ---RAIIDTVRYYGWKKIIYLYDSHDGLLRLQQIYQG-------LKPGNESFQVETVKRI 235
Query: 177 ---PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---L 229
+ D+ L+E+ S +++LDC D I+ ++V L +Y+LS +
Sbjct: 236 QNMSEAIDFLRSLEELNRWSNKYVVLDCPTDMXKDIVVSHVRDVALGKRTYHYLLSGLIM 295
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
W + +++ G NIT R+++ T P+++ + GW + S E++
Sbjct: 296 DDRW-ESEVIEY-----GAINITGFRIVDATRPYVKDFLAGW--HRLDPATSQGAGRESI 347
Query: 290 KIEAALMYDAVYLFAAALQSLGERKP---------LP---------TPLSCENPSSW--- 328
+AALMYDAV++ A +KP +P L C + W
Sbjct: 348 SAQAALMYDAVFVLVEAFNKFLRKKPDRSNVRRTGIPGSSQITNGTRALDCNSSRGWVTP 407
Query: 329 -QHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGL 386
++G I L++ + I+G+TG I + GRR++++L VE + V + W G
Sbjct: 408 FEYGDKISRLLRKVEIEGLTGEIRFNDD-GRRHNYTLHVVEMTVNSAMVKVAEWTDEAGF 466
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNPETGELY------- 438
+ E +N+T VT+ EPY+M K ++GE+
Sbjct: 467 QAIAAKYIRLRPHAEIEKNKTYIVTT---------IVEEPYIMQKKSDSGEILTGNDSYE 517
Query: 439 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTI 497
GY DL +IA +L TY+ + ++ YG N G W+G++GEL + AD+AI +TI
Sbjct: 518 GYCKDLADLIAKKLGITYELRIVKDGKYGMENSDVPGGWDGMVGELIRKEADIAIAPMTI 577
Query: 498 TSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLF 557
TSER +DF+ PFM+LGISI+ +KP K++P +FSFL PLS ++WV + +Y+GVS++LF
Sbjct: 578 TSERERVIDFSKPFMSLGISIMIKKPIKQKPGVFSFLNPLSKEIWVCVIFSYIGVSIVLF 637
Query: 558 FLARIS 563
++R S
Sbjct: 638 TVSRFS 643
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 741 IYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPI 793
I S+ F + F+ + ++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI
Sbjct: 692 INSLWFALAAFMQQGCDISPRSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVAPI 751
Query: 794 KNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+ EDLA ++YG + GST +FF+
Sbjct: 752 NSPEDLASQTEVQYGTLSHGSTWDFFR 778
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S ++LY +M M +SR VFVK+ EG+ RV KGKYA +ES EY E+ CD
Sbjct: 778 RKSQINLYSKMWEFM-NSRKHVFVKTYDEGIRRVRTSKGKYALLIESPKNEYTNEREPCD 836
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 837 TMKVGRNLDAKGFGVATP 854
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 671 EPYMM-KNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+M K ++GE+ GY DL +IA +L TY+ + ++ YG N G
Sbjct: 496 EPYIMQKKSDSGEILTGNDSYEGYCKDLADLIAKKLGITYELRIVKDGKYGMENSDVPGG 555
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 556 WDGMVGEL 563
>gi|391346906|ref|XP_003747707.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Metaseiulus occidentalis]
Length = 962
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 282/579 (48%), Gaps = 69/579 (11%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ AV RINKD + L P++ + +Q+V +S AK+ C+ EG A IFGP
Sbjct: 51 AFKYAVMRINKD-RNLLPNVTFQYDIQYVPRGNSFRAAKMACHLIKEGAATIFGPSDPVV 109
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVYPESHLISKGISVIINDMDWDT 135
I+S+ DIPH+E+ D + T+ +N++P+S ++ + +++ ++W
Sbjct: 110 GGHIQSLADSLDIPHIESRLD-----LETDVKDFSINLHPDSQVMGNSLKDLVSYLNWTK 164
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSES 195
++Y+ +L+ LQ++ +RP P Q +++ L +I++
Sbjct: 165 IAVLYQDDISLINLQEL----------VRPFPPKNVEYQF-RRAENFTATLLDIRSRGIY 213
Query: 196 HILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVR 255
+++D + L+ ++ L DY+ Y +Y I A + +DFQ + NIT R
Sbjct: 214 SMIVDVRPENLTAFLRAILQIQL-NDYK-YHYHFATYDIEA--FNLEDFQYNFVNITAFR 269
Query: 256 MINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKP 315
M++ N +R+I+N + + G+++ + + EAAL +DAVY FA + L
Sbjct: 270 MVDSDNETVRAILND-MEKFTPYGQNILNKTNVITTEAALTFDAVYAFAHGMNDLSRATQ 328
Query: 316 L-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQW 374
L P+ +SCE SW G + NL+ + G+TG+I + G R S L+ ++ D+
Sbjct: 329 LRPSNVSCEEGLSWSEGTSLFNLISMVDYHGLTGKIRFNE--GNRTSLKLDLLKLRQDRL 386
Query: 375 KVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM----- 429
+G W + LN + N TL VT+ + P+MM
Sbjct: 387 VKVGEWTSHKRLN----IINHGAFHDFGTTNITLRVTT---------IESVPFMMPKKQK 433
Query: 430 --------------KNP-------ETGELY----GYSVDLIKMIANELNFTYKFVLEREN 464
K+P TG ++ GY +DL+ +A +L F Y L +N
Sbjct: 434 AAGGHQLDTSSDKGKDPGITGGFNRTGNIHEDYEGYIMDLLNKLAEKLGFHYDLYLVPDN 493
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
+G N T +WNG++ E+ E+ ADLA+ +TI R + +DFT PFM LGI IL++ P+
Sbjct: 494 KFGVENTTTLEWNGMVREIIEKNADLAVAPMTINFARESVIDFTKPFMNLGIQILFKLPS 553
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LFSF+ PL +W+Y+ AY+ VS +F +AR S
Sbjct: 554 GMPVRLFSFMSPLDTYIWMYVLCAYVLVSCTMFLVARFS 592
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STR+V +WWFFTLI+ISSYTANLAAFLT RM PI++VEDLA+ +I YG ++ G
Sbjct: 636 KATSTRMVGTIWWFFTLILISSYTANLAAFLTVERMITPIESVEDLAEQSKIAYGTLDSG 695
Query: 814 STRNFFK 820
ST FF+
Sbjct: 696 STMTFFR 702
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 71/105 (67%), Gaps = 5/105 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + LY++M M++ RPSVFV + +EGVERV++ G YAF MEST
Sbjct: 692 LDSGSTMTF-FRDSKLELYRKMWRYMKN-RPSVFVSTYEEGVERVLQ--GNYAFLMESTM 747
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y+V+++C+L +G LLD+KGYGI P S + K S L+
Sbjct: 748 LDYKVQRDCNLTAIGTLLDNKGYGIGTPIGSPWRDKLSLAILDLQ 792
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ------VDTFIL 738
GY +DL+ +A +L F Y L +N +G N T +WNG++ E+ E+ I
Sbjct: 468 GYIMDLLNKLAEKLGFHYDLYLVPDNKFGVENTTTLEWNGMVREIIEKNADLAVAPMTIN 527
Query: 739 FFIYSILFFIYTFVNEAVST--RLVAGM 764
F S++ F F+N + +L +GM
Sbjct: 528 FARESVIDFTKPFMNLGIQILFKLPSGM 555
>gi|195113051|ref|XP_002001083.1| GI22168 [Drosophila mojavensis]
gi|193917677|gb|EDW16544.1| GI22168 [Drosophila mojavensis]
Length = 900
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 173/565 (30%), Positives = 277/565 (49%), Gaps = 50/565 (8%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N D P+V E +S+H + +C G+ A+
Sbjct: 43 DRIRQTFEHAIAVVNSDLSV--------PLVGETEQVAYGNSVHAFEQLCRLMQNGVGAV 94
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP + + + C D+P F P+ P G N+YP I+ + II
Sbjct: 95 FGPAARHTAAHLLNACDAKDVP----FIYPHLSLSPQ--TDGFNLYPHPEDIAHALFDII 148
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKE 188
W F YE+ + L L ++ I+ R + + +Y+ +L+
Sbjct: 149 TKFGWSRFIFCYESSEYLTILDHLMTLYGTKGPVIKVMRYDLNLN------GNYKAVLRR 202
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
I+ S +S I++ S + +L+QA++V +M + Y++ ++ HT + ++++
Sbjct: 203 IRKSEDSRIVVVGSTEGVAELLRQAQQVGIMNEDYTYLVGN----LDLHTYELEEYKYSE 258
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
ANIT +RM +P +R ++ +E E +N + T+ + AL YDAV + A
Sbjct: 259 ANITGIRMFDPDKKEVRDLVETLQHEIGE-SEPMNNGSSTITLAMALTYDAVRVIAETTN 317
Query: 309 SLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITI--DGMTGRINLDSQTGRRNSFSL 364
L + P L+C E+ + Q G N M+S+ I +TGRI Q R FS
Sbjct: 318 FLPYQ---PQQLNCSEHHDNVQPDGSTFKNYMRSLDILDKTITGRIFF--QGNMRKRFSF 372
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
+ +E +GTW R +D EN T+ +KTF K+ +
Sbjct: 373 DVIELQPVGLVKVGTWEEGKDFEFKRPPPIIDLN-----ENEENTLVNKTF-KVLISVPN 426
Query: 425 EPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
+PY ++++ T + GY +DLIK +A++L F + F N YG+ N T G
Sbjct: 427 KPYASLVESINTLIGNDQYEGYGIDLIKELADKLGFNFTF-HNGGNDYGSFNKSTNMTTG 485
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ E ADLAI DLTITSER A+DF++PFM LGI+ILY KP K +P++FSF++P S
Sbjct: 486 MLKEIVEGHADLAITDLTITSEREEAIDFSIPFMNLGIAILYIKPQKAEPEIFSFMDPFS 545
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW+Y+ AYLGVSL LF L R+S
Sbjct: 546 KEVWLYLGIAYLGVSLCLFVLGRLS 570
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT + I +VEDLA+ ++YG
Sbjct: 614 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPSSSINSVEDLAENKDDVQYGAKRT 673
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 674 GSTRNFF 680
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M++ M ++ P + ++N+ GV++V K KYAF M
Sbjct: 666 VQYGAKRTGSTRNFFLTSEDPIYMKMNTYM-TNHPEMLTETNQAGVDKV-KAGTKYAFLM 723
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IEY + C L ++G LD KGYGIAMP + + + F A L + QG +KN
Sbjct: 724 ESTSIEYNTVRECTLKKIGEALDEKGYGIAMPKN-WPYRDKFNNALLELQEQGVLARLKN 782
>gi|195469375|ref|XP_002099613.1| GE14507 [Drosophila yakuba]
gi|194185714|gb|EDW99325.1| GE14507 [Drosophila yakuba]
Length = 675
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 285/578 (49%), Gaps = 59/578 (10%)
Query: 1 MKIVGIFG--PNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
++I IF P + AF A+ ++N D K++ P+ ++ +++V +DS T + +C
Sbjct: 23 VRIGAIFSNQPGKYNSEMAFRYAIHKLNMD-KSILPETTVDYYIEYVNRFDSFETVQKVC 81
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPE 116
G+ AIF P I S+C DIP++ H +NVYP
Sbjct: 82 KLIRVGVQAIFSPTDSVLATHINSICDALDIPNI------------GRSAHDFSINVYPS 129
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
++ + +I ++W F I++E + ++ L Q+ R V +RQ+
Sbjct: 130 QEYVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLS----------RSFNGEVHMRQVS 179
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ Y LKE K +I++D + + +LK + M +Y+ + L TS+ +
Sbjct: 180 RGS--YLYALKEFKGKEIHNIIIDTNSNDISILLKNILQ-QQMNEYKYHYL-FTSF--DL 233
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS----LNVRAETV-KI 291
T D +DF+ + NIT+ R+++ + ++ I+ + + ++ L+V+ T+ +
Sbjct: 234 ETYDLEDFKYNFVNITSFRLVDTGDVGVKQILKDIAFYSHHMFKNPFFNLHVKKSTILES 293
Query: 292 EAALMYDAVYLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
E ALM+D+VY+FA LQ+L + L + +SC+ W GL + N + ++ G+TG I
Sbjct: 294 EPALMFDSVYVFAIGLQTLEQSHSLSFSNISCDEEIPWNGGLSLINYLNAVEWKGLTGPI 353
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ ++ +G W LN + D N TL V
Sbjct: 354 QF--KDGHRVQFKLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSM----NVTLVV 407
Query: 411 TSKTFAKLRVLFQGEPYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENT 465
+ PY+M KN E YG+ VD+++ I+ E+ F Y L +
Sbjct: 408 ---------ITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 458
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+TG WNG++ +L + +ADLA+ +TIT R + +DFT PFM LGISIL++ P
Sbjct: 459 YGAKDPETGNWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTS 518
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ LFSF+ PL+ ++W+Y+ AY VS+ ++ + ++S
Sbjct: 519 EPTRLFSFMNPLAIEIWLYVLIAYFLVSISIYIVGKLS 556
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR+++ W FF+LI+++SYTANLAAFLT RM PI+N EDLA I YG ++ GS
Sbjct: 601 AMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGS 660
Query: 815 TRNFFKV 821
T FF+V
Sbjct: 661 TMTFFRV 667
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I+ E+ F Y L + YG +P+TG WNG++
Sbjct: 414 PYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGNWNGMV 473
Query: 727 GELQE 731
+L +
Sbjct: 474 AQLMK 478
>gi|348539606|ref|XP_003457280.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like
[Oreochromis niloticus]
Length = 1284
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 275/536 (51%), Gaps = 51/536 (9%)
Query: 42 VQHVENYDSLHTAKLMCNATSEGIAAIFGP-QSIENRNIIESMCQMFDIPHVEAFWDPNK 100
+Q YD+ T MC +G+ ++ GP S + + I +C +IPHV+ +
Sbjct: 293 LQKDSQYDTTDT---MCQILPKGVVSVIGPASSPASGSTISHICGEKEIPHVKIGPEETP 349
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
+P V +YP + +S I I++ + T ++I + L+ L++++
Sbjct: 350 K-LPYLRFASVTLYPSNEDLSLAIGSILHSFGYPTASLICAKAECLLRLEELV------- 401
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMG 220
+ R ++++R L D+ D PLLKEI++ + I++D + + IL++A E+ +
Sbjct: 402 RRFLISRETLSVRMLD-DSLDPTPLLKEIRDDKVATIIIDANASISYHILRKANELGMTS 460
Query: 221 DYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEEN 276
+ YIL+ + + + D +NI M+N ++P IRS+ W
Sbjct: 461 AFYKYILTTMDFPL----LRLDDVVDDQSNIVGFSMLNISHPFYLEFIRSLNLSW----- 511
Query: 277 ERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIG 335
G ++ + +ALM+DAV++ +A++ L + + PLSC +P WQHG +
Sbjct: 512 REGCDVSPYPGPA-LSSALMFDAVHVVVSAVRELNRSQEIGVKPLSCTSPLIWQHGTSLM 570
Query: 336 NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVE 393
N ++ + DG+TG I +S+ G+R +++L+ +E K +G W N +N +
Sbjct: 571 NYLRMVEYDGLTGHIEFNSK-GQRTNYTLKILEKHPAGHKEIGIWYSNNTLAMNST---- 625
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKM 447
+D E + N++L VT+ PY+M+ E G + VD+++
Sbjct: 626 SLDLNASETLANKSLIVTT---------ILENPYVMRKSNYQEYQGNDQYEGFCVDMLRE 676
Query: 448 IANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDF 507
+A+ L F++K L + YG P G W G++GEL ++ADLA+ TITSER +DF
Sbjct: 677 LADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAVAGFTITSEREKVIDF 735
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ PFMTLGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 736 SKPFMTLGISILYRVHLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLS 791
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M S +PSVFVKS +EG+ RV+ K YAF MEST EY NC+L
Sbjct: 903 NSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSK--YAFLMESTMNEYYRSLNCNLT 960
Query: 634 QVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S + + + G +L+
Sbjct: 961 QIGGLLDTKGYGIGMPLGSPYRDEITLGILQLQ 993
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + GS
Sbjct: 837 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNIQYGTIHGGS 896
Query: 815 TRNFF 819
T FF
Sbjct: 897 TMTFF 901
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ E G + VD+++ +A+ L F++K L + YG P G W G+
Sbjct: 649 PYVMRKSNYQEYQGNDQYEGFCVDMLRELADILKFSFKIKLVDDGLYGAPEPN-GSWTGM 707
Query: 726 IGEL 729
+GEL
Sbjct: 708 VGEL 711
>gi|195498265|ref|XP_002096449.1| GE25051 [Drosophila yakuba]
gi|194182550|gb|EDW96161.1| GE25051 [Drosophila yakuba]
Length = 902
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 281/570 (49%), Gaps = 60/570 (10%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYD---SLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N + P+V E D S+ +C G+ A+
Sbjct: 45 DRIRQTFEHAISVVNNELGV--------PLVGESEQVDYGNSIQAFSQLCRLMQSGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISV 126
FGP + + + + C DIP + W N G N++P I+ +
Sbjct: 97 FGPAARHTASHLLNACDSKDIPFIYPHLSWGSNP--------DGFNLHPSPEDIANALYD 148
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYR 183
I+N +W F YE+ + L L ++ R G I+ + D + +Y+
Sbjct: 149 IVNQFEWSRFIFCYESAEYLNILDHLM---------TRYGTKGPVIKVMRYDLNLNGNYK 199
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
+L+ I+ S +S I++ S +L+QA++V +M + YI+ +N HT D ++
Sbjct: 200 SVLRRIRKSEDSRIVVVGSTGGVAELLRQAQQVGIMNEDYTYIIGN----LNLHTFDLEE 255
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
++ ANIT +RM +P +R +M +++E +N + + ++ AL YDAV +
Sbjct: 256 YKYSEANITGIRMFSPDQEEVRDLMEK-LHQELGESEPVNSGSTFITMDMALTYDAVRVI 314
Query: 304 AAALQSLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITID--GMTGRINLDSQTGRR 359
A + L + P L+C E + Q G N M+S+ I +TGRI + +R
Sbjct: 315 AETTKHLPYQ---PQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGN--KR 369
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F+ + +E + +GTW R + ++ I++ +L +KTF L
Sbjct: 370 KGFTFDVIELQTSGLVKVGTWEEGMDFEFQRPPQAVNFND---IDDGSLV--NKTFVVL- 423
Query: 420 VLFQGEPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+ PY ++++ +T + GY VDLIK +A++L F + F + N YG+ N T
Sbjct: 424 ISVATMPYASLVESIDTLIGNNQYQGYGVDLIKELADKLGFNFTF-RDGGNDYGSFNKST 482
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+G++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF
Sbjct: 483 NSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSF 542
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW+Y+ AYLGVSL F + R+S
Sbjct: 543 MDPFSSEVWLYLGIAYLGVSLCFFIIGRLS 572
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA-KAGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT PI +V+DLA ++YG
Sbjct: 616 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRT 675
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 676 GSTRNFF 682
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ + ++ P + +++N++GV++V K KYAF M
Sbjct: 668 VQYGAKRTGSTRNFFSTSEEPIYIKMNEYL-NAHPEMLMENNQQGVDKV-KAGTKYAFLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDPLDEKGYGIAM-VKNWPYRDKFNKALLELQEQGVLARLKN 784
>gi|45549153|ref|NP_523485.3| glutamate receptor IIB [Drosophila melanogaster]
gi|45445014|gb|AAF52269.3| glutamate receptor IIB [Drosophila melanogaster]
Length = 913
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 276/581 (47%), Gaps = 47/581 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF A+ +N A+ P + L+ I ++V DS+ + C+
Sbjct: 25 IKIGAIFFDTEMKLADAFSAALEEVN----AINPALKLDAIKRYVTVDDSIVLQDISCDL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + N VNV P
Sbjct: 81 IGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSNRERMNHQLTVNVAPMELF 140
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L+ LQ +L I+ Q
Sbjct: 141 LSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIK--------MQEFE 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I N+ E +LLDC D V ++ + ++ G + + L+ L ++
Sbjct: 193 RGDDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGI 252
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF A VR+ P + ++ + + R SL + L+
Sbjct: 253 DGFYSRDFTVAVA---AVRIRTYVPPPVHDEIDVFDNSVDTRFSSLG---------SQLV 300
Query: 297 YDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
YD++ LF AL + +R P SC WQ G + MK IT + T R+
Sbjct: 301 YDSIVLFYNALLEISQRPGFYIPNFSC-GRGFWQPGPRLVEQMKQITPKMVKPPFKTQRL 359
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
+++ G+R F+LE + D +V WN F L N ++ ++Q + KE
Sbjct: 360 QINAD-GQREDFNLEVYNPIID--RVTHIWNKEFQLVDFEKLRENSTQALKQKRLQNKED 416
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI M+A E F + F
Sbjct: 417 FSQKPIRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPV 476
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 477 RDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 536
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
K + D+++FL P + +VW+++ A + + L F RI
Sbjct: 537 KEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRI 577
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV KG YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G LR+ +GE + ++N
Sbjct: 762 AVPLNADFRSNLSVGI--LRLSERGELFKLRN 791
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL+ WW F L++ +Y A LAAF+T++++ I ++ DL ++++G + G+T +
Sbjct: 627 RLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVY 686
Query: 819 F 819
F
Sbjct: 687 F 687
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI M+A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQL 498
>gi|194899712|ref|XP_001979402.1| GG15269 [Drosophila erecta]
gi|190651105|gb|EDV48360.1| GG15269 [Drosophila erecta]
Length = 902
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 278/570 (48%), Gaps = 60/570 (10%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N + P+V E +S+ +C G+ A+
Sbjct: 45 DRIRQTFEHAISVVNNELGV--------PLVGETEQVAYGNSIQAFSQLCRLMQSGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISV 126
FGP + + + + C DIP + W PN G N++P I +
Sbjct: 97 FGPAARHTASHLLNACDSKDIPFIYPHLSWGPNP--------DGFNLHPSPEDIGNALYD 148
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYR 183
IIN +W F YE+ + L L ++ R G I+ + D + +Y+
Sbjct: 149 IINKFEWSRFIFCYESAEYLKILDHLM---------TRYGIKGPVIKLMRYDLNLNGNYK 199
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
+L+ I+ S +S I++ S +L+QA++V +M + YI+ +N HT D ++
Sbjct: 200 SVLRRIRKSEDSRIVVVGSTAGVAELLRQAQQVGIMNEDYTYIIGN----LNLHTFDLEE 255
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
++ ANIT +RM +P +R +M +++E +N + + ++ AL YDAV +
Sbjct: 256 YKYSEANITGIRMFSPDQEEVRDLMEK-LHQELGESEPVNSGSTFITMDMALTYDAVRVI 314
Query: 304 AAALQSLGERKPLPTPLSC--ENPSSWQHGLGIGNLMKS--ITIDGMTGRINLDSQTGRR 359
+ L + P L+C + + G N M+S IT +TGRI + R
Sbjct: 315 GETTKHLPYQ---PQMLNCSERHDNVQPDGSTFRNYMRSLEITEKTITGRIYFEGNI--R 369
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F+ + +E + +GTW R + + I++ +L +KTF L
Sbjct: 370 KGFTFDVIELQTSGLVKVGTWEEGKNFEFQRPPQAV---SFNDIDDGSLV--NKTFIVL- 423
Query: 420 VLFQGEPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+ +PY ++++ +T + GY VDLIK +A++L F + F + N YG+ N T
Sbjct: 424 ISVATQPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTF-RDGGNDYGSFNKST 482
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+G++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF
Sbjct: 483 NSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSF 542
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW+Y+ AYLGVSL F + R+S
Sbjct: 543 MDPFSSEVWLYLGIAYLGVSLCFFIIGRLS 572
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA-KAGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT PI +V+DLA ++YG
Sbjct: 616 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIEYPTSPINSVKDLADNKDDVQYGAKRT 675
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 676 GSTRNFF 682
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ + ++ P + +++N++GV++V K KYA+ M
Sbjct: 668 VQYGAKRTGSTRNFFSTSEEPIYIKMNEYL-NAHPEMLMENNQQGVDKV-KSGTKYAYLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDPLDEKGYGIAM-VKNWPYRDKFNKALLELQEQGVLARLKN 784
>gi|227246|prf||1617121A Glu receptor 1
Length = 907
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF L+R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFVLSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|432879017|ref|XP_004073411.1| PREDICTED: glutamate receptor 3-like isoform 1 [Oryzias latipes]
Length = 882
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 281/579 (48%), Gaps = 52/579 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 24 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C V + PT+ + L
Sbjct: 84 FSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSY-------PTDNEVQFVIQMRPALR 136
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W F +Y+T LQ ++E A ++ + VT R + TD
Sbjct: 137 GAVLS-LLSHYKWQKFVYLYDTDRGFSILQAIMEAAVANNWQ-------VTARSVSSTTD 188
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
++R +++E+ E ++DC +D+ TIL+Q + +YIL+ +
Sbjct: 189 AAEFRRIIEEMDRRQEKRYVIDCEVDRINTILEQVVTLGKNSRGYHYILANLGF----SN 244
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANI+ +++NP NP ++ M W E + R +K +AL +D
Sbjct: 245 VSLDKVFAGGANISGFQIVNPENPIVQQFMQRW--ERLDEREFPEARNAPLKYTSALTHD 302
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K++ + GMTG I
Sbjct: 303 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKTVQVQGMTGNIQF 362
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE--KKEKIENRTLTV 410
D+ GRR +++++ E + + +G WN ++R V MD + +ENRT+ V
Sbjct: 363 DNY-GRRINYTIDVYEMKTGGPRKIGYWN-----EYTRFVNIMDPQVSNDSSVENRTIVV 416
Query: 411 TSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 417 TTIMEA---------PYVMYKKNFIHLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVMDG 467
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 468 KYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 527
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 566
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 680 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 739
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 740 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 784
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 614 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 673
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 674 STKEFFR 680
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 442 GYCVDLASEIAKHVGIKYKLSIVMDGKYGARDPETKTWNGMVGEL 486
>gi|432879019|ref|XP_004073412.1| PREDICTED: glutamate receptor 3-like isoform 2 [Oryzias latipes]
Length = 882
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 281/579 (48%), Gaps = 52/579 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 24 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C V + PT+ + L
Sbjct: 84 FSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSY-------PTDNEVQFVIQMRPALR 136
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W F +Y+T LQ ++E A ++ + VT R + TD
Sbjct: 137 GAVLS-LLSHYKWQKFVYLYDTDRGFSILQAIMEAAVANNWQ-------VTARSVSSTTD 188
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
++R +++E+ E ++DC +D+ TIL+Q + +YIL+ +
Sbjct: 189 AAEFRRIIEEMDRRQEKRYVIDCEVDRINTILEQVVTLGKNSRGYHYILANLGF----SN 244
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANI+ +++NP NP ++ M W E + R +K +AL +D
Sbjct: 245 VSLDKVFAGGANISGFQIVNPENPIVQQFMQRW--ERLDEREFPEARNAPLKYTSALTHD 302
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K++ + GMTG I
Sbjct: 303 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKTVQVQGMTGNIQF 362
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE--KKEKIENRTLTV 410
D+ GRR +++++ E + + +G WN ++R V MD + +ENRT+ V
Sbjct: 363 DNY-GRRINYTIDVYEMKTGGPRKIGYWN-----EYTRFVNIMDPQVSNDSSVENRTIVV 416
Query: 411 TSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 417 TTIMEA---------PYVMYKKNFIHLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVMDG 467
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 468 KYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 527
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 566
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 680 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 739
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 740 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 784
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 614 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 673
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 674 STKEFFR 680
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 442 GYCVDLASEIAKHVGIKYKLSIVMDGKYGARDPETKTWNGMVGEL 486
>gi|261278066|dbj|BAI44619.1| AMPA-selective glutamate receptor 1 flip type [Mus musculus]
Length = 907
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + I T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPIDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|215254225|gb|ACJ64117.1| GluR1 [Columba livia]
Length = 902
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 283/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALINVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +E++ E +++DC ++ IL + ++ G+ +YIL+ + +D
Sbjct: 184 GYRVLFQELEKKKERLVVVDCETERLNIILSKIIKLEKNGNGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W N+ V + K +AL YD V
Sbjct: 240 LTKFKESGANVTGFQLVNYTDAVPARIMQQW--RNNDAREHPRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A Q+L ++ C NP+ W G+ I ++ + +G++G + +
Sbjct: 298 RVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN L + ++ + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPA-AIDTQSGNESTSLQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
+Q + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 580 DQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 637
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG +E GST+ FF+
Sbjct: 638 LTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|194760910|ref|XP_001962675.1| GF15573 [Drosophila ananassae]
gi|190616372|gb|EDV31896.1| GF15573 [Drosophila ananassae]
Length = 981
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 287/579 (49%), Gaps = 43/579 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+++ IF E ++A AF+ AV +N A+ P + L+ I ++ DS+ ++ C+
Sbjct: 25 LRVGAIFFDTEMKLAEAFDAAVEEVN----AINPSLKLDAIKHYLTIDDSIVLQEISCDL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+ AIFGP S N +I+E +C IPH++ W P K N +NV P +
Sbjct: 81 IGNGVVAIFGPSSKTNSDIVEVLCNTTGIPHLQFDWPPQKSAREGLNHQMTINVAPMELI 140
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S I ++ +W++FT++YE NL LQ +L K++ + + IRQ
Sbjct: 141 LSTAILDVLASKSFNWNSFTLVYEKGTNLNRLQHILAW-----KQLH--KTGIKIRQFE- 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
DDYR L K+I ++E ++LLDC D V ++ + ++ G + + L LT+ +
Sbjct: 193 RGDDYRVLWKQISTANEKYVLLDCPPDILVNVINASIGFNMTGAFNH--LFLTNLDTHIS 250
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D + +I +R+ N P + ++ + E ++R SL E L+Y
Sbjct: 251 GIDRFYSKEFTVSIAAIRIRNYIPPPVHDEIDVFDNEVDDRFNSL---------ETQLLY 301
Query: 298 DAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM-----TGRINL 352
D+V LF AL L +R P + WQ G + MK+I+ T ++++
Sbjct: 302 DSVVLFYNALLELSQRSGFYAPQTRCGLGFWQPGPRLVEQMKNISPKQAKPPFKTQKLHI 361
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL-NHSRTVEQMDKEKKEKIENRTLTVT 411
++ G+R+ F+L+ + D +V WN F L ++ + E + K+K + +
Sbjct: 362 NAD-GQRDDFNLDVYNPIID--RVNYIWNKEFQLVSYEKIRENSTQAMKQKRLEDKVDFS 418
Query: 412 SKTFAKLRVLFQGEPYM--MKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERE 463
K GEPY + PE GY VDLI +A E F + F ++
Sbjct: 419 QKPVRYKIATRVGEPYFSWREEPEGVHYEGNDRFEGYVVDLIYDLAQECKFEFDFEPVKD 478
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
N YG+ +P T +W+G+I L + A + ICDLTIT RR+ VDFT+PFM LGISIL K
Sbjct: 479 NKYGSYDPTTDEWDGIIRALIDNHAQIGICDLTITQARRSVVDFTVPFMQLGISILAYKK 538
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
+P+ + FL+P +F+VW+Y+ A + ++ L R+
Sbjct: 539 PPPEPNEYGFLKPYNFEVWLYVIIAMVISAIALIITGRM 577
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F KSN+EGV+RV KG YAF ME+T ++Y V++N DL+Q+G K YGI
Sbjct: 702 MLSFKPDAFTKSNEEGVKRVKVSKGTYAFLMETTSLQYHVQRNLDLIQIGEAFGQKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P S+F + S G LR+ +G Y +N
Sbjct: 762 AVPLNSQFRSNLSVGI--LRLSEKGRLYYFRN 791
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
V RL+ WW F L++ +Y A LAAF+T+++++ I ++ DL ++++G + G
Sbjct: 622 RGVPMRLLTAFWWIFALLVSQTYIAKLAAFVTSSKISNDIASLHDLVDQNKVQFGTIRGG 681
Query: 814 STRNFF 819
+T +F
Sbjct: 682 ATSVYF 687
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 670 GEPYM--MKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
GEPY + PE GY VDLI +A E F + F ++N YG+ +P T +
Sbjct: 431 GEPYFSWREEPEGVHYEGNDRFEGYVVDLIYDLAQECKFEFDFEPVKDNKYGSYDPTTDE 490
Query: 722 WNGLIGEL 729
W+G+I L
Sbjct: 491 WDGIIRAL 498
>gi|332021308|gb|EGI61687.1| Glutamate receptor, ionotropic kainate 2 [Acromyrmex echinatior]
Length = 942
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 302/597 (50%), Gaps = 100/597 (16%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVE-NYDSLHTAKLMCNATSE 63
IF EE++ + FE A+ + AL +++ P+++++E N DS TAK C E
Sbjct: 82 AIFHKGEEDLESVFERAISDTKNENYALTFELV--PVIKYIESNIDSFMTAKATCELLEE 139
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP--TNGVHGVNVYPESHLIS 121
G+AAIFGP S I+ S+ F IPH+E W + T+ +N++P S IS
Sbjct: 140 GVAAIFGPSSRYTSGIVASIAARFKIPHIEYVWREREKKKKKKTSPSMTINIFPASEQIS 199
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP----- 176
+ I+ +I+ M W F IYET + L LQ+ L T+++ P
Sbjct: 200 QAIADVIDSMKWQKFVAIYETDEGLSRLQKTL-----------------TLKEYPIIHTV 242
Query: 177 ---PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
+ DYR +LK+I++ +I++D + +L QAKEV+L+ DY N++++
Sbjct: 243 WKLNEGSDYRSMLKKIRHLPVCNIIIDVKPKNIMKVLHQAKEVNLLADYCNFVIT----- 297
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVK--- 290
Y +I+ + + N ++ +I+N L++R V+
Sbjct: 298 --------------YLDISMLPIAKMRN-NVNTIVNI---------TGLSIRENDVEKID 333
Query: 291 -IEAALMYDAVYLFAAALQSLGERKPL--------PTPLSCENPSS-WQHGLGIGNLMKS 340
+++ ++YDAV+L AL++L R P SC N ++ ++ G I ++M+
Sbjct: 334 GLDSMVLYDAVFLLHKALETLNARNSKNKVYMSIDPIRFSCINKTTLYEAGPNIISVMQK 393
Query: 341 ITIDG-MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEK 399
I+ G +TG + +D + GRR F+++ + + + W+ G++ ++ E+ D +
Sbjct: 394 ISKKGKITGNMCID-KYGRRQRFNVKILNFQQSDVIQMSYWDFN-GIHATQIKEKKDIDL 451
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMMK---NPETGELY------GYSVDLIKMIAN 450
+ ++ + ++ K A PY+M+ GEL G+ +DLI IA
Sbjct: 452 HKFMKEKIFKISIKISA---------PYIMEVTDGSTRGELIDWKRYEGFCIDLINHIAK 502
Query: 451 ELNF---TYKFVLERENTYGTLNPQTGKWN-GLIGELQEQRADLAICDLTITSERRAAVD 506
L F ++ V +R YG + QT W+ GLI + ADLAI DLTITS R + VD
Sbjct: 503 HLRFKGVVFQLVNDR---YGFYDSQTKTWHRGLIKSILNNEADLAISDLTITSFRESVVD 559
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F++PFMT G SI++ KP KK P LF FL PLS VW+YMA AYL VS++LF AR++
Sbjct: 560 FSLPFMTSGYSIMFSKPEKKVPPLFPFLLPLSTKVWIYMAIAYLVVSIMLFVQARMA 616
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 15/170 (8%)
Query: 511 FMTLGISILYRKPAKKQ-PDLFSFLEPLSFDVWVYMATAYLGVSLL---LFFLARISSGS 566
FM G +IL + + + ++ F + + ++ A+L V + + + + S
Sbjct: 651 FMQQGSNILPKASSLRMLTSMWCFFTLIIYSLYTANLAAFLTVDKMDPPIKGIEDLPKQS 710
Query: 567 RLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFF 616
+++Y A KNSN S Y+++ + M +SRPSVF + +EG+ RV+ K +YAF
Sbjct: 711 KIKYGALRGGATAAFFKNSNYSTYKQIWAVMANSRPSVFTSTIEEGINRVLNSKRQYAFL 770
Query: 617 MESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLR 665
MEST IEY E+ CD++++G +L ++GYGIAMP S + ++ +LR
Sbjct: 771 MESTTIEYNTERKCDIIKIGNVLGNRGYGIAMPRNSPYKTHINYAILRLR 820
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F I FF+ N +A S R++ MW FFTLI+ S YTANLAAFLT +M+PPIK +
Sbjct: 644 FFLIISFFMQQGSNILPKASSLRMLTSMWCFFTLIIYSLYTANLAAFLTVDKMDPPIKGI 703
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
EDL K +IKYG + G+T FFK
Sbjct: 704 EDLPKQSKIKYGALRGGATAAFFK 727
>gi|164419726|ref|NP_990546.2| glutamate receptor, ionotrophic, AMPA 3 isoform 2 precursor [Gallus
gallus]
Length = 888
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 289/583 (49%), Gaps = 59/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT+ V +
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFITPS---FPTDA--DVQFVIQMRPA 138
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
KG I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 139 LKGAILSLLTYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----DV 193
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINA 236
++R +++E+ E L+DC +D+ TIL+Q V ++G + +Y+L+ +
Sbjct: 194 QEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQ---VVILGKHSRGYHYMLANLGF---- 246
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAAL 295
+ + G AN+T +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 247 TDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKN---SPLKYTSAL 303
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DAV + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 304 THDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGN 363
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENR 406
I D+ GRR +++++ E + + G WN + R T++Q+ +ENR
Sbjct: 364 IQFDTY-GRRTNYTIDVYEMKASGSRKAGYWN-----EYERFVPTLDQLPSNDTSSVENR 417
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 418 TIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSI 468
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 469 VGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMI 528
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 529 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|164419728|ref|NP_001106270.1| glutamate receptor, ionotrophic, AMPA 3 isoform 1 precursor [Gallus
gallus]
Length = 888
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 289/583 (49%), Gaps = 59/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT+ V +
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFITPS---FPTDA--DVQFVIQMRPA 138
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
KG I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 139 LKGAILSLLTYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----DV 193
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINA 236
++R +++E+ E L+DC +D+ TIL+Q V ++G + +Y+L+ +
Sbjct: 194 QEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQ---VVILGKHSRGYHYMLANLGF---- 246
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAAL 295
+ + G AN+T +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 247 TDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKN---SPLKYTSAL 303
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DAV + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 304 THDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGN 363
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENR 406
I D+ GRR +++++ E + + G WN + R T++Q+ +ENR
Sbjct: 364 IQFDTY-GRRTNYTIDVYEMKASGSRKAGYWN-----EYERFVPTLDQLPSNDTSSVENR 417
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 418 TIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSI 468
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 469 VGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMI 528
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 529 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|348516808|ref|XP_003445929.1| PREDICTED: glutamate receptor 3-like isoform 2 [Oreochromis
niloticus]
Length = 882
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 281/579 (48%), Gaps = 52/579 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 24 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C V + PT+ + L
Sbjct: 84 FSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSY-------PTDNEVQFVIQMRPALR 136
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W F +Y+T LQ ++E A ++ + VT R + TD
Sbjct: 137 GAVLS-LLSHYKWQKFVYLYDTDRGFSILQAIMEAAVANNWQ-------VTARSVSSTTD 188
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+++ +++E+ E ++DC +D+ TIL+Q + +YIL+ +
Sbjct: 189 AAEFKRIIEEMDRRQEKRYVIDCEVDRINTILEQVVTLGKNSRGYHYILANLGF----SN 244
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANI+ +++NP NP ++ + W E + R +K +AL +D
Sbjct: 245 VSLDKVFAGGANISGFQIVNPENPIVQQFIQRW--ERLDEREFPEARNAPLKYTSALTHD 302
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K++ + GMTG I
Sbjct: 303 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKTVQVQGMTGNIQF 362
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE--KKEKIENRTLTV 410
D+ GRR +++++ E + + +G WN +SR V MD + +ENRT+ V
Sbjct: 363 DNY-GRRTNYTIDVYEMKTGGPRKIGYWN-----EYSRFVNIMDLQVSNDSSVENRTIVV 416
Query: 411 TSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 417 TTIMEA---------PYVMYKKNYMHLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVMDG 467
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+AI LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 468 KYGARDPETKTWNGMVGELVYGRADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 527
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 566
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 680 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 739
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 740 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 784
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 614 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 673
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 674 STKEFFR 680
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 442 GYCVDLASEIAKHVGIKYKLSIVMDGKYGARDPETKTWNGMVGEL 486
>gi|149052677|gb|EDM04494.1| glutamate receptor, ionotropic, AMPA1 (alpha 1), isoform CRA_b
[Rattus norvegicus]
Length = 907
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDSRDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|164664512|ref|NP_001106796.1| glutamate receptor 1 isoform 1 precursor [Mus musculus]
gi|121430|sp|P23818.1|GRIA1_MOUSE RecName: Full=Glutamate receptor 1; Short=GluR-1; AltName:
Full=AMPA-selective glutamate receptor 1; AltName:
Full=GluR-A; AltName: Full=GluR-K1; AltName:
Full=Glutamate receptor ionotropic, AMPA 1; Short=GluA1;
Flags: Precursor
gi|51080|emb|CAA40734.1| glutamate receptor 1 [Mus musculus]
Length = 907
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|261278068|dbj|BAI44620.1| AMPA-selective glutamate receptor 1 flop type [Mus musculus]
Length = 907
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANRFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 53/72 (73%)
Query: 749 YTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYG 808
Y ++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG
Sbjct: 603 YDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYG 662
Query: 809 CVEMGSTRNFFK 820
+E GST+ FF+
Sbjct: 663 TLEAGSTKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANRFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|348516806|ref|XP_003445928.1| PREDICTED: glutamate receptor 3-like isoform 1 [Oreochromis
niloticus]
Length = 882
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 281/579 (48%), Gaps = 52/579 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 24 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C V + PT+ + L
Sbjct: 84 FSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSY-------PTDNEVQFVIQMRPALR 136
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W F +Y+T LQ ++E A ++ + VT R + TD
Sbjct: 137 GAVLS-LLSHYKWQKFVYLYDTDRGFSILQAIMEAAVANNWQ-------VTARSVSSTTD 188
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+++ +++E+ E ++DC +D+ TIL+Q + +YIL+ +
Sbjct: 189 AAEFKRIIEEMDRRQEKRYVIDCEVDRINTILEQVVTLGKNSRGYHYILANLGF----SN 244
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANI+ +++NP NP ++ + W E + R +K +AL +D
Sbjct: 245 VSLDKVFAGGANISGFQIVNPENPIVQQFIQRW--ERLDEREFPEARNAPLKYTSALTHD 302
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K++ + GMTG I
Sbjct: 303 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKTVQVQGMTGNIQF 362
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE--KKEKIENRTLTV 410
D+ GRR +++++ E + + +G WN +SR V MD + +ENRT+ V
Sbjct: 363 DNY-GRRTNYTIDVYEMKTGGPRKIGYWN-----EYSRFVNIMDLQVSNDSSVENRTIVV 416
Query: 411 TSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 417 TTIMEA---------PYVMYKKNYMHLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVMDG 467
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+AI LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 468 KYGARDPETKTWNGMVGELVYGRADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 527
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 566
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 680 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 739
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 740 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 784
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 614 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 673
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 674 STKEFFR 680
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 442 GYCVDLASEIAKHVGIKYKLSIVMDGKYGARDPETKTWNGMVGEL 486
>gi|29789269|ref|NP_113796.1| glutamate receptor 1 precursor [Rattus norvegicus]
gi|97536283|sp|P19490.2|GRIA1_RAT RecName: Full=Glutamate receptor 1; Short=GluR-1; AltName:
Full=AMPA-selective glutamate receptor 1; AltName:
Full=GluR-A; AltName: Full=GluR-K1; AltName:
Full=Glutamate receptor ionotropic, AMPA 1; Short=GluA1;
Flags: Precursor
gi|3402257|emb|CAA35050.1| glutamate receptor, AMPA subtype, GluR1 [Rattus norvegicus]
gi|84373698|gb|AAA41243.2| glutamate receptor GluR-A [Rattus norvegicus]
gi|149052676|gb|EDM04493.1| glutamate receptor, ionotropic, AMPA1 (alpha 1), isoform CRA_a
[Rattus norvegicus]
Length = 907
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDSRDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|48994235|ref|NP_001001774.1| glutamate receptor 1 precursor [Gallus gallus]
gi|987860|emb|CAA61681.1| AMPA receptor GluR1/A [Gallus gallus]
Length = 902
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 166/576 (28%), Positives = 282/576 (48%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +E++ E +++DC ++ IL + ++ G+ +YIL+ + +D
Sbjct: 184 GYRVLFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSL-NVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W N R L V + K +AL YD
Sbjct: 240 LTKFRESGANVTGFQLVNYTDTVPARIMQQW---RNNDARELPRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A Q+L ++ C NP+ W G+ I ++ + +G++G + +
Sbjct: 297 VRVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN L Q E ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPVAIDTQTGNESTS-LQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|357619803|gb|EHJ72235.1| hypothetical protein KGM_01297 [Danaus plexippus]
Length = 665
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 267/514 (51%), Gaps = 36/514 (7%)
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ EGI AI + +++S+C + +IP + + N YF T + VN++P
Sbjct: 67 ICSLVEEGIFAIIEGLGGKATELVQSLCDILEIPLI--VLEDNDYFARTWSL--VNLFPS 122
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+ + +I +W FTI+Y +L + +++ + DK +VTIR+L
Sbjct: 123 PVAFNMALENLILMKNWRNFTILYVKGHSLTKVHSLMKMGYPTDKF------TVTIREL- 175
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ DYR L + S + + ++DC IL+QA++V LM D +YI +
Sbjct: 176 -NGTDYRDTLISCRKSGQVNFVVDCPSANLEQILQQAQQVGLMADEHSYIFVSP----DL 230
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAAL 295
T++ ++ G N+T R+I+ + W Y N S NV +K ++ L
Sbjct: 231 FTINLDRYRYGGVNMTGFRLIDLSKNEFL-----WDYVTNYNTESGFNVEPYELKAKSIL 285
Query: 296 MYDAVYLFAAALQSLGERKPLP----TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
+ DA+ + + AL L + P LSCEN SWQ G + N MK+ I+G+T +
Sbjct: 286 IRDAILVISDALSKLNQNNLFPKLESQSLSCENYESWQFGSTLINFMKTNKIEGVTRTLI 345
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI-ENRTLTV 410
D G+RN ++ +E + +G W++ GL R + +E I N+T V
Sbjct: 346 FDG-FGQRNDVIMDILELTPAGNQTIGNWSSE-GLILDRPFVPAAEIVEETIMRNKTFKV 403
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTL 469
T A + + K E + Y G+++DLI+ ++ L F Y+F E E+ YGT+
Sbjct: 404 LISTTAPYGYIKNSD----KRLEGNDRYEGFTIDLIEKLSEMLGFNYEF--EIESDYGTI 457
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T KW G++ +L+E++AD AICD TIT+ER+ +DF+ PFMTLGI ILY++P+K+ P+
Sbjct: 458 DSVTHKWTGMVPKLREEKADFAICDFTITAERQNEIDFSTPFMTLGIGILYKEPSKQPPE 517
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSF+ S +VW YM G+ +++ F+ RIS
Sbjct: 518 MFSFMAVFSKEVWYYMMLVQAGLGVIMIFVGRIS 551
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A++ R++ +WWFFT++M++SY L AFLT + P VE+L I YGC GS
Sbjct: 596 ALAPRIITSVWWFFTMVMVASYVGTLVAFLTVEKNVLPFTTVEELHAHKSISYGCKSKGS 655
Query: 815 TRNFFKV 821
T+ FF+V
Sbjct: 656 TKQFFQV 662
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTFIL 738
G+++DLI+ ++ L F Y+F E E+ YGT++ T KW G++ +L+E+ F +
Sbjct: 429 GFTIDLIEKLSEMLGFNYEF--EIESDYGTIDSVTHKWTGMVPKLREEKADFAI 480
>gi|195576781|ref|XP_002078252.1| GD23353 [Drosophila simulans]
gi|194190261|gb|EDX03837.1| GD23353 [Drosophila simulans]
Length = 913
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 275/581 (47%), Gaps = 47/581 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF A+ +N A+ P + LE I ++V DS+ + C+
Sbjct: 25 VKIGAIFFDTEMKLADAFSAALEEVN----AVNPALKLEAIKRYVTVDDSIVLQDISCDL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + N VNV P
Sbjct: 81 VGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSSRERMNHQLTVNVAPMELF 140
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L+ LQ +L I+ Q
Sbjct: 141 LSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIK--------MQEFE 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I N+ E +LLDC D V ++ + ++ G + + L+ L ++
Sbjct: 193 RGDDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGI 252
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF A VR+ P + ++ + + R SL + L+
Sbjct: 253 DGFYSRDFTVAVA---AVRIRTYVPPPVHDEIDVFDNSVDTRFSSLG---------SQLV 300
Query: 297 YDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
YD++ LF AL + + P SC WQ G + MK IT + T R+
Sbjct: 301 YDSIVLFYNALLEISQLPGFYIPNFSC-GRGFWQPGPRLVEQMKQITPKMVKPPFKTQRL 359
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
+++ G+R F+LE + D +V WN F L N ++ ++Q + KE
Sbjct: 360 QINAD-GQREDFNLEVYNPIID--RVTHIWNKEFQLVDFEKLRENSTQALKQKRLQNKED 416
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI M+A E F + F
Sbjct: 417 FSQKPIRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPV 476
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 477 RDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 536
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
K + D+++FL P + +VW+++ A + + L F RI
Sbjct: 537 KEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRI 577
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV KG YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G LR+ +GE + ++N
Sbjct: 762 AVPLNADFRSNLSVGI--LRLSERGELFKLRN 791
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL+ WW F L++ +Y A LAAF+T++++ I ++ DL ++++G + G+T +
Sbjct: 627 RLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVY 686
Query: 819 F 819
F
Sbjct: 687 F 687
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI M+A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQL 498
>gi|24648478|ref|NP_651982.1| KaiRIA [Drosophila melanogaster]
gi|6687413|emb|CAB64941.1| ionotropic glutamate receptor subunit IA [Drosophila melanogaster]
gi|6687415|emb|CAB64942.1| ionotropic glutamate receptor subunit IA [Drosophila melanogaster]
gi|23176014|gb|AAG22164.2| KaiRIA [Drosophila melanogaster]
gi|55667944|gb|AAV54100.1| GluRIID [Drosophila melanogaster]
gi|55667946|gb|AAV54101.1| GluRIID [Drosophila melanogaster]
Length = 902
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 281/570 (49%), Gaps = 60/570 (10%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N + P+V E +S+ +C G+ A+
Sbjct: 45 DRIRQTFEHAISVVNNELGV--------PLVGETEQVAYGNSVQAFAQLCRLMQSGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISV 126
FGP + + + + C DIP + W N G N++P I+ +
Sbjct: 97 FGPAARHTASHLLNACDSKDIPFIYPHLSWGSNP--------DGFNLHPSPEDIANALYD 148
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYR 183
I+N +W F YE+ + L L ++ R G I+ + D + +Y+
Sbjct: 149 IVNQFEWSRFIFCYESAEYLKILDHLM---------TRYGIKGPVIKVMRYDLNLNGNYK 199
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
+L+ I+ S +S I++ S +L+QA++V +M + YI+ +N HT D ++
Sbjct: 200 SVLRRIRKSEDSRIVVVGSTTGVAELLRQAQQVGIMNEDYTYIIGN----LNLHTFDLEE 255
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
++ ANIT +RM +P +R +M +++E +N + + +E AL YDAV +
Sbjct: 256 YKYSEANITGIRMFSPDQEEVRDLMEK-LHQELGESEPVNSGSTFITMEMALTYDAVRVI 314
Query: 304 AAALQSLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITID--GMTGRINLDSQTGRR 359
A + L + P L+C E + Q G N M+S+ I +TGRI + R
Sbjct: 315 AETTKHLPYQ---PQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNV--R 369
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F+ + +E + +GTW R + ++ I++ +L +KTF L
Sbjct: 370 KGFTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFND---IDDGSLV--NKTFIVL- 423
Query: 420 VLFQGEPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+ +PY ++++ +T + GY VDLIK +A++L F + F + N YG+ N T
Sbjct: 424 ISVATKPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTF-RDGGNDYGSFNKTT 482
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+G++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF
Sbjct: 483 NSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSF 542
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW+Y+ AYLGVSL F + R+S
Sbjct: 543 MDPFSSEVWLYLGIAYLGVSLCFFIIGRLS 572
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA-KAGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT PI +V+DLA ++YG
Sbjct: 616 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRT 675
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 676 GSTRNFF 682
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ + ++ P + +++N++GV++V K KYAF M
Sbjct: 668 VQYGAKRTGSTRNFFSTSEEPIYIKMNEYL-NAHPEMLMENNQQGVDKV-KSGTKYAFLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDPLDEKGYGIAM-VKNWPYRDKFNKALLELQEQGVLARLKN 784
>gi|34328128|ref|NP_032191.2| glutamate receptor 1 isoform 2 precursor [Mus musculus]
gi|33604242|gb|AAH56397.1| Glutamate receptor, ionotropic, AMPA1 (alpha 1) [Mus musculus]
Length = 907
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|195342769|ref|XP_002037971.1| GM18562 [Drosophila sechellia]
gi|194132821|gb|EDW54389.1| GM18562 [Drosophila sechellia]
Length = 911
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 276/581 (47%), Gaps = 47/581 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF A+ +N A+ P + LE I ++V DS+ + C+
Sbjct: 23 VKIGAIFFDTEMKLADAFSAALEEVN----AVNPALKLEAIKRYVTVDDSIVLQDISCDL 78
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + N VNV P
Sbjct: 79 IGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSSRERMNHQLTVNVAPMELF 138
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L+ LQ +L I+ Q
Sbjct: 139 LSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIK--------MQEFE 190
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I N+ E +LLDC D V ++ + ++ G + + L+ L ++
Sbjct: 191 RGDDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGI 250
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF A VR+ P + ++ + + R SL + L+
Sbjct: 251 DGFYSRDFTVAVA---AVRIRTYVPPPVHDEIDVFDNSVDTRFSSLG---------SQLV 298
Query: 297 YDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
YD++ LF AL + + P SC WQ G + MK IT + T R+
Sbjct: 299 YDSIVLFYNALLEISQLPGFYIPNFSC-GRGFWQPGPRLVEQMKQITPKMVKPPFKTQRL 357
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
+++ G+R+ F+LE + D +V WN F L N ++ ++Q + KE
Sbjct: 358 QINAD-GQRDDFNLEVYNPIID--RVTHIWNKEFQLVDFEKLRENSTQALKQKRLQNKED 414
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI M+A E F + F
Sbjct: 415 FSQKPIRYTVATRVGKPYFSWREEPEGVHFEGNERFEGYAVDLIYMLAQECKFDFNFEPV 474
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 475 RDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 534
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
K + D+++FL P + +VW+++ A + + L F RI
Sbjct: 535 KEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRI 575
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV KG YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 700 MLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 759
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G LR+ +GE + ++N
Sbjct: 760 AVPLNADFRSNLSVGI--LRLSERGELFKLRN 789
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL+ WW F L++ +Y A LAAF+T++++ I ++ DL ++++G + G+T +
Sbjct: 625 RLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVY 684
Query: 819 F 819
F
Sbjct: 685 F 685
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI M+A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 452 GYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQL 496
>gi|224098038|ref|XP_002196613.1| PREDICTED: glutamate receptor 3 [Taeniopygia guttata]
Length = 888
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 174/583 (29%), Positives = 288/583 (49%), Gaps = 59/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT+ V +
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFITPS---FPTDA--DVQFVIQMRPA 138
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
KG I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 139 LKGAILSLLTYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----DV 193
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINA 236
++R +++E+ E L+DC +D+ TIL+Q V ++G + +Y+L+ Y
Sbjct: 194 QEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQ---VVILGKHSRGYHYMLANLGY---- 246
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAAL 295
+ + G ANIT +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 247 TDIVLERVMHGGANITGFQIVNNENPMVQQFLQRWMRLDEREFPEAKN---SPLKYTSAL 303
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DAV + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 304 THDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGN 363
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIENR 406
I D+ GRR +++++ E + + G WN + R V +D+ +ENR
Sbjct: 364 IQFDTY-GRRTNYTIDVYEMKAAGSRKAGYWN-----EYERYVPALDQLPSNDTSSVENR 417
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 418 TIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSI 468
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 469 VGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMI 528
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 529 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|327274023|ref|XP_003221778.1| PREDICTED: glutamate receptor 2-like [Anolis carolinensis]
Length = 883
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 170/580 (29%), Positives = 288/580 (49%), Gaps = 55/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + D L + ++E +S C+
Sbjct: 27 VQIGGLFPRGADQEYSAFRVGLVQFS------TSDFRLTSHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVFAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I DW+ F +Y++ L LQ VL+ A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYDWNKFAYLYDSDRGLSTLQAVLDTAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I++Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERQVILDCERDKVNDIVEQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
+ D Q G AN++ ++++ +P + + W EE E T+K +AL
Sbjct: 243 NDGDLSKIQFGGANVSGFQIVDYDDPLVSKFIQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + AA ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 300 TYDAVKVMDAAFRNLRKQRVEISRRGNAGDCLANPAVPWSHGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E S + +G W+ L T + + +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINVMELKSTGPRKIGYWSELDKLVVIPT-DGLAGNDSSGLENKTIV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ PY+M E E Y GY VDL IA F YK + +
Sbjct: 418 VTT---------IMESPYVMAKKNIDLLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVAD 468
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 469 GKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKP 528
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 529 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + ++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIQVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M E E Y GY VDL IA F YK + + YG + +T WNG+
Sbjct: 425 PYVMAKKNIDLLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVADGKYGARDAETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|195569399|ref|XP_002102697.1| GD20046 [Drosophila simulans]
gi|194198624|gb|EDX12200.1| GD20046 [Drosophila simulans]
Length = 902
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 279/561 (49%), Gaps = 54/561 (9%)
Query: 18 FEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENR 77
FE A+ +N + + L + V +S+ +C G+ A+FGP +
Sbjct: 51 FEHAISVVNNELG-----VPLAGETEQVAYGNSVQAFAQLCRLMQSGVGAVFGPAARHTA 105
Query: 78 NIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDT 135
+ + + C DIP + W N G N++P I+ + I+N +W
Sbjct: 106 SHLLNACDSKDIPFIYPHLSWGSNP--------DGFNLHPSPEDIANALYDIVNQFEWSR 157
Query: 136 FTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLLKEIKNS 192
F YE+ + L L ++ R G I+ + D + +Y+ +L+ I+ S
Sbjct: 158 FIFCYESAEYLKILDHLM---------TRYGIKGPVIKVMRYDLNLNGNYKSVLRRIRKS 208
Query: 193 SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANIT 252
+S I++ S +L+QA++V +M + YI+ +N HT D ++++ ANIT
Sbjct: 209 EDSRIVVVGSTTGVAELLRQAQQVGIMNEDYTYIIGN----LNLHTFDLEEYKYSEANIT 264
Query: 253 TVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+RM +P +R +M +++E +N + + +E AL YDAV + A + L
Sbjct: 265 GIRMFSPDQEEVRDLMEK-LHQELGESEPVNSGSTFITMEMALTYDAVRVIAETTKHLLY 323
Query: 313 RKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITID--GMTGRINLDSQTGRRNSFSLEFVE 368
+ P L+C E + Q G N M+S+ I +TGRI + R F+ E +E
Sbjct: 324 Q---PQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNV--RKGFTFEVIE 378
Query: 369 YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY- 427
+ +GTW R + ++ I++ +L +KTF L + +PY
Sbjct: 379 LQTSGLVKVGTWEEGKDFEFQRPPQAVNFND---IDDGSLV--NKTFVVL-ISVATKPYA 432
Query: 428 -MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 482
++++ +T + GY VDLIK +A++L F + F + N YG+ N T +G++ E
Sbjct: 433 SLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTF-RDGGNDYGSFNKTTNSTSGMLKE 491
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF++P S +VW
Sbjct: 492 IVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFMDPFSSEVW 551
Query: 543 VYMATAYLGVSLLLFFLARIS 563
+Y+ AYLGVSL F + R+S
Sbjct: 552 LYLGIAYLGVSLCFFIIGRLS 572
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA-KAGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT PI +V+DLA ++YG
Sbjct: 616 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRT 675
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 676 GSTRNFF 682
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ + ++ P + +++N++GV++V K KYAF M
Sbjct: 668 VQYGAKRTGSTRNFFSTSEEPIYIKMNEYL-NAHPEMLMENNQQGVDKV-KSGTKYAFLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDPLDEKGYGIAM-VKNWPYRDKFNKALLELQEQGVLARLKN 784
>gi|38511947|gb|AAH60702.1| Gria1 protein, partial [Mus musculus]
Length = 906
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 284/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 24 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 76
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 77 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 129 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 182
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 183 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 238
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 239 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTYDGV 296
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 355
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 356 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 412
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 413 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 465
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 466 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 525
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 608 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 667
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 668 TKEFFR 673
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 673 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 732
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 733 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 777
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 416 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 475
Query: 725 LIGEL 729
++GEL
Sbjct: 476 MVGEL 480
>gi|326924575|ref|XP_003208501.1| PREDICTED: glutamate receptor 3-like [Meleagris gallopavo]
Length = 893
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 287/579 (49%), Gaps = 59/579 (10%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F N + +AF AV+ N + L V H+++ +S C+ S G
Sbjct: 37 GLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRG 96
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKG- 123
+ AIFG + N + S C +F P+ PT+ V + KG
Sbjct: 97 VYAIFGFYDQMSMNTLTSFCGALHT----SFITPS---FPTDA--DVQFVIQMRPALKGA 147
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D ++R
Sbjct: 148 ILSLLTYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----DVQEFR 202
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAHTVD 240
+++E+ E L+DC +D+ TIL+Q V ++G + +Y+L+ + +
Sbjct: 203 RIIEEMDRRQEKRYLIDCEVDRINTILEQ---VVILGKHSRGYHYMLANLGF----TDIV 255
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYDA 299
+ G AN+T +++N NP ++ + W+ +E E + N +K +AL +DA
Sbjct: 256 LERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKN---SPLKYTSALTHDA 312
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A + L ++ + C NP+ W G+ I +K + + GMTG I D
Sbjct: 313 VLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFD 372
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRTLTV 410
+ GRR +++++ E + + G WN + R T++Q+ +ENRT+ V
Sbjct: 373 TY-GRRTNYTIDVYEMKASGSRKAGYWN-----EYERFVPTLDQLPSNDTSSVENRTIVV 426
Query: 411 TSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ PY+M KN E E Y GY VDL IA + YK + +
Sbjct: 427 TT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDG 477
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 478 KYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 537
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 538 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 576
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 691 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 750
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 751 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 795
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 626 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 685
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 686 TKEFFR 691
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 433 PYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 492
Query: 726 IGEL 729
+GEL
Sbjct: 493 VGEL 496
>gi|158260153|dbj|BAF82254.1| unnamed protein product [Homo sapiens]
Length = 906
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + VD
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDVD 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|301613930|ref|XP_002936446.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like [Xenopus
(Silurana) tropicalis]
Length = 995
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 274/548 (50%), Gaps = 57/548 (10%)
Query: 53 TAKLMCNATSEGIAAIFGPQ-SIENRNIIESMCQMFDIPHVEAFWD--PNKYFIPTNGVH 109
T MC +G+ ++ GP S + + + +C +IPH++ + P ++
Sbjct: 82 TTDTMCQILPKGVVSVLGPSTSPASASTVSHICGEKEIPHIKVGPEEAPKLQYLR---FA 138
Query: 110 GVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPS 169
V++YP + IS +S I+ + ++I + L+ L++++ ++ + +
Sbjct: 139 SVSLYPSNEDISLAVSHILKSFHNPSTSLICAKAECLLRLEELV-------RQFLISKDT 191
Query: 170 VTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSL 229
+++R L +++D PLLKEI++ S I++D + + ILK+A E+ + + YIL+
Sbjct: 192 LSVRMLD-ESNDPTPLLKEIRDDKVSTIIIDANATVSHLILKKASELGMTSAHYKYILTT 250
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVR 285
+ + + + +NI M N ++P +RS+ W E E L
Sbjct: 251 MDFPL----LSLEGIVSDQSNILGFSMYNSSHPFYLEFLRSLNMSW-RENCELSTYLGP- 304
Query: 286 AETVKIEAALMYDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITID 344
+ AALM+DAV++ +A++ L + + LSC WQHG + N ++ + D
Sbjct: 305 ----ALSAALMFDAVHVVVSAVRELNRSQEIGVKQLSCSTSQIWQHGTSLMNYLRMVEYD 360
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEK 402
G+TGR+ +S+ G+R +++L +E D + +G W N +N + +D E
Sbjct: 361 GLTGRVEFNSK-GQRTNYTLRILEKAGDGHREIGVWYSNRTLAMNAT----SLDLSTSET 415
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTY 456
+EN+TL VT+ PYMM+ L G + +++ +A L F Y
Sbjct: 416 LENKTLVVTT---------ILENPYMMRKSNYRSLSGNDQYEGFCAEMLMELAALLRFNY 466
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGI 516
K L + YG P G W G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGI
Sbjct: 467 KIKLVEDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGI 525
Query: 517 SILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSN 576
SILYR ++P FSFL+P S VW++M AYL VS +LF AR+S Y N +
Sbjct: 526 SILYRVQMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPH 580
Query: 577 VSLYQRMH 584
L +R H
Sbjct: 581 PCLRERHH 588
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 673 IHGGSTMTF-FQNSRYQTYQRMWNYMNSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 729
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY NC+L Q+GGLLD+KGYGI MP
Sbjct: 730 NEYHRRLNCNLTQIGGLLDTKGYGIGMP 757
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + GS
Sbjct: 618 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESADDLADQTNIEYGTIHGGS 677
Query: 815 TRNFFK 820
T FF+
Sbjct: 678 TMTFFQ 683
>gi|296932856|gb|ADH93572.1| glutamate receptor form D [Homo sapiens]
Length = 682
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 258/521 (49%), Gaps = 43/521 (8%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LY GY +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICD--LTITSERRAAV 505
G + G+WNG++ EL + ++ ++ D S RR +V
Sbjct: 489 GAQDDANGQWNGMVRELIDHKSKISTYDKMWAFMSSRRQSV 529
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L Q
Sbjct: 510 SKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNLTQ 567
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 568 IGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 608
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|395860249|ref|XP_003802426.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Otolemur garnettii]
Length = 682
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 258/521 (49%), Gaps = 43/521 (8%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LY GY +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICD--LTITSERRAAV 505
G + G+WNG++ EL + ++ ++ D S RR +V
Sbjct: 489 GAQDDANGQWNGMVRELIDHKSKISTYDKMWAFMSSRRQSV 529
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L Q
Sbjct: 510 SKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNLTQ 567
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 568 IGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 608
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGEL 729
++ EL
Sbjct: 501 MVREL 505
>gi|179442|gb|AAA58395.1| glutamate receptor type 1 [Homo sapiens]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDSIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|987864|emb|CAA61680.1| AMPA receptor GluR3/C [Gallus gallus]
Length = 888
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 288/583 (49%), Gaps = 59/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT+ V +
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFITPS---FPTDA--DVQFVIQMRPA 138
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
KG I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 139 LKGAILSLLTYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----DV 193
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINA 236
++R +++E+ E L+DC +D+ TIL+Q V ++G + +Y+L+ +
Sbjct: 194 QEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQ---VVILGKHSRGYHYMLANLGF---- 246
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAAL 295
+ + G AN+T +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 247 TDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKN---SPLKYTSAL 303
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DAV + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 304 THDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGN 363
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENR 406
I D+ GRR +++++ E + + G WN + R T++Q+ +ENR
Sbjct: 364 IQFDTY-GRRTNYTIDVYEMKASGSRKAGYWN-----EYERFVPTLDQLPSNDTSSVENR 417
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 418 TIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSI 468
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 469 VGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMI 528
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + Y+GVS++LF ++R S
Sbjct: 529 KKPQKSKPGVFSFLDPLAYEIWMCIVFGYIGVSVVLFLVSRFS 571
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|426229954|ref|XP_004009048.1| PREDICTED: glutamate receptor 1 isoform 1 [Ovis aries]
gi|302635696|gb|ADL60420.1| ionotropic glutamate receptor AMPA 1 [Bos taurus]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|414893|emb|CAA41491.1| glutamate receptor GLUR1 [Homo sapiens]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVAFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|224067647|ref|XP_002198407.1| PREDICTED: glutamate receptor 1 isoform 1 [Taeniopygia guttata]
Length = 902
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 281/575 (48%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +E++ E +++DC ++ IL + + G+ +YIL+ + +D
Sbjct: 184 GYRLLFQELEKKKERLVVVDCETERLNIILNKIISLEKNGNGYHYILANMGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W N+ V + K +AL YD V
Sbjct: 240 LTKFRESGANVTGFQLVNYTDTVPARIMQQW--RNNDAREHPRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A Q+L ++ C NP+ W G+ I ++ + +G++G + +
Sbjct: 298 RVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN L V+ + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKL-VPIAVDTQSGNESTSLQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 580 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 637
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG +E GST+ FF+
Sbjct: 638 LTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|426229956|ref|XP_004009049.1| PREDICTED: glutamate receptor 1 isoform 2 [Ovis aries]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|332254955|ref|XP_003276601.1| PREDICTED: glutamate receptor 1 isoform 1 [Nomascus leucogenys]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|291387682|ref|XP_002710371.1| PREDICTED: glutamate receptor, ionotropic, AMPA 1-like isoform 2
[Oryctolagus cuniculus]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|149726158|ref|XP_001503669.1| PREDICTED: glutamate receptor 1 isoform 2 [Equus caballus]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|167001484|ref|NP_001107655.1| glutamate receptor 1 isoform 2 precursor [Homo sapiens]
gi|397517655|ref|XP_003829023.1| PREDICTED: glutamate receptor 1 isoform 1 [Pan paniscus]
gi|119582055|gb|EAW61651.1| glutamate receptor, ionotropic, AMPA 1, isoform CRA_b [Homo
sapiens]
gi|307685589|dbj|BAJ20725.1| glutamate receptor, ionotropic, AMPA 1 [synthetic construct]
gi|410300098|gb|JAA28649.1| glutamate receptor, ionotropic, AMPA 1 [Pan troglodytes]
gi|410338207|gb|JAA38050.1| glutamate receptor, ionotropic, AMPA 1 [Pan troglodytes]
Length = 906
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|2828714|gb|AAC00192.1| glutamate receptor DGluRIIB [Drosophila melanogaster]
Length = 913
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 177/581 (30%), Positives = 277/581 (47%), Gaps = 47/581 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF A+ +N A+ P + L+ I ++V DS+ + C+
Sbjct: 25 IKIGAIFFDTEMKLADAFSAALEEVN----AINPALKLDAIKRYVTVDDSIVLQDISCDL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + N VNV P
Sbjct: 81 IGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSNRERMNHQLTVNVAPMELS 140
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L+ LQ +L I+ Q
Sbjct: 141 LSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIK--------MQEFE 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I N+ E +LLDC D V ++ + ++ G + + L+ L ++
Sbjct: 193 RGDDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGI 252
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF A VR+ P + ++ +++ + V + + L+
Sbjct: 253 DGFYSRDFTVAVA---AVRIRTYVPPPVHDEID--VFDNS-------VDTSFSSLGSQLV 300
Query: 297 YDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
YD++ LF AL + +R P SC WQ G + MK IT + T R+
Sbjct: 301 YDSIVLFYNALLEISQRPGFYIPNFSC-GRGFWQPGPRLVEQMKQITPKMVKPPFKTQRL 359
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
+++ G+R F+LE + D +V WN F L N ++ ++Q + KE
Sbjct: 360 QINAD-GQREDFNLEVYNPIID--RVTHIWNKEFQLVDFGKLRENSTQALKQKRLQNKED 416
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI M+A E F + F
Sbjct: 417 FSQKPIRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPV 476
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 477 RDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 536
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
K + D+++FL P + +VW+++ A + + L F RI
Sbjct: 537 KEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRI 577
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+E V+ V KG YAF ME+T ++Y V++NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEAVDPVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G LR+ +GE + ++N
Sbjct: 762 AVPLNADFRSNLSVGI--LRLSERGELFKLRN 791
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL+ WW F L++ +Y A LAAF+T++++ I ++ DL ++++G + G+T +
Sbjct: 627 RLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVY 686
Query: 819 F 819
F
Sbjct: 687 F 687
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI M+A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQL 498
>gi|183281|gb|AAA58613.1| glutamate receptor subunit [Homo sapiens]
Length = 907
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|403285585|ref|XP_003934101.1| PREDICTED: glutamate receptor 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 906
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 778
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|403285583|ref|XP_003934100.1| PREDICTED: glutamate receptor 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 906
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|296193304|ref|XP_002744463.1| PREDICTED: glutamate receptor 1 isoform 2 [Callithrix jacchus]
Length = 906
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|332254957|ref|XP_003276602.1| PREDICTED: glutamate receptor 1 isoform 2 [Nomascus leucogenys]
Length = 906
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|73953610|ref|XP_546286.2| PREDICTED: glutamate receptor 1 isoform 1 [Canis lupus familiaris]
gi|301776446|ref|XP_002923643.1| PREDICTED: glutamate receptor 1-like isoform 2 [Ailuropoda
melanoleuca]
gi|410949409|ref|XP_003981414.1| PREDICTED: glutamate receptor 1 isoform 1 [Felis catus]
Length = 906
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|224067649|ref|XP_002198429.1| PREDICTED: glutamate receptor 1 isoform 2 [Taeniopygia guttata]
Length = 902
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 281/575 (48%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +E++ E +++DC ++ IL + + G+ +YIL+ + +D
Sbjct: 184 GYRLLFQELEKKKERLVVVDCETERLNIILNKIISLEKNGNGYHYILANMGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W N+ V + K +AL YD V
Sbjct: 240 LTKFRESGANVTGFQLVNYTDTVPARIMQQW--RNNDAREHPRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A Q+L ++ C NP+ W G+ I ++ + +G++G + +
Sbjct: 298 RVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN L V+ + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKL-VPIAVDTQSGNESTSLQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 580 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 637
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG +E GST+ FF+
Sbjct: 638 LTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 778
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|73953608|ref|XP_853398.1| PREDICTED: glutamate receptor 1 isoform 2 [Canis lupus familiaris]
gi|301776444|ref|XP_002923642.1| PREDICTED: glutamate receptor 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|410949411|ref|XP_003981415.1| PREDICTED: glutamate receptor 1 isoform 2 [Felis catus]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|334311411|ref|XP_003339612.1| PREDICTED: glutamate receptor 1-like isoform 2 [Monodelphis
domestica]
Length = 902
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 285/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERKTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ DW F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYDWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +++ + +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLGKKKDRLVVVDCESERLNAILGQIIKMEKNGIGYHYILANLGF----MDMD 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ I+ W + N+ V + K +AL YD V
Sbjct: 240 LAKFKESGANVTGFQLVNYTDTIPAKILQQW--KNNDVRDHTRVDWKKPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL +++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 RVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ R+ K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRMRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|296193302|ref|XP_002744462.1| PREDICTED: glutamate receptor 1 isoform 1 [Callithrix jacchus]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 778
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|449267126|gb|EMC78092.1| Glutamate receptor 1 [Columba livia]
Length = 905
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 162/576 (28%), Positives = 283/576 (49%), Gaps = 49/576 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALINVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +E++ E +++DC ++ IL + ++ G+ +YIL+ + +D
Sbjct: 184 GYRVLFQELEKKKERLVVVDCETERLNIILSKIIKLEKNGNGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE-NERGRSLNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W + E R R + +AL YD
Sbjct: 240 LTKFKESGANVTGFQLVNYTDAVPARIMQQWRNNDAREHPRVDWKRPKASGYTSALTYDG 299
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A Q+L ++ C NP+ W G+ I ++ + +G++G + +
Sbjct: 300 VRVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFN 359
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN L + ++ + ++NRT VT+
Sbjct: 360 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPA-AIDTQSGNESTSLQNRTYIVTT- 416
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG
Sbjct: 417 --------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYG 468
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 469 ARDPDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 528
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 529 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 564
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
+Q + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 583 DQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 640
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG +E GST+ FF+
Sbjct: 641 LTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFR 677
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSAL 759
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + + Y+ + R+ YG +P T WNG
Sbjct: 420 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNG 479
Query: 725 LIGEL 729
++GEL
Sbjct: 480 MVGEL 484
>gi|122063501|sp|Q38PU8.1|GRIA1_MACFA RecName: Full=Glutamate receptor 1; Short=GluR-1; AltName:
Full=AMPA-selective glutamate receptor 1; AltName:
Full=GluR-A; AltName: Full=GluR-K1; AltName:
Full=Glutamate receptor ionotropic, AMPA 1; Short=GluA1;
Flags: Precursor
gi|76574770|gb|ABA47253.1| GluR1 [Macaca fascicularis]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|167001419|ref|NP_000818.2| glutamate receptor 1 isoform 1 precursor [Homo sapiens]
gi|388453103|ref|NP_001252714.1| glutamate receptor 1 precursor [Macaca mulatta]
gi|332822411|ref|XP_003310973.1| PREDICTED: glutamate receptor 1 isoform 1 [Pan troglodytes]
gi|397517657|ref|XP_003829024.1| PREDICTED: glutamate receptor 1 isoform 2 [Pan paniscus]
gi|116242505|sp|P42261.2|GRIA1_HUMAN RecName: Full=Glutamate receptor 1; Short=GluR-1; AltName:
Full=AMPA-selective glutamate receptor 1; AltName:
Full=GluR-A; AltName: Full=GluR-K1; AltName:
Full=Glutamate receptor ionotropic, AMPA 1; Short=GluA1;
Flags: Precursor
gi|84627519|gb|AAI11735.1| Glutamate receptor, ionotropic, AMPA 1 [Homo sapiens]
gi|119582053|gb|EAW61649.1| glutamate receptor, ionotropic, AMPA 1, isoform CRA_a [Homo
sapiens]
gi|119582054|gb|EAW61650.1| glutamate receptor, ionotropic, AMPA 1, isoform CRA_a [Homo
sapiens]
gi|261859002|dbj|BAI46023.1| glutamate receptor, ionotropic, AMPA 1 [synthetic construct]
gi|355691774|gb|EHH26959.1| hypothetical protein EGK_17050 [Macaca mulatta]
gi|355750350|gb|EHH54688.1| hypothetical protein EGM_15576 [Macaca fascicularis]
gi|387273253|gb|AFJ70121.1| glutamate receptor 1 isoform 1 precursor [Macaca mulatta]
gi|410300096|gb|JAA28648.1| glutamate receptor, ionotropic, AMPA 1 [Pan troglodytes]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|291387680|ref|XP_002710370.1| PREDICTED: glutamate receptor, ionotropic, AMPA 1-like isoform 1
[Oryctolagus cuniculus]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|149726156|ref|XP_001503668.1| PREDICTED: glutamate receptor 1 isoform 1 [Equus caballus]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|126291322|ref|XP_001379365.1| PREDICTED: glutamate receptor 1-like isoform 1 [Monodelphis
domestica]
Length = 902
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 285/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERKTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ DW F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYDWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +++ + +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLGKKKDRLVVVDCESERLNAILGQIIKMEKNGIGYHYILANLGF----MDMD 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ I+ W + N+ V + K +AL YD V
Sbjct: 240 LAKFKESGANVTGFQLVNYTDTIPAKILQQW--KNNDVRDHTRVDWKKPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL +++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 RVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ R+ K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRMRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|426350710|ref|XP_004042911.1| PREDICTED: glutamate receptor 1 isoform 1 [Gorilla gorilla gorilla]
Length = 906
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 283/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W + ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW--KSSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|402873161|ref|XP_003900454.1| PREDICTED: glutamate receptor 1 [Papio anubis]
Length = 955
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|195449687|ref|XP_002072180.1| GK22710 [Drosophila willistoni]
gi|194168265|gb|EDW83166.1| GK22710 [Drosophila willistoni]
Length = 894
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 275/565 (48%), Gaps = 49/565 (8%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E + F+ A+ N++ L + V D+ + +C GIA +F
Sbjct: 47 NTETMNIIFDHAINVANQEIGT-----SLSSLKAEVNYGDAYQSYGKLCRMLETGIAGVF 101
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + + S+C DIPH+ Y + G N++P ++K + +I
Sbjct: 102 GPSSHHSALHLMSICDAMDIPHI--------YSHMSELAEGFNLHPHPKDLAKALHSVIT 153
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+W F +YE+ D L L ++ P +T+ + D +Y+ +L+
Sbjct: 154 AFNWSRFIFLYESADYLNILNELT-------TLFGMNGPVITVLRYDMQLDGNYKQILRR 206
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ SS++ I++ S D L QA++V + + NYI+ + H+ D ++++
Sbjct: 207 VRKSSDNQIVVVGSSDTMPDFLNQAQQVGIFTEDYNYIIGNLDF----HSFDLEEYKYSE 262
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
ANIT R+ +P I+ ++ Y N++ N + +E AL YDAV LFA L+
Sbjct: 263 ANITAFRLFSPEKMAIKELLTKLGYS-NDQDEFRNGSC-PITVEMALTYDAVQLFAETLK 320
Query: 309 SLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFSLEF 366
+L KP+ S + S G N M+++ + +TG I + R + L+
Sbjct: 321 NL-PFKPVAQNCSQRSESVRDDGSSFKNYMRTLRLKDRLLTGPIFFEGNI--RKGYLLDV 377
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFAKLR 419
+E +GTW+ R T Q D + N+T L V +K +A+L
Sbjct: 378 IELQPSGIVKVGTWDEQREFRPQRLKPTNSQFDS-IDNSLANKTFIILLHVPNKPYAQLV 436
Query: 420 VLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
E Y K E Y GY +DLIK +A++L F Y FV N YG+ N T + G
Sbjct: 437 -----ESY--KQLEGNNQYEGYGIDLIKELADKLGFNYTFV-NGGNNYGSYNKSTNESTG 488
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ RADLA+ DLTITSER AVDFT+PFM LGI+ILY KP K QPDLF+F++P S
Sbjct: 489 MLREIMMGRADLAVTDLTITSEREEAVDFTIPFMNLGIAILYLKPQKAQPDLFTFMDPFS 548
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
DVW ++ ++L VSL F L R+S
Sbjct: 549 QDVWWFLGFSFLFVSLSFFILGRLS 573
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
YQ+M+ M + P + + N+EGV RV K KYAF MEST IEY ++ C+L ++G L
Sbjct: 691 YQKMNKFMMEN-PDLLTEDNEEGVRRV-KHSQKYAFLMESTSIEYNTKRECNLRKIGDAL 748
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + FA + + QG MKN
Sbjct: 749 DEKGYGIAM-RKNWPYRDKLNFAVIELQEQGVLEKMKN 785
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR V WWFFTLI++SSYTANLAAFLT I +V+DL K G + YG
Sbjct: 617 KALSTRTVGTFWWFFTLIVVSSYTANLAAFLTIENPQSLIDSVDDLVDNKDG-VVYGAKR 675
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 676 TGSTRNFF 683
>gi|410914066|ref|XP_003970509.1| PREDICTED: glutamate receptor 3-like [Takifugu rubripes]
Length = 882
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 167/579 (28%), Positives = 277/579 (47%), Gaps = 52/579 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 24 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C V + PT+ + L
Sbjct: 84 FSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSY-------PTDNEVQFVIQMRPALR 136
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W F +Y+T LQ ++E A ++ + VT R + TD
Sbjct: 137 GAVLS-LLSHYKWQKFVYLYDTDRGFSILQAIMEAAVANNWQ-------VTARSVSSTTD 188
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
++R +++E+ E ++DC +D+ TI +Q + +YIL+ +
Sbjct: 189 AAEFRRIIEEMDRRQEKRYVIDCEVDRINTIFEQVVTLGKNSRGYHYILANLGF----RN 244
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANI+ +++NP NP ++ M W E + R +K +AL +D
Sbjct: 245 VSLDKVFAGGANISGFQIVNPENPIVQQFMQRW--ERLDEREFPEARNAPLKYTSALTHD 302
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K++ + GMTG I
Sbjct: 303 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKTVQVQGMTGNIQF 362
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE--KKEKIENRTLTV 410
D+ GRR +++++ E + +G WN G V MD + +ENRT+ V
Sbjct: 363 DNY-GRRTNYTIDIYEMKIGGPRKIGHWNEYTGF-----VNIMDSQLSNDSSVENRTIVV 416
Query: 411 TSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 417 TTIMEA---------PYVMYKKNYMHLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVMDG 467
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 468 KYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 527
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 566
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 680 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 739
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P S L + + A L++ QG +KN
Sbjct: 740 TMKVGGNLDSKGYGVATPKSSAL-RNAVNLAVLKLNEQGLLDKLKN 784
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 614 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 673
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 674 STKEFFR 680
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 442 GYCVDLASEIAKHVGIKYKLSIVMDGKYGARDPETKTWNGMVGEL 486
>gi|380793103|gb|AFE68427.1| glutamate receptor 1 isoform 1 precursor, partial [Macaca mulatta]
Length = 794
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|344265180|ref|XP_003404664.1| PREDICTED: glutamate receptor 1-like isoform 2 [Loxodonta africana]
Length = 906
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 282/576 (48%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQRRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|348575143|ref|XP_003473349.1| PREDICTED: glutamate receptor 1-like [Cavia porcellus]
Length = 861
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 283/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W + ++ V + K +AL YD V
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTVPAKIMQQW--KTSDARDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 727 GELQEQVDTFILFFIYSILFF-IYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTA 778
G Q D F I++ L+F + F+ + ++S R+V G+WWFFTLI+ISSYTA
Sbjct: 573 GRDQTTTDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTA 632
Query: 779 NLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
NLAAFLT RM PI++ EDLAK I YG +E GST+ FF+
Sbjct: 633 NLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 778
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|297477439|ref|XP_002689364.1| PREDICTED: glutamate receptor 1 isoform 1 [Bos taurus]
gi|296485134|tpg|DAA27249.1| TPA: glutamate receptor, ionotropic, AMPA 1 isoform 1 [Bos taurus]
Length = 906
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A Q+L ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|351699004|gb|EHB01923.1| Glutamate receptor 1 [Heterocephalus glaber]
Length = 906
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +Y+L+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYMLANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKVGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|297477441|ref|XP_002689365.1| PREDICTED: glutamate receptor 1 isoform 2 [Bos taurus]
gi|296485135|tpg|DAA27250.1| TPA: glutamate receptor, ionotropic, AMPA 1 isoform 2 [Bos taurus]
gi|302635698|gb|ADL60421.1| ionotropic glutamate receptor AMPA 1 [Bos taurus]
Length = 906
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 283/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A Q+L ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|344265178|ref|XP_003404663.1| PREDICTED: glutamate receptor 1-like isoform 1 [Loxodonta africana]
Length = 906
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 282/576 (48%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQRRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDA 299
F+ AN+T +++N T+ IM W +N R V + K +AL YD
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 297 VKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 --------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 778
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|226568|prf||1602240A Glu receptor
Length = 907
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 283/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V D+ C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDTFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ N+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGRNVTGFQLVNYTDTIPARIMQQW--RTSDSRDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 778
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|202868|gb|AAA63479.1| AMPA selective glutamate receptor, partial [Rattus norvegicus]
Length = 907
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 283/575 (49%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V D+ C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDTFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ N+T +++N T+ IM W ++ V + K +AL YD V
Sbjct: 240 LNKFKESGRNVTGFQLVNYTDTIPARIMQQW--RTSDSRDHTRVDWKRPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 414 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV + +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVLTTEEGMIRVRKTKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL 756
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 417 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 476
Query: 725 LIGEL 729
++GEL
Sbjct: 477 MVGEL 481
>gi|61675663|gb|AAX51647.1| RE24732p [Drosophila melanogaster]
Length = 902
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 277/570 (48%), Gaps = 60/570 (10%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N + P+V E +S+ +C G+ A+
Sbjct: 45 DRIRQTFEHAISVVNNELGV--------PLVGETEQVAYGNSVQAFAQLCRLMQSGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISV 126
FGP + + + + C DIP + W N G N++P I+ +
Sbjct: 97 FGPAARHTASHLLNACDSKDIPFIYPHLSWGSNP--------DGFNLHPSPEDIANALYD 148
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYR 183
I+N +W F YE+ + L L ++ R G I+ + D + +Y+
Sbjct: 149 IVNQFEWSRFIFCYESAEYLKILDHLM---------TRYGIKGPVIKVMRYDLNLNGNYK 199
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
+L+ I+ S +S I++ S +L+QA++V +M + YI+ +N HT D ++
Sbjct: 200 SVLRRIRKSEDSRIVVVGSTTGVAELLRQAQQVGIMNEDYTYIIGN----LNLHTFDLEE 255
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
++ ANIT +RM +P +R +M E +N + + +E AL YDAV +
Sbjct: 256 YKYSEANITGIRMFSPDQEEVRDLMESCTKNWGE-SEPVNSGSTFITMEMALTYDAVRVI 314
Query: 304 AAALQSLGERKPLPTPLSC--ENPSSWQHGLGIGNLMKSITID--GMTGRINLDSQTGRR 359
A + L + P L+C + + G N M+S+ I +TGRI + R
Sbjct: 315 AETTKHLPYQ---PQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNV--R 369
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F+ + +E + +GTW R + ++ I++ +L +KTF L
Sbjct: 370 KGFTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFND---IDDGSLV--NKTFIVL- 423
Query: 420 VLFQGEPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+ +PY ++++ +T + GY VDLIK +A++L F + F + N YG+ N T
Sbjct: 424 ISVATKPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTF-RDGGNDYGSFNKTT 482
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+G++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF
Sbjct: 483 NSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSF 542
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW+Y+ AYLGVSL F + R+S
Sbjct: 543 MDPFSSEVWLYLGIAYLGVSLCFFIIGRLS 572
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA-KAGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT PI +V+DLA ++YG
Sbjct: 616 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRT 675
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 676 GSTRNFF 682
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ + ++ P + +++N++GV++V K KYAF M
Sbjct: 668 VQYGAKRTGSTRNFFSTSEEPIYIKMNEYL-NAHPEMLMENNQQGVDKV-KSGTKYAFLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDPLDEKGYGIAM-VKNWPYRDKFNKALLELQEQGVLARLKN 784
>gi|194856774|ref|XP_001968823.1| GG25085 [Drosophila erecta]
gi|190660690|gb|EDV57882.1| GG25085 [Drosophila erecta]
Length = 913
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 175/581 (30%), Positives = 274/581 (47%), Gaps = 47/581 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF +A+ +N A+ P + LE I ++V DS+ + C+
Sbjct: 25 VKIGAIFFDTEIKLADAFSVALEEVN----AVNPTLKLEAIKRYVTVDDSIVLQDISCDL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W + N VNV P
Sbjct: 81 IGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHAQQSARERMNHQLTVNVAPMELF 140
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L+ LQ +L I+ Q
Sbjct: 141 LSAAFSDILASKSFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIK--------MQEFD 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I ++ E +LLDC D V ++ + ++ G + + L+ L ++
Sbjct: 193 RGDDYRILWKRINDAREKFVLLDCPSDILVDVINASIRYNMTGSFNHLFLTNLDTHLSGI 252
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF ++ VR+ P + ++ + + R SL + L+
Sbjct: 253 DQFYSRDFT---LSVAAVRIRTYVPPPVHDEIDVFDNSVDTRFSSLG---------SQLL 300
Query: 297 YDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
YD V LF AL + + P SC WQ G + MK I+ T R+
Sbjct: 301 YDCVVLFYNALLEISQVSGFHIPNFSC-GRGFWQPGPRLVEQMKQISPKMAKPPFKTQRL 359
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
+++ G+R F+LE + D +V WN F L N ++ ++Q + KE
Sbjct: 360 QINAD-GQREDFNLEVYNPIID--RVTHIWNKEFQLVDFEKLRENSTQAIKQKRLQNKED 416
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI ++A E F + F
Sbjct: 417 FSQKPIKYTVATRVGKPYFSWREEPEGVHFEGNERFEGYAVDLIYLLAQECKFDFNFEPV 476
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 477 RDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 536
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
K + D+++FL P + +VW+++ A + + L F RI
Sbjct: 537 KEPPPKTDIYAFLNPYNAEVWLFVMIAMMITAFALIFAGRI 577
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV KG YAF ME+T ++Y VE+NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVERNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G LR+ +GE + ++N
Sbjct: 762 AVPLNADFRSNLSVGI--LRLSERGELFKLRN 791
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 727 GELQEQ----VDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAA 782
GEL+ Q + + + SIL + V RL+ +WW F L++ +Y A LAA
Sbjct: 591 GELERQNIWHLSNTLWLVLGSILTQGCDLLPRGVPMRLLTALWWIFALLVSQTYVAKLAA 650
Query: 783 FLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
F+T++++ I ++ DL ++++G + G+T +F
Sbjct: 651 FITSSKIAGVIGSLHDLVDQNKVQFGTIRGGATSVYF 687
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI ++A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYLLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQL 498
>gi|221040654|dbj|BAH12004.1| unnamed protein product [Homo sapiens]
Length = 916
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+V G LDSKGYGIA P L + A L++ QG +KN
Sbjct: 744 TMKVEGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 788
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|332254959|ref|XP_003276603.1| PREDICTED: glutamate receptor 1 isoform 3 [Nomascus leucogenys]
Length = 916
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL 766
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|410039920|ref|XP_003310974.2| PREDICTED: glutamate receptor 1 isoform 2 [Pan troglodytes]
Length = 916
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 788
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|397517659|ref|XP_003829025.1| PREDICTED: glutamate receptor 1 isoform 3 [Pan paniscus]
Length = 916
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL 766
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|195569401|ref|XP_002102698.1| GD20047 [Drosophila simulans]
gi|194198625|gb|EDX12201.1| GD20047 [Drosophila simulans]
Length = 897
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 283/570 (49%), Gaps = 59/570 (10%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + + V D+ + +C GIA +F
Sbjct: 48 NTEQMNIVFDHAIDVANQEVGT-----SLTSLKEEVNYGDAYQSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G N++P ++K + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYMSEN--------AEGFNLHPHPADLAKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLL 186
+ +W F +YE+ + L L ++ + G+ I L D +Y+ +L
Sbjct: 155 EFNWTRFIFLYESAEYLNILNEL---------TMMLGKSGTVITVLRYDMQLNGNYKQVL 205
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKY 261
Query: 247 GYANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLF 303
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LF
Sbjct: 262 SEANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLF 316
Query: 304 AAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNS 361
A L++L KP+P S S G N M+++ + +TG I + R
Sbjct: 317 AQTLKNL-PFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNV--RKG 373
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKT 414
+ L+ +E +GTW+ R T Q D + N+T L+V +K
Sbjct: 374 YHLDVIELQPSGIVKVGTWDEDRQYRPQRLAPTTAQFDS-VDNSLANKTFIILLSVPNKP 432
Query: 415 FAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+A+L E Y K E Y GY VDLIK +A++L F + FV N YG+ N T
Sbjct: 433 YAQLV-----ETY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKST 484
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+ G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K +P+LF+F
Sbjct: 485 NESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKAKPELFTF 544
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW ++ ++LGVSL F L R+S
Sbjct: 545 MDPFSEEVWWFLGFSFLGVSLSFFILGRLS 574
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT I +V+DLA K G + YG +
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIENPQSLINSVDDLADNKDG-VVYGAKK 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M S P + N EGV RV K YAF MEST IEY +++ C+L ++G L
Sbjct: 692 YKKMNKFM-SENPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNIKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKDWPHRGKFNNALLELQEQGVLEKMKN 786
>gi|195498263|ref|XP_002096448.1| GE25052 [Drosophila yakuba]
gi|194182549|gb|EDW96160.1| GE25052 [Drosophila yakuba]
Length = 896
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 282/570 (49%), Gaps = 59/570 (10%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + + V D+ + +C GIA +F
Sbjct: 48 NTEQMNIVFDHAIDVANQEVGT-----TLTALKEEVNYGDAYQSYGRLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G N++P ++K + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYMSEN--------AEGFNLHPHPSDLAKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLL 186
+ +W F +YE+ + L L ++ G+ I L D +Y+ +L
Sbjct: 155 EFNWTRFIFLYESAEYLNILNEL---------TTMLGKSGTVITVLRYDMQLNGNYKQVL 205
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKY 261
Query: 247 GYANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLF 303
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LF
Sbjct: 262 SEANITGLRLFSPEKMAVKELLIKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLF 316
Query: 304 AAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNS 361
A L++L KP+P S S G N M+++ + +TG I + R
Sbjct: 317 AQTLKNL-PFKPVPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNV--RKG 373
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKT 414
+ L+ +E +GTW+ R T Q D + N+T L+V +K
Sbjct: 374 YHLDIIELQPSGIVKVGTWDEERQYRPQRLAPTTAQFDS-VDNSLANKTFIILLSVPNKP 432
Query: 415 FAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+A+L E Y K E Y GY VDLIK +A++L F + FV N YG+ N T
Sbjct: 433 YAQLV-----ETY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKST 484
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+ G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K +P+LF+F
Sbjct: 485 NESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKAKPELFTF 544
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW ++ ++LGVSL F L R+S
Sbjct: 545 MDPFSEEVWWFLGFSFLGVSLSFFILGRLS 574
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +V+DLA K G + YG +
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKK 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M S P + N EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 692 YKKMNKFM-SDNPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNTKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKDWPHRGKFNNALLELQEQGVLEKMKN 786
>gi|441596054|ref|XP_004087285.1| PREDICTED: glutamate receptor 1 [Nomascus leucogenys]
Length = 916
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 788
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|384381490|ref|NP_001244951.1| glutamate receptor 1 isoform 6 [Homo sapiens]
gi|221045256|dbj|BAH14305.1| unnamed protein product [Homo sapiens]
Length = 916
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL 766
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|163915001|ref|NP_001106494.1| glutamate receptor, ionotropic, AMPA 3 precursor [Xenopus
(Silurana) tropicalis]
gi|159155177|gb|AAI54692.1| LOC100127683 protein [Xenopus (Silurana) tropicalis]
Length = 887
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 287/582 (49%), Gaps = 57/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 INIGGLFMRNTIQEHSAFLFAVQLHNTNQNNTERPFQLFHHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C + + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFITPSFPTDADVQFV-------IQMRPP-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++N+ DW F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILTLLNEYDWQKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDY-QNYILSLTSYWINAH 237
+++ +++E+ E ++DC +++ TIL+Q V ++G + + Y L +
Sbjct: 193 VQEFKRIIEEMDRRQEKRFVIDCEVERINTILEQ---VVILGKHTRGYHYMLANLGFTGF 249
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALM 296
T+ + G AN+T +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 250 TL--ERVMHGGANVTGFQIVNNENPIVQQFLQRWVRLDEREFPEARNT---PLKYTSALT 304
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DAV + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 305 HDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 364
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR +++++ E + + + +G WN + R V D++ + +EN+T
Sbjct: 365 QFDTY-GRRTNYTIDVYEMTATKPRKVGHWN-----EYERFVPAPDQQPTNESSSVENKT 418
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+MK + GY VDL IA + YK +
Sbjct: 419 IIVTT---------ILENPYVMKKKNHELLDGNDKYEGYCVDLASEIAKHVGIKYKLSIV 469
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 470 EDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIK 529
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 685 RRSKIAVYEKMWSYMKSAEPSVFTKTTDDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 789
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+MK + GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMKKKNHELLDGNDKYEGYCVDLASEIAKHVGIKYKLSIVEDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|384381488|ref|NP_001244950.1| glutamate receptor 1 isoform 5 [Homo sapiens]
Length = 916
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 788
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|397517661|ref|XP_003829026.1| PREDICTED: glutamate receptor 1 isoform 4 [Pan paniscus]
Length = 916
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 282/575 (49%), Gaps = 52/575 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGV 307
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 308 KVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 366
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT-- 423
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 -------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 476
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 477 RDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 536
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 788
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|426350712|ref|XP_004042912.1| PREDICTED: glutamate receptor 1 isoform 2 [Gorilla gorilla gorilla]
Length = 916
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 282/574 (49%), Gaps = 50/574 (8%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 36 EVWGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQF 88
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLIS 121
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 89 SKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQ 140
Query: 122 KGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD 181
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 141 DALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEG 194
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 195 YRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDL 250
Query: 242 QDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVY 301
F+ AN+T +++N T+ IM W + ++ V + K +AL YD V
Sbjct: 251 NKFKESGANVTGFQLVNYTDTIPAKIMQQW--KSSDARDHTRVDWKRPKYTSALTYDGVK 308
Query: 302 LFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + + +
Sbjct: 309 VMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-E 367
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 368 KGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT--- 423
Query: 416 AKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 424 ------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGAR 477
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 478 DPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 537
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 538 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 619 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 678
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 679 TKEFFR 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 684 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 788
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 427 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|395860247|ref|XP_003802425.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Otolemur garnettii]
Length = 688
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 252/506 (49%), Gaps = 45/506 (8%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--TI 172
P+ +S+ I ++ W T T++Y+ L+ LQ++++ P R ++ I
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIK---------APSRYNLRLKI 201
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
RQLP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI +
Sbjct: 202 RQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT--- 258
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVK 290
++ +D + ++ N+T R++N N + SI+ W E + + + +
Sbjct: 259 -LDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMT 317
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
+AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 318 TDAALMYDAVHVVSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRI 375
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L V
Sbjct: 376 TFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIV 435
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLEREN 464
T+ EPY++ LY GY +DL++ ++ L FTY+ L +
Sbjct: 436 TT---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDG 486
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADL 490
YG + G+WNG++ EL + ++ L
Sbjct: 487 KYGAQDDANGQWNGMVRELIDHKSVL 512
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Query: 593 SVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPT-S 651
SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L Q+GGL+DSKGYG+ P S
Sbjct: 510 SVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGS 567
Query: 652 KFLAKFSFGFAKLRVLFQGEPYMMK 676
+ K + +L+ +G+ +MMK
Sbjct: 568 PYRDKITIAILQLQE--EGKLHMMK 590
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGELQEQVDTFILF---FIYSILFFIYTFVNEAVSTRLV 761
++ EL + + I +L Y F+ E+ + V
Sbjct: 501 MVRELIDHKSVLVKSNEEGIQRVLTSDYAFLMESTTIEFV 540
>gi|296932858|gb|ADH93573.1| glutamate receptor form E [Homo sapiens]
Length = 687
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 251/504 (49%), Gaps = 41/504 (8%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P+ +S+ I ++ W T T++Y+ L+ LQ++++ + ++ IRQ
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLK-------IRQ 203
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
LP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI + +
Sbjct: 204 LPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT----L 259
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETVKIE 292
+ +D + ++ N+T R++N N + SI+ W E + + + + +
Sbjct: 260 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 293 AALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 320 AALMYDAVHVVSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT+
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTT 437
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTY 466
EPY++ LY GY +DL++ ++ L FTY+ L + Y
Sbjct: 438 ---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY 488
Query: 467 GTLNPQTGKWNGLIGELQEQRADL 490
G + G+WNG++ EL + ++ L
Sbjct: 489 GAQDDANGQWNGMVRELIDHKSVL 512
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Query: 593 SVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPT-S 651
SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L Q+GGL+DSKGYG+ P S
Sbjct: 510 SVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGS 567
Query: 652 KFLAKFSFGFAKLRVLFQGEPYMMK 676
+ K + +L+ +G+ +MMK
Sbjct: 568 PYRDKITIAILQLQE--EGKLHMMK 590
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 441 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 500
Query: 725 LIGELQEQVDTFILF---FIYSILFFIYTFVNEAVSTRLV 761
++ EL + + I +L Y F+ E+ + V
Sbjct: 501 MVRELIDHKSVLVKSNEEGIQRVLTSDYAFLMESTTIEFV 540
>gi|54261745|ref|NP_938174.1| glutamate receptor, ionotrophic, AMPA 3 precursor [Danio rerio]
gi|33327162|gb|AAQ08959.1| AMPA receptor subunit GluR3B [Danio rerio]
Length = 883
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 170/581 (29%), Positives = 283/581 (48%), Gaps = 55/581 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 24 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNMTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C V Y I ++ + + P +
Sbjct: 84 FSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTP-----SYPIDSDVQFVIQMRPP---L 135
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ WD F +Y+T LQ ++E A ++ + VT R + TD
Sbjct: 136 KGAVLSLLSHYKWDKFVYLYDTDRGFSILQAIMEAAVANNWQ-------VTARSVGSITD 188
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
++R +++E+ E L+DC +D+ IL+Q + +YI++ +
Sbjct: 189 PQEFRRIIEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYIIANLGF----TN 244
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAALMY 297
+ G ANI+ ++INP N ++ + W +E E + N +K +AL Y
Sbjct: 245 ISLDKVFLGGANISGFQIINPENLVVQQFLQRWDRLDEREFPEAKNT---PLKYTSALSY 301
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 302 DAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQ 361
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRTL 408
DS GRR +++++ E + + +G WN R V MD++ +ENRT+
Sbjct: 362 FDS-FGRRTNYTIDVYEMKTGGPRKIGYWN-----EFERFVNIMDQQFTNDSSSVENRTI 415
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLER 462
VT+ A PY+M KN E E Y GY VDL IA + Y+ +
Sbjct: 416 VVTTIMEA---------PYVMYKKNHMHLEGNEKYEGYCVDLASEIAKHVGIKYRLSIVM 466
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 467 DGKYGARDPETKSWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 526
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 567
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 615 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 674
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 675 STKEFFR 681
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + Y+ + + YG +P+T WNG+
Sbjct: 424 PYVMYKKNHMHLEGNEKYEGYCVDLASEIAKHVGIKYRLSIVMDGKYGARDPETKSWNGM 483
Query: 726 IGEL 729
+GEL
Sbjct: 484 VGEL 487
>gi|301624488|ref|XP_002941535.1| PREDICTED: glutamate receptor 1 isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 902
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/578 (28%), Positives = 288/578 (49%), Gaps = 56/578 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++++ PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLSE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYDRKTVNMLTSFCGALHV----CFITPS-FPVATSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEYYKWKKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAK--EVHLMGDYQNYILSLTSYWINAHT 238
YR L +++ S + I++DC ++ IL Q E +++G +YIL+ +
Sbjct: 184 GYRLLFQDLDKSKDRQIVIDCESERLNAILTQVVKLEKNIIG--YHYILANLGF----MD 237
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMY 297
+D Q F+ AN+T +++N T+ + IM W Y+ E+ R V + K +AL Y
Sbjct: 238 IDMQKFKEAGANVTGFQLVNYTDTMVSRIMQQWKNYDGREQPR---VDWKKPKYTSALTY 294
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL +++ C NP+ W G+ I ++ + ++G++G +
Sbjct: 295 DGVRVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRLEGLSGNVQ 354
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E + + + WN L T Q + ++NRT VT
Sbjct: 355 FN-EKGRRTNYTLHVLELKHEGIRHIAHWNEDDKLIPLATDAQAGNDTI-GVQNRTYIVT 412
Query: 412 SKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENT 465
+ A PY+M KN + E GY V+L IA + F YK + ++
Sbjct: 413 TILEA---------PYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGK 463
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + WNG++GEL RADLA+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 464 YGARDSDMKAWNGMVGELVYGRADLAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 523
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 524 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
K S ++++++M + M S+ PSVFVK+ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 KRSKIAVFEKMWTYMRSAEPSVFVKTTEEGMNRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + + A L++ QG
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSPL-RGAVNLAVLKLSEQG 771
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 8/102 (7%)
Query: 727 GELQEQVDTFILFFIYSILFF-IYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTA 778
G+ Q D F I++ L+F + F+ + ++S R+V G+WWFFTLI+ISSYTA
Sbjct: 573 GKEQPTTDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTA 632
Query: 779 NLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
NLAAFLT RM PI++ +DLAK I YG ++ GST+ FFK
Sbjct: 633 NLAAFLTVERMVSPIESADDLAKQTEIAYGTLDSGSTKEFFK 674
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E GY V+L IA + F YK + ++ YG + WNG+
Sbjct: 418 PYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGKYGARDSDMKAWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|301624490|ref|XP_002941536.1| PREDICTED: glutamate receptor 1 isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 902
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 285/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++++ PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLSE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYDRKTVNMLTSFCGALHV----CFITPS-FPVATSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEYYKWKKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +++ S + I++DC ++ IL Q ++ +YIL+ + +D
Sbjct: 184 GYRLLFQDLDKSKDRQIVIDCESERLNAILTQVVKLEKNIIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYDA 299
Q F+ AN+T +++N T+ + IM W Y+ E+ R V + K +AL YD
Sbjct: 240 MQKFKEAGANVTGFQLVNYTDTMVSRIMQQWKNYDGREQPR---VDWKKPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL +++ C NP+ W G+ I ++ + ++G++G + +
Sbjct: 297 VRVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRLEGLSGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E + + + WN L T Q + ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVLELKHEGIRHIAHWNEDDKLIPLATDAQAGNDTI-GVQNRTYIVTTI 414
Query: 414 TFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYG 467
A PY+M KN + E GY V+L IA + F YK + ++ YG
Sbjct: 415 LEA---------PYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ WNG++GEL RADLA+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDSDMKAWNGMVGELVYGRADLAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
K S ++++++M + M S+ PSVFVK+ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 KRSKIAVFEKMWTYMRSAEPSVFVKTTEEGMNRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 734 TMKVGGNLDSKGYGIATP 751
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 8/102 (7%)
Query: 727 GELQEQVDTFILFFIYSILFF-IYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTA 778
G+ Q D F I++ L+F + F+ + ++S R+V G+WWFFTLI+ISSYTA
Sbjct: 573 GKEQPTTDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTA 632
Query: 779 NLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
NLAAFLT RM PI++ +DLAK I YG ++ GST+ FFK
Sbjct: 633 NLAAFLTVERMVSPIESADDLAKQTEIAYGTLDSGSTKEFFK 674
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E GY V+L IA + F YK + ++ YG + WNG+
Sbjct: 418 PYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGKYGARDSDMKAWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|345478907|ref|XP_001600998.2| PREDICTED: glutamate receptor 1-like, partial [Nasonia vitripennis]
Length = 917
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 300/604 (49%), Gaps = 79/604 (13%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF +EV +AF AV N++ +I + + + D+ ++L+C+ + G
Sbjct: 1 AIFEQGTDEVQSAFRYAVGLHNQNTTGRKFEI--QAGIDIINTADAFKLSRLICDRFAIG 58
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G + ++ +I+ S F +P V W P K P++G+ +++ P+ H
Sbjct: 59 VYSLIGAVNPDSFDILHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---H 114
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR-----QLPP 177
I + W +Y++HD L+ LQQ+ + ++PG + + Q
Sbjct: 115 AIIDTVRHYGWKKIIYLYDSHDGLLRLQQIYQG-------LKPGNDTFQVETVKRIQNVS 167
Query: 178 DTDDYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
+ D+ L+EI S +++LDC M K + ++ ++V L +Y+LS +
Sbjct: 168 EALDFLRSLEEISRWSNKYVVLDCPTEMAKDI-VVNHVRDVTLGRRTYHYLLSGLIMDDR 226
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
W + ++F G NIT R+++ + H++S + GW + + + +++ +
Sbjct: 227 W-ESEVIEF-----GAINITGFRIVDGSRRHVKSFLEGW--SQLQTSQYPGAGRDSISAQ 278
Query: 293 AALMYDAVYLFAAALQ-----------------SLGERKPLPTPLSCENP----SSWQHG 331
AALMYDAV++ L + G + + L C++ S W G
Sbjct: 279 AALMYDAVFVLVDGLNKYVRKKTDKKNDRRTGGTSGGAQQVNATLDCKSNHGWVSHWDQG 338
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSR 390
I L++ + +G+TG+I + + GRR +++L+ VE + V + W G
Sbjct: 339 EKIARLLRKVETEGLTGQIKFNDE-GRRQNYTLDVVEMTVNSAPVKVAEWRDISGYQVVP 397
Query: 391 TVEQMDKEKKEKI-ENRTLTVTSKTFAKLRVLFQGEPYMMK----NPETGE-----LYGY 440
T + D+ K +I +N+T VT+ EPY+M+ N + E GY
Sbjct: 398 T--KRDRHPKSEILKNKTYIVTT---------IVEEPYIMERRFDNGKPAEKMKDRYEGY 446
Query: 441 SVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITS 499
DL +I +LN ++ + ++ YG+ NP+ G W+G++GEL + AD+AI +TITS
Sbjct: 447 CRDLADLITKKLNISWDLQIVKDGKYGSENPRVPGGWDGMVGELIRKEADIAIAPMTITS 506
Query: 500 ERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFL 559
ER +DF+ PFM+LGISI+ +KP K+ P +FSFL PLS ++WV + +Y+GVS++LF +
Sbjct: 507 ERERVIDFSKPFMSLGISIMIKKPVKQNPGVFSFLNPLSKEIWVCVIFSYIGVSIVLFIV 566
Query: 560 ARIS 563
+R S
Sbjct: 567 SRFS 570
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA + YG ++ G
Sbjct: 638 RSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVTPINSPEDLAAQTEVHYGTLQHG 697
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 698 STWDFFR 704
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S + LY++M M ++ VFV S EG++RV KGKYA +ES +Y E+ CD
Sbjct: 704 RRSQIELYKQMWRFMNENK-QVFVNSYDEGIQRVRTSKGKYALLIESPKNDYINEREPCD 762
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VG LD+KG+GIA P L + S A L + GE + N
Sbjct: 763 TMKVGRNLDAKGFGIATPLGSPL-RDSINLAVLSLKESGELAKLMN 807
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 671 EPYMMK----NPETGE-----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-G 720
EPY+M+ N + E GY DL +I +LN ++ + ++ YG+ NP+ G
Sbjct: 422 EPYIMERRFDNGKPAEKMKDRYEGYCRDLADLITKKLNISWDLQIVKDGKYGSENPRVPG 481
Query: 721 KWNGLIGEL 729
W+G++GEL
Sbjct: 482 GWDGMVGEL 490
>gi|195353929|ref|XP_002043454.1| GM23174 [Drosophila sechellia]
gi|194127595|gb|EDW49638.1| GM23174 [Drosophila sechellia]
Length = 897
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 282/570 (49%), Gaps = 59/570 (10%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + + V D+ + +C GIA +F
Sbjct: 48 NTEKMNIVFDHAIDVANQEVGT-----SLTSLKEEVNYGDAYQSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G N++P ++K + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYMSEN--------AEGFNLHPHPADLAKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLL 186
+ +W F +YE+ + L L ++ + G+ I L D +Y+ +L
Sbjct: 155 EFNWTRFIFLYESAEYLNILNEL---------TMMLGKSGTVITVLRYDMQLNGNYKQVL 205
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKY 261
Query: 247 GYANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLF 303
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LF
Sbjct: 262 SEANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLF 316
Query: 304 AAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNS 361
A L++L KP+P S S G N M+++ + +TG I + R
Sbjct: 317 AQTLKNL-PFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLSDRLLTGPIYFEGNV--RKG 373
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKT 414
+ L+ +E +GTW+ R T Q D + N+T L+V +K
Sbjct: 374 YHLDVIELQPSGIVKVGTWDEDRQYRPQRLAPTTAQFDS-VDNSLANKTFIILLSVPNKP 432
Query: 415 FAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+A+L E Y K E Y GY VDLIK +A++L F + FV N YG+ N T
Sbjct: 433 YAQLV-----ETY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKST 484
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+ G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F
Sbjct: 485 NESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTF 544
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW ++ ++LGVSL F L R+S
Sbjct: 545 MDPFSEEVWWFLGFSFLGVSLSFFILGRLS 574
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +V+DLA K G + YG +
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKK 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M S P + N EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 692 YKKMNKFM-SENPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNTKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKDWPHRGKFNNALLELQEQGVLEKMKN 786
>gi|54650666|gb|AAV36912.1| RE07945p [Drosophila melanogaster]
Length = 897
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 282/570 (49%), Gaps = 59/570 (10%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + + V D+ + +C GIA +F
Sbjct: 48 NTEQMNIVFDHAIDVANQEVGT-----SLTSLKEEVNYGDAYQSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G+N++P ++K + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYMSEN--------AEGLNLHPHPADLAKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLL 186
+ +W F +YE+ + L L ++ G+ I L D +Y+ +L
Sbjct: 155 EFNWTRFIFLYESAEYLNILNEL---------TTMLGKSGTVITVLRYDMQLNGNYKQVL 205
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKY 261
Query: 247 GYANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLF 303
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LF
Sbjct: 262 SEANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLF 316
Query: 304 AAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNS 361
A L++L KP+P S S G N M+++ + +TG I + R
Sbjct: 317 AQTLKNL-PFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNV--RKG 373
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKT 414
+ L+ +E +GTW+ R T Q D + N+T L+V +K
Sbjct: 374 YHLDVIELQPSGIVKVGTWDEDRQYRPQRLAPTTAQFDS-VDNSLANKTFIILLSVPNKP 432
Query: 415 FAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+A+L E Y K E Y GY VDLIK +A++L F + FV N YG+ N T
Sbjct: 433 YAQLV-----ETY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKST 484
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+ G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F
Sbjct: 485 NESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTF 544
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW ++ ++LGVSL F L R+S
Sbjct: 545 MDPFSEEVWWFLGFSFLGVSLSFFILGRLS 574
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +V+DLA K G + YG +
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKK 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M S P + N EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 692 YKKMNKFM-SENPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNTKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKDWPHRGKFNNALLELQEQGVLEKMKN 786
>gi|195172564|ref|XP_002027067.1| GL18180 [Drosophila persimilis]
gi|194112845|gb|EDW34888.1| GL18180 [Drosophila persimilis]
Length = 895
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/559 (28%), Positives = 283/559 (50%), Gaps = 55/559 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF AV R+N+D K+L P+ + +++V +DS T + +C G+ AIF P
Sbjct: 42 AFRYAVHRLNRD-KSLLPETNIVYDIEYVSRFDSFDTVQKVCRLVQVGVQAIFSPTDSVL 100
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTF 136
I S+C DIP + + +NV+P ++ +I ++W F
Sbjct: 101 ATHINSICDALDIPDIGR----------STHDFSINVHPSQQYVNNAFIDVIRYLNWTRF 150
Query: 137 TIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESH 196
I+YE ++ L Q+ R + V +R++ + Y +L E KN +
Sbjct: 151 GILYEKDYGIINLHQLS----------RSIQAEVHMRKVSQAS--YLSVLNEFKNKEIHN 198
Query: 197 ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRM 256
I++D S D +LK + M +Y+ Y TS+ + T D +DF+ + NIT+ R+
Sbjct: 199 IIIDISSDGITALLKNILQ-QQMNEYK-YHYFFTSF--DLETFDLEDFKYNFVNITSFRL 254
Query: 257 INPTNPHIRSIMNGW------IYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSL 310
++ + ++ I+ I++E++ L +A T++ E AL++D+VY+FA LQ+L
Sbjct: 255 VDIGDVAVKEILKDLEFFGRTIFQESDANLYLR-KAVTIETEPALIFDSVYVFAIGLQTL 313
Query: 311 GERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY 369
+ L + L+C++ W GL + N + ++ G+TG I + G+R F L+ ++
Sbjct: 314 EQSHTLYLSNLTCDDEIPWNGGLSLINYINAVEWKGLTGPIQF--KEGQRVQFKLDLIKL 371
Query: 370 VSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM 429
+G W LN + E ++ ++ VT L PY+M
Sbjct: 372 KQHSIVKVGEWTPQGYLNIT--------EPSVFFDSGSMNVTLVVITILET-----PYVM 418
Query: 430 ----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 484
KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++ +L
Sbjct: 419 MHYGKNFTGNERFYGFCVDILETISHEVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLM 478
Query: 485 EQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVY 544
+ +ADLA+ +TIT R + +DFT PFM LGISIL++ P + LFSF+ PL+ ++W+Y
Sbjct: 479 KYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPESEPTRLFSFMNPLAIEIWIY 538
Query: 545 MATAYLGVSLLLFFLARIS 563
+ AY VS+ ++ + ++S
Sbjct: 539 VLIAYFLVSISIYIVGKLS 557
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+++ +W FF+LI+++SYTANLAAFLT RM PI+N +DLA I YG +E GS
Sbjct: 602 ATSTRIISSIWGFFSLIIVASYTANLAAFLTTERMINPIENADDLATQTEISYGTLESGS 661
Query: 815 TRNFFK 820
T FF+
Sbjct: 662 TMTFFR 667
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M +M++ + + F + ++G+ RV +G YAF MEST
Sbjct: 657 LESGSTMTF-FRDSMIETYKKMWRSMDNKKQA-FTTTYEDGIRRV--NQGNYAFLMESTM 712
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLD+KGYGIA P S + K S +L+
Sbjct: 713 LDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQ 757
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++
Sbjct: 415 PYVMMHYGKNFTGNERFYGFCVDILETISHEVGFDYILDLVPDRKYGAKDPETGEWNGMV 474
Query: 727 GELQE 731
+L +
Sbjct: 475 AQLMK 479
>gi|327279434|ref|XP_003224461.1| PREDICTED: glutamate receptor 1-like isoform 1 [Anolis
carolinensis]
Length = 903
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 278/575 (48%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ + + PP L P + V DS C+
Sbjct: 25 IQIGGLFPTQQSQEHAAFMFALSQFTE-----PPK--LAPQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFVTPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I FT IY+ L LQ+VL+ A + + ++ + +
Sbjct: 130 QDALISVIEYYKCQKFTYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNIMTATEK 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DY+ L ++ E +++DC ++ IL + ++ G +YIL+ + +D
Sbjct: 184 DYKTLFLNLEKKKERVVVVDCEAERLNAILSKIVKIENNGKGYHYILATLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+ F+ AN+T +++N T+ IM W + N+ V + K +AL YD V
Sbjct: 240 LEKFRTNGANVTGFQLVNDTDTIPAKIMQQW--KNNDAREQPRVDWKKPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL +++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 RVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ G R +++L +E +D K +G WN L + T +Q E ++NRT VT+
Sbjct: 357 EKGHRTNYTLHVMEMKADGIKKIGYWNEDEKLVPTVTDQQGSNETT-TLQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
PY+M +L G Y V+L IA + + Y + ++ YG
Sbjct: 414 -------ILESPYVMNKKSKEKLEGNLKYEGYCVELAAEIAKHVGYNYSLQIVKDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPETKLWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV + +EG++RV + KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVPTTEEGMKRVRRSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 734 TMKVGGNLDSKGYGIATP 751
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M +L G Y V+L IA + + Y + ++ YG +P+T WNG+
Sbjct: 418 PYVMNKKSKEKLEGNLKYEGYCVELAAEIAKHVGYNYSLQIVKDGKYGARDPETKLWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|157423486|gb|AAI53333.1| LOC100127569 protein [Xenopus (Silurana) tropicalis]
Length = 780
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 167/579 (28%), Positives = 288/579 (49%), Gaps = 57/579 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++++ PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLSE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYDRKTVNMLTSFCGALHV----CFITPS-FPVATSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEYYKWKKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAK---EVHLMGDYQNYILSLTSYWINAH 237
YR L +++ S + I++DC ++ IL Q E +++G +YIL+ +
Sbjct: 184 GYRLLFQDLDKSKDRQIVIDCESERLNAILTQVVVKLEKNIIG--YHYILANLGF----M 237
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALM 296
+D Q F+ AN+T +++N T+ + IM W Y+ E+ R V + K +AL
Sbjct: 238 DIDMQKFKEAGANVTGFQLVNYTDTMVSRIMQQWKNYDGREQPR---VDWKKPKYTSALT 294
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A QSL +++ C NP+ W G+ I ++ + ++G++G +
Sbjct: 295 YDGVRVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRLEGLSGNV 354
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E + + + WN L T Q + ++NRT V
Sbjct: 355 QFN-EKGRRTNYTLHVLELKHEGIRHIAHWNEDDKLIPLATDAQAGNDTI-GVQNRTYIV 412
Query: 411 TSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLEREN 464
T+ A PY+M KN + E GY V+L IA + F YK + ++
Sbjct: 413 TTILEA---------PYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDG 463
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG + WNG++GEL RADLA+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 464 KYGARDSDMKAWNGMVGELVYGRADLAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 523
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 524 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 562
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + K S ++++++M + M S+ PSVFVK+ +EG+ RV K KGKYA+ +EST
Sbjct: 665 LDSGSTKEF-FKRSKIAVFEKMWTYMRSAEPSVFVKTTEEGMNRVRKSKGKYAYLLESTM 723
Query: 622 IEY-EVEKNCDLMQVGGLLDSKGYGIAMP 649
EY E K CD M+VGG LDSKGYGIA P
Sbjct: 724 NEYIEQRKPCDTMKVGGNLDSKGYGIATP 752
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ +DLAK I YG ++ GS
Sbjct: 610 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESADDLAKQTEIAYGTLDSGS 669
Query: 815 TRNFFK 820
T+ FFK
Sbjct: 670 TKEFFK 675
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E GY V+L IA + F YK + ++ YG + WNG+
Sbjct: 419 PYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGKYGARDSDMKAWNGM 478
Query: 726 IGEL 729
+GEL
Sbjct: 479 VGEL 482
>gi|410911402|ref|XP_003969179.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like [Takifugu
rubripes]
Length = 1044
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 274/539 (50%), Gaps = 54/539 (10%)
Query: 42 VQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIES-MCQMFDIPHVEAFWDPNK 100
+ ++N T MC +G+ ++ GP S + S +C +IPHV+ +
Sbjct: 76 IYELKNDSQYTTTDTMCQILPKGVVSVIGPASSPASSSAVSHICGEKEIPHVKIGPEETP 135
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
+P V ++P + +S I I+ + T +II + L+ L++++++
Sbjct: 136 K-LPYLRFASVTLHPSNEDLSLAIGSILRSFSYPTTSIICAKAECLLRLEELVQS----- 189
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMG 220
R ++++R L D+ D PLLKEI++ + I++D + + ILK+A E+ +M
Sbjct: 190 --FLISRETLSVRMLD-DSLDPTPLLKEIRDDKVATIIIDANASVSYRILKKANELGMMS 246
Query: 221 DYQNYILSLTSY---WINAHTVDFQDFQPGYANITTVRMINPTN----PHIRSIMNGWIY 273
+ YIL+ + W++ D +N+ M+N ++ IRS+ W
Sbjct: 247 AFYKYILTTMDFPLLWLDNVVGD-------QSNVLGFSMLNSSHVFYLDFIRSLNLSW-- 297
Query: 274 EENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGL 332
G +N + +ALM+DAV++ +A++ L + + PLSC +P WQHG
Sbjct: 298 ---REGCRINPYPGPA-LSSALMFDAVHVVVSAVRQLNRSQEIGVRPLSCTSPLIWQHGT 353
Query: 333 GIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSR 390
+ N ++ + DG+TG I +S+ G+R +++L +E K +GTW N +N +
Sbjct: 354 SLMNYLRMVEHDGLTGHIEFNSR-GQRTNYTLRILERHPGGHKEIGTWFSNNTLVMNST- 411
Query: 391 TVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDL 444
+D E + N+TLTVT+ PY+M+ + G+ VD+
Sbjct: 412 ---SLDLNASETLANKTLTVTT---------ILENPYVMRKSNHQDFQGNNQYEGFCVDM 459
Query: 445 IKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAA 504
++ +A+ L F++K L + YG P G W G++GEL ++ADLA+ TITSER
Sbjct: 460 LRELADILKFSFKIKLVDDGLYGAPEPN-GSWTGMVGELINRKADLAVAGFTITSEREKV 518
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+DF+ PFM LGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S
Sbjct: 519 IDFSKPFMNLGISILYRVHLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLS 577
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS YQRM + M S +PSVFVKS +EG+ RV+ + YAF MEST EY NC+L
Sbjct: 689 NSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSR--YAFLMESTMNEYYRSLNCNLT 746
Query: 634 QVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S F + + G +L+
Sbjct: 747 QIGGLLDTKGYGIGMPLGSPFRDEITLGILQLQ 779
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++ +DLA I+YG + G
Sbjct: 622 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEAPIESPDDLADQTNIQYGTIHGG 681
Query: 814 STRNFF 819
ST FF
Sbjct: 682 STMTFF 687
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 672 PYMMKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ + G+ VD+++ +A+ L F++K L + YG P G W G+
Sbjct: 435 PYVMRKSNHQDFQGNNQYEGFCVDMLRELADILKFSFKIKLVDDGLYGAPEPN-GSWTGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|327279436|ref|XP_003224462.1| PREDICTED: glutamate receptor 1-like isoform 2 [Anolis
carolinensis]
Length = 903
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 278/575 (48%), Gaps = 50/575 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ + + PP L P + V DS C+
Sbjct: 25 IQIGGLFPTQQSQEHAAFMFALSQFTE-----PPK--LAPQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFVTPS-FPVETSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I FT IY+ L LQ+VL+ A + + ++ + +
Sbjct: 130 QDALISVIEYYKCQKFTYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNIMTATEK 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
DY+ L ++ E +++DC ++ IL + ++ G +YIL+ + +D
Sbjct: 184 DYKTLFLNLEKKKERVVVVDCEAERLNAILSKIVKIENNGKGYHYILATLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+ F+ AN+T +++N T+ IM W + N+ V + K +AL YD V
Sbjct: 240 LEKFRTNGANVTGFQLVNDTDTIPAKIMQQW--KNNDAREQPRVDWKKPKYTSALTYDGV 297
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A A QSL +++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 298 RVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ G R +++L +E +D K +G WN L + T +Q E ++NRT VT+
Sbjct: 357 EKGHRTNYTLHVMEMKADGIKKIGYWNEDEKLVPTVTDQQGSNETT-TLQNRTYIVTT-- 413
Query: 415 FAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGT 468
PY+M +L G Y V+L IA + + Y + ++ YG
Sbjct: 414 -------ILESPYVMNKKSKEKLEGNLKYEGYCVELAAEIAKHVGYNYSLQIVKDGKYGA 466
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 467 RDPETKLWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 526
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 609 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 668
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 669 TKEFFR 674
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV + +EG++RV + KGKYA+ +EST EY E K CD
Sbjct: 674 RRSKIAVFEKMWTYMKSAEPSVFVPTTEEGMKRVRRSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 734 TMKVGGNLDSKGYGIATP 751
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M +L G Y V+L IA + + Y + ++ YG +P+T WNG+
Sbjct: 418 PYVMNKKSKEKLEGNLKYEGYCVELAAEIAKHVGYNYSLQIVKDGKYGARDPETKLWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|227908808|ref|NP_001153151.1| glutamate receptor, ionotropic, AMPA 1 [Xenopus laevis]
gi|222875736|gb|ACM69010.1| ionotropic glutamate receptor subunit GluR1(Q)flip [Xenopus laevis]
Length = 902
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 284/576 (49%), Gaps = 52/576 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++++ PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLSE-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ +IFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYSIFGFYDRKTVNMLTSFCGALHV----CFITPS-FPVVTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISVIEYYKWKKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L +++ S + I++DC ++ IL Q ++ +YIL+ + +D
Sbjct: 184 GYRLLFQDLDKSKDRQIVIDCESERLNAILTQVVKLEKNVIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYDA 299
Q F+ AN+T +++N T+ + IM W Y+ E+ R V +T K +AL YD
Sbjct: 240 MQKFKEAGANVTGFQLVNYTDQLVSRIMQQWKNYDGREQPR---VDWKTPKYTSALTYDG 296
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A QSL +++ C NP+ W G+ I ++ + ++G++G + +
Sbjct: 297 VRVMAEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVQLEGLSGNVQFN 356
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ GRR +++L +E + + + WN L T E ++NRT VT+
Sbjct: 357 -EKGRRTNYTLHVLELKLEGIRHIAHWNEDDKLIPLATDAHAGNESI-GVQNRTYIVTT- 413
Query: 414 TFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYG 467
PY+M KN + E GY V+L IA + F YK + ++ YG
Sbjct: 414 --------IMESPYVMLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGKYG 465
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ WNG++GEL RADLA+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 466 ARDSDMKAWNGMVGELVYGRADLAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 525
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
K S ++++++M + M S+ PSVFVK+ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 674 KRSKIAVFEKMWTYMRSAEPSVFVKTTEEGMNRVRKSKGKYAYLLESTMNEYIEQRKPCD 733
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + + A L++ QG
Sbjct: 734 TMKVGGNLDSKGYGIATPKGSAL-RGAVNLAVLKLSEQG 771
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 8/102 (7%)
Query: 727 GELQEQVDTFILFFIYSILFF-IYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTA 778
G+ Q D F I++ L+F + F+ + ++S R+V G+WWFFTLI+ISSYTA
Sbjct: 573 GKEQPTTDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTA 632
Query: 779 NLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
NLAAFLT RM PI++ +DLAK I YG ++ GST+ FFK
Sbjct: 633 NLAAFLTVERMVSPIESADDLAKQTEISYGTLDSGSTKEFFK 674
>gi|116008052|ref|NP_001036733.1| glutamate receptor IIE [Drosophila melanogaster]
gi|113194804|gb|ABI31184.1| glutamate receptor IIE [Drosophila melanogaster]
gi|221046412|gb|ACL97993.1| FI04462p [Drosophila melanogaster]
Length = 897
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 281/570 (49%), Gaps = 59/570 (10%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + + V D+ + +C GIA +F
Sbjct: 48 NTEQMNIVFDHAIDVANQEVGT-----SLTSLKEEVNYGDAYQSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G N++P ++K + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYMSEN--------AEGFNLHPHPADLAKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLL 186
+ +W F +YE+ + L L ++ G+ I L D +Y+ +L
Sbjct: 155 EFNWTRFIFLYESAEYLNILNEL---------TTMLGKSGTVITVLRYDMQLNGNYKQVL 205
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 206 RRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKY 261
Query: 247 GYANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLF 303
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LF
Sbjct: 262 SEANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLF 316
Query: 304 AAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNS 361
A L++L KP+P S S G N M+++ + +TG I + R
Sbjct: 317 AQTLKNL-PFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNV--RKG 373
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKT 414
+ L+ +E +GTW+ R T Q D + N+T L+V +K
Sbjct: 374 YHLDVIELQPSGIVKVGTWDEDRQYRPQRLAPTTAQFDS-VDNSLANKTFIILLSVPNKP 432
Query: 415 FAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+A+L E Y K E Y GY VDLIK +A++L F + FV N YG+ N T
Sbjct: 433 YAQLV-----ETY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKST 484
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+ G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F
Sbjct: 485 NESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTF 544
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW ++ ++LGVSL F L R+S
Sbjct: 545 MDPFSEEVWWFLGFSFLGVSLSFFILGRLS 574
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +V+DLA K G + YG +
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKK 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M S P + N EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 692 YKKMNKFM-SENPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNTKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKDWPHRGKFNNALLELQEQGVLEKMKN 786
>gi|345326178|ref|XP_001510618.2| PREDICTED: glutamate receptor 3 [Ornithorhynchus anatinus]
Length = 929
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 285/580 (49%), Gaps = 61/580 (10%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F N + +AF AV+ N + L V H+++ +S C+ S G
Sbjct: 73 GLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRG 132
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESHLISK 122
+ AIFG + N + S C V + D + F+ + + P +
Sbjct: 133 VYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA---LKG 182
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D ++
Sbjct: 183 AILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----DVQEF 237
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAHTV 239
R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ + +
Sbjct: 238 RRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF----TDL 290
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYD 298
+ G ANIT +++N NP ++ + W+ +E E + N +K +AL +D
Sbjct: 291 VLERVMHGGANITGFQIVNNENPMVQQFLQRWVRLDEREFPEAKN---SPLKYTSALTHD 347
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 348 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQF 407
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRTLT 409
D+ GRR +++++ E + G WN + R V +D++ +ENRT+
Sbjct: 408 DTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFLDQQVSNDSTSVENRTIV 461
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ PY+M KN E E Y GY VDL IA + YK + +
Sbjct: 462 VTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVGIKYKLSIVGD 512
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 513 GKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 572
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 573 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 612
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 727 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 786
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 787 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 831
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 662 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 721
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 722 TKEFFR 727
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 469 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 528
Query: 726 IGEL 729
+GEL
Sbjct: 529 VGEL 532
>gi|195473840|ref|XP_002089200.1| GE25526 [Drosophila yakuba]
gi|194175301|gb|EDW88912.1| GE25526 [Drosophila yakuba]
Length = 913
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 177/581 (30%), Positives = 275/581 (47%), Gaps = 47/581 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI IF E ++A AF A+ +N AL LE I ++V DS+ + C+
Sbjct: 25 VKIGAIFFDTELKLAEAFSAALEEVNAVNGALK----LEAIKRYVTVDDSIVLQDISCDL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHL 119
G+AAIFGP S N +I+E +C M IPH++ W P + N VNV P
Sbjct: 81 IGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSSRERINHQLTVNVAPMELF 140
Query: 120 ISKGISVII--NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+S S I+ DW +FTI YE +L+ LQ +L I+ Q
Sbjct: 141 LSAAFSDILASKSFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIK--------MQEFE 192
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L K I ++ E +LLDC D V ++ + ++ G + + L+ L ++
Sbjct: 193 RGDDYRILWKRINDAREKFVLLDCPSDILVDVVNASIGYNMTGSFNHLFLTNLDTHISGI 252
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+DF ++ VR+ P + ++ + + R SL E+ L+
Sbjct: 253 DQFYSRDFT---VSVAAVRIRTYVPPPVHDEIDVFDNSVDTRFSSL---------ESQLI 300
Query: 297 YDAVYLFAAALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM-----TGRI 350
YD+V LF AL + + P SC WQ G + MK I+ T R+
Sbjct: 301 YDSVVLFYNALLEISQLPGFYIPNFSC-GRGFWQPGPRLVEQMKQISPKLAKPPFKTQRL 359
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL--------NHSRTVEQMDKEKKEK 402
++++ G+R F+LE + D +V WN F L N ++ ++Q + KE
Sbjct: 360 QINAE-GQREDFNLEVYNPIID--RVTHIWNKEFQLVDFEKLRENSTQALKQKRLQTKED 416
Query: 403 IENRTLTVTSKT-FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + T T K ++ EP + GY+VDLI ++A E F + F
Sbjct: 417 FSQKPIKYTVATRVGKPYFSWREEPEGVHFEGNERFEGYAVDLIYLLAQECKFDFNFEPV 476
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
R+N YG+ + T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 477 RDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSY 536
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
K + D+++FL P + +VW+++ A + + L F RI
Sbjct: 537 KEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRI 577
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 587 MESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI 646
M S +P F K+N+EGV+RV KG YAF ME+T ++Y VE+NC+L Q+G K YGI
Sbjct: 702 MLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVERNCELTQIGESFGEKHYGI 761
Query: 647 AMP-TSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
A+P + F + S G LR+ +GE + ++N
Sbjct: 762 AVPLNADFRSNLSVGI--LRLSERGELFKLRN 791
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
V RL+ WW F L++ +Y A LAAF+T+ ++ I ++ DL ++++G + G+
Sbjct: 623 GVPMRLLTAFWWIFALLISQTYIAKLAAFITSAKIAGDIGSLHDLVDQNKVQFGTIRGGA 682
Query: 815 TRNFF 819
T +F
Sbjct: 683 TSVYF 687
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY+VDLI ++A E F + F R+N YG+ + T +W+G+I +L
Sbjct: 454 GYAVDLIYLLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQL 498
>gi|391328742|ref|XP_003738843.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Metaseiulus occidentalis]
Length = 885
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 292/576 (50%), Gaps = 41/576 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+KI GIF ++ +A AF +AV R+N+D L I + V D+L ++ +C+
Sbjct: 27 VKIGGIFDQEDDRLAKAFSLAVDRVNRDMGDLESATFRAKIAR-VLPKDNLAASRHVCDM 85
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
E + A GP S + ++S+ F+IPH ++ + + ++++P+ +
Sbjct: 86 LREKVVAFVGPTSDSVKEYLKSVAATFNIPHFSTDFE----ILERRAPYTLSLHPDLQSL 141
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S+ + I+ D W +IY++ D L+ L+ VL + + + P D +
Sbjct: 142 SRLLRDIVEDKKWRKIAVIYDSDDVLIILKDVLTYGFN--------QSLADVLLYPFDEE 193
Query: 181 -DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
+ +LK+I + ++++ ++ +L ++ +H IL L + ++
Sbjct: 194 LSFEKMLKDIGSQQHYNLIVGLQPERAKQLLLASQGLHSSFYNAYLILDLDFHAVSMSGA 253
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR---AETVKIEAALM 296
+++ +AN+T +R+ +P +++ + ++ R + + E AL+
Sbjct: 254 RMENY---FANVTLIRLADPHREDVKAQQSQKTAAPYANAPAIPTRIHFTSSPQTEEALI 310
Query: 297 YDAVYLFAAALQSLGERKPLP-TPLSC-ENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
YDAV L A ++ SL + ++C + S W +G + + +K +T+ G+TG + LD
Sbjct: 311 YDAVTLIAHSVLSLLRMNAISFQKVNCNKTGSRWDYGQALLDNLKEVTVRGLTGDVRLD- 369
Query: 355 QTGRRNSFSLEFVEY--VSDQWKVLGT--WNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
++G+R++FS + +E S+ W + W GL R E+++ +K+ ++ L V
Sbjct: 370 RSGKRDAFSFDILEINRTSEVWAYRKSVVWEPRSGL-IKRKGEEVEVDKEFSVDGMVLRV 428
Query: 411 TSKTFAKLRVLFQGEPY-MMKNPETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYG 467
V EPY ++ +TG+ GY++DLIKM+A NFT +F + + YG
Sbjct: 429 ---------VTAPNEPYTIIDETKTGQDRFSGYAIDLIKMLAERANFTPEFYIVADGAYG 479
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ + G WNGLIG+L + AD+AI DLT T+ER + VDFT PFM+ GISIL+R P +
Sbjct: 480 S-HQGNGVWNGLIGDLMKHTADIAIVDLTTTAERESVVDFTTPFMSTGISILFRIPEMQP 538
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P LFSF+ P S VW Y T Y+ ++L + L R +
Sbjct: 539 PSLFSFMHPFSIVVWFYTLTTYILITLGTYMLGRFT 574
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Query: 565 GSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY 624
GS R+ +NSN S+Y+RM + MES++PSVF K N EG++RV+K GKYA+ ME+T IEY
Sbjct: 677 GSTQRF-FQNSNNSVYKRMWAYMESTKPSVFPKDNDEGIQRVLK--GKYAYLMEATSIEY 733
Query: 625 EVEKNCDLMQVGGLLDSKGYGIAMP 649
VE+NC+L QVGGLLD+KGYGIA P
Sbjct: 734 LVERNCNLTQVGGLLDNKGYGIATP 758
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
V AVSTR +A +W+FF LI+ISSYTANLAAFLT RM+ PI++ DLAK I YG
Sbjct: 615 LVPRAVSTRTLASLWYFFCLILISSYTANLAAFLTAARMSNPIESANDLAKQTDIAYGAK 674
Query: 811 EMGSTRNFFK 820
+ GST+ FF+
Sbjct: 675 DGGSTQRFFQ 684
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 637 GLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQ-GEPY-MMKNPETGE--LYGYSVDLIK 692
GL+ KG + + +FS LRV+ EPY ++ +TG+ GY++DLIK
Sbjct: 404 GLIKRKGEEVEVDK-----EFSVDGMVLRVVTAPNEPYTIIDETKTGQDRFSGYAIDLIK 458
Query: 693 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
M+A NFT +F + + YG+ + G WNGLIG+L +
Sbjct: 459 MLAERANFTPEFYIVADGAYGS-HQGNGVWNGLIGDLMKH 497
>gi|2895127|gb|AAC02905.1| ionotropic glutamate recetor subunit 3 alpha precursor [Oreochromis
mossambicus]
Length = 886
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 284/576 (49%), Gaps = 45/576 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP- 177
+ + +++ W+ F +Y+T LQ ++E+A ++ + VT R +
Sbjct: 138 -LRGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ-------VTARSVGNI 189
Query: 178 -DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +YR +++E+ E L+DC +D+ IL+Q +YIL+ +
Sbjct: 190 VDPTEYRRIIEEMDRRQEKRFLIDCEVDRINLILEQVVTSGKNSRGYHYILANLGF---- 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ G ANIT ++I+P +P ++ ++GW E + + +K +AL
Sbjct: 246 SNMSLDRVFSGGANITGFQIISPDSPIVQQFLHGW--ERLDEREFPEAKNTPLKYTSALT 303
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 304 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 363
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR++++++ E + +G WN + + V MD++ + +ENRT
Sbjct: 364 QFDT-FGRRSNYTIDVYEMKPGGPRKIGYWN-----EYEKFVYIMDQQVTNESSSVENRT 417
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
+ VT+ A V+++ M+ + E GY VDL IA + YK + + YG
Sbjct: 418 IVVTTIMEAPY-VMYKKNYMQMEGNDRYE--GYCVDLASEIAKHVGIKYKLSIVPDGKYG 474
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 475 ARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 534
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 PGGFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLNEQGLLDKLKN 788
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVPDGKYGARDPETKTWNGMVGEL 490
>gi|194899714|ref|XP_001979403.1| GG15279 [Drosophila erecta]
gi|190651106|gb|EDV48361.1| GG15279 [Drosophila erecta]
Length = 897
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 281/570 (49%), Gaps = 59/570 (10%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + + V D+ + +C GIA +F
Sbjct: 48 NTEQMNIVFDHAIDVANQEVGT-----TLTALKEEVNYGDAYQSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G N++P ++K + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYMSEN--------AEGFNLHPHPADLAKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLL 186
+ +W F +YE+ + L L ++ G+ I L D +Y+ +L
Sbjct: 155 NFNWTRFIFLYESAEYLNILNEL---------TTMLGKSGTVITVLRYDMQLNGNYKQVL 205
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S+++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 206 RRVRKSADNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKY 261
Query: 247 GYANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLF 303
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LF
Sbjct: 262 SEANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLF 316
Query: 304 AAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNS 361
A L+ L KP+P S S G N M+++ + +TG I + R
Sbjct: 317 AETLKHL-PFKPVPQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIYFEGNV--RKG 373
Query: 362 FSLEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKT 414
+ L+ +E +GTW+ R T + D + N+T L+V +K
Sbjct: 374 YHLDVIELQPSGIVKVGTWDEDRQYRPQRLAPTTAEFDS-VDNSLANKTFIILLSVPNKP 432
Query: 415 FAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+A+L E Y K E Y GY VDLIK +A++L F + FV N YG+ N T
Sbjct: 433 YAQLV-----ETY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKST 484
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+ G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F
Sbjct: 485 NESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQKATPELFTF 544
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P S +VW ++ ++LGVSL F L R+S
Sbjct: 545 MDPFSEEVWWFLGFSFLGVSLSFFILGRLS 574
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT I +V+DLA K G + YG +
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIENPQSLINSVDDLADNKDG-VVYGAKK 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M + P + N EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 692 YKKMNKFM-TENPQYLTEDNMEGVNRV-KTNTHYAFLMESTSIEYNTKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKNWPHRGKFNNALLELQEQGVLEKMKN 786
>gi|195116402|ref|XP_002002744.1| GI17553 [Drosophila mojavensis]
gi|193913319|gb|EDW12186.1| GI17553 [Drosophila mojavensis]
Length = 908
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 289/580 (49%), Gaps = 55/580 (9%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF NE+E+ +F+ A R +N + K D+ I +++ DS ++ C S G
Sbjct: 32 AIFYENEKEIELSFDQAFREVN-NLKF--SDLQFVTIKRYMPTNDSFLLQQITCELISNG 88
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHLISKG 123
+AAIFGP S +I+ + IPH+E W N VNV P +S+
Sbjct: 89 VAAIFGPSSKAASDIVAQIANTTGIPHIEYDWKLEATRQEHLNNQMTVNVAPALSALSRA 148
Query: 124 I-SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
+I + +W TFT+IYET + L LQ ++ N H + + + +R L +DY
Sbjct: 149 YYDIIKTNYEWRTFTLIYETPEGLARLQDLM-NIHALNTDY------LKLRNLADYAEDY 201
Query: 183 RPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
R L KE + E HI+LDC +LK + + L G ++++ L+ ++ H+
Sbjct: 202 RVLWKEADETFHEHHIILDCEPKSLRELLKISVDFKLQGPFRHWFLTH----LDTHSSGL 257
Query: 242 QDF--QPGYANITTVRM--INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D + ANIT+VR+ ++P NP+ R + R ++ + + L+Y
Sbjct: 258 KDIYNEDFKANITSVRLKIVDP-NPYAR---------KKTRLTPVDKILGSQMMLPILIY 307
Query: 298 DAVYLFAAA----LQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
DAV LFA + + SLG+ P + S+W G I MK+I+ D + +
Sbjct: 308 DAVVLFANSARNVIASLGQFYPPNSHCGLGFASTWIMGAHIVQEMKTISEDDVEPNFKTE 367
Query: 354 S----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
+ + G+R F+LE + ++ L W G+ V ++ E + I +
Sbjct: 368 NMKINEFGQRTHFNLEIYKPTVNE--PLMVWTPDNGIK----VRRLSPELESAIVTPDFS 421
Query: 410 VTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
V K F V EPY M +N E Y GY+VDLI+ ++ + F Y+F++
Sbjct: 422 VQRKVFTV--VTHHEEPYFMMKQDHENFRGQEKYEGYAVDLIRKLSELMEFDYEFMIVNG 479
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
N G NP+T +W+G+I +L + A + +CDLTIT RR+AVDFT+PFM LGISIL+ K
Sbjct: 480 N--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQLRRSAVDFTVPFMQLGISILHYKS 537
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+Q + F+FLEP + VW+YM A L ++L +AR+S
Sbjct: 538 PPEQKNPFAFLEPFAPQVWIYMIFAQLVMTLAFVLIARLS 577
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+S PS F +NKEGV RV KEKG YAF ME+T + Y +E+NCDL Q
Sbjct: 689 SNDTDYQRAWNQMKSFNPSGFTSTNKEGVARVRKEKGNYAFLMETTSLTYNIERNCDLRQ 748
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+GG + K YG+A+P + + + L++ +GE Y +KN
Sbjct: 749 IGGTIGEKHYGLAVPLGADY-RTNLSVSILQLSEKGELYKLKN 790
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + I +++DL + +K+G + GST F
Sbjct: 626 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSINSLQDLIEQDEVKFGSMRGGSTSLF 685
Query: 819 F 819
F
Sbjct: 686 F 686
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 666 VLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 719
V EPY M +N E Y GY+VDLI+ ++ + F Y+F++ N G NP+T
Sbjct: 430 VTHHEEPYFMMKQDHENFRGQEKYEGYAVDLIRKLSELMEFDYEFMIVNGN--GKYNPET 487
Query: 720 GKWNGLIGEL 729
+W+G+I +L
Sbjct: 488 KQWDGIIRKL 497
>gi|2895125|gb|AAC02904.1| ionotropic glutamate recetor subunit 3 alpha precursor [Oreochromis
mossambicus]
Length = 886
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 284/576 (49%), Gaps = 45/576 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP- 177
+ + +++ W+ F +Y+T LQ ++E+A ++ + VT R +
Sbjct: 138 -LRGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ-------VTARSVGNI 189
Query: 178 -DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +YR +++E+ E L+DC +D+ IL+Q +YIL+ +
Sbjct: 190 VDPTEYRRIIEEMDRRQEKRFLIDCEVDRINLILEQVVTSGKNSRGYHYILANLGF---- 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ G ANIT ++I+P +P ++ ++GW E + + +K +AL
Sbjct: 246 SNMSLDRVFSGGANITGFQIISPDSPIVQQFLHGW--ERLDEREFPEAKNTPLKYTSALT 303
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 304 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 363
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR++++++ E + +G WN + + V MD++ + +ENRT
Sbjct: 364 QFDT-FGRRSNYTIDVYEMKPGGPRKIGYWN-----EYEKFVYIMDQQVTNESSSVENRT 417
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
+ VT+ A V+++ M+ + E GY VDL IA + YK + + YG
Sbjct: 418 IVVTTIMEAPY-VMYKKNYMQMEGNDRYE--GYCVDLASEIAKHVGIKYKLSIVPDGKYG 474
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 475 ARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 534
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 PGGFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 788
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVPDGKYGARDPETKTWNGMVGEL 490
>gi|194744136|ref|XP_001954551.1| GF18326 [Drosophila ananassae]
gi|190627588|gb|EDV43112.1| GF18326 [Drosophila ananassae]
Length = 862
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 168/568 (29%), Positives = 284/568 (50%), Gaps = 55/568 (9%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N++ L + V D+ + +C GIA +F
Sbjct: 13 NTEQMNIIFDHAIDVANQEVGT-----TLTSLKAEVNYGDAYQSYGRLCQMLETGIAGVF 67
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + + S+C DIPH+ ++ ++ G N++P ++K + +I
Sbjct: 68 GPSSRHSALHLMSICDAMDIPHIYSYM--------SDYAEGFNLHPHPADLAKALHSLIT 119
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+ +W F +YE+ D L L ++ P VT+ + + +Y+ +L+
Sbjct: 120 EFNWSRFIFLYESADYLKILNEL-------TTLFGMNGPVVTVLRYDMQLNGNYKQVLRR 172
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ S ++ I++ S D L QA++V ++ + YI+ + H+ D ++++
Sbjct: 173 VRKSQDNRIVVVGSSDTMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKYSE 228
Query: 249 ANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLFAA 305
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LFA
Sbjct: 229 ANITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSC-----PITVEMALTYDAVQLFAE 283
Query: 306 ALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFS 363
L++L KP+ S S G N M+++ + +TG I + R +
Sbjct: 284 TLKNL-PFKPISQNCSQRTESVRDDGSSFKNYMRTLRLSEHLLTGPIYFEGNV--RKGYH 340
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFA 416
L+ +E +G+W+ G R T Q D + N+T L+V +K +A
Sbjct: 341 LDVIELQPSGIVKVGSWDENRGYRPQRLAPTTSQFDG-LDNSLANKTFIVLLSVPNKPYA 399
Query: 417 KLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
+L E Y K E Y GY VDLIK +A++L F + FV N YGT N + +
Sbjct: 400 QLV-----ESY--KQLEGNNQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGTFNKTSNE 451
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
G++ E+ RADLA+ DLTIT+ER A+DF++PFM LGI+ILY KP K P+LF+F++
Sbjct: 452 STGMLREIMMGRADLAVTDLTITAEREQAIDFSIPFMNLGIAILYLKPQKATPELFTFMD 511
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW+++ ++LGVSL F L R+S
Sbjct: 512 PFSEEVWMFLGFSFLGVSLSFFILGRLS 539
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +VEDLA K G + YG
Sbjct: 583 KALSTRTVATFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVEDLANNKDG-VVYGAKR 641
Query: 812 MGSTRNFF 819
GSTR FF
Sbjct: 642 TGSTRTFF 649
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y+RM+ M P + N EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 657 YKRMNQFM-LEHPEHLTQDNMEGVNRV-KSSTHYAFLMESTSIEYNTKRECNLKKIGDAL 714
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D K YGIAM + + F A L + QG MKN
Sbjct: 715 DEKCYGIAM-RKNWPHRNKFNNALLELQEQGVLEKMKN 751
>gi|149412546|ref|XP_001509706.1| PREDICTED: glutamate receptor 1 isoform 2 [Ornithorhynchus
anatinus]
Length = 900
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 283/575 (49%), Gaps = 52/575 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQAQEHAAFRFALSQFTD-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERKTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ + +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKDRQVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W + N+ V +K +AL YD V
Sbjct: 240 LLKFKG--ANVTGFQLVNYTDAVPAKIMQDW--KTNDVKEQSRVDWHRLKYTSALTYDGV 295
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A QSL +++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 296 KVMVDAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 354
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E +D + +G WN + ++ ++NRT VT+
Sbjct: 355 EKGRRTNYTLHVIEMKADGIRKIGYWNEDDKFVPA-AIDTQTGFDNSSVQNRTYIVTT-- 411
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E E Y GY V+L IA + ++Y+ + + YG
Sbjct: 412 -------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 464
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P++ WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 465 RDPESKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 524
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 559
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 607 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 666
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 667 TKEFFR 672
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 672 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 731
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 732 TMKVGGNLDSKGYGIATPKGSAL 754
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + ++Y+ + + YG +P++ WNG
Sbjct: 415 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPESKAWNG 474
Query: 725 LIGEL 729
++GEL
Sbjct: 475 MVGEL 479
>gi|395545799|ref|XP_003774785.1| PREDICTED: glutamate receptor 3 isoform 2 [Sarcophilus harrisii]
Length = 892
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 287/584 (49%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 32 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 91
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 92 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 142
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I +++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 143 -LKGAILNLLSHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----D 196
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 197 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 250
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 251 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKN---SPLKYTSA 306
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 307 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 366
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V +D++ EN
Sbjct: 367 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFLDQQVSNDSSSSEN 420
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 421 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 471
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 472 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 531
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 575
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 690 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 749
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 750 TMKVGGNLDSKGYGVATPKGSTL-RNAVNLAVLKLNEQGLLDKLKN 794
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 625 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 684
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 685 TKEFFR 690
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 432 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 491
Query: 726 IGEL 729
+GEL
Sbjct: 492 VGEL 495
>gi|194760908|ref|XP_001962674.1| GF15572 [Drosophila ananassae]
gi|190616371|gb|EDV31895.1| GF15572 [Drosophila ananassae]
Length = 906
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 293/588 (49%), Gaps = 64/588 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ + IF NE+++ +F+ A R +N D+ PI +++ DS +L C
Sbjct: 30 ISVGAIFYDNEKDIELSFDQAFRDVNNMKYG---DVRFIPIKRYMPTNDSFLLQQLTCEL 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE--AFWDPNKYFIPTNGVHGVNVYPESH 118
S+G+AAIFGP S +I+ + IPH+E D N VNV P
Sbjct: 87 ISDGVAAIFGPSSKAASDIVAQIANTTGIPHIEYDLKLDTATQQEHLNHKMSVNVAPSLT 146
Query: 119 LISKGI-SVIINDMDWDTFTIIYETHDNLVYLQQVLE-NAHDDDKEIRPGRPSVTIRQLP 176
++S+ +I + +W TFT+IYET + L LQ ++ A + D V +R L
Sbjct: 147 VLSRAYYEIIKTNYEWRTFTLIYETPEGLARLQDLMNIQALNSD--------YVKLRNLA 198
Query: 177 PDTDDYRPLLKEIKNSSESH-ILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWI 234
DYR L KE+ + H I+LDC +LK + + L G ++N+ L+ L S+
Sbjct: 199 DYAGDYRVLWKEVDETFHEHRIILDCDPKTLKELLKVSVDFKLQGPFRNWFLTHLDSHSS 258
Query: 235 NAHTVDFQDFQPGYANITTVRMIN-PTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
+ +DF+ ANIT+VR+ N NP R + R ++ +
Sbjct: 259 GLKDIYNEDFK---ANITSVRLKNVDPNPFDR---------KKTRITDVDQILGNQTMLP 306
Query: 294 ALMYDAVYLFA-AALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM----- 346
L+YDAV LF+ +A + + +P P C + + W G I N MK+I+ D +
Sbjct: 307 ILIYDAVVLFSNSARRVIAAMEPYQPPNRYCGSTTPWILGPFIVNEMKTISEDDVEPNFK 366
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENR 406
T + LD + G+R SF+LE + ++ + W G+ R +++
Sbjct: 367 TENMKLD-EYGQRTSFNLEIYKPTVNE--PMMVWTPDNGIKKRRLSLELEN--------- 414
Query: 407 TLTVTSKTFAKLRVLFQ-----GEPYMM-----KNPETGELY-GYSVDLIKMIANELNFT 455
T +++ F++ R ++ EPY M +N E Y GY+VDLI ++ + F
Sbjct: 415 --TASTQDFSEQRRVYTVVTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSEIMEFD 472
Query: 456 YKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
Y+F++ N G NP+T +W+G+I +L + A + +CDLTIT RR+ VDFT+PFM LG
Sbjct: 473 YEFMIVNGN--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQLRRSVVDFTVPFMQLG 530
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ISIL+ K + + F+FLEP + DVW+YM A L ++L F+AR+S
Sbjct: 531 ISILHYKKPPEPKNPFAFLEPFAGDVWIYMIFAQLVITLAFVFIARLS 578
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV RVVKE G YAF ME+T + Y VE+NC+L Q
Sbjct: 690 SNDTDYQRAWNQMKDFEPSAFTSTNKEGVTRVVKEAGGYAFLMETTSLTYNVERNCNLTQ 749
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+GG + K YG+A+P + + + L++ +GE Y +KN
Sbjct: 750 IGGTIGEKHYGLAVPLGADY-RTNLSVSILQLSEKGELYKLKN 791
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL + + +G + GST F
Sbjct: 627 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDEVSFGSMRGGSTSLF 686
Query: 819 F 819
F
Sbjct: 687 F 687
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 671 EPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M +N E Y GY+VDLI ++ + F Y+F++ N G NP+T +W+G
Sbjct: 436 EPYFMMKEDHENFRGREKYEGYAVDLISKLSEIMEFDYEFMIVNGN--GKYNPETKQWDG 493
Query: 725 LIGEL 729
+I +L
Sbjct: 494 IIRKL 498
>gi|161377425|ref|NP_001104484.1| glutamate receptor 2 isoform 2 precursor [Gallus gallus]
Length = 883
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 284/583 (48%), Gaps = 61/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I W F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWTKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ +P + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYDDPLVSKFIQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIENR 406
I D Q G+R +F++ +E S + +G W+ V +D + +EN+
Sbjct: 360 IKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNESSGLENK 414
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E GY VDL IA F YK +
Sbjct: 415 TIIVTT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTI 465
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+
Sbjct: 466 VGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMI 525
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|229892283|ref|NP_001153154.1| glutamate receptor, ionotropic, AMPA 3 precursor [Xenopus laevis]
gi|222875740|gb|ACM69012.1| ionotropic glutamate receptor subunit GluR3(Q)flop [Xenopus laevis]
Length = 887
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 285/586 (48%), Gaps = 65/586 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 INIGGLFMRNTIQEHSAFLFAVQLHNTNQNNTERPFQLFHHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C + + + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFITSSFPTDADVQFV-------IQMRPP-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-- 176
+ I ++N+ DW F +Y+T LQ ++E A ++ + VT R +
Sbjct: 139 -LKGAILTLLNEYDWQKFVYLYDTERGFSILQAIMEAAVQNNWQ-------VTARSVGNV 190
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYW 233
D +++ +++E+ E ++ C +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 191 KDVQEFKRIIEEMDRRQEKRFVIGCEVERINTILEQ---VVILGKHTRGYHYMLANLGF- 246
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIE 292
+ + G AN+T +++N NP ++ + W+ +E E + N +K
Sbjct: 247 ---TGIALERVMHGGANVTGFQIVNNENPIVQQFLQRWVRLDEREFPEARNA---PLKYT 300
Query: 293 AALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM 346
+AL +DAV + A A + L R+ + W G+ I +K + + GM
Sbjct: 301 SALTHDAVLVIAEAFRYLRRQRVDVSRRGIAGDCLANPAVPWSQGIDIERALKMVQVQGM 360
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKI 403
TG I D+ GRR +++++ E + + +G WN + R V D++ + +
Sbjct: 361 TGNIQFDTY-GRRTNYTIDVYEMTPTKPRKVGHWN-----EYERFVAVPDQQPTNESSSV 414
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYK 457
EN+T+ VT+ PY+MK + + Y GY VDL IA + YK
Sbjct: 415 ENKTIVVTT---------ILENPYVMKKKNHELLDGNDRYEGYCVDLASEIAKHVGIKYK 465
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGIS
Sbjct: 466 LSIVEDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGIS 525
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
I+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 IMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 685 RRSKIAVYEKMWSYMKSAEPSVFTKTTDDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 789
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+MK + + Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMKKKNHELLDGNDRYEGYCVDLASEIAKHVGIKYKLSIVEDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|987862|emb|CAA61679.1| AMPA receptor GluR2/B [Gallus gallus]
Length = 883
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 284/583 (48%), Gaps = 61/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I W F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWTKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ +P + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYDDPLVSKFIQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIENR 406
I D Q G+R +F++ +E S + +G W+ V +D + +EN+
Sbjct: 360 IKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNESSGLENK 414
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E GY VDL IA F YK +
Sbjct: 415 TIIVTT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTI 465
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+
Sbjct: 466 VGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMI 525
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGT-PVNLAVLKLSEQGVLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|334350141|ref|XP_001379634.2| PREDICTED: glutamate receptor 3 [Monodelphis domestica]
Length = 888
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 287/584 (49%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I +++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 139 -LKGAILNLLSHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKN---SPLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V +D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFLDQQVSNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSTL-RNAVNLAVLKLNEQGLLDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|161377423|ref|NP_001001775.2| glutamate receptor 2 isoform 1 precursor [Gallus gallus]
Length = 883
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 284/583 (48%), Gaps = 61/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I W F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWTKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ +P + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYDDPLVSKFIQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIENR 406
I D Q G+R +F++ +E S + +G W+ V +D + +EN+
Sbjct: 360 IKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNESSGLENK 414
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E GY VDL IA F YK +
Sbjct: 415 TIIVTT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTI 465
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+
Sbjct: 466 VGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMI 525
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|149412548|ref|XP_001509669.1| PREDICTED: glutamate receptor 1 isoform 1 [Ornithorhynchus
anatinus]
Length = 900
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 283/575 (49%), Gaps = 52/575 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQAQEHAAFRFALSQFTD-----PPKLL--PQIDIVNISDSFEMTYTFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG + N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERKTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ + +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKDRQVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W + N+ V +K +AL YD V
Sbjct: 240 LLKFKG--ANVTGFQLVNYTDAVPAKIMQDW--KTNDVKEQSRVDWHRLKYTSALTYDGV 295
Query: 301 YLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ A QSL +++ C NP+ W G+ I ++ + +G+TG + +
Sbjct: 296 KVMVDAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN- 354
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR +++L +E +D + +G WN + ++ ++NRT VT+
Sbjct: 355 EKGRRTNYTLHVIEMKADGIRKIGYWNEDDKFVPA-AIDTQTGFDNSSVQNRTYIVTT-- 411
Query: 415 FAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGT 468
+PY+M KN E E Y GY V+L IA + ++Y+ + + YG
Sbjct: 412 -------ILEDPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGA 464
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P++ WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 465 RDPESKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 524
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 559
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 607 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 666
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 667 TKEFFR 672
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 672 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 731
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 732 TMKVGGNLDSKGYGIATPKGSAL 754
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E E Y GY V+L IA + ++Y+ + + YG +P++ WNG
Sbjct: 415 DPYVMLKKNANQFEGNERYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPESKAWNG 474
Query: 725 LIGEL 729
++GEL
Sbjct: 475 MVGEL 479
>gi|198450672|ref|XP_001358080.2| GA14772 [Drosophila pseudoobscura pseudoobscura]
gi|198131138|gb|EAL27216.2| GA14772 [Drosophila pseudoobscura pseudoobscura]
Length = 904
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/565 (29%), Positives = 276/565 (48%), Gaps = 50/565 (8%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ N + P+V E +S+ +CN G+ A+
Sbjct: 45 DRIRQTFEHAISVANNELSV--------PLVGQTEQVSYGNSVQAFAQLCNMMQSGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP + + + + C DIP V N G N++P I+ + II
Sbjct: 97 FGPAAKHTASHLLNACDSKDIPFVYPHLSGNAQ------ADGFNLHPHQEDIANALYGII 150
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKE 188
DW F YE+ + L L ++ I+ R + + +Y+ +L+
Sbjct: 151 KQFDWSRFIFCYESPEYLAILDHLMTLYGIKGPVIKVMRYDLNL------NGNYKSVLRR 204
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
I+ S +S I++ S + +L+QA++V +M + Y++ ++ HT + ++++
Sbjct: 205 IRKSEDSRIVVVGSREGVAELLRQAQQVGIMNEDYTYVIGN----LDLHTFELEEYKYSE 260
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
ANIT +RM +P +R ++ +++E + A T+ + AL YDAV + A +
Sbjct: 261 ANITGIRMFSPDQEEVRDLVER-LHQELGESEPADNGASTITMAMALTYDAVRVIAETTK 319
Query: 309 SLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITID--GMTGRINLDSQTGRRNSFSL 364
L + P L+C E + Q G N M+S+ I +TGRI + R F+
Sbjct: 320 HLPYQ---PQILNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIFFEGNV--RKGFTF 374
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
+ +E + +GTW R + ++ I++ +L +KTF K+ +
Sbjct: 375 DVIELQTSGLVKVGTWEEGQEFQFKRPAQVINFND---IDDGSLV--NKTF-KVLISVAT 428
Query: 425 EPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
+PY ++ + +T + GY VDLIK +A++L F + F L+ YG+ N T G
Sbjct: 429 KPYASLVDSIDTLIGNNQYQGYGVDLIKELADKLGFNFTF-LDGGIDYGSFNKTTNTTTG 487
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF++P S
Sbjct: 488 MLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFMDPFS 547
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW+Y+ AY+GVSL F L R+S
Sbjct: 548 EEVWLYLGIAYVGVSLCFFILGRLS 572
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+++STR +A +WWFFTLIM+SSYTANLAAFLT PI +VEDLA K G ++YG
Sbjct: 616 KSLSTRTIAAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVEDLADNKEG-VQYGAKR 674
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 675 TGSTRNFF 682
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ M ++ PS+ + +N++GVE+V K KYAF M
Sbjct: 668 VQYGAKRTGSTRNFFLTSEDPIYMKMNEYM-TNNPSMLLDNNQDGVEKV-KSGNKYAFLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDALDEKGYGIAM-VKNWPYRDKFNNALLELQEQGVLARLKN 784
>gi|395545797|ref|XP_003774784.1| PREDICTED: glutamate receptor 3 isoform 1 [Sarcophilus harrisii]
Length = 892
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 287/584 (49%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 32 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 91
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 92 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 142
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I +++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 143 -LKGAILNLLSHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----D 196
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 197 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 250
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 251 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKN---SPLKYTSA 306
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 307 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 366
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V +D++ EN
Sbjct: 367 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFLDQQVSNDSSSSEN 420
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 421 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 471
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 472 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 531
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 575
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 690 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 749
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 750 TMKVGGNLDSKGYGVATPKGSTL-RTPVNLAVLKLSEQGILDKLKN 794
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 625 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 684
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 685 TKEFFR 690
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 432 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 491
Query: 726 IGEL 729
+GEL
Sbjct: 492 VGEL 495
>gi|195166250|ref|XP_002023948.1| GL27140 [Drosophila persimilis]
gi|194106108|gb|EDW28151.1| GL27140 [Drosophila persimilis]
Length = 902
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/565 (29%), Positives = 276/565 (48%), Gaps = 50/565 (8%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ N + P+V E +S+ +CN G+ A+
Sbjct: 45 DRIRQTFEHAISVANNELSV--------PLVGQTEQVSYGNSVQAFAQLCNMMQSGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP + + + + C DIP V N G N++P I+ + II
Sbjct: 97 FGPAAKHTASHLLNACDSKDIPFVYPHLSGNAQ------ADGFNLHPHQEDIANALYGII 150
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKE 188
DW F YE+ + L L ++ I+ R + + +Y+ +L+
Sbjct: 151 KQFDWSRFIFCYESPEYLAILDHLMTLYGIKGPVIKVMRYDLNL------NGNYKSVLRR 204
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
I+ S +S I++ S + +L+QA++V +M + Y++ ++ HT + ++++
Sbjct: 205 IRKSEDSRIVVVGSREGVAELLRQAQQVGIMNEDYTYVIGN----LDLHTFELEEYKYSE 260
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
ANIT +RM +P +R ++ +++E + A T+ + AL YDAV + A +
Sbjct: 261 ANITGIRMFSPDQEEVRDLVER-LHQELGESEPADNGASTITMAMALTYDAVRVIAETTK 319
Query: 309 SLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITID--GMTGRINLDSQTGRRNSFSL 364
L + P L+C E + Q G N M+S+ I +TGRI + R F+
Sbjct: 320 HLPYQ---PQILNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIFFEGNV--RKGFTF 374
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
+ +E + +GTW R + ++ I++ +L +KTF K+ +
Sbjct: 375 DVIELQTSGLVKVGTWEEGQEFEFKRPAQVINFND---IDDGSLV--NKTF-KVLISVAT 428
Query: 425 EPY--MMKNPET----GELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
+PY ++ + +T + GY VDLIK +A++L F + F L+ YG+ N T G
Sbjct: 429 KPYASLVDSIDTLIGNNQYQGYGVDLIKELADKLGFNFTF-LDGGIDYGSFNKTTNTTTG 487
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY KP K P LFSF++P S
Sbjct: 488 MLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFMDPFS 547
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW+Y+ AY+GVSL F L R+S
Sbjct: 548 EEVWLYLGIAYVGVSLCFFILGRLS 572
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+++STR +A +WWFFTLIM+SSYTANLAAFLT PI +VEDLA K G ++YG
Sbjct: 616 KSLSTRTIAAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVEDLADNKEG-VQYGAKR 674
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 675 TGSTRNFF 682
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ M ++ PS+ + +N++GVE+V K KYAF M
Sbjct: 668 VQYGAKRTGSTRNFFLTSEDPIYMKMNEYM-TNNPSMLLDNNQDGVEKV-KSGNKYAFLM 725
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IE+ + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 726 ESTSIEFNTVRECNLTKVGDALDEKGYGIAM-VKNWPYRDKFNNALLELQEQGVLARLKN 784
>gi|440911352|gb|ELR61033.1| Glutamate receptor 3 [Bos grunniens mutus]
Length = 894
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 285/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ ++ W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQHVIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|410915382|ref|XP_003971166.1| PREDICTED: glutamate receptor 3-like isoform 1 [Takifugu rubripes]
Length = 886
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 278/573 (48%), Gaps = 39/573 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRRSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++ +A ++ + VT R +
Sbjct: 138 -LRGAIRSLLAYYKWEKFVYLYDTDRGFSILQDIMASAVANNWQ-------VTARSVGNI 189
Query: 179 TD--DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +YR +++E+ E L+DC +D+ +IL+Q G +YIL+ +
Sbjct: 190 VDPIEYRRIIEEMDRRQEKRFLIDCEVDRINSILEQVVTSGKNGRGYHYILANLGF---- 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ G ANIT ++I+P +P ++ + W E + + +K +AL
Sbjct: 246 SNMSLDRVFSGGANITGFQIISPDSPIVQQFLQRW--ERLDEREFPEAKNTPLKYTSALT 303
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 304 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 363
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D+ GRR +++++ E S + +G WN N ++Q + +ENRT+ V
Sbjct: 364 QFDT-FGRRANYTIDVYEMKSGGPRRIGYWNEY--ENFVYVMDQQVTNESSSVENRTIVV 420
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLN 470
T+ A V+++ M + E GY VDL IA + YK + + YG +
Sbjct: 421 TTIMEAPY-VMYKKNYMQMDGNDRYE--GYCVDLASEIAKHVGIRYKLSIVPDGKYGARD 477
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +
Sbjct: 478 PETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 537
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 538 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPTVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 788
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIRYKLSIVPDGKYGARDPETKTWNGMVGEL 490
>gi|213982735|ref|NP_001135539.1| glutamate receptor 2 precursor [Xenopus (Silurana) tropicalis]
gi|195539629|gb|AAI68009.1| Unknown (protein for MGC:184842) [Xenopus (Silurana) tropicalis]
Length = 767
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 288/580 (49%), Gaps = 55/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMLLYSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVFAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL+ A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDAAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEIKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ +P + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYDDPLVAKFIQRWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DAV + A ++L +++ C NP+ W HG+ I +K + ++G++G
Sbjct: 300 TFDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E S+ + +G W+ + + T + + +EN+T+
Sbjct: 360 IKFD-QNGKRVNYTINIMELKSNGPRKIGYWSEVDKMVVTVT-DVLSANDSMGLENKTVI 417
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERE 463
VT+ A PY+M KN + E GY VDL IA F YK + +
Sbjct: 418 VTTILEA---------PYVMFKKNADQFEGNDRYEGYCVDLAAEIARHCGFKYKLTIVAD 468
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 469 GKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKP 528
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 529 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVKTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 741 TMKVGGNLDSKGYGIATP 758
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E GY VDL IA F YK + + YG + +T WNG+
Sbjct: 425 PYVMFKKNADQFEGNDRYEGYCVDLAAEIARHCGFKYKLTIVADGKYGARDAETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|195391025|ref|XP_002054166.1| GJ24289 [Drosophila virilis]
gi|194152252|gb|EDW67686.1| GJ24289 [Drosophila virilis]
Length = 901
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 275/565 (48%), Gaps = 49/565 (8%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N L + + + V D+ H+ +C GIA +F
Sbjct: 48 NTEQMNIVFDHAIEVAN-----LELGLAMSSLKAEVNYGDAYHSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ + G N++P ISK + +I
Sbjct: 103 GPSSRHTAVHLMSICDAMDIPHIYSYM--------SEYAEGFNLHPHPVDISKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+W F +YE+ + L L ++ + P VT+ + + +Y+P+L+
Sbjct: 155 AFEWSRFIFLYESAEYLSILNEL-------NSLFGMNGPIVTVLRYDMQLNGNYKPVLRR 207
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ S ++ I++ S + L QA++V ++ + +YI+ + H D ++++
Sbjct: 208 VRKSIDNRIVVVGSTETVPEFLNQAQQVGIINEDYSYIIGNLDF----HAFDLEEYKYSE 263
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
ANIT++RM +P ++ +M Y N + + +E AL YDAV LFA L+
Sbjct: 264 ANITSLRMFSPEKMAVKELMQKMGY--NNDPDDFRNGSCPITVEMALTYDAVQLFAETLK 321
Query: 309 SLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFSLEF 366
+L KP+ S S G N M+++ + +TG I + R + L+
Sbjct: 322 NL-PVKPVSQNCSQRTESVRDDGSSFKNYMRTLRLKERLLTGPIYFEGNV--RKGYHLDV 378
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFAKLR 419
+E +GTW G R T Q D + N+T L+V++K +A L
Sbjct: 379 IELQPSGIIKVGTWEEERGYRPERLAPTNSQFDN-IDNSLANKTFIVLLSVSNKPYASLV 437
Query: 420 VLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
E Y K E Y GY VDLIK +A++L F + F N YG+ N + + G
Sbjct: 438 -----ESY--KQLEGNSQYEGYGVDLIKELADKLGFNFTFK-NGGNDYGSYNKTSNESTG 489
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ ADLA+ DLTITSER A+DF++PFM LGI+ILY KP K P+LF+F++P S
Sbjct: 490 MLREIMHGYADLAVTDLTITSEREEAIDFSIPFMNLGIAILYLKPQKATPELFTFMDPFS 549
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW ++ ++L VSL F L R+S
Sbjct: 550 EEVWWFLGLSFLAVSLSFFILGRLS 574
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +V+DLA+ + YG
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLAENKDGVVYGAKRT 677
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 678 GSTRNFF 684
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y +M+ M + P ++N+EGV+RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 692 YVKMNKFM-TEHPEHLTETNQEGVDRV-KTSTHYAFLMESTSIEYNTKRECNLKKIGDAL 749
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 750 DEKGYGIAM-RKNWPHRDKFNNALLELQEQGVLEKMKN 786
>gi|348538848|ref|XP_003456902.1| PREDICTED: glutamate receptor 3-like isoform 1 [Oreochromis
niloticus]
Length = 886
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/576 (27%), Positives = 283/576 (49%), Gaps = 45/576 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP- 177
+ + +++ W+ F +Y+T LQ ++E+A ++ + VT R +
Sbjct: 138 -LRGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ-------VTARSVGNI 189
Query: 178 -DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +YR +++E+ E L+DC +D+ IL+Q +YIL+ +
Sbjct: 190 VDPTEYRRIIEEMDRRQEKRFLIDCEVDRINLILEQVVTSGKNSRGYHYILANLGF---- 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ G ANIT ++I+P +P ++ + W E + + +K +AL
Sbjct: 246 SNMSLDRVFSGGANITGFQIISPDSPIVQQFLQRW--ERLDEREFPEAKNTPLKYTSALT 303
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 304 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 363
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR++++++ E + +G WN + + V MD++ + +ENRT
Sbjct: 364 QFDT-FGRRSNYTIDVYEMKPGGPRKIGYWN-----EYEKFVYIMDQQVTNESSSVENRT 417
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
+ VT+ A V+++ M+ + E GY VDL IA + YK + + YG
Sbjct: 418 IVVTTIMEAPY-VMYKKNYMQMEGNDRYE--GYCVDLASEIAKHVGIKYKLSIVPDGKYG 474
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 475 ARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 534
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 788
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVPDGKYGARDPETKTWNGMVGEL 490
>gi|348538850|ref|XP_003456903.1| PREDICTED: glutamate receptor 3-like isoform 2 [Oreochromis
niloticus]
Length = 886
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/576 (27%), Positives = 283/576 (49%), Gaps = 45/576 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP- 177
+ + +++ W+ F +Y+T LQ ++E+A ++ + VT R +
Sbjct: 138 -LRGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ-------VTARSVGNI 189
Query: 178 -DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +YR +++E+ E L+DC +D+ IL+Q +YIL+ +
Sbjct: 190 VDPTEYRRIIEEMDRRQEKRFLIDCEVDRINLILEQVVTSGKNSRGYHYILANLGF---- 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ G ANIT ++I+P +P ++ + W E + + +K +AL
Sbjct: 246 SNMSLDRVFSGGANITGFQIISPDSPIVQQFLQRW--ERLDEREFPEAKNTPLKYTSALT 303
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 304 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 363
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR++++++ E + +G WN + + V MD++ + +ENRT
Sbjct: 364 QFDT-FGRRSNYTIDVYEMKPGGPRKIGYWN-----EYEKFVYIMDQQVTNESSSVENRT 417
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYG 467
+ VT+ A V+++ M+ + E GY VDL IA + YK + + YG
Sbjct: 418 IVVTTIMEAPY-VMYKKNYMQMEGNDRYE--GYCVDLASEIAKHVGIKYKLSIVPDGKYG 474
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 475 ARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 534
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 788
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVPDGKYGARDPETKTWNGMVGEL 490
>gi|251840|gb|AAB22591.1| glutamate receptor subunit [Homo sapiens]
Length = 980
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 165/587 (28%), Positives = 287/587 (48%), Gaps = 64/587 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETV---KIEAALMYDAVYLFAAA 306
M N ++P +RS+ W N A T + AALM+DAV++ +A
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW---------RENCEASTYLGPALSAALMFDAVHVVVSA 317
Query: 307 LQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLE 365
++ L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLR 376
Query: 366 FVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
+E + +G W N +N + +D + + N+TL VT+
Sbjct: 377 ILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------IL 423
Query: 424 GEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
PY+M+ P L G + VD+++ +A L F Y+ L + YG P G W
Sbjct: 424 ENPYVMRRPNFQGLSGNERFEGFCVDMLRELAELLPFPYRLRLVEDGLYGAPEPN-GSWT 482
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P
Sbjct: 483 GMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPF 542
Query: 538 SFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
S VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 543 SPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ V+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIAAVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ P L G + VD+++ +A L F Y+ L + YG P G W G+
Sbjct: 426 PYVMRRPNFQGLSGNERFEGFCVDMLRELAELLPFPYRLRLVEDGLYGAPEPN-GSWTGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|410915384|ref|XP_003971167.1| PREDICTED: glutamate receptor 3-like isoform 2 [Takifugu rubripes]
Length = 886
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 278/573 (48%), Gaps = 39/573 (6%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRRSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++ +A ++ + VT R +
Sbjct: 138 -LRGAIRSLLAYYKWEKFVYLYDTDRGFSILQDIMASAVANNWQ-------VTARSVGNI 189
Query: 179 TD--DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +YR +++E+ E L+DC +D+ +IL+Q G +YIL+ +
Sbjct: 190 VDPIEYRRIIEEMDRRQEKRFLIDCEVDRINSILEQVVTSGKNGRGYHYILANLGF---- 245
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ G ANIT ++I+P +P ++ + W E + + +K +AL
Sbjct: 246 SNMSLDRVFSGGANITGFQIISPDSPIVQQFLQRW--ERLDEREFPEAKNTPLKYTSALT 303
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 304 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 363
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D+ GRR +++++ E S + +G WN N ++Q + +ENRT+ V
Sbjct: 364 QFDT-FGRRANYTIDVYEMKSGGPRRIGYWNEY--ENFVYVMDQQVTNESSSVENRTIVV 420
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLN 470
T+ A V+++ M + E GY VDL IA + YK + + YG +
Sbjct: 421 TTIMEAPY-VMYKKNYMQMDGNDRYE--GYCVDLASEIAKHVGIRYKLSIVPDGKYGARD 477
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +
Sbjct: 478 PETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 537
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 538 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPTVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 788
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIRYKLSIVPDGKYGARDPETKTWNGMVGEL 490
>gi|390480179|ref|XP_003735862.1| PREDICTED: glutamate receptor 3 isoform 2 [Callithrix jacchus]
gi|403279191|ref|XP_003931147.1| PREDICTED: glutamate receptor 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 894
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|380015490|ref|XP_003691734.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like, partial
[Apis florea]
Length = 630
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 168/587 (28%), Positives = 275/587 (46%), Gaps = 90/587 (15%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI IF ++++ +T AF+ AV +INK+ + + P LE +Q+V DS H +K C
Sbjct: 26 VKIGAIFTHDQKDSSTELAFKYAVYKINKE-RLILPKTTLEYDIQYVPKDDSFHASKKAC 84
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ A+FGP I S+C DIPH+EA D + K F +N+YP
Sbjct: 85 QQVKYGVQAVFGPSDPILGQHIHSICDALDIPHLEARLDLDTEAKEF-------SINLYP 137
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE LV L++++ + + E V +RQ
Sbjct: 138 AQSLLNAAYQDIMEFLNWTKVAIIYEDDYGLVKLRELVRSPKSQEME-------VNLRQA 190
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L E+K+ ++++D + L+ ++ M DY+ + L T +
Sbjct: 191 DPDS--YRQVLSEMKSKEIRNLIVDTRPEHMHHFLRMILQLQ-MNDYKYHYLFTT---FD 244
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ + NIT R+++ + +RSI+ + G ++ ++ ++ E AL
Sbjct: 245 IETFDLEDFKYNFVNITAFRLVDAEDVGVRSILRD-MERYQPSGNTILNKSRVIQAEPAL 303
Query: 296 MYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
MYD+V +FA L++L + L P +SCE W GL + N + S+ + G++G I
Sbjct: 304 MYDSVQVFAVGLRTLEQSHALRPANISCEMEHPWDGGLSLINYINSVEMKGISGPIEF-- 361
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVE--------------------- 393
+ GRR F L+ ++ +G W G+N + T
Sbjct: 362 KEGRRIQFKLDLLKLKQHSLVKVGEWRPGIGVNVTDTAAFFEPGAANVTLLVITILEIPY 421
Query: 394 -QMDKEKKEKIENR-------TLTVTSKT--FAKLRVLFQGEPYMMKNPETGE------- 436
M EK R L ++ F+ L Y K+PETGE
Sbjct: 422 VMMHYEKNYTGNARFYGFCVDLLEAVAREVGFSYRLELVPDRKYGAKDPETGEWNGIVRE 481
Query: 437 ----------------------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G+ +DL+K IA+ + F YK L + YG N +TG
Sbjct: 482 LMRHEQPYVMVKNRGNFSGNARYEGFCIDLLKEIAHMVGFGYKIELVPDGKYGVYNYETG 541
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+WNG++ +L +++ADLA+ +TI R + +DFT PFM LGISIL++
Sbjct: 542 EWNGIVRQLMDKKADLAVGSMTINYARESVIDFTKPFMNLGISILFK 588
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E I+++++ K L++VG G + T+ F + L +
Sbjct: 361 FKEGRRIQFKLDLLKLKQHSLVKVGEWRPGIGVNVT-DTAAFFEPGAANVTLLVITILEI 419
Query: 672 PYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + E YG+ VDL++ +A E+ F+Y+ L + YG +P+TG+WNG++
Sbjct: 420 PYVMMHYEKNYTGNARFYGFCVDLLEAVAREVGFSYRLELVPDRKYGAKDPETGEWNGIV 479
Query: 727 GELQEQVDTFIL 738
EL +++
Sbjct: 480 RELMRHEQPYVM 491
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 30/122 (24%)
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGE----------------- 682
+++ YG + + +A+ GF+ L Y K+PETGE
Sbjct: 433 NARFYGFCVDLLEAVAR-EVGFSYRLELVPDRKYGAKDPETGEWNGIVRELMRHEQPYVM 491
Query: 683 ------------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 730
G+ +DL+K IA+ + F YK L + YG N +TG+WNG++ +L
Sbjct: 492 VKNRGNFSGNARYEGFCIDLLKEIAHMVGFGYKIELVPDGKYGVYNYETGEWNGIVRQLM 551
Query: 731 EQ 732
++
Sbjct: 552 DK 553
>gi|296236329|ref|XP_002763276.1| PREDICTED: glutamate receptor 3 isoform 1 [Callithrix jacchus]
gi|403279189|ref|XP_003931146.1| PREDICTED: glutamate receptor 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 894
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|426397313|ref|XP_004064866.1| PREDICTED: glutamate receptor 3 isoform 1 [Gorilla gorilla gorilla]
Length = 894
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -ADILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|291408141|ref|XP_002720316.1| PREDICTED: Glutamate receptor 3-like [Oryctolagus cuniculus]
Length = 894
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|311276900|ref|XP_003135403.1| PREDICTED: glutamate receptor 3-like isoform 1 [Sus scrofa]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|163659856|ref|NP_015564.4| glutamate receptor 3 isoform 1 precursor [Homo sapiens]
gi|168277540|dbj|BAG10748.1| glutamate receptor 3 precursor [synthetic construct]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|426397315|ref|XP_004064867.1| PREDICTED: glutamate receptor 3 isoform 2 [Gorilla gorilla gorilla]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -ADILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|329663180|ref|NP_001192988.1| glutamate receptor 3 precursor [Bos taurus]
gi|426257591|ref|XP_004022409.1| PREDICTED: glutamate receptor 3 isoform 1 [Ovis aries]
gi|296471306|tpg|DAA13421.1| TPA: glutamate receptor, ionotropic, AMPA 3-like [Bos taurus]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|410298300|gb|JAA27750.1| glutamate receptor, ionotrophic, AMPA 3 [Pan troglodytes]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|332861575|ref|XP_003317711.1| PREDICTED: glutamate receptor 3 isoform 1 [Pan troglodytes]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|380812022|gb|AFE77886.1| glutamate receptor 3 isoform 1 precursor [Macaca mulatta]
gi|380812024|gb|AFE77887.1| glutamate receptor 3 isoform 1 precursor [Macaca mulatta]
gi|380812026|gb|AFE77888.1| glutamate receptor 3 isoform 1 precursor [Macaca mulatta]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|311276902|ref|XP_003135404.1| PREDICTED: glutamate receptor 3-like isoform 2 [Sus scrofa]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|332861577|ref|XP_003317712.1| PREDICTED: glutamate receptor 3 isoform 2 [Pan troglodytes]
gi|256997156|dbj|BAI22771.1| glutamate receptor, ionotropic, AMPA 3 [Pan troglodytes]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|355757675|gb|EHH61200.1| hypothetical protein EGM_19152 [Macaca fascicularis]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|345307484|ref|XP_003428583.1| PREDICTED: glutamate receptor 2 isoform 3 [Ornithorhynchus
anatinus]
Length = 883
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEIKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYEDSLVSKFVQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-EIPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + +T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDAETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|426257593|ref|XP_004022410.1| PREDICTED: glutamate receptor 3 isoform 2 [Ovis aries]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|395754404|ref|XP_003779769.1| PREDICTED: glutamate receptor 3 isoform 2 [Pongo abelii]
gi|397505239|ref|XP_003823177.1| PREDICTED: glutamate receptor 3 isoform 2 [Pan paniscus]
gi|119632271|gb|EAX11866.1| glutamate receptor, ionotrophic, AMPA 3, isoform CRA_b [Homo
sapiens]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|163659858|ref|NP_000819.3| glutamate receptor 3 isoform 2 precursor [Homo sapiens]
gi|558588|emb|CAA57567.1| glutamate receptor subunit GluRC [Homo sapiens]
Length = 894
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|125977632|ref|XP_001352849.1| GA21081 [Drosophila pseudoobscura pseudoobscura]
gi|54641600|gb|EAL30350.1| GA21081 [Drosophila pseudoobscura pseudoobscura]
Length = 994
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 296/617 (47%), Gaps = 90/617 (14%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 46 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 103
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 104 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---Q 159
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 160 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 212
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 213 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNH 271
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET---V 289
W + D +F G NIT R+++ +R + E + +
Sbjct: 272 WPS----DVAEF--GAINITGFRIVDTNRRAVRDFHDSRKRLEPSGSGLGAAGGNSLPAI 325
Query: 290 KIEAALMYDAVYLFAAALQSLGERKP-------------------------LPTPLSCEN 324
+AALMYDAV++ A + +KP L C
Sbjct: 326 SAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGGSSSSSGTNESSALLDCNT 385
Query: 325 P----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGT 379
+ W+ G I +++ + IDG++G I D + GRR +++L VE V+ + +
Sbjct: 386 SKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSSLQQVAE 444
Query: 380 WNTAFGLN--HSRTVEQMDKEKK----EKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNP 432
W GL HSR+ + + +N T VTS VL EPY+M K P
Sbjct: 445 WRDDVGLLPLHSRSYATSSRSASANSGDYSKNHTYIVTS-------VL--EEPYLMHKQP 495
Query: 433 ETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQ 484
GE GY DL M+AN+L Y+ L ++ YG+ N G W+G++GEL
Sbjct: 496 HYGEELVGNDRFEGYCKDLADMLANQLGIRYELRLVQDGNYGSENQYAPGGWDGMVGELV 555
Query: 485 EQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVY 544
+ AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++W+
Sbjct: 556 RKEADIAIAAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEIWMS 615
Query: 545 MATAYLGVSLLLFFLAR 561
+ +YLGVS++L+F+ R
Sbjct: 616 VIFSYLGVSIVLYFVTR 632
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM PIK+
Sbjct: 683 FWYSLAAFMQQGCDLTPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVSPIKSP 742
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA ++YG + G+T +FF+
Sbjct: 743 EDLAMQTDVQYGTLLHGATWDFFQ 766
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+++M M S+ P + V + EG+ RV KGKYA +ES EY CD
Sbjct: 766 QRSQIELHKKMWDYMNSN-PHLSVHAYDEGIRRVRTSKGKYALLVESPKNEYVNARSPCD 824
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P + K
Sbjct: 825 TMKVGRNIDAKGFGVATPIGSPIRK 849
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 671 EPYMM-KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+M K P GE GY DL M+AN+L Y+ L ++ YG+ N G
Sbjct: 487 EPYLMHKQPHYGEELVGNDRFEGYCKDLADMLANQLGIRYELRLVQDGNYGSENQYAPGG 546
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 547 WDGMVGEL 554
>gi|297710940|ref|XP_002832117.1| PREDICTED: glutamate receptor 3 isoform 1 [Pongo abelii]
gi|397505237|ref|XP_003823176.1| PREDICTED: glutamate receptor 3 isoform 1 [Pan paniscus]
gi|77416864|sp|P42263.2|GRIA3_HUMAN RecName: Full=Glutamate receptor 3; Short=GluR-3; AltName:
Full=AMPA-selective glutamate receptor 3; AltName:
Full=GluR-C; AltName: Full=GluR-K3; AltName:
Full=Glutamate receptor ionotropic, AMPA 3; Short=GluA3;
Flags: Precursor
gi|119632270|gb|EAX11865.1| glutamate receptor, ionotrophic, AMPA 3, isoform CRA_a [Homo
sapiens]
gi|119632272|gb|EAX11867.1| glutamate receptor, ionotrophic, AMPA 3, isoform CRA_a [Homo
sapiens]
Length = 894
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|109132167|ref|XP_001088327.1| PREDICTED: glutamate receptor 3 [Macaca mulatta]
Length = 894
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|345307482|ref|XP_003428582.1| PREDICTED: glutamate receptor 2 isoform 2 [Ornithorhynchus
anatinus]
Length = 883
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEIKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYEDSLVSKFVQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-EIPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + +T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDAETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|403279193|ref|XP_003931148.1| PREDICTED: glutamate receptor 3 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 824
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|380793109|gb|AFE68430.1| glutamate receptor 3 isoform 2 precursor, partial [Macaca mulatta]
Length = 800
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|195113049|ref|XP_002001082.1| GI22169 [Drosophila mojavensis]
gi|193917676|gb|EDW16543.1| GI22169 [Drosophila mojavensis]
Length = 894
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 281/568 (49%), Gaps = 55/568 (9%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N +E+ F+ A+ N++ + + + V D+ H+ +C GIA +F
Sbjct: 48 NTDEMNIVFDHAIDVANEEL-----GLAMTSLKAEVNYGDAYHSYGKLCRMLETGIAGVF 102
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ N G N++P +SK + +I
Sbjct: 103 GPSSRHTALHLMSICDAMDIPHIYSYMSENS--------EGFNLHPHPADLSKALYSLIT 154
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+W F +YE+ + L L ++ + P VT+ + + +Y+P+L+
Sbjct: 155 AFEWSRFIFLYESAEYLSILNEL-------NSLFGMNGPIVTVLRYDMQLNGNYKPVLRR 207
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ S ++ I++ S D L QA++V ++ + +YI+ + H+ D ++++
Sbjct: 208 VRKSKDNRIVVVGSTDTVPEFLNQAQQVGIINEDYSYIIGNLDF----HSFDLEEYKYSE 263
Query: 249 ANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLFAA 305
ANIT+ R+ + ++ +M G+ E+++ R S + +E AL YDAV LFA
Sbjct: 264 ANITSFRLFSSEKKAVKELMEKMGYTSEQDDFRNGSC-----PITVEMALTYDAVQLFAE 318
Query: 306 ALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFS 363
L++L KP+ S S G N M+++ + +TG I + R +
Sbjct: 319 TLRNL-PFKPVSQNCSQRTESVRDDGSSFKNYMRTLRLKDRLLTGPIYFEGNV--RKGYH 375
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFA 416
L+ +E +GTW+ R T Q D + N+T L+V +K +A
Sbjct: 376 LDVIELQPSGIVKVGTWSEERDFRPERLAATNSQFDN-IDNSLANKTFIILLSVPNKPYA 434
Query: 417 KLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
L E Y K E Y GY VDLI +A++L F + F N YG+ N + +
Sbjct: 435 SLV-----ESY--KQLEGNSQYEGYGVDLIMELADKLGFNFTFK-NGGNDYGSYNKTSNE 486
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
G++ E+ ADLA+ DLTITSER+ A++F++PFM LGI+IL+ KP K QP+LF+F++
Sbjct: 487 STGMLREIMHGYADLAVTDLTITSERQEAIEFSIPFMNLGIAILFLKPQKAQPELFTFMD 546
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW ++ ++LGVSL F L R+S
Sbjct: 547 PFSEEVWWFLGLSFLGVSLSFFILGRLS 574
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA WWFFTLI++SSYTANLAAFLT + I +V+DLA K G + YG
Sbjct: 618 KALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKR 676
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 677 TGSTRNFF 684
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
NS Y +M+ M + P ++N+EGV+RV K +YAF MEST IEY ++ C+L
Sbjct: 686 NSEDERYIKMNKFM-TEHPEYLTETNQEGVDRV-KVSTQYAFLMESTSIEYNTKRECNLK 743
Query: 634 QVGGLLDSKGYGIAM 648
++G LD KGYGIAM
Sbjct: 744 KIGDALDEKGYGIAM 758
>gi|56292|emb|CAA38466.1| glutamate receptor [Rattus norvegicus]
gi|202872|gb|AAA63480.1| AMPA selective glutamate receptor, partial [Rattus norvegicus]
Length = 888
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 285/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I +++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLSYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|395848889|ref|XP_003797074.1| PREDICTED: glutamate receptor 3 isoform 2 [Otolemur garnettii]
Length = 894
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|344286126|ref|XP_003414810.1| PREDICTED: glutamate receptor 3 isoform 1 [Loxodonta africana]
Length = 894
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|338729543|ref|XP_003365919.1| PREDICTED: glutamate receptor 3 isoform 2 [Equus caballus]
Length = 894
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|74008280|ref|XP_852016.1| PREDICTED: glutamate receptor 3 isoform 2 [Canis lupus familiaris]
gi|301782767|ref|XP_002926799.1| PREDICTED: glutamate receptor 3-like isoform 2 [Ailuropoda
melanoleuca]
gi|410989303|ref|XP_004000902.1| PREDICTED: glutamate receptor 3 isoform 1 [Felis catus]
Length = 894
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|344286128|ref|XP_003414811.1| PREDICTED: glutamate receptor 3 isoform 2 [Loxodonta africana]
Length = 894
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|149745557|ref|XP_001501048.1| PREDICTED: glutamate receptor 3 isoform 1 [Equus caballus]
Length = 894
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|395848887|ref|XP_003797073.1| PREDICTED: glutamate receptor 3 isoform 1 [Otolemur garnettii]
Length = 894
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|149060063|gb|EDM10879.1| glutamate receptor, ionotropic, AMPA3 (alpha 3), isoform CRA_b
[Rattus norvegicus]
Length = 888
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|109659116|gb|AAI17465.1| GRIA3 protein [Homo sapiens]
gi|313883848|gb|ADR83410.1| glutamate receptor, ionotrophic, AMPA 3 [synthetic construct]
Length = 824
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|121434|sp|P19492.1|GRIA3_RAT RecName: Full=Glutamate receptor 3; Short=GluR-3; AltName:
Full=AMPA-selective glutamate receptor 3; AltName:
Full=GluR-C; AltName: Full=GluR-K3; AltName:
Full=Glutamate receptor ionotropic, AMPA 3; Short=GluA3;
Flags: Precursor
gi|204398|gb|AAA41245.1| glutamate receptor (GluR-C), partial [Rattus norvegicus]
gi|5263285|gb|AAA41241.2| glutamate receptor subunit 3 [Rattus norvegicus]
Length = 888
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 285/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I +++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLSYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 790
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|311276904|ref|XP_003135405.1| PREDICTED: glutamate receptor 3-like isoform 3 [Sus scrofa]
Length = 824
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASAEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|163792203|ref|NP_116785.2| glutamate receptor 3 isoform 1 precursor [Rattus norvegicus]
Length = 888
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 790
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|395754406|ref|XP_003779770.1| PREDICTED: glutamate receptor 3 isoform 3 [Pongo abelii]
gi|397505241|ref|XP_003823178.1| PREDICTED: glutamate receptor 3 isoform 3 [Pan paniscus]
Length = 824
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|149412097|ref|XP_001509634.1| PREDICTED: glutamate receptor 2 isoform 1 [Ornithorhynchus
anatinus]
Length = 940
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEIKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYEDSLVSKFVQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-EIPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + +T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDAETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|332861579|ref|XP_003317713.1| PREDICTED: glutamate receptor 3 isoform 3 [Pan troglodytes]
Length = 824
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|74008282|ref|XP_864855.1| PREDICTED: glutamate receptor 3 isoform 9 [Canis lupus familiaris]
gi|301782765|ref|XP_002926798.1| PREDICTED: glutamate receptor 3-like isoform 1 [Ailuropoda
melanoleuca]
gi|410989305|ref|XP_004000903.1| PREDICTED: glutamate receptor 3 isoform 2 [Felis catus]
Length = 894
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|149060061|gb|EDM10877.1| glutamate receptor, ionotropic, AMPA3 (alpha 3), isoform CRA_a
[Rattus norvegicus]
gi|149060062|gb|EDM10878.1| glutamate receptor, ionotropic, AMPA3 (alpha 3), isoform CRA_a
[Rattus norvegicus]
Length = 888
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 790
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|163792205|ref|NP_001106213.1| glutamate receptor 3 isoform 2 precursor [Rattus norvegicus]
Length = 888
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 790
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|348508169|ref|XP_003441627.1| PREDICTED: glutamate receptor 4-like isoform 1 [Oreochromis
niloticus]
Length = 888
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 281/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 29 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C I V P+ PT G G I
Sbjct: 89 YSRGVFAIFGLYDKRSVNTLTSFCGALHISLV----TPS---FPTEG-EGQFTLQLRPSI 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 141 RGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNGWQV----SAICVESF--NEA 194
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++D ++ +IL+QA V H+ G +YI++ +
Sbjct: 195 AYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKG--YHYIIANLGF----KD 248
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K ++L YD
Sbjct: 249 ISLERFMHGGANVTGFQLVDFSKPIVIKLMQRWNKLDQ---REYPGSESPPKYTSSLTYD 305
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 306 GVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLTGNIQF 365
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S+ + +G WN L + + + +ENRT+ VT+
Sbjct: 366 D-HYGRRVNYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENALSNDS-SAMENRTVVVTT 423
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENT 465
+ +G PY+M + ELY GY VDL IA + YK + +
Sbjct: 424 --------IMEG-PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGK 473
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 533
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGIATPKGSQL-RNAVNLAVLKLNEQGLLDKLKN 790
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 672 PYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
PY+M + ELY GY VDL IA + YK + + YG +P+T WNG
Sbjct: 428 PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|195030675|ref|XP_001988193.1| GH11034 [Drosophila grimshawi]
gi|193904193|gb|EDW03060.1| GH11034 [Drosophila grimshawi]
Length = 907
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 292/580 (50%), Gaps = 55/580 (9%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF NE+E+ +F+ A R +N + K D+ PI +++ DS ++ C S G
Sbjct: 31 AIFYENEKEIELSFDHAFRVVN-NLKF--SDLQFIPIKRYMPTNDSFLLQQITCELISNG 87
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIP-TNGVHGVNVYPESHLISKG 123
+AAIFGP S +I+ + IPH+E W N VNV P ++S+
Sbjct: 88 VAAIFGPSSKAASDIVAQIANTTGIPHIEYDWKLEATRQEHLNHQMTVNVAPSLSVLSRA 147
Query: 124 ISVIIN-DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
II + +W TFT+IYET + L LQ ++ N H + + V +R L +D+
Sbjct: 148 YYDIIKFNYEWRTFTLIYETPEGLARLQDLM-NIHALNTDY------VKLRSLADYVEDF 200
Query: 183 RPLLKEIKNSSESH-ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDF 241
R L KE + H I+LDC +LK + + L G ++N+ L+ ++ H+
Sbjct: 201 RVLWKEADETFHEHRIILDCEPKSLKELLKISVDFKLQGPFRNWFLTH----LDTHSSGL 256
Query: 242 QDF--QPGYANITTVRM--INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D + ANIT+VR+ ++P NP+ R + R ++ + + L+Y
Sbjct: 257 KDIYNEDFKANITSVRLKLVDP-NPYER---------KKTRITKVDQILGSQMMLPILIY 306
Query: 298 DAVYLFA-AALQSLGERKPLPTPLS-CE--NPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
DAV LFA +A + + TP S C + S W G I + MK+I+ D + +
Sbjct: 307 DAVILFANSARNVIAYMQQFYTPNSHCGLGHGSPWIMGAYIVHEMKTISEDDVEPHFKTE 366
Query: 354 S----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
+ + G+R SF+LE + ++ L W +H V +++ E + I +
Sbjct: 367 NMKLNEYGQRTSFNLEIYKPTVNE--PLMVWTP----DHGIKVRRLNPELENSIPTPDFS 420
Query: 410 VTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
K + V EPY M +N E Y GY+VDLI+ ++ + F Y+F++
Sbjct: 421 TQRKVYTV--VTHHEEPYFMMKQDHENYRGQEKYEGYAVDLIRKLSELMEFDYEFMIVNG 478
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
N G NP+T +W+G+I +L + A + +CDLTIT RR+AVDFT+PFM LGISI++ K
Sbjct: 479 N--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQLRRSAVDFTVPFMQLGISIMHYKS 536
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
Q + F+FLEP + +VW+YM A L ++L +AR+S
Sbjct: 537 PPVQKNPFAFLEPFAPEVWIYMVFAQLVMTLAFVLIARLS 576
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR S M+ PS F +NKEGV+RV KEKG YAF ME+T + Y +E++CDL Q
Sbjct: 688 SNDTDYQRAWSQMKGFNPSAFTSNNKEGVDRVRKEKGSYAFLMETTSMTYNIERHCDLRQ 747
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+GG + K YG+A+P + + + L++ +GE Y +KN
Sbjct: 748 IGGQIGEKHYGLAVPLGADY-RTNLSVSILQLSEKGELYKLKN 789
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL +K+G + GST F
Sbjct: 625 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSTIKSLQDLLDQDEVKFGAMRGGSTSLF 684
Query: 819 F 819
F
Sbjct: 685 F 685
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 666 VLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 719
V EPY M +N E Y GY+VDLI+ ++ + F Y+F++ N G NP+T
Sbjct: 429 VTHHEEPYFMMKQDHENYRGQEKYEGYAVDLIRKLSELMEFDYEFMIVNGN--GKYNPET 486
Query: 720 GKWNGLIGEL 729
+W+G+I +L
Sbjct: 487 KQWDGIIRKL 496
>gi|395848891|ref|XP_003797075.1| PREDICTED: glutamate receptor 3 isoform 3 [Otolemur garnettii]
Length = 824
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|111598731|gb|AAH86678.1| Gria3 protein [Mus musculus]
Length = 888
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|354482737|ref|XP_003503553.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3-like
[Cricetulus griseus]
Length = 890
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 285/582 (48%), Gaps = 61/582 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT+ + + ++
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFVTPS---FPTDADXQMRPALKGAIL 146
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 147 S-----LLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----DIQ 196
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAH 237
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 197 EFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF----T 249
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALM 296
+ + G ANIT +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 250 DILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSALT 306
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 307 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 366
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR +++++ E + G WN + R V D++ ENRT
Sbjct: 367 QFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSENRT 420
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 421 IVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIV 471
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 472 GDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIK 531
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 573
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 688 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 747
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 748 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 792
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 623 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 682
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 683 TKEFFR 688
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 430 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 489
Query: 726 IGEL 729
+GEL
Sbjct: 490 VGEL 493
>gi|341940772|sp|Q9Z2W9.2|GRIA3_MOUSE RecName: Full=Glutamate receptor 3; Short=GluR-3; AltName:
Full=AMPA-selective glutamate receptor 3; AltName:
Full=GluR-C; AltName: Full=GluR-K3; AltName:
Full=Glutamate receptor ionotropic, AMPA 3; Short=GluA3;
Flags: Precursor
gi|125858930|gb|AAI29856.1| Gria3 protein [Mus musculus]
gi|148697088|gb|EDL29035.1| glutamate receptor, ionotropic, AMPA3 (alpha 3) [Mus musculus]
Length = 888
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|348511936|ref|XP_003443499.1| PREDICTED: glutamate receptor 2 isoform 1 [Oreochromis niloticus]
Length = 879
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 289/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFG------TSEFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG ++ N I S C HV +F P+ P +G H + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPLDGSHQFIIQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQIVLDTAAEKKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + I
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-I 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E S+ +G WN +++M K + N T
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKSNGPVKIGYWNE---------MDKMAVTKSDVFTNDTT 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GMENKTVIVTTIL--EAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M + PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMRGAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 781
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 612 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 671
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 672 TKEFFR 677
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|163792196|ref|NP_058582.3| glutamate receptor 3 precursor [Mus musculus]
gi|4163855|dbj|BAA37124.1| glutamate receptor channel alpha3 subunit [Mus musculus]
gi|19548742|gb|AAL90768.1| glutamate receptor subunit 3 [Mus musculus]
gi|19548744|gb|AAL90769.1| glutamate receptor subunit 3 [Mus musculus]
gi|68563410|dbj|BAE06153.1| AMPA-selective glutamate receptor 3 (GluR-3) flip [Mus musculus]
Length = 888
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 790
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|301611070|ref|XP_002935068.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like [Xenopus
(Silurana) tropicalis]
Length = 955
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/524 (29%), Positives = 268/524 (51%), Gaps = 46/524 (8%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYFIPTNGVHGV 111
TA+ MC +G+ + GP + + I ++C ++PH++ + F +
Sbjct: 75 TAETMCQILPKGVLGVLGPSYSPSSSSIISNICGEKEVPHIKVSTEEFLRF-QYQRFTTL 133
Query: 112 NVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVT 171
N++P + IS ++ ++ + T +I + L+ L+++L ++ + ++
Sbjct: 134 NLHPSNTDISAAVATLLRFFNSTTACLICAKAECLLNLEKLL-------RQFLISKDCLS 186
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
+R L DT D PLLKEI++ S I++ + + TIL +A E+ ++ Y YI +
Sbjct: 187 VRMLD-DTWDPTPLLKEIRDDKTSTIIVHANASMSHTILMKAAELGMVTAYYTYIFTNLE 245
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRAE 287
+ + D NI M N ++ + + ++ W EEN A
Sbjct: 246 FVLQRFESPLDD----RVNILGFSMFNQSHSYFKEFAHTLQQSW--EENCDHSPFTGPA- 298
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGM 346
+ AAL++DAVY +A+Q L + + PLSC + WQHG + N ++ + ++G+
Sbjct: 299 ---LSAALLFDAVYGIVSAVQELNRSQEIGVKPLSCGSSQIWQHGTSLMNYLRMVELEGL 355
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENR 406
TG + +S+ G+R+++ ++ ++Y ++ +G W+ GLN + K + + N+
Sbjct: 356 TGHVEFNSK-GQRSNYDMKIMQYTKTGFQEIGQWHVTNGLNMDK--RYFSKNASDTLVNK 412
Query: 407 TLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVL 460
TL VT+ PY+M EL G + VD++K +A L F YK L
Sbjct: 413 TLIVTT---------ILENPYLMLKANHQELEGNDRYEGFCVDMLKELAAILRFNYKIRL 463
Query: 461 ERENTYGTLNPQ-TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISIL
Sbjct: 464 VADGVYGV--PELNGTWTGMVGELISRKADLAVAGLTITAEREKVIDFSKPFMTLGISIL 521
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
YR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 522 YRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 565
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 666 IHGGSSMTF-FQNSRYQTYQRMWNYMHSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 722
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L QVGGLLD+KGYGI MP S F +F +L+
Sbjct: 723 NEYYRQRNCNLTQVGGLLDTKGYGIGMPVGSAFRDEFDLAILQLQ 767
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 606 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTTIEYGT 665
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 666 IHGGSSMTFFQ 676
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQ-TGKWNG 724
PY+M EL G + VD++K +A L F YK L + YG P+ G W G
Sbjct: 423 PYLMLKANHQELEGNDRYEGFCVDMLKELAAILRFNYKIRLVADGVYGV--PELNGTWTG 480
Query: 725 LIGEL 729
++GEL
Sbjct: 481 MVGEL 485
>gi|195576779|ref|XP_002078251.1| GD23352 [Drosophila simulans]
gi|194190260|gb|EDX03836.1| GD23352 [Drosophila simulans]
Length = 907
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 293/590 (49%), Gaps = 77/590 (13%)
Query: 5 GIFGPNEEEVATAFEIAVRRINK-DFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
IF NE+E+ +F+ A R +N F L I +++ DS ++ C S
Sbjct: 36 AIFYENEKEIELSFDQAFREVNNMKFSELR----FVTIKRYMPTNDSFLLQQITCELISN 91
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI---PTNGVHGVNVYPESHLI 120
G+AAIFGP S +I+ + IPH+E +D N VNV P ++
Sbjct: 92 GVAAIFGPSSKAASDIVAQIANATGIPHIE--YDLKLEATRQEQLNHQMSVNVAPSLSVL 149
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLE-NAHDDDKEIRPGRPSVTIRQLPPD 178
S+ +I ++ +W TFT+IYET + L LQ ++ A + D V +R L
Sbjct: 150 SRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSD--------YVKLRNLADY 201
Query: 179 TDDYRPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L KE + E I+LDC +LK + + L G ++N+ L+ L ++
Sbjct: 202 ADDYRILWKETDETFHEQRIILDCEPKTLKELLKVSIDFKLQGPFRNWFLTHLDTHNSGL 261
Query: 237 HTVDFQDFQPGYANITTVRM-INPTNPHIRSIMNGWIYEENERGRSLNVRAETV----KI 291
+ +DF+ ANIT+VR+ + NP ER ++ + + + +
Sbjct: 262 RDIYNEDFK---ANITSVRLKVVDANPF-------------ERKKTRLTKVDQILGNQTM 305
Query: 292 EAALMYDAVYLFAAALQS-LGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM--- 346
L+YDAV LFA++ ++ + +P P C +PS W G I N MK+I+ D +
Sbjct: 306 LPILIYDAVVLFASSARNVIAAMQPFHPPNRHCGSPSPWMLGAFIVNEMKTISEDDVEPH 365
Query: 347 --TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
T + LD + G+R F+LE + ++ + W G+ R +++
Sbjct: 366 FKTENMKLD-ENGQRIHFNLEIYKPTVNE--PMMVWTPDNGIKKRRLNLELESAG----- 417
Query: 405 NRTLTVTSKTFAKLRVLFQ-----GEPYMM-----KNPETGELY-GYSVDLIKMIANELN 453
T++ F++ R ++ EPY M +N E Y GY+VDLI ++ L
Sbjct: 418 ------TTQDFSEQRKVYTVVTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELLE 471
Query: 454 FTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMT 513
F Y+F++ N G NP+T +W+G+I +L + A + +CDLTIT RR+ VDFT+PFM
Sbjct: 472 FDYEFMIVNGN--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQLRRSVVDFTVPFMQ 529
Query: 514 LGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LGISIL+ K + + F+FLEP + +VW+YM A L ++L F+AR+S
Sbjct: 530 LGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLS 579
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV RV KEKG YAF ME+T + Y +E+NCDL Q
Sbjct: 691 SNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQ 750
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P S + S +L +GE MKN
Sbjct: 751 IGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSE--RGELQKMKN 792
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL + ++ +G + GST F
Sbjct: 628 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLF 687
Query: 819 F 819
F
Sbjct: 688 F 688
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 671 EPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M +N E Y GY+VDLI ++ L F Y+F++ N G NP+T +W+G
Sbjct: 437 EPYFMMKEDHENFRGREKYEGYAVDLISKLSELLEFDYEFMIVNGN--GKYNPETKQWDG 494
Query: 725 LIGEL 729
+I +L
Sbjct: 495 IIRKL 499
>gi|338729546|ref|XP_003365920.1| PREDICTED: glutamate receptor 3 isoform 3 [Equus caballus]
Length = 824
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|281353988|gb|EFB29572.1| hypothetical protein PANDA_016495 [Ailuropoda melanoleuca]
Length = 859
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 283/582 (48%), Gaps = 61/582 (10%)
Query: 3 IVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATS 62
I G+F N + +AF AV+ N + L V H+++ +S C+ S
Sbjct: 1 IGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFS 60
Query: 63 EGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESHLI 120
G+ AIFG + N + S C V + D + F+ + + P +
Sbjct: 61 RGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA---L 110
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 111 KGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----DVQ 165
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAH 237
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 166 EFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF----T 218
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALM 296
+ + G ANIT +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 219 DILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSALT 275
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 276 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 335
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR +++++ E + G WN + R V D++ ENRT
Sbjct: 336 QFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSENRT 389
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 390 IVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIV 440
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 441 GDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIK 500
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 501 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 542
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 657 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 716
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 717 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 761
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 592 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 651
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 652 TKEFFR 657
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 399 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 458
Query: 726 IGEL 729
+GEL
Sbjct: 459 VGEL 462
>gi|441675020|ref|XP_003262338.2| PREDICTED: glutamate receptor 3 [Nomascus leucogenys]
Length = 878
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 282/580 (48%), Gaps = 61/580 (10%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F N + +AF AV+ N + L V H+++ +S C+ S G
Sbjct: 22 GLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRG 81
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESHLISK 122
+ AIFG + N + S C V + D + F+ + + P +
Sbjct: 82 VYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA---LKG 131
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDY 182
I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D ++
Sbjct: 132 AILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----DVQEF 186
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAHTV 239
R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ + +
Sbjct: 187 RRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF----TDI 239
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYD 298
+ G ANIT +++N NP ++ + W+ +E E + N +K +AL +D
Sbjct: 240 LLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSALTHD 296
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 297 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQF 356
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRTLT 409
D+ GRR +++++ E + G WN + R V D++ ENRT+
Sbjct: 357 DTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSENRTIV 410
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ PY+M KN E E Y GY VDL IA + YK + +
Sbjct: 411 VTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGD 461
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 462 GKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 521
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 522 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 676 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 735
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 736 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 780
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 611 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 670
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 671 TKEFFR 676
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 418 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|355705126|gb|EHH31051.1| Glutamate receptor 3, partial [Macaca mulatta]
Length = 700
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDT-YGRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFKV 821
T+ FF+V
Sbjct: 687 TKEFFRV 693
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|348508177|ref|XP_003441631.1| PREDICTED: glutamate receptor 4-like isoform 5 [Oreochromis
niloticus]
Length = 889
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 281/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 30 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 89
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C I V P+ PT G G I
Sbjct: 90 YSRGVFAIFGLYDKRSVNTLTSFCGALHISLV----TPS---FPTEG-EGQFTLQLRPSI 141
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 142 RGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNGWQVS----AICVESF--NEA 195
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++D ++ +IL+QA V H+ G +YI++ +
Sbjct: 196 AYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKG--YHYIIANLGF----KD 249
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K ++L YD
Sbjct: 250 ISLERFMHGGANVTGFQLVDFSKPIVIKLMQRWNKLDQ---REYPGSESPPKYTSSLTYD 306
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 307 GVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLTGNIQF 366
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S+ + +G WN L + + + +ENRT+ VT+
Sbjct: 367 D-HYGRRVNYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENALSNDS-SAMENRTVVVTT 424
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENT 465
+ +G PY+M + ELY GY VDL IA + YK + +
Sbjct: 425 --------IMEG-PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGK 474
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 475 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 534
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 687 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 746
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 747 TMKVGGNLDSKGYGIATP 764
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 622 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 681
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 682 TKEFFR 687
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 672 PYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
PY+M + ELY GY VDL IA + YK + + YG +P+T WNG
Sbjct: 429 PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNG 487
Query: 725 LIGEL 729
++GEL
Sbjct: 488 MVGEL 492
>gi|348511940|ref|XP_003443501.1| PREDICTED: glutamate receptor 2 isoform 3 [Oreochromis niloticus]
Length = 879
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 289/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFG------TSEFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG ++ N I S C HV +F P+ P +G H + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPLDGSHQFIIQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQIVLDTAAEKKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + I
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-I 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E S+ +G WN +++M K + N T
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKSNGPVKIGYWNE---------MDKMAVTKSDVFTNDTT 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GMENKTVIVTTIL--EAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M + PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMRGAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 781
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 612 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 671
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 672 TKEFFR 677
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|348511938|ref|XP_003443500.1| PREDICTED: glutamate receptor 2 isoform 2 [Oreochromis niloticus]
Length = 897
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 289/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFG------TSEFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG ++ N I S C HV +F P+ P +G H + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPLDGSHQFIIQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQIVLDTAAEKKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + I
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-I 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E S+ +G WN +++M K + N T
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKSNGPVKIGYWNE---------MDKMAVTKSDVFTNDTT 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GMENKTVIVTTIL--EAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M + PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMRGAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 781
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 727 GELQEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTAN 779
G++Q T S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTAN
Sbjct: 577 GQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 636
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LAAFLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 637 LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFR 677
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|38198631|ref|NP_938153.1| glutamate receptor, ionotropic, AMPA 3a precursor [Danio rerio]
gi|33327160|gb|AAQ08958.1| AMPA receptor subunit GluR3A [Danio rerio]
Length = 886
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 280/577 (48%), Gaps = 47/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNITEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT+ + L
Sbjct: 87 FSRGVYAIFGFYDRRSMNTLTSFCGALHT----SFITPS---FPTDTDVQFVLQMRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S++ + W+ F +Y+T LQ ++E+A ++ + VT R + D
Sbjct: 140 GALLSLLAH-YKWEKFVYLYDTDRGFSILQAIMESAVMNNWQ-------VTARSVGNIVD 191
Query: 181 --DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+YR +++E+ E L+DC +++ +IL+Q +YIL+ +
Sbjct: 192 PLEYRRIIEEMDRRQEKRFLIDCEVERINSILEQVVIAGKNSRGYHYILANLGF----TN 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ PG ANIT ++INP +P ++ + E + R+ +K +AL +D
Sbjct: 248 MSLDKVFPGGANITGFQIINPDSPIVQQFLQR--RERLDEREFPESRSSPLKYTSALTHD 305
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 306 AILVIAEAFRYLRRQRVDISRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQF 365
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
DS GRR++++++ E + +G WN + VEQ + +ENRT+ VT+
Sbjct: 366 DS-FGRRSNYTVDVYEMKPGGARKIGYWNEFEKFVY--IVEQQVTNESSSVENRTIVVTT 422
Query: 413 KTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M E + Y GY VDL IA + YK + + Y
Sbjct: 423 IMEA---------PYVMYKRNYMQLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVADGKY 473
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 GARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 533
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSAL-RTPVSLAVLKLSEQGILDKLKN 788
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVADGKYGARDPETKTWNGMVGEL 490
>gi|297591818|ref|NP_001172053.1| glutamate receptor 2 isoform 2 precursor [Taeniopygia guttata]
Length = 883
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 63/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIA-VRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + V+ +F+ L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQYSTSEFR-------LTPHIDNLEVANSFAVTNAFCS 79
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHL 119
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 80 QFSRGVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDL 132
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
+S +I W F +Y++ L L+ VL++A + ++ ++ + + +
Sbjct: 133 KGALLS-LIEYYQWTKFAYLYDSDRGLSTLRAVLDSAAEKKWQV----TAINVGNINNER 187
Query: 180 DD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWIN 235
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 188 KDETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF--- 242
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAA 294
D Q G AN++ ++++ +P + + W EE E T+K +A
Sbjct: 243 -TDGDLSKIQFGGANVSGFQIVDYDDPVVSKFIQRWSTLEEKEYP---GAHTSTIKYTSA 298
Query: 295 LMYDAVYLFAAALQSLGERKP----LPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 299 LTYDAVQVMTEAFRNLRKQRIEISIRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTG 358
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIEN 405
I D Q G+R +F++ +E S + +G W+ V +D +EN
Sbjct: 359 NIKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNGSSGLEN 413
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFV 459
+T+ T+ PY+M KN E E GY VDL IA F YK
Sbjct: 414 KTIIATT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLT 464
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG + T WNG++GEL +AD+AI LTITS R +DF+ PFM+LGISI+
Sbjct: 465 IVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITSVREEVIDFSKPFMSLGISIM 524
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|432898504|ref|XP_004076534.1| PREDICTED: glutamate receptor 3-like isoform 2 [Oryzias latipes]
Length = 886
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 282/580 (48%), Gaps = 53/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C +F P+ + I T+ + + P +
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHT----SFITPS-FPIDTDVQFVIQMRPS---L 138
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP--D 178
+ +++ W+ F +Y+T LQ ++E+A ++ + VT R + D
Sbjct: 139 RGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ-------VTARSVGSIVD 191
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+YR +++E+ E L+DC +++ IL++ +YIL+ +
Sbjct: 192 PTEYRRIIEEMDRRQEKRFLIDCEVERINLILQEVVTSGKNSRGYHYILANLGF----SN 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANIT ++INP + ++ + W E + + +K +AL +D
Sbjct: 248 VSLDRVFSGGANITGFQIINPDSTVVQQFLQRW--ERLDEREFPEAKNTPLKYTSALTHD 305
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 306 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQF 365
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRTLT 409
D+ GRR ++S++ E + +G WN + + V MD++ + +ENRT+
Sbjct: 366 DT-FGRRANYSIDVYEMKPAGPRRIGYWN-----EYEKFVYIMDQQVTNESSSVENRTIV 419
Query: 410 VTSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 420 VTTIMEA---------PYVMYKKNFMQLEGNDRYEGYCVDLASEIAKHVGIRYKLSVVPD 470
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 471 GKYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 530
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 788
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI+ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIEGAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIRYKLSVVPDGKYGARDPETKTWNGMVGEL 490
>gi|348508173|ref|XP_003441629.1| PREDICTED: glutamate receptor 4-like isoform 3 [Oreochromis
niloticus]
Length = 889
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 281/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 30 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 89
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C I V P+ PT G G I
Sbjct: 90 YSRGVFAIFGLYDKRSVNTLTSFCGALHISLV----TPS---FPTEG-EGQFTLQLRPSI 141
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 142 RGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNGWQV----SAICVESF--NEA 195
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++D ++ +IL+QA V H+ G +YI++ +
Sbjct: 196 AYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKG--YHYIIANLGF----KD 249
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K ++L YD
Sbjct: 250 ISLERFMHGGANVTGFQLVDFSKPIVIKLMQRWNKLDQ---REYPGSESPPKYTSSLTYD 306
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 307 GVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLTGNIQF 366
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S+ + +G WN L + + + +ENRT+ VT+
Sbjct: 367 D-HYGRRVNYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENALSNDS-SAMENRTVVVTT 424
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENT 465
+ +G PY+M + ELY GY VDL IA + YK + +
Sbjct: 425 --------IMEG-PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGK 474
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 475 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 534
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 687 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 746
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 747 TMKVGGNLDSKGYGIATPKGSQL-RNAVNLAVLKLNEQGLLDKLKN 791
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 622 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 681
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 682 TKEFFR 687
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 672 PYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
PY+M + ELY GY VDL IA + YK + + YG +P+T WNG
Sbjct: 429 PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNG 487
Query: 725 LIGEL 729
++GEL
Sbjct: 488 MVGEL 492
>gi|348508175|ref|XP_003441630.1| PREDICTED: glutamate receptor 4-like isoform 4 [Oreochromis
niloticus]
Length = 907
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 281/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 29 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C I V P+ PT G G I
Sbjct: 89 YSRGVFAIFGLYDKRSVNTLTSFCGALHISLV----TPS---FPTEG-EGQFTLQLRPSI 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 141 RGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNGWQVS----AICVESF--NEA 194
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++D ++ +IL+QA V H+ G +YI++ +
Sbjct: 195 AYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKG--YHYIIANLGF----KD 248
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K ++L YD
Sbjct: 249 ISLERFMHGGANVTGFQLVDFSKPIVIKLMQRWNKLDQ---REYPGSESPPKYTSSLTYD 305
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 306 GVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLTGNIQF 365
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S+ + +G WN L + + + +ENRT+ VT+
Sbjct: 366 D-HYGRRVNYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENALSNDS-SAMENRTVVVTT 423
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENT 465
+ +G PY+M + ELY GY VDL IA + YK + +
Sbjct: 424 --------IMEG-PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGK 473
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 533
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 746 TMKVGGNLDSKGYGIATP 763
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 672 PYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
PY+M + ELY GY VDL IA + YK + + YG +P+T WNG
Sbjct: 428 PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|189528917|ref|XP_684512.3| PREDICTED: glutamate receptor, ionotropic kainate 4 [Danio rerio]
Length = 961
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 270/524 (51%), Gaps = 46/524 (8%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHG 110
T + MC S+G+ A+ GP + N II ++C ++P+V+ A D K P
Sbjct: 75 TGETMCQIMSKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPEDILKVQFPR--FTT 132
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+++ P + IS ++ ++ + T +I D L+ L+ +L ++ + ++
Sbjct: 133 LDLRPTNTDISMAVAGLLTFFNSSTSCLICAQADCLLNLEVLL-------RQFLISKETL 185
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D+ D PLLKEI++ + I++D + + IL++A E+ ++ Y YIL+
Sbjct: 186 SVRMLD-DSQDPTPLLKEIRDDKTATIIVDANATMSHVILERASELGMLSVYYTYILTSL 244
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRA 286
+ + + D NI + N T+P + S+ W +EN +
Sbjct: 245 EFSL----LRLDDLADQRVNIVGFSVFNRTHPFFQDFVLSLNRSW--QEN----CDHAPF 294
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAV+ AA+Q L + + T LSC++ W+HG + N ++ + ++G
Sbjct: 295 AGTPLSSALLFDAVHTVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEG 354
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L ++ D + +G W++ GL+ R K+ +
Sbjct: 355 LTGHIEFNSK-GQRSNYALRIMQNSRDGLRQIGQWHSEQGLSMER-----------KLPS 402
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
+T T PY+M EL G + VD++K +A+ L F Y+
Sbjct: 403 LNVTDTLFNTTLTITTILENPYVMLRANHQELEGNDRYEGFCVDMLKELADILKFKYRIR 462
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
L + YG G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI+
Sbjct: 463 LVGDGVYGVPGAN-GTWTGMVGELISRKADLAVAALTITAEREKVIDFSKPFMTLGISIM 521
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
YR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 522 YRVHIGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 565
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+NS YQRM + M S +PSVFVKS +EG+ RV+ YA+ +EST EY ++NC+L
Sbjct: 676 QNSRYQTYQRMWNFMYSKQPSVFVKSTEEGIARVLNSN--YAYLLESTMNEYYRQRNCNL 733
Query: 633 MQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRV 666
Q+GGLLD+KGYGI MP + + F A LR+
Sbjct: 734 TQIGGLLDTKGYGIGMPLGS-VYRDEFDLAILRL 766
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 606 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 665
Query: 810 VEMGSTRNFFK 820
+ GST FF+
Sbjct: 666 MHGGSTMTFFQ 676
>gi|190336889|gb|AAI62620.1| Glutamate receptor, ionotropic, AMPA 4b [Danio rerio]
Length = 904
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/578 (27%), Positives = 282/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG + + + S C I + P+ PT G + + P
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCGALHISLIT----PS---FPTEGESQFVLQLRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +++ DW+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 138 -IRGALLSLLDHYDWNRFVFLYDTDRGYSILQAIMEKAGQNGWQVS----AICVENF--N 190
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
YR LL+++ E ++D ++ +L+Q V H+ G +YI++ +
Sbjct: 191 DASYRQLLEDLDRRQEKTFVIDLEAERLNNMLEQIVSVGKHVKG--YHYIMANLGF---- 244
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
++ + F G AN+T ++++ +NP + +M W + R K +AL
Sbjct: 245 KDINLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDAPPKYTSALT 301
Query: 297 YDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A ++L R+ + + W G+ + +K + + G+TG +
Sbjct: 302 YDGVMVMAEAFRNLRRQKVDISRRGIAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNV 361
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D GRR +++++ E S+ + +G WN A L ++ + E +ENRT+ V
Sbjct: 362 QFD-HYGRRVNYTMDVFELKSNGPRRIGYWNDADKLVLTQDHALLPNET-SGMENRTVIV 419
Query: 411 TSKTFAKLRVLFQGEPYMMKNP----ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
T+ + +G M+K E E Y GY VDL IA + F YK + +
Sbjct: 420 TT--------IMEGPYVMLKKNWEMYEGNEQYEGYCVDLASEIAKHIGFKYKISIVPDGK 471
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 531
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 683 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 742
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYG+A P L
Sbjct: 743 TMKVGGNLDSKGYGVATPKGSQLG 766
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 617 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDSG 676
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 677 STKEFFR 683
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M E E Y GY VDL IA + F YK + + YG +P+T WNG+
Sbjct: 426 PYVMLKKNWEMYEGNEQYEGYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|115529244|ref|NP_001070157.1| glutamate receptor 2 isoform 1 precursor [Taeniopygia guttata]
gi|23491752|dbj|BAC19820.1| AMPA GluR2 [Taeniopygia guttata]
Length = 883
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 63/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIA-VRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + V+ +F+ L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQYSTSEFR-------LTPHIDNLEVANSFAVTNAFCS 79
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHL 119
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 80 QFSRGVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDL 132
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
+S +I W F +Y++ L L+ VL++A + ++ ++ + + +
Sbjct: 133 KGALLS-LIEYYQWTKFAYLYDSDRGLSTLRAVLDSAAEKKWQV----TAINVGNINNER 187
Query: 180 DD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWIN 235
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 188 KDETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF--- 242
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAA 294
D Q G AN++ ++++ +P + + W EE E T+K +A
Sbjct: 243 -TDGDLSKIQFGGANVSGFQIVDYDDPVVSKFIQRWSTLEEKEYP---GAHTSTIKYTSA 298
Query: 295 LMYDAVYLFAAALQSLGERKP----LPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 299 LTYDAVQVMTEAFRNLRKQRIEISIRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTG 358
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIEN 405
I D Q G+R +F++ +E S + +G W+ V +D +EN
Sbjct: 359 NIKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNGSSGLEN 413
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFV 459
+T+ T+ PY+M KN E E GY VDL IA F YK
Sbjct: 414 KTIIATT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLT 464
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG + T WNG++GEL +AD+AI LTITS R +DF+ PFM+LGISI+
Sbjct: 465 IVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITSVREEVIDFSKPFMSLGISIM 524
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGVATPKGSSLGT-PVNLAVLKLSEQGVLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|338713115|ref|XP_003362829.1| PREDICTED: glutamate receptor 1 [Equus caballus]
gi|397517667|ref|XP_003829029.1| PREDICTED: glutamate receptor 1 isoform 7 [Pan paniscus]
gi|410039924|ref|XP_003950712.1| PREDICTED: glutamate receptor 1 [Pan troglodytes]
gi|221039768|dbj|BAH11647.1| unnamed protein product [Homo sapiens]
Length = 716
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 262/522 (50%), Gaps = 45/522 (8%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
+++C+ S+G+ AIFG N++ S C + F P+ + + T+ + +
Sbjct: 26 QIVCSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLR 80
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
PE + + II+ W F IY+ L LQ+VL+ A + + ++ +
Sbjct: 81 PE---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNI 131
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L + YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 132 LTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF-- 189
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEA 293
+D F+ AN+T +++N T+ IM W +N R V + K +
Sbjct: 190 --MDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTS 244
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YD V + A A QSL ++ C NP+ W G+ I ++ + +G+T
Sbjct: 245 ALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLT 304
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + + + GRR +++L +E D + +G WN + T Q + ++NRT
Sbjct: 305 GNVQFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRT 362
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLE 461
VT+ +PY+M KN E + Y GY V+L IA + ++Y+ +
Sbjct: 363 YIVTT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIV 413
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 414 SDGKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIK 473
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 474 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 515
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 563 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 622
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 623 TKEFFR 628
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 628 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 687
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 688 TMKVGGNLDSKGYGIATPKGSAL 710
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 371 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 430
Query: 725 LIGEL 729
++GEL
Sbjct: 431 MVGEL 435
>gi|55728780|emb|CAH91129.1| hypothetical protein [Pongo abelii]
Length = 627
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 56/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQKQSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C +F P+ PT V +
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFVTPS---FPTENADVQFVIQMRPAL 146
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 147 KGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----DVQ 201
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAH 237
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 202 EFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF----T 254
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALM 296
+ + G ANIT +++N NP ++ + W+ +E E + N +K +AL
Sbjct: 255 DILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSALT 311
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 312 HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNI 371
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRT 407
D+ GRR +++++ + G WN + R V D++ ENRT
Sbjct: 372 QFDT-YGRRTNYTIDVYGMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSENRT 425
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E Y GY VDL IA + YK +
Sbjct: 426 IVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIV 476
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 477 GDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIK 536
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 537 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 578
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 435 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 494
Query: 726 IGEL 729
+GEL
Sbjct: 495 VGEL 498
>gi|345799496|ref|XP_003434570.1| PREDICTED: glutamate receptor 1 [Canis lupus familiaris]
Length = 716
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 262/522 (50%), Gaps = 45/522 (8%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
+++C+ S+G+ AIFG N++ S C + F P+ + + T+ + +
Sbjct: 26 QIVCSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLR 80
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
PE + + II+ W F IY+ L LQ+VL+ A + + ++ +
Sbjct: 81 PE---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNI 131
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L + YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 132 LTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF-- 189
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEA 293
+D F+ AN+T +++N T+ IM W +N R V + K +
Sbjct: 190 --MDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTS 244
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YD V + A A QSL ++ C NP+ W G+ I ++ + +G+T
Sbjct: 245 ALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLT 304
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + + + GRR +++L +E D + +G WN + T Q + ++NRT
Sbjct: 305 GNVQFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRT 362
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLE 461
VT+ +PY+M KN E + Y GY V+L IA + ++Y+ +
Sbjct: 363 YIVTT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIV 413
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 414 SDGKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIK 473
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 474 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 515
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 563 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 622
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 623 TKEFFR 628
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 628 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 687
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 688 TMKVGGNLDSKGYGIATPKGSAL 710
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 371 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 430
Query: 725 LIGEL 729
++GEL
Sbjct: 431 MVGEL 435
>gi|261278072|dbj|BAI44622.1| AMPA-selective glutamate receptor 3 short type [Mus musculus]
Length = 774
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYG+A P L
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALG 769
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|16033402|gb|AAL13229.1|AF361751_1 AMPA receptor subunit 2b [Danio rerio]
Length = 897
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 290/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFG------TAEFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N I S C + + + D N+ FI + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGNQQFI-------IQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + + +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAEKKWQV----TAINVGNMKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + +
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-V 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLS----C-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ + + C NP+ W G+ I +K + +DG+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDISRRANNGDCLANPAVPWAQGVEIERALKQVRVDGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++++ +E S+ +G WN V++M K + N T+
Sbjct: 357 NIQFD-QYGKRVNYTVHVMELKSNGAVKIGYWNE---------VDKMVVTKSDLFPNDTM 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GLENKTVIVTTIL--EAPYVMLKKNADLFMDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M+ + PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMKGAEPSVFVKTTAEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 781
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GST+ F
Sbjct: 616 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEF 675
Query: 819 FK 820
F+
Sbjct: 676 FR 677
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFMDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|432898502|ref|XP_004076533.1| PREDICTED: glutamate receptor 3-like isoform 1 [Oryzias latipes]
Length = 886
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 282/580 (48%), Gaps = 53/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N + S C +F P+ + I T+ + + P +
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHT----SFITPS-FPIDTDVQFVIQMRPS---L 138
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP--D 178
+ +++ W+ F +Y+T LQ ++E+A ++ + VT R + D
Sbjct: 139 RGAVLSLLDHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ-------VTARSVGSIVD 191
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
+YR +++E+ E L+DC +++ IL++ +YIL+ +
Sbjct: 192 PTEYRRIIEEMDRRQEKRFLIDCEVERINLILQEVVTSGKNSRGYHYILANLGF----SN 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
V G ANIT ++INP + ++ + W E + + +K +AL +D
Sbjct: 248 VSLDRVFSGGANITGFQIINPDSTVVQQFLQRW--ERLDEREFPEAKNTPLKYTSALTHD 305
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINL 352
A+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I
Sbjct: 306 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQF 365
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRTLT 409
D+ GRR ++S++ E + +G WN + + V MD++ + +ENRT+
Sbjct: 366 DT-FGRRANYSIDVYEMKPAGPRRIGYWN-----EYEKFVYIMDQQVTNESSSVENRTIV 419
Query: 410 VTSKTFAKLRVLFQGEPYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ A PY+M E + Y GY VDL IA + YK + +
Sbjct: 420 VTTIMEA---------PYVMYKKNFMQLEGNDRYEGYCVDLASEIAKHVGIRYKLSVVPD 470
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 471 GKYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 530
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVFVK+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 788
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI+ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIEGAEDLAKQTEIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 446 GYCVDLASEIAKHVGIRYKLSVVPDGKYGARDPETKTWNGMVGEL 490
>gi|345808007|ref|XP_549231.3| PREDICTED: glutamate receptor 3 isoform 1 [Canis lupus familiaris]
Length = 824
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 285/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E KV G+ + + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEM-----KVTGSRKAGYWNEYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|60360568|dbj|BAD90527.1| mKIAA4184 protein [Mus musculus]
Length = 905
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 45 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 104
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 105 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 155
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 156 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 209
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 210 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 263
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 264 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYISA 319
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 320 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 379
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 380 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 433
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 434 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 484
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 485 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 544
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 545 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 588
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 703 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 762
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 763 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 807
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 638 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 697
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 698 TKEFFR 703
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 445 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 504
Query: 726 IGEL 729
+GEL
Sbjct: 505 VGEL 508
>gi|403285591|ref|XP_003934104.1| PREDICTED: glutamate receptor 1 isoform 5 [Saimiri boliviensis
boliviensis]
Length = 716
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 262/522 (50%), Gaps = 45/522 (8%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
+++C+ S+G+ AIFG N++ S C + F P+ + + T+ + +
Sbjct: 26 QIVCSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLR 80
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
PE + + II+ W F IY+ L LQ+VL+ A + + ++ +
Sbjct: 81 PE---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNI 131
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L + YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 132 LTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF-- 189
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEA 293
+D F+ AN+T +++N T+ IM W +N R V + K +
Sbjct: 190 --MDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTS 244
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YD V + A A QSL ++ C NP+ W G+ I ++ + +G+T
Sbjct: 245 ALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLT 304
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + + + GRR +++L +E D + +G WN + T Q + ++NRT
Sbjct: 305 GNVQFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRT 362
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLE 461
VT+ +PY+M KN E + Y GY V+L IA + ++Y+ +
Sbjct: 363 YIVTT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIV 413
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +
Sbjct: 414 SDGKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIK 473
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 474 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 515
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 563 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 622
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 623 TKEFFR 628
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 628 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 687
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 688 TMKVGGNLDSKGYGIATPKGSAL 710
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 371 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 430
Query: 725 LIGEL 729
++GEL
Sbjct: 431 MVGEL 435
>gi|348508171|ref|XP_003441628.1| PREDICTED: glutamate receptor 4-like isoform 2 [Oreochromis
niloticus]
Length = 907
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 281/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 29 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 88
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + N + S C I V P+ PT G G I
Sbjct: 89 YSRGVFAIFGLYDKRSVNTLTSFCGALHISLV----TPS---FPTEG-EGQFTLQLRPSI 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 141 RGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNGWQVS----AICVESF--NEA 194
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++D ++ +IL+QA V H+ G +YI++ +
Sbjct: 195 AYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKG--YHYIIANLGF----KD 248
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K ++L YD
Sbjct: 249 ISLERFMHGGANVTGFQLVDFSKPIVIKLMQRWNKLDQ---REYPGSESPPKYTSSLTYD 305
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 306 GVLVMAEAFRTLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERALKQVRIQGLTGNIQF 365
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S+ + +G WN L + + + +ENRT+ VT+
Sbjct: 366 D-HYGRRVNYTMDVFELKSNGPRKIGYWNDIDKLVLVQNENALSNDS-SAMENRTVVVTT 423
Query: 413 KTFAKLRVLFQGEPYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENT 465
+ +G PY+M + ELY GY VDL IA + YK + +
Sbjct: 424 --------IMEG-PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGK 473
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 533
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGIATPKGSQL-RNAVNLAVLKLNEQGLLDKLKN 790
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 672 PYMMKNPETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
PY+M + ELY GY VDL IA + YK + + YG +P+T WNG
Sbjct: 428 PYVMLK-KNWELYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNG 486
Query: 725 LIGEL 729
++GEL
Sbjct: 487 MVGEL 491
>gi|170040912|ref|XP_001848226.1| ionotropic glutamate receptor subunit ia [Culex quinquefasciatus]
gi|167864526|gb|EDS27909.1| ionotropic glutamate receptor subunit ia [Culex quinquefasciatus]
Length = 916
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 177/286 (61%), Gaps = 19/286 (6%)
Query: 288 TVKIEAALMYDAVYLFAAALQSL---GERKPL-PTPLSCENPSSWQHGLGIGNLMKSITI 343
T+++E ALMYDAV LFA AL+ L PL P L CE+ ++W++G I N MK+ TI
Sbjct: 210 TMRVETALMYDAVLLFAEALRHLIGIDPPHPLEPIALKCEDDNTWKNGYSIINYMKASTI 269
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
G+T + D + G R+ F L+ VE + +G WN+ GLN +R K++ +
Sbjct: 270 HGLTRGVKFDHE-GHRSDFLLDIVELGPAGLEKVGVWNSTEGLNFTR------KKELTAL 322
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPY-MMKNPET-----GELYGYSVDLIKMIANELNFTYK 457
T+ ++TF L + PY M+K+ T G+ VDLI ++ L F Y
Sbjct: 323 ALDDGTLQNRTFIVLTAI--SPPYGMLKDSPTKLTGNDRFEGFGVDLIHELSLMLGFNYT 380
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
FVL+ + YG+LN +TGKWNG++ EL E RADLAI DLTITS+R +AVDFTMPFM LGIS
Sbjct: 381 FVLQEDGVYGSLNRETGKWNGMVNELLEWRADLAITDLTITSDRESAVDFTMPFMNLGIS 440
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
IL+RKP K+ P LFSF+ P S VW+Y+ AY+ VS+ LF L R+S
Sbjct: 441 ILFRKPTKEPPSLFSFMSPFSKQVWLYLGGAYMMVSMSLFILGRLS 486
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKA-GRIKYGCVEM 812
++ STR VA +WWFFTLIM+SSYTANLAAFLT +++ PI N EDLA A G +KYG
Sbjct: 530 KSSSTRAVASIWWFFTLIMVSSYTANLAAFLTVEQVHSPISNAEDLAAAGGTVKYGAKRD 589
Query: 813 GSTRNFFK 820
GST +FFK
Sbjct: 590 GSTISFFK 597
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 13/101 (12%)
Query: 563 SSGSRLRYSAKNSNVSL----------YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK 612
++G ++Y AK ++ YQRM+ M + P + SN EG+ R E
Sbjct: 577 AAGGTVKYGAKRDGSTISFFKDAEYKTYQRMYEYMMQN-PELLTSSNPEGLNRAKTEN-- 633
Query: 613 YAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKF 653
YAF MES+ IEY VE+ CD+ Q+GGLLD KGYGIAM S+
Sbjct: 634 YAFLMESSSIEYIVERECDVTQIGGLLDDKGYGIAMRKSRL 674
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKG 123
G+AAIFGP S + ++S+C ++PH+E WD +PT +N++P H++ +
Sbjct: 74 GVAAIFGPNSPKAAVHVQSICDEKEMPHIETRWDAYTR-LPT-----INIHPHPHILGRV 127
Query: 124 ISVIINDMDWDTFTIIYET 142
++ +W FTIIYE+
Sbjct: 128 FLDLVVAFEWKDFTIIYES 146
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 731
G+ VDLI ++ L F Y FVL+ + YG+LN +TGKWNG++ EL E
Sbjct: 362 GFGVDLIHELSLMLGFNYTFVLQEDGVYGSLNRETGKWNGMVNELLE 408
>gi|395736389|ref|XP_003776746.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 1 [Pongo abelii]
Length = 908
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 278/574 (48%), Gaps = 56/574 (9%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F + + AF A+ ++ + PP ++ P + V DS C+ S+G
Sbjct: 31 GLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQFSKG 83
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ AIFG N++ S C + F P+ + + T+ + + PE + +
Sbjct: 84 VYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---LQDAL 135
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
II+ W F IY+ L LQ+VL+ A + + ++ + L + YR
Sbjct: 136 ISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRM 189
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQ 242
L ++++ E +++DC ++ IL Q HL+ +++ + +D
Sbjct: 190 LFQDLEKKKERLVVVDCESERLNAILGQVLTFIKHLL--CARHVIKNIGF----MDIDLN 243
Query: 243 DFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVY 301
F+ AN+T +++N T+ IM W +N R V + K +AL YD V
Sbjct: 244 KFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVK 300
Query: 302 LFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
+ A A QSL ++ C NP+ W G+ I ++ + +G+TG + + +
Sbjct: 301 VMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-E 359
Query: 356 TGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
GRR +++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 360 KGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATNAQAGGDNSS-VQNRTYIVTT--- 415
Query: 416 AKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG
Sbjct: 416 ------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGAR 469
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 470 DPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 529
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 563
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 611 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 670
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 671 TKEFFR 676
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 676 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 735
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 736 TMKVGGNLDSKGYGIATPKGSAL 758
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 419 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 478
Query: 725 LIGEL 729
++GEL
Sbjct: 479 MVGEL 483
>gi|295986874|gb|ADG64856.1| glutamate receptor subunit 4 isoform 3 precursor [Trachemys scripta
elegans]
gi|299473862|gb|ADJ18228.1| ionotrophic glutamate receptor variant 3 [Trachemys scripta
elegans]
Length = 883
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 280/577 (48%), Gaps = 49/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQV----SAICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K +AL YD
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQ---REYPGSDSPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S + +G WN L + + E IENRT+ VT+
Sbjct: 364 D-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQHEPSLGNE--SAIENRTVVVTT 420
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M KN +T E GY VDL IA + YK + + Y
Sbjct: 421 ILEA---------PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKY 471
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 531
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIA 647
M+VGG LDSKGYG+A
Sbjct: 741 TMKVGGNLDSKGYGVA 756
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 425 PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|160333465|ref|NP_571970.2| glutamate receptor, ionotropic, AMPA 2b precursor [Danio rerio]
gi|33327158|gb|AAQ08957.1| AMPA receptor subunit GluR2B [Danio rerio]
Length = 879
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 290/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFG------TAEFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N I S C + + + D N+ FI + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGNQQFI-------IQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + + +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAEKKWQV----TAINVGNMKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + +
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-V 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLS----C-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ + + C NP+ W G+ I +K + +DG+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDISRRANNGDCLANPAVPWAQGVEIERALKQVRVDGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++++ +E S+ +G WN V++M K + N T+
Sbjct: 357 NIQFD-QYGKRVNYTVNVMELKSNGAVKIGYWNE---------VDKMVVTKSDLFPNDTM 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GLENKTVIVTTIL--EAPYVMLKKNADLFMDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMKSAEPSVFVKTTAEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGTLDKLKN 781
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 612 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 671
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 672 TKEFFR 677
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFMDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|295986876|gb|ADG64857.1| glutamate receptor subunit 4 isoform 4 precursor [Trachemys scripta
elegans]
gi|299473864|gb|ADJ18229.1| ionotrophic glutamate receptor variant 4 [Trachemys scripta
elegans]
Length = 883
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 280/577 (48%), Gaps = 49/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K +AL YD
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQ---REYPGSDSPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S + +G WN L + + E IENRT+ VT+
Sbjct: 364 D-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQHEPSLGNE--SAIENRTVVVTT 420
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M KN +T E GY VDL IA + YK + + Y
Sbjct: 421 ILEA---------PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKY 471
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 531
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGVATPKGSPLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 425 PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|356991208|ref|NP_001239332.1| glutamate receptor 1 isoform 3 [Mus musculus]
Length = 838
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 260/518 (50%), Gaps = 43/518 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + + II+ W TF IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D F+ AN+T +++N T+ IM W ++ V + K +AL Y
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTY 225
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 226 DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQ 285
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E D + +G WN + T Q + ++NRT VT
Sbjct: 286 FN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVT 343
Query: 412 SKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 344 T---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGK 394
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 395 YGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 454
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 455 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL 687
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|262206636|gb|ACY30742.1| glutamate receptor subunit 4 isoform 1 [Trachemys scripta elegans]
gi|299473858|gb|ADJ18226.1| ionotrophic glutamate receptor variant 1 [Trachemys scripta
elegans]
Length = 901
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 280/577 (48%), Gaps = 49/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K +AL YD
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQ---REYPGSDSPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S + +G WN L + + E IENRT+ VT+
Sbjct: 364 D-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQHEPSLGNE--SAIENRTVVVTT 420
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M KN +T E GY VDL IA + YK + + Y
Sbjct: 421 ILEA---------PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKY 471
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 531
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIA 647
M+VGG LDSKGYG+A
Sbjct: 741 TMKVGGNLDSKGYGVA 756
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 425 PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|148675848|gb|EDL07795.1| glutamate receptor, ionotropic, AMPA1 (alpha 1), isoform CRA_b [Mus
musculus]
Length = 833
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 261/518 (50%), Gaps = 43/518 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C HV F P+ + + T+ + + PE
Sbjct: 1 CSQFSKGVYAIFGFYERRTVNMLTSFCGAL---HV-CFITPS-FPVDTSNQFVLQLRPE- 54
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + + II+ W TF IY+ L LQ+VL+ A + + ++ + L
Sbjct: 55 --LQEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTT 106
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 107 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----M 162
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D F+ AN+T +++N T+ IM W ++ V + K +AL Y
Sbjct: 163 DIDLNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTY 220
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 221 DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQ 280
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E D + +G WN + T Q + ++NRT VT
Sbjct: 281 FN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVT 338
Query: 412 SKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 339 T---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGK 389
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 390 YGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 449
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 450 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 535 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 594
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 595 TKEFFR 600
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 600 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 659
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 660 TMKVGGNLDSKGYGIATPKGSAL 682
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 343 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 402
Query: 725 LIGEL 729
++GEL
Sbjct: 403 MVGEL 407
>gi|410914317|ref|XP_003970634.1| PREDICTED: glutamate receptor 2-like isoform 2 [Takifugu rubripes]
Length = 879
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 289/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFG------TSEFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N I S C + + + D N+ FI + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGNQQFI-------IQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + I
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-I 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLS----C-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T + C NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANNGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKTNGPVKIGYWNE---------VDKMAVTKSDVFANDTT 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GMENKTVIVTTIL--EAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M S M S+ PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWSYMRSAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSPL-RTPVNLAVLKLSEQGVLDKLKN 781
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 727 GELQEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTAN 779
G++Q T S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTAN
Sbjct: 577 GQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 636
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LAAFLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 637 LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFR 677
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|229892277|ref|NP_001153152.1| glutamate receptor 2 [Xenopus laevis]
gi|222875738|gb|ACM69011.1| ionotropic glutamate receptor subunit GluR2(R)flop [Xenopus laevis]
Length = 882
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 286/580 (49%), Gaps = 55/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + L P + ++E +S C+
Sbjct: 26 IQIGGLFPRGADQEYSAFRVGMLLYS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 80 FSRGVFAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 132
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL+ A + ++ ++ + + D
Sbjct: 133 GALLS-LIEYYQWDKFAYLYDSDRGLTTLQAVLDAAAEKKWQV----TAINVGNINNDRK 187
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 188 DETYRSLFQDLEIKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 241
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 242 TDGDLSKIQFGGANVSGFQIVDYDDSLVAKFIQRWSTLEEKEYP---GAHTTTIKYTSAL 298
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DAV + A ++L +++ C NP+ W HG+ I +K + ++G++G
Sbjct: 299 TFDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLSGN 358
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E S+ + +G W+ + + T + + +EN+T+
Sbjct: 359 IKFD-QNGKRVNYTINIMELKSNGPRKIGYWSEVDKMVVTIT-DILSANDSMGLENKTVV 416
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERE 463
VT+ PY+M KN + E GY VDL IA F YK + +
Sbjct: 417 VTT---------ILESPYVMFKKNADQFEGNDRYEGYCVDLAAEIARHCGFKYKLTIVAD 467
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 468 GKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKP 527
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 567
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 680 RRSKIAVFDKMWTYMKSAEPSVFVKTTAEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCD 739
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 740 TMKVGGNLDSKGYGIATPKQSPLGN-AVNLAVLKLNEQGLLDKLKN 784
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 615 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 674
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 675 TKEFFR 680
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E GY VDL IA F YK + + YG + +T WNG+
Sbjct: 424 PYVMFKKNADQFEGNDRYEGYCVDLAAEIARHCGFKYKLTIVADGKYGARDAETKIWNGM 483
Query: 726 IGEL 729
+GEL
Sbjct: 484 VGEL 487
>gi|74145674|dbj|BAE36222.1| unnamed protein product [Mus musculus]
Length = 624
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDT-YGRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|295986878|gb|ADG64858.1| glutamate receptor subunit 4 isoform 5 precursor [Trachemys scripta
elegans]
Length = 767
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 280/577 (48%), Gaps = 49/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K +AL YD
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRW---KKLDQREYPGSDSPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S + +G WN L + + E IENRT+ VT+
Sbjct: 364 D-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQHEPSLGNESA--IENRTVVVTT 420
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M KN +T E GY VDL IA + YK + + Y
Sbjct: 421 ILEA---------PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKY 471
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 531
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYG+A P
Sbjct: 741 TMKVGGNLDSKGYGVATP 758
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 425 PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|507829|gb|AAA67923.1| glutamate receptor flop isoform [Homo sapiens]
gi|1091590|prf||2021272B Glu receptor:ISOTYPE=flop
Length = 894
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 283/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ P M+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPLMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|507827|gb|AAA67922.1| glutamate receptor flip isoform [Homo sapiens]
gi|1091589|prf||2021272A Glu receptor:ISOTYPE=flip
Length = 894
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 283/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ P M+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPLMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|410914315|ref|XP_003970633.1| PREDICTED: glutamate receptor 2-like isoform 1 [Takifugu rubripes]
Length = 897
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 289/581 (49%), Gaps = 59/581 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQFGTS------EFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N I S C + + + D N+ FI + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGNQQFI-------IQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I++Q + H+ G +YI++ + I
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-I 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERKPLPTPLS----C-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T + C NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANNGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKTNGPVKIGYWNE---------VDKMAVTKSDVFANDTT 406
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLER 462
+ +KT +L PY+M KN + E Y GY VDL IA F Y+ +
Sbjct: 407 GMENKTVIVTTIL--EAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVG 464
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 465 DGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 524
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M S M S+ PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWSYMRSAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 781
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 727 GELQEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTAN 779
G++Q T S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTAN
Sbjct: 577 GQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 636
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LAAFLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 637 LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFR 677
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|47086545|ref|NP_997917.1| glutamate receptor, ionotropic, AMPA 4b precursor [Danio rerio]
gi|33327166|gb|AAQ08961.1| AMPA receptor subunit GluR4B [Danio rerio]
Length = 904
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/578 (27%), Positives = 282/578 (48%), Gaps = 50/578 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG + + + S C I + P+ PT G + + P
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCGALHISLIT----PS---FPTEGESQFVLQLRPS-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +++ DW+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 138 -IRGALLSLLDHYDWNRFVFLYDTDRGYSILQAIMEKAGQNGWQVS----AICVENF--N 190
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
YR LL+++ E ++D ++ +L+Q V H+ G +YI++ +
Sbjct: 191 DASYRQLLEDLDRRQEKTFVIDLEAERLNNMLEQIVSVGKHVKG--YHYIMANLGF---- 244
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
++ + F G AN+T ++++ +NP + +M W + R K +AL
Sbjct: 245 KDINLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDAPPKYTSALT 301
Query: 297 YDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A ++L R+ + + W G+ + +K + + G+TG +
Sbjct: 302 YDGVMVMAEAFRNLRRQKVDISRRGIAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNV 361
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D GRR +++++ E S+ + +G WN A L ++ + E +ENRT+ V
Sbjct: 362 QFD-HYGRRVNYTMDVFELKSNGPRRIGYWNDADKLVLTQDHALLPNETY-GMENRTVIV 419
Query: 411 TSKTFAKLRVLFQGEPYMMKNP----ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
T+ + +G M+K E E Y GY VDL IA + F YK + +
Sbjct: 420 TT--------IMEGPYVMLKKNWEMYEGNEQYEGYCVDLASEIAKHIGFKYKISIVPDGK 471
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 YGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 531
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 683 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 742
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 743 TMKVGGNLDSKGYGVATPKGSQLGS-AVNLAVLKLNEQGLLDKLKN 787
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 617 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDSG 676
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 677 STKEFFR 683
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMMKNP-----ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M E E Y GY VDL IA + F YK + + YG +P+T WNG+
Sbjct: 426 PYVMLKKNWEMYEGNEQYEGYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|148675847|gb|EDL07794.1| glutamate receptor, ionotropic, AMPA1 (alpha 1), isoform CRA_a [Mus
musculus]
Length = 833
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 261/518 (50%), Gaps = 43/518 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C HV F P+ + + T+ + + PE
Sbjct: 1 CSQFSKGVYAIFGFYERRTVNMLTSFCGAL---HV-CFITPS-FPVDTSNQFVLQLRPE- 54
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + + II+ W TF IY+ L LQ+VL+ A + + ++ + L
Sbjct: 55 --LQEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTT 106
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 107 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----M 162
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D F+ AN+T +++N T+ IM W ++ V + K +AL Y
Sbjct: 163 DIDLNKFKESGANVTGFQLVNYTDTIPARIMQQW--RTSDARDHTRVDWKRPKYTSALTY 220
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 221 DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQ 280
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E D + +G WN + T Q + ++NRT VT
Sbjct: 281 FN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVT 338
Query: 412 SKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 339 T---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGK 389
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 390 YGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 449
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 450 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 487
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 535 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 594
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 595 TKEFFR 600
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 600 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 659
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 660 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 704
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 343 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 402
Query: 725 LIGEL 729
++GEL
Sbjct: 403 MVGEL 407
>gi|242023424|ref|XP_002432134.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
gi|212517508|gb|EEB19396.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
Length = 882
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 289/593 (48%), Gaps = 72/593 (12%)
Query: 1 MKIVGIFGPNEE--EVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI +F N++ + AF+ AV INK+ K L P+ L + +V N DS H K +C
Sbjct: 49 LKIGAVFTTNQKGGSIEIAFKHAVHNINKE-KNLLPNTKLVYDLAYVNNNDSFHAMKKVC 107
Query: 59 NATSE-GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
+ G+ A+FGP N I+S+ DIPH+E D +K + +N++P
Sbjct: 108 RQVNNLGVRAVFGPTDSFIGNHIQSIFDALDIPHLETRLDLDK----KSKRFSINLHPSQ 163
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
L++K ++ ++W I+YE ++ LV L++++ D K I + +RQ+
Sbjct: 164 ELLNKAYLDLVKFLNWTRIAIVYEENNGLVKLKELI-----DGKSIVL---DIYMRQI-- 213
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
++YR +L I+N +I++D + L + + + +Y+ +
Sbjct: 214 QKNNYRGILNGIRNRDIHNIIIDMKSNNIKFFLNEIFYLKMNDIKYHYVFT--------- 264
Query: 238 TVDFQDFQPGYAN-----ITTVRMINPTNPHIRSIMNGWIYE----------ENERGRSL 282
+D + F N +TT R+IN + ++ ++E G +
Sbjct: 265 NIDVEAFHLLNLNINIINVTTFRLININDDDDDDKKIKNDFDNLKRLIKSIRDDESGDNY 324
Query: 283 NVRAETVKIEAALMYDAVYLFAAALQSLGERK------PLPTPLSCENPSSWQHGLGIGN 336
+ K E AL+YD+VY+FAA LQ+ + P + +SCE+ W GL + N
Sbjct: 325 LNNNQISKTEPALIYDSVYVFAAGLQAFDGNQLSSSSSPSSSNVSCESEIPWNEGLSLIN 384
Query: 337 LMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLN---HSRTVE 393
+ S+ + G+TG I + G R F L+ ++ S + G W GLN S
Sbjct: 385 YINSVELKGLTGPIEF--KEGERVQFKLDLLKINSKKIIKAGEWTPNGGLNITNKSIFFH 442
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGE---LYGYSVDLIKMIAN 450
+D N TL VT+ +PY+M +T L G+ +DL+ IAN
Sbjct: 443 PIDT-------NVTLVVTT---------ILEQPYVMMKTKTNSSFALEGFCIDLLDAIAN 486
Query: 451 ELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMP 510
+ F Y L + YG + +TG+WNG++ +L +++ADLA+ +TI R + +DFT P
Sbjct: 487 LVGFKYNISLVPDGKYGVYDYKTGEWNGMVRQLIDKKADLAVGSMTINYARESVIDFTKP 546
Query: 511 FMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FMTLGISIL++ P + LFSF+ PL+ ++W Y+ AY VSL L +AR+S
Sbjct: 547 FMTLGISILFKVPKNQAAQLFSFMNPLALNIWFYIFAAYALVSLTLLIVARLS 599
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ STR+V +WWFFTLI+ISSYTANLAAFLT RM PI+N EDLA IKYG +E G
Sbjct: 643 RSTSTRIVGAIWWFFTLIIISSYTANLAAFLTVERMISPIENAEDLASQTDIKYGTLESG 702
Query: 814 STRNFFK 820
ST FF+
Sbjct: 703 STMAFFR 709
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 72/105 (68%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + YQ+M ME+ +PSVFV + +EG++RV+ GKYAF MEST
Sbjct: 699 LESGSTMAF-FRDSMIETYQKMWRFMENKKPSVFVSTYEEGIQRVLD--GKYAFLMESTM 755
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y ++++C L+Q+GG+LD+KGYGI P S + K S +L+
Sbjct: 756 LDYILQRDCSLIQIGGILDNKGYGIGTPMGSPWRDKISLAILELQ 800
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 671 EPYMMKNPETGE---LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIG 727
+PY+M +T L G+ +DL+ IAN + F Y L + YG + +TG+WNG++
Sbjct: 458 QPYVMMKTKTNSSFALEGFCIDLLDAIANLVGFKYNISLVPDGKYGVYDYKTGEWNGMVR 517
Query: 728 ELQEQ 732
+L ++
Sbjct: 518 QLIDK 522
>gi|195449685|ref|XP_002072179.1| GK22709 [Drosophila willistoni]
gi|194168264|gb|EDW83165.1| GK22709 [Drosophila willistoni]
Length = 903
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/565 (28%), Positives = 278/565 (49%), Gaps = 49/565 (8%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGP 71
E + F+ A+ +N + ++P ++ Q +S+ +C G+ A+FGP
Sbjct: 45 ERIRRTFDHAISVVNNEL-SVP---LVGETHQMTSYGNSVEAFGQLCKLMQSGVGAVFGP 100
Query: 72 QSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDM 131
+ + + C DIP + + ++ G N++P I+ + II
Sbjct: 101 SAKHTSAHLLNACDSKDIPFIYP------HLSWSSQTDGFNLHPHPEDIANALHDIIEQF 154
Query: 132 DWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---DYRPLLKE 188
W + YE+ + L L ++ R GR S ++ L D + +Y+ +L+
Sbjct: 155 QWSRYIFCYESSEYLTILDYLMS---------RYGRKSPVVKVLRFDLNLNGNYKSVLRR 205
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
I+ S ++ I++ S + +L+QA++V +M + YI+ ++ HT + ++++
Sbjct: 206 IRKSEDNRIVIVGSTEGVAELLRQAQQVGIMNEDYTYIIGN----LDLHTFELEEYKHSE 261
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
NIT +RM +P +R+++ +++E S N + ++ + AL YDA+ + A +
Sbjct: 262 VNITGLRMFSPDQEEVRNLVE-LLHQEIGESESTNNGSSSITLAMALTYDAIRVIAETTK 320
Query: 309 SLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFSL 364
L + P L+C E + Q G N M+S+ I MTGR+ + RR F+
Sbjct: 321 HLPYQ---PQMLNCSERHDNVQPDGSTFRNYMRSLEIKDKTMTGRVYFEGN--RRKGFTF 375
Query: 365 EFVEYVSDQWKVLGTWNTA--FGLNHSRTVEQMDKEKKEKIENRT----LTVTSKTFAKL 418
+ +E +G W F V ++ + N+T ++VT+ +A L
Sbjct: 376 DVIELQIGGLVKVGVWEDGKEFEFKRPPPVINYNELDDGSLVNKTFKVLISVTTPPYASL 435
Query: 419 RVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
F+ ++ N + GY VDLIK +A++L F + F + + YG+ N T G
Sbjct: 436 VTTFET---LIGN---NQYQGYGVDLIKELADKLGFNFTF-QDGGSEYGSFNKTTNTTTG 488
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ E RADLAI DLTITSER +DF++PFM LGI+ILY K K P LFSF++P S
Sbjct: 489 MLKEIVEGRADLAISDLTITSEREEVIDFSIPFMNLGIAILYVKAQKAPPALFSFMDPFS 548
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW+Y+ AYLGVSL F L R+S
Sbjct: 549 KEVWLYLGIAYLGVSLCFFILGRLS 573
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A+S R ++ +WWFFTLIM+SSYTANLAAFLT PI NV+DLA+ ++YG
Sbjct: 617 KALSVRTISAIWWFFTLIMVSSYTANLAAFLTIEYPTSPINNVDDLAENKDGVQYGAKRE 676
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 677 GSTRNFF 683
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGK-YAFFMESTGIEYEVEKNCDLMQVGGL 638
Y +M+ + S P + V +N+EGV +V E G+ YAF MEST IEY + ++C+L +VG
Sbjct: 691 YMKMNEYL-MSHPEMLVATNQEGVSKV--EAGRDYAFLMESTSIEYTMVRHCNLTKVGEA 747
Query: 639 LDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
LD KGYGIAM + + F A L + QG +KN
Sbjct: 748 LDEKGYGIAM-IKNWPYRDKFNNALLELQEQGVLAKLKN 785
>gi|7406947|gb|AAF61847.1|AF159278_1 glutamate receptor subunit 3 [Homo sapiens]
Length = 894
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 283/586 (48%), Gaps = 65/586 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-- 176
+ I ++ W+ F +Y+T LQ ++E A ++ + VT R +
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQ-------VTARSVGHI 196
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYW 233
D ++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 197 KDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF- 252
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIE 292
+ + G ANIT +++N NP ++ + W+ +E E + N +K
Sbjct: 253 ---TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYT 306
Query: 293 AALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGM 346
+AL +DA+ + A A + L ++ + C NP+ W G+ I +K + + GM
Sbjct: 307 SALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGM 366
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKI 403
TG I D+ GRR +++++ E + G WN + R V D++
Sbjct: 367 TGNIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASS 420
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYK 457
ENRT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 421 ENRTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYK 471
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ P M+LGIS
Sbjct: 472 LSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPLMSLGIS 531
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
I+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 IMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|520634|emb|CAA82799.1| glutamate receptor subunit [Columba livia]
Length = 883
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 167/583 (28%), Positives = 282/583 (48%), Gaps = 61/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRAADQEYSAFRVGMVQFSTS------KFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S + AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRRVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I W F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWTKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEVKRERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ +P + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYDDPLVSKFIQRWSTLEEKELP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W HG+ I +K + ++G+TG
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEKIENR 406
I D Q G+R +F++ +E S + +G W+ V +D + +EN+
Sbjct: 360 IKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNQSSGLENK 414
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E GY VDL IA F YK +
Sbjct: 415 TIIVTT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTI 465
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+
Sbjct: 466 VGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMI 525
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|190339462|gb|AAI62655.1| Glutamate receptor, ionotropic, AMPA 2a [Danio rerio]
Length = 875
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 291/579 (50%), Gaps = 55/579 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 22 VQIGGLFPRGADQEYSAFRIGMVQFG------TAEFRLTPHIDNLEVANSFAITNCFCSQ 75
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C+ HV +F P+ P +G++ + +
Sbjct: 76 FSRGVYAIFGFYDKKSVNTITSFCETL---HV-SFITPS---FPADGLNQFVLQMRPDIK 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
IS ++ WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 129 GPLIS-LVEYYKWDKFAYLYDSDRGLSTLQAVLDTAAERKWQV----TAINVGNLKDEWK 183
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++N +E ++LDC DK I++Q + H+ G +YI++ + ++
Sbjct: 184 DEAYRSLFQDLENKNERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANFGF-VDG 240
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
D Q G AN++ ++++ +P + W E + + R ++ +AL
Sbjct: 241 ---DLSKIQYGGANVSGFQIVDFDDPLVAKFDQRWEALEEKEYPGADSR---IRYTSALT 294
Query: 297 YDAVYLFAAALQSLGERKPLPTPLS----C-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YDAV + A + L +++ + C NP+ W G+ I +K + +DG+TG I
Sbjct: 295 YDAVQVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNI 354
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D Q GRR ++++ +E + +G WN +++M K + N T+ +
Sbjct: 355 QFD-QYGRRVNYTVNVMELKNSGPVKIGYWNE---------MDKMAVTKSDLFPNDTMGM 404
Query: 411 TSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
+KT +L PY+M KN E E Y GY VDL IA F Y+ + +
Sbjct: 405 ENKTVIVTTIL--EAPYVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLRIVADG 462
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 463 KYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 522
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 523 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 608 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 667
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 668 TKEFFR 673
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 673 RRSKIALFDKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLLESTMNEYIEQRKPCD 732
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 733 TMKVGGNLDSKGYGIATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 777
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 418 PYVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLRIVADGKYGARDAETKIWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|295986872|gb|ADG64855.1| glutamate receptor subunit 4 isoform 2 precursor [Trachemys scripta
elegans]
gi|299473860|gb|ADJ18227.1| ionotrophic glutamate receptor variant 2 [Trachemys scripta
elegans]
Length = 901
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 280/577 (48%), Gaps = 49/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K +AL YD
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQ---REYPGSDSPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E S + +G WN L + + E IENRT+ VT+
Sbjct: 364 D-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQHEPSLGNE--SAIENRTVVVTT 420
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M KN +T E GY VDL IA + YK + + Y
Sbjct: 421 ILEA---------PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKY 471
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 472 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 531
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGVATPKGSPLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 425 PYVMFKKNHDTFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|7406948|gb|AAF61848.1| glutamate receptor subunit 3 [Homo sapiens]
Length = 894
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 283/586 (48%), Gaps = 65/586 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-- 176
+ I ++ W+ F +Y+T LQ ++E A ++ + VT R +
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQ-------VTARSVGHI 196
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYW 233
D ++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 197 KDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF- 252
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIE 292
+ + G ANIT +++N NP ++ + W+ +E E + N +K
Sbjct: 253 ---TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYT 306
Query: 293 AALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGM 346
+AL +DA+ + A A + L ++ + C NP+ W G+ I +K + + GM
Sbjct: 307 SALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGM 366
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKI 403
TG I D+ GRR +++++ E + G WN + R V D++
Sbjct: 367 TGNIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASS 420
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYK 457
ENRT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 421 ENRTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYK 471
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ P M+LGIS
Sbjct: 472 LSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPLMSLGIS 531
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
I+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 532 IMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|12852206|dbj|BAB29316.1| unnamed protein product [Mus musculus]
Length = 767
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 284/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTIHIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVLAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYGIA P L
Sbjct: 741 TMKVGGNLDSKGYGIATPKGTSLG 764
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|56122248|gb|AAV74275.1| glutamate receptor ionotropic kainate 4 [Saimiri boliviensis]
Length = 779
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 6 TAETMCQILPKGVVAVLGPSSSXASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 63
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 64 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 116
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 117 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 175
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 176 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 225
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 226 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 285
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 286 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 342
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 343 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 399
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 400 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 457
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 458 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 496
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 597 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 653
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 654 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 698
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 537 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 596
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 597 IHGGSSMTFFQ 607
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 354 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 411
Query: 725 LIGEL 729
++GEL
Sbjct: 412 MVGEL 416
>gi|348559678|ref|XP_003465642.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3-like [Cavia
porcellus]
Length = 894
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 284/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIF + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFEFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 577
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|221041658|dbj|BAH12506.1| unnamed protein product [Homo sapiens]
Length = 662
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 170/579 (29%), Positives = 283/579 (48%), Gaps = 59/579 (10%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F N + +AF AV+ N + L V H+++ +S C+ S G
Sbjct: 22 GLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRG 81
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKG- 123
+ AIFG + N + S C +F P+ PT+ V + KG
Sbjct: 82 VYAIFGFYDQMSMNTLTSFCGALHT----SFVTPS---FPTDA--DVQFVIQMRPALKGA 132
Query: 124 ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYR 183
I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D ++R
Sbjct: 133 ILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----DVQEFR 187
Query: 184 PLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWINAHTVD 240
+++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ + +
Sbjct: 188 RIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF----TDIL 240
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAALMYDA 299
+ G ANIT +++N NP ++ + W+ +E E + N +K +AL +DA
Sbjct: 241 LERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSALTHDA 297
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
+ + A A + L ++ + C NP+ W G+ I +K + + GMTG I D
Sbjct: 298 ILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFD 357
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIENRTLTV 410
+ GRR +++++ E + G WN + R V D++ ENRT+ V
Sbjct: 358 T-YGRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSENRTIVV 411
Query: 411 TSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ PY+M KN E E Y GY VDL IA + YK + +
Sbjct: 412 TT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDG 462
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 463 KYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 522
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 523 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 418 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|139394534|ref|NP_001077280.1| glutamate receptor 2 isoform 2 precursor [Rattus norvegicus]
gi|204382|gb|AAA41240.1| glutamate receptor subunit 2 [Rattus norvegicus]
gi|204396|gb|AAA41244.1| glutamate receptor (GluR-B), partial [Rattus norvegicus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|426244397|ref|XP_004016009.1| PREDICTED: glutamate receptor 4 isoform 1 [Ovis aries]
Length = 902
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
+YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 NYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVQIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDIDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|139394522|ref|NP_001077275.1| glutamate receptor 2 isoform 1 precursor [Mus musculus]
gi|68563414|dbj|BAE06155.1| AMPA-selective glutamate receptor 2 flip type [Mus musculus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|354486841|ref|XP_003505586.1| PREDICTED: glutamate receptor 4 isoform 2 [Cricetulus griseus]
Length = 902
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|348582532|ref|XP_003477030.1| PREDICTED: glutamate receptor 2 isoform 2 [Cavia porcellus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|85861224|ref|NP_038568.2| glutamate receptor 2 isoform 2 precursor [Mus musculus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|125858934|gb|AAI29857.1| Gria3 protein [Mus musculus]
Length = 888
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 283/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +F FL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVFPFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGT-PVNLAVLKLSEQGILDKLKN 790
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|3287964|sp|P19491.2|GRIA2_RAT RecName: Full=Glutamate receptor 2; Short=GluR-2; AltName:
Full=AMPA-selective glutamate receptor 2; AltName:
Full=GluR-B; AltName: Full=GluR-K2; AltName:
Full=Glutamate receptor ionotropic, AMPA 2; Short=GluA2;
Flags: Precursor
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|348582530|ref|XP_003477029.1| PREDICTED: glutamate receptor 2 isoform 1 [Cavia porcellus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|354476093|ref|XP_003500259.1| PREDICTED: glutamate receptor 2 isoform 1 [Cricetulus griseus]
gi|148683503|gb|EDL15450.1| glutamate receptor, ionotropic, AMPA2 (alpha 2), isoform CRA_d [Mus
musculus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|22096313|sp|P23819.3|GRIA2_MOUSE RecName: Full=Glutamate receptor 2; Short=GluR-2; AltName:
Full=AMPA-selective glutamate receptor 2; AltName:
Full=GluR-B; AltName: Full=GluR-K2; AltName:
Full=Glutamate receptor ionotropic, AMPA 2; Short=GluA2;
Flags: Precursor
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|62088714|dbj|BAD92804.1| glutamate receptor, ionotropic, AMPA 2 variant [Homo sapiens]
Length = 911
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 55 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 108
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 109 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 161
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 162 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 216
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 217 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 270
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 271 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 327
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 328 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 387
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 388 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 445
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 446 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 502
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 503 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 562
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 563 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 596
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 709 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 768
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 769 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 813
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 644 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 703
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 704 TKEFFR 709
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 453 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 512
Query: 726 IGEL 729
+GEL
Sbjct: 513 VGEL 516
>gi|334331157|ref|XP_001375131.2| PREDICTED: glutamate receptor 2 [Monodelphis domestica]
Length = 948
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLSKIQFGGANVSGFQIVDYEDSLVSKFVQRWSTLEEKEYP---GAHTSTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEMDKMVVTLT-EIPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|149048283|gb|EDM00859.1| glutamate receptor, ionotropic, AMPA2, isoform CRA_a [Rattus
norvegicus]
Length = 883
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|62087768|dbj|BAD92331.1| glutamate receptor, ionotropic, AMPA 1 variant [Homo sapiens]
Length = 833
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 260/520 (50%), Gaps = 45/520 (8%)
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 1 ICSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE 55
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 56 ---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILT 106
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 107 TTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF---- 162
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAAL 295
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 163 MDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSAL 219
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG
Sbjct: 220 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGN 279
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
+ + + GRR +++L +E D + +G WN + T Q + ++NRT
Sbjct: 280 VQFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYI 337
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 338 VTT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSD 388
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 389 GKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 448
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 449 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 488
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 536 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 595
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 596 TKEFFR 601
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 601 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 660
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 661 TMKVGGNLDSKGYGIATPKGSAL 683
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 344 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 403
Query: 725 LIGEL 729
++GEL
Sbjct: 404 MVGEL 408
>gi|134304848|ref|NP_001077088.1| glutamate receptor 2 isoform 2 precursor [Homo sapiens]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|350587551|ref|XP_003482437.1| PREDICTED: glutamate receptor 2 isoform 2 [Sus scrofa]
Length = 890
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 34 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 88 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 141 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 195
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 196 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 249
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 250 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 306
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 307 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 366
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 367 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 424
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 425 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 481
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 482 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 541
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 542 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 575
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 688 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 747
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 748 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 792
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 623 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 682
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 683 TKEFFR 688
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 432 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 491
Query: 726 IGEL 729
+GEL
Sbjct: 492 VGEL 495
>gi|431918067|gb|ELK17295.1| Glutamate receptor 1 [Pteropus alecto]
Length = 827
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 261/520 (50%), Gaps = 45/520 (8%)
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ S+G+ AIFG N++ S C HV F P+ + + T+ + + PE
Sbjct: 50 VCSQFSKGVYAIFGFYERRTVNMLTSFCGAL---HV-CFITPS-FPVDTSNQFVLQLRPE 104
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 105 ---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILT 155
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 156 TTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF---- 211
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAAL 295
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 212 MDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSAL 268
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG
Sbjct: 269 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGN 328
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
+ + + GRR +++L +E D + +G WN + T Q + ++NRT
Sbjct: 329 VQFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYI 386
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 387 VTT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSD 437
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 438 GKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 497
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 498 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 537
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 585 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 644
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 645 TKEFFR 650
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 650 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 709
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 710 TMKVGGNLDSKGYGIATPKGSAL 732
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 393 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 452
Query: 725 LIGEL 729
++GEL
Sbjct: 453 MVGEL 457
>gi|8393475|ref|NP_058957.1| glutamate receptor 2 isoform 1 precursor [Rattus norvegicus]
gi|56290|emb|CAA38465.1| glutamate receptor [Rattus norvegicus]
gi|482943|gb|AAC37652.1| glutamate receptor [Rattus norvegicus]
gi|5764400|gb|AAD51284.1| glutamate receptor subunit GluR2-flip [Rattus norvegicus]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGT-PVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|350587553|ref|XP_003482438.1| PREDICTED: glutamate receptor 2 isoform 3 [Sus scrofa]
Length = 890
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 34 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 88 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 141 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 195
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 196 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 249
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 250 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 306
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 307 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 366
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 367 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 424
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 425 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 481
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 482 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 541
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 542 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 575
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 688 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 747
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 748 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 792
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 623 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 682
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 683 TKEFFR 688
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 432 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 491
Query: 726 IGEL 729
+GEL
Sbjct: 492 VGEL 495
>gi|297515498|ref|NP_001069789.2| glutamate receptor 2 isoform 1 precursor [Bos taurus]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|149048284|gb|EDM00860.1| glutamate receptor, ionotropic, AMPA2, isoform CRA_b [Rattus
norvegicus]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|380812020|gb|AFE77885.1| glutamate receptor 2 isoform 2 precursor [Macaca mulatta]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|297515500|ref|NP_001172045.1| glutamate receptor 2 isoform 2 precursor [Bos taurus]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|426370300|ref|XP_004052105.1| PREDICTED: glutamate receptor 4 isoform 2 [Gorilla gorilla gorilla]
Length = 884
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL ++K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRKQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|496140|gb|AAC37653.1| AMPA selective glutamate receptor [Mus musculus]
Length = 921
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|74275354|ref|NP_000817.2| glutamate receptor 2 isoform 1 precursor [Homo sapiens]
gi|168277714|dbj|BAG10835.1| glutamate receptor 2 precursor [synthetic construct]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|341926239|ref|NP_001171924.2| glutamate receptor 2 isoform 2 precursor [Pan troglodytes]
gi|332217589|ref|XP_003257941.1| PREDICTED: glutamate receptor 2 isoform 2 [Nomascus leucogenys]
gi|395735450|ref|XP_003776589.1| PREDICTED: glutamate receptor 2 isoform 2 [Pongo abelii]
gi|397504004|ref|XP_003822600.1| PREDICTED: glutamate receptor 2 isoform 2 [Pan paniscus]
gi|402870717|ref|XP_003899352.1| PREDICTED: glutamate receptor 2 isoform 1 [Papio anubis]
gi|403272254|ref|XP_003927988.1| PREDICTED: glutamate receptor 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426345842|ref|XP_004040607.1| PREDICTED: glutamate receptor 2 isoform 1 [Gorilla gorilla gorilla]
gi|23831146|sp|P42262.3|GRIA2_HUMAN RecName: Full=Glutamate receptor 2; Short=GluR-2; AltName:
Full=AMPA-selective glutamate receptor 2; AltName:
Full=GluR-B; AltName: Full=GluR-K2; AltName:
Full=Glutamate receptor ionotropic, AMPA 2; Short=GluA2;
Flags: Precursor
gi|119625273|gb|EAX04868.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_d [Homo
sapiens]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|281340786|gb|EFB16370.1| hypothetical protein PANDA_012817 [Ailuropoda melanoleuca]
Length = 840
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 260/520 (50%), Gaps = 45/520 (8%)
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 8 VCSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE 62
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 63 ---LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILT 113
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 114 TTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF---- 169
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAAL 295
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 170 MDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSAL 226
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG
Sbjct: 227 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGN 286
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
+ + + GRR +++L +E D + +G WN + T Q + ++NRT
Sbjct: 287 VQFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYI 344
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 345 VTT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSD 395
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 396 GKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 455
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 456 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 495
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 543 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 602
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 603 TKEFFR 608
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 608 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 667
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 668 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 712
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 351 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 410
Query: 725 LIGEL 729
++GEL
Sbjct: 411 MVGEL 415
>gi|122063502|sp|Q38PU7.1|GRIA2_MACFA RecName: Full=Glutamate receptor 2; Short=GluR-2; AltName:
Full=AMPA-selective glutamate receptor 2; AltName:
Full=GluR-B; AltName: Full=GluR-K2; AltName:
Full=Glutamate receptor ionotropic, AMPA 2; Short=GluA2;
Flags: Precursor
gi|76574772|gb|ABA47254.1| GluR2 [Macaca fascicularis]
gi|387539876|gb|AFJ70565.1| glutamate receptor 2 isoform 2 precursor [Macaca mulatta]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|342187218|ref|NP_001172017.2| glutamate receptor 2 isoform 2 precursor [Equus caballus]
gi|291401073|ref|XP_002716955.1| PREDICTED: glutamate receptor, ionotropic, AMPA2 (alpha 2)-like
[Oryctolagus cuniculus]
gi|395843951|ref|XP_003794734.1| PREDICTED: glutamate receptor 2 isoform 1 [Otolemur garnettii]
gi|426247125|ref|XP_004017337.1| PREDICTED: glutamate receptor 2 isoform 2 [Ovis aries]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|341926232|ref|NP_001171923.2| glutamate receptor 2 isoform 1 precursor [Pan troglodytes]
gi|297674568|ref|XP_002815295.1| PREDICTED: glutamate receptor 2 isoform 1 [Pongo abelii]
gi|332217587|ref|XP_003257940.1| PREDICTED: glutamate receptor 2 isoform 1 [Nomascus leucogenys]
gi|397504002|ref|XP_003822599.1| PREDICTED: glutamate receptor 2 isoform 1 [Pan paniscus]
gi|402870719|ref|XP_003899353.1| PREDICTED: glutamate receptor 2 isoform 2 [Papio anubis]
gi|403272256|ref|XP_003927989.1| PREDICTED: glutamate receptor 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|426345844|ref|XP_004040608.1| PREDICTED: glutamate receptor 2 isoform 2 [Gorilla gorilla gorilla]
gi|119625270|gb|EAX04865.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|342187216|ref|NP_001172016.3| glutamate receptor 2 isoform 1 precursor [Equus caballus]
gi|395843953|ref|XP_003794735.1| PREDICTED: glutamate receptor 2 isoform 2 [Otolemur garnettii]
gi|426247123|ref|XP_004017336.1| PREDICTED: glutamate receptor 2 isoform 1 [Ovis aries]
gi|281341913|gb|EFB17497.1| hypothetical protein PANDA_007935 [Ailuropoda melanoleuca]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|148683501|gb|EDL15448.1| glutamate receptor, ionotropic, AMPA2 (alpha 2), isoform CRA_b [Mus
musculus]
Length = 792
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 52 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 105
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 106 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 158
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 159 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 213
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 214 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 267
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 268 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 324
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 325 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 384
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 385 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 442
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 443 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 499
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 500 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 559
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 560 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 593
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 641 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 700
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 701 TKEFFR 706
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 706 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 765
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 766 TMKVGGNLDSKGYGIATPKGSSL 788
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 450 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 509
Query: 726 IGEL 729
+GEL
Sbjct: 510 VGEL 513
>gi|342187260|ref|NP_001171942.2| glutamate receptor 2 isoform 1 precursor [Macaca mulatta]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|195391023|ref|XP_002054165.1| GJ24288 [Drosophila virilis]
gi|194152251|gb|EDW67685.1| GJ24288 [Drosophila virilis]
Length = 900
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/567 (29%), Positives = 269/567 (47%), Gaps = 54/567 (9%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N D P+V E +S+ +C G+ A+
Sbjct: 43 DRIRQTFEHAIAVVNSDLSV--------PLVGETEQVAYGNSVQAFTQLCRLMQNGVGAV 94
Query: 69 FGPQSIENRNIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISV 126
FGP + + + C DIP + W P G N++P I+ +
Sbjct: 95 FGPSAKHTAAHLLNACDAKDIPFIYPHLSWSPQ--------TDGFNLHPHPEDIAHALYD 146
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLL 186
II +W F YE+ + L L ++ I+ R + + +Y+ +L
Sbjct: 147 IIKQFEWSRFIFCYESSEYLTILDHLMTLYGIKGPVIKVMRYDLNLN------GNYKAVL 200
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
+ ++ S ++ I++ S + +L+QA++V +M + Y++ ++ HT + ++++
Sbjct: 201 RRVRKSEDNRIVVVGSTEGVAELLRQAQQVGIMNEDYTYLVGN----LDLHTYELEEYKY 256
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAA 306
ANIT +RM +P +R ++ +E E N + + + AL YDAV + A
Sbjct: 257 SEANITGIRMFDPDKKEVRDLIETLQHELGE-SEPTNNGSSPITLAMALTYDAVRVIAET 315
Query: 307 LQSLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITI--DGMTGRINLDSQTGRRNSF 362
L + P L+C E + Q G N M+S+ I +TGRI Q R F
Sbjct: 316 TNYLPYQ---PQQLNCSERHDNVQPDGSTFRNYMRSLEILEKTITGRIFF--QGYMRKGF 370
Query: 363 SLEFVEYVSDQWKVLGTWNTA--FGLNHSRTVEQMDKEKKEKIENRT----LTVTSKTFA 416
S + +E +GTW F + + ++ + N+T ++V +K +A
Sbjct: 371 SFDVIELQPVGLVKVGTWEEGKEFEFKRPPQIPTFNDNEENSLVNKTFKVLISVPNKPYA 430
Query: 417 KLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
L + ++ N + GY +DLIK +A +L F + F N YG+ N T
Sbjct: 431 SL---VESINTLIGN---SQYEGYGIDLIKELAEKLGFNFTF-HNGGNDYGSFNKTTNLT 483
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEP 536
G++ E+ E ADLAI DLTITSER A+DF++PFM LGI+ILY KP K +P LFSF++P
Sbjct: 484 TGMLKEIVEGHADLAITDLTITSEREEAIDFSIPFMNLGIAILYVKPQKAEPALFSFMDP 543
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARIS 563
S +VW+Y+ AYLGVSL LF L R+S
Sbjct: 544 FSKEVWLYLGIAYLGVSLCLFVLGRLS 570
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT + I +VEDLA+ ++YG
Sbjct: 614 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPSSSINSVEDLAENKDEVQYGAKRT 673
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 674 GSTRNFF 680
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y +M++ M +S P + ++N+ GV++V K KYAF MEST IEY + C+L ++G L
Sbjct: 688 YMKMNAYM-TSHPEMLTETNQAGVDKV-KAGTKYAFLMESTSIEYNTVRECNLKKIGEAL 745
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAMP + + + F A L + QG +KN
Sbjct: 746 DEKGYGIAMPKN-WPYRDKFNNALLELQEQGVLARLKN 782
>gi|122063503|sp|Q38PU6.1|GRIA3_MACFA RecName: Full=Glutamate receptor 3; Short=GluR-3; AltName:
Full=AMPA-selective glutamate receptor 3; AltName:
Full=GluR-C; AltName: Full=GluR-K3; AltName:
Full=Glutamate receptor ionotropic, AMPA 3; Short=GluA3;
Flags: Precursor
gi|76574774|gb|ABA47255.1| GluR3 [Macaca fascicularis]
Length = 894
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 283/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 34 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 93
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 94 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 144
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 145 -LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 198
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 199 VQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 252
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 253 -TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 308
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 309 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 368
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 369 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSEN 422
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 423 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 473
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 474 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + A +GVS++LF ++R S
Sbjct: 534 IKKPQKSKPGVFSFLDPLAYEIWMCIVFASIGVSVVLFLVSRFS 577
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 692 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 751
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 752 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 796
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 627 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 686
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 687 TKEFFR 692
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 434 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 493
Query: 726 IGEL 729
+GEL
Sbjct: 494 VGEL 497
>gi|387539878|gb|AFJ70566.1| glutamate receptor 2 isoform 1 precursor [Macaca mulatta]
Length = 883
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGT-PVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|164419736|ref|NP_001070711.2| glutamate receptor 4 isoform 2 precursor [Homo sapiens]
Length = 884
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|387273275|gb|AFJ70132.1| glutamate receptor 4 isoform 2 precursor [Macaca mulatta]
Length = 884
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|342187264|ref|NP_001171943.2| glutamate receptor 2 isoform 2 precursor [Macaca mulatta]
Length = 883
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|119587470|gb|EAW67066.1| glutamate receptor, ionotrophic, AMPA 4, isoform CRA_a [Homo
sapiens]
Length = 884
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|119625271|gb|EAX04866.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_b [Homo
sapiens]
Length = 922
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|440907134|gb|ELR57315.1| Glutamate receptor 1, partial [Bos grunniens mutus]
Length = 832
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 259/518 (50%), Gaps = 43/518 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 1 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 54
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 55 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 106
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 107 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----M 162
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D F+ AN+T +++N T+ IM W E R S V + K +AL Y
Sbjct: 163 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQRWKTSE-ARDHS-RVDWKRPKYTSALTY 220
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 221 DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQ 280
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E D + +G WN + T Q + ++NRT VT
Sbjct: 281 FN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVT 338
Query: 412 SKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 339 T---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGK 389
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 390 YGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 449
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 450 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 487
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 535 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 594
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 595 TKEFFR 600
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 600 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 659
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 660 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 704
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 343 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 402
Query: 725 LIGEL 729
++GEL
Sbjct: 403 MVGEL 407
>gi|332208076|ref|XP_003253122.1| PREDICTED: glutamate receptor 4 isoform 1 [Nomascus leucogenys]
gi|397516378|ref|XP_003828407.1| PREDICTED: glutamate receptor 4 isoform 1 [Pan paniscus]
Length = 884
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|195473842|ref|XP_002089201.1| GE25515 [Drosophila yakuba]
gi|194175302|gb|EDW88913.1| GE25515 [Drosophila yakuba]
Length = 907
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 283/588 (48%), Gaps = 73/588 (12%)
Query: 5 GIFGPNEEEVATAFEIAVRRINK-DFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
IF NE+E+ +F+ A R +N F L I + + DS ++ C S
Sbjct: 36 AIFYENEKEIELSFDQAFREVNNMKFSELR----FVTIKRFMPTNDSFLLQQITCELISN 91
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI---PTNGVHGVNVYPESHLI 120
G+AAIFGP S +I+ + IPH+E +D N VNV P ++
Sbjct: 92 GVAAIFGPSSKAASDIVAQIANATGIPHIE--YDLKLEATRQEQLNHQMSVNVAPSLSVL 149
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
S+ +I + +W TFT++YET + L LQ ++ +D ++ +R L
Sbjct: 150 SRAYFEIIKTNYEWRTFTLVYETPEGLARLQDLMNIQELNDDYVK-------LRNLADYA 202
Query: 180 DDYRPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINAH 237
DDYR L KE + E I+LDC +L+ + + L G ++N+ L+ L ++
Sbjct: 203 DDYRILWKETDETFHEQRIILDCEPKTLKKLLQVSIDFKLQGPFRNWFLTHLDTHSSGLR 262
Query: 238 TVDFQDFQPGYANITTVRM-INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA-- 294
+ +DF+ ANIT+VR+ + NP ER ++ + + + +
Sbjct: 263 DIYNEDFK---ANITSVRIKVVDANPF-------------ERKKTRLTQVDQILADQTML 306
Query: 295 --LMYDAVYLFA-------AALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG 345
L+YDAV LFA AA+QS P C + S W G I N MK+I+ D
Sbjct: 307 PILIYDAVVLFASSARNVIAAMQSFH-----PPNRHCGSASPWMMGAFIVNEMKTISEDD 361
Query: 346 MTGRINLDS----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKE 401
+ ++ + G+R F+LE + ++ L W G+ R +++
Sbjct: 362 VEPHFKTENLRLNENGQRTHFNLEIYKPTVNE--PLLVWTPDNGIKKRRLTLELESGGN- 418
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFT 455
+ +V K + V EPY M +N E Y GY+VDLI ++ LNF
Sbjct: 419 ---TQDFSVQRKVYTV--VTHYEEPYFMMKEDHENFRGKEKYEGYAVDLINKLSELLNFD 473
Query: 456 YKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
Y+F++ N G NP+T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LG
Sbjct: 474 YEFMIVDGN--GKYNPETKQWDGIIRKLIDHHAQIGICDLTITQMRRSVVDFTVPFMQLG 531
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
ISIL+ K + F+FL+P + +VW+YM A L ++L F+AR+S
Sbjct: 532 ISILHYKSPPAPKNQFAFLKPFAVEVWIYMVFAQLIMTLAFVFIARLS 579
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ +PS F +NKEGV RV KEKG+YAF ME+T + Y +E+NCDL Q
Sbjct: 691 SNDTDYQRAWNQMKDFKPSAFTTTNKEGVARVRKEKGEYAFLMETTSMTYNIERNCDLTQ 750
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P S + S +L +G+ MKN
Sbjct: 751 IGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSE--KGDLQKMKN 792
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL + ++ +G + GST F
Sbjct: 628 RILTGMWWFFALMMLSTYTANLAAFLTSDKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLF 687
Query: 819 F 819
F
Sbjct: 688 F 688
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 671 EPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M +N E Y GY+VDLI ++ LNF Y+F++ N G NP+T +W+G
Sbjct: 437 EPYFMMKEDHENFRGKEKYEGYAVDLINKLSELLNFDYEFMIVDGN--GKYNPETKQWDG 494
Query: 725 LIGEL 729
+I +L
Sbjct: 495 IIRKL 499
>gi|90651983|gb|AAI14550.1| GRIA4 protein [Homo sapiens]
Length = 883
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 26 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 85
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 86 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 138
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 139 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 191
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 192 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 245
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 246 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 297
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 298 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 357
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 358 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 415
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 416 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 466
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 467 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 526
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 681 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 425 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|354486839|ref|XP_003505585.1| PREDICTED: glutamate receptor 4 isoform 1 [Cricetulus griseus]
Length = 902
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|493134|gb|AAA58631.1| glutamate receptor 2 [Homo sapiens]
Length = 883
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLEF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGT-PVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|496139|gb|AAC37654.1| AMPA selective glutamate receptor [Mus musculus]
Length = 939
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|26336607|dbj|BAC31986.1| unnamed protein product [Mus musculus]
gi|26338456|dbj|BAC32899.1| unnamed protein product [Mus musculus]
gi|261278082|dbj|BAI44627.1| AMPA-selective glutamate receptor 2 short type [Mus musculus]
Length = 767
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYGIA P L
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLG 764
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|449269758|gb|EMC80509.1| Glutamate receptor 4 [Columba livia]
Length = 902
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 166/585 (28%), Positives = 285/585 (48%), Gaps = 64/585 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ + P + +M W + L+ R +ET K +
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIE 404
G + D GRR +++++ E + + +G WN L H T+ IE
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTL----GNDTSAIE 413
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKF 458
NRT+ VT+ A PY+M KN +T E GY VDL IA + YK
Sbjct: 414 NRTVVVTTILEA---------PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKI 464
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI
Sbjct: 465 AIVPDGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYG+A P
Sbjct: 742 TMKVGGNLDSKGYGVATP 759
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 426 PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|426370304|ref|XP_004052107.1| PREDICTED: glutamate receptor 4 isoform 4 [Gorilla gorilla gorilla]
Length = 771
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL ++K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRKQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VGG LDSKGYG+A P L +
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLRR 766
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|380793107|gb|AFE68429.1| glutamate receptor 2 isoform 1 precursor, partial [Macaca mulatta]
Length = 781
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + A L++ QG
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQG 778
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|85861220|ref|NP_001034284.1| glutamate receptor 2 isoform 3 precursor [Mus musculus]
Length = 767
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL 763
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|355687686|gb|EHH26270.1| hypothetical protein EGK_16189 [Macaca mulatta]
Length = 901
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|119587473|gb|EAW67069.1| glutamate receptor, ionotrophic, AMPA 4, isoform CRA_d [Homo
sapiens]
Length = 884
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|403285589|ref|XP_003934103.1| PREDICTED: glutamate receptor 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 837
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 259/519 (49%), Gaps = 45/519 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALM 296
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALT 224
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 225 YDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV 284
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E D + +G WN + T Q + ++NRT V
Sbjct: 285 QFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIV 342
Query: 411 TSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 343 TT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDG 393
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 394 KYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 453
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 454 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|426345846|ref|XP_004040609.1| PREDICTED: glutamate receptor 2 isoform 3 [Gorilla gorilla gorilla]
gi|441619497|ref|XP_004088590.1| PREDICTED: glutamate receptor 2 [Nomascus leucogenys]
Length = 901
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|426370306|ref|XP_004052108.1| PREDICTED: glutamate receptor 4 isoform 5 [Gorilla gorilla gorilla]
Length = 902
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL ++K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRKQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|390460299|ref|XP_003732454.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2 [Callithrix
jacchus]
Length = 938
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 679 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 738
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 739 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 783
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 774 SSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
S YTANLAAFLT RM PI++ EDL+K I YG ++ GST+ FF+
Sbjct: 633 SLYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR 679
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|354476095|ref|XP_003500260.1| PREDICTED: glutamate receptor 2 isoform 2 [Cricetulus griseus]
Length = 767
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL 763
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|301767792|ref|XP_002919316.1| PREDICTED: glutamate receptor 2-like [Ailuropoda melanoleuca]
Length = 940
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|426247129|ref|XP_004017339.1| PREDICTED: glutamate receptor 2 isoform 4 [Ovis aries]
Length = 940
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|14714846|gb|AAH10574.1| GRIA2 protein [Homo sapiens]
Length = 883
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S ++ WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LVEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|194856770|ref|XP_001968822.1| GG25084 [Drosophila erecta]
gi|190660689|gb|EDV57881.1| GG25084 [Drosophila erecta]
Length = 907
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 282/584 (48%), Gaps = 65/584 (11%)
Query: 5 GIFGPNEEEVATAFEIAVRRINK-DFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
IF NE+++ +F+ A R +N F L I + + DS ++ C S
Sbjct: 36 AIFYENEKDIELSFDQAFREVNNLKFSELR----FVTIKRFMPTNDSFLLQQIACELISN 91
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH-----GVNVYPESH 118
G+AAIFGP S +I+ + IPH+E + T H VNV P
Sbjct: 92 GVAAIFGPSSKAASDIVAQIANATGIPHIEY----DLKLEATRQEHLNHQMSVNVAPSLS 147
Query: 119 LISKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLE-NAHDDDKEIRPGRPSVTIRQLP 176
++S+ +I + +W TFT+IYET + L LQ ++ A + D V +R L
Sbjct: 148 VLSRAYFEIIKTNYEWRTFTLIYETPEGLARLQDLMNIQALNSD--------YVKLRSLA 199
Query: 177 PDTDDYRPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWI 234
DDYR L KE + E ++LDC +LK + + L G ++N+ L+ L ++
Sbjct: 200 DYADDYRVLWKETDETFHEQRLILDCEPKTLKELLKVSIDFKLQGPFRNWFLTHLDTHSS 259
Query: 235 NAHTVDFQDFQPGYANITTVRM-INPTNPHIRSIMNGWIYEENERGRSLNVRA--ETVKI 291
+ +DF+ ANIT VRM + NP E ++ R NV +
Sbjct: 260 GLRDIYNEDFK---ANITAVRMKVVDANPF-----------ERKKTRLTNVDQILGNQTM 305
Query: 292 EAALMYDAVYLFA-AALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
L+YDAV LFA +A + +P P C +PS W G I N MK+I+ D +
Sbjct: 306 LPILIYDAVVLFATSARNVIAAMQPFHPPNRHCGSPSPWMLGPFIVNEMKTISEDDVEPH 365
Query: 350 INLDS----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
++ + G+R F+LE + ++ + W G+ R ++ E +
Sbjct: 366 FKTENMKLNENGQRTHFNLEIYKPTVNE--PMMVWTPDSGIKKRR----INLELESSSGT 419
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFV 459
+ +V K + V EPY M +N E Y GY+VDLI ++ L F Y+F+
Sbjct: 420 QDFSVQRKVYTV--VTHYEEPYFMMKEDHENFRGKEKYEGYAVDLIIKLSEMLEFDYEFM 477
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ N G NP+T +W+G+I +L + A + +CDLTIT RR+ VDFT+PFM LGISIL
Sbjct: 478 IVDGN--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISIL 535
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ K + F+FL+P + +VW+YM A L ++L F+AR+S
Sbjct: 536 HYKSPPAPENQFAFLQPFALEVWIYMIFAQLIMTLAFVFIARLS 579
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV RV KEKG+YAF ME+T + Y VE+NCDL Q
Sbjct: 691 SNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGEYAFLMETTSLTYNVERNCDLTQ 750
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P S + S +L +GE MKN
Sbjct: 751 IGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSE--RGELQKMKN 792
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL + ++ YG + GST F
Sbjct: 628 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHYGSMRGGSTSLF 687
Query: 819 F 819
F
Sbjct: 688 F 688
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 671 EPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M +N E Y GY+VDLI ++ L F Y+F++ N G NP+T +W+G
Sbjct: 437 EPYFMMKEDHENFRGKEKYEGYAVDLIIKLSEMLEFDYEFMIVDGN--GKYNPETKQWDG 494
Query: 725 LIGEL 729
+I +L
Sbjct: 495 IIRKL 499
>gi|403272258|ref|XP_003927990.1| PREDICTED: glutamate receptor 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 940
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|410956674|ref|XP_003984964.1| PREDICTED: glutamate receptor 2 [Felis catus]
Length = 682
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNF 818
T+ F
Sbjct: 676 TKEF 679
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|402870721|ref|XP_003899354.1| PREDICTED: glutamate receptor 2 isoform 3 [Papio anubis]
Length = 940
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|332254961|ref|XP_003276604.1| PREDICTED: glutamate receptor 1 isoform 4 [Nomascus leucogenys]
Length = 837
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 259/519 (49%), Gaps = 45/519 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALM 296
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALT 224
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 225 YDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV 284
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E D + +G WN + T Q + ++NRT V
Sbjct: 285 QFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIV 342
Query: 411 TSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 343 TT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDG 393
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 394 KYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 453
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 454 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|426370298|ref|XP_004052104.1| PREDICTED: glutamate receptor 4 isoform 1 [Gorilla gorilla gorilla]
Length = 902
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL ++K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRKQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|384381492|ref|NP_001244952.1| glutamate receptor 1 isoform 7 [Homo sapiens]
gi|332822415|ref|XP_003310975.1| PREDICTED: glutamate receptor 1 isoform 3 [Pan troglodytes]
gi|397517663|ref|XP_003829027.1| PREDICTED: glutamate receptor 1 isoform 5 [Pan paniscus]
gi|221040558|dbj|BAH11956.1| unnamed protein product [Homo sapiens]
Length = 837
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 259/519 (49%), Gaps = 45/519 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALM 296
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALT 224
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 225 YDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV 284
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E D + +G WN + T Q + ++NRT V
Sbjct: 285 QFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIV 342
Query: 411 TSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 343 TT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDG 393
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 394 KYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 453
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 454 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|441644888|ref|XP_004090626.1| PREDICTED: glutamate receptor 4 [Nomascus leucogenys]
Length = 902
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|410949415|ref|XP_003981417.1| PREDICTED: glutamate receptor 1 isoform 4 [Felis catus]
Length = 837
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 259/519 (49%), Gaps = 45/519 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALM 296
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALT 224
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 225 YDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV 284
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E D + +G WN + T Q + ++NRT V
Sbjct: 285 QFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIV 342
Query: 411 TSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 343 TT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDG 393
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 394 KYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 453
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 454 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|355567007|gb|EHH23386.1| hypothetical protein EGK_06846 [Macaca mulatta]
gi|355752594|gb|EHH56714.1| hypothetical protein EGM_06179 [Macaca fascicularis]
Length = 902
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|119625275|gb|EAX04870.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_f [Homo
sapiens]
Length = 811
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|332217593|ref|XP_003257943.1| PREDICTED: glutamate receptor 2 isoform 4 [Nomascus leucogenys]
gi|395735452|ref|XP_003776590.1| PREDICTED: glutamate receptor 2 isoform 3 [Pongo abelii]
gi|397504006|ref|XP_003822601.1| PREDICTED: glutamate receptor 2 isoform 3 [Pan paniscus]
gi|426345850|ref|XP_004040611.1| PREDICTED: glutamate receptor 2 isoform 5 [Gorilla gorilla gorilla]
gi|119625274|gb|EAX04869.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_e [Homo
sapiens]
Length = 940
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|380793105|gb|AFE68428.1| glutamate receptor 2 isoform 2 precursor, partial [Macaca mulatta]
Length = 802
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|345494030|ref|XP_001605549.2| PREDICTED: glutamate receptor, ionotropic kainate 1-like, partial
[Nasonia vitripennis]
Length = 692
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 270/539 (50%), Gaps = 57/539 (10%)
Query: 41 IVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNK 100
+ H ++ + ++ K++ N G+AAIFGP I+ +C + D+P + K
Sbjct: 103 LAGHRSSHKTPNSHKMLGNYY--GLAAIFGPHRGLASKYIQGLCDIHDLPQIVI----RK 156
Query: 101 YFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDD 160
F + + +N+YP++ + ++ M+W +FT++YE ++ + L ++L A + +
Sbjct: 157 EFY-HDRLMSINLYPDTQTLGNVYVEMVKKMNWTSFTVLYEHAEDFIALNKLLGVAKNLN 215
Query: 161 KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLM- 219
P + +L + PLL+ + ++S I++DCS +K ILKQ +EV +M
Sbjct: 216 TTDFP----IFAFRLGSGPNYSEPLLQAKEKDAKS-IVIDCSHEKLSEILKQIQEVGMMT 270
Query: 220 GDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERG 279
+YQ I SL + TVD + +Q NIT +R+++ +P ++ ++ E
Sbjct: 271 NNYQYMITSL-----DLQTVDLRPYQYSGVNITGIRILDTEDPFVQKVVG-------ENL 318
Query: 280 RSLNVRA-ETVKIEAALMYDAVYLFAAALQSL--GERKPLPTPLSCE--NPSSWQHGLGI 334
N+ + + + + ALM+DAV LFA A + L G R LS + P W+HGL +
Sbjct: 319 EQFNLPSIDKMLTQEALMFDAVALFAQAYKDLIYGYRDLKGVVLSQKYSEPQPWKHGLSM 378
Query: 335 GNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQ 394
N + TI+G+TG + LDS G R F L+ + K +G WN G +
Sbjct: 379 RNYLMYNTINGLTGPVMLDSD-GSRRRFKLDILNLHKTGLKKVGIWNPDDGFD------- 430
Query: 395 MDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMK-----NPETGELY-GYSVDLIKMI 448
++ L T+ F K+ + FQ PY MK + E + Y G+ +D+IK +
Sbjct: 431 ---------DHINLHYTTACFTKVNLCFQNAPYAMKVNFSKSLEGNDRYEGFVIDIIKEL 481
Query: 449 ANELNFTYKFVLERENTYGTLNPQT----GKWNGLIGELQEQRADLAICDLTITSERRAA 504
+ E+ F Y F ++ + G N + G++ ++ D+AI DLTIT ER A
Sbjct: 482 SAEIGFNYTFHVQEDKQNGNCNKTSEYAACTCTGMMHKILTGAMDMAITDLTITEERAAC 541
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
VDF+ F LG+SILY+KP K P LFSFL P VW+ + Y VSLL + L R+S
Sbjct: 542 VDFSTAFWNLGMSILYKKPKKAPPTLFSFLSPFDMWVWIGLVGIYALVSLLFWVLGRLS 600
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDL 799
+V RL++G WWFF LI +S+YTANLAAFLT + ++ +EDL
Sbjct: 645 SVPLRLLSGCWWFFCLIFVSTYTANLAAFLTIEKPVKVVRGIEDL 689
>gi|148683502|gb|EDL15449.1| glutamate receptor, ionotropic, AMPA2 (alpha 2), isoform CRA_c [Mus
musculus]
Length = 651
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 284/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 52 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 105
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 106 FSRGVYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 158
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 159 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 213
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 214 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 267
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 268 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 324
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 325 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 384
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 385 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 442
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 443 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 499
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 500 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 559
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 560 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 593
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 450 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 509
Query: 726 IGEL 729
+GEL
Sbjct: 510 VGEL 513
>gi|332217591|ref|XP_003257942.1| PREDICTED: glutamate receptor 2 isoform 3 [Nomascus leucogenys]
gi|426345848|ref|XP_004040610.1| PREDICTED: glutamate receptor 2 isoform 4 [Gorilla gorilla gorilla]
Length = 901
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 285/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|296193308|ref|XP_002744465.1| PREDICTED: glutamate receptor 1 isoform 4 [Callithrix jacchus]
Length = 837
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 259/519 (49%), Gaps = 45/519 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALM 296
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALT 224
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 225 YDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV 284
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E D + +G WN + T Q + ++NRT V
Sbjct: 285 QFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIV 342
Query: 411 TSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 343 TT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDG 393
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 394 KYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 453
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 454 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|119587471|gb|EAW67067.1| glutamate receptor, ionotrophic, AMPA 4, isoform CRA_b [Homo
sapiens]
Length = 902
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|109108509|ref|XP_001101031.1| PREDICTED: glutamate receptor 4 isoform 4 [Macaca mulatta]
Length = 902
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|62087764|dbj|BAD92329.1| glutamate receptor, ionotrophic variant [Homo sapiens]
Length = 801
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 57 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 116
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 117 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLI----TPS---FPTEGESQFVLQLRPSLR 169
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 170 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 222
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 223 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 276
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 277 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 328
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 329 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 388
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 389 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 446
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 447 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 497
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 498 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 557
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 558 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 599
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 647 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 706
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 707 TKEFFR 712
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 712 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 771
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VGG LDSKGYG+A P L +
Sbjct: 772 TMKVGGNLDSKGYGVATPKGSSLRR 796
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 456 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 515
Query: 726 IGEL 729
+GEL
Sbjct: 516 VGEL 519
>gi|426350714|ref|XP_004042913.1| PREDICTED: glutamate receptor 1 isoform 3 [Gorilla gorilla gorilla]
Length = 837
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 259/518 (50%), Gaps = 43/518 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D F+ AN+T +++N T+ IM W + ++ V + K +AL Y
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW--KSSDARDHTRVDWKRPKYTSALTY 225
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 226 DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQ 285
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E D + +G WN + T Q + ++NRT VT
Sbjct: 286 FN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVT 343
Query: 412 SKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 344 T---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGK 394
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 395 YGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 454
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 455 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|122063504|sp|Q38PU5.1|GRIA4_MACFA RecName: Full=Glutamate receptor 4; Short=GluR-4; Short=GluR4;
AltName: Full=AMPA-selective glutamate receptor 4;
AltName: Full=GluR-D; AltName: Full=Glutamate receptor
ionotropic, AMPA 4; Short=GluA4; Flags: Precursor
gi|76574776|gb|ABA47256.1| GluR4 [Macaca fascicularis]
Length = 902
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMM 675
M+VGG LDSKGYG+A P L L VL EP ++
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN----AVNLAVLKLNEPGLL 781
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|332208078|ref|XP_003253123.1| PREDICTED: glutamate receptor 4 isoform 2 [Nomascus leucogenys]
gi|397516380|ref|XP_003828408.1| PREDICTED: glutamate receptor 4 isoform 2 [Pan paniscus]
gi|403262904|ref|XP_003923806.1| PREDICTED: glutamate receptor 4 [Saimiri boliviensis boliviensis]
gi|256997158|dbj|BAI22772.1| glutamate receptor, ionotropic, AMPA 4 [Pan troglodytes]
Length = 902
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|218512059|sp|P48058.2|GRIA4_HUMAN RecName: Full=Glutamate receptor 4; Short=GluR-4; Short=GluR4;
AltName: Full=AMPA-selective glutamate receptor 4;
AltName: Full=GluR-D; AltName: Full=Glutamate receptor
ionotropic, AMPA 4; Short=GluA4; Flags: Precursor
gi|119587472|gb|EAW67068.1| glutamate receptor, ionotrophic, AMPA 4, isoform CRA_c [Homo
sapiens]
gi|189442366|gb|AAI67786.1| Glutamate receptor, ionotrophic, AMPA 4 [synthetic construct]
Length = 902
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|164419734|ref|NP_000820.3| glutamate receptor 4 isoform 1 precursor [Homo sapiens]
Length = 902
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLG 765
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|449484242|ref|XP_002199897.2| PREDICTED: glutamate receptor 4 isoform 2 [Taeniopygia guttata]
Length = 884
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 163/580 (28%), Positives = 280/580 (48%), Gaps = 54/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQV----SAICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ + P + +M W + R K +AL YD
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQ---REYPGSEMPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIENRTLT 409
D GRR +++++ E + + +G WN L H T+ IENRT+
Sbjct: 364 D-HYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTL----GNDTAAIENRTVV 418
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERE 463
VT+ A PY+M KN +T E GY VDL IA + YK + +
Sbjct: 419 VTTILEA---------PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPD 469
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 470 GKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 529
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 426 PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|790538|gb|AAA95962.1| GluR4 [Homo sapiens]
Length = 902
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTAPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK-----PLPTPLSCENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K + NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGKSGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMEST-GIEYEVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNDNIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|380792805|gb|AFE68278.1| glutamate receptor 4 isoform 2 precursor, partial [Macaca mulatta]
Length = 787
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|332217595|ref|XP_003257944.1| PREDICTED: glutamate receptor 2 isoform 5 [Nomascus leucogenys]
Length = 864
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 282/570 (49%), Gaps = 43/570 (7%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F ++ +AF + + + + + L P + ++E +S C+ S G
Sbjct: 12 GLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQFSRG 65
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ AIFG ++ N I S C HV +F P+ PT+G H + L +
Sbjct: 66 VYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLKGALL 118
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--Y 182
S +I WD F +Y++ L LQ VL++A + ++ ++ + + D D Y
Sbjct: 119 S-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKKDEMY 173
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVD 240
R L ++++ E ++LDC DK I+ Q + H+ G +YI++ + D
Sbjct: 174 RSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF----TDGD 227
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAALMYDA 299
Q G AN++ ++++ + + + W EE E T+K +AL YDA
Sbjct: 228 LLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSALTYDA 284
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A ++L +++ C NP+ W G+ I +K + ++G++G I D
Sbjct: 285 VQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFD 344
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+ VT+
Sbjct: 345 -QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVVVTT- 401
Query: 414 TFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
V+ + M++ E E GY VDL IA F YK + + YG + T
Sbjct: 402 ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADT 459
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 460 KIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF 519
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 520 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 549
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 662 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 721
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 722 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 766
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 597 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 656
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 657 TKEFFR 662
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 406 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 465
Query: 726 IGEL 729
+GEL
Sbjct: 466 VGEL 469
>gi|41281627|ref|NP_571969.1| glutamate receptor, ionotropic, AMPA 2a precursor [Danio rerio]
gi|33327156|gb|AAQ08956.1| AMPA receptor subunit GluR2A [Danio rerio]
Length = 875
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/579 (28%), Positives = 291/579 (50%), Gaps = 55/579 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + + L P + ++E +S C+
Sbjct: 22 VQIGGLFPRGADQEYSAFRIGMVQFG------TAEFRLTPHIDNLEVANSFAITNCFCSQ 75
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C+ HV +F P+ P +G++ + +
Sbjct: 76 FSRGVYAIFGFYDKKSVNTITSFCETL---HV-SFITPS---FPADGLNQFVLQMRPDIK 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
IS ++ W+ F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 129 GPLIS-LVEYYKWEKFAYLYDSDRGLSTLQAVLDTAAERKWQV----TAINVGNLKDEWK 183
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++N +E ++LDC DK I++Q + H+ G +YI++ + ++
Sbjct: 184 DEAYRSLFQDLENKNERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANFGF-VDG 240
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
D Q G AN++ ++++ +P + W E + + R ++ +AL
Sbjct: 241 ---DLSKIQYGGANVSGFQIVDFDDPLVAKFDQRWEALEEKEYPGADSR---IRYTSALT 294
Query: 297 YDAVYLFAAALQSLGERKPLPTPLS----C-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YDAV + A + L +++ + C NP+ W G+ I +K + +DG+TG I
Sbjct: 295 YDAVQVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNI 354
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D Q GRR ++++ +E + +G WN +++M K + N T+ +
Sbjct: 355 QFD-QYGRRVNYTVNVMELKNSGPVKIGYWNE---------MDKMAVTKSDLFPNDTMGM 404
Query: 411 TSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
+KT +L PY+M KN E E Y GY VDL IA F Y+ + +
Sbjct: 405 ENKTVIVTTIL--EAPYVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLRIVADG 462
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 463 KYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 522
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 523 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 608 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 667
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 668 TKEFFR 673
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 673 RRSKIALFDKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLLESTMNEYIEQRKPCD 732
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 733 TMKVGGNLDSKGYGIATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 777
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 418 PYVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLRIVADGKYGARDAETKIWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|119625272|gb|EAX04867.1| glutamate receptor, ionotropic, AMPA 2, isoform CRA_c [Homo
sapiens]
Length = 832
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 284/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|296216074|ref|XP_002754404.1| PREDICTED: glutamate receptor 4 [Callithrix jacchus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|261278070|dbj|BAI44621.1| AMPA-selective glutamate receptor 3 flop type [Mus musculus]
Length = 888
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 283/584 (48%), Gaps = 61/584 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIEN 405
I D+ GRR +++++ E + G WN + R V D++ EN
Sbjct: 363 NIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSSSSEN 416
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFV 459
RT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 417 RTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLS 467
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 468 IVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIM 527
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P + SFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 IKKPQKSKPGVSSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 686 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 746 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 790
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 621 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 680
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 681 TKEFFR 686
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|113912016|gb|AAI22626.1| Glutamate receptor, ionotropic, AMPA 2 [Bos taurus]
gi|296478681|tpg|DAA20796.1| TPA: glutamate receptor, ionotropic, AMPA 2 [Bos taurus]
Length = 636
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 284/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|247112|gb|AAB21763.1| glutamate receptor subunit 4c [Rattus sp.]
Length = 884
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|291383969|ref|XP_002708567.1| PREDICTED: glutamate receptor, ionotropic, AMPA 2-like isoform 2
[Oryctolagus cuniculus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L ++K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRKQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|301773952|ref|XP_002922394.1| PREDICTED: glutamate receptor 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 884
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|121435|sp|P19493.1|GRIA4_RAT RecName: Full=Glutamate receptor 4; Short=GluR-4; Short=GluR4;
AltName: Full=AMPA-selective glutamate receptor 4;
AltName: Full=GluR-D; AltName: Full=Glutamate receptor
ionotropic, AMPA 4; Short=GluA4; Flags: Precursor
gi|204400|gb|AAA41246.1| glutamate receptor (GluR-D), partial [Rattus norvegicus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYTEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|395857668|ref|XP_003801211.1| PREDICTED: glutamate receptor 4 isoform 1 [Otolemur garnettii]
Length = 884
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|335294807|ref|XP_003357317.1| PREDICTED: glutamate receptor 4 isoform 2 [Sus scrofa]
Length = 884
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVQIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|291383967|ref|XP_002708566.1| PREDICTED: glutamate receptor, ionotropic, AMPA 2-like isoform 1
[Oryctolagus cuniculus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 282/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L ++K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRKQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|153850794|gb|ABS52643.1| GRIA4 [Ambystoma tigrinum]
Length = 897
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 278/577 (48%), Gaps = 48/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 22 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 82 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 134
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W + +Y+T LQ ++E A + ++ ++ + +
Sbjct: 135 GALMS-LLDHYGWTHYVFLYDTDRGYSILQAIMEKAGQNGWQVS----AICVENF--NDA 187
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E+ ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 188 SYRRLLEDLDRRQENKFVIDCEVERLQNILEQVVSVGKHVKG--YHYIIANLGF----KD 241
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T +++N P + +M W + R K +AL YD
Sbjct: 242 ISLERFMHGGANVTGFQLVNFNTPIVTRLMQRWKKLDQ---REYPGSESPPKYTSALTYD 298
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A + L ++K C NP++ W G+ + +K + I G+TG +
Sbjct: 299 GVLVMAEAFRILRKQKIDISRRGNAGDCLANPAAPWLQGIDMERTLKQVRIQGLTGNVQF 358
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ +E S +G WN L + E + IENRT+ VT+
Sbjct: 359 D-HYGRRVNYTMDVLELKSTGPVRVGFWNDMDKLVLIQA-EPVPGNGTSAIENRTVVVTT 416
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
A PY+M KN ET E GY VDL IA + F YK + + Y
Sbjct: 417 ILEA---------PYVMFKKNHETFEGNEKFEGYCVDLASEIAKHIGFKYKIAIVPDGKY 467
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 468 GARDSDTRIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 527
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 564
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 612 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQSEIAYGTLDSGS 671
Query: 815 TRNFFK 820
T+ FFK
Sbjct: 672 TKEFFK 677
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
K S +++Y++M S M ++ PSVF K+ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 677 KRSKIAVYEKMWSYMNTAEPSVFTKTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGVATPKHSSLGN-DVNLAVLKLNEQGLLDKLKN 781
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN ET E GY VDL IA + F YK + + YG + T WNG+
Sbjct: 421 PYVMFKKNHETFEGNEKFEGYCVDLASEIAKHIGFKYKIAIVPDGKYGARDSDTRIWNGM 480
Query: 726 IGEL 729
+GEL
Sbjct: 481 VGEL 484
>gi|148677379|gb|EDL09326.1| glutamate receptor, ionotropic, AMPA4 (alpha 4), isoform CRA_b [Mus
musculus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|45382593|ref|NP_990545.1| glutamate receptor, ionotrophic, AMPA 4 isoform 2 precursor [Gallus
gallus]
gi|987866|emb|CAA61678.1| AMPA receptor GluR4/D [Gallus gallus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 285/585 (48%), Gaps = 64/585 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ + P + +M W + L+ R +ET K +
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIE 404
G + D GRR +++++ E + + +G WN L H T+ +E
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTL----GNDTSAME 413
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKF 458
NRT+ VT+ A PY+M KN +T E GY VDL IA + YK
Sbjct: 414 NRTVVVTTILEA---------PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKI 464
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI
Sbjct: 465 AIVPDGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSPLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 426 PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|164419753|ref|NP_001106651.1| glutamate receptor 4 isoform 2 precursor [Mus musculus]
Length = 902
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|348532528|ref|XP_003453758.1| PREDICTED: glutamate receptor 4-like isoform 1 [Oreochromis
niloticus]
Length = 905
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/577 (27%), Positives = 286/577 (49%), Gaps = 48/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 28 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + +
Sbjct: 88 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFTLQLRPSIR 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ DW+ F +Y+T LQ ++E A ++ ++ ++ + +
Sbjct: 141 GALLS-LLDHYDWNKFVFLYDTDRGYAILQAIMEKAGQNNWQVS----AICVENF--NDA 193
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
+YR LL+++ E ++D ++ +++Q V H+ G +YI++ +
Sbjct: 194 NYRRLLEDLDRRQEKKFVIDVEAERLQNMMEQIVSVGKHVKG--YHYIMANLGF----KD 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
++ + F G AN+T ++++ +NP + +M W + R K +AL YD
Sbjct: 248 INLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDAPPKYTSALTYD 304
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + + G+TG +
Sbjct: 305 GVMVMAEAFRNLRRQKVDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNVQF 364
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E ++ + +G WN A L + + + +ENRT+ VT+
Sbjct: 365 D-HYGRRVNYTMDVFELKNNGPRRIGYWNDADKLVLIQDSPLLPNDT-SGMENRTVVVTT 422
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
+ +G PY+M KN E E GY VDL IA + YK + + Y
Sbjct: 423 --------IMEG-PYVMLKKNWEMYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKY 473
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 533
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWGYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSQL-RSAVNLAVLKLNEQGLLDKLKN 788
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 427 PYVMLKKNWEMYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNGM 486
Query: 726 IGEL 729
+GEL
Sbjct: 487 VGEL 490
>gi|335294809|ref|XP_003129869.2| PREDICTED: glutamate receptor 4 isoform 1 [Sus scrofa]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVQIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|202874|gb|AAA63481.1| AMPA selective glutamate receptor, partial [Rattus norvegicus]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYTEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|164419768|ref|NP_001106657.1| glutamate receptor, ionotrophic, AMPA 4 isoform 1 precursor [Gallus
gallus]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 285/585 (48%), Gaps = 64/585 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYEWNRFVFLYDTDRGYSILQAIMEKAGQNSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYIVANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ + P + +M W + L+ R +ET K +
Sbjct: 247 ISLERFMHGGANVTGFQLVDFSTPMVTKLMQRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIE 404
G + D GRR +++++ E + + +G WN L H T+ +E
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTL----GNDTSAME 413
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKF 458
NRT+ VT+ A PY+M KN +T E GY VDL IA + YK
Sbjct: 414 NRTVVVTTILEA---------PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKI 464
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI
Sbjct: 465 AIVPDGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYG+A P
Sbjct: 742 TMKVGGNLDSKGYGVATP 759
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 426 PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|164419763|ref|NP_001106655.1| glutamate receptor 4 isoform 2 precursor [Rattus norvegicus]
gi|149030160|gb|EDL85231.1| glutamate receptor, ionotropic, 4, isoform CRA_b [Rattus
norvegicus]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|74180571|dbj|BAE34208.1| unnamed protein product [Mus musculus]
Length = 624
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/581 (28%), Positives = 285/581 (49%), Gaps = 55/581 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F N + +AF AV+ N + L V H+++ +S C+
Sbjct: 28 ISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 88 FSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRPA-- 138
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R I+ D
Sbjct: 139 -LKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGNIK----D 192
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWIN 235
++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 193 IQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF--- 246
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAA 294
+ + G ANIT +++N NP ++ + W+ +E E + N +K +A
Sbjct: 247 -TDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTSA 302
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTG 348
L +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 303 LTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTG 362
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D+ GRR +++++ E + G WN + R V D++ I N +
Sbjct: 363 NIQFDT-YGRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQ----ISNDSS 412
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLER 462
+ ++T +L PY+M KN E E Y GY VDL IA + YK +
Sbjct: 413 SSGNRTIVVTTIL--ESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVG 470
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 471 DGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKK 530
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 571
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 428 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 487
Query: 726 IGEL 729
+GEL
Sbjct: 488 VGEL 491
>gi|195385439|ref|XP_002051413.1| GJ15538 [Drosophila virilis]
gi|194147870|gb|EDW63568.1| GJ15538 [Drosophila virilis]
Length = 908
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 289/584 (49%), Gaps = 63/584 (10%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF NE+E+ +F+ A R +N + K D+ I +++ DS ++ C S G
Sbjct: 32 AIFYENEKEIEMSFDQAFREVN-NLKF--SDLQFLTIKRYMPTNDSFQLQQIACELISNG 88
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH-----GVNVYPESHL 119
+AAIFGP S +I+ + IPH+E W T H +NV P
Sbjct: 89 VAAIFGPSSKAASDIVAQIANTTGIPHIEYDWK----LEATRQEHLNHQMTINVAPSLSA 144
Query: 120 ISKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+S+ +I + +W TFT+IYET + L LQ ++ N H + + + +R L
Sbjct: 145 LSRAYFEIIKTNYEWRTFTLIYETPEGLARLQDLM-NIHALNTDY------LKLRNLADY 197
Query: 179 TDDYRPLLKEIKNSSESH-ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+DYR L KE + H I+LDC +LK + + L G ++N+ L+ ++ H
Sbjct: 198 AEDYRVLWKEADETFHEHRIILDCEPKSLKELLKISVDFKLQGPFRNWFLTH----LDTH 253
Query: 238 TVDFQDF--QPGYANITTVRM--INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
+ +D + ANIT+VR+ ++P NP+ R + R ++ + +
Sbjct: 254 SSGLKDIYNEDFKANITSVRLKTVDP-NPYER---------KKTRITKVDQILGSQMMLP 303
Query: 294 ALMYDAVYLFAAA----LQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
L+YDAV LFA + + S+ + P + ++W G I MK+I+ D +
Sbjct: 304 VLIYDAVVLFANSARNVIASMEQFYPPNSHCGLGYGNTWIMGGHIVQEMKTISEDDVEPH 363
Query: 350 INLDS----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
++ + G+R F+LE + ++ L W G+ + +++ E +
Sbjct: 364 FKTENMKINEYGQRTHFNLEIYKPTVNE--PLMVWTPDNGIK----IRRLNPELESSAAT 417
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFV 459
+V K + V EPY M +N E Y GY+VDLI+ ++ + F Y+F+
Sbjct: 418 PDFSVQRKVYTV--VTHHEEPYFMMKQDHENYRGQEKYEGYAVDLIRKLSELMEFDYEFM 475
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
+ N G NP+T +W+G+I +L + A + +CDLTIT RR+AVDFT+PFM LGISIL
Sbjct: 476 IVNGN--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQLRRSAVDFTVPFMQLGISIL 533
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ K +Q + F+FLEP + +VW+YM A L ++L +AR+S
Sbjct: 534 HYKSPPEQKNPFAFLEPFAPEVWIYMIFAQLVMTLAFVLIARLS 577
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV+RV KEKG YAF ME+T + Y +E++CDL Q
Sbjct: 689 SNDTDYQRAWNQMKGFNPSAFTSNNKEGVDRVRKEKGNYAFLMETTSMTYNIERHCDLRQ 748
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+GG + K YG+A+P + + + L++ +GE Y +KN
Sbjct: 749 IGGQIGEKHYGLAVPLGADY-RTNLSVSILQLSEKGELYKLKN 790
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL + +K+G + GST F
Sbjct: 626 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSTIKSLQDLIEQDEVKFGSMRGGSTSLF 685
Query: 819 F 819
F
Sbjct: 686 F 686
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 666 VLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 719
V EPY M +N E Y GY+VDLI+ ++ + F Y+F++ N G NP+T
Sbjct: 430 VTHHEEPYFMMKQDHENYRGQEKYEGYAVDLIRKLSELMEFDYEFMIVNGN--GKYNPET 487
Query: 720 GKWNGLIGEL 729
+W+G+I +L
Sbjct: 488 KQWDGIIRKL 497
>gi|164419761|ref|NP_058959.2| glutamate receptor 4 isoform 1 precursor [Rattus norvegicus]
gi|149030159|gb|EDL85230.1| glutamate receptor, ionotropic, 4, isoform CRA_a [Rattus
norvegicus]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|327269187|ref|XP_003219376.1| PREDICTED: glutamate receptor 4-like isoform 1 [Anolis
carolinensis]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/580 (28%), Positives = 274/580 (47%), Gaps = 54/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFTLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLQ 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S ++ W F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLGHYKWSRFVFLYDTDRGYSILQAIMETAGEKSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YIL+ +
Sbjct: 193 SYRQLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYILANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ F G AN+T ++++ P + +M W + R K +AL YD
Sbjct: 247 ISLDRFMHGGANVTGFQLVDFDTPMVAKLMQRWKKLDQ---REYPGSESPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWSQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIENRTLT 409
D GRR ++S++ E S + +G WN L H T+ +ENRT+
Sbjct: 364 D-HYGRRVNYSMDVFELKSTGPRKIGYWNDMDKLVLIQHEPTL----GNDTSALENRTVV 418
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ A PY+M KN E E Y GY VDL IA + YK + +
Sbjct: 419 VTTIMEA---------PYVMWKKNRELFDGNEKYEGYCVDLASEIAKHIGIKYKIAIVPD 469
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 470 GKYGARDPNTKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 529
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M ++ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWAYMSTTDPSVFARTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P T WNG+
Sbjct: 426 PYVMWKKNRELFDGNEKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPNTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|395857670|ref|XP_003801212.1| PREDICTED: glutamate receptor 4 isoform 2 [Otolemur garnettii]
Length = 902
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|395528478|ref|XP_003766356.1| PREDICTED: glutamate receptor, ionotropic kainate 5 [Sarcophilus
harrisii]
Length = 957
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 290/584 (49%), Gaps = 61/584 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSS--- 98
Query: 77 RNIIES-MCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
R +++ +C + IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 99 RGRVQTVLCPLLQIPHIKEGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 155
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L ++ D PLLKEI++
Sbjct: 156 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-ESRDPTPLLKEIRDDK 207
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + ILK+A E+ + + YIL+ + I + +NI
Sbjct: 208 VSTIIIDANASISHLILKKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 263
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN A + AALM+DAV++ +A++
Sbjct: 264 FSMFNTSHPFYLEFVRSLNMSW--RENCEASMYPGPA----LSAALMFDAVHVVVSAVRE 317
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 318 LNRSQEIGVKPLACTSSNIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 376
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ + +G W N +N + +D + + N+TL VT+ P
Sbjct: 377 KSREGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 423
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F ++ L + YG P G W G++
Sbjct: 424 YVMRRPNFQSLSGNERFEGFCVDMLRELAELLRFRFRLRLVEDGLYGAPEPN-GSWTGMV 482
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 483 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 542
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF A +S Y N + L R H
Sbjct: 543 VWLFMLLAYLAVSCVLFLAATLSP-----YEWYNPHPCLRARPH 581
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 666 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 722
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 723 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 767
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 611 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 670
Query: 815 TRNFFK 820
T FF+
Sbjct: 671 TMTFFQ 676
>gi|395857672|ref|XP_003801213.1| PREDICTED: glutamate receptor 4 isoform 3 [Otolemur garnettii]
Length = 902
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|4210479|dbj|BAA74538.1| glutamate receptor channel alpha4 subunit [Mus musculus]
Length = 902
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWF TLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFGTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|449276069|gb|EMC84761.1| Glutamate receptor 2 [Columba livia]
Length = 880
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 262/529 (49%), Gaps = 55/529 (10%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
K +C+ S G+ AIFG ++ N I S C + +F P+ PT+G H +
Sbjct: 72 KRVCSQFSRGVFAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQ 124
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
L +S +I W F +Y++ L LQ VL++A + ++ ++ +
Sbjct: 125 MRPDLKGALLS-LIEYYQWTKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGN 179
Query: 175 LPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLT 230
+ D D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++
Sbjct: 180 INNDRKDETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANL 237
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETV 289
+ D Q G AN++ ++++ +P + + W EE E T+
Sbjct: 238 GF----TDGDLSKIQFGGANVSGFQIVDYDDPLVSKFIQRWSTLEEKEYP---GAHTSTI 290
Query: 290 KIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITI 343
K +AL YDAV + A ++L +++ C NP+ W HG+ I +K + +
Sbjct: 291 KYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQV 350
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKK 400
+G+TG I D Q G+R +F++ +E S + +G W+ V +D +
Sbjct: 351 EGLTGNIKFD-QNGKRINFTINVMELKSTGPRKIGYWSEV----DKMVVNPLDGPLGNES 405
Query: 401 EKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNF 454
+EN+T+ VT+ PY+M KN E E GY VDL IA F
Sbjct: 406 SGLENKTIIVTT---------ILESPYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGF 456
Query: 455 TYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTL 514
YK + + YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+L
Sbjct: 457 KYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSL 516
Query: 515 GISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
GISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 517 GISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M+S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 678 RRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 737
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 738 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 782
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 613 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 672
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 673 TKEFFR 678
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA F YK + + YG + T WNG+
Sbjct: 422 PYVMMKKNHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|301773950|ref|XP_002922393.1| PREDICTED: glutamate receptor 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 902
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|348532530|ref|XP_003453759.1| PREDICTED: glutamate receptor 4-like isoform 2 [Oreochromis
niloticus]
Length = 905
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 285/577 (49%), Gaps = 48/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 28 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + + PT G + +
Sbjct: 88 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLITPSF-------PTEGESQFTLQLRPSIR 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ DW+ F +Y+T LQ ++E A ++ ++ ++ + +
Sbjct: 141 GALLS-LLDHYDWNKFVFLYDTDRGYAILQAIMEKAGQNNWQVS----AICVENF--NDA 193
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
+YR LL+++ E ++D ++ +++Q V H+ G +YI++ +
Sbjct: 194 NYRRLLEDLDRRQEKKFVIDVEAERLQNMMEQIVSVGKHVKG--YHYIMANLGF----KD 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
++ + F G AN+T ++++ +NP + +M W + R K +AL YD
Sbjct: 248 INLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDAPPKYTSALTYD 304
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + + G+TG +
Sbjct: 305 GVMVMAEAFRNLRRQKVDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNVQF 364
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E ++ + +G WN A L + + + +ENRT+ VT+
Sbjct: 365 D-HYGRRVNYTMDVFELKNNGPRRIGYWNDADKLVLIQDSPLLPNDT-SGMENRTVVVTT 422
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
+ +G PY+M KN E E GY VDL IA + YK + + Y
Sbjct: 423 --------IMEG-PYVMLKKNWEMYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKY 473
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 GARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 533
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWGYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYG+A P
Sbjct: 744 TMKVGGNLDSKGYGVATP 761
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 427 PYVMLKKNWEMYEGNDQYEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNGM 486
Query: 726 IGEL 729
+GEL
Sbjct: 487 VGEL 490
>gi|327269189|ref|XP_003219377.1| PREDICTED: glutamate receptor 4-like isoform 2 [Anolis
carolinensis]
Length = 902
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/580 (28%), Positives = 274/580 (47%), Gaps = 54/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFTLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLQ 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S ++ W F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLGHYKWSRFVFLYDTDRGYSILQAIMETAGEKSWQVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ +L+Q V H+ G +YIL+ +
Sbjct: 193 SYRQLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKG--YHYILANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ F G AN+T ++++ P + +M W + R K +AL YD
Sbjct: 247 ISLDRFMHGGANVTGFQLVDFDTPMVAKLMQRWKKLDQ---REYPGSESPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A ++L +K C NP++ W G+ + +K + I G+TG +
Sbjct: 304 GVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWSQGIDMERTLKQVRIQGLTGNVQF 363
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIENRTLT 409
D GRR ++S++ E S + +G WN L H T+ +ENRT+
Sbjct: 364 D-HYGRRVNYSMDVFELKSTGPRKIGYWNDMDKLVLIQHEPTL----GNDTSALENRTVV 418
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERE 463
VT+ A PY+M KN E E Y GY VDL IA + YK + +
Sbjct: 419 VTTIMEA---------PYVMWKKNRELFDGNEKYEGYCVDLASEIAKHIGIKYKIAIVPD 469
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 470 GKYGARDPNTKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 529
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M ++ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWAYMSTTDPSVFARTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P T WNG+
Sbjct: 426 PYVMWKKNRELFDGNEKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPNTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|261278074|dbj|BAI44623.1| AMPA-selective glutamate receptor 4 flop type [Mus musculus]
Length = 902
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KELDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|73978351|ref|XP_539784.2| PREDICTED: glutamate receptor 2 [Canis lupus familiaris]
Length = 895
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 273/547 (49%), Gaps = 37/547 (6%)
Query: 28 DFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMF 87
D AL + LEP + +L L+C+ S G+ AIFG ++ N I S C
Sbjct: 3 DRIALTRSLNLEPNSSPIVRRVALDKCNLVCSQFSRGVYAIFGFYDKKSVNTITSFCGTL 62
Query: 88 DIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLV 147
HV +F P+ PT+G H + L +S +I WD F +Y++ L
Sbjct: 63 ---HV-SFITPS---FPTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLS 114
Query: 148 YLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESHILLDCSMDK 205
LQ VL++A + ++ ++ + + D D YR L ++++ E ++LDC DK
Sbjct: 115 TLQAVLDSAAEKKWQV----TAINVGNINNDKKDETYRSLFQDLELKKERRVILDCERDK 170
Query: 206 TVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH 263
I+ Q + H+ G +YI++ + D Q G AN++ ++++ +
Sbjct: 171 VNDIVDQVITIGKHVKG--YHYIIANLGF----TDGDLLKIQFGGANVSGFQIVDYDDSL 224
Query: 264 IRSIMNGW-IYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPT 318
+ + W EE E T+K +AL YDAV + A ++L +++
Sbjct: 225 VSKFIERWSTLEEKEYP---GAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGN 281
Query: 319 PLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV 376
C NP+ W G+ I +K + ++G++G I D Q G+R ++++ +E ++ +
Sbjct: 282 AGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFD-QNGKRINYTINIMELKTNGPRK 340
Query: 377 LGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGE 436
+G W+ + + T E +EN+T+ VT+ V+ + M++ E E
Sbjct: 341 IGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE 398
Query: 437 LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLT 496
GY VDL IA F YK + + YG + T WNG++GEL +AD+AI LT
Sbjct: 399 --GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLT 456
Query: 497 ITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLL 556
IT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++L
Sbjct: 457 ITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVL 516
Query: 557 FFLARIS 563
F ++R S
Sbjct: 517 FLVSRFS 523
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 636 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 695
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 696 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 740
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 571 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 630
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 631 TKEFFR 636
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 380 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 439
Query: 726 IGEL 729
+GEL
Sbjct: 440 VGEL 443
>gi|358413240|ref|XP_002704933.2| PREDICTED: glutamate receptor 1 [Bos taurus]
Length = 837
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 259/519 (49%), Gaps = 45/519 (8%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AIFG N++ S C + F P+ + + T+ + + PE
Sbjct: 6 CSQFSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE- 59
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + II+ W F IY+ L LQ+VL+ A + + ++ + L
Sbjct: 60 --LQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTT 111
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ YR L ++++ E +++DC ++ IL Q ++ G +YIL+ +
Sbjct: 112 TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----M 167
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALM 296
+D F+ AN+T +++N T+ IM W +N R V + K +AL
Sbjct: 168 DIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALT 224
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A Q+L ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 225 YDGVKVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV 284
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
+ + GRR +++L +E D + +G WN + T Q + ++NRT V
Sbjct: 285 QFN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIV 342
Query: 411 TSKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLEREN 464
T+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 343 TT---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDG 393
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 394 KYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQ 453
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 454 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 492
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 540 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 599
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 600 TKEFFR 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 605 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 664
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 665 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 709
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 348 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 407
Query: 725 LIGEL 729
++GEL
Sbjct: 408 MVGEL 412
>gi|341940773|sp|Q9Z2W8.2|GRIA4_MOUSE RecName: Full=Glutamate receptor 4; Short=GluR-4; Short=GluR4;
AltName: Full=AMPA-selective glutamate receptor 4;
AltName: Full=GluR-D; AltName: Full=Glutamate receptor
ionotropic, AMPA 4; Short=GluA4; Flags: Precursor
gi|38173722|gb|AAH60697.1| Glutamate receptor, ionotropic, AMPA4 (alpha 4) [Mus musculus]
gi|68563412|dbj|BAE06154.1| AMPA-selective glutamate receptor 4 (GluR-4) flip [Mus musculus]
Length = 902
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|164419751|ref|NP_062665.3| glutamate receptor 4 isoform 1 precursor [Mus musculus]
Length = 902
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 676
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 677 TKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSLG 765
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|410914136|ref|XP_003970544.1| PREDICTED: glutamate receptor 1-like isoform 1 [Takifugu rubripes]
Length = 920
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/569 (27%), Positives = 273/569 (47%), Gaps = 40/569 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F P E F A+ ++D L P V V+ +S C+
Sbjct: 27 INIGGLF-PTESHEYEVFRFALSH-HQDIPKLVPQ------VDMVKMGNSFSMTYAFCSQ 78
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AI G + N++ S C + F P+ + I T + + PE +
Sbjct: 79 FSKGVYAIIGLYDRKTVNMLTSFCGALHV----CFITPS-FPIETANQFVIQLRPE---L 130
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F +Y + L LQ+VL+ A + D + SV + + +
Sbjct: 131 QDALVGVIEHYGWTKFVYMYSSDSGLSVLQKVLDTAAERDWLV----TSVNVETMTEAS- 185
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+ + +++ E I++DC ++ ILK+ E +YIL+ + +D
Sbjct: 186 -FLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQGKNAKSYHYILANLGFL----DID 240
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
D + G ANIT +++N ++P + ++ W+ +N + + +K AL YD V
Sbjct: 241 LTDLRKGGANITGFQLVNNSDPTVSRVVQQWMEFDN---KDTKMPKSGLKYTGALTYDGV 297
Query: 301 YLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ + A Q+L R+ P+ W G+ I ++ + IDG+TG I +
Sbjct: 298 KVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR ++++ +E K +G WN ++ + + ++NRT VT+
Sbjct: 357 EKGRRTNYTVSIMELAPSGPKKVGYWNEEEKYVNTAVFVRGSNDTY-GLQNRTYIVTTIL 415
Query: 415 FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
+ +L + ++ N + GY V+L IA + + YK L + YG +P+
Sbjct: 416 ESPYVMLKKNHEQLVGNDK---YEGYIVELAAEIAKHVGYQYKLKLVSDGKYGARDPEIK 472
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL
Sbjct: 473 MWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFL 532
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 533 DPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 9/98 (9%)
Query: 730 QEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAA 782
QEQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAA
Sbjct: 604 QEQSNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAA 661
Query: 783 FLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
FLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 FLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 699
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 699 RRSKIAVFEKMWSYMKAADPSVFVRTTDEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCD 758
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 759 TMKVGGNLDSKGYGIATP 776
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK L + YG +P+ WNG+
Sbjct: 418 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKLVSDGKYGARDPEIKMWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|410914138|ref|XP_003970545.1| PREDICTED: glutamate receptor 1-like isoform 2 [Takifugu rubripes]
Length = 920
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/569 (27%), Positives = 273/569 (47%), Gaps = 40/569 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F P E F A+ ++D L P V V+ +S C+
Sbjct: 27 INIGGLF-PTESHEYEVFRFALSH-HQDIPKLVPQ------VDMVKMGNSFSMTYAFCSQ 78
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AI G + N++ S C + F P+ + I T + + PE +
Sbjct: 79 FSKGVYAIIGLYDRKTVNMLTSFCGALHV----CFITPS-FPIETANQFVIQLRPE---L 130
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F +Y + L LQ+VL+ A + D + SV + + +
Sbjct: 131 QDALVGVIEHYGWTKFVYMYSSDSGLSVLQKVLDTAAERDWLV----TSVNVETMTEAS- 185
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+ + +++ E I++DC ++ ILK+ E +YIL+ + +D
Sbjct: 186 -FLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQGKNAKSYHYILANLGFL----DID 240
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
D + G ANIT +++N ++P + ++ W+ +N + + +K AL YD V
Sbjct: 241 LTDLRKGGANITGFQLVNNSDPTVSRVVQQWMEFDN---KDTKMPKSGLKYTGALTYDGV 297
Query: 301 YLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ + A Q+L R+ P+ W G+ I ++ + IDG+TG I +
Sbjct: 298 KVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFN- 356
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR ++++ +E K +G WN ++ + + ++NRT VT+
Sbjct: 357 EKGRRTNYTVSIMELAPSGPKKVGYWNEEEKYVNTAVFVRGSNDTY-GLQNRTYIVTTIL 415
Query: 415 FAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
+ +L + ++ N + GY V+L IA + + YK L + YG +P+
Sbjct: 416 ESPYVMLKKNHEQLVGNDK---YEGYIVELAAEIAKHVGYQYKLKLVSDGKYGARDPEIK 472
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL
Sbjct: 473 MWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFL 532
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 533 DPLAYEIWMCIVFAYIGVSVVLFLVSRFS 561
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 9/98 (9%)
Query: 730 QEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAA 782
QEQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAA
Sbjct: 604 QEQSNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAA 661
Query: 783 FLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
FLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 FLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 699
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 699 RRSKIAVFEKMWSYMKAADPSVFVRTTDEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCD 758
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 759 TMKVGGNLDSKGYGIATP 776
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK L + YG +P+ WNG+
Sbjct: 418 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKLVSDGKYGARDPEIKMWNGM 477
Query: 726 IGEL 729
+GEL
Sbjct: 478 VGEL 481
>gi|432960980|ref|XP_004086523.1| PREDICTED: glutamate receptor 2-like isoform 2 [Oryzias latipes]
Length = 879
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 287/576 (49%), Gaps = 49/576 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + F L + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQ----FGTL--EFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N I S C + + + D N+ FI + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGNQQFI-------IQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAEKKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I+ Q + H+ G +YI++ + +
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMDQVITIGRHVKG--YHYIIANLGF-V 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E ++ +G WN + ++ E + +EN+T+
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKNNGPVKIGYWNEVDKMVLTKLGEPSNDTTG--MENKTV 413
Query: 409 TVTSKTFAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
VT+ A +L + + N E Y GY VDL IA F Y+ + + YG
Sbjct: 414 IVTTILEAPYVMLKKNADLFVDN----ERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYG 469
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 470 ARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 529
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M S+ PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMRSAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 781
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 612 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 671
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 672 TKEFFR 677
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|410972145|ref|XP_003992521.1| PREDICTED: glutamate receptor, ionotropic kainate 4 [Felis catus]
Length = 915
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 274/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++ +
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQSQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLERLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|348542523|ref|XP_003458734.1| PREDICTED: glutamate receptor 1-like [Oreochromis niloticus]
Length = 960
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 279/572 (48%), Gaps = 54/572 (9%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F P + F A+ + N+D L P V V+ S C+ S+G
Sbjct: 45 GLF-PGDSHEYEVFRFALAQ-NQDIPKLVPQ------VDMVDTSSSFAMTYAFCSQFSKG 96
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ AI G N++ S C + F P+ + + TN + + P+ + + +
Sbjct: 97 VYAIMGLYDRRTVNMLMSFCGSLHV----CFVTPS-FPVQTNNQFVLQLRPQ---LQEPL 148
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRP 184
++ W F +Y + L LQ++L+ A + ++ SV + L +
Sbjct: 149 MALLEHFYWTRFVYMYSSDSGLAVLQRILDTAAERSWQVT----SVNLDSLTEPA--FIK 202
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQ-AKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
LL ++ + I++DC + + IL A + + +Y +YIL+ + ++ + +FQ
Sbjct: 203 LLADLDYKKDFQIIIDCELKRLNYILNLIAAQKRNLKNY-HYILANLGF-LDLNVTEFQK 260
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
P N+T +++N ++P ++ I W+ +N + L V +K AL YD V +
Sbjct: 261 LGP---NVTGFQLVNRSDPAVQKINQNWLDFDN---KDLKVARRRLKYTGALTYDGVSVM 314
Query: 304 AAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
A A Q+L R+ P+ W G+ I ++ + ++G+TG + D + G
Sbjct: 315 ATAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRLEGLTGHVQFDER-G 373
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
R +++L +E + +G WN G ++ M +E+ ++N+T VT+ A
Sbjct: 374 HRTNYTLTVMELSHIGPRKIGFWNEKRGYVNTAIYRPM-QEEFYNVQNKTYIVTTILEA- 431
Query: 418 LRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PYMM KN E + GY +L IA + FTY+ L + YG +P
Sbjct: 432 --------PYMMLKKNHEQFLGNDKYEGYCAELAAEIAKHVGFTYRLELVGDGKYGARDP 483
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+T WNG++GEL +AD+A+ LTIT R +DFT PFM+LGISI+ +KP K +P +F
Sbjct: 484 ETKMWNGMVGELVYGKADMAVAPLTITLVREQVIDFTKPFMSLGISIMIKKPTKSKPGVF 543
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 544 SFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 575
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 658 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGG 717
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 718 STKEFFR 724
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M S+ PSVFVKS EGV RV K KGKYA+ +ES+ EY E K CD
Sbjct: 724 RRSKIAVFEKMWSYMRSADPSVFVKSTSEGVIRVRKSKGKYAYLLESSMNEYIEQRKPCD 783
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYG+A P
Sbjct: 784 TMKVGGNLDSKGYGVATP 801
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PYMM KN E + GY +L IA + FTY+ L + YG +P+T WNG+
Sbjct: 432 PYMMLKKNHEQFLGNDKYEGYCAELAAEIAKHVGFTYRLELVGDGKYGARDPETKMWNGM 491
Query: 726 IGEL 729
+GEL
Sbjct: 492 VGEL 495
>gi|26327421|dbj|BAC27454.1| unnamed protein product [Mus musculus]
Length = 858
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 8 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 67
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 68 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 120
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 121 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 173
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 174 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 227
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 228 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 279
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 280 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 339
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + IENRT
Sbjct: 340 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTLGNDTA-AIENRT 397
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 398 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 448
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 449 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 508
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 509 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 550
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 598 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 657
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 658 TKEFFR 663
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 663 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 722
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 723 TMKVGGNLDSKGYGVATPKGSSL 745
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 407 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 466
Query: 726 IGEL 729
+GEL
Sbjct: 467 VGEL 470
>gi|332217597|ref|XP_003257945.1| PREDICTED: glutamate receptor 2 isoform 6 [Nomascus leucogenys]
gi|395735454|ref|XP_003776591.1| PREDICTED: glutamate receptor 2 isoform 4 [Pongo abelii]
gi|395735456|ref|XP_003776592.1| PREDICTED: glutamate receptor 2 isoform 5 [Pongo abelii]
gi|397504008|ref|XP_003822602.1| PREDICTED: glutamate receptor 2 isoform 4 [Pan paniscus]
gi|397504010|ref|XP_003822603.1| PREDICTED: glutamate receptor 2 isoform 5 [Pan paniscus]
gi|402870723|ref|XP_003899355.1| PREDICTED: glutamate receptor 2 isoform 4 [Papio anubis]
gi|402870725|ref|XP_003899356.1| PREDICTED: glutamate receptor 2 isoform 5 [Papio anubis]
gi|403272260|ref|XP_003927991.1| PREDICTED: glutamate receptor 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403272262|ref|XP_003927992.1| PREDICTED: glutamate receptor 2 isoform 5 [Saimiri boliviensis
boliviensis]
gi|426345852|ref|XP_004040612.1| PREDICTED: glutamate receptor 2 isoform 6 [Gorilla gorilla gorilla]
Length = 836
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 269/537 (50%), Gaps = 37/537 (6%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P + ++E +S C+ S G+ AIFG ++ N I S C HV +F
Sbjct: 11 LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFIT 66
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ PT+G H + L +S +I WD F +Y++ L LQ VL++A
Sbjct: 67 PS---FPTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAA 122
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKE 215
+ ++ ++ + + D D YR L ++++ E ++LDC DK I+ Q
Sbjct: 123 EKKWQV----TAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVIT 178
Query: 216 V--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-I 272
+ H+ G +YI++ + D Q G AN++ ++++ + + + W
Sbjct: 179 IGKHVKG--YHYIIANLGF----TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWST 232
Query: 273 YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS- 326
EE E T+K +AL YDAV + A ++L +++ C NP+
Sbjct: 233 LEEKEYP---GAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAV 289
Query: 327 SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL 386
W G+ I +K + ++G++G I D Q G+R ++++ +E ++ + +G W+ +
Sbjct: 290 PWGQGVEIERALKQVQVEGLSGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKM 348
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIK 446
+ T E +EN+T+ VT+ V+ + M++ E E GY VDL
Sbjct: 349 VVTLT-ELPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAA 404
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA F YK + + YG + T WNG++GEL +AD+AI LTIT R +D
Sbjct: 405 EIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVID 464
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 465 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 521
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 634 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 693
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 694 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 738
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 569 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 628
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 629 TKEFFR 634
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 378 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 437
Query: 726 IGEL 729
+GEL
Sbjct: 438 VGEL 441
>gi|432960978|ref|XP_004086522.1| PREDICTED: glutamate receptor 2-like isoform 1 [Oryzias latipes]
Length = 897
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 287/576 (49%), Gaps = 49/576 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF I + + F L + L P + ++E +S C+
Sbjct: 26 VQIGGLFPRGADQEYSAFRIGMVQ----FGTL--EFRLTPHIDNLEVANSFAVTNCFCSQ 79
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N I S C + + + D N+ FI + + P+
Sbjct: 80 FSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGNQQFI-------IQMRPD-- 130
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +I WD F +Y++ L LQ VL+ A + ++ ++ + L +
Sbjct: 131 -IKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAEKKWQV----TAINVGNLKDE 185
Query: 179 TDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWI 234
D YR L ++++N E ++LDC DK I+ Q + H+ G +YI++ + +
Sbjct: 186 RKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMDQVITIGRHVKG--YHYIIANLGF-V 242
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+ D Q G AN++ ++++ +P + W E + + + ++ +A
Sbjct: 243 DG---DLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSA 296
Query: 295 LMYDAVYLFAAALQSLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTG 348
L YDAV + A + L +++ T NP+ W G+ I +K + ++G+TG
Sbjct: 297 LTYDAVQVMTEAFRYLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTG 356
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
I D Q G+R ++S+ +E ++ +G WN + ++ E + +EN+T+
Sbjct: 357 NIQFD-QHGKRVNYSVNIMELKNNGPVKIGYWNEVDKMVLTKLGEPSNDTTG--MENKTV 413
Query: 409 TVTSKTFAKLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYG 467
VT+ A +L + + N E Y GY VDL IA F Y+ + + YG
Sbjct: 414 IVTTILEAPYVMLKKNADLFVDN----ERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYG 469
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
+ +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +
Sbjct: 470 ARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSK 529
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 PGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M S+ PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 677 RRSKIALFDKMWTYMRSAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 737 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 781
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 727 GELQEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTAN 779
G++Q T S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTAN
Sbjct: 577 GQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 636
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LAAFLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 637 LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFR 677
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 422 PYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|134304851|ref|NP_001077089.1| glutamate receptor 2 isoform 3 [Homo sapiens]
Length = 836
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 269/537 (50%), Gaps = 37/537 (6%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P + ++E +S C+ S G+ AIFG ++ N I S C HV +F
Sbjct: 11 LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFIT 66
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ PT+G H + L +S +I WD F +Y++ L LQ VL++A
Sbjct: 67 PS---FPTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAA 122
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKE 215
+ ++ ++ + + D D YR L ++++ E ++LDC DK I+ Q
Sbjct: 123 EKKWQV----TAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVIT 178
Query: 216 V--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-I 272
+ H+ G +YI++ + D Q G AN++ ++++ + + + W
Sbjct: 179 IGKHVKG--YHYIIANLGF----TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWST 232
Query: 273 YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS- 326
EE E T+K +AL YDAV + A ++L +++ C NP+
Sbjct: 233 LEEKEYP---GAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAV 289
Query: 327 SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL 386
W G+ I +K + ++G++G I D Q G+R ++++ +E ++ + +G W+ +
Sbjct: 290 PWGQGVEIERALKQVQVEGLSGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKM 348
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIK 446
+ T E +EN+T+ VT+ V+ + M++ E E GY VDL
Sbjct: 349 VVTLT-ELPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAA 404
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA F YK + + YG + T WNG++GEL +AD+AI LTIT R +D
Sbjct: 405 EIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVID 464
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 465 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 521
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 634 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 693
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 694 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 738
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 569 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 628
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 629 TKEFFR 634
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 378 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 437
Query: 726 IGEL 729
+GEL
Sbjct: 438 VGEL 441
>gi|342187220|ref|NP_001172018.2| glutamate receptor 2 isoform 3 [Equus caballus]
gi|350587555|ref|XP_003482439.1| PREDICTED: glutamate receptor 2 isoform 4 [Sus scrofa]
gi|350587557|ref|XP_003356981.2| PREDICTED: glutamate receptor 2 isoform 1 [Sus scrofa]
gi|395843955|ref|XP_003794736.1| PREDICTED: glutamate receptor 2 isoform 3 [Otolemur garnettii]
gi|426247127|ref|XP_004017338.1| PREDICTED: glutamate receptor 2 isoform 3 [Ovis aries]
Length = 836
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 269/537 (50%), Gaps = 37/537 (6%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P + ++E +S C+ S G+ AIFG ++ N I S C HV +F
Sbjct: 11 LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFIT 66
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ PT+G H + L +S +I WD F +Y++ L LQ VL++A
Sbjct: 67 PS---FPTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAA 122
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKE 215
+ ++ ++ + + D D YR L ++++ E ++LDC DK I+ Q
Sbjct: 123 EKKWQV----TAINVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVIT 178
Query: 216 V--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-I 272
+ H+ G +YI++ + D Q G AN++ ++++ + + + W
Sbjct: 179 IGKHVKG--YHYIIANLGF----TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWST 232
Query: 273 YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS- 326
EE E T+K +AL YDAV + A ++L +++ C NP+
Sbjct: 233 LEEKEYP---GAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAV 289
Query: 327 SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL 386
W G+ I +K + ++G++G I D Q G+R ++++ +E ++ + +G W+ +
Sbjct: 290 PWGQGVEIERALKQVQVEGLSGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKM 348
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIK 446
+ T E +EN+T+ VT+ V+ + M++ E E GY VDL
Sbjct: 349 VVTLT-ELPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAA 404
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA F YK + + YG + T WNG++GEL +AD+AI LTIT R +D
Sbjct: 405 EIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVID 464
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 465 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 521
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 634 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 693
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 694 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 738
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 569 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 628
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 629 TKEFFR 634
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 378 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 437
Query: 726 IGEL 729
+GEL
Sbjct: 438 VGEL 441
>gi|511489|gb|AAA19859.1| glutamate receptor 4, partial [Carassius auratus]
gi|2570168|dbj|BAA22969.1| AMPA-type glutamate receptor [Carassius auratus]
Length = 900
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 281/580 (48%), Gaps = 55/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 24 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 83
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG + + + S C I V P+ P G + + P
Sbjct: 84 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLVT----PS---FPAEGETQFVLQLRPS-- 134
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 135 -IRGALLSLLDHYDWSRFIFLYDTDRGYAILQAIMEKAGQNGWQVS----AICVENF--N 187
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
YR LL+++ E ++D ++ IL+Q V H+ G +YI++ +
Sbjct: 188 DASYRRLLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKG--YHYIIANLGF---- 241
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ + F G AN+T ++++ + P + +M W + R + ++L
Sbjct: 242 KDISLERFMHGGANVTGFQLVDFSKPMVIKLMQRWNKLDQ---REYPGSESPPRYSSSLT 298
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRI 350
YD V A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 299 YDGVLAMAEAFRNLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRIQGLTGNI 358
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVE-QMDKEKKEKIENRTLT 409
D GRR +++++ E S+ + +G WN L+ V+ ++ IENRT+
Sbjct: 359 QFD-HYGRRVNYTMDVFELKSNGPRKIGYWND---LDKLVLVQNELSMGNDSAIENRTVI 414
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERE 463
VT+ + +G PY+M KN E E GY VDL IA + YK + +
Sbjct: 415 VTT--------IMEG-PYVMLKKNWEMYEGNDQFEGYCVDLASEIAKHIGIRYKISIVPD 465
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL RA++A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 466 GKYGARDPETKIWNGMVGELVYGRAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 525
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 526 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 565
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 679 RRSKIAVYEKMWSYMKSAEPTVFTKTTNEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 738
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 739 TMKVGGNLDSKGYGVATPKGSQLGN-AVNLAVLKLNEQGLLDKLKN 783
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F ++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +
Sbjct: 610 FTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTL 669
Query: 811 EMGSTRNFFK 820
+ GST+ FF+
Sbjct: 670 DSGSTKEFFR 679
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 422 PYVMLKKNWEMYEGNDQFEGYCVDLASEIAKHIGIRYKISIVPDGKYGARDPETKIWNGM 481
Query: 726 IGEL 729
+GEL
Sbjct: 482 VGEL 485
>gi|26335713|dbj|BAC31557.1| unnamed protein product [Mus musculus]
Length = 767
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 284/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T W G++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWKGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYGIA P L
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLG 764
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T W G+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWKGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|327276188|ref|XP_003222852.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like [Anolis
carolinensis]
Length = 959
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 270/525 (51%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++ +
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFLKLQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLERLL-------RQFLISKETL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D+ D PLLKEI++ + I++ + + IL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DSRDPTPLLKEIRDDKTATIIVHANASMSHIILNKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W+ EN ++
Sbjct: 249 EFSLQRLDSLLDD----RVNIMAFSIFNQSHAFFQEFAESLNQSWL--EN----CDHIPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVNAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ ++Y + ++ +G W+ GL V E + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQYTRNGFRQIGHWHVTKGLTMDNQV--FSSNVTESLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M EL G + VD++K +A L+F YK
Sbjct: 416 TTLIVTT---------ILENPYLMLKGNHPELEGNDRYEGFCVDMLKELAEILHFNYKIR 466
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 467 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 525 LYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLN--SNYAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L QVGGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQVGGLLDTKGYGIGMPVGSLFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M EL G + VD++K +A L+F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHPELEGNDRYEGFCVDMLKELAEILHFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|195439776|ref|XP_002067735.1| GK12585 [Drosophila willistoni]
gi|194163820|gb|EDW78721.1| GK12585 [Drosophila willistoni]
Length = 1003
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 167/620 (26%), Positives = 294/620 (47%), Gaps = 86/620 (13%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 52 AIFEQGTDDVQSAFKYAM--LNHNLNVTSRRFELQAYVDVINTADAFKLSRLICNQFSRG 109
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 110 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---Q 165
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I II W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 166 AIIDIIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 218
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 219 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IIQHVRDIKLGRRTYHYLLSGLVMDNH 277
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-----IYEENERGRSLNVRAE 287
W + V+F G NIT R+++ +R + + G +
Sbjct: 278 W-PSDVVEF-----GAINITGFRIVDTNRRAVRDFHDSRKRLEPLGSAGGGGIGGGSKMP 331
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKP-----------------------------LPT 318
+ +AALMYDAV++ A + +KP
Sbjct: 332 AISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGSGGGGGVGSSMALNESTA 391
Query: 319 PLSCENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQ 373
L C + W+ G I +++ + IDG++G I D + GRR ++SL VE V+
Sbjct: 392 LLDCNTNKGWVTPWEQGEKISRVLRKVEIDGLSGSIRFD-EDGRRINYSLHVVEMSVNST 450
Query: 374 WKVLGTWNTAFGL---NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM- 429
+ + W GL +HS + M + + + T+ +L EPY+M
Sbjct: 451 LQQVAEWRDDIGLLPLHHSSRGDYMASFSRFASSSTADYARNHTYIVTSLL--EEPYLMH 508
Query: 430 KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIG 481
K GE GY D+ +++A L Y+ L ++ YG+ N G W+G++G
Sbjct: 509 KQAAYGEQLVGNDRFEGYCKDMAELLAKRLGIKYELRLVQDGNYGSENQYAPGGWDGMVG 568
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
EL + AD+AI LTIT+ER +DFT PFM+LGISI+ RKP K+ P +FSFL PLS ++
Sbjct: 569 ELVRKEADIAIAALTITAERERVIDFTKPFMSLGISIMIRKPVKQTPGVFSFLNPLSQEI 628
Query: 542 WVYMATAYLGVSLLLFFLAR 561
W+ + +Y+GVS++L+F+ R
Sbjct: 629 WMSVTLSYVGVSIVLYFVTR 648
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM PIK+
Sbjct: 693 FWYSLAAFMQQGCDLSPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKSP 752
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA I+YG + GST +FFK
Sbjct: 753 EDLAMQSDIQYGTLLHGSTWDFFK 776
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 573 KNSNVSLYQRMHSAMES-SRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNC 630
K S + L+Q+M M + SR SV + EG+ RV KGKY ++S +Y C
Sbjct: 776 KRSQIGLHQKMWEYMNANSRLSV--HTYDEGIRRVRTSKGKYVLLVDSPKNDYVNARAPC 833
Query: 631 DLMQVGGLLDSKGYGIAMP 649
D M+VG +D+KG+G+A P
Sbjct: 834 DTMKVGRNIDTKGFGVATP 852
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 671 EPYMM-KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+M K GE GY D+ +++A L Y+ L ++ YG+ N G
Sbjct: 503 EPYLMHKQAAYGEQLVGNDRFEGYCKDMAELLAKRLGIKYELRLVQDGNYGSENQYAPGG 562
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 563 WDGMVGEL 570
>gi|221040022|dbj|BAH11774.1| unnamed protein product [Homo sapiens]
Length = 836
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 268/537 (49%), Gaps = 37/537 (6%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P + ++E +S C+ S G+ AIFG ++ N I S C HV +F
Sbjct: 11 LTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFIT 66
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ PT+G H + L +S +I WD F +Y++ L LQ VL++A
Sbjct: 67 PS---FPTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAA 122
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKE 215
+ ++ ++ + + D D YR L ++++ E ++LDC DK I+ Q
Sbjct: 123 EKKWQV----TAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVIT 178
Query: 216 V--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-I 272
+ H+ G YI++ + D Q G AN++ ++++ + + + W
Sbjct: 179 IGKHVKG--YRYIIANLGF----TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWST 232
Query: 273 YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS- 326
EE E T+K +AL YDAV + A ++L +++ C NP+
Sbjct: 233 LEEKEYP---GAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAV 289
Query: 327 SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGL 386
W G+ I +K + ++G++G I D Q G+R ++++ +E ++ + +G W+ +
Sbjct: 290 PWGQGVEIERALKQVQVEGLSGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKM 348
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIK 446
+ T E +EN+T+ VT+ V+ + M++ E E GY VDL
Sbjct: 349 VVTLT-ELPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAA 404
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA F YK + + YG + T WNG++GEL +AD+AI LTIT R +D
Sbjct: 405 EIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVID 464
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 465 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 521
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 634 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 693
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 694 TMKVGGNLDSKGYGIATPKESSLGT-PVNLAVLKLSEQGVLDKLKN 738
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 569 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 628
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 629 TKEFFR 634
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 378 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 437
Query: 726 IGEL 729
+GEL
Sbjct: 438 VGEL 441
>gi|397498512|ref|XP_003820025.1| PREDICTED: glutamate receptor, ionotropic kainate 4 [Pan paniscus]
Length = 765
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY ++NC+L Q+GGLLD+KGYGI MP
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMP 754
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|195434834|ref|XP_002065407.1| GK14683 [Drosophila willistoni]
gi|194161492|gb|EDW76393.1| GK14683 [Drosophila willistoni]
Length = 906
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 286/582 (49%), Gaps = 61/582 (10%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF +E+++ +F+ A+R IN + K + + + YDS ++ C S G
Sbjct: 32 AIFFEDEKDIELSFDEAIREIN-NLKFFELRFVSNK--RFLPTYDSFLLQQIACELISNG 88
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPT---NGVHGVNVYPESHLIS 121
+AAIFGP S +I+ + IPH+E +D + N VNV P ++S
Sbjct: 89 VAAIFGPSSKAASDIVAQIANTTGIPHIE--YDFKLEAVRQEHLNHQMSVNVAPTLSVLS 146
Query: 122 KG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLE-NAHDDDKEIRPGRPSVTIRQLPPDT 179
+ +I + +W TFT+IYET + L Q ++ A + D V +R L
Sbjct: 147 RAYFEIIKTNYEWRTFTLIYETPEGLARFQDLINIYALNSD--------YVKLRNLADYA 198
Query: 180 DDYRPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINAH 237
+D+R L KE + E HI+LDC +L+ + + +L G ++N+ L+ L ++
Sbjct: 199 EDFRVLWKEADETYHEHHIILDCEPQTLKELLQISVKFNLQGPFRNWFLTHLDTHSSGLK 258
Query: 238 TVDFQDFQPGYANITTVRM-INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ +DF+ ANIT+VR+ + NP R + R R ++ + L+
Sbjct: 259 DIYNEDFK---ANITSVRLKLTDPNPFER---------KKTRFREVDRILGNQTMLPILI 306
Query: 297 YDAVYLFA-AALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
YDAV LFA +A + +P P C + S W +G I + M++I+ D + ++
Sbjct: 307 YDAVILFANSAKNVISAMQPYHPPDRHCGSLSPWVYGPFIVHEMRTISEDDVEPHFKTEN 366
Query: 355 ----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTV---EQMDKEKKEKIENRT 407
+ GRR F+LE + ++ L W G+ + E + I+ +
Sbjct: 367 MKFDENGRRTHFNLEIYKPTVNE--PLMVWTPENGIKTRKITLETESSNTAPDFSIQRKV 424
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPE------TGELYGYSVDLIKMIANELNFTYKFVLE 461
TV V EPY M + + GY+VDLI ++ L F Y+F++
Sbjct: 425 YTV---------VTHYEEPYFMMKADHENFRGRDKYEGYAVDLISKLSELLEFDYEFMIV 475
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
N G NP+T +W+G+I +L + A + ICDLTIT RR+ VDFT+PFM LGISIL+
Sbjct: 476 NGN--GKYNPETKQWDGIIRKLIDHHAQIGICDLTITQLRRSVVDFTVPFMQLGISILHY 533
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K A + + F+FL+P + +VWVYM A L ++L L F+AR+S
Sbjct: 534 KKAPEPKNPFAFLDPFAMEVWVYMGFAQLIMTLALVFIARLS 575
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ +P+ F +NKEGV RV KEKG YAF ME+T +++ +E++C+LMQ
Sbjct: 687 SNDTDYQRAWNKMKDFKPNAFTSTNKEGVARVKKEKGGYAFLMETTSLQFNIERDCNLMQ 746
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P + + + L++ +G+ Y MKN
Sbjct: 747 IGEQIGEKHYGLAVPLGADY-RTNLSVSILQLSEKGDLYKMKN 788
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + I ++ DL + + +G + GST F
Sbjct: 624 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQNTITSLGDLIEQDEVHFGSMRGGSTSLF 683
Query: 819 F 819
F
Sbjct: 684 F 684
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 671 EPYMMKNPE------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M + + GY+VDLI ++ L F Y+F++ N G NP+T +W+G
Sbjct: 433 EPYFMMKADHENFRGRDKYEGYAVDLISKLSELLEFDYEFMIVNGN--GKYNPETKQWDG 490
Query: 725 LIGEL 729
+I +L
Sbjct: 491 IIRKL 495
>gi|348526820|ref|XP_003450917.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like
[Oreochromis niloticus]
Length = 949
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 273/520 (52%), Gaps = 46/520 (8%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHGVNVY 114
MC S+G+ A+ GP + N II ++C ++P+V+ A D K P +++
Sbjct: 65 MCQIMSKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPEDILKVHFPR--FTTLDLR 122
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P + IS ++ ++ + T +I D L+ L+Q+L ++ + ++++R
Sbjct: 123 PTNTDISLAVAGLLTFFNSTTACLICAQADCLLNLEQLL-------RQFLISKETLSVRM 175
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L D+ D PLLKEI++ + I++D + + IL++A E+ ++ Y YI + + +
Sbjct: 176 LD-DSQDPTPLLKEIRDDKTATIIVDANATMSHIILERASELGMLSVYYTYIFTSLEFSL 234
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRAETVK 290
+ D NI + N T+P + S+ W +EN +
Sbjct: 235 ----LRLDDVADQRVNIVGFSVFNKTHPFFQDFALSLNRSW--QEN----CDHAPFAGTP 284
Query: 291 IEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+ +AL++DAVY AA+Q L + + T LSC++ W+HG + N ++ + +DG+TG
Sbjct: 285 LSSALLFDAVYAVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELDGLTGH 344
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I +S+ G+R++++L ++ D + +G W++ GL+ R + ++ + + N TL
Sbjct: 345 IEFNSK-GQRSNYALRIMQNSKDGLRQIGLWHSEDGLSMERKLPSINV--TDTLFNTTLI 401
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
+T+ PY+M EL G + VD++K +A+ L F Y+ L +
Sbjct: 402 ITT---------ILENPYVMLRQNHQELEGNDRYEGFCVDMLKELADILKFKYRIRLVGD 452
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI+YR
Sbjct: 453 GVYGVPGAN-GTWTGMVGELISRKADLAVAGLTITAEREKVIDFSKPFMTLGISIMYRVH 511
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 512 LGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCILFLVARLT 551
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+NS YQRM + M+S +PSVFVKS +EG+ RV+ YA+ +EST EY ++NC+L
Sbjct: 662 QNSRYQTYQRMWNFMQSKQPSVFVKSTEEGIARVLNSN--YAYLLESTMNEYYRQRNCNL 719
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S + +F KL+
Sbjct: 720 TQIGGLLDTKGYGIGMPLGSVYRDEFDLAILKLQ 753
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 704 FVLERENTYGTLNPQ---TGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRL 760
F++ R Y NP G+ N LI Q + F + + T A+STR
Sbjct: 545 FLVARLTPYEWYNPHPCLKGRCNLLIN--QYSLGNSFWFPVGGFMQQGSTIAPRALSTRC 602
Query: 761 VAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG + GST FF+
Sbjct: 603 VSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTMHGGSTMTFFQ 662
>gi|73909236|gb|AAH28736.2| GRIA2 protein, partial [Homo sapiens]
Length = 865
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 281/570 (49%), Gaps = 43/570 (7%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F ++ +AF + + + + + L P + ++E +S C+ S G
Sbjct: 13 GLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQFSRG 66
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ AIFG ++ N I S C HV +F P+ PT+G H + L +
Sbjct: 67 VYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLKGALL 119
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--Y 182
S +I WD F +Y++ L LQ VL++A + ++ ++ + + D D Y
Sbjct: 120 S-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKKDEMY 174
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVD 240
R L ++++ E ++LDC DK I+ Q + H+ G +YI++ + D
Sbjct: 175 RSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF----TDGD 228
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAALMYDA 299
Q G AN++ ++++ + + + W EE E T+K +AL YDA
Sbjct: 229 LLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSALTYDA 285
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A ++L +++ C NP+ W G+ I +K + ++G++G I D
Sbjct: 286 VQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFD 345
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
Q G+R ++++ +E ++ + +G W+ + + T E +EN+ + VT+
Sbjct: 346 -QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKIVVVTT- 402
Query: 414 TFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
V+ + M++ E E GY VDL IA F YK + + YG + T
Sbjct: 403 ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADT 460
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 461 KIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF 520
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 521 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 550
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 663 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 722
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 723 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 767
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 598 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 657
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 658 TKEFFR 663
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 407 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 466
Query: 726 IGEL 729
+GEL
Sbjct: 467 VGEL 470
>gi|76574784|gb|ABA47260.1| KA1, partial [Macaca fascicularis]
Length = 861
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|195492331|ref|XP_002093945.1| GE21572 [Drosophila yakuba]
gi|194180046|gb|EDW93657.1| GE21572 [Drosophila yakuba]
Length = 991
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 168/620 (27%), Positives = 292/620 (47%), Gaps = 93/620 (15%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 44 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 101
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 102 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---Q 157
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 158 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 210
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 211 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNH 269
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAE---- 287
W + V+F G NIT R+++ +R + E + +S N
Sbjct: 270 W-PSDVVEF-----GAINITGFRIVDSNRRAVRDFHDSRKRLEPTGQSQSQNAGGANSLP 323
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKP--------------------------LPTPLS 321
+ +AALMYDAV++ A + +KP L
Sbjct: 324 AISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNESSALLD 383
Query: 322 CENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKV 376
C + W+ G I +++ + IDG++G I D + GRR +++L VE V+ +
Sbjct: 384 CNTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSTLQQ 442
Query: 377 LGTWNTAFGL------NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM-M 429
+ W GL N++ + M + N T VTS EPY+ +
Sbjct: 443 VAEWRDDAGLLPLHSHNYATSSRSMSASTGDYDRNHTYIVTS---------LLEEPYLSL 493
Query: 430 KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIG 481
K GE GY DL M+A +L Y+ L ++ YG N G W+G++G
Sbjct: 494 KQYTYGESLVGNDRFEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVG 553
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
EL + AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++
Sbjct: 554 ELVRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEI 613
Query: 542 WVYMATAYLGVSLLLFFLAR 561
W+ + +Y+GVS +L+F+ R
Sbjct: 614 WISVILSYVGVSFVLYFVTR 633
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 735 TFILFFIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNP 791
T + F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM
Sbjct: 679 TILNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVA 738
Query: 792 PIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
PIK EDLA + YG + GST FF+
Sbjct: 739 PIKTPEDLAMQTEVNYGTLLHGSTWEFFR 767
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+ +M M +++ V + EG+ RV + KGKYA +ES EY CD
Sbjct: 767 RRSQIGLHNKMWEYMNANQHHS-VHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCD 825
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P L K
Sbjct: 826 TMKVGRNIDTKGFGVATPIGSPLRK 850
>gi|148921519|gb|AAI46653.1| GRIK4 protein [Homo sapiens]
gi|152012469|gb|AAI50174.1| GRIK4 protein [Homo sapiens]
Length = 765
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL S + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGL--SMDSHLYASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY ++NC+L Q+GGLLD+KGYGI MP
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMP 754
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|198450670|ref|XP_001358079.2| GA16088 [Drosophila pseudoobscura pseudoobscura]
gi|198131137|gb|EAL27217.2| GA16088 [Drosophila pseudoobscura pseudoobscura]
Length = 866
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 277/568 (48%), Gaps = 55/568 (9%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N +++ F+ A+ N++ L + V D+ + +C GIA +F
Sbjct: 13 NTDQMNIVFDHAIEVANQEVGT-----TLTSLKAEVNYGDAYQSYGRLCRMMETGIAGVF 67
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ Y + G N++P ++K + +I
Sbjct: 68 GPSSRHTAVHLMSICDAMDIPHI--------YSYMSEYAEGFNLHPHPADLAKALYSLIT 119
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+ +W F +YE+ D L L ++ P VT+ + + +Y+ +L+
Sbjct: 120 EFNWTRFIFLYESADYLNILNELT-------TMFGMNGPVVTVLRYDMHLNGNYKQVLRR 172
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 173 VRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKYSE 228
Query: 249 ANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLFAA 305
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LFA
Sbjct: 229 ANITGLRLFSPEKMAVKELLMKLGYPSDQDEFRNGSC-----PITVEMALTYDAVQLFAE 283
Query: 306 ALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFS 363
L++L KP+ S S G N M+++ + +TG I + R +
Sbjct: 284 TLKNL-PFKPVSQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIFFEGNV--RKGYH 340
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFA 416
L+ +E +GTW+ R T Q D + N+T L+V +K +A
Sbjct: 341 LDVIELQPSGIVKVGTWDEQRQYRAQRLAATTAQFDN-IDNSLANKTFVVLLSVPNKPYA 399
Query: 417 KLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
+L F K E Y GY VDLIK +A++L F + FV N YG+ N + +
Sbjct: 400 QLVETF-------KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKTSNE 451
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F++
Sbjct: 452 STGMLREIMMGRADLAITDLTITSEREEAIDFTIPFMNLGIAILYLKPQKATPELFTFMD 511
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW ++ ++L V+L F L R+S
Sbjct: 512 PFSEEVWWFLGFSFLAVALSFFILGRLS 539
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA W FFTLI++SSYTANLAAFLT + I +V+DLA K G + YG
Sbjct: 583 KALSTRTVATFWLFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKR 641
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 642 TGSTRNFF 649
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M + P + N+EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 657 YKKMNKFM-TEHPEHLTEDNQEGVRRV-KTSTHYAFLMESTSIEYNTKRECNLKKIGDAL 714
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 715 DEKGYGIAM-RKNWGHRDKFNNALLELQEQGVLEKMKN 751
>gi|359319428|ref|XP_853030.3| PREDICTED: glutamate receptor, ionotropic kainate 4 [Canis lupus
familiaris]
Length = 956
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|355752721|gb|EHH56841.1| hypothetical protein EGM_06325, partial [Macaca fascicularis]
Length = 937
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|10242377|ref|NP_036704.1| glutamate receptor ionotropic, kainate 4 precursor [Rattus
norvegicus]
gi|475546|gb|AAA17830.1| glutamate receptor KA1 subunit [Rattus norvegicus]
Length = 956
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 274/525 (52%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M ++ E + Y G+ VD++K +A L F YK
Sbjct: 416 TTLVVTT---------ILENPYLMLKGNHQDMEGNDRYEGFCVDMLKELAEILRFNYKIR 466
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 467 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 525 LYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M ++ E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQDMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|24581972|ref|NP_523484.2| glutamate receptor IIA [Drosophila melanogaster]
gi|7296997|gb|AAF52268.1| glutamate receptor IIA [Drosophila melanogaster]
gi|33589416|gb|AAQ22475.1| RE27895p [Drosophila melanogaster]
Length = 907
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 292/592 (49%), Gaps = 81/592 (13%)
Query: 5 GIFGPNEEEVATAFEIAVRRINK-DFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
IF NE+E+ +F+ A R +N F L I +++ DS ++ C S
Sbjct: 36 AIFYENEKEIELSFDQAFREVNNMKFSELR----FVTIKRYMPTNDSFLLQQITCELISN 91
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI---PTNGVHGVNVYPESHLI 120
G+AAIFGP S +I+ + IPH+E +D N +NV P ++
Sbjct: 92 GVAAIFGPSSKAASDIVAQIANATGIPHIE--YDLKLEATRQEQLNHQMSINVAPSLSVL 149
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLE-NAHDDDKEIRPGRPSVTIRQLPPD 178
S+ +I ++ +W TFT+IYET + L LQ ++ A + D V +R L
Sbjct: 150 SRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSD--------YVKLRNLADY 201
Query: 179 TDDYRPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L KE + E I+LDC +LK + + L G ++N+ L+ L ++
Sbjct: 202 ADDYRILWKETDETFHEQRIILDCEPKTLKELLKVSIDFKLQGPFRNWFLTHLDTHNSGL 261
Query: 237 HTVDFQDFQPGYANITTVRM-INPTNPHIRSIMNGWIYEENERGRSLNVRAETV----KI 291
+ +DF+ ANIT+VR+ + NP ER ++ + + + +
Sbjct: 262 RDIYNEDFK---ANITSVRLKVVDANPF-------------ERKKTRLTKVDQILGNQTM 305
Query: 292 EAALMYDAVYLFAAALQS-LGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM--- 346
L+YDAV LFA++ ++ + +P P C + S W G I N MK+I+ D +
Sbjct: 306 LPILIYDAVVLFASSARNVIAAMQPFHPPNRHCGSSSPWMLGAFIVNEMKTISEDDVEPH 365
Query: 347 --TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
T + LD + G+R F+LE + +N V D K+++
Sbjct: 366 FKTENMKLD-EYGQRIHFNLEIYKPT---------------VNEPMMVWTPDNGIKKRLL 409
Query: 405 NRTLTV--TSKTFAKLRVLFQ-----GEPYMM-----KNPETGELY-GYSVDLIKMIANE 451
N L T++ F++ R ++ EPY M +N E Y GY+VDLI ++
Sbjct: 410 NLELESAGTTQDFSEQRKVYTVVTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSEL 469
Query: 452 LNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPF 511
+ F Y+F++ N G NP+T +W+G+I +L + A + +CDLTIT RR+ VDFT+PF
Sbjct: 470 MEFDYEFMIVNGN--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPF 527
Query: 512 MTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
M LGISIL+ K + + F+FLEP + +VW+YM A L ++L F+AR+S
Sbjct: 528 MQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLS 579
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV RV KEKG YAF ME+T + Y +E+NCDL Q
Sbjct: 691 SNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQ 750
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P S + S +L +GE MKN
Sbjct: 751 IGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSE--RGELQKMKN 792
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++DL + ++ +G + GST F
Sbjct: 628 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLF 687
Query: 819 F 819
F
Sbjct: 688 F 688
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 671 EPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY M +N E Y GY+VDLI ++ + F Y+F++ N G NP+T +W+G
Sbjct: 437 EPYFMMKEDHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGN--GKYNPETKQWDG 494
Query: 725 LIGEL 729
+I +L
Sbjct: 495 IIRKL 499
>gi|51085|emb|CAA40735.1| glutamate receptor 2 [Mus musculus]
gi|261278080|dbj|BAI44626.1| AMPA-selective glutamate receptor 2 flop type [Mus musculus]
gi|227247|prf||1617121B Glu receptor 2
Length = 883
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 282/573 (49%), Gaps = 41/573 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
D Q G AN++ +++ + + W E + T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVVYDDSLASKFIERWSTLEGKE--YPGAHTATIKYTSALT 300
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G I
Sbjct: 301 YDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNI 360
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+ V
Sbjct: 361 KFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVVV 418
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLN 470
T+ V+ + M++ E E GY VDL IA F YK + + YG +
Sbjct: 419 TT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARD 475
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P +
Sbjct: 476 ADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 535
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 536 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|194212786|ref|XP_001503336.2| PREDICTED: glutamate receptor, ionotropic kainate 4-like isoform 1
[Equus caballus]
Length = 956
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|204386|gb|AAA41242.1| glutamate receptor subunit 4 [Rattus norvegicus]
Length = 902
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 166/582 (28%), Positives = 281/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C+ I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCRRLHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + IENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AIENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL A + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASESAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL A + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASESAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|195166248|ref|XP_002023947.1| GL27141 [Drosophila persimilis]
gi|194106107|gb|EDW28150.1| GL27141 [Drosophila persimilis]
Length = 902
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 278/568 (48%), Gaps = 55/568 (9%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N +++ F+ A+ N++ L + V D+ + +C GIA +F
Sbjct: 49 NTDQMNIVFDHAIEVANQEVGT-----TLTSLKAEVNYGDAYQSYGRLCRMMETGIAGVF 103
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ ++ + G N++P ++K + +I
Sbjct: 104 GPSSRHTAVHLMSICDAMDIPHIYSYM--------SEYAEGFNLHPHPADLAKALYSLIT 155
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+ +W F +YE+ D L L ++ P VT+ + + +Y+ +L+
Sbjct: 156 EFNWTRFIFLYESADYLNILNELT-------TMFGMNGPVVTVLRYDMHLNGNYKQVLRR 208
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ S ++ I++ S + L QA++V ++ + YI+ + H+ D ++++
Sbjct: 209 VRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDF----HSFDLEEYKYSE 264
Query: 249 ANITTVRMINPTNPHIRSIMN--GWIYEENE-RGRSLNVRAETVKIEAALMYDAVYLFAA 305
ANIT +R+ +P ++ ++ G+ +++E R S + +E AL YDAV LFA
Sbjct: 265 ANITGLRLFSPEKMAVKELLMKLGYPSDQDEFRNGSC-----PITVEMALTYDAVQLFAE 319
Query: 306 ALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDG--MTGRINLDSQTGRRNSFS 363
L++L KP+ S S G N M+++ + +TG I + R +
Sbjct: 320 TLKNL-PFKPVSQNCSQRTESVRDDGSSFKNYMRTLRLTDRLLTGPIFFEGNV--RKGYH 376
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFA 416
L+ +E +GTW+ R T Q D + N+T L+V +K +A
Sbjct: 377 LDVIELQPSGIVKVGTWDEQRQYRAQRLAATTAQFDN-IDNSLANKTFVVLLSVPNKPYA 435
Query: 417 KLRVLFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 475
+L F K E Y GY VDLIK +A++L F + FV N YG+ N + +
Sbjct: 436 QLVETF-------KQLEGNSQYEGYGVDLIKELADKLGFNFTFV-NGGNDYGSYNKTSNE 487
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
G++ E+ RADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F++
Sbjct: 488 STGMLREIMMGRADLAITDLTITSEREEAIDFTIPFMNLGIAILYLKPQKATPELFTFMD 547
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLARIS 563
P S +VW ++ ++L V+L F L R+S
Sbjct: 548 PFSEEVWWFLGFSFLAVALSFFILGRLS 575
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA--KAGRIKYGCVE 811
+A+STR VA W FFTLI++SSYTANLAAFLT + I +V+DLA K G + YG
Sbjct: 619 KALSTRTVATFWLFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLADNKDG-VVYGAKR 677
Query: 812 MGSTRNFF 819
GSTRNFF
Sbjct: 678 TGSTRNFF 685
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y++M+ M + P + N+EGV RV K YAF MEST IEY ++ C+L ++G L
Sbjct: 693 YKKMNKFM-TEHPEHLTEDNQEGVRRV-KTSTHYAFLMESTSIEYNTKRECNLKKIGDAL 750
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 751 DEKGYGIAM-RKNWGHRDKFNNALLELQEQGVLEKMKN 787
>gi|426370793|ref|XP_004052344.1| PREDICTED: glutamate receptor, ionotropic kainate 4 [Gorilla
gorilla gorilla]
Length = 981
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|410910066|ref|XP_003968511.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 4-like [Takifugu rubripes]
Length = 967
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 270/520 (51%), Gaps = 46/520 (8%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHGVNVY 114
MC S+G+ A+ GP + N II ++C ++P+V+ A D K P +++
Sbjct: 83 MCQIMSKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPEDILKVHYPR--FTTLDLR 140
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P + IS ++ ++ + T +I D L+ L+Q+L + + ++++R
Sbjct: 141 PTNTDISLAVAGLLTFFNSTTTCLICAQADCLLNLEQLL-------RRFLISKETLSVRV 193
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L D+ D P+LKEI++ + I++D + + IL++A E+ ++ Y YI + + +
Sbjct: 194 LD-DSQDPTPVLKEIRDDKTATIVVDANTTMSHIILERASELGMLSVYYTYIFTSLEFSL 252
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRAETVK 290
+ D NI + N T+P + S+ W +EN + +
Sbjct: 253 ----LQLDDVADQRVNIIGFSVFNKTHPFFQDFVISLNRSW--QEN----CDHAPFAGIP 302
Query: 291 IEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+ +AL +DAVY AA+Q L + + T LSC++ W+HG + N ++ + ++G+TG
Sbjct: 303 LSSALFFDAVYTVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGH 362
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I +S+ G+R++++L ++ D + +G W++ GL+ RT+ ++ +T
Sbjct: 363 IEFNSK-GQRSNYALRIMQNSQDGLRQIGLWHSEDGLSMERTLPSIN-----------VT 410
Query: 410 VTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERE 463
T PY+M ++ E + Y G+ VD++K +A+ L F Y+ L +
Sbjct: 411 DTLFNTTLTITTILENPYVMLRQNHQDLEGNDRYEGFCVDMLKELADILKFKYRIRLVGD 470
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG G W G++GEL ++ADLA+ LTIT+ER +DF+ P+MT GISI+YR
Sbjct: 471 GHYGVPGAN-GTWTGMVGELISRKADLAVAGLTITAEREKVIDFSKPYMTXGISIMYRVH 529
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 530 LGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+NS YQRM + M S +PSVFVKS +EG+ RV+K YAF +EST EY ++NC+L
Sbjct: 680 QNSRYQTYQRMWNFMHSKQPSVFVKSTEEGIARVLKSN--YAFLLESTMNEYYRQRNCNL 737
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYGI MP S + +F K++
Sbjct: 738 TQIGGLLDTKGYGIGMPLGSVYRDEFDLAILKMQ 771
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Query: 704 FVLERENTYGTLNPQ---TGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRL 760
F++ R Y NP G+ N LI Q + F + + A+STR
Sbjct: 563 FLVARLTPYEWYNPHPCIKGRCNLLIN--QYSLGNSFWFPVGGFMQQGSAIAPRALSTRC 620
Query: 761 VAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG + GST FF+
Sbjct: 621 VSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTMHGGSTMTFFQ 680
>gi|119587915|gb|EAW67511.1| glutamate receptor, ionotropic, kainate 4, isoform CRA_a [Homo
sapiens]
Length = 933
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 56 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 113
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 114 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 166
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 167 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 225
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 226 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 275
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 276 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 335
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 336 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHL--YASNISDTLFN 392
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 393 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 449
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 450 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 507
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 508 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 546
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 647 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 703
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 704 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 748
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 587 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 646
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 647 IHGGSSMTFFQ 657
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 404 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 461
Query: 725 LIGEL 729
++GEL
Sbjct: 462 MVGEL 466
>gi|332208492|ref|XP_003253339.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 4 [Nomascus leucogenys]
Length = 956
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|334329822|ref|XP_003341273.1| PREDICTED: glutamate receptor 4 [Monodelphis domestica]
Length = 902
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M W + L+ R +ET K +
Sbjct: 247 ISLERFMHGGANVTGFQLVDFNTPMVTKLMQRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + +ENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AVENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 786
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|77683191|ref|NP_001029331.1| glutamate receptor ionotropic, kainate 4 precursor [Pan
troglodytes]
gi|61213662|sp|Q5IS46.1|GRIK4_PANTR RecName: Full=Glutamate receptor ionotropic, kainate 4;
Short=GluK4; Flags: Precursor
gi|56122338|gb|AAV74320.1| glutamate receptor ionotropic kainate 4 [Pan troglodytes]
gi|256997166|dbj|BAI22776.1| glutamate receptor, ionotropic, kainate 4 [Pan troglodytes]
Length = 956
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|109730793|gb|AAI18011.1| Glutamate receptor, ionotropic, kainate 4 [Mus musculus]
Length = 956
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDSTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFQQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|195055109|ref|XP_001994463.1| GH16113 [Drosophila grimshawi]
gi|193892226|gb|EDV91092.1| GH16113 [Drosophila grimshawi]
Length = 884
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 164/563 (29%), Positives = 271/563 (48%), Gaps = 45/563 (7%)
Query: 10 NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIF 69
N E++ F+ A+ N + + + + V D+ H+ +C GIA +F
Sbjct: 30 NTEQMNIVFDHAIEVANVEL-----GLAMSSLKADVNYGDAYHSYGQLCRMLETGIAGVF 84
Query: 70 GPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIIN 129
GP S + S+C DIPH+ Y + G N++P +SK + +I
Sbjct: 85 GPSSRHTAVHLMSICDAMDIPHI--------YSYMSEYAEGFNLHPHPADLSKALYSLIT 136
Query: 130 DMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-DYRPLLKE 188
+W F +YE+ + L L ++ + P VT+ + + +Y+P+L+
Sbjct: 137 AFEWSRFIFLYESAEYLSILNEL-------NTLFGTNGPIVTVLRYDMQLNGNYKPILRR 189
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
++ S ++ IL+ S + L QA++V ++ + +YI+ + H+ D ++++
Sbjct: 190 VRKSMDNRILVVGSTETVPEFLNQAQQVGIINEDYSYIIGNLDF----HSFDLEEYKYSE 245
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
ANIT++R+ +P ++ +M Y N + V +E AL YDAV LFA L+
Sbjct: 246 ANITSLRLFSPEKMAVKELMQKMGY--NNDQDDFRNGSCPVTVEMALTYDAVQLFAETLR 303
Query: 309 SLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
+L KP+ S + G N M+++ + + + R + L+ +E
Sbjct: 304 NL-PFKPVSQNCSQRTENVRDDGSSFKNYMRTLRLRERLLTGPIYFEGNVRKGYHLDVIE 362
Query: 369 YVSDQWKVLGTWNTAFGLNHSR---TVEQMDKEKKEKIENRT----LTVTSKTFAKLRVL 421
+GTW+ R T Q D + N+T L+V +K +A L
Sbjct: 363 LQPSGIVKVGTWDEQRDYRPERLAPTNSQFDN-IDNSLANKTFIVLLSVPNKPYASLV-- 419
Query: 422 FQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
E Y K E Y GY V+LIK +A++L F + F N YG+ N T + G++
Sbjct: 420 ---ESY--KQLEGNSQYEGYGVELIKELADKLGFNFTFQ-NGGNDYGSYNKSTNESTGML 473
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
++ ADLAI DLTITSER A+DFT+PFM LGI+ILY KP K P+LF+F++P S +
Sbjct: 474 RQITHGYADLAITDLTITSEREEAMDFTIPFMNLGIAILYLKPQKATPELFTFMDPFSEE 533
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
VW ++ ++ GVSL F L R+S
Sbjct: 534 VWWFLGLSFFGVSLSFFILGRLS 556
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+A+STR VAG WWFFTLI++SSYTANLAAFLT + I +V+DLA+ + YG
Sbjct: 600 KALSTRTVAGFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSVDDLAENKDGVVYGAKRT 659
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 660 GSTRNFF 666
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y +M+ M + P ++N+EGVERV K YAF MEST IE+ ++ C+L ++G L
Sbjct: 674 YVKMNKFM-TEHPEYLTETNEEGVERV-KISTHYAFLMESTSIEFNTKRECNLKKIGDAL 731
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
D KGYGIAM + + F A L + QG MKN
Sbjct: 732 DEKGYGIAM-RKNWPHRDKFNNALLELQEQGVLEKMKN 768
>gi|29029595|ref|NP_055434.2| glutamate receptor ionotropic, kainate 4 precursor [Homo sapiens]
gi|209572625|sp|Q16099.2|GRIK4_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 4;
Short=GluK4; AltName: Full=Excitatory amino acid
receptor 1; Short=EAA1; AltName: Full=Glutamate receptor
KA-1; Short=KA1; Flags: Precursor
gi|119587916|gb|EAW67512.1| glutamate receptor, ionotropic, kainate 4, isoform CRA_b [Homo
sapiens]
gi|158258889|dbj|BAF85415.1| unnamed protein product [Homo sapiens]
gi|168275824|dbj|BAG10632.1| glutamate receptor, ionotropic kainate 4 precursor [synthetic
construct]
Length = 956
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|449281659|gb|EMC88695.1| Glutamate receptor 3, partial [Columba livia]
Length = 804
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 264/527 (50%), Gaps = 61/527 (11%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYP 115
C+ S G+ AIFG + N + S C V + D + F+ + + P
Sbjct: 1 CSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV-------IQMRP 53
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
+ I ++ W+ F +Y+T LQ ++E A ++ ++ R +I+
Sbjct: 54 A---LKGAILSLLAHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSVGSIK-- 107
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSY 232
D ++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 108 --DVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF 162
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKI 291
+ + G ANIT +++N NP ++ + W+ +E E + N +K
Sbjct: 163 ----TDIVLERVMHGGANITGFQIVNNENPMVQQFLQRWVRLDEREFPEAKN---SPLKY 215
Query: 292 EAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDG 345
+AL +DAV + A A + L ++ + C NP+ W G+ I +K + + G
Sbjct: 216 TSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQG 275
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDK---EKKEK 402
MTG I D+ GRR +++++ E + + G WN + R V +D+
Sbjct: 276 MTGNIQFDTY-GRRTNYTIDVYEMKAAGSRKAGYWN-----EYERFVPALDQLPSNDTSS 329
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTY 456
+ENRT+ VT+ PY+M KN E E Y GY VDL IA + Y
Sbjct: 330 VENRTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKY 380
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGI 516
K + + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGI
Sbjct: 381 KLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGI 440
Query: 517 SILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 441 SIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 487
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 602 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 661
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 662 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 706
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 537 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 596
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 597 TKEFFR 602
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 344 PYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGM 403
Query: 726 IGEL 729
+GEL
Sbjct: 404 VGEL 407
>gi|118101923|ref|XP_417889.2| PREDICTED: glutamate receptor, ionotropic kainate 4 [Gallus gallus]
Length = 959
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 270/525 (51%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ + GP S + I ++C ++PH P ++ +
Sbjct: 79 TAETMCQILPKGVVGVLGPSSSPASSSIISNICGEKEVPHFRV--APEEFLKLQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D+ D PLLKEI++ + I++ + + TIL++A E+ + Y YI +
Sbjct: 190 SVRMLD-DSRDPTPLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ ++S+ W +EN A
Sbjct: 249 EFSLQRLDSQLDD----RVNILGFSIFNQSHAFFQEFVQSLNQSW--QENCDHAPFTGPA 302
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY +A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 303 ----LSSALLFDAVYAVVSAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ ++ +G W+ + GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQHTHSGFRQIGHWHVSEGLSMDNRI--FSSNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M EL G + VD++K +A L F YK
Sbjct: 416 TTLIVTT---------ILENPYLMLKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIH 466
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 467 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 525 LYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L QVGGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQVGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T +A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPQALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTTIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M EL G + VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIHLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|126326693|ref|XP_001371507.1| PREDICTED: glutamate receptor 4 isoform 1 [Monodelphis domestica]
Length = 902
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 280/582 (48%), Gaps = 58/582 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M W + L+ R +ET K +
Sbjct: 247 ISLERFMHGGANVTGFQLVDFNTPMVTKLMQRW--------KKLDQREYPGSETPPKYTS 298
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A ++L +K C NP++ W G+ + +K + I G+T
Sbjct: 299 ALTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 358
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + + + + +ENRT
Sbjct: 359 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMPTLGNDTA-AVENRT 416
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 417 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 467
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 468 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 527
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 528 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 676 STKEFFR 682
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 742 TMKVGGNLDSKGYGVATPKGSSL 764
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 426 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|326933273|ref|XP_003212731.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 4-like [Meleagris gallopavo]
Length = 967
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 270/525 (51%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ + GP S + I ++C ++PH P ++ +
Sbjct: 87 TAETMCQILPKGVVGVLGPSSSPASSSIISNICGEKEVPHFRV--APEEFLKLQLQRFTT 144
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 145 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 197
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D+ D PLLKEI++ + I++ + + TIL++A E+ + Y YI +
Sbjct: 198 SVRMLD-DSRDPTPLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYIFTNL 256
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ ++S+ W +EN A
Sbjct: 257 XFSLQRLDSQLDD----RVNILGFSIFNQSHAFFQEFVQSLNQSW--QENCDHAPFTGPA 310
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY +A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 311 ----LSSALLFDAVYAVVSAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 366
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ ++ +G W+ + GL+ + + + N
Sbjct: 367 LTGHIEFNSK-GQRSNYALKILQHTHSGFRQIGHWHVSEGLSMDNRI--FSSNISDSLFN 423
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M EL G + VD++K +A L F YK
Sbjct: 424 TTLIVTT---------ILENPYLMLKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIH 474
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 475 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 532
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 533 LYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 577
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 678 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 734
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L QVGGLLD+KGYGI MP S F +F +L+
Sbjct: 735 NEYYRQRNCNLTQVGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 779
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T +A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 618 TIAPQALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTTIEYGT 677
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 678 IHGGSSMTFFQ 688
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M EL G + VD++K +A L F YK L + YG P+ G W G
Sbjct: 435 PYLMLKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIHLVGDGVYGV--PEANGTWTG 492
Query: 725 LIGEL 729
++GEL
Sbjct: 493 MVGEL 497
>gi|109109025|ref|XP_001106948.1| PREDICTED: glutamate receptor, ionotropic kainate 4 isoform 1
[Macaca mulatta]
gi|297269413|ref|XP_002799927.1| PREDICTED: glutamate receptor, ionotropic kainate 4 isoform 2
[Macaca mulatta]
Length = 956
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|291383793|ref|XP_002708408.1| PREDICTED: glutamate receptor, ionotropic, kainate 4-like
[Oryctolagus cuniculus]
Length = 956
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|403262543|ref|XP_003923638.1| PREDICTED: glutamate receptor, ionotropic kainate 4 [Saimiri
boliviensis boliviensis]
Length = 956
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|195055111|ref|XP_001994464.1| GH16102 [Drosophila grimshawi]
gi|193892227|gb|EDV91093.1| GH16102 [Drosophila grimshawi]
Length = 902
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 160/562 (28%), Positives = 267/562 (47%), Gaps = 48/562 (8%)
Query: 14 VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQS 73
+ FE A+ +N D + L + V DS+ +C G+ A+FGP +
Sbjct: 45 IRQTFEHAISVVNSDLS-----VPLAGETEQVAFGDSMQAFSQLCRLMQNGVGAVFGPAA 99
Query: 74 IENRNIIESMCQMFDIPHV--EAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDM 131
+ + C DIP + W P G N++P I+ + II
Sbjct: 100 KHTAAHLLNACDAKDIPFIYPHLSWSPQS--------DGFNLHPHPEDIAHALYDIITQF 151
Query: 132 DWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKN 191
+W F YE+ + L L ++ I+ R + + +Y+ +L+ ++
Sbjct: 152 EWSRFIFCYESAEYLTILDHLMTLYGIKGPVIKVMRYDLNL------NGNYKSVLRRVRK 205
Query: 192 SSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANI 251
S ++ I++ S + L+QA++V +M + Y++ ++ HT + ++++ ANI
Sbjct: 206 SEDNRIVVVGSTEGVAEFLRQAQQVGIMNEDYTYLVGN----LDLHTYELEEYKYSEANI 261
Query: 252 TTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG 311
T +RM +P +R ++ + + N + + + AL YDAV + A L
Sbjct: 262 TGLRMFDPDKKEVRQLIET-LQQALGESEPTNNGSSPITLAMALTYDAVRVIAETTNFLP 320
Query: 312 ERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITI--DGMTGRINLDSQTGRRNSFSLEFV 367
+ P L+C E + Q G N M+S+ I +TGRI R FS + +
Sbjct: 321 YQ---PQQLNCSERHDNVQPDGSTFRNYMRSLEILEKTITGRIFFRGNI--RKGFSFDVI 375
Query: 368 EYVSDQWKVLGTWNTA--FGLNHSRTVEQMDKEKKEKIENRT----LTVTSKTFAKLRVL 421
E + +GTW F N + + ++ + N+T ++V +K +A L
Sbjct: 376 ELQTVGLVKVGTWEEGKEFQFNRPPQITNFNDNEENSLVNKTFKVLISVPNKPYASL--- 432
Query: 422 FQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIG 481
+ ++ N + GY +DLIK +A +L F + F N YG+ N T G++
Sbjct: 433 VESINTLIGN---SQYEGYGIDLIKELAEKLGFNFTF-HNGGNDYGSFNKTTNMTTGMLK 488
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
E+ E A+LAI D+TITSER A+DF++PFM LGI+ILY KP K +P LFSF++P S +V
Sbjct: 489 EIVEGHAELAITDITITSEREEAIDFSIPFMNLGIAILYLKPQKAEPALFSFMDPFSKEV 548
Query: 542 WVYMATAYLGVSLLLFFLARIS 563
W+Y+ AYLGVSL LF + R+S
Sbjct: 549 WLYLGIAYLGVSLCLFVIGRLS 570
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAK-AGRIKYGCVEM 812
+++STR ++ +WWFFTLIM+SSYTANLAAFLT + I +VEDLA+ ++YG
Sbjct: 614 KSLSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPSSSIDSVEDLAENKDDVQYGAKRT 673
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 674 GSTRNFF 680
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M++ + S+ P+ ++N++GV+ +VK K+AF M
Sbjct: 666 VQYGAKRTGSTRNFFLTSEEEIYMKMNAYL-SNNPAFLTETNQDGVD-MVKAGTKFAFLM 723
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IEY + C+L ++G LD KGYGIAMP + + + F A L + QG +KN
Sbjct: 724 ESTSIEYNTVRECNLKKIGEALDEKGYGIAMPKN-WPYRDKFNNALLELQEQGVLARLKN 782
>gi|125984636|ref|XP_001356082.1| GA20012 [Drosophila pseudoobscura pseudoobscura]
gi|195161690|ref|XP_002021695.1| GL26368 [Drosophila persimilis]
gi|54644400|gb|EAL33141.1| GA20012 [Drosophila pseudoobscura pseudoobscura]
gi|194103495|gb|EDW25538.1| GL26368 [Drosophila persimilis]
Length = 898
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 289/591 (48%), Gaps = 71/591 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ + IF NE+E+ +F+ A R +N A ++ I +++ + DS ++ C
Sbjct: 28 ITVGAIFYENEKEIELSFDQAFREVNNLKFA---ELRFVTIKRYMPSNDSFLLQQITCEL 84
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH-----GVNVYP 115
S G+AAIFGP S +I+ + IPH+E + T H VNV P
Sbjct: 85 ISNGVAAIFGPSSKAASDIVAQIANTTGIPHIEY----DLKLEATRQEHLNHQMSVNVAP 140
Query: 116 ESHLISKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
++S+ +I + +W TFT+IYET + L LQ ++ N H + + V +R
Sbjct: 141 TLSVLSRAYFEIIKTNYEWRTFTLIYETPEGLARLQDLM-NIHALNSDY------VKLRN 193
Query: 175 LPPDTDDYRPLLKEIKNSSESH-ILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
L DYR L KE + H I+LDC +LK + + L G ++N+ L+
Sbjct: 194 LADYAGDYRVLWKEADETFHEHRIILDCEPGTLKELLKISVDFKLQGPFRNWFLTH---- 249
Query: 234 INAHTVDFQDF--QPGYANITTVRM--INPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
+N H+ +D + ANIT+VR+ ++P NP ER ++ R + +
Sbjct: 250 LNTHSSGLKDIYNEDFKANITSVRLKIVDP-NPF-------------ERKKTRISRVDQI 295
Query: 290 ----KIEAALMYDAVYLFA-AALQSLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITI 343
+ L+YDAV LFA +A + +P P C +P+ W G I N MK+I+
Sbjct: 296 LGNQTMLPILIYDAVVLFANSARNIIAAMQPYHPPNRHCGSPNPWMLGPFIVNEMKTISE 355
Query: 344 DGM-----TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE 398
D + T + LD + G+R F+LE + ++ L W G+ + +
Sbjct: 356 DDVEPHFKTENMKLD-ENGQRTQFNLEIYKPTVNE--PLMVWTPDNGIKR----RHISLD 408
Query: 399 KKEKIENRTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANEL 452
+ + +V K + V EPY M +N E Y GY+VDLI ++ L
Sbjct: 409 LGDSGSTQDFSVQRKVYTV--VTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELL 466
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
F Y+F++ N G N +T +W+G+I +L + A + +CDLTIT RR+ VDFT+PFM
Sbjct: 467 EFDYEFMIVNGN--GKYNSETKQWDGIIRKLIDHHAQIGVCDLTITQLRRSVVDFTVPFM 524
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LGISIL+ K + + F+FLEP + +VW+YM A L ++L +AR+S
Sbjct: 525 QLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLVMTLAFVLIARLS 575
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV RV KEKG YAF ME+T + Y +E+NCDL Q
Sbjct: 687 SNETDYQRAWNQMKDFNPSAFTTTNKEGVARVRKEKGSYAFLMETTSLTYNIERNCDLTQ 746
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P + + + L++ +GE Y MKN
Sbjct: 747 IGEQIGEKHYGLAVPLGADY-RTNLSVSILQLSEKGELYKMKN 788
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ GMWWFF L+M+S+YTANLAAFLT+ + IK+++ L + +KYG + GST F
Sbjct: 624 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSTIKDLQGLIEQDEVKYGSMRGGSTSLF 683
Query: 819 F 819
F
Sbjct: 684 F 684
>gi|189067233|dbj|BAG36943.1| unnamed protein product [Homo sapiens]
Length = 956
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNP 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|348574059|ref|XP_003472808.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like [Cavia
porcellus]
Length = 956
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|26327839|dbj|BAC27660.1| unnamed protein product [Mus musculus]
Length = 956
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFQQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|241131373|ref|XP_002404506.1| glutamate receptor, putative [Ixodes scapularis]
gi|215493616|gb|EEC03257.1| glutamate receptor, putative [Ixodes scapularis]
Length = 760
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 266/555 (47%), Gaps = 84/555 (15%)
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ +G+ A+ GP + C +PHV + + P +G + P
Sbjct: 1 VCSLLQQGVIAVMGPPDPTTALLARKACAAHRVPHVYMHREQHGPGPPLDGA-SFTLTPS 59
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGR-PSVTI--R 173
I I ++ W+ FTI+Y+ D L+ L+ + + P P+VT+ R
Sbjct: 60 PEEIGVAIRDLVTAQRWNHFTIVYDKPDALIRLRATV-------ALLAPASGPAVTVSLR 112
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
+ D D P+L++I S ES+I+LD + +L+QA+++ ++ +Y NYI++
Sbjct: 113 TIFRDQDPA-PVLRDITKSGESNIILDIDATRLGDVLRQAQKIGMLTEYHNYIVTT---- 167
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ HTVD +F+ N++ +++ R L + + EA
Sbjct: 168 LDLHTVDLSEFRYSRTNLSGFELLD---------------------RDLWQQDLGLTKEA 206
Query: 294 ALMYDAVYLFAAALQSLGERKPLPTPLSCE--------------NPSSWQHGL-GIGNLM 338
Y ++ ++S R+PL +SC NP S + L +G
Sbjct: 207 ---YAKTGIYPLFIRSRPTRRPLS--VSCRHIDCSTNVERLVALNPFSAETVLYALGGHS 261
Query: 339 KSITID------GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTV 392
K + + G+TG ++LD + GRR + +L V+ +GTW+ GL +RT
Sbjct: 262 KYVCLSMQIHFFGLTGPVHLD-RFGRRENITLHVVQLKKAGLASIGTWSLKAGLKITRTT 320
Query: 393 EQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIK 446
+ +E + ++ +T +T+ PY+M +L G + VDL++
Sbjct: 321 SMVQEEILDTLKRKTFQITT---------LINSPYVMLKKSASQLSGNDRFEGFCVDLVR 371
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
++ L F Y+ L R+ YGT + TG+WNG++ EL ++ ADLA+ DLTIT R AVD
Sbjct: 372 ELSLLLGFRYQLRLVRDGAYGTKD-STGRWNGMVRELVDREADLALGDLTITYVREEAVD 430
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS--- 563
FTMPFMTLGI IL+RKP + LF FL PLS DVW+ +A +YLGVS LL LAR S
Sbjct: 431 FTMPFMTLGIGILFRKPQGDR-TLFFFLSPLSSDVWLCVAVSYLGVSFLLCLLARFSPAE 489
Query: 564 SGSRLRYSAKNSNVS 578
SG + R +S
Sbjct: 490 SGLKRRSCCCEGTLS 504
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+ S RL+A WWFF+ + IS+YTANLA+FLT R+ PI++ EDL K ++YGCV G
Sbjct: 541 RSASGRLLAASWWFFSFVAISTYTANLASFLTRERLRSPIQSAEDLVKQSDVRYGCVRSG 600
Query: 814 STRNFFKV 821
ST FFK
Sbjct: 601 STEAFFKA 608
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K N + Y+RM AM+ S V+SN EGV RV+ E YAF MEST IEY +++C L
Sbjct: 607 KAINYTTYERMWQAMKHS----MVESNSEGVSRVLSEA--YAFLMESTSIEYVAQRHCQL 660
Query: 633 MQVGGLLDSKGYGIAMPT 650
QVGGLLDSKGYGIA PT
Sbjct: 661 NQVGGLLDSKGYGIATPT 678
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M +L G + VDL++ ++ L F Y+ L R+ YGT + TG+WNG+
Sbjct: 345 PYVMLKKSASQLSGNDRFEGFCVDLVRELSLLLGFRYQLRLVRDGAYGTKD-STGRWNGM 403
Query: 726 IGELQEQ 732
+ EL ++
Sbjct: 404 VRELVDR 410
>gi|68052303|sp|Q5R4M0.1|GRIA2_PONAB RecName: Full=Glutamate receptor 2; Short=GluR-2; AltName:
Full=AMPA-selective glutamate receptor 2; AltName:
Full=GluR-B; AltName: Full=GluR-K2; AltName:
Full=Glutamate receptor ionotropic, AMPA 2; Short=GluA2;
Flags: Precursor
gi|55733226|emb|CAH93296.1| hypothetical protein [Pongo abelii]
Length = 883
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/574 (27%), Positives = 282/574 (49%), Gaps = 43/574 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 27 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 81 FSRGVYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 133
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 134 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 188
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 189 DEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 242
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G AN++ ++++ + + + W EE E T+K +AL
Sbjct: 243 TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYTSAL 299
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
Y AV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 300 TYYAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 359
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+
Sbjct: 360 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVV 417
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ V+ + M++ E E GY VDL IA F YK + + YG
Sbjct: 418 VTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIAGDGKYGAR 474
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
+ T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 475 DADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG 534
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 VFSFLYPLAYEIWMCIVFAYIGVSVVLFLVSRFS 568
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 681 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 740
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 741 TMKVGGNLDSKGYGIATPKGSSLGT-PVNLAVLKLSEQGVLDKLKN 785
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 616 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 675
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 676 TKEFFR 681
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 425 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIAGDGKYGARDADTKIWNGM 484
Query: 726 IGEL 729
+GEL
Sbjct: 485 VGEL 488
>gi|544590|gb|AAB29311.1| excitatory amino acid receptor 1 [Homo sapiens]
Length = 956
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRTDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRIHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|76574786|gb|ABA47261.1| KA2 [Macaca fascicularis]
Length = 891
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|304766513|ref|NP_780690.2| glutamate receptor ionotropic, kainate 4 precursor [Mus musculus]
gi|341940775|sp|Q8BMF5.2|GRIK4_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 4;
Short=GluK4; Flags: Precursor
Length = 956
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFQQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|194752151|ref|XP_001958386.1| GF23545 [Drosophila ananassae]
gi|190625668|gb|EDV41192.1| GF23545 [Drosophila ananassae]
Length = 988
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 170/618 (27%), Positives = 294/618 (47%), Gaps = 92/618 (14%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 42 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 99
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 100 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---Q 155
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 156 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 208
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 209 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IIQHVRDIKLGRRTYHYLLSGLVMDNH 267
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAE----T 288
W D +F G NIT R+++ + +R + E G+S N
Sbjct: 268 W----PTDVVEF--GAINITGFRIVDSSRRAVRDFHDSRKRLE-PNGQSQNSVGANGLPA 320
Query: 289 VKIEAALMYDAVYLFAAALQSLGERKP--------------------------LPTPLSC 322
+ +AALMYDAV++ A + +KP L C
Sbjct: 321 ISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGGSSSSATGTNESSALLDC 380
Query: 323 ENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVL 377
+ W+ G I +++ + IDG++G I D + GRR +++L VE V+ + +
Sbjct: 381 NTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSTLQQV 439
Query: 378 GTWNTAFGL------NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN 431
W GL +++ + + + N T V+S VL EPY+M
Sbjct: 440 AEWRDDVGLLPLNSRSYAASSRSVSASTGDYARNHTYIVSS-------VL--EEPYLMHR 490
Query: 432 PETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGEL 483
GE GY DL M+A +L Y+ L ++ YG N G W+G++GEL
Sbjct: 491 QSFGEQLVGNERFEGYCKDLADMLAAQLGIKYELRLVQDGNYGAENQYAPGGWDGMVGEL 550
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
+ ADLAI LTIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++W+
Sbjct: 551 VRKEADLAIGPLTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEIWM 610
Query: 544 YMATAYLGVSLLLFFLAR 561
+ +Y+GVS++L+F+ R
Sbjct: 611 SVILSYVGVSIVLYFVTR 628
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM PIK+
Sbjct: 679 FWYSLAAFMQQGCDLTPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKSP 738
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA ++YG + GST +FF+
Sbjct: 739 EDLAMQTDVQYGTLLHGSTWDFFR 762
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+ +M M ++ P + V + EG+ RV KGKYA +ES EY CD
Sbjct: 762 RRSQIGLHNKMWEYMNAN-PHLSVHTYDEGIRRVRTSKGKYALLLESPKNEYVNARTPCD 820
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P L K
Sbjct: 821 TMKVGRNIDTKGFGVATPIGSPLRK 845
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKW 722
EPY+M GE GY DL M+A +L Y+ L ++ YG N G W
Sbjct: 484 EPYLMHRQSFGEQLVGNERFEGYCKDLADMLAAQLGIKYELRLVQDGNYGAENQYAPGGW 543
Query: 723 NGLIGEL 729
+G++GEL
Sbjct: 544 DGMVGEL 550
>gi|256997168|dbj|BAI22777.1| glutamate receptor, ionotropic, kainate 5 [Pan troglodytes]
Length = 980
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQXLPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|190336803|gb|AAI62576.1| Glutamate receptor, ionotropic, AMPA 4a [Danio rerio]
Length = 898
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/580 (28%), Positives = 282/580 (48%), Gaps = 55/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 22 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG + + + S C I V P+ P G + + P
Sbjct: 82 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLVT----PS---FPAEGETQFVLQLRPS-- 132
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 133 -IRGALLSLLDHYDWSRFVFLYDTDRGYAVLQAIMEKAGQNGWQVS----AICVENF--N 185
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
YR LL+++ E ++D ++ IL+Q V H+ G +YI++ +
Sbjct: 186 DASYRRLLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKG--YHYIVANLGF---- 239
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ + F G AN+T ++++ + P + +M W + R + ++L
Sbjct: 240 KDISLERFMHGGANVTGFQLVDFSKPMVIKLMQRWNKLDQ---REYPGSESPPRYTSSLT 296
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 297 YDGVLVMAEAFRNLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRIQGLTGNI 356
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVE-QMDKEKKEKIENRTLT 409
D GRR +++++ E S+ + +G WN L+ V+ ++ +ENRT+
Sbjct: 357 QFD-HYGRRVNYTMDVFELKSNGPRKIGYWND---LDKLVLVQNELSMGNDSAMENRTVI 412
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERE 463
VT+ + +G PY+M KN E E GY VDL IA + YK + +
Sbjct: 413 VTT--------IMEG-PYVMLKKNWEMYEGNEQFEGYCVDLASEIAKHIGIKYKISIVPD 463
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 464 GKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKP 523
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 524 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 563
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F ++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +
Sbjct: 608 FTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTL 667
Query: 811 EMGSTRNFFK 820
+ GST+ FF+
Sbjct: 668 DSGSTKEFFR 677
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 677 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYG+A P L
Sbjct: 737 TMKVGGNLDSKGYGVATPKGSQLG 760
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 420 PYVMLKKNWEMYEGNEQFEGYCVDLASEIAKHIGIKYKISIVPDGKYGARDPETKIWNGM 479
Query: 726 IGEL 729
+GEL
Sbjct: 480 VGEL 483
>gi|344293066|ref|XP_003418245.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like [Loxodonta
africana]
Length = 956
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + + NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQ----RMDNLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTKNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|410983128|ref|XP_003997895.1| PREDICTED: glutamate receptor, ionotropic kainate 5, partial [Felis
catus]
Length = 858
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDTSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|410045792|ref|XP_522168.4| PREDICTED: glutamate receptor 4 isoform 3 [Pan troglodytes]
Length = 867
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 281/583 (48%), Gaps = 58/583 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 8 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 67
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 68 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 120
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 121 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF--NDV 173
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 174 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 227
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 228 ISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPKYTS 279
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 280 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLT 339
Query: 348 GRINLDS-QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENR 406
+ DS GRR +++++ E S + +G WN L + V + + IENR
Sbjct: 340 EFLQGDSLNYGRRVNYTMDVFELKSTAKRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENR 398
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 399 TVVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAI 449
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+
Sbjct: 450 VPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMI 509
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 510 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 552
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 600 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 659
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 660 TKEFFR 665
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 665 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 724
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 725 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 769
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 409 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 468
Query: 726 IGEL 729
+GEL
Sbjct: 469 VGEL 472
>gi|405952259|gb|EKC20093.1| Glutamate receptor, ionotropic kainate 2 [Crassostrea gigas]
Length = 916
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 268/581 (46%), Gaps = 53/581 (9%)
Query: 2 KIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNAT 61
++ G FG + F+ A++++N + P + Q V D +C A
Sbjct: 41 RVDGFFGDSNIGAINMFKWAMQQLNMENLKHPGTPNANYLTQSVTGDDPFEAGNHVCEAI 100
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYF--------IPTNGVHGVNV 113
+ G IFGP + + N ++S+ + IP ++A WDP IP + VN+
Sbjct: 101 NNGSRVIFGPFTRASANHVQSVGRSLQIPVLQAHWDPRDLITNSFSRDRIPAH----VNL 156
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
YP +S+G II W T++YE D L+ Q++L+ D V +R
Sbjct: 157 YPSYGNLSQGFREIIQQFGWKNLTVLYEDDDGLIRAQEILKLEPD---------IHVYLR 207
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
++ + + ++K+ E ++LDC +IL++A + + + + +Y L+
Sbjct: 208 KMEDHPEMLYRMFIDMKDKKEYRVVLDCKTSNIFSILQKALQCNALTEDFHYFLTN---- 263
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE---NERGRSLNVRA-ETV 289
++ H VD + F+ ANIT V +I+ N + + + I E N+ S + +
Sbjct: 264 LDLHMVDLESFKYSGANITGVSLID-INSRVVAEVKSKIAESFSSNDAPYSPFYNGPQEI 322
Query: 290 KIEAALMYDAVYLFAAALQ-SLGERKPL--PTPLSCENPSSWQHGLGIGNLMKSITI-DG 345
E A +YD+V L AL +L RK L + C +W+ G + +KS T+ DG
Sbjct: 323 TTELAFIYDSVRLLGEALNGTLASRKKLNFSQAVGCGRSPAWEDGRDFYDFIKSSTVFDG 382
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG++ L G RN F L + + K +G W L M + K N
Sbjct: 383 LTGKVQL-GNFGERNMFKLNIYQLSNSNLKHIGFWEPPNSLT-------MQLIHRNKTRN 434
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
L + EPY++K + G+ G+ +D++ +A LNF Y+ + N
Sbjct: 435 PGLATYKVVVVLV------EPYVIK--KEGKYEGFCIDIMDALAQRLNFRYEVIESPNNV 486
Query: 466 YGT---LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
YG N T +G++ L +Q+ D+AI TIT R +DFT PFM LGI++L+RK
Sbjct: 487 YGNCMEFNNGTVSCDGMVKMLVDQQVDMAITGFTITHSRAKYIDFTKPFMNLGITVLFRK 546
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P P L SFL PL VW + T +LG+SL+L AR +
Sbjct: 547 PKPDPPQLMSFLAPLDNTVWAGIITVFLGISLVLLITARFT 587
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
AVSTR +A +WWFFTLI+ISSYTANLAAFLT + PI++ EDLA IK+G E GS
Sbjct: 632 AVSTRTLAAVWWFFTLILISSYTANLAAFLTVENVVSPIESAEDLASQTEIKFGTTEGGS 691
Query: 815 TRNFFK 820
T +FFK
Sbjct: 692 TMDFFK 697
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K+SN Y +M ME + P V+ +EG RV++ G YA+ ES+ IEY VE+NCDL
Sbjct: 697 KSSNNPTYLKMFDIMERANPPVWANI-EEGERRVLQ--GDYAYLSESSSIEYRVERNCDL 753
Query: 633 MQVGGLLDSKGYGIAMP 649
MQVG LDSKGYGI +P
Sbjct: 754 MQVGNWLDSKGYGIGLP 770
>gi|395854050|ref|XP_003799511.1| PREDICTED: glutamate receptor, ionotropic kainate 5 [Otolemur
garnettii]
Length = 980
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|45387863|ref|NP_991293.1| glutamate receptor, ionotropic, AMPA 1b precursor [Danio rerio]
gi|33327154|gb|AAQ08955.1| AMPA receptor subunit GluR1B [Danio rerio]
gi|190339278|gb|AAI62147.1| Glutamate receptor, ionotropic, AMPA 1b [Danio rerio]
Length = 917
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/570 (27%), Positives = 280/570 (49%), Gaps = 42/570 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F P + F A+ + N K L P V V+ S C+
Sbjct: 25 INIGGLF-PTDSHEYDVFRFALSQHNDVPK-------LVPQVDMVDTGSSFAMTYAFCSQ 76
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AI G + N++ S C + F P+ + I TN + + PE +
Sbjct: 77 FSKGVYAIIGLYDRKTMNMLMSFCGALHV----CFVTPS-FPIDTNNQFVIQLRPE---L 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ ++ W+ F +Y + L LQ++L+ A + ++ S+ L
Sbjct: 129 QDALIALVEHYKWNKFVYMYSSDSGLTVLQKILDTAAEKTWQVT----SINFDTLTEAA- 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQ-AKEVHLMGDYQNYILSLTSYWINAHTV 239
+ ++++ N E I+LDC +++ +IL A + + +Y +YIL+ + +
Sbjct: 184 -FLKAIQDLDNKKEFKIILDCELERLNSILNLIAAQKKNLKNY-HYILANLGFL----DL 237
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDA 299
+ +F+ G AN+T +++N TNP + + W+ +++ +S R +K AL YD
Sbjct: 238 NLTEFRKGGANVTGFQLMNYTNPTVSRTIQDWLEFDSKDLKSPKRR---LKYTGALTYDG 294
Query: 300 VYLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A A Q+L + R+ P+ W G+ I ++ + +G+TG + +
Sbjct: 295 VTVMATAFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVQFEGLTGHVQFN 354
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
+ G R +F++ +E+ K +G WN + T M E ++NRT VT+
Sbjct: 355 DK-GHRTNFTVSVMEFGPSGPKKVGYWNQREKYVSTATYSNMLNETF-GLQNRTYVVTTI 412
Query: 414 TFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
A +L + ++ N + GY V+L IA + ++Y+ L + YG + +T
Sbjct: 413 LEAPYVMLKKNHEQLVGNDK---YEGYCVELAAEIAKHVGYSYRLELVGDGKYGARDAET 469
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 470 MMWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSF 529
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 530 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 559
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 634 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGS 693
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 694 TKEFFR 699
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+S+ P+VFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 699 RRSKIAVFEKMWSYMKSAEPTVFVKTTDEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCD 758
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 759 TMKVGGNLDSKGYGVATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 803
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + ++Y+ L + YG + +T WNG+
Sbjct: 416 PYVMLKKNHEQLVGNDKYEGYCVELAAEIAKHVGYSYRLELVGDGKYGARDAETMMWNGM 475
Query: 726 IGEL 729
+GEL
Sbjct: 476 VGEL 479
>gi|395542485|ref|XP_003773160.1| PREDICTED: glutamate receptor 2-like [Sarcophilus harrisii]
Length = 901
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 277/556 (49%), Gaps = 52/556 (9%)
Query: 19 EIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRN 78
EIA+ R+ ++ K L S++ + L+C+ S G+ AIFG ++ N
Sbjct: 7 EIAMNRMTQEIKILSF---------------SVYFSFLVCSQFSRGVYAIFGFYDKKSVN 51
Query: 79 IIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTI 138
I S C HV +F P+ PT+G H + L +S +I WD F
Sbjct: 52 TITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAY 103
Query: 139 IYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESH 196
+Y++ L LQ VL++A + ++ ++ + + D D YR L ++++ E
Sbjct: 104 LYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDRKDETYRSLFQDLEVKKERR 159
Query: 197 ILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTV 254
++LDC DK I+ Q + H+ G +YI++ + D Q G AN++
Sbjct: 160 VILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF----TDGDLSKIQFGGANVSGF 213
Query: 255 RMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGER 313
++++ + + + W EE E T+K +AL YDAV + A ++L ++
Sbjct: 214 QIVDYEDSLVSKFVQRWSTLEEKEYP---GAHTSTIKYTSALTYDAVQVMTEAFRNLRKQ 270
Query: 314 K----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ C NP+ W G+ I +K + ++G++G I D Q G+R ++++ +
Sbjct: 271 RIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFD-QNGKRINYTINIM 329
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E ++ + +G W+ + + T E +EN+T+ VT+ V+ +
Sbjct: 330 ELKTNGPRKIGYWSEMDKMVVTLT-EIPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHE 387
Query: 428 MMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQR 487
M++ E E GY VDL IA F YK + + YG + T WNG++GEL +
Sbjct: 388 MLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGK 445
Query: 488 ADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMAT 547
AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ +
Sbjct: 446 ADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 505
Query: 548 AYLGVSLLLFFLARIS 563
AY+GVS++LF ++R S
Sbjct: 506 AYIGVSVVLFLVSRFS 521
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 634 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 693
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 694 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 738
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 569 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 628
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 629 TKEFFR 634
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 378 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 437
Query: 726 IGEL 729
+GEL
Sbjct: 438 VGEL 441
>gi|395848427|ref|XP_003796852.1| PREDICTED: glutamate receptor, ionotropic kainate 4 [Otolemur
garnettii]
Length = 956
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 273/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGVLNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLMDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|195388442|ref|XP_002052889.1| GJ17806 [Drosophila virilis]
gi|194149346|gb|EDW65044.1| GJ17806 [Drosophila virilis]
Length = 947
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 284/603 (47%), Gaps = 86/603 (14%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYD-SLHTAKLMCN 59
+ I F NE E+ F V IN + L P+++ ++ D S+ + C+
Sbjct: 25 INIGAFFYDNELELEKEFMAVVNAING--PEAEQTLRLNPLIRRLKPEDGSVILQEYACD 82
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHGVNVYPESH 118
G+AAIFGP S +I+ +C IPH+E D N +N+YP
Sbjct: 83 LIDNGVAAIFGPSSQAASDIVALVCNNTGIPHIEFDISDEEHLEEKPNHQMTLNLYPSQL 142
Query: 119 LISKGISVIINDMDWDTFTIIYETHDN--LVYLQQVLE--NAHDDDKEIRPGRPSVTIRQ 174
++SK + I+++ W FTI+Y+ D + LQ +L+ + H+D V +R+
Sbjct: 143 ILSKAYADIVHNYGWRKFTIVYDADDAKAIARLQDLLQLRDVHND---------VVRVRK 193
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYW 233
D DDYR + K IK E ++LDC+ D V +L + E L G + + L+ L +Y
Sbjct: 194 YQKD-DDYRVMWKSIK--GERRVVLDCAPDMLVELLNSSSEFGLTGQFNHIFLTNLETY- 249
Query: 234 INAH----TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-------YEENERGRSL 282
N H T D + F NIT RM+ P + + G++ YE NE R+L
Sbjct: 250 -NDHLEELTADNETFA---VNITAARMLLNPQPPAHTQLYGYVTQRDNVVYENNEPARTL 305
Query: 283 NVRAETVKIEAALMYDAVYLFAAALQSLG----ERKPLP---TPLSCENPSSWQHGLGIG 335
L++D + LFA A ++ ER +P L+ +WQ G +
Sbjct: 306 I---------HDLLHDGLQLFAQAWRNATYFYPERMLVPRMNCDLAAAGGRTWQMGRYLT 356
Query: 336 NLMKSITIDGMTGRINLDS-----QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR 390
LMK + G+ I S + G+R +F++E + +D V W+T +
Sbjct: 357 RLMKGTS--GVNSSIFRTSHLQFDEDGQRINFNIEIYD-PTDNIGV-AVWDTRGQI---- 408
Query: 391 TVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL--------YGYSV 442
T +D + ++KI R T R+ G PY +N EL GY+V
Sbjct: 409 TQLDLDMKVQKKIVYRVAT---------RI---GPPYFTRNETAMELNLTGNAIYKGYAV 456
Query: 443 DLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERR 502
DLI IA E+ F Y FV + YG + T +WNG+IGE+ A + ICDLTIT RR
Sbjct: 457 DLIDAIAQEVGFEYIFVPVADQQYGKQDKDTKQWNGIIGEIINNDAHMGICDLTITQARR 516
Query: 503 AAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARI 562
AVDFT+PFM LG+SIL K K+ +L ++LEP +VW+++ + +S L +ARI
Sbjct: 517 TAVDFTVPFMQLGVSILAYKSPHKEKELHAYLEPFGGEVWIWILISVFAMSFLKVIIARI 576
Query: 563 SSG 565
+
Sbjct: 577 ARA 579
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN ++Y+ + M + PS + K N EGVERV+ G Y F ME+T +EY E++CDL
Sbjct: 689 SNETVYRLAFNLMNNDDPSAYTKDNDEGVERVLTSFGDYMFLMETTTLEYNREQHCDLRS 748
Query: 635 VGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A LR+ +GE Y +K
Sbjct: 749 VGEKFGEKHYAIAVP---FGAEYRSNLSVAILRLSERGELYNLK 789
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL WW F +I+ +SYTANLAAFLT+++M I N++DL+ +K+G + GST N
Sbjct: 626 RLFESTWWIFAIIIANSYTANLAAFLTSSKMEGSITNLKDLSSQKEVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY +N EL GY+VDLI IA E+ F Y FV + YG + T +
Sbjct: 430 GPPYFTRNETAMELNLTGNAIYKGYAVDLIDAIAQEVGFEYIFVPVADQQYGKQDKDTKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|940272|gb|AAB37745.1| glutamate receptor subunit 2B [Oreochromis niloticus]
Length = 864
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 160/565 (28%), Positives = 279/565 (49%), Gaps = 55/565 (9%)
Query: 23 RRINKDFKALPPDII--------LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSI 74
RR ++++ A ++ L P + ++E +S C+ S G+ AIFG
Sbjct: 19 RRADQEYSAFRIGMVQFGTSEFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDK 78
Query: 75 ENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESHLISKGISVIINDMD 132
++ N I S C HV +F P+ P +G H + + P+ I + +I
Sbjct: 79 KSVNTITSFCGTL---HV-SFITPS---FPLDGSHQFIIQMRPD---IKGPLLSLIEYYK 128
Query: 133 WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIK 190
WD F +Y++ L LQ VL+ A + ++ ++ + L + D YR L ++++
Sbjct: 129 WDKFAYLYDSDRGLTTLQIVLDTAAEKKWQV----TAINVGNLKDERKDEAYRSLFQDLE 184
Query: 191 NSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
N ++LDC DK I++Q + H+ G +YI++ + I+ D Q G
Sbjct: 185 NKKHRRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-IDG---DLSKIQYGG 238
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
AN++ ++++ +P + W E + + + ++ +AL YDAV + A +
Sbjct: 239 ANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSALTYDAVQVMTEAFR 295
Query: 309 SLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
L +++ T NP+ W G+ I +K + ++G+TG I D Q G+R ++
Sbjct: 296 YLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTGNIQFD-QHGKRVNY 354
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMD--KEKKEKIENRTLTVTSKTFAKLRV 420
S+ +E S+ +G WN H V + D +EN+T+ VT+ A +
Sbjct: 355 SVNIMELKSNGPVKIGYWNEM----HKMAVTKSDVFTNDTTGMENKTVIVTTILEAPYVM 410
Query: 421 LFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 479
L + + N E Y G VDL IA F Y+ + + YG + +T WNG+
Sbjct: 411 LKKNADLFVDN----ERYEGNCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 466
Query: 480 IGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
+GE +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++
Sbjct: 467 VGEFVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAY 526
Query: 540 DVWVYMATAYLGVSLLLFFLARISS 564
++W+ + AY+GVS++LF ++R S+
Sbjct: 527 EIWMCIVFAYIGVSVVLFLVSRFSA 551
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M + PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 662 RRSKIALFDKMWTYMRGAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 721
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 722 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 766
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 727 GELQEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTAN 779
G++Q T S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTAN
Sbjct: 562 GQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 621
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LAAFLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 622 LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFR 662
>gi|345320194|ref|XP_001509334.2| PREDICTED: glutamate receptor, ionotropic kainate 5-like, partial
[Ornithorhynchus anatinus]
Length = 742
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 285/570 (50%), Gaps = 58/570 (10%)
Query: 32 LPPDIILEPIVQHVE-NYDSLHTAKLMCNATSEGIAAIFGPQSIENRN-IIESMCQMFDI 89
+P +++L IV L + +++C +G ++ GP S + +C +I
Sbjct: 1 MPAELLLLLIVAFARPGRPVLSSLRMVCQILPKGAVSVLGPSSSPASASTVSHICGEKEI 60
Query: 90 PHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLV 147
PHV+ + P ++ V++YP + +S +S I+ ++ + ++I + L+
Sbjct: 61 PHVKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNYPSASLICAKAECLL 117
Query: 148 YLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTV 207
L++++ + + ++++R L ++ D PLLKEI++ S I++D + +
Sbjct: 118 RLEELV-------RGFLISKETLSVRMLD-ESRDPTPLLKEIRDDKVSTIIIDANASISH 169
Query: 208 TILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH---- 263
IL++A E+ + + YIL+ + I + + +NI M N ++P
Sbjct: 170 LILRKASELGMTSAFYKYILTTMDFPI----LHLEGIVEDSSNILGFSMFNTSHPFYLEF 225
Query: 264 IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSC 322
+RS+ W EN A + AALM+DAV++ +A++ L + + PL+C
Sbjct: 226 VRSLNMSW--RENCEASPYPGPA----LSAALMFDAVHVVVSAVRELNRSQEIGVKPLAC 279
Query: 323 ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW-- 380
+ + WQHG + N ++ + DG+TGR+ +S+ G+R +++L +E + + +G W
Sbjct: 280 TSSNIWQHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILEKCREGHREIGVWYS 338
Query: 381 NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG- 439
N +N + +D + + N+TL VT+ PY+M+ P L G
Sbjct: 339 NRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENPYVMRRPNFQALSGN 385
Query: 440 -----YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICD 494
+ VD+++ +A L F ++ L + YG P G W G++GEL ++ADLA+
Sbjct: 386 ERFEGFCVDMLRELAELLRFRFRLRLVEDGLYGAPEPN-GSWTGMVGELINRKADLAVAA 444
Query: 495 LTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSL 554
TIT+ER +DF+ PFMTLGISILYR + P FSFL+P S VW++M AYL VS
Sbjct: 445 FTITAEREKVIDFSKPFMTLGISILYRVHIVRXPGYFSFLDPFSPAVWLFMLLAYLAVSC 504
Query: 555 LLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
+LF AR+S Y N + L R H
Sbjct: 505 VLFLAARLSP-----YEWYNPHPCLRARPH 529
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 614 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 670
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 671 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 715
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 558 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 617
Query: 814 STRNFFK 820
ST FF+
Sbjct: 618 STMTFFQ 624
>gi|380812056|gb|AFE77903.1| glutamate receptor, ionotropic kainate 5 precursor [Macaca mulatta]
Length = 980
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|940268|gb|AAB37743.1| glutamate receptor subunit 2B [Oreochromis niloticus]
Length = 864
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 278/565 (49%), Gaps = 55/565 (9%)
Query: 23 RRINKDFKALPPDII--------LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSI 74
RR ++++ A ++ L P + ++E +S C+ S G+ AIFG
Sbjct: 19 RRADQEYSAFRIGMVQFGTSEFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDK 78
Query: 75 ENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESHLISKGISVIINDMD 132
++ N I S C + +F P+ P +G H + + P+ I + +I
Sbjct: 79 KSVNTITSFCGTLHV----SFITPS---FPLDGSHQFIIQMRPD---IKGPLLSLIEYYK 128
Query: 133 WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIK 190
WD F +Y++ L LQ VL+ A + ++ ++ + L + D YR L ++++
Sbjct: 129 WDKFAYLYDSDRGLTTLQIVLDTAAEKKWQV----TAINVGNLKDERKDEAYRSLFQDLE 184
Query: 191 NSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
N ++LDC DK I++Q + H+ G +YI++ + I+ D Q G
Sbjct: 185 NKKHRRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-IDG---DLSKIQYGG 238
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
AN++ ++++ +P + W E + + + ++ +AL YDAV + A +
Sbjct: 239 ANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSK---IRYTSALTYDAVQVMTEAFR 295
Query: 309 SLGERK-----PLPTPLSCENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
L +++ T NP+ W G+ I +K + ++G+TG I D Q G+R ++
Sbjct: 296 YLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTGNIQFD-QHGKRVNY 354
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMD--KEKKEKIENRTLTVTSKTFAKLRV 420
S+ +E S+ +G WN H V + D +EN+T+ VT+ A +
Sbjct: 355 SVNIMELKSNGPVKIGYWNEM----HKMAVTKSDVFTNDTTGMENKTVIVTTILEAPYVM 410
Query: 421 LFQGEPYMMKNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 479
L + + N E Y G VDL IA F Y+ + + YG + +T WNG+
Sbjct: 411 LKKNADLFVDN----ERYEGNCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 466
Query: 480 IGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
+GE +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++
Sbjct: 467 VGEFVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAY 526
Query: 540 DVWVYMATAYLGVSLLLFFLARISS 564
++W+ + AY+GVS++LF ++R S+
Sbjct: 527 EIWMCIVFAYIGVSVVLFLVSRFSA 551
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M + M + PSVFVK+ EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 662 RRSKIALFDKMWTYMRGAEPSVFVKTTAEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 721
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 722 TMKVGGNLDSKGYGIATPKGSSL-RTPVNLAVLKLSEQGVLDKLKN 766
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 727 GELQEQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTAN 779
G++Q T S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTAN
Sbjct: 562 GQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 621
Query: 780 LAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LAAFLT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 622 LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFR 662
>gi|297277167|ref|XP_002808240.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 5-like [Macaca mulatta]
Length = 980
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|359318653|ref|XP_541594.4| PREDICTED: glutamate receptor, ionotropic kainate 5 isoform 1
[Canis lupus familiaris]
Length = 980
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDTSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|475548|gb|AAA17831.1| glutamate receptor KA2 subunit [Rattus norvegicus]
Length = 979
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + +L++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|83405893|gb|AAI10683.1| Glutamate receptor, ionotropic, kainate 5 (gamma 2) [Mus musculus]
Length = 979
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + +L++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|29029597|ref|NP_002079.3| glutamate receptor ionotropic, kainate 5 precursor [Homo sapiens]
gi|209572626|sp|Q16478.2|GRIK5_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 5;
Short=GluK5; AltName: Full=Excitatory amino acid
receptor 2; Short=EAA2; AltName: Full=Glutamate receptor
KA-2; Short=KA2; Flags: Precursor
gi|119577495|gb|EAW57091.1| glutamate receptor, ionotropic, kainate 5, isoform CRA_b [Homo
sapiens]
gi|195934813|gb|AAI68375.1| Glutamate receptor, ionotropic, kainate 5 [synthetic construct]
Length = 980
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/587 (28%), Positives = 287/587 (48%), Gaps = 64/587 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETV---KIEAALMYDAVYLFAAA 306
M N ++P +RS+ W N A T + AALM+DAV++ +A
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW---------RENCEASTYLGPALSAALMFDAVHVVVSA 317
Query: 307 LQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLE 365
++ L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLR 376
Query: 366 FVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQ 423
+E + +G W N +N + +D + + N+TL VT+
Sbjct: 377 ILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------IL 423
Query: 424 GEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWN 477
PY+M+ P L G + VD+++ +A L F Y+ L + YG P G W
Sbjct: 424 ENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWT 482
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P
Sbjct: 483 GMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPF 542
Query: 538 SFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
S VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 543 SPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|270346725|pdb|3KG2|A Chain A, Ampa Subtype Ionotropic Glutamate Receptor In Complex With
Competitive Antagonist Zk 200775
gi|270346726|pdb|3KG2|B Chain B, Ampa Subtype Ionotropic Glutamate Receptor In Complex With
Competitive Antagonist Zk 200775
gi|270346727|pdb|3KG2|C Chain C, Ampa Subtype Ionotropic Glutamate Receptor In Complex With
Competitive Antagonist Zk 200775
gi|270346728|pdb|3KG2|D Chain D, Ampa Subtype Ionotropic Glutamate Receptor In Complex With
Competitive Antagonist Zk 200775
Length = 823
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/582 (27%), Positives = 282/582 (48%), Gaps = 65/582 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 3 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 56
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C HV +F P+ PT+G H + L
Sbjct: 57 FSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRPDLK 109
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ ++ + + D
Sbjct: 110 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINNDKK 164
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 165 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 218
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAAL 295
D Q G A ++ ++++ + + + W EE E T+K +AL
Sbjct: 219 TDGDLLKIQFGGAEVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSAL 275
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G
Sbjct: 276 TYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGN 335
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQM--DKEKKEKIENRT 407
I D Q G+R ++++ +E ++ + +G W+ V++M ++ +E +T
Sbjct: 336 IKFD-QNGKRINYTINIMELKTNGPRKIGYWSE---------VDKMVLTEDDTSGLEQKT 385
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M L G Y VDL IA F YK +
Sbjct: 386 VVVTT---------ILESPYVMMKANHAALAGNERYEGYCVDLAAEIAKHCGFKYKLTIV 436
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 437 GDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 496
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 497 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 538
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 651 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 710
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG +KN
Sbjct: 711 TMKVGGNLDSKGYGIATPKGSSLGT-PVNLAVLKLSEQGLLDKLKN 755
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 586 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 645
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 646 TKEFFR 651
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M L G Y VDL IA F YK + + YG + T WNG+
Sbjct: 395 PYVMMKANHAALAGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 454
Query: 726 IGEL 729
+GEL
Sbjct: 455 VGEL 458
>gi|390479074|ref|XP_002762245.2| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 5 [Callithrix jacchus]
Length = 981
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGMWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 613 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 672
Query: 814 STRNFFK 820
ST FF+
Sbjct: 673 STMTFFQ 679
>gi|13994161|ref|NP_113696.1| glutamate receptor ionotropic, kainate 5 precursor [Rattus
norvegicus]
gi|160298215|ref|NP_032194.2| glutamate receptor ionotropic, kainate 5 precursor [Mus musculus]
gi|3287840|sp|Q63273.1|GRIK5_RAT RecName: Full=Glutamate receptor ionotropic, kainate 5;
Short=GluK5; AltName: Full=Glutamate receptor KA-2;
Short=KA2; Flags: Precursor
gi|408360125|sp|Q61626.2|GRIK5_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 5;
Short=GluK5; AltName: Full=Glutamate receptor KA-2;
Short=KA2; AltName: Full=Glutamate receptor gamma-2;
Short=GluR gamma-2; Flags: Precursor
gi|56510|emb|CAA77667.1| kainate receptor [Rattus norvegicus]
gi|148692348|gb|EDL24295.1| glutamate receptor, ionotropic, kainate 5 (gamma 2), isoform CRA_b
[Mus musculus]
gi|149056616|gb|EDM08047.1| glutamate receptor, ionotropic, kainate 5, isoform CRA_a [Rattus
norvegicus]
gi|149056617|gb|EDM08048.1| glutamate receptor, ionotropic, kainate 5, isoform CRA_a [Rattus
norvegicus]
Length = 979
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + +L++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|33989316|gb|AAH52009.2| Glutamate receptor, ionotropic, kainate 5 (gamma 2) [Mus musculus]
Length = 979
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + +L++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|220416|dbj|BAA00899.1| glutamate receptor channel subunit gamma 2 [Mus musculus]
Length = 979
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + +L++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|355567145|gb|EHH23524.1| hypothetical protein EGK_07001, partial [Macaca mulatta]
Length = 861
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMTYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|194867707|ref|XP_001972134.1| GG15353 [Drosophila erecta]
gi|190653917|gb|EDV51160.1| GG15353 [Drosophila erecta]
Length = 991
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/620 (26%), Positives = 291/620 (46%), Gaps = 93/620 (15%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 44 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 101
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 102 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---Q 157
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 158 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 210
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 211 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNH 269
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAE---- 287
W + V+F G NIT R+++ +R + E + +S N
Sbjct: 270 W-PSDVVEF-----GAINITGFRIVDSNRRAVRDFHDSRKRLEPTGQSQSQNAGGANSMP 323
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKP--------------------------LPTPLS 321
+ +AALMYDAV++ A + +KP L
Sbjct: 324 AISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNESSALLD 383
Query: 322 CENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKV 376
C + W+ G I +++ + IDG++G I D + GRR +++L VE V+ +
Sbjct: 384 CNTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSTLQQ 442
Query: 377 LGTWNTAFGL------NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM-M 429
+ W GL N++ + + N T V+S EPY+ +
Sbjct: 443 VAEWRDDAGLLPLHSHNYATSSRSASANTGDYDRNHTYIVSS---------LLEEPYLSL 493
Query: 430 KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIG 481
K GE GY DL M+A +L Y+ L ++ YG N G W+G++G
Sbjct: 494 KQYAFGESLVGNDRFEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVG 553
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
EL + AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++
Sbjct: 554 ELVRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEI 613
Query: 542 WVYMATAYLGVSLLLFFLAR 561
W+ + +YLGVS +L+F+ R
Sbjct: 614 WISVILSYLGVSFVLYFVTR 633
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 735 TFILFFIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNP 791
T + F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM
Sbjct: 679 TMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVA 738
Query: 792 PIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
PIK EDLA + YG + GST FF
Sbjct: 739 PIKTPEDLAMQTEVNYGTLLHGSTWEFF 766
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCDLM 633
S + L+ +M M +++ V + EG+ RV + KGKYA +ES EY CD M
Sbjct: 769 SQIGLHNKMWEYMNANQDQS-VHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCDTM 827
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+VG +D+KG+G+A P L K A L + GE + ++N
Sbjct: 828 KVGRNIDTKGFGVATPIGSPLRK-RLNEAVLTLKENGELFRIRN 870
>gi|426388962|ref|XP_004060896.1| PREDICTED: glutamate receptor, ionotropic kainate 5 [Gorilla
gorilla gorilla]
Length = 1117
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQSHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|17384611|emb|CAC80547.1| kainate receptor subunit KA2a [Homo sapiens]
gi|119577494|gb|EAW57090.1| glutamate receptor, ionotropic, kainate 5, isoform CRA_a [Homo
sapiens]
Length = 981
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYLGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 613 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 672
Query: 814 STRNFFK 820
ST FF+
Sbjct: 673 STMTFFQ 679
>gi|14028805|gb|AAK52502.1|AF361749_1 AMPA glutamate receptor subunit 1a short Flip isoform [Oreochromis
mossambicus]
gi|17028048|gb|AAL34305.1|L49496_1 glutamate receptor subunit 1 alpha flip form [Oreochromis
mossambicus]
Length = 908
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLV----TSVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL 780
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|17028052|gb|AAL34307.1|L49499_1 glutamate receptor subunit 1 alpha flip form [Oreochromis
mossambicus]
Length = 930
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLV----TSVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL 780
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|14028807|gb|AAK52503.1|AF361750_1 AMPA glutamate receptor subunit 1a short Flop isoform [Oreochromis
mossambicus]
gi|17028050|gb|AAL34306.1|L49497_1 glutamate receptor subunit 1 alpha flop form [Oreochromis
mossambicus]
Length = 908
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLVT----SVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL-RNPVNLAVLKLNEQGLLDKLKN 802
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|348516705|ref|XP_003445878.1| PREDICTED: glutamate receptor 1-like isoform 2 [Oreochromis
niloticus]
gi|14028801|gb|AAK52500.1|AF361747_1 AMPA glutamate receptor subunit 1a long Flip isoform [Oreochromis
mossambicus]
Length = 919
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLV----TSVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL 780
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|194744134|ref|XP_001954550.1| GF18325 [Drosophila ananassae]
gi|190627587|gb|EDV43111.1| GF18325 [Drosophila ananassae]
Length = 903
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 159/565 (28%), Positives = 273/565 (48%), Gaps = 49/565 (8%)
Query: 12 EEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENY---DSLHTAKLMCNATSEGIAAI 68
+ + FE A+ +N + P+V E +S+ +C G+ A+
Sbjct: 45 DRIRQTFEHAISVVNNELGV--------PLVGETEQVAYGNSVQAFGQLCRLMQNGVGAV 96
Query: 69 FGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVII 128
FGP + + + S+C DIP F P+ + T G N++P I+ + II
Sbjct: 97 FGPSAKHTASHLLSVCDSKDIP----FIYPHLSWSGTQA-DGFNLHPNPEDIAHVLYDII 151
Query: 129 NDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKE 188
N+ W + YE+ + L L ++ I+ R + + +Y+ +L+
Sbjct: 152 NEFQWSRYIFCYESAEYLNILDHLMNLYGIKGPVIKVIRYDLNL------NGNYKSVLRR 205
Query: 189 IKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
I+ S ++ I++ S + +L+QA++V +M + Y++ ++ HT + ++++
Sbjct: 206 IRKSEDNRIVVVGSTEGVAELLRQAQQVGIMNEDYTYVVGN----LDLHTFELEEYRYSE 261
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
NIT +RM +P +R ++ +++E + ++ + AL YDAV + A +
Sbjct: 262 VNITGIRMFSPDQEEVRDLVEK-LHQELGESEPDGQGSSSITMAMALTYDAVRVIAETTK 320
Query: 309 SLGERKPLPTPLSC-ENPSSWQ-HGLGIGNLMKSITI--DGMTGRINLDSQTGRRNSFSL 364
+L P L+C E + Q G N M+S+ I + +TGRI + R F+
Sbjct: 321 NLPYE---PQMLNCSERHDNVQPDGSTFRNYMRSLEIKENTITGRIFFEGNV--RKGFTF 375
Query: 365 EFVEYVSDQWKVLGTWNTAFGLNHSRTVEQM------DKEKKEKIENRTLTVTSKTFAKL 418
+ +E + +GTW R + + D K ++V +K +A +
Sbjct: 376 DVIELQTTGLVKVGTWEEGKKFEFQRPPQAVTFHDVDDGSLVNKTYRVLISVATKPYASI 435
Query: 419 RVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
+ ++ N + GY VDLIK +A +L F + F+ + N YG+ N T G
Sbjct: 436 ---VESIDTLIGNDQ---YQGYGVDLIKELAEKLGFNFTFI-DGGNDYGSFNKSTNTTTG 488
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++ E+ E RADLAI DLTIT+ER +DF++PFM LGI+ILY KP K P LF+F+EP S
Sbjct: 489 MLKEIVEGRADLAITDLTITAEREEVIDFSIPFMNLGIAILYVKPQKAPPALFAFMEPFS 548
Query: 539 FDVWVYMATAYLGVSLLLFFLARIS 563
+VW+Y+ AY+GVSL F L R+S
Sbjct: 549 SEVWLYLGIAYVGVSLCFFILGRLS 573
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLA-KAGRIKYGCVEM 812
+A+STR ++ +WWFFTLIM+SSYTANLAAFLT PI +V+DLA ++YG
Sbjct: 617 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNVDDVQYGAKRT 676
Query: 813 GSTRNFF 819
GSTRNFF
Sbjct: 677 GSTRNFF 683
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
Query: 562 ISSGSRLRYSAKN----SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFM 617
+ G++ S +N S +Y +M+ M S+ P + V++N+EGVE+V K KYAF M
Sbjct: 669 VQYGAKRTGSTRNFFLTSEEPIYIKMNEYM-SNNPDMLVENNQEGVEKV-KSGTKYAFLM 726
Query: 618 ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
EST IEY + + C+L +VG LD KGYGIAM + + F A L + QG +KN
Sbjct: 727 ESTSIEYNMVRECNLTKVGDALDEKGYGIAM-VKNWPYRDKFNNALLELQEQGVLARLKN 785
>gi|348516703|ref|XP_003445877.1| PREDICTED: glutamate receptor 1-like isoform 1 [Oreochromis
niloticus]
Length = 919
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLVT----SVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL-RNPVNLAVLKLNEQGLLDKLKN 802
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|403305486|ref|XP_003943296.1| PREDICTED: glutamate receptor, ionotropic kainate 5 [Saimiri
boliviensis boliviensis]
Length = 1066
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 58/584 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C ++PH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEVPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPA 545
Query: 541 VWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 VWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 584
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 669 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 725
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 726 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 770
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 614 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 673
Query: 815 TRNFFK 820
T FF+
Sbjct: 674 TMTFFQ 679
>gi|14028803|gb|AAK52501.1|AF361748_1 AMPA glutamate receptor subunit 1a long Flop isoform [Oreochromis
mossambicus]
Length = 919
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLVT----SVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL-RNPVNLAVLKLNEQGLLDKLKN 802
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|17028054|gb|AAL34308.1|L49500_1 glutamate receptor subunit 1 alpha flop form [Oreochromis
mossambicus]
Length = 930
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 261/538 (48%), Gaps = 45/538 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVMMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I W F +Y ++ L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIEHYGWSKFVYMYSSNSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + + SV + + ++ + + +++ E I++DC ++ IL+ +
Sbjct: 168 ERNWLVT----SVNVETI--SSNAFAKVFQDLDKRKEGQIIIDCETERLNNILQMIVDQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I+ W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPSVSRIVQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DSK---MPKPGLKYTGALTYDGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNED-------- 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
E+ + N T + ++T+ +L PY+M KN E + GY V+L
Sbjct: 386 -EKYVTTASLRGSNETYPLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDKYEGYIVELA 442
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + + YK + + YG +P+T WNG++GEL +AD+A+ LTIT R +
Sbjct: 443 AEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVI 502
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 503 DFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 758 TMKVGGNLDSKGYGIATPKGSHL-RNPVNLAVLKLNEQGLLDKLKN 802
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|449273868|gb|EMC83222.1| Glutamate receptor, ionotropic kainate 4, partial [Columba livia]
Length = 852
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 269/525 (51%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ + GP S + I ++C ++PH + P ++ +
Sbjct: 52 TAETMCQILPKGVVGVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFLKLQLQRFTT 109
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+ + T +I + L+ L+++L ++ + ++
Sbjct: 110 LNLHPSNTDISVAVAGILKFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 162
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D+ D PLLKEI++ + I++ + + TIL++A E+ + Y YI +
Sbjct: 163 SVRMLD-DSRDPTPLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYIFTNL 221
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ ++S+ W +EN A
Sbjct: 222 EFSLQRLDSRMDD----RVNILGFSIFNQSHAFFQEFVQSLNQSW--QENCDHAPFTGPA 275
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 276 ----LSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 331
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ ++ +G W+ + GL+ + + + N
Sbjct: 332 LTGHIEFNSK-GQRSNYALKILQHTRSGFRQIGHWHVSEGLSMDNRI--FSSNISDSLFN 388
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M EL G + VD++K +A L F YK
Sbjct: 389 TTLIVTT---------ILENPYLMLKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIH 439
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 440 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 497
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 498 LYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 542
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 643 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 699
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L QVGGLLD+KGYGI MP S F F +L+
Sbjct: 700 NEYYRQRNCNLTQVGGLLDTKGYGIGMPVGSVFRDDFDLAILQLQ 744
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T +A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 583 TIAPQALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 642
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 643 IHGGSSMTFFQ 653
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M EL G + VD++K +A L F YK L + YG P+ G W G
Sbjct: 400 PYLMLKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIHLVGDGVYGV--PEANGTWTG 457
Query: 725 LIGEL 729
++GEL
Sbjct: 458 MVGEL 462
>gi|334330115|ref|XP_001380269.2| PREDICTED: glutamate receptor, ionotropic kainate 4-like
[Monodelphis domestica]
Length = 1048
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 276/520 (53%), Gaps = 36/520 (6%)
Query: 52 HTAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVH 109
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++ + +
Sbjct: 170 ETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKLQSQRFT 227
Query: 110 GVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPS 169
+N++P + IS ++ I+ + T +I + L+ L+++L ++ + +
Sbjct: 228 TLNLHPSNTDISVAVAGILRFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDT 280
Query: 170 VTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSL 229
+++R L D+ D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 281 LSVRMLD-DSRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 339
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVR 285
+ + D NI + N ++ ++S+ W +EN +V
Sbjct: 340 LEFSLQRMDSLLDD----RVNILGFSIFNQSHAFFQEFVQSLNQSW--QEN----CDHVP 389
Query: 286 AETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITID 344
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++
Sbjct: 390 FTGPALSSALLFDAVYTVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELE 449
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG I +S+ G+R++++L+ +++ + ++ +G W+ + GL+ + + + +
Sbjct: 450 GLTGHIEFNSK-GQRSNYALKILQFTKNGFRQIGQWHVSEGLSMDNRLSSSNI--SDSLF 506
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLEREN 464
N TL VT+ ++ +G M+ + E G+ VD++K ++ L F YK L +
Sbjct: 507 NTTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELSEILRFNYKIRLVGDG 563
Query: 465 TYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 564 VYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVH 621
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 622 MGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 661
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 762 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 818
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 819 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 863
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 702 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 761
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 762 IHGGSSMTFFQ 772
>gi|47550905|ref|NP_999971.1| glutamate receptor, ionotropic, AMPA 4a precursor [Danio rerio]
gi|33327164|gb|AAQ08960.1| AMPA receptor subunit GluR4A [Danio rerio]
Length = 898
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 281/580 (48%), Gaps = 55/580 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 22 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEAPFNLVPHVDNIETANSFAVTNAFCSQ 81
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPESH 118
S G+ AIFG + + + S C I V P+ P G + + P
Sbjct: 82 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLVT----PS---FPAEGETQFVLQLRPS-- 132
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
I + +++ DW F +Y+T LQ ++E A + ++ ++ + +
Sbjct: 133 -IRGALLSLLDHYDWSRFVFLYDTDRGYAVLQAIMEKAGQNGWQVS----AICVENF--N 185
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
YR LL+++ E ++D ++ IL+Q V H+ G +YI++ +
Sbjct: 186 DASYRRLLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKG--YHYIVANLGF---- 239
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
+ + F G AN+T ++++ + P + +M W + R + ++L
Sbjct: 240 KDISLERFMHGGANVTGFQLVDFSKPMVIKLMQRWNKLDQ---REYPGSESPPRYTSSLT 296
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRI 350
YD V + A A ++L +K C NP++ W G+ + +K + I G+TG I
Sbjct: 297 YDGVLVMAEAFRNLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRIQGLTGNI 356
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVE-QMDKEKKEKIENRTLT 409
D GRR +++++ E S+ + +G WN L+ V+ ++ +ENRT+
Sbjct: 357 QFD-HYGRRVNYTMDVFELKSNGPRKIGYWND---LDKLVLVQNELSMGNDSAMENRTVI 412
Query: 410 VTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERE 463
VT+ + +G PY+M KN E E GY VDL +A + YK + +
Sbjct: 413 VTT--------IMEG-PYVMLKKNWEMYEGNEQFEGYCVDLASEVAKHIGIKYKISIVLD 463
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +P+T WNG++GEL +A++A+ L IT R +DF+ PFM+LGISI+ +KP
Sbjct: 464 GKYGARDPETKIWNGMVGELVYGKAEIAVAPLAITLVREEVIDFSKPFMSLGISIMIKKP 523
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 524 QKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 563
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F ++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +
Sbjct: 608 FTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTL 667
Query: 811 EMGSTRNFFK 820
+ GST+ FF+
Sbjct: 668 DSGSTKEFFR 677
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 677 RRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 736
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA 655
M+VGG LDSKGYG+A P L
Sbjct: 737 TMKVGGNLDSKGYGVATPKGSQLG 760
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL +A + YK + + YG +P+T WNG+
Sbjct: 420 PYVMLKKNWEMYEGNEQFEGYCVDLASEVAKHIGIKYKISIVLDGKYGARDPETKIWNGM 479
Query: 726 IGEL 729
+GEL
Sbjct: 480 VGEL 483
>gi|195126929|ref|XP_002007921.1| GI12106 [Drosophila mojavensis]
gi|193919530|gb|EDW18397.1| GI12106 [Drosophila mojavensis]
Length = 999
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 166/618 (26%), Positives = 293/618 (47%), Gaps = 90/618 (14%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 51 AIFEQGTDDVQSAFKYAM--LNHNLNVSARRFELQAYVDVINTADAFKLSRLICNQFSRG 108
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 109 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLAPSSGLLDFAISMRPDYH---Q 164
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 165 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 217
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ ++++ S+ I+LDC M K + I++ ++V L +Y+LS + ++
Sbjct: 218 MAIEFLHTMEDLGRFSKKRIVLDCPAEMAKEI-IIQHVRDVKLGRRTYHYLLSGLVMDNH 276
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE--NERGRSLNVRAETVK 290
W + V+F G NIT R+++ +R + E + G + +
Sbjct: 277 W-PSDVVEF-----GAINITGFRIVDTNRRALRDFHDSRKRLEPASGAGTAGGASQPAIS 330
Query: 291 IEAALMYDAVYLFAAALQSLGERKP-------------------------LPTPLSCENP 325
+AALMYDAV++ A + +KP L C
Sbjct: 331 AQAALMYDAVFVLVEAFNRILRKKPDQFRANHLQRRSHAGGAGGANLLNESSALLDCSTS 390
Query: 326 ----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGTW 380
+ W+ G I +++ + IDG+TG + D GRR +++L+ VE V+ + + W
Sbjct: 391 KGWVTPWEQGEKISRVLRKVEIDGLTGAVRFDDD-GRRVNYTLQVVEMSVNSTLQQVAEW 449
Query: 381 NTAFGL--------NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNP 432
G + S + + N T VTS VL EPY+M
Sbjct: 450 RDDIGFLPFHGHRSHGSSSRSTTAASNGDYTRNHTYIVTS-------VL--EEPYLMHKA 500
Query: 433 ETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP-QTGKWNGLIGELQ 484
G+ GY D+ ++IAN L ++ L ++ YG+ N G W+G++GEL
Sbjct: 501 SYGQQLVGNDRFEGYCKDMAELIANRLGIKFELRLVQDGNYGSENQFAPGGWDGMVGELV 560
Query: 485 EQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVY 544
+ AD+AI +TIT+ER +DFT PFM+LGISI+ +KP K+ P +FSFL PLS ++W+
Sbjct: 561 RKEADMAIAAMTITAERERVIDFTKPFMSLGISIMIKKPVKQTPGVFSFLNPLSQEIWIS 620
Query: 545 MATAYLGVSLLLFFLARI 562
+ +Y+GVSL+L+F+ R+
Sbjct: 621 VILSYVGVSLVLYFVTRL 638
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM PIK+
Sbjct: 692 FWYSLAAFMQQGCDLTPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKSP 751
Query: 797 EDLAKAGRIKYGCVEMGSTRNFF 819
EDLA ++YG + GST +FF
Sbjct: 752 EDLAMQTDVQYGTLLHGSTWDFF 774
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCDLM 633
S + L+ +M M ++ P + V++ EG+ RV KGKYA +ES EY CD M
Sbjct: 777 SKIGLHTKMWEYMNAN-PHLSVRTYDEGIRRVRTSKGKYALLVESPKNEYVNARAPCDTM 835
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+VG +D+KG+GIA P L + A L + GE ++N
Sbjct: 836 KVGRNIDTKGFGIATPIGSPL-RNRLNLAVLSLKENGELLKLRN 878
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 671 EPYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP-QTGKW 722
EPY+M G+ GY D+ ++IAN L ++ L ++ YG+ N G W
Sbjct: 493 EPYLMHKASYGQQLVGNDRFEGYCKDMAELIANRLGIKFELRLVQDGNYGSENQFAPGGW 552
Query: 723 NGLIGEL 729
+G++GEL
Sbjct: 553 DGMVGEL 559
>gi|348530611|ref|XP_003452804.1| PREDICTED: glutamate receptor 2 isoform 3 [Oreochromis niloticus]
Length = 887
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 288/582 (49%), Gaps = 61/582 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ + +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETLHV----SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYTS 302
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YDAV++ A + L +++ C NP+ W G+ I +K + +DG+T
Sbjct: 303 ALTYDAVHVMTEAFRFLHKQRIDISRRGNSGDCLANPAVPWAQGVEIERALKQVHVDGLT 362
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 363 GNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYPNDT 412
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + +KT +L PY+M KN E GY VDL IA Y+ +
Sbjct: 413 MGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIV 470
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 471 GDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 530
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 789
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|229892298|ref|NP_001153157.1| glutamate receptor, ionotropic, AMPA 4 precursor [Xenopus laevis]
gi|222875742|gb|ACM69013.1| ionotropic glutamate receptor subunit GluR4(Q)flop [Xenopus laevis]
Length = 902
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 278/583 (47%), Gaps = 60/583 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNESEALFNLVPHVDNIETSNSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPPLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ W+ + +Y+T LQ ++E A + ++ ++ + +
Sbjct: 140 GALLS-LLDHYGWNHYVFLYDTDRGYSILQAIMEKAGQNGWQV----SAICVENF--NDA 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+++ E+ ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRRLLEDLDRRQENKFVIDCEVERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ F G AN+T ++++ P + +M W + R K +AL YD
Sbjct: 247 ISLDRFMHGGANVTGFQLVDFNTPIVTELMQRWKTLDQ---REYPGSESPPKYTSALTYD 303
Query: 299 AVYLFAAALQSLGERKPLPTPLS-------C-ENPSS-WQHGLGIGNLMKSITIDGMTGR 349
V + A A + L +K LS C NP++ W G+ + +K + I G+TG
Sbjct: 304 GVLVMAEAFRILRRQK---VDLSRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGN 360
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTA---FGLNHSRTVEQMDKEKKEKIENR 406
I D GRR +++++ +E S+ + +G WN L H E K IENR
Sbjct: 361 IQFD-HYGRRVNYTMDVLELKSNGLRKIGYWNDMDKLVLLQH----EPAFKNDSSGIENR 415
Query: 407 TLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVL 460
T+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 416 TVIVTT---------ILESPYVMYKKNHELLEGNDKFEGYCVDLAYEIAKHIGIKYKIAI 466
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG + +T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 467 VPDGKYGARDSETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMI 526
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 527 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
K S +++Y++M + M+S+ PSVF K+ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 682 KRSKIAVYEKMWTYMKSAEPSVFTKTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 741
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 742 TMKVGGNLDSKGYGVATPKHSQLGN-AVNLAVLKLNEQGLLDKLKN 786
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 676
Query: 815 TRNFFK 820
T+ FFK
Sbjct: 677 TKEFFK 682
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + +T WNG+
Sbjct: 426 PYVMYKKNHELLEGNDKFEGYCVDLAYEIAKHIGIKYKIAIVPDGKYGARDSETKIWNGM 485
Query: 726 IGEL 729
+GEL
Sbjct: 486 VGEL 489
>gi|348530609|ref|XP_003452803.1| PREDICTED: glutamate receptor 2 isoform 2 [Oreochromis niloticus]
Length = 895
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 289/582 (49%), Gaps = 61/582 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ HV +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETL---HV-SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYTS 302
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YDAV++ A + L +++ C NP+ W G+ I +K + +DG+T
Sbjct: 303 ALTYDAVHVMTEAFRFLHKQRIDISRRGNSGDCLANPAVPWAQGVEIERALKQVHVDGLT 362
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 363 GNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYPNDT 412
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + +KT +L PY+M KN E GY VDL IA Y+ +
Sbjct: 413 MGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIV 470
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 471 GDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 530
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 789
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|348530613|ref|XP_003452805.1| PREDICTED: glutamate receptor 2 isoform 4 [Oreochromis niloticus]
Length = 887
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 288/582 (49%), Gaps = 61/582 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ + +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETLHV----SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYTS 302
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YDAV++ A + L +++ C NP+ W G+ I +K + +DG+T
Sbjct: 303 ALTYDAVHVMTEAFRFLHKQRIDISRRGNSGDCLANPAVPWAQGVEIERALKQVHVDGLT 362
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 363 GNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYPNDT 412
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + +KT +L PY+M KN E GY VDL IA Y+ +
Sbjct: 413 MGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIV 470
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 471 GDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 530
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG MKN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RVPVNLAVLKLNEQGTLDKMKN 789
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|348530615|ref|XP_003452806.1| PREDICTED: glutamate receptor 2 isoform 5 [Oreochromis niloticus]
Length = 895
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 289/582 (49%), Gaps = 61/582 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ HV +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETL---HV-SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYTS 302
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YDAV++ A + L +++ C NP+ W G+ I +K + +DG+T
Sbjct: 303 ALTYDAVHVMTEAFRFLHKQRIDISRRGNSGDCLANPAVPWAQGVEIERALKQVHVDGLT 362
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 363 GNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYPNDT 412
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + +KT +L PY+M KN E GY VDL IA Y+ +
Sbjct: 413 MGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIV 470
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 471 GDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 530
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG MKN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RVPVNLAVLKLNEQGTLDKMKN 789
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|3287839|sp|Q01812.1|GRIK4_RAT RecName: Full=Glutamate receptor ionotropic, kainate 4;
Short=GluK4; AltName: Full=Glutamate receptor KA-1;
Short=KA1; Flags: Precursor
gi|57615|emb|CAA42615.1| kainate receceptor [Rattus rattus]
Length = 956
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M ++ E + Y G+ VD++K +A L F YK
Sbjct: 416 TTLVVTT---------ILENPYLMLKGNHQDMEGNDRYEGFCVDMLKELAEILRFNYKIR 466
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 467 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FS L+P S VW++M AYL VS +LF +AR++
Sbjct: 525 LYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M ++ E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQDMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|227860|prf||1712321A kainate receptor KA-1
Length = 955
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFV 459
TL VT+ PY+M ++ E + Y G+ VD++K +A L F YK
Sbjct: 416 TTLVVTT---------ILENPYLMLKGNHQDMEGNDRYEGFCVDMLKELAEILRFNYKIR 466
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 467 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 524
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FS L+P S VW++M AYL VS +LF +AR++
Sbjct: 525 LYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M ++ E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 427 PYLMLKGNHQDMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 484
Query: 725 LIGEL 729
++GEL
Sbjct: 485 MVGEL 489
>gi|426244696|ref|XP_004016156.1| PREDICTED: glutamate receptor, ionotropic kainate 4 isoform 1 [Ovis
aries]
Length = 957
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGVLNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DARDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD+++ +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLQELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
>gi|348530607|ref|XP_003452802.1| PREDICTED: glutamate receptor 2 isoform 1 [Oreochromis niloticus]
Length = 907
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 288/582 (49%), Gaps = 61/582 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ + +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETLHV----SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYTS 302
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL YDAV++ A + L +++ C NP+ W G+ I +K + +DG+T
Sbjct: 303 ALTYDAVHVMTEAFRFLHKQRIDISRRGNSGDCLANPAVPWAQGVEIERALKQVHVDGLT 362
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I D Q G+R ++S+ +E ++ +G WN V++M K + N T
Sbjct: 363 GNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYPNDT 412
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLE 461
+ + +KT +L PY+M KN E GY VDL IA Y+ +
Sbjct: 413 MGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIV 470
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 471 GDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 530
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 531 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 789
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|301777153|ref|XP_002924003.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like
[Ailuropoda melanoleuca]
Length = 884
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 289/588 (49%), Gaps = 62/588 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPHV+ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHVKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDTSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK----PAKKQPDLFSFLEP 536
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR A ++P FSFL+P
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHITWTAGRKPGYFSFLDP 545
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
S VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 FSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 588
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 673 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVL--NSRYAFLLESTM 729
Query: 622 IEYEVEKN-CDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY N C+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 730 NEYHRRLNCCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 775
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 618 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 677
Query: 815 TRNFFK 820
T FF+
Sbjct: 678 TMTFFQ 683
>gi|431842051|gb|ELK01400.1| Glutamate receptor, ionotropic kainate 4 [Pteropus alecto]
Length = 940
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/517 (29%), Positives = 271/517 (52%), Gaps = 36/517 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 45 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 102
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 103 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 155
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 156 SVRMLD-DTWDPTPLLKEIRDDKTATIIIHANASMSHTILLKAVELGMVSAYYTYIFTNL 214
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + + NI + N ++ + S+ W +EN +V
Sbjct: 215 EFSLQ----RMDNLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 264
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 265 PGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 324
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 325 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 381
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 382 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIHLVGDGV 438
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 439 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 496
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
++P FSFL+P S VW++M AYL VS +LF +AR
Sbjct: 497 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCILFLVAR 533
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 654 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 710
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 711 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 755
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 594 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 653
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 654 IHGGSSMTFFQ 664
>gi|281352524|gb|EFB28108.1| hypothetical protein PANDA_013231 [Ailuropoda melanoleuca]
Length = 847
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 289/588 (49%), Gaps = 62/588 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPHV+ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHVKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDTSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK----PAKKQPDLFSFLEP 536
GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR A ++P FSFL+P
Sbjct: 486 GELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHITWTAGRKPGYFSFLDP 545
Query: 537 LSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
S VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 FSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 588
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 673 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVL--NSRYAFLLESTM 729
Query: 622 IEYEVEKN-CDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY N C+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 730 NEYHRRLNCCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 775
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 618 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 677
Query: 815 TRNFFK 820
T FF+
Sbjct: 678 TMTFFQ 683
>gi|432892251|ref|XP_004075728.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like [Oryzias
latipes]
Length = 969
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 272/520 (52%), Gaps = 46/520 (8%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHGVNVY 114
MC S+G+ A+ GP + N II ++C ++P+V+ A D K P +++
Sbjct: 84 MCQIMSKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPEDILKVQFPR--FTTLDLR 141
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P + IS ++ ++ + T +I + L+ L+Q+L ++ + ++++R
Sbjct: 142 PTNTDISLAVAGLLTFFNSTTACLICAQAECLLNLEQLL-------RQFLISKETLSVRM 194
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
L D+ D PLLKEI++ + I++D + + IL++A E+ ++ Y YI + + +
Sbjct: 195 LD-DSQDPTPLLKEIRDDKTATIIVDANATMSHIILERASELGMLSVYYTYIFTSLEFTL 253
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVK 290
+ D NI + N T+P ++S+ W +EN +
Sbjct: 254 ----LRLDDVADQRVNIVGFSVFNKTHPFFQDFVQSLNRSW--QEN----CDHAPFAGTP 303
Query: 291 IEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+ +AL++DAVY AA+Q L + + T LSC++ W+HG + N ++ + ++G+TG
Sbjct: 304 LSSALLFDAVYAVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGH 363
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I +S+ G+R++++L ++ + + +G W++ GL+ R + + + N TLT
Sbjct: 364 IEFNSK-GQRSNYALRIMQNSKEGLRQIGLWHSEDGLSMERM--PLSINVTDTLFNTTLT 420
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
VT+ PY+M P E G + VD+++ +A L F Y+ L +
Sbjct: 421 VTT---------ILESPYVMLKPNYQEFEGNDRYEGFCVDMLEELAELLKFKYRIRLVGD 471
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI+YR
Sbjct: 472 GLYGVPGAN-GTWTGMVGELISRKADLAVAGLTITAEREKVIDFSKPFMTLGISIMYRVH 530
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 LGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 570
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+NS YQRM + M S +PSVFVKS +EG+ RV+ YA+ +EST EY ++NC+L
Sbjct: 681 QNSRYQTYQRMWNFMHSKQPSVFVKSTEEGIARVLNSN--YAYLLESTMNEYYHQRNCNL 738
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLD+KGYG+ MP S + +F KL+
Sbjct: 739 TQIGGLLDTKGYGVGMPLGSVYRDEFDLAILKLQ 772
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 704 FVLERENTYGTLNPQ---TGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRL 760
F++ R Y NP G+ N LI Q + F + + T A+STR
Sbjct: 564 FLVARLTPYEWYNPHPCLKGQCNLLIN--QYSLGNSFWFPVGGFMQQGSTIAPRALSTRC 621
Query: 761 VAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG + GST FF+
Sbjct: 622 VSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTSIEYGTMHGGSTMTFFQ 681
>gi|351699599|gb|EHB02518.1| Glutamate receptor, ionotropic kainate 5 [Heterocephalus glaber]
Length = 1251
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 288/585 (49%), Gaps = 59/585 (10%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + +L++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LTRSQEIGIKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+ +G W N +N + +D + + N+TL VT+ P
Sbjct: 380 KSLQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILENP 426
Query: 427 YMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M+ P L G + VD+++ +A L F Y+ L + YG P G W G++
Sbjct: 427 YVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMV 485
Query: 481 GEL-QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
GEL Q+ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 486 GELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSP 545
Query: 540 DVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 546 AVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 585
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 670 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 727 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 771
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 615 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 674
Query: 815 TRNFFK 820
T FF+
Sbjct: 675 TMTFFQ 680
>gi|440907931|gb|ELR58011.1| Glutamate receptor 2, partial [Bos grunniens mutus]
Length = 824
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/517 (29%), Positives = 261/517 (50%), Gaps = 37/517 (7%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S G+ AIFG ++ N I S C HV +F P+ PT+G H +
Sbjct: 1 CSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQMRP 53
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
L +S +I WD F +Y++ L LQ VL++A + ++ ++ + +
Sbjct: 54 DLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGNINN 108
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
D D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 109 DKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF- 165
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIE 292
D Q G AN++ ++++ + + + W EE E T+K
Sbjct: 166 ---TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTTTIKYT 219
Query: 293 AALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGM 346
+AL YDAV + A ++L +++ C NP+ W G+ I +K + ++G+
Sbjct: 220 SALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGL 279
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENR 406
+G I D Q G+R ++++ +E ++ + +G W+ + + T E +EN+
Sbjct: 280 SGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENK 337
Query: 407 TLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTY 466
T+ VT+ V+ + M++ E E GY VDL IA F YK + + Y
Sbjct: 338 TVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKY 394
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 395 GARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 454
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 455 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 491
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 604 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 663
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 664 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 708
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 539 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 598
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 599 TKEFFR 604
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 348 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 407
Query: 726 IGEL 729
+GEL
Sbjct: 408 VGEL 411
>gi|328777598|ref|XP_396444.3| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1,
partial [Apis mellifera]
Length = 601
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 269/587 (45%), Gaps = 97/587 (16%)
Query: 1 MKIVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+KI IF ++++ +T AF+ AV +INK+ + + P LE +Q+V DS H +K C
Sbjct: 26 VKIGAIFTHDQKDSSTELAFKYAVYKINKE-RLILPKTTLEYDIQYVPKDDSFHASKKAC 84
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPN---KYFIPTNGVHGVNVYP 115
G+ A+FGP I S+C DIPH+EA D + K F +N+YP
Sbjct: 85 QQVKYGVQAVFGPSDPILGQHIHSICDALDIPHLEARLDLDTEAKEF-------SINLYP 137
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
L++ I+ ++W IIYE LV L++++ + + E V +RQ
Sbjct: 138 AQSLLNAAYQDIMEFLNWTKVAIIYEDDYGLVKLRELVRSPKSQEME-------VNLRQA 190
Query: 176 PPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWIN 235
PD+ YR +L E+K+ ++++D + L+ ++ M DY+ + L T +
Sbjct: 191 DPDS--YRQVLSEMKSKEIRNLIVDTRPEHMHHFLRMILQLQ-MNDYKYHYLFTT---FD 244
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAAL 295
T D +DF+ + NIT R+++ + +R I+ + G ++ ++ ++ E AL
Sbjct: 245 IETFDLEDFKYNFVNITAFRLVDAEDVGVRGILRD-MERYQPSGNTILNKSRVIQAEPAL 303
Query: 296 MYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
MYD+V +FA L++L + L P +SCE W GL + N + S+ + G++G I
Sbjct: 304 MYDSVQVFAIGLRTLEQSHALRPANISCEMEHPWDGGLSLINYINSVEMKGISGPIEF-- 361
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVE--------------------- 393
+ GRR F L+ ++ +G W G+N + T
Sbjct: 362 KEGRRIQFKLDLLKLKQHSLVKVGEWRPGIGVNVTDTAAFFEPGAANVTLLVITILEIPY 421
Query: 394 -QMDKEKKEKIENR-------TLTVTSKT--FAKLRVLFQGEPYMMKNPETGE------- 436
M EK R L ++ F+ L Y K+PETGE
Sbjct: 422 VMMHYEKNYTGNARFYGFCVDLLEAVAREVGFSYRLELVPDRKYGAKDPETGEWNGIVRE 481
Query: 437 ----------------------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
G+ +DL+K IA+ + F YK L + YG N +TG
Sbjct: 482 LMRHEQPYVMVKNRGNFSGNARYEGFCIDLLKEIAHMVGFGYKIELVPDGKYGVYNYETG 541
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+WNG+ +ADLA+ +TI R + +DFT PFM LGISIL++
Sbjct: 542 EWNGI-------KADLAVGSMTINYARESVIDFTKPFMNLGISILFK 581
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E I+++++ K L++VG G + T+ F + L +
Sbjct: 361 FKEGRRIQFKLDLLKLKQHSLVKVGEWRPGIGVNVT-DTAAFFEPGAANVTLLVITILEI 419
Query: 672 PYMMKNPE-----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M + E YG+ VDL++ +A E+ F+Y+ L + YG +P+TG+WNG++
Sbjct: 420 PYVMMHYEKNYTGNARFYGFCVDLLEAVAREVGFSYRLELVPDRKYGAKDPETGEWNGIV 479
Query: 727 GELQEQVDTFIL 738
EL +++
Sbjct: 480 RELMRHEQPYVM 491
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 31/147 (21%)
Query: 640 DSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGE----------------- 682
+++ YG + + +A+ GF+ L Y K+PETGE
Sbjct: 433 NARFYGFCVDLLEAVAR-EVGFSYRLELVPDRKYGAKDPETGEWNGIVRELMRHEQPYVM 491
Query: 683 ------------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQ 730
G+ +DL+K IA+ + F YK L + YG N +TG+WNG+ +L
Sbjct: 492 VKNRGNFSGNARYEGFCIDLLKEIAHMVGFGYKIELVPDGKYGVYNYETGEWNGIKADLA 551
Query: 731 EQVDTFILFFIYSILFFIYTFVNEAVS 757
T I + S++ F F+N +S
Sbjct: 552 VGSMT-INYARESVIDFTKPFMNLGIS 577
>gi|327286178|ref|XP_003227808.1| PREDICTED: glutamate receptor 3-like [Anolis carolinensis]
Length = 846
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 258/523 (49%), Gaps = 53/523 (10%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S G+ AIFG + N + S C +F P+ PT+ V +
Sbjct: 43 CSQFSRGVYAIFGFYDQMSMNTLTSFCGALHT----SFITPS---FPTDA--DVQFVIQM 93
Query: 118 HLISKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
KG I ++ +W+ F +Y+T LQ ++E A ++ ++ R +I+
Sbjct: 94 RPALKGAILSLLTYYNWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSMGSIK--- 149
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D +++ +++E+ E L+DC +++ TIL+Q ++ +Y+L+ +
Sbjct: 150 -DIQEFKAIIEEMDKRQEKRYLIDCEVERINTILEQVAILNKNSRSYHYMLANLGF---- 204
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEAAL 295
+ G AN+T +++N NP ++ M W+ +E E + N +K +AL
Sbjct: 205 TDISLDKVVQGGANVTGFQIVNTENPMVQQFMQRWVRLDEREFPEAKN---SPLKYTSAL 261
Query: 296 MYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGR 349
+DA+ + A A + L ++ + C NP+ W G+ I +K + + GMTG
Sbjct: 262 THDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGN 321
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMD---KEKKEKIENR 406
I D+ GRR +++++ E + G WN + R V +D +ENR
Sbjct: 322 IQFDTY-GRRTNYTIDVYEMRPGGPRKAGYWN-----EYERFVPAVDPSVSNDTSSVENR 375
Query: 407 TLTVTSKTFAKLRVLFQGEPYMMK-----NPETGELY-GYSVDLIKMIANELNFTYKFVL 460
T+ VT+ A PY+M+ E E Y GY VDL IA + Y +
Sbjct: 376 TIVVTTILEA---------PYVMRKQSPDQKEGNEKYEGYCVDLAYEIAKHVGIKYVLSI 426
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+
Sbjct: 427 VPDGKYGARDPDTKMWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMI 486
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 487 KKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 529
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 644 RRSKIAVYEKMWSYMKSAEPSVFAKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 703
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 704 TMKVGGNLDSKGYGVATPKGSAL-RNAVNLAVLKLNEQGLLDKLKN 748
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 579 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 638
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 639 TKEFFR 644
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMMK-----NPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M+ E E Y GY VDL IA + Y + + YG +P T WNG+
Sbjct: 386 PYVMRKQSPDQKEGNEKYEGYCVDLAYEIAKHVGIKYVLSIVPDGKYGARDPDTKMWNGM 445
Query: 726 IGEL 729
+GEL
Sbjct: 446 VGEL 449
>gi|195588270|ref|XP_002083881.1| GD13965 [Drosophila simulans]
gi|194195890|gb|EDX09466.1| GD13965 [Drosophila simulans]
Length = 990
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/619 (26%), Positives = 292/619 (47%), Gaps = 92/619 (14%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 44 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 101
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 102 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLAPSSGLLDFAISMRPDYH---Q 157
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 158 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 210
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 211 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNH 269
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAE---- 287
W + V+F G NIT R+++ +R + E + + +S N
Sbjct: 270 W-PSDVVEF-----GAINITGFRIVDSNRRAVRDFHDSRKRLEPSGQSQSQNAGGPNSLP 323
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKP-------------------------LPTPLSC 322
+ +AALMYDAV++ A + +KP L C
Sbjct: 324 AISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSATGTNESSALLDC 383
Query: 323 ENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVL 377
+ W+ G I +++ + IDG++G I D + GRR +++L VE V+ + +
Sbjct: 384 NTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSTLQQV 442
Query: 378 GTWNTAFGL------NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM-MK 430
W GL N++ + + N T V+S EPY+ +K
Sbjct: 443 AEWRDDAGLLPLHSHNYASSSRSASASTGDYDRNHTYIVSS---------LLEEPYLSLK 493
Query: 431 NPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGE 482
GE GY DL M+A +L Y+ L ++ YG N G W+G++GE
Sbjct: 494 QYTYGESLVGNDRFEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGE 553
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
L + AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++W
Sbjct: 554 LVRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEIW 613
Query: 543 VYMATAYLGVSLLLFFLAR 561
+ + +Y+GVS +L+F+ R
Sbjct: 614 ISVILSYVGVSFVLYFVTR 632
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 735 TFILFFIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNP 791
T + F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM
Sbjct: 678 TMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVA 737
Query: 792 PIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
PIK EDLA + YG + GST FF+
Sbjct: 738 PIKTPEDLAMQTDVNYGTLLHGSTWEFFR 766
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+ +M M +++ V + EG+ RV + KGKYA +ES EY CD
Sbjct: 766 RRSQIGLHNKMWEYMNANQHHS-VHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCD 824
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P L K
Sbjct: 825 TMKVGRNIDTKGFGVATPIGSPLRK 849
>gi|444519297|gb|ELV12724.1| Glutamate receptor 2 [Tupaia chinensis]
Length = 1375
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 283/581 (48%), Gaps = 53/581 (9%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G+F ++ +AF + + + + + L P + ++E +S C+ S G
Sbjct: 511 GLFPRGADQEYSAFRVGMVQFSTS------EFRLTPHIDNLEVANSFAVTNAFCSQFSRG 564
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ AIFG ++ N I S C + +F P+ PT+G H + L +
Sbjct: 565 VYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLKGALL 617
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--Y 182
S +I WD F +Y++ L LQ VL++A + ++ ++ + + D D Y
Sbjct: 618 S-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVT----AINVGNINNDKKDETY 672
Query: 183 RPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVD 240
R L ++++ E ++LDC DK I+ Q + H+ G +YI++ + D
Sbjct: 673 RSLFQDLELKKERRVVLDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF----TDGD 726
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKIEAALMYDA 299
Q G AN++ ++++ + + + W EE E T+K +AL YDA
Sbjct: 727 LLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYP---GAHTATIKYTSALTYDA 783
Query: 300 VYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLD 353
V + A ++L +++ C NP+ W G+ I +K + ++G++G I D
Sbjct: 784 VQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFD 843
Query: 354 SQTGRRNSFSLEFVEYVSD-QWKVLGTWNT--AFGLNHSRTVEQM--------DKEKKEK 402
Q G+R ++++ +E ++ KVL + F + + V++M
Sbjct: 844 -QNGKRINYTINIMELKTNGPRKVLASRKVFDVFQIGYWSEVDKMVVTLTELPSGNDTSG 902
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLER 462
+EN+T+ VT+ V+ + M++ E E GY VDL IA F YK +
Sbjct: 903 LENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVG 959
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 960 DGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKK 1019
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 1020 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 1060
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 1173 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 1232
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 1233 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 1277
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 1108 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 1167
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 1168 TKEFFR 1173
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 917 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 976
Query: 726 IGEL 729
+GEL
Sbjct: 977 VGEL 980
>gi|432879204|ref|XP_004073468.1| PREDICTED: glutamate receptor 1-like isoform 2 [Oryzias latipes]
Length = 921
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 261/539 (48%), Gaps = 45/539 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V+ +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I+ W F +Y + L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + ++ SV + + + + + +++ E I++DC ++ ILK+ E
Sbjct: 168 ERNWQV----TSVNVETMTEAS--FLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPTVSRIAQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DNK---MPKTGLKYTGALTYDGVKVMSMAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWN--------ED 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
+ + + N T + ++T+ +L PY+M KN E GY V+L
Sbjct: 386 EKYVTTTSFIRGSNDTYGLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDRYEGYIVELA 443
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGK-WNGLIGELQEQRADLAICDLTITSERRAA 504
IA + + YK + + YG +P+ K WNG++GEL +ADLA+ LTIT R
Sbjct: 444 AEIAKHVGYQYKLKIVSDGKYGARDPENTKMWNGMVGELVYGKADLAVAPLTITLVREEV 503
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 504 IDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 562
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 606 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 663
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 664 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 700
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 700 RRSKIAVFEKMWAYMKSADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 759
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 760 TMKVGGNLDSKGYGIATP 777
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK-WNG 724
PY+M KN E GY V+L IA + + YK + + YG +P+ K WNG
Sbjct: 418 PYVMLKKNHEQLVGNDRYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPENTKMWNG 477
Query: 725 LIGEL 729
++GEL
Sbjct: 478 MVGEL 482
>gi|432879202|ref|XP_004073467.1| PREDICTED: glutamate receptor 1-like isoform 1 [Oryzias latipes]
Length = 921
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 261/539 (48%), Gaps = 45/539 (8%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
L P V V+ +S C+ S+G+ AI G + N++ S C + F
Sbjct: 56 LVPQVDMVKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVT 111
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ + I T + + PE + + +I+ W F +Y + L LQ+VL+ A
Sbjct: 112 PS-FPIETANQFVIQLRPE---LQDALVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAA 167
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVH 217
+ + ++ SV + + + + + +++ E I++DC ++ ILK+ E
Sbjct: 168 ERNWQV----TSVNVETMTEAS--FLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQG 221
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+YIL+ + +D D + G ANIT +++N + P + I W+ +N+
Sbjct: 222 KNAKSYHYILANLGFL----DIDLTDLRKGGANITGFQLVNNSEPTVSRIAQQWMEFDNK 277
Query: 278 RGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHG 331
+ + +K AL YD V + + A Q+L R+ P+ W G
Sbjct: 278 DNK---MPKTGLKYTGALTYDGVKVMSMAFQNLRRQRIDISRRGNAGECLANPPAPWGQG 334
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRT 391
+ I ++ + IDG+TG I + + GRR ++++ +E K +G WN
Sbjct: 335 IDIQRALQQVRIDGLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWN--------ED 385
Query: 392 VEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLI 445
+ + + N T + ++T+ +L PY+M KN E GY V+L
Sbjct: 386 EKYVTTTSFIRGSNDTYGLLNRTYIVTTIL--ESPYVMLKKNHEQLVGNDRYEGYIVELA 443
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGK-WNGLIGELQEQRADLAICDLTITSERRAA 504
IA + + YK + + YG +P+ K WNG++GEL +ADLA+ LTIT R
Sbjct: 444 AEIAKHVGYQYKLKIVSDGKYGARDPENTKMWNGMVGELVYGKADLAVAPLTITLVREEV 503
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 504 IDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 562
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 606 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 663
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 664 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 700
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 700 RRSKIAVFEKMWAYMKSADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 759
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 760 TMKVGGNLDSKGYGIATP 777
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK-WNG 724
PY+M KN E GY V+L IA + + YK + + YG +P+ K WNG
Sbjct: 418 PYVMLKKNHEQLVGNDRYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPENTKMWNG 477
Query: 725 LIGEL 729
++GEL
Sbjct: 478 MVGEL 482
>gi|332855880|ref|XP_524469.3| PREDICTED: glutamate receptor, ionotropic kainate 5 [Pan
troglodytes]
Length = 915
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 272/547 (49%), Gaps = 63/547 (11%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNV 113
+C +G+ ++ GP S + +C +IPH++ + P ++ V++
Sbjct: 17 LCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSL 73
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
YP + +S +S I+ ++ + ++I + L+ L++++ + + ++++R
Sbjct: 74 YPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELV-------RGFLISKETLSVR 126
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
L D+ D PLLKEI++ S I++D + + IL++A E+ + + YIL+ +
Sbjct: 127 MLD-DSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFP 185
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETV 289
I + +NI M N ++P +RS+ W N A T
Sbjct: 186 I----LHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSW---------KENCEASTY 232
Query: 290 ---KIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ AALM+DAV++ +A++ L + + PL+C + + W HG + N ++ + DG
Sbjct: 233 LGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDG 292
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKI 403
+TGR+ +S+ G+R +++L +E + +G W N +N + +D + +
Sbjct: 293 LTGRVEFNSK-GQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTL 347
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYK 457
N+TL VT+ PY+M+ P L G + VD+++ +A L F Y+
Sbjct: 348 ANKTLVVTT---------ILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYR 398
Query: 458 FVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
L + YG P G W G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGIS
Sbjct: 399 LRLVEDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGIS 457
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNV 577
ILYR ++P FSFL+P S VW++M AYL VS +LF AR+S Y N +
Sbjct: 458 ILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHP 512
Query: 578 SLYQRMH 584
L R H
Sbjct: 513 CLRARPH 519
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 604 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 660
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 661 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 705
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 549 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 608
Query: 815 TRNFFK 820
T FF+
Sbjct: 609 TMTFFQ 614
>gi|47215057|emb|CAG03492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 200/400 (50%), Gaps = 69/400 (17%)
Query: 170 VTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSL 229
+ IRQLP DT D RPLLKE+K S E I+ DCS ILKQA+ + +M +Y +YI +
Sbjct: 78 LKIRQLPLDTQDTRPLLKEMKRSREFRIIFDCSHHMAAQILKQAQTMGMMTEYYHYIFTT 137
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
++ +D + ++ N+T R++N NP + SI+ W E R + + ++
Sbjct: 138 ----LDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSME-----RQIPPKPDSG 188
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+E + S W DG+TGR
Sbjct: 189 LLEGIMT-----------------------------SHW---------------DGLTGR 204
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
++ + TG R F L+ + + + +G W+ + GLN + ++ + + NR+L
Sbjct: 205 LSFNKTTGLRTDFDLDIISLKEEGLEKVGKWSASGGLNITEVPKRKGMNITDSLANRSLV 264
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
+++ EPY+M L G + +DL+K +A L FTY+ L +
Sbjct: 265 IST---------ILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELAGILGFTYEIRLVPD 315
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG+ + + G+WNG+I EL E RADLA+ LTIT R +DFT PFM GISILYRKP
Sbjct: 316 GKYGSQD-EKGQWNGIIRELIEHRADLAVAPLTITYMREKVIDFTKPFMNTGISILYRKP 374
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ FSFL P++ D+WVY+ AYLGVS +LF +AR S
Sbjct: 375 NATKNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFS 414
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 767 FFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
FFTLI+ISSYTANLAAFLT RM+ P+ + +D+AK +I+YG V+ G+T FFK
Sbjct: 499 FFTLIIISSYTANLAAFLTVERMDSPVDSADDIAKQTKIEYGVVKDGATMTFFK 552
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 18/131 (13%)
Query: 554 LLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKY 613
L+ F L ISS Y+A + +RM S ++S+ + GV VK+
Sbjct: 497 LVFFTLIIISS-----YTANLAAFLTVERMDSPVDSADDIAKQTKIEYGV---VKDGATM 548
Query: 614 AFFM-------ESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
FF ES+ I+Y +NC+L +VGGL+DSKGYGI S + K S A L
Sbjct: 549 TFFKGKSYRCKESSTIDYITRRNCNLTKVGGLIDSKGYGIGTQLGSPYRDKIS--IAILS 606
Query: 666 VLFQGEPYMMK 676
++ G +M+K
Sbjct: 607 IMEDGRLHMLK 617
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M L G + +DL+K +A L FTY+ L + YG+ + + G+WNG
Sbjct: 271 EPYVMLKKSDKALVGNDRFEGFCIDLLKELAGILGFTYEIRLVPDGKYGSQD-EKGQWNG 329
Query: 725 LIGELQEQVDTF------ILFFIYSILFFIYTFVNEAVS 757
+I EL E I + ++ F F+N +S
Sbjct: 330 IIRELIEHRADLAVAPLTITYMREKVIDFTKPFMNTGIS 368
>gi|348557775|ref|XP_003464694.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 5-like [Cavia porcellus]
Length = 942
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 273/544 (50%), Gaps = 57/544 (10%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNV 113
+C +G+ ++ GP S + +C +IPH++ + P ++ V++
Sbjct: 44 VCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSL 100
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
YP + +S +S I+ ++ + ++I + L+ L++++ + + ++++R
Sbjct: 101 YPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELV-------RGFLISKETLSVR 153
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
L D+ D PLLKEI++ S I++D + + +L++A E+ + + YIL+ +
Sbjct: 154 MLD-DSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFP 212
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETV 289
I + +NI M N ++P +RS+ W EN + A
Sbjct: 213 I----LHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA--- 263
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTG 348
+ AALM+DAV++ +A++ L + + PL+C + + W HG + N ++ + DG+TG
Sbjct: 264 -LSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTG 322
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENR 406
R+ +S+ G+R +++L +E + +G W N +N + +D + + N+
Sbjct: 323 RVEFNSK-GQRTNYTLRILEKSQQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANK 377
Query: 407 TLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVL 460
TL VT+ PY+M+ P L G + VD+++ +A L F Y+ L
Sbjct: 378 TLVVTT---------ILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRL 428
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG P G W G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILY
Sbjct: 429 VEDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILY 487
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLY 580
R ++P FSFL+P S VW++M AYL VS +LF AR+S Y N + L
Sbjct: 488 RVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLR 542
Query: 581 QRMH 584
R H
Sbjct: 543 ARPH 546
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 631 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 687
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 688 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 732
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 576 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 635
Query: 815 TRNFFK 820
T FF+
Sbjct: 636 TMTFFQ 641
>gi|17136702|ref|NP_476855.1| glutamate receptor I [Drosophila melanogaster]
gi|68067727|sp|Q03445.2|GLK1_DROME RecName: Full=Glutamate receptor 1; AltName: Full=Glutamate
receptor I; Short=dGLUR-I; AltName:
Full=Kainate-selective glutamate receptor; Flags:
Precursor
gi|23094076|gb|AAF50652.2| glutamate receptor I [Drosophila melanogaster]
gi|211938491|gb|ACJ13142.1| FI02103p [Drosophila melanogaster]
Length = 991
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/615 (26%), Positives = 292/615 (47%), Gaps = 83/615 (13%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 44 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 101
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 102 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLAPSSGLLDFAISMRPDYH---Q 157
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 158 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 210
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 211 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNH 269
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAE---- 287
W + V+F G NIT R+++ +R + E + + +S N
Sbjct: 270 W-PSDVVEF-----GAINITGFRIVDSNRRAVRDFHDSRKRLEPSGQSQSQNAGGPNSLP 323
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKP--------------------------LPTPLS 321
+ +AALMYDAV++ A + +KP L
Sbjct: 324 AISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNESSALLD 383
Query: 322 CENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKV 376
C + W+ G I +++ + IDG++G I D + GRR +++L VE V+ +
Sbjct: 384 CNTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSTLQQ 442
Query: 377 LGTWNTAFGL------NHSRTVEQMDKEKKEKIENRTLTVTS---KTFAKLRVLFQGEPY 427
+ W GL N++ + + N T V+S + + L+ GE
Sbjct: 443 VAEWRDDAGLLPLHSHNYASSSRSASASTGDYDRNHTYIVSSLLEEPYLSLKQYTYGESL 502
Query: 428 MMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQ 486
+ + GY DL M+A +L Y+ L ++ YG N G W+G++GEL +
Sbjct: 503 VGND----RFEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGELIRK 558
Query: 487 RADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMA 546
AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++W+ +
Sbjct: 559 EADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEIWISVI 618
Query: 547 TAYLGVSLLLFFLAR 561
+Y+GVS +L+F+ R
Sbjct: 619 LSYVGVSFVLYFVTR 633
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 735 TFILFFIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNP 791
T + F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM
Sbjct: 679 TMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVA 738
Query: 792 PIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
PIK EDL + YG + GST FF+
Sbjct: 739 PIKTPEDLTMQTDVNYGTLLYGSTWEFFR 767
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+ +M M +++ V + EG+ RV + KGKYA +ES EY CD
Sbjct: 767 RRSQIGLHNKMWEYMNANQHHS-VHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCD 825
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P L K
Sbjct: 826 TMKVGRNIDTKGFGVATPIGSPLRK 850
>gi|148692347|gb|EDL24294.1| glutamate receptor, ionotropic, kainate 5 (gamma 2), isoform CRA_a
[Mus musculus]
Length = 922
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 273/544 (50%), Gaps = 57/544 (10%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNV 113
+C +G+ ++ GP S + +C +IPH++ + P ++ V++
Sbjct: 25 VCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSL 81
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
YP + +S +S I+ ++ + ++I + L+ L++++ + + ++++R
Sbjct: 82 YPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELV-------RGFLISKETLSVR 134
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
L D+ D PLLKEI++ S I++D + + +L++A E+ + + YIL+ +
Sbjct: 135 MLD-DSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFP 193
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETV 289
I + +NI M N ++P +RS+ W EN + A
Sbjct: 194 I----LHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA--- 244
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTG 348
+ AALM+DAV++ +A++ L + + PL+C + + W HG + N ++ + DG+TG
Sbjct: 245 -LSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTG 303
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENR 406
R+ +S+ G+R +++L +E + +G W N +N + +D + + N+
Sbjct: 304 RVEFNSK-GQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANK 358
Query: 407 TLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVL 460
TL VT+ PY+M+ P L G + VD+++ +A L F Y+ L
Sbjct: 359 TLVVTT---------ILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRL 409
Query: 461 ERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILY 520
+ YG P G W G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILY
Sbjct: 410 VEDGLYGAPEPN-GSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILY 468
Query: 521 RKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLY 580
R ++P FSFL+P S VW++M AYL VS +LF AR+S Y N + L
Sbjct: 469 RVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLR 523
Query: 581 QRMH 584
R H
Sbjct: 524 ARPH 527
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 612 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 668
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 669 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 713
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 557 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 616
Query: 815 TRNFFK 820
T FF+
Sbjct: 617 TMTFFQ 622
>gi|13366253|gb|AAA86646.2| glutamate receptor AMPA/kainate type [Morone chrysops x Morone
saxatilis]
Length = 963
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 273/579 (47%), Gaps = 61/579 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F P E F A+ ++D L P V V+ +S C+
Sbjct: 27 INIGGLF-PTESHEYEVFRFALSH-HQDIPKLVPQ------VDMVKMGNSFSMTYAFCSQ 78
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AI G + N++ S C + F P+ + I T + + PE +
Sbjct: 79 FSKGVYAIIGLYDRKTVNMLMSFCGALHV----CFVTPS-FPIETANQFVIQLRPE---L 130
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I+ W F +Y + L LQ+VL+ A + + + SV + + +
Sbjct: 131 QDALVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAERNWLVT----SVNVETMTEAS- 185
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+ + +++ E I++DC ++ ILK+ E +YIL+ + +D
Sbjct: 186 -FLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQGKNAKSYHYILANLGFL----DID 240
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMN-GWIYEENERGRSLNVRAETV-----KIEAA 294
D + G ANIT +++N + P + N GW SL + K A
Sbjct: 241 LTDLRKGGANITGFQLVNNSEPSVSVSSNSGW---------SLTTKTPKCPRVDFKYTGA 291
Query: 295 LMYDAVYLFAAALQSL----------GERKPLPTPLSCENPSSWQHGLGIGNLMKSITID 344
L YD V + + A Q+L G + L P P+ W G+ I ++ + ID
Sbjct: 292 LTYDGVKVMSTAFQNLRRQRIDISRRGRGECLANP-----PAPWGQGIDIQRALQQVRID 346
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG I + + GRR ++++ +E K +G WN + + + E ++
Sbjct: 347 GLTGHIQFN-EKGRRTNYTVSVMELAPSGPKKVGYWNEDEKYVTTASFMRGSNETY-GLQ 404
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLEREN 464
NRT VT+ + +L + ++ N + GY V+L IA + + YK + +
Sbjct: 405 NRTYIVTTILESPYVMLKKNHEQLVGNDK---YEGYIVELAAEIAKHVGYQYKLKIVSDG 461
Query: 465 TYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG +P+T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP
Sbjct: 462 KYGARDPETKMWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPT 521
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 522 KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 560
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 731 EQVDTFILFFIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAF 783
EQ + F +F S+ F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAF
Sbjct: 604 EQTNEFGIF--NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAF 661
Query: 784 LTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LT RM PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 662 LTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFR 698
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 698 RRSKIAVFEKMWSYMKAADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 757
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 758 TMKVGGNLDSKGYGIATP 775
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E + GY V+L IA + + YK + + YG +P+T WNG+
Sbjct: 417 PYVMLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGM 476
Query: 726 IGEL 729
+GEL
Sbjct: 477 VGEL 480
>gi|190338000|gb|AAI62505.1| Glutamate receptor, ionotropic, AMPA 1a [Danio rerio]
Length = 914
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 276/578 (47%), Gaps = 58/578 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F P E F A+ ++D L P V V+ +S C+
Sbjct: 25 INIGGLF-PTESHEYEVFRFALSH-HQDIPKLVPQ------VDMVKLGNSFSMTYAFCSQ 76
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW---DPNKYFIPTNGVHGVNVYPES 117
S+G+ AI G + N++ S C + V + + N++ I + PE
Sbjct: 77 FSKGVYAIIGVYDRKTVNMLMSFCGALHVCFVTPSFPMENSNQFVI--------QLRPE- 127
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + +I W F +Y + L LQ+VL+ A + + + SV + +
Sbjct: 128 --LQDALVGVIEHYRWSKFVYMYSSDSGLSVLQKVLDTAAEHNWLV----TSVNVETMTE 181
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ + + +++ E I++DC +++ +ILK+ E+ +YIL+ +
Sbjct: 182 AS--FLKVFQDLDKKKEGQIIIDCELERLTSILKKIIELGKNVKSYHYILANLGFL---- 235
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D +F+ G AN+T +++N +P++ + W+ +N+ + V +K AL Y
Sbjct: 236 DIDLTEFKKGEANVTGFQLVNYADPNVSRTVQQWMEFDNKDAK---VPKRRLKYTGALTY 292
Query: 298 DAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
D V + + A Q+L R+ P+ W G+ I ++ + I+G+TG I
Sbjct: 293 DGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIEGLTGHIQ 352
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR ++S+ +E K +G WN + E ++NRT VT
Sbjct: 353 FN-EKGRRTNYSISVMELRPTGPKKVGYWNEDEKFVSTAAYMPGSNETY-GLQNRTYIVT 410
Query: 412 SKTFAKLRVLFQGEPYMM--KNPE--TG--ELYGYSVDLIKMIANELNFTYKFVLERENT 465
+ PY+M KN E TG + GY V+L IA + + Y + +
Sbjct: 411 T---------ILESPYVMLKKNHEHFTGNDKYEGYCVELAAEIAKHVGYHYILKIVADGK 461
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 462 YGARDAETMMWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTK 521
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 522 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 559
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 628 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 687
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 688 TKEFFR 693
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 693 RRSKIAVFEKMWSYMKSADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 752
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 753 TMKVGGNLDSKGYGIATP 770
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE--TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E TG + GY V+L IA + + Y + + YG + +T WNG+
Sbjct: 416 PYVMLKKNHEHFTGNDKYEGYCVELAAEIAKHVGYHYILKIVADGKYGARDAETMMWNGM 475
Query: 726 IGEL 729
+GEL
Sbjct: 476 VGEL 479
>gi|940274|gb|AAA74200.1| glutamate receptor subunit 2Ac [Oreochromis niloticus]
Length = 895
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 291/585 (49%), Gaps = 67/585 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ HV +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETL---HV-SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGALVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYPS 302
Query: 294 ALMYDAVYLFAAALQSLGERKPLPTPLS-------C-ENPS-SWQHGLGIGNLMKSITID 344
AL Y+AV++ A + L +++ T +S C NP+ W G+ I +K + +D
Sbjct: 303 ALTYNAVHVMTEAFRFLHKQR---TDISRRGNSGDCLANPAVPWATGVEIERALKQVHVD 359
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG I D Q G+R ++S+ +E ++ +G WN V++M K +
Sbjct: 360 GLTGNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYP 409
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKF 458
N T+ + +KT +L PY+M KN E GY VDL IA Y+
Sbjct: 410 NDTMGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQL 467
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI
Sbjct: 468 RIVGDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISI 527
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+P ++++W+ + AY+GVS++LF ++R S
Sbjct: 528 MIKKPQKSKPGVFSFLDPQAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKCKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L A L++ QG MKN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPLG-VPVNLAVLKLNEQGTLDKMKN 789
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|940270|gb|AAB37744.1| glutamate receptor subunit 2Ac [Oreochromis niloticus]
Length = 895
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 291/585 (49%), Gaps = 67/585 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ HV +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETL---HV-SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGALVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYPS 302
Query: 294 ALMYDAVYLFAAALQSLGERKPLPTPLS-------C-ENPS-SWQHGLGIGNLMKSITID 344
AL Y+AV++ A + L +++ T +S C NP+ W G+ I +K + +D
Sbjct: 303 ALTYNAVHVMTEAFRFLHKQR---TDISRRGNSGDCLANPAVPWATGVEIERALKQVHVD 359
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG I D Q G+R ++S+ +E ++ +G WN V++M K +
Sbjct: 360 GLTGNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYP 409
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKF 458
N T+ + +KT +L PY+M KN E GY VDL IA Y+
Sbjct: 410 NDTMGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQL 467
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI
Sbjct: 468 RIVGDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISI 527
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+P ++++W+ + AY+GVS++LF ++R S
Sbjct: 528 MIKKPQKSKPGVFSFLDPQAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKCKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 789
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|45387623|ref|NP_991161.1| glutamate receptor, ionotropic, AMPA 1a precursor [Danio rerio]
gi|33327152|gb|AAQ08954.1| AMPA receptor subunit GluR1A [Danio rerio]
Length = 914
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 156/575 (27%), Positives = 276/575 (48%), Gaps = 52/575 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F P E F A+ ++D L P V V+ +S C+
Sbjct: 25 INIGGLF-PTESHEYEVFRFALSH-HQDIPKLVPQ------VDMVKLGNSFSMTYAFCSQ 76
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AI G + N++ S C + F P+ + + + + + PE +
Sbjct: 77 FSKGVYAIIGVYDRKTVNMLMSFCGALHV----CFVTPS-FPMENSNQFVIQLRPE---L 128
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +I W F +Y + L LQ+VL+ A + + + SV + + +
Sbjct: 129 QDALVGVIEHYRWSKFVYMYSSDSGLSVLQKVLDTAAEHNWLV----TSVNVETMTEAS- 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
+ + +++ E I++DC +++ +ILK+ E+ +YIL+ + +D
Sbjct: 184 -FLKVFQDLDKKKEGQIIIDCELERLTSILKKIIELGKNVKSYHYILANLGFL----DID 238
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+F+ G AN+T +++N +P++ + W+ +N+ + V +K AL YD V
Sbjct: 239 LTEFKKGEANVTGFQLVNYADPNVSRTVQQWMEFDNKDAK---VPKRRLKYTGALTYDGV 295
Query: 301 YLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ + A Q+L R+ P+ W G+ I ++ + I+G+TG I +
Sbjct: 296 KVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIEGLTGHIQFN- 354
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
+ GRR ++S+ +E K +G WN + E ++NRT VT+
Sbjct: 355 EKGRRTNYSISVMELRPTGPKKVGYWNEDEKFVSTAAYMPGSNETY-GLQNRTYIVTT-- 411
Query: 415 FAKLRVLFQGEPYMM--KNPE--TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
PY+M KN E TG + GY V+L IA + + Y + + YG
Sbjct: 412 -------ILESPYVMLKKNHEHFTGNDKYEGYCVELAAEIAKHVGYHYILKIVADGKYGA 464
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+ +T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 465 RDAETMMWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKP 524
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 525 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 559
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 628 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAGS 687
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 688 TKEFFR 693
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+S+ PSVFVK+ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 693 RRSKIAVFEKMWSYMKSADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 752
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYGIA P
Sbjct: 753 TMKVGGNLDSKGYGIATP 770
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE--TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E TG + GY V+L IA + + Y + + YG + +T WNG+
Sbjct: 416 PYVMLKKNHEHFTGNDKYEGYCVELAAEIAKHVGYHYILKIVADGKYGARDAETMMWNGM 475
Query: 726 IGEL 729
+GEL
Sbjct: 476 VGEL 479
>gi|157511|gb|AAA28575.1| glutamate receptor subunit kainate subtype [Drosophila
melanogaster]
Length = 991
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 165/626 (26%), Positives = 293/626 (46%), Gaps = 105/626 (16%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 44 AIFEQGTDDVQSAFKYAL--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 101
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 102 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLAPSSGLLDFAISMRPDYH---Q 157
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 158 AIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 210
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++
Sbjct: 211 MAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNH 269
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET---- 288
W + V+F G NIT R+++ +R + +N + + +A+
Sbjct: 270 W-PSDVVEF-----GAINITGFRIVDSNRRAVRD------FHDNRKRLEPSAKAKARTQG 317
Query: 289 -------VKIEAALMYDAVYLFAAALQSLGERKP-------------------------- 315
+ +AALMYDAV++ A + +KP
Sbjct: 318 GPNSLPPISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNE 377
Query: 316 LPTPLSCENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-V 370
L C + W+ G I +++ + IDG++G I D + GRR +++L VE V
Sbjct: 378 SSALLDCNTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSV 436
Query: 371 SDQWKVLGTWNTAFGL------NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
+ + + W GL N++ + + N T V+S
Sbjct: 437 NSTLQQVAEWRDDAGLLPLHSHNYASSSRSASASTGDYDRNHTYIVSS---------LLE 487
Query: 425 EPYM-MKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 475
EPY+ +K GE GY DL M+A +L Y+ L ++ YG N G
Sbjct: 488 EPYLSLKQYTYGESLVGNDRFEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGG 547
Query: 476 WNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLE 535
W+G++GEL + AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL
Sbjct: 548 WDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLN 607
Query: 536 PLSFDVWVYMATAYLGVSLLLFFLAR 561
PLS ++W+ + +Y+GVS +L+F+ R
Sbjct: 608 PLSQEIWISVILSYVGVSFVLYFVTR 633
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 735 TFILFFIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNP 791
T + F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM
Sbjct: 679 TMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVA 738
Query: 792 PIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
PIK EDLA + YG + GST FF+
Sbjct: 739 PIKTPEDLAMQTDVNYGTLLHGSTWEFFR 767
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+ +M M +++ V + EG+ RV + KGKYA +ES EY CD
Sbjct: 767 RRSQIGLHNKMWEYMNANQHHS-VHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCD 825
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P L K
Sbjct: 826 TMKVGRNIDTKGFGVATPIGSPLRK 850
>gi|940266|gb|AAB37742.1| glutamate receptor subunit 2A [Oreochromis niloticus]
Length = 907
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 290/585 (49%), Gaps = 67/585 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN-KDFKALPPDIILEPIVQHVENYDSLHTAKLMCN 59
++I G+F ++ +AF + + + DF+ L P + ++E +S C+
Sbjct: 33 VQIGGLFPRGADQEYSAFRVGMVQFGMADFR-------LTPHIDNLEVANSFAVTNCFCS 85
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHG--VNVYPES 117
S G+ AIFG ++ N I S C+ + +F P+ P G++ + + P+
Sbjct: 86 QFSRGVYAIFGFYDKKSVNTITSFCETLHV----SFITPS---FPAEGMNQFVLQMRPD- 137
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I + ++ W+ F +Y++ L LQ +L+ A + + ++ + L
Sbjct: 138 --IKGALVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKWVV----TAINVGNLKD 191
Query: 178 DTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYW 233
+ D YR L ++++ E I+LDC DK I++Q + H+ G +YI++ +
Sbjct: 192 ERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF- 248
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEA 293
++ D Q G AN++ ++++ +P + W E + + R ++ +
Sbjct: 249 VDG---DLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTR---IRYPS 302
Query: 294 ALMYDAVYLFAAALQSLGERKPLPTPLS-------C-ENPS-SWQHGLGIGNLMKSITID 344
AL Y+AV++ A + L +++ T +S C NP+ W G+ I +K + +D
Sbjct: 303 ALTYNAVHVMTEAFRFLHKQR---TDISRRGNSGDCLANPAVPWATGVEIERALKQVHVD 359
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG I D Q G+R ++S+ +E ++ +G WN V++M K +
Sbjct: 360 GLTGNIQFD-QYGKRINYSVTIMELKNNGPVKIGYWNE---------VDKMVLTKSDLYP 409
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKF 458
N T+ + +KT +L PY+M KN E GY VDL IA Y+
Sbjct: 410 NDTMGMENKTVIVTTIL--EAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQL 467
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG + +T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI
Sbjct: 468 RIVGDGKYGARDAETKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISI 527
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+P ++++W+ + AY+GVS++LF ++R S
Sbjct: 528 MIKKPQKSKPGVFSFLDPQAYEIWMCIVFAYIGVSVVLFLVSRFS 572
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 620 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 679
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 680 TKEFFR 685
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++L+ +M M+++ PSVFVK EGV+RV K KGKYA+ +EST EY E K CD
Sbjct: 685 RRSKIALFDKMWQYMKNAEPSVFVKKTSEGVQRVRKCKGKYAYLLESTMNEYIEQRKPCD 744
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 745 TMKVGGNLDSKGYGIATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 789
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E GY VDL IA Y+ + + YG + +T WNG+
Sbjct: 429 PYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARDAETKIWNGM 488
Query: 726 IGEL 729
+GEL
Sbjct: 489 VGEL 492
>gi|351695994|gb|EHA98912.1| Glutamate receptor, ionotropic kainate 4, partial [Heterocephalus
glaber]
Length = 817
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 247/459 (53%), Gaps = 32/459 (6%)
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 32 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 84
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 85 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 143
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 144 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 193
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 194 TGPALSSALLFDAVYAVVMAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 253
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 254 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFN 310
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 311 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 367
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 368 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 425
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 426 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 464
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 565 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 621
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 622 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 666
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 505 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 564
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 565 IHGGSSMTFFQ 575
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 322 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 379
Query: 725 LIGEL 729
++GEL
Sbjct: 380 MVGEL 384
>gi|242019761|ref|XP_002430327.1| glutamate receptor 1 precursor, putative [Pediculus humanus
corporis]
gi|212515451|gb|EEB17589.1| glutamate receptor 1 precursor, putative [Pediculus humanus
corporis]
Length = 836
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 267/533 (50%), Gaps = 67/533 (12%)
Query: 68 IFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVI 127
+ G S + + S F +P V W P K T + + ++P+ H K I +
Sbjct: 1 MLGAVSSNAFDTLYSYSNTFHVPFVTP-WFPEKVLNATTEDYAITLWPDYH---KAIIDM 56
Query: 128 INDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV---TIRQLPPDTDDYRP 184
+ +WD IY++HD L+ LQQ+ E GR + ++++ +TD
Sbjct: 57 VVRYEWDKVIYIYDSHDGLIRLQQI--------DETLIGRQNFHVEAVKRIINETDAIEF 108
Query: 185 LLK--EIKNSSESHILLDCSMD-KTVTILKQAKEVHLMGDYQNYILS-LTSYWINAHTVD 240
LL+ ++ +I+LDC + I+ + L +Y+LS L S ++ +
Sbjct: 109 LLRIEKMNTWGNKYIILDCPAELAKKIIISHVRNERLGRRTYHYLLSGLASSIMDD---E 165
Query: 241 FQDFQP-GYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDA 299
++ P G NIT ++++ R + ++ R SL ++ + ALMYDA
Sbjct: 166 WETSIPYGSVNITGFKIVDRN----RKFVKDFLEMRRRRFSSLGGNQNSISAQFALMYDA 221
Query: 300 VYLFAAALQSLGERKPL-------------PTPLSCENPSS-------WQHGLGIGNLMK 339
V++ A L ++KP + L C S W+HG I ++
Sbjct: 222 VFVIVEAFNKLFKKKPEVGESLKRGPLFNNGSRLDCYANYSNNTWVTPWEHGDKISKHLR 281
Query: 340 SITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGTWNTAFGLNHSRTVEQMDKE 398
+ ++G+TG + + GRR +F+L+ V+ ++ + +G W+ +GL+ + +
Sbjct: 282 KVEMEGLTGDVKFNEH-GRRRNFTLQVVKMSLNSVLQRVGNWSDVYGLSLEFEPKTIKPI 340
Query: 399 KKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNP-ETGELY-------GYSVDLIKMIAN 450
++E N+T VTS EPY+M P +TG Y GY DL ++A
Sbjct: 341 EQEIDRNKTYIVTS---------IIEEPYIMAKPNDTGVKYEGNDRYEGYCKDLADLVAK 391
Query: 451 ELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMP 510
+LN Y+ L ++ YG+ N Q G+W+G++GEL + AD+AI +TITSER+ A+DF+ P
Sbjct: 392 KLNIKYELRLVKDKVYGSKN-QHGEWDGMVGELIRKEADMAIASMTITSERQKAIDFSKP 450
Query: 511 FMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FM+LGISI+ +KP K++P +FSFL PLS ++WV + +YL VS++LF ++R S
Sbjct: 451 FMSLGISIMIKKPVKQKPGVFSFLNPLSKEIWVSVIFSYLAVSVVLFIVSRFS 503
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA ++YG + GS
Sbjct: 562 SISGRIVGCVWWFFTLILISSYTANLAAFLTVERMVTPINSPEDLASQTEVEYGTLTNGS 621
Query: 815 TRNFF 819
T FF
Sbjct: 622 TWEFF 626
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+++GS + +K S ++L+ +M M +SR VFVKS EG+ RV KGKYA +ES
Sbjct: 617 LTNGSTWEFFSK-SQITLFNKMWEFM-NSRKHVFVKSYDEGIRRVRDSKGKYALLIESPK 674
Query: 622 IEYEVEKN-CDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+Y E+ CD M+VG LD+KG+GIA L K A L ++ GE +KN
Sbjct: 675 NDYTNERQPCDTMKVGRNLDAKGFGIATALHSPLMK-EINLAVLELIENGELTKLKN 730
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 671 EPYMMKNP-ETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 722
EPY+M P +TG Y GY DL ++A +LN Y+ L ++ YG+ N Q G+W
Sbjct: 358 EPYIMAKPNDTGVKYEGNDRYEGYCKDLADLVAKKLNIKYELRLVKDKVYGSKN-QHGEW 416
Query: 723 NGLIGEL 729
+G++GEL
Sbjct: 417 DGMVGEL 423
>gi|355703592|gb|EHH30083.1| hypothetical protein EGK_10670 [Macaca mulatta]
Length = 920
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 170/609 (27%), Positives = 293/609 (48%), Gaps = 74/609 (12%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +E
Sbjct: 321 LNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRILE 379
Query: 369 YVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR------- 419
+ +G W N +N + +D + + N+TL VT+ + R
Sbjct: 380 KSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTTILVSGPRRGPGSDL 435
Query: 420 -------VLF----------QGEPYMMKNPETGELYG------YSVDLIKMIANELNFTY 456
VLF PY+M+ P L G + VD+++ +A L F Y
Sbjct: 436 MATVVSFVLFPRFEDKEAGHTENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRY 495
Query: 457 KFVLERENTYGTLNPQTGKWNGLIGEL-QEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
+ L + YG P G W G++GEL Q+ADLA+ TIT+ER +DF+ PFMTLG
Sbjct: 496 RLRLVEDGLYGAPEPN-GSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLG 554
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNS 575
ISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S Y N
Sbjct: 555 ISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNP 609
Query: 576 NVSLYQRMH 584
+ L R H
Sbjct: 610 HPCLRARPH 618
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 703 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 759
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY NC+L Q+GGLLD+KGYGI MP
Sbjct: 760 NEYHRRLNCNLTQIGGLLDTKGYGIGMP 787
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 648 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 707
Query: 815 TRNFFK 820
T FF+
Sbjct: 708 TMTFFQ 713
>gi|195015106|ref|XP_001984137.1| GH15168 [Drosophila grimshawi]
gi|193897619|gb|EDV96485.1| GH15168 [Drosophila grimshawi]
Length = 994
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 168/625 (26%), Positives = 296/625 (47%), Gaps = 102/625 (16%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 50 AIFEQGTDDVQSAFKYAM--LNHNLNVSARRFELQAYVDVINTADAFKLSRLICNQFSRG 107
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV--HGVNVYPESHLISK 122
+ ++ G S ++ + + S F +P V W P K P++G+ +++ P+ H +
Sbjct: 108 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTP-WFPEKVLTPSSGLLDFAISMRPDYH---Q 163
Query: 123 GISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD-- 180
I I+ W + +Y++HD L+ LQQ+ + E++PG + ++ + +
Sbjct: 164 AIIDTIHYYGWQSIIYLYDSHDGLLRLQQIYQ-------ELKPGNETFRVQMVKRIANVT 216
Query: 181 ---DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSY 232
++ ++++ S+ I+LDC M K + I++ ++V L +Y+LS + ++
Sbjct: 217 MAIEFLHTMEDLGRFSKKRIVLDCPAEMAKEI-IIQHVRDVKLGRRTYHYLLSGLVMDNH 275
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNV-------R 285
W + V+F G NIT R+++ +R ++ +R +V
Sbjct: 276 W-PSDVVEF-----GAINITGFRIVDTNRRALRDF-----HDSRKRLEPASVPNTAGGGN 324
Query: 286 AETVKIEAALMYDAVYLFAAALQSLGERKP-------------------------LPTPL 320
+ +AALMYDAV++ A + +KP L
Sbjct: 325 LPAISAQAALMYDAVFVLVEAFNRILRKKPDQFRANHLQRRSHAGGSGASGALNESSALL 384
Query: 321 SCENP----SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWK 375
C + W+ G I +++ + IDG+TG + D GRR +++L+ VE V+ +
Sbjct: 385 DCNTSKGWVTPWEQGEKISRVLRKVEIDGLTGAVRFDDD-GRRVNYTLQVVEMSVNSTLQ 443
Query: 376 VLGTW--NTAF--------GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGE 425
+ W +T F G +HS + N T VTS VL E
Sbjct: 444 QVAEWRDDTGFLPFHGQRGGYSHSSNSRSSVASNGDYTRNHTYIVTS-------VL--EE 494
Query: 426 PYMMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP-QTGKWN 477
PY+M G+ GY DL ++IA L + L ++ +YG N G W+
Sbjct: 495 PYLMHKAGYGQQLVGNERFEGYCKDLAELIATRLGIKIELRLVQDGSYGAENQFAPGGWD 554
Query: 478 GLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPL 537
G++GEL + AD+AI +TIT+ER +DFT PFM+LGISI+ +KP K+ P +FSFL PL
Sbjct: 555 GMVGELLRKEADIAIAAMTITAERERVIDFTKPFMSLGISIMIKKPVKQTPGVFSFLNPL 614
Query: 538 SFDVWVYMATAYLGVSLLLFFLARI 562
S ++W+ + +Y+GVS++L+F+ R+
Sbjct: 615 SQEIWMSVIFSYVGVSIVLYFVTRL 639
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F YS+ F+ + +V+ R+ A +WWFFT+I+ISSYTANLAAFLT RM PIK+
Sbjct: 688 FWYSLAAFMQQGCDMTPPSVAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKSP 747
Query: 797 EDLAKAGRIKYGCVEMGSTRNFF 819
EDLA ++YG + GST +FF
Sbjct: 748 EDLAMQTDVQYGTLLHGSTWDFF 770
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCDLM 633
S + L+ +M M ++ P + V + EG+ RV KGKYA +ES EY CD M
Sbjct: 773 SKIGLHSKMWEYMNAN-PHLSVHTYDEGIRRVRTSKGKYALLVESPKNEYVNARAPCDTM 831
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+VG +D+KG+GIA P L + A L + GE ++N
Sbjct: 832 KVGRNIDTKGFGIATPIGSPL-RNRLNLAVLSLKENGELLKLRN 874
>gi|47222566|emb|CAG02931.1| unnamed protein product [Tetraodon nigroviridis]
Length = 908
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/598 (26%), Positives = 284/598 (47%), Gaps = 67/598 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I G+F + + +AF AV+ N + L V ++E+ +S C+
Sbjct: 27 INIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEKPFHLNYNVDNLESSNSFSVTHAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVHGVNVYPESH 118
S G+ AIFG ++ N + S C + + D + F+ + + P
Sbjct: 87 FSRGVYAIFGFYDRKSMNTLTSFCGALHTSFITPSFPIDADVQFV-------IQMRPG-- 137
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLV----------------------YLQQVLENA 156
+ I ++ W+ F +Y+T ++ LQ ++E+A
Sbjct: 138 -LRGAILSLLAHYKWEKFVYLYDTDRAVLGAAKNSISVEAMLVSWAVLCFSILQAIMESA 196
Query: 157 HDDDKEIRPGRPSVTIRQLPPDTD--DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAK 214
++ + VT R + D ++R +++E+ E L+DC +++ +IL+Q
Sbjct: 197 VANNWQ-------VTARSVGNIVDPIEFRRIIEEMDRRQEKRFLIDCEVNRINSILEQVV 249
Query: 215 EVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYE 274
+YIL+ + + G ANIT ++I+P +P ++ + W E
Sbjct: 250 TSGKNSRGYHYILANLGF----SNMSLDRVFSGGANITGFQIISPDSPIVQQFLQRW--E 303
Query: 275 ENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SW 328
+ + +K +AL +DA+ + A A + L ++ + C NP+ W
Sbjct: 304 RLDEREFPEAKNTPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPW 363
Query: 329 QHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNH 388
G+ I +K + + GMTG I D+ GRR +++++ E S + +G WN +
Sbjct: 364 SQGIDIERALKMVQVQGMTGNIQFDT-FGRRANYTIDVYEMKSGGPRRIGYWN-----EY 417
Query: 389 SRTVEQMDKE---KKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLI 445
+ V MD++ + +ENRT+ VT+ A V+++ M + E GY VDL
Sbjct: 418 EKFVYVMDQQVTNESSSVENRTIVVTTIMEAPY-VMYKKNYMQMDGNDRYE--GYCVDLA 474
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
IA + YK + + YG +P+T WNG++GEL RAD+A+ LTIT R +
Sbjct: 475 SEIAKHVGIRYKLSIVPDGKYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVREEVI 534
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 535 DFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 592
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 706 RRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVSRVRKSKGKFAFLLESTMNEYIEQRKPCD 765
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 766 TMKVGGNLDSKGYGVATPKGSALGN-AVNLAVLKLNEQGLLDKLKN 810
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 640 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 699
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 700 STKEFFR 706
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 468 GYCVDLASEIAKHVGIRYKLSIVPDGKYGARDPETKTWNGMVGEL 512
>gi|281347827|gb|EFB23411.1| hypothetical protein PANDA_001966 [Ailuropoda melanoleuca]
Length = 926
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 270/519 (52%), Gaps = 42/519 (8%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 55 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 112
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N F + L+ L+++L ++ + ++
Sbjct: 113 LNLHPSNTDISVAVAGVLN------FFNCCAKAECLLNLEKLL-------RQFLISKDTL 159
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 160 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 218
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 219 EFSLQRMDSLMDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 268
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 269 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 328
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 329 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 385
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 386 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 442
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 443 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 500
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 501 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 539
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 640 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 696
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY +++C+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 697 NEYYRQRDCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 741
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 580 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 639
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 640 IHGGSSMTFFQ 650
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 397 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 454
Query: 725 LIGEL 729
++GEL
Sbjct: 455 MVGEL 459
>gi|410915018|ref|XP_003970984.1| PREDICTED: glutamate receptor 4-like isoform 1 [Takifugu rubripes]
Length = 905
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 283/577 (49%), Gaps = 48/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 28 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + +
Sbjct: 88 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFTLQLRPSIR 140
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ DW+ F +Y+T LQ ++E A ++ ++ ++ + +
Sbjct: 141 GALLS-LLDHYDWNKFVFLYDTDRGYAILQAIMERAGQNNWQVS----AICVESF--NDA 193
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL ++ E ++D ++ +L+Q V H+ G +YI++ +
Sbjct: 194 SYRRLLDDLDRRQEKKFVIDLEAERLQNMLEQIVSVGKHVKG--YHYIMANLGF----KD 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
++ + F G AN+T ++++ +NP + +M W + R K +AL YD
Sbjct: 248 INLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDTPPKYTSALTYD 304
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + + G+TG +
Sbjct: 305 GVMVMAEAFRNLRRQKVDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNVQF 364
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E ++ + +G WN A L + + + +ENRT+ VT+
Sbjct: 365 D-HYGRRVNYTMDVFELKNNGPRRIGYWNDADKLVLIQDSPLLPNDTT-GLENRTVVVTT 422
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
+ +G PY+M KN E E GY VDL IA + YK + + Y
Sbjct: 423 --------IMEG-PYVMLKKNWEMYEGNDQYEGYCVDLAAEIAKHIGIKYKISIVPDGKY 473
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 GARDPDTKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 533
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWGYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 744 TMKVGGNLDSKGYGVATPKGSQL-RSAVNLAVLKLNEQGLLDKLKN 788
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P T WNG+
Sbjct: 427 PYVMLKKNWEMYEGNDQYEGYCVDLAAEIAKHIGIKYKISIVPDGKYGARDPDTKIWNGM 486
Query: 726 IGEL 729
+GEL
Sbjct: 487 VGEL 490
>gi|426229958|ref|XP_004009050.1| PREDICTED: glutamate receptor 1 isoform 3 [Ovis aries]
Length = 811
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 230/450 (51%), Gaps = 37/450 (8%)
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLL 186
II+ W F IY+ L LQ+VL+ A + + ++ + L + YR L
Sbjct: 41 IIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLF 94
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
++++ E +++DC ++ IL Q ++ G +YIL+ + +D F+
Sbjct: 95 QDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDIDLNKFKE 150
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAA 305
AN+T +++N T+ IM W +N R V + K +AL YD V + A
Sbjct: 151 SGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAE 207
Query: 306 ALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
A QSL ++ C NP+ W G+ I ++ + +G+TG + + + GRR
Sbjct: 208 AFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRR 266
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
+++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 267 TNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT------- 318
Query: 420 VLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T
Sbjct: 319 --ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDT 376
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 377 KAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF 436
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 437 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 466
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 514 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 573
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 574 TKEFFR 579
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 579 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 638
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + A L++ QG
Sbjct: 639 TMKVGGNLDSKGYGIATPKGSAL-RGPVNLAVLKLSEQG 676
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 322 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 381
Query: 725 LIGEL 729
++GEL
Sbjct: 382 MVGEL 386
>gi|441596061|ref|XP_004087287.1| PREDICTED: glutamate receptor 1 [Nomascus leucogenys]
Length = 811
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 230/450 (51%), Gaps = 37/450 (8%)
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLL 186
II+ W F IY+ L LQ+VL+ A + + ++ + L + YR L
Sbjct: 41 IIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLF 94
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
++++ E +++DC ++ IL Q ++ G +YIL+ + +D F+
Sbjct: 95 QDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKE 150
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAA 305
AN+T +++N T+ IM W +N R V + K +AL YD V + A
Sbjct: 151 SGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAE 207
Query: 306 ALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
A QSL ++ C NP+ W G+ I ++ + +G+TG + + + GRR
Sbjct: 208 AFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRR 266
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
+++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 267 TNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT------- 318
Query: 420 VLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T
Sbjct: 319 --ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDT 376
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 377 KAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF 436
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 437 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 466
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 514 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 573
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 574 TKEFFR 579
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 579 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 638
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + A L++ QG
Sbjct: 639 TMKVGGNLDSKGYGIATPKGSAL-RGPVNLAVLKLSEQG 676
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 322 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 381
Query: 725 LIGEL 729
++GEL
Sbjct: 382 MVGEL 386
>gi|301756554|ref|XP_002914121.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like
[Ailuropoda melanoleuca]
Length = 950
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 270/519 (52%), Gaps = 42/519 (8%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N F + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGVLN------FFNCCAKAECLLNLEKLL-------RQFLISKDTL 183
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 184 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 242
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 243 EFSLQRMDSLMDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 292
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 293 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 352
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 353 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFN 409
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 410 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 466
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 467 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 524
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 525 GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 563
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 664 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 720
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY +++C+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 721 NEYYRQRDCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 765
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 604 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 663
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 664 IHGGSSMTFFQ 674
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 421 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 478
Query: 725 LIGEL 729
++GEL
Sbjct: 479 MVGEL 483
>gi|241843886|ref|XP_002415465.1| EAA5, putative [Ixodes scapularis]
gi|215509677|gb|EEC19130.1| EAA5, putative [Ixodes scapularis]
Length = 736
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 277/558 (49%), Gaps = 52/558 (9%)
Query: 16 TAFEIAVRRINKDFKA-LPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSI 74
F+ A+ +N+D L PDI+ P+V + DS + C +G+AAIFGP S
Sbjct: 4 VVFQAAIDIVNEDSSVNLEPDIL--PVVDILPEDDSYEAVRDACRLLEQGVAAIFGPMSG 61
Query: 75 ENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWD 134
+ + S+C ++PH+E WDP + +N++P +++++ + ++ +W
Sbjct: 62 VSSVHVSSVCDSLNVPHLETRWDP----FMEDSDDSINIFPHPNVLAEAYTALMKYWEWS 117
Query: 135 TFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSE 194
I+Y+ D +V L+ +L+ +D E+ S R +D +R +LK+IK +
Sbjct: 118 ALAILYDEDDAIVQLKDLLQELREDGIEV-----SYFFRN---SSDSFRDVLKKIKEAEY 169
Query: 195 SHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTV 254
+I + + LKQA ++ ++G+ NY+ + H D DF ANIT +
Sbjct: 170 VNIFVAIEDEDLEVFLKQAMQIEMLGEEYNYLFMSLDF----HVADLSDFIYAKANITAL 225
Query: 255 RMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK 314
R+++ +P + I I E R SL A L V F A + L R+
Sbjct: 226 RIVDVEDP-VADIFQKKIDENLLRTLSL----------ATLRLTIVKHFVAKKKYLELRQ 274
Query: 315 PLPT----PLSCENPSSWQHGLGIGNL-MKSITIDGMTGRINLDSQTGRRNSFSLEFVEY 369
+ T +S E ++ GI N + DG+TG + D G R F L E
Sbjct: 275 VIGTKSRHSMSSEVLATPAITYGIYNAHFPQVAFDGLTGTVKFDEH-GFRKDFQLYVTEL 333
Query: 370 VSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM 429
+D + +GTW+ GLN ++ D+E+K + V S +F VL + P+++
Sbjct: 334 GTDGLEEIGTWSPTSGLNITK-----DEEEKGDDVVLRVVVISVSF----VLHK--PFVI 382
Query: 430 -KNPETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 486
N E G + G+ VDL++ ++ L+F Y+ + YG+L + G+WNG++GEL
Sbjct: 383 VNNDEDGSPKFSGFCVDLLQELSAMLDFKYELHASYDGRYGSLQ-EDGQWNGMVGELTNG 441
Query: 487 RADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP-DLFSFLEPLSFDVWVYM 545
ADLA+ DLTIT +R VDFT+PFM+ G++I+ +K +P ++SF PL+ +VWVY+
Sbjct: 442 NADLAMADLTITEQRERVVDFTLPFMSTGLAIVTKKGEPMRPGGIWSFFLPLTREVWVYV 501
Query: 546 ATAYLGVSLLLFFLARIS 563
A +++ AR+S
Sbjct: 502 ILATTCTIFVMYIGARLS 519
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ GS ++ ++S V L+QR+ S +E + ++ S +G++RV K++ K AF ME+
Sbjct: 618 VHHGSSQKF-LQDSKVPLHQRISSLVERNYRNL-PTSVGDGLQRV-KDEDKVAFVMETAS 674
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLR 665
Y +++C+ + + YG A P S + +K S G KL+
Sbjct: 675 AAYATQEDCNFSRTDPFVFHSAYGFATPRDSPYRSKLSEGILKLQ 719
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 738 LFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVE 797
LF + ++L T A +TR++AG W+FFT I+++ +NL + P +
Sbjct: 546 LFVVTTLLHQRITLDPRAPATRVLAGFWYFFTFIILAIIVSNLCESILWEDDGPDYDTAQ 605
Query: 798 DLAKAGRIKYGCVEMGSTRNFFK 820
+L +A Y V GS++ F +
Sbjct: 606 ELLRARGFTYVVVHHGSSQKFLQ 628
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 674 MMKNPETG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
++ N E G + G+ VDL++ ++ L+F Y+ + YG+L + G+WNG++GEL
Sbjct: 382 IVNNDEDGSPKFSGFCVDLLQELSAMLDFKYELHASYDGRYGSLQ-EDGQWNGMVGEL 438
>gi|384381486|ref|NP_001244949.1| glutamate receptor 1 isoform 4 [Homo sapiens]
Length = 811
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 230/450 (51%), Gaps = 37/450 (8%)
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLL 186
II+ W F IY+ L LQ+VL+ A + + ++ + L + YR L
Sbjct: 41 IIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLF 94
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
++++ E +++DC ++ IL Q ++ G +YIL+ + +D F+
Sbjct: 95 QDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKE 150
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAA 305
AN+T +++N T+ IM W +N R V + K +AL YD V + A
Sbjct: 151 SGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAE 207
Query: 306 ALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
A QSL ++ C NP+ W G+ I ++ + +G+TG + + + GRR
Sbjct: 208 AFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRR 266
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
+++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 267 TNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT------- 318
Query: 420 VLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T
Sbjct: 319 --ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDT 376
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 377 KAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF 436
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 437 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 466
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 514 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 573
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 574 TKEFFR 579
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 579 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 638
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + A L++ QG
Sbjct: 639 TMKVGGNLDSKGYGIATPKGSAL-RGPVNLAVLKLSEQG 676
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 322 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 381
Query: 725 LIGEL 729
++GEL
Sbjct: 382 MVGEL 386
>gi|344243674|gb|EGV99777.1| Glutamate receptor 2 [Cricetulus griseus]
Length = 876
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 254/518 (49%), Gaps = 51/518 (9%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
KL+C+ S G+ AIFG ++ N I S C HV +F P+ PT+G H +
Sbjct: 39 KLVCSQFSRGVYAIFGFYDKKSVNTITSFCGTL---HV-SFITPS---FPTDGTHPFVIQ 91
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
L +S +I WD F +Y++ L LQ VL++A + ++ ++ +
Sbjct: 92 MRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TAINVGN 146
Query: 175 LPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSY 232
+ D D YR L ++++ E ++LDC DK I+ Q
Sbjct: 147 INNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQG------------------- 187
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENERGRSLNVRAETVKI 291
D Q G AN++ ++++ + + + W EE E T+K
Sbjct: 188 ---FTDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY---PGAHTATIKY 241
Query: 292 EAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDG 345
+AL YDAV + A ++L +++ C NP+ W G+ I +K + ++G
Sbjct: 242 TSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEG 301
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
++G I D Q G+R ++++ +E ++ + +G W+ + + T E +EN
Sbjct: 302 LSGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLEN 359
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
+T+ VT+ V+ + M++ E E GY VDL IA F YK + +
Sbjct: 360 KTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGK 416
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 417 YGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 476
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 477 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 514
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 627 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 686
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 687 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 731
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 562 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 621
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 622 TKEFFR 627
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 371 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 430
Query: 726 IGEL 729
+GEL
Sbjct: 431 VGEL 434
>gi|47209848|emb|CAF88978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1093
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/585 (27%), Positives = 286/585 (48%), Gaps = 56/585 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKL---- 56
++I G+F N ++ TAF +A+ N A L P V ++E +S
Sbjct: 106 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNACKSV 165
Query: 57 ----MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVN 112
+C+ S G+ AIFG + + + S C I + P+ PT G
Sbjct: 166 GLLRVCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFT 218
Query: 113 VYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTI 172
+ + +S +++ DW+ F +Y+T LQ ++E A ++ ++ ++ +
Sbjct: 219 LQLRPSIRGALLS-LLDHYDWNKFVFLYDTDRGYAILQAIMERAGQNNWQVS----AICV 273
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLT 230
+ YR LL+++ E ++D ++ +L+Q V H+ G +YI++
Sbjct: 274 ENF--NDASYRRLLEDLDRRQEKKFVIDLEAERLQNMLEQIVSVGKHVKG--YHYIMANL 329
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVK 290
+ ++ + F G AN+T ++++ +NP + +M W + R K
Sbjct: 330 GF----KDINLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDTPPK 382
Query: 291 IEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITID 344
+AL YD V + A A ++L +K C NP++ W G+ + +K + +
Sbjct: 383 YTSALTYDGVMVMAEAFRNLRRQKVDISRRGNAGDCLANPAAPWNQGVDMERTLKQVRLQ 442
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG + D GRR +++++ E ++ + +G W+ A L + + + +E
Sbjct: 443 GLTGNVQFD-HYGRRVNYTMDVFELKNNGPRRIGYWSDADKLVLIQDSPLLPNDTT-GLE 500
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKF 458
NRT+ VT+ + +G PY+M KN E E GY VDL IA + YK
Sbjct: 501 NRTVVVTT--------IMEG-PYVMLKKNWEMYEGNDQFEGYCVDLAAEIAKHIGIKYKI 551
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG +P+T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI
Sbjct: 552 SIVPDGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISI 611
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 612 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 656
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 831 RRSKIAVYEKMWGYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 890
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 891 TMKVGGNLDSKGYGVATPKGSQL-RSAVNLAVLKLNEQGLLDKLKN 935
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F ++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +
Sbjct: 762 FHQRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESSEDLAKQTDIAYGTL 821
Query: 811 EMGSTRNFFK 820
+ GST+ FF+
Sbjct: 822 DSGSTKEFFR 831
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 513 PYVMLKKNWEMYEGNDQFEGYCVDLAAEIAKHIGIKYKISIVPDGKYGARDPETKIWNGM 572
Query: 726 IGEL 729
+GEL
Sbjct: 573 VGEL 576
>gi|410949413|ref|XP_003981416.1| PREDICTED: glutamate receptor 1 isoform 3 [Felis catus]
Length = 811
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 230/450 (51%), Gaps = 37/450 (8%)
Query: 127 IINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLL 186
II+ W F IY+ L LQ+VL+ A + + ++ + L + YR L
Sbjct: 41 IIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLF 94
Query: 187 KEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQP 246
++++ E +++DC ++ IL Q ++ G +YIL+ + +D F+
Sbjct: 95 QDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKE 150
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAA 305
AN+T +++N T+ IM W +N R V + K +AL YD V + A
Sbjct: 151 SGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAE 207
Query: 306 ALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
A QSL ++ C NP+ W G+ I ++ + +G+TG + + + GRR
Sbjct: 208 AFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRR 266
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
+++L +E D + +G WN + T Q + ++NRT VT+
Sbjct: 267 TNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT------- 318
Query: 420 VLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T
Sbjct: 319 --ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDT 376
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSF
Sbjct: 377 KAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF 436
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 437 LDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 466
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 514 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 573
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 574 TKEFFR 579
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 579 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 638
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQG 670
M+VGG LDSKGYGIA P L + A L++ QG
Sbjct: 639 TMKVGGNLDSKGYGIATPKGSAL-RGPVNLAVLKLSEQG 676
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 322 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 381
Query: 725 LIGEL 729
++GEL
Sbjct: 382 MVGEL 386
>gi|112821109|emb|CAI61935.1| EGFP-GluR2 fusion protein [Cloning vector pGFP-GluR2-Sin]
Length = 1128
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 281/573 (49%), Gaps = 41/573 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F ++ +AF + + + + + L P + ++E +S C+
Sbjct: 272 IQIGGLFPRGADQEYSAFRVGMVQFS------TSEFRLTPHIDNLEVANSFAVTNAFCSQ 325
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG ++ N I S C + +F P+ PT+G H + L
Sbjct: 326 FSRGVYAIFGFYDKKSVNTITSFCGTLHV----SFITPS---FPTDGTHPFVIQMRPDLK 378
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +I WD F +Y++ L LQ VL++A + ++ + + + D
Sbjct: 379 GALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV----TRINVGNINNDKK 433
Query: 181 D--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINA 236
D YR L ++++ E ++LDC DK I+ Q + H+ G +YI++ +
Sbjct: 434 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKG--YHYIIANLGF---- 487
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALM 296
D Q G AN++ ++++ + + ER + ++ +K +AL
Sbjct: 488 TDGDLLKIQFGGANVSGFQIVDYDDSWCLKFYRKMVNTGRER-IPWSTHSD-IKYTSALT 545
Query: 297 YDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRI 350
YDAV + A ++L +++ C NP+ W G+ I +K + ++G++G I
Sbjct: 546 YDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNI 605
Query: 351 NLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTV 410
D Q G+R ++++ +E ++ + +G W+ + + T E +EN+T+ V
Sbjct: 606 KFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT-ELPSGNDTSGLENKTVVV 663
Query: 411 TSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLN 470
T+ V+ + M++ E E GY VDL IA F YK + + YG +
Sbjct: 664 TT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARD 720
Query: 471 PQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDL 530
T WN ++GEL +AD+AI LTIT R +DF+ PFM+LGISI+ +KP K +P +
Sbjct: 721 ADTKIWNNMVGELDYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 780
Query: 531 FSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 781 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 813
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 926 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 985
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 986 TMKVGGNLDSKGYGIATPKGSSLGN-AVNLAVLKLNEQGLLDKLKN 1030
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDL+K I YG ++ GS
Sbjct: 861 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGS 920
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 921 TKEFFR 926
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WN +
Sbjct: 670 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNNM 729
Query: 726 IGEL 729
+GEL
Sbjct: 730 VGEL 733
>gi|410915020|ref|XP_003970985.1| PREDICTED: glutamate receptor 4-like isoform 2 [Takifugu rubripes]
Length = 905
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 282/577 (48%), Gaps = 48/577 (8%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 28 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 87
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + I
Sbjct: 88 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFTLQLRPS-I 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ +++ DW+ F +Y+T LQ ++E A ++ ++ ++ + +
Sbjct: 140 RGALLSLLDHYDWNKFVFLYDTDRGYAILQAIMERAGQNNWQVS----AICVESF--NDA 193
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL ++ E ++D ++ +L+Q V H+ G +YI++ +
Sbjct: 194 SYRRLLDDLDRRQEKKFVIDLEAERLQNMLEQIVSVGKHVKG--YHYIMANLGF----KD 247
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
++ + F G AN+T ++++ +NP + +M W + R K +AL YD
Sbjct: 248 INLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQ---REYPGSDTPPKYTSALTYD 304
Query: 299 AVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINL 352
V + A A ++L +K C NP++ W G+ + +K + + G+TG +
Sbjct: 305 GVMVMAEAFRNLRRQKVDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNVQF 364
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTS 412
D GRR +++++ E ++ + +G WN A L + + + +ENRT+ VT+
Sbjct: 365 D-HYGRRVNYTMDVFELKNNGPRRIGYWNDADKLVLIQDSPLLPNDTT-GLENRTVVVTT 422
Query: 413 KTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTY 466
+ +G PY+M KN E E GY VDL IA + YK + + Y
Sbjct: 423 --------IMEG-PYVMLKKNWEMYEGNDQYEGYCVDLAAEIAKHIGIKYKISIVPDGKY 473
Query: 467 GTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK 526
G +P T WNG++GEL +A++A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 474 GARDPDTKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKS 533
Query: 527 QPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 534 KPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 570
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M M+S+ P+VF K+ EGV RV K KGKYAF +EST EY E K CD
Sbjct: 684 RRSKIAVYEKMWGYMKSAEPTVFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCD 743
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VGG LDSKGYG+A P
Sbjct: 744 TMKVGGNLDSKGYGVATP 761
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 618 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDIAYGTLDSG 677
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 678 STKEFFR 684
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG +P T WNG+
Sbjct: 427 PYVMLKKNWEMYEGNDQYEGYCVDLAAEIAKHIGIKYKISIVPDGKYGARDPDTKIWNGM 486
Query: 726 IGEL 729
+GEL
Sbjct: 487 VGEL 490
>gi|55846828|gb|AAV67418.1| glutamate receptor ionotropic AMPA2 [Macaca fascicularis]
Length = 610
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 174/628 (27%), Positives = 294/628 (46%), Gaps = 109/628 (17%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 34 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 91
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 92 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 144
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 145 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 203
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 204 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 253
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 254 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 313
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 314 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 370
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 371 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 427
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 428 YGV-------------------------PLTITAEREKVIDFSKPFMTLGISILYRVHMG 462
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS---------------------- 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 463 RKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQY 522
Query: 564 ---------------SGSRLRYSA------------KNSNVSLYQRMHSAMESSRPSVFV 596
GS + A +NS YQRM + M S +PSVFV
Sbjct: 523 SLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWFFQNSRYQTYQRMWNYMYSKQPSVFV 582
Query: 597 KSNKEGVERVVKEKGKYAFFMESTGIEY 624
KS +EG+ RV+ YAF +EST EY
Sbjct: 583 KSTEEGIARVL--NSNYAFLLESTMNEY 608
>gi|198462024|ref|XP_002135712.1| GA22545 [Drosophila pseudoobscura pseudoobscura]
gi|198140165|gb|EDY70955.1| GA22545 [Drosophila pseudoobscura pseudoobscura]
Length = 681
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 261/521 (50%), Gaps = 54/521 (10%)
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVY 114
+++C G+ AIF P I S+C DIP + + +NV+
Sbjct: 25 RVVCRLVQVGVQAIFSPTDSVLATHINSICDALDIPDIGR----------STHDFSINVH 74
Query: 115 PESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQ 174
P ++ +I ++W F I+YE ++ L Q+ R + V +R+
Sbjct: 75 PSQQYVNNAFIDVIRYLNWTRFGILYEKDYGIINLHQLS----------RSIQAEVHMRK 124
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
+ + Y +L E KN +I++D S D +LK + M +Y+ Y TS+
Sbjct: 125 VSQAS--YLSVLNEFKNKEIHNIIIDISSDGITALLKNILQ-QQMNEYK-YHYFFTSF-- 178
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW------IYEENERGRSLNVRAET 288
+ T D +DF+ + NIT+ R+++ + ++ I+ I++E++ L +A T
Sbjct: 179 DLETFDLEDFKYNFVNITSFRLVDIGDVAVKEILKDLEFFGRTIFQESDANLYLR-KAVT 237
Query: 289 VKIEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSSWQHGLGIGNLMKSITIDGMT 347
++ E AL++D+VY+FA LQ+L + L + L+C++ W GL + N + ++ G+T
Sbjct: 238 IETEPALIFDSVYVFAIGLQTLEQSHTLYLSNLTCDDEIPWNGGLSLINYINAVEWKGLT 297
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G I + G+R F L+ ++ +G W LN + E ++ +
Sbjct: 298 GPIQF--KEGQRVQFKLDLIKLKQHSIVKVGEWTPQGYLNIT--------EPSVFFDSGS 347
Query: 408 LTVTSKTFAKLRVLFQGEPYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLER 462
+ VT L PY+M KN E YG+ VD+++ I++E+ F Y L
Sbjct: 348 MNVTLVVITILET-----PYVMMHYGKNFTGNERFYGFCVDILETISHEVGFDYILDLVP 402
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG +P+TG+WNG++ +L + +ADLA+ +TIT R + +DFT PFM LGISIL++
Sbjct: 403 DRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKV 462
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P + LFSF+ PL+ ++W+Y+ AY VS+ ++ + ++S
Sbjct: 463 PESEPTRLFSFMNPLAIEIWIYVLIAYFLVSISIYIVGKLS 503
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+++ +W FF+LI+++SYTANLAAFLT RM PI+N +DLA I YG +E GS
Sbjct: 548 ATSTRIISSIWGFFSLIIVASYTANLAAFLTTERMINPIENADDLATQTEISYGTLESGS 607
Query: 815 TRNFFK 820
T FF+
Sbjct: 608 TMTFFR 613
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M +M++ + + F + ++G+ RV +G YAF MEST
Sbjct: 603 LESGSTMTF-FRDSMIETYKKMWRSMDNKKQA-FTTTYEDGIRRV--NQGNYAFLMESTM 658
Query: 622 IEYEVEKNCDLMQVGGLLDSKG 643
++Y V+++C+L Q+GGLLD+KG
Sbjct: 659 LDYIVQRDCNLTQIGGLLDTKG 680
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 642 KGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMM----KNPETGE-LYGYSVDLIKMIAN 696
+GY S F S + + PY+M KN E YG+ VD+++ I++
Sbjct: 331 QGYLNITEPSVFFDSGSMNVTLVVITILETPYVMMHYGKNFTGNERFYGFCVDILETISH 390
Query: 697 ELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 731
E+ F Y L + YG +P+TG+WNG++ +L +
Sbjct: 391 EVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMK 425
>gi|357607113|gb|EHJ65357.1| hypothetical protein KGM_17294 [Danaus plexippus]
Length = 927
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 264/557 (47%), Gaps = 50/557 (8%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
AF+ AV RINK+ LP ++ I Q+ DS T K C G AIF
Sbjct: 40 AFKYAVYRINKERNLLPESTLVYDI-QYTTTRDSFRTYKKACTQIKSGAIAIFSSAGPLL 98
Query: 77 RNIIESMCQMFDIPHVEAFWDPNKYFIPTNGV---HGVNVYPESHLISKGISVIINDMDW 133
+ + +MC+ PH+ + + + G+ + +N+YP L+ + ++W
Sbjct: 99 GSTLSAMCRTLHAPHLTV----APHVVESPGLCCDYTINLYPSRDLLDTAFVDLTAFLNW 154
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
IIYE + N + + R GR +R ++ DYR L ++K
Sbjct: 155 TRMGIIYEDYGN---------GELNIVRLARDGRDMYAVR---CESRDYRRALAQLKAQD 202
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
HI++D K + +L +A + L + +NY T++ + D +DF N++
Sbjct: 203 IKHIIVDTD-PKHLRLLSRAI-LQLQMNNENYHYIFTTF--DMELFDLEDFLYNRVNMSG 258
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGER 313
R+++ + ++ ++ + E+ + + +K E AL+YDAV + A AL S R
Sbjct: 259 WRLVDRDSDKVKDVLT--VMEKFHPIGASILSGGHIKTEPALIYDAVQVLALALAS--TR 314
Query: 314 KPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
T SC+ ++ +G + + + G+TG I + G R +F+L+ + +++
Sbjct: 315 DVSATNASCDTETTVAYGSVLLENINKVQAHGLTGPIAFTN--GNRKTFNLQLMRLSAER 372
Query: 374 WKVL--GTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN 431
+ G W GL V +++ N TLTV V + +PY+M
Sbjct: 373 RAAVLAGHWTKDGGLE----VTDPAAYRRDPPPNVTLTV---------VTVEEKPYVMVK 419
Query: 432 -----PETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 486
G+ +DL+ +A F+Y+ L N YG +P TG+WNG++ EL ++
Sbjct: 420 EGWNLQGNARFEGFCIDLLARVAARAGFSYRLRLVPGNVYGARDPATGQWNGIVRELVDR 479
Query: 487 RADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMA 546
+AD+A+ +TI R A +DFT PFM LGI IL++ P+ + LFSFL PL+ ++W+Y+
Sbjct: 480 KADIAVASMTINYAREAVIDFTKPFMNLGIGILFKVPSSQPTRLFSFLNPLAVEIWLYVL 539
Query: 547 TAYLGVSLLLFFLARIS 563
AY+ VS LF +AR S
Sbjct: 540 AAYILVSFTLFVMARFS 556
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+S GS + + ++SN+ +YQRM M + P V S +EGV RV+ G YAF MEST
Sbjct: 657 LSGGSTMTF-FRDSNIDIYQRMWDHMSRASPPALVASYEEGVRRVLA--GNYAFLMESTM 713
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIA 647
+++ V+++C+L QVGGLLDSKGYGIA
Sbjct: 714 LDHRVQRDCNLTQVGGLLDSKGYGIA 739
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A STR+V G+WWFFTLI++SSYTANLAAFLT R PI++ DLA ++YG + G
Sbjct: 601 KATSTRIVGGIWWFFTLIILSSYTANLAAFLTVERTVLPIQSAADLAAQNSVQYGTLSGG 660
Query: 814 STRNFFK 820
ST FF+
Sbjct: 661 STMTFFR 667
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 666 VLFQGEPYMMKN-----PETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 720
V + +PY+M G+ +DL+ +A F+Y+ L N YG +P TG
Sbjct: 408 VTVEEKPYVMVKEGWNLQGNARFEGFCIDLLARVAARAGFSYRLRLVPGNVYGARDPATG 467
Query: 721 KWNGLIGELQEQ 732
+WNG++ EL ++
Sbjct: 468 QWNGIVRELVDR 479
>gi|440904906|gb|ELR55358.1| Glutamate receptor, ionotropic kainate 4, partial [Bos grunniens
mutus]
Length = 926
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 270/518 (52%), Gaps = 42/518 (8%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 55 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 112
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N + T +I + L+ L+++L ++ + ++
Sbjct: 113 LNLHPSNTDISVAVAGVLNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 165
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 166 SVRMLD-DARDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 224
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 225 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 274
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGM 346
+ +AL++DAVY A +G + PLSC + WQHG + N ++ + ++G+
Sbjct: 275 TGPALSSALLFDAVYAVVTA--EIGVK-----PLSCGSAQIWQHGTSLMNYLRMVELEGL 327
Query: 347 TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENR 406
TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 328 TGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRL--YASNISDSLFNT 384
Query: 407 TLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTY 466
TL VT+ ++ +G M+ + E G+ VD+++ +A L F YK L + Y
Sbjct: 385 TLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLQELAEILRFNYKIRLVGDGVY 441
Query: 467 GTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
G P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 442 GV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMG 499
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 500 RRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 537
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 638 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 694
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 695 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 739
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 578 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 637
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 638 IHGGSSMTFFQ 648
>gi|297458788|ref|XP_002684364.1| PREDICTED: glutamate receptor 4, partial [Bos taurus]
Length = 839
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 265/545 (48%), Gaps = 58/545 (10%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWD 97
+E + N S ++ L+C+ S G+ AIFG + + + S C I +
Sbjct: 1 VESTILKCANSFSSSSSILVCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT---- 56
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAH 157
P+ PT G + L +S +++ +W+ F +Y+T LQ ++E A
Sbjct: 57 PS---FPTEGESQFVLQLRPSLRGALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAG 112
Query: 158 DDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV- 216
+ + ++ + +YR LL+E+ E ++DC +++ IL+Q V
Sbjct: 113 QNGWHVS----AICVENF--SDVNYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVG 166
Query: 217 -HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE 275
H+ G +YI++ + + + F G AN+T ++++ P + +M+ W
Sbjct: 167 KHVKG--YHYIIANLGF----KDISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW---- 216
Query: 276 NERGRSLNVR----AETV-KIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENP 325
+ L+ R +ET K +AL YD V + A +SL +K C NP
Sbjct: 217 ----KKLDQREYPGSETPPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANP 272
Query: 326 SS-WQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAF 384
++ W G+ + +K + I G+TG + D GRR +++++ E S + +G WN
Sbjct: 273 AAPWGQGIDMERTLKQVQIQGLTGNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMD 331
Query: 385 GLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LY 438
L + V + + IENRT+ VT+ PY+M KN E E
Sbjct: 332 KLVLIQDVPTLGNDTA-AIENRTVVVTT---------IMESPYVMYKKNHEMFEGNDKYE 381
Query: 439 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTIT 498
GY VDL IA + YK + + YG + T WNG++GEL +A++AI LTIT
Sbjct: 382 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTIT 441
Query: 499 SERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFF 558
R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF
Sbjct: 442 LVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFL 501
Query: 559 LARIS 563
++R S
Sbjct: 502 VSRFS 506
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 554 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 613
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 614 TKEFFR 619
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 619 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 678
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 679 TMKVGGNLDSKGYGVATPKGSSL 701
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 363 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 422
Query: 726 IGEL 729
+GEL
Sbjct: 423 VGEL 426
>gi|300797900|ref|NP_001179555.1| glutamate receptor, ionotropic kainate 4 precursor [Bos taurus]
Length = 957
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 267/519 (51%), Gaps = 36/519 (6%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGVLNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DARDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L + + +G W+ A GL+ + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYTLSVLASPRAGTREIGQWHVADGLSMDSRL--YASNISDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD+++ +A L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLQELAEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 531 GRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
>gi|148693596|gb|EDL25543.1| glutamate receptor, ionotropic, kainate 4, isoform CRA_a [Mus
musculus]
Length = 934
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 269/525 (51%), Gaps = 42/525 (8%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 51 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVRFQLQRFTT 108
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 109 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 161
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTV------TILKQAKEVHLMGDYQN 224
++R L DT D PLLKEI++ + I++ + L A E+ ++ Y
Sbjct: 162 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASHVAHHPPEGGSLAGAAELGMVSAYYT 220
Query: 225 YILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGR 280
YI + + + D NI + N ++ + S+ W +EN
Sbjct: 221 YIFTNLEFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFSQSLNQSW--QEN---- 270
Query: 281 SLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMK 339
+V + +AL++DAVY A+Q L + + PLSC + WQHG + N ++
Sbjct: 271 CDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLR 330
Query: 340 SITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEK 399
+ ++G+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ +
Sbjct: 331 MVELEGLTGHIEFNSK-GQRSNYALKILQFTRNGFQQIGQWHVAEGLSMDSRL--YASNI 387
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFV 459
+ + N TL VT+ ++ +G M+ + E G+ VD++K +A L F YK
Sbjct: 388 SDSLFNTTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIR 444
Query: 460 LERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
L + YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISI
Sbjct: 445 LVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISI 502
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LYR ++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 503 LYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 547
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 648 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 704
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 705 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 749
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 588 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 647
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 648 IHGGSSMTFFQ 658
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 672 PYMM-----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNG 724
PY+M + E + Y G+ VD++K +A L F YK L + YG P+ G W G
Sbjct: 405 PYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTG 462
Query: 725 LIGEL 729
++GEL
Sbjct: 463 MVGEL 467
>gi|355755881|gb|EHH59628.1| hypothetical protein EGM_09783 [Macaca fascicularis]
Length = 976
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 278/569 (48%), Gaps = 73/569 (12%)
Query: 57 MCNATSEGIAAIFGPQSIENRN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNV 113
+C +G+ ++ GP S + +C +IPH++ + P ++ V++
Sbjct: 88 VCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSL 144
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIR 173
YP + +S +S I+ ++ + ++I + L+ L++++ + + ++++R
Sbjct: 145 YPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELV-------RGFLISKETLSVR 197
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYW 233
L D+ D PLLKEI++ S I++D + + IL++A E+ + + YIL+ +
Sbjct: 198 MLD-DSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFP 256
Query: 234 INAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETV 289
I + +NI M N ++P +RS+ W EN + A
Sbjct: 257 I----LHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA--- 307
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTG 348
+ AALM+DAV++ +A++ L + + PL+C + + W HG + N ++ + DG+TG
Sbjct: 308 -LSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTG 366
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENR 406
R+ +S+ G+R +++L +E + +G W N +N + +D + + N+
Sbjct: 367 RVEFNSK-GQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANK 421
Query: 407 TLTVTSKTFAKLR--------------VLF----------QGEPYMMKNPETGELYG--- 439
TL VT+ + R VLF PY+M+ P L G
Sbjct: 422 TLVVTTILVSGPRRGPGSDLMATVVSFVLFPRFEDKEAGHTENPYVMRRPNFQALSGNER 481
Query: 440 ---YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL-QEQRADLAICDL 495
+ VD+++ +A L F Y+ L + YG P G W G++GEL Q+ADLA+
Sbjct: 482 FEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGMVGELINRQKADLAVAAF 540
Query: 496 TITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLL 555
TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S VW++M AYL VS +
Sbjct: 541 TITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCV 600
Query: 556 LFFLARISSGSRLRYSAKNSNVSLYQRMH 584
LF AR+S Y N + L R H
Sbjct: 601 LFLAARLSP-----YEWYNPHPCLRARPH 624
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 709 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 765
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY NC+L Q+GGLLD+KGYGI MP
Sbjct: 766 NEYHRRLNCNLTQIGGLLDTKGYGIGMP 793
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 653 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 712
Query: 814 STRNFFK 820
ST FF+
Sbjct: 713 STMTFFQ 719
>gi|344287962|ref|XP_003415720.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 4-like
[Loxodonta africana]
Length = 886
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 271/572 (47%), Gaps = 54/572 (9%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F N ++ TAF +A+ N A L P V ++E +S C+
Sbjct: 27 VQIGGLFIRNTDQEYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQ 86
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S G+ AIFG + + + S C I + P+ PT G + L
Sbjct: 87 YSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRPSLR 139
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+S +++ +W+ F +Y+T LQ ++E A + + ++ + +
Sbjct: 140 GALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVS----AICVENF--NDV 192
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 193 SYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 246
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
+ + F G AN+T ++++ P + +M+ W + ++R + V +E D
Sbjct: 247 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW-KKLDQREYPGSETPPKVIMEKRQKID 305
Query: 299 AVYLFAAALQSLGERKPLPTPLSCENPSS-WQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
+ R L NP++ W G+ + +K + I G+TG + D G
Sbjct: 306 -----------ISRRGNAGDCLX--NPAAPWGQGIDMERTLKQVRIQGLTGNVQFD-HYG 351
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
RR +++++ E S + +G WN L + V + + IENRT+ VT+
Sbjct: 352 RRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRTVVVTT----- 405
Query: 418 LRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PY+M KN E E GY VDL IA + YK + + YG +
Sbjct: 406 ----IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDA 461
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +KP K +P +F
Sbjct: 462 DTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVF 521
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 522 SFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 553
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 601 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 660
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 661 TKEFFR 666
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 666 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 725
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 726 TMKVGGNLDSKGYGVATPKGSSL 748
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 410 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 469
Query: 726 IGEL 729
+GEL
Sbjct: 470 VGEL 473
>gi|426244698|ref|XP_004016157.1| PREDICTED: glutamate receptor, ionotropic kainate 4 isoform 2 [Ovis
aries]
Length = 957
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 269/520 (51%), Gaps = 38/520 (7%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFIKFQFQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ ++N + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGVLNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DARDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 249 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
+TG I +S+ G+R++++L + + W++ G W+ A GL+ + + +
Sbjct: 359 LTGHIEFNSK-GQRSNYTLSVLASPRAGTWEI-GQWHVADGLSMDSRL--YASNISDSLF 414
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLEREN 464
N TL VT+ ++ +G M+ + E G+ VD+++ +A L F YK L +
Sbjct: 415 NTTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLQELAEILRFNYKIRLVGDG 471
Query: 465 TYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 472 VYGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVH 529
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 530 MGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 569
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 670 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 726
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 727 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 771
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 669
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 670 IHGGSSMTFFQ 680
>gi|194913400|ref|XP_001982686.1| GG16408 [Drosophila erecta]
gi|190647902|gb|EDV45205.1| GG16408 [Drosophila erecta]
Length = 909
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 221/441 (50%), Gaps = 40/441 (9%)
Query: 131 MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIK 190
++W IIYE L L A + + IRQ PD+ YR +L+ I+
Sbjct: 4 LNWTKVAIIYEEDYGLFNLMHSSTEA----------KAEMYIRQASPDS--YRQVLRAIR 51
Query: 191 NSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYAN 250
I++D + T + ++ M D++ + + T + T D +DF+ N
Sbjct: 52 QKEIYKIIVDTNPSHIKTFFRSILQLQ-MNDHRYHYMFTT---FDLETYDLEDFRYNSVN 107
Query: 251 ITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ-- 308
IT R+++ + ++N + + G + ++ E+ALM+D+VY FA L
Sbjct: 108 ITAFRLVDVDSKRYLEVINQ-MQKLQHNGLEIINGIPYIQTESALMFDSVYAFATGLHFL 166
Query: 309 SLGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+L R+ L LSC + +W G+ + N + + DG+TG +N GRRN F L+ +
Sbjct: 167 NLDNRQNLYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGNVNF--VEGRRNIFKLDIL 224
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
+ ++ + +G W G+N S D I N TL V ++ + PY
Sbjct: 225 KLKQEKIQKVGYWQPDGGVNISDPTAFYD----SNIANITLVVMTR---------EERPY 271
Query: 428 MMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 482
+M + TG + G+ +DL+K IA ++ F YK L +N YG P+T WNG++ E
Sbjct: 272 VMVKEDKNLTGNIRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQE 331
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
L E+RADLA+ +TI R + +DFT PFM LGI IL++ P + LFSF+ PL+ ++W
Sbjct: 332 LMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIW 391
Query: 543 VYMATAYLGVSLLLFFLARIS 563
+Y+ AY+ VS LF +AR S
Sbjct: 392 LYVLAAYILVSFALFVMARFS 412
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 67/94 (71%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + +VFVK+ +G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 687 RDSKIGIYQKMWRYMENRKTTVFVKTYDDGIKRVME--GSYAFLMESTMLDYAVQRDCNL 744
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 745 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 778
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++ DLA+ I YG +E G
Sbjct: 621 RATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGG 680
Query: 814 STRNFFK 820
ST FF+
Sbjct: 681 STMTFFR 687
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--GY 686
+ +VG G I+ PT+ + + + + + + PY+M + TG + G+
Sbjct: 231 IQKVGYWQPDGGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDKNLTGNIRFEGF 289
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 290 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 335
>gi|402895118|ref|XP_003910681.1| PREDICTED: glutamate receptor 4, partial [Papio anubis]
Length = 819
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 256/525 (48%), Gaps = 58/525 (11%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S G+ AIFG + + + S C I + P+ PT G +
Sbjct: 1 CSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRP 53
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
L +S +++ +W+ F +Y+T LQ ++E A + + ++ +
Sbjct: 54 SLRGALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF-- 106
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWIN 235
+ YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 107 NDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF--- 161
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-K 290
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K
Sbjct: 162 -KDISLERFIHGGANVTGFQLVDFNTPMVIKLMDRW--------KKLDQREYPGSETPPK 212
Query: 291 IEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITID 344
+AL YD V + A +SL +K C NP++ W G+ + +K + I
Sbjct: 213 YTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQ 272
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG + D GRR +++++ E S + +G WN L + V + + IE
Sbjct: 273 GLTGNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIE 330
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKF 458
NRT+ VT+ PY+M KN E E GY VDL IA + YK
Sbjct: 331 NRTVVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKI 381
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI
Sbjct: 382 AIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISI 441
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 442 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 486
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 534 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 593
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 594 TKEFFR 599
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 599 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 658
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 659 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 703
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 343 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 402
Query: 726 IGEL 729
+GEL
Sbjct: 403 VGEL 406
>gi|351703270|gb|EHB06189.1| Glutamate receptor 4, partial [Heterocephalus glaber]
Length = 819
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 256/525 (48%), Gaps = 58/525 (11%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S G+ AIFG + + + S C I + P+ PT G +
Sbjct: 1 CSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLIT----PS---FPTEGESQFVLQLRP 53
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
L +S +++ +W+ F +Y+T LQ ++E A + + ++ +
Sbjct: 54 SLRGALLS-LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHV----SAICVENF-- 106
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWIN 235
+ YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 107 NDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF--- 161
Query: 236 AHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-K 290
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K
Sbjct: 162 -KDISLERFIHGGANVTGFQLVDFNTPIVTKLMDRW--------KKLDQREYPGSETPPK 212
Query: 291 IEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITID 344
+AL YD V + A +SL +K C NP++ W G+ + +K + I
Sbjct: 213 YTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQ 272
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG + D GRR +++++ E S + +G WN L + V + + IE
Sbjct: 273 GLTGNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIE 330
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKF 458
NRT+ VT+ PY+M KN E E GY VDL IA + YK
Sbjct: 331 NRTVVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKI 381
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI
Sbjct: 382 AIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISI 441
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 442 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 486
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 534 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 593
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 594 TKEFFR 599
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 599 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 658
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 659 TMKVGGNLDSKGYGVATPKGSSL 681
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 343 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 402
Query: 726 IGEL 729
+GEL
Sbjct: 403 VGEL 406
>gi|195118146|ref|XP_002003601.1| GI21873 [Drosophila mojavensis]
gi|193914176|gb|EDW13043.1| GI21873 [Drosophila mojavensis]
Length = 940
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 286/599 (47%), Gaps = 78/599 (13%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYD-SLHTAKLMCN 59
+ I F NE E+ F V IN + P+++ ++ D S+ + C+
Sbjct: 25 INIGAFFYDNELELEKEFLAVVNTING--PEAEQTLRFNPLIKRLKPEDGSVILQEYACD 82
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVH--GVNVYPES 117
G+AAIFGP S +I+ + IPH+E F ++ ++ H +N+YP
Sbjct: 83 LIDNGVAAIFGPSSQSASDIVALVANNSGIPHIE-FDVADEEYMEEKPNHQMTLNMYPSL 141
Query: 118 HLISKGISVIINDMDWDTFTIIYETHD--NLVYLQQVLE--NAHDDDKEIRPGRPSVTIR 173
++SK + II++ W FTI+Y+ D LQ +L+ H D +R +
Sbjct: 142 LILSKAYADIIHNFGWRKFTIVYDADDPRASARLQDLLQLREVHSDVVRVRKFQRG---- 197
Query: 174 QLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQN-YILSLTSY 232
DD+R + K IK E ++LDC D V +L + E L G + + ++ +L +Y
Sbjct: 198 ------DDFRVMWKSIK--GERRVVLDCVPDMLVELLNSSSEFGLTGQFNHIFLTNLETY 249
Query: 233 WINAH----TVDFQDFQPGYANITTVRMI-NPTNP-HIRSIMNGWIYEENERGRSLNVRA 286
N H T D + F NIT RM+ NP P H++ + G++ + + N
Sbjct: 250 --NDHLEELTADNETFA---VNITAARMLLNPAPPPHVQ--LYGYVTQRDNIVSENNEPP 302
Query: 287 ETVKIEAALMYDAVYLFAAALQSLG----ERKPLPTPLSCENPSS----WQHGLGIGNLM 338
T+ + L+YD + LF A ++ +R +P ++CE+ ++ WQ G + LM
Sbjct: 303 RTILHD--LLYDGLQLFVQAWRNASYFYPDRMMVPR-MNCESATAGGRAWQMGRYLTRLM 359
Query: 339 KSITIDG----MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQ 394
K + G T + D + G+R +F++E + +D V W+T + T+
Sbjct: 360 KGTSGVGNTNFRTSHLQFD-EDGQRINFNIEIYD-PTDNIGV-AVWDTRGQI----TLLD 412
Query: 395 MDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL--------YGYSVDLIK 446
++ + ++KI R T R+ G PY +N EL GY+VDLI
Sbjct: 413 VEMKVQKKIVYRVAT---------RI---GPPYFSRNETAMELNLTGNAIYQGYAVDLID 460
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA E+ F Y FV + YG + T +WNG+IGE+ A + ICDLTIT RR AVD
Sbjct: 461 AIAKEVGFEYVFVPVADQQYGKQDKDTKQWNGIIGEIINNDAHMGICDLTITQARRTAVD 520
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSG 565
FT+PFM LG+SIL K K+ L +FLEP VWV++ + +S L +ARI+
Sbjct: 521 FTVPFMQLGVSILAYKSPPKEKKLHAFLEPFGGSVWVWILISVFAMSFLKVIIARIAKA 579
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN ++Y+ + M + PS + K N EGVERV+ G Y F ME+T +EY E++CDL
Sbjct: 689 SNETVYRLAFNLMNNDDPSAYTKDNDEGVERVLTSMGDYMFLMETTTLEYNREQHCDLRS 748
Query: 635 VGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A LR+ QGE Y +K
Sbjct: 749 VGEKFGEKHYAIAVP---FGAEYRSNLSVAILRLSEQGELYNLK 789
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL WW F +I+ +SYTANLAAFLT+++M I +++ L+ +K+G + GST N
Sbjct: 626 RLFEATWWIFAIIIANSYTANLAAFLTSSKMEGSITDLKSLSSQKAVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY +N EL GY+VDLI IA E+ F Y FV + YG + T +
Sbjct: 430 GPPYFSRNETAMELNLTGNAIYQGYAVDLIDAIAKEVGFEYVFVPVADQQYGKQDKDTKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|195437480|ref|XP_002066668.1| GK24445 [Drosophila willistoni]
gi|194162753|gb|EDW77654.1| GK24445 [Drosophila willistoni]
Length = 945
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 174/591 (29%), Positives = 279/591 (47%), Gaps = 64/591 (10%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYD-SLHTAKLMCN 59
+ I F +E E+ F V +N + L P+++ ++ D S+ + C+
Sbjct: 26 INIGAFFYDDEMELEKEFMAVVNSLNG--LEMDQTFTLNPLIKRLKPEDNSVSMQEQACD 83
Query: 60 ATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHGVNVYPESH 118
G+AAIFGP S +I+ +C IPH+E D N +N+YP
Sbjct: 84 LIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIEFDVSDEEHVEEKPNHEMTINLYPSQV 143
Query: 119 LISKGISVIINDMDWDTFTIIYETHD--NLVYLQQVLE--NAHDDDKEIRPGRPSVTIRQ 174
++SK + I+ + W FTI+Y+ D LQ +L+ H+D V +R+
Sbjct: 144 ILSKAYADIVQNYGWRKFTIVYDADDVKAQARLQDLLQLREVHND---------VVRVRK 194
Query: 175 LPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYW 233
DDYR + K I+ E ++LDC+ D V +L + E L G + + L+ L +Y
Sbjct: 195 FSRG-DDYRVMWKSIR--GERRVVLDCAPDMVVELLNSSTEFGLTGQFNHIFLTNLDTYT 251
Query: 234 INAHTVDFQDFQPGYANITTVRMI--NPTNPHIRSIMNGWIYEENERGRSLNVRAETVKI 291
N + D + NIT R++ + P I +N N T+
Sbjct: 252 DNLEELS-ADNETFAVNITAARLLLTTESQPMYLQKYGSVIQRDNIVSEENNEPFRTLLH 310
Query: 292 EAALMYDAVYLFAAALQSLG----ERKPLPTPLSCENPSS----WQHGLGIGNLMKSIT- 342
+ L+ D V LF+ A ++ +R +P ++CE +S WQ G + LMK +
Sbjct: 311 D--LLADGVQLFSYAWRNASYFYPDRMQVPR-MNCEFAASGGRPWQMGRYLMRLMKGTSG 367
Query: 343 IDGMTGRI-NLD-SQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKK 400
++ T R N+ + G+R +F++E + + + W+T +N +D + +
Sbjct: 368 VNSATFRTSNMQFDEDGQRINFNIEIYDPLDG--IGIAIWDTKGQINQL----NVDTKVQ 421
Query: 401 EKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL--------YGYSVDLIKMIANEL 452
+KI R T R+ G PY +N EL GY+VDLI+ IA E+
Sbjct: 422 KKIVYRVAT---------RI---GPPYFTENTTAIELNMTGNAIYMGYAVDLIEAIAKEV 469
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
NF Y FV + YG + T +WNG+IGE+ A + ICDLTIT RR AVDFT+PFM
Sbjct: 470 NFEYVFVPVADQQYGKQDKDTKQWNGIIGEIINNDAHMGICDLTITQARRTAVDFTVPFM 529
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
LG+SIL K K+ ++++LEP +VW+++ + +S L +ARI+
Sbjct: 530 QLGVSILAYKSPHKEKSVYAYLEPFGGEVWIWILISVFVMSFLKVIIARIA 580
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN ++Y+ + M+ + K N EGVERV K +G Y F ME+T +EY +++CDL
Sbjct: 691 DSNETVYRLAFNLMKQDDNYPYTKGNPEGVERVRKNRGDYMFLMETTTLEYYEQQHCDLR 750
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A LR+ +GE Y MK
Sbjct: 751 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILRLSERGELYKMK 792
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLTN+ M I +++DL+ IK+G + GST N
Sbjct: 629 RMFEATWWIFAIIIANSYTANLAAFLTNSNMKGSIGSLKDLSGQKAIKFGTILGGSTYNL 688
Query: 819 F 819
Sbjct: 689 L 689
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY +N EL GY+VDLI+ IA E+NF Y FV + YG + T +
Sbjct: 433 GPPYFTENTTAIELNMTGNAIYMGYAVDLIEAIAKEVNFEYVFVPVADQQYGKQDKDTKQ 492
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 493 WNGIIGEI 500
>gi|195033014|ref|XP_001988604.1| GH11254 [Drosophila grimshawi]
gi|193904604|gb|EDW03471.1| GH11254 [Drosophila grimshawi]
Length = 940
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 284/603 (47%), Gaps = 90/603 (14%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPD--IILEPIVQHVENYD-SLHTAKLM 57
+ I +F NE E+ F + IN PD + P+++ ++ D S+ +
Sbjct: 25 ISIGALFYDNELELEKEFMSVINSIN----GPQPDQGSFIYPLIKRLKPEDGSVILQEHA 80
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE-AFWDPNKYFIPTNGVHGVNVYPE 116
C+ G+AAIFGP S +I+ +C IPH+E D N +N+YP
Sbjct: 81 CDLIDNGVAAIFGPSSQAASDIVALVCNSTGIPHIEFDMSDEEHMEEKPNHQMSLNLYPS 140
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLV--YLQQVLE--NAHDDDKEIRPGRPSVTI 172
++SK + I+ + W FTI+Y+ D LQ +L+ + H+D V +
Sbjct: 141 QLMLSKAYADIVQNYGWRKFTIVYDADDAKANARLQDLLQLCDMHND---------VVRV 191
Query: 173 RQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTS 231
R+ D DDYR + K I+ E ++LDC+ D V +L + E L G + + L+ L +
Sbjct: 192 RKYTKD-DDYRVMWKSIR--GERRVVLDCAPDMLVELLNSSSEFGLTGQFNHIFLTNLET 248
Query: 232 Y--WINAHTVDFQDFQPGYANITTVR-MINPTNP-HIR-----SIMNGWIYEENERGRSL 282
Y + T D + F NIT R ++ P P H+R S + +YE NE R+L
Sbjct: 249 YSDHLEELTADNETFA---VNITAARILLTPEPPAHLRLYGYVSQRDSVVYENNEPVRTL 305
Query: 283 NVRAETVKIEAALMYDAVYLFAAALQSLG----ERKPLPTPLSCENPSS----WQHGLGI 334
L+ D V LF + ++ +R +P ++C+ +S W G +
Sbjct: 306 ---------LHDLINDGVQLFVQSWRNASYFYPDRMAVPR-MNCDLATSGGRPWPMGRFL 355
Query: 335 GNLMKSIT----IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSR 390
LMK + + T + D + G+R +F++E + + + W+T
Sbjct: 356 TRLMKGTSGVNSTNFRTSNLQFD-EDGQRINFNIEIYDPTDN--IGIAVWDT------RG 406
Query: 391 TVEQMDKEKK--EKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL--------YGY 440
+ Q+D E K +K+ R T R+ G PY +N EL GY
Sbjct: 407 QITQLDMEMKVQKKVVYRVAT---------RI---GPPYFSRNETAMELNLTGNAIYQGY 454
Query: 441 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSE 500
+VDLI IA E+ F Y F+ + YG + T +WNG+IGE+ A + ICDLTIT
Sbjct: 455 AVDLIDAIAQEVGFEYIFLPVADQQYGKQDKDTKQWNGIIGEIINNDAHMGICDLTITQA 514
Query: 501 RRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLA 560
RR AVDFT+PFM LG+SIL K K+ +L ++L+P +VW+++ + +S L +A
Sbjct: 515 RRTAVDFTVPFMQLGVSILAYKSPHKEKELHAYLKPFGGEVWIWILISVFAMSFLKVIIA 574
Query: 561 RIS 563
RI+
Sbjct: 575 RIA 577
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN ++Y+ + M PS + K N EGVERV+ G Y F ME+T +EY E++CDL
Sbjct: 689 SNETVYRLAFNLMNQDDPSAYTKDNDEGVERVLASCGDYMFLMETTTLEYNREQHCDLRA 748
Query: 635 VGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A LR+ +GE Y +K
Sbjct: 749 VGEKFGEKHYAIAVP---FGAEYRSNLSVAILRLSERGELYNLK 789
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL WW F +I+ +SYTANLAAFLT+++M I N++DL+ +K+G + GST N
Sbjct: 626 RLFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIGNLKDLSAQKDVKFGTILGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY +N EL GY+VDLI IA E+ F Y F+ + YG + T +
Sbjct: 430 GPPYFSRNETAMELNLTGNAIYQGYAVDLIDAIAQEVGFEYIFLPVADQQYGKQDKDTKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|431898757|gb|ELK07132.1| Glutamate receptor 3 [Pteropus alecto]
Length = 837
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 263/537 (48%), Gaps = 73/537 (13%)
Query: 52 HTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW--DPNKYFIPTNGVH 109
+T ++C+ S G+ AIFG + N + S C V + D + F+
Sbjct: 32 NTISIVCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFV------ 85
Query: 110 GVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPS 169
+ + P + I ++ W+ F +Y+T LQ ++E A ++ ++ R
Sbjct: 86 -IQMRPA---LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQV-TARSV 140
Query: 170 VTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYI 226
I+ D ++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+
Sbjct: 141 GNIK----DVQEFRRIIEEMDRRQEKRFLIDCEVERINTILEQ---VVILGKHSRGYHYM 193
Query: 227 LSLTSYWINAHTVDFQDFQPGYANITTVRMINPTN-----PHIRSIMNGWIYEENERGRS 281
L+ + + + G ANIT +++N + P I+S +
Sbjct: 194 LANLGF----TDILLERVMHGGANITGFQIVNNEHYDNLIPCIKSFLV----------EH 239
Query: 282 LNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIG 335
+NV ++ K +AL +DA+ + A A + L ++ + C NP+ W G+ I
Sbjct: 240 INV-SKKEKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIE 298
Query: 336 NLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQM 395
+K + + GMTG I D+ GRR +++++ E + G WN + R V
Sbjct: 299 RALKMVQVQGMTGNIQFDTY-GRRTNYTIDVYEMKVTGSRKAGYWN-----EYERFVPFS 352
Query: 396 DKE---KKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIK 446
D++ ENRT+ VT+ PY+M KN E E Y GY VDL
Sbjct: 353 DQQISNDSASSENRTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAY 403
Query: 447 MIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVD 506
IA + YK + + YG +P+T WNG++GEL RAD+A+ LTIT R +D
Sbjct: 404 EIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVID 463
Query: 507 FTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
F+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 464 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 520
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 570 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 629
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 630 TKEFFR 635
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 635 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 694
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 695 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 739
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 377 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 436
Query: 726 IGEL 729
+GEL
Sbjct: 437 VGEL 440
>gi|270004235|gb|EFA00683.1| hypothetical protein TcasGA2_TC003560 [Tribolium castaneum]
Length = 1186
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 41/492 (8%)
Query: 3 IVGIFGPNEEEVAT--AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ IF ++ + AT AF+ AV +INKD K L P L +Q+V DS H +K CN
Sbjct: 117 VWAIFTEDQRDSATELAFKYAVYKINKD-KTLLPYTSLVYDIQYVPRDDSFHASKKACNQ 175
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
G+ A+FGP I S+C DIPH+EA D + +N++P HL+
Sbjct: 176 VQHGVHAVFGPSDPLLGAHIHSICDALDIPHLEARLDLDTDIRE----FSINLHPAQHLL 231
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ ++ ++W IIYE L+ L++++ + H+ D EI +RQ P++
Sbjct: 232 NTAFQDVMAFLNWTKVAIIYEEDYGLIKLRELVRSPHNGDLEIH-------LRQADPES- 283
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR +LKEIK+ +I++D LK ++ M DY+ + L T + T D
Sbjct: 284 -YRAVLKEIKSKEIHNIVIDTKPSNMQHFLKGILQLQ-MNDYKYHYLFTT---FDMETFD 338
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
+DF+ + N+T R+++ T+ ++ ++ + + + ++ EAAL+YD+V
Sbjct: 339 LEDFKYNFVNMTAFRVVDVTDLSVQEVLRDMARFQANINADSKLNSTYLQAEAALIYDSV 398
Query: 301 YLFAAALQSLGERKPLP-TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRR 359
++FA LQ+L + L + +SC+ W GL + N + ++ G++G I + GRR
Sbjct: 399 FVFAIGLQTLEQSHTLKLSNVSCDKEQPWLEGLSLINYINAVEFKGLSGPIEF--KEGRR 456
Query: 360 NSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLR 419
F L+ ++ +G W G+N + D N TL VT T ++
Sbjct: 457 IQFKLDLLKLKQHALVKVGEWRPGAGVNITDRAAFFDPGTM----NVTLVVT--TILEM- 509
Query: 420 VLFQGEPYMMKNPE---TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
PY+M +PE TG YG+ VD+++ I+ E+ F Y L + YG + +TG
Sbjct: 510 ------PYVMLHPEKNYTGNSRFYGFCVDVLESISKEVGFDYLLDLVPDRKYGARDAKTG 563
Query: 475 KWNGLIGELQEQ 486
+WNG++ EL +
Sbjct: 564 QWNGMVRELMQH 575
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 201/411 (48%), Gaps = 72/411 (17%)
Query: 418 LRVLFQGE-PYMMKNPETG----ELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
+R L Q E PY+M +T E Y G+ +DL+K IA+ + F Y+ L ++ YG ++
Sbjct: 569 VRELMQHEQPYVMLRTQTNVVGNERYEGFCIDLLKEIASMVGFEYRIELVPDSKYGVIDL 628
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+TG+WNG++ +L +++ADLA+ +TI R + +DFT PFM LGISIL++ P K+ F
Sbjct: 629 ETGEWNGIVRQLMDKKADLAVGSMTINYARESVIDFTKPFMNLGISILFKVPTDKESAFF 688
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMHSAMESSR 591
SF PL FD+W+++ A FF++ + + R++
Sbjct: 689 SFFSPLGFDIWIFVGGA--------FFMSSFTLFTLARFTP------------------- 721
Query: 592 PSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGI--AMP 649
E V + K + ++ + ++ + + G L + G+ +P
Sbjct: 722 -----------YEWVYPQPWKRSKYLVN-----QLSMSNSFWFIAGTLLRQPSGVNPQVP 765
Query: 650 TSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERE 709
TS+ FSF NP +++ Y +++ + FV+ R
Sbjct: 766 TSQQARLFSF----------------MNPLAMDIWMYVFSAYVLVSITM-----FVVARF 804
Query: 710 NTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFT 769
+ Y NP + E Q + F I +++ +A STR+V G+WWFFT
Sbjct: 805 SPYEWHNPHPCDMENELVENQFSLANSFWFTIGTLMQQGSDLNPKATSTRIVGGIWWFFT 864
Query: 770 LIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
LI+ISSYTANLAAFLT RM PI+N EDLA I YG +E GST FF+
Sbjct: 865 LIIISSYTANLAAFLTVERMITPIENAEDLAGQTEIPYGTLESGSTMTFFR 915
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
+ SGS + + ++S + Y++M ME+ +PSVFV + +EG++RV++ G YAF MEST
Sbjct: 905 LESGSTMTF-FRDSMIETYKKMWRFMENRKPSVFVPTYEEGIQRVLE--GNYAFLMESTM 961
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++Y V+++C+L Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 962 LDYTVQRDCNLTQIGGLLDSKGYGIATPMGSPWRDKISLAILELQ 1006
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 672 PYMMKNPE---TG--ELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M +PE TG YG+ VD+++ I+ E+ F Y L + YG + +TG+WNG++
Sbjct: 510 PYVMLHPEKNYTGNSRFYGFCVDVLESISKEVGFDYLLDLVPDRKYGARDAKTGQWNGMV 569
Query: 727 GELQEQVDTFILF 739
EL + +++
Sbjct: 570 RELMQHEQPYVML 582
>gi|426229960|ref|XP_004009051.1| PREDICTED: glutamate receptor 1 isoform 4 [Ovis aries]
Length = 826
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|338713117|ref|XP_003362830.1| PREDICTED: glutamate receptor 1 [Equus caballus]
Length = 826
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|384381484|ref|NP_001244948.1| glutamate receptor 1 isoform 3 precursor [Homo sapiens]
gi|397517665|ref|XP_003829028.1| PREDICTED: glutamate receptor 1 isoform 6 [Pan paniscus]
gi|410039922|ref|XP_003950711.1| PREDICTED: glutamate receptor 1 [Pan troglodytes]
gi|221041030|dbj|BAH12192.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|345799498|ref|XP_003434571.1| PREDICTED: glutamate receptor 1 [Canis lupus familiaris]
gi|410949417|ref|XP_003981418.1| PREDICTED: glutamate receptor 1 isoform 5 [Felis catus]
Length = 826
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|390459459|ref|XP_003732315.1| PREDICTED: glutamate receptor 1 [Callithrix jacchus]
Length = 826
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|441596058|ref|XP_004087286.1| PREDICTED: glutamate receptor 1 [Nomascus leucogenys]
Length = 826
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|47221422|emb|CAF97340.1| unnamed protein product [Tetraodon nigroviridis]
Length = 622
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 274/564 (48%), Gaps = 79/564 (14%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ A+ G N++ S C + F P+ + + TN + + P+
Sbjct: 1 CSQFSKGVYALMGLYDRRTVNMLMSFCGSLHV----CFITPS-FPVQTNNQFVLQLRPQ- 54
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + + +++ W F +Y + L LQ++L+ A + + ++ SV + L
Sbjct: 55 --LQEPLMALLDHFYWTRFVYMYSSDSGLTVLQKILDTAAERNWQV----TSVNLDSLTE 108
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQ-AKEVHLMGDYQNYILSLTSYWINA 236
T + LL ++ E I++DC +++ +I+ A + + +Y +YIL+ + ++
Sbjct: 109 AT--FIKLLTDLDYKKEFQIIVDCELERLNSIINLIAAQRRNLKNY-HYILANLGF-MDL 164
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE----RGRSLNVRAE----- 287
+ +FQ +P N+T +++N +NP + I W+ +N+ R L V A
Sbjct: 165 NLTEFQKLKP---NVTGFQLVNWSNPTMEKINQDWLDFDNKDLKLARRRLRVGAPGSPGT 221
Query: 288 -------------------TVKIEAALMYDAVYLFAAALQSLGE------RKPLPTPLSC 322
+ AL +D V + AAA +L + R+
Sbjct: 222 SRNFKVIRSNKNGTLFWFCAFQYTGALTFDGVSVMAAAFHNLRQQRIDISRRGNAGECLA 281
Query: 323 ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNT 382
P+ W G+ I ++ + +DG+TGR+ D + G R ++++ +E + +G WN
Sbjct: 282 NPPAPWGQGIDIQRALQQVRLDGLTGRVQFDER-GHRTNYTVTVMELSLRGPRKIGYWNE 340
Query: 383 AFGLNHSRTVEQMDKEKKEKIENRTLTVT----------------SKTFAKLRVLF-QGE 425
G ++ + + E+ + I+N+T +T ++T A +L Q
Sbjct: 341 RRGYVNT-AIYRPSMEEFQSIQNKTYIITTILVRLGRAPASFCVEAETAATCDLLRPQEA 399
Query: 426 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 479
PYMM KN E E GY +L IA + F+YK L + YG + +T WNG+
Sbjct: 400 PYMMLKKNHEQFEGNDRYEGYCAELASEIAKHVGFSYKLELVGDGKYGARDAETKMWNGM 459
Query: 480 IGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
+GEL +AD+A+ LTIT R +DFT PFM+LGISI+ +KP K +P +FSFL+PL++
Sbjct: 460 VGELVYGKADVAVAPLTITLVREQVIDFTKPFMSLGISIMIKKPTKSKPGVFSFLDPLAY 519
Query: 540 DVWVYMATAYLGVSLLLFFLARIS 563
++W+ + AY+GVS++LF ++R S
Sbjct: 520 EIWMCIVFAYIGVSVVLFLVSRFS 543
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 669 QGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 722
Q PYMM KN E E GY +L IA + F+YK L + YG + +T W
Sbjct: 397 QEAPYMMLKKNHEQFEGNDRYEGYCAELASEIAKHVGFSYKLELVGDGKYGARDAETKMW 456
Query: 723 NGLIGEL 729
NG++GEL
Sbjct: 457 NGMVGEL 463
>gi|403285587|ref|XP_003934102.1| PREDICTED: glutamate receptor 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 826
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A QSL
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|157509|gb|AAA28574.1| glutamate receptor subunit [Drosophila melanogaster]
Length = 906
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 178/592 (30%), Positives = 286/592 (48%), Gaps = 81/592 (13%)
Query: 5 GIFGPNEEEVATAFEIAVRRINK-DFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSE 63
IF NE+E+ +F+ A R +N F L I +++ DS ++ C S
Sbjct: 36 AIFYENEKEIELSFDQAFREVNNMKFSELR----FVTIKRYMPTNDSFLLQQITCELISN 91
Query: 64 GIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI---PTNGVHGVNVYPESHLI 120
G+AAIFGP S +I+ + IPH+E +D N +NV P ++
Sbjct: 92 GVAAIFGPSSKAASDIVAQIANATGIPHIE--YDLKLEATRQEQLNHQMSINVAPSLSVL 149
Query: 121 SKG-ISVIINDMDWDTFTIIYETHDNLVYLQQVLE-NAHDDDKEIRPGRPSVTIRQLPPD 178
S+ +I ++ +W TFT+IYET + L LQ ++ A + D V +R L
Sbjct: 150 SRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSD--------YVKLRNLADY 201
Query: 179 TDDYRPLLKEIKNS-SESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILS-LTSYWINA 236
DDYR L KE + E I+LDC +LK + + L G ++N+ L+ L ++
Sbjct: 202 ADDYRILWKETDETFHEQRIILDCEPKTLKELLKVSIDFKLQGPFRNWFLTHLDTHNSGL 261
Query: 237 HTVDFQDFQPGYANITTVRM-INPTNPHIRSIMNGWIYEENERGRSLNVRAETV----KI 291
+ +DF+ ANIT+VR+ + NP ER ++ + + + +
Sbjct: 262 RDIYNEDFK---ANITSVRLKVVDANPF-------------ERKKTRLTKVDQILGNQTM 305
Query: 292 EAALMYDAVYLFAAALQS-LGERKPLPTP-LSCENPSSWQHGLGIGNLMKSITIDGM--- 346
L+YDAV LFA++ ++ + +P P C + S W G I N MK+I+ D +
Sbjct: 306 LPILIYDAVVLFASSARNVIRAMQPFHPPNRHCGSSSPWMLGAFIVNEMKTISEDDVEPH 365
Query: 347 --TGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
T + LD + G+R F+LE + +N V D K+++
Sbjct: 366 FKTENMKLD-EYGQRIHFNLEIYKPT---------------VNEPMMVWTPDNGIKKRLL 409
Query: 405 NRTLTV--TSKTFAKLRVLFQ-----GEPYMM-----KNPETGELY-GYSVDLIKMIANE 451
N L T++ F++ R ++ EPY M +N E Y GY+ + +
Sbjct: 410 NLELESAGTTQDFSEQRKVYTVVTHYEEPYFMMKEDHENFRGREKYEGYAWISLASFPSS 469
Query: 452 LNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPF 511
+ +F++ N G NP+T +W+G+I +L + A + +CDLTIT RR+ VDFT+PF
Sbjct: 470 WSSITEFMIVNGN--GKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPF 527
Query: 512 MTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
M LGISIL+ K + + F+FLEP + +VW+YM A L ++L F+AR+S
Sbjct: 528 MQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLS 579
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN + YQR + M+ PS F +NKEGV RV KEKG YAF ME+T + Y +E+NCDL Q
Sbjct: 690 SNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQ 749
Query: 635 VGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMKN 677
+G + K YG+A+P S + S +L +GE MKN
Sbjct: 750 IGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSE--RGELQKMKN 791
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R++ MWWFF L+M+S+YTANL AFLT+ + IK+ +DL + ++ +G + GST F
Sbjct: 628 RILTSMWWFFALMMLSTYTANL-AFLTSNKWQSSIKSPQDLIEQDKVHFGSMRGGSTSLF 686
Query: 819 F 819
F
Sbjct: 687 F 687
>gi|426350716|ref|XP_004042914.1| PREDICTED: glutamate receptor 1 isoform 4 [Gorilla gorilla gorilla]
Length = 826
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 227/442 (51%), Gaps = 38/442 (8%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGER 313
+++N T+ IM W + ++ V + K +AL YD V + A A QSL +
Sbjct: 173 FQLVNYTDTIPAKIMQQW--KSSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ 230
Query: 314 K----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ C NP+ W G+ I ++ + +G+TG + + + GRR +++L +
Sbjct: 231 RIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHVI 289
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
E D + +G WN + T Q + ++NRT VT+ +PY
Sbjct: 290 EMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDPY 339
Query: 428 MM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIG 481
+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++G
Sbjct: 340 VMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVG 399
Query: 482 ELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDV 541
EL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++
Sbjct: 400 ELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEI 459
Query: 542 WVYMATAYLGVSLLLFFLARIS 563
W+ + AY+GVS++LF ++R S
Sbjct: 460 WMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|355760685|gb|EHH61705.1| hypothetical protein EGM_19752 [Macaca fascicularis]
Length = 830
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 240/471 (50%), Gaps = 30/471 (6%)
Query: 104 PTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEI 163
PT+G H + L +S +I WD F +Y++ L LQ VL++A + ++
Sbjct: 20 PTDGTHPFVIQMRPDLKGALLS-LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV 78
Query: 164 RPGRPSVTIRQLPPDTDD--YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLM 219
++ + + D D YR L ++++ E ++LDC DK I+ Q + H+
Sbjct: 79 ----TAINVGNINNDKKDEMYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVK 134
Query: 220 GDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGW-IYEENER 278
G +YI++ + D Q G AN++ ++++ + + + W EE E
Sbjct: 135 G--YHYIIANLGF----TDGDLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY 188
Query: 279 GRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGL 332
T+K +AL YDAV + A ++L +++ C NP+ W G+
Sbjct: 189 P---GAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGV 245
Query: 333 GIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTV 392
I +K + ++G++G I D Q G+R ++++ +E ++ + +G W+ + + T
Sbjct: 246 EIERALKQVQVEGLSGNIKFD-QNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLT- 303
Query: 393 EQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANEL 452
E +EN+T+ VT+ V+ + M++ E E GY VDL IA
Sbjct: 304 ELPSGNDTSGLENKTVVVTT-ILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHC 360
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
F YK + + YG + T WNG++GEL +AD+AI LTIT R +DF+ PFM
Sbjct: 361 GFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFM 420
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+LGISI+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 421 SLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 471
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++ +M + M S+ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 583 RRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCD 642
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + + A L++ QG +KN
Sbjct: 643 TMKVGGNLDSKGYGIATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 687
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 768 FTL--IMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
FTL + + + + +AFLT RM PI++ EDL+K I YG ++ GST+ FF+
Sbjct: 529 FTLKKLPAADFLSKWSAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFR 583
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA F YK + + YG + T WNG+
Sbjct: 328 PYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGM 387
Query: 726 IGEL 729
+GEL
Sbjct: 388 VGEL 391
>gi|432106654|gb|ELK32310.1| Glutamate receptor, ionotropic kainate 5 [Myotis davidii]
Length = 569
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 224/432 (51%), Gaps = 45/432 (10%)
Query: 167 RPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYI 226
+ ++++R L D+ D PLLKEI++ S I++D + + IL++A E+ ++ + YI
Sbjct: 42 KETLSVRMLD-DSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMISAFYKYI 100
Query: 227 LSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSL 282
L+ + I + +NI M N ++P +RS+ W EN +
Sbjct: 101 LTTMDFPI----LHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSW--RENCEASTY 154
Query: 283 NVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSI 341
A + AALM+DAV++ +A++ L + + PL+C + + W HG + N ++ +
Sbjct: 155 PGPA----LSAALMFDAVHVVVSAVRELTRSQEIGVKPLACTSANIWPHGTSLMNYLRMV 210
Query: 342 TIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEK 399
DG+TGR+ +S+ G+R +++L +E + +G W N +N + +D
Sbjct: 211 EYDGLTGRVEFNSK-GQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNAT----TLDINL 265
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELN 453
+ + N+TL VT+ PY+M+ P L G + VD+++ +A L
Sbjct: 266 SQTLANKTLVVTT---------ILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLR 316
Query: 454 FTYKFVLERENTYGTLNPQTGKWNGLIGEL-QEQRADLAICDLTITSERRAAVDFTMPFM 512
F Y+ L + YG P G W G++GEL Q+ADLA+ TIT+ER +DF+ PFM
Sbjct: 317 FRYRLRLVEDGLYGAPEPN-GSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFM 375
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSA 572
TLGISILYR ++P FSFL+P S VW++M AYL VS +LF AR+S Y
Sbjct: 376 TLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCILFLAARLSP-----YEW 430
Query: 573 KNSNVSLYQRMH 584
N + L R H
Sbjct: 431 YNPHPCLRARPH 442
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 471 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 530
Query: 814 STRNFFKV 821
ST FF+V
Sbjct: 531 STMTFFQV 538
>gi|29823896|emb|CAD58975.1| glutamate receptor [Doryteuthis opalescens]
Length = 888
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 158/598 (26%), Positives = 282/598 (47%), Gaps = 76/598 (12%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I +F E++ TAF AV R N + + L P+ + +++ DS +C+
Sbjct: 37 ISIGSVFDVESEKIQTAFRFAVDRFNTIENS--AQLKLNPLREEIDDTDSFSLGNALCSI 94
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW-----DPNKYFIPTNGVHGVNVYP 115
S+G+ A+FG + ++S F IP++ D + Y + + +N+
Sbjct: 95 MSKGVFAVFGKANSSMLATVKSYSDTFQIPYLTTSMAMNTTDQSPYML---FLRPINI-- 149
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
+ I +I + W IY +++ L+ +QQ+ + D ++ ++ +++
Sbjct: 150 ------RAIVDLIEHLGWRVVHYIYISNEGLMRVQQLFQVMGKSDLQM-----TLNVKR- 197
Query: 176 PPDTDDYRPLLKEIKNSS---ESHILLDCSM---DKTVTILKQAKEVHLMGDYQNYILSL 229
D + +LKE+ +++ + H +LD S+ + + +L + VH N
Sbjct: 198 ASDVNSSYVILKELHHTNPELDIHAVLDMSIPMASELMNLLSEDPRVH------NRRFHF 251
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
+DF N++ ++++ N +R ++ W + V+ T+
Sbjct: 252 LLVEPGIQELDFAKIGLYGYNVSGFQLVDFNNMTVRLFLSDWTKIDPAEWPGAGVK--TI 309
Query: 290 KIEAALMYDAVYLFAAALQSLGE-----------RKPLPTPLSC--ENPSSWQHGLGIGN 336
EAAL DAV LF A+++L R + +C E + W G +
Sbjct: 310 TYEAALAVDAVSLFTRAMKNLSNLGLFESLFVRARSGANSSKTCAAERLNVWNKGKHVLK 369
Query: 337 LMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNH-SRTVEQ 394
MK DG+TGR+ D + G R F+L+ ++ + V +G W GL R V
Sbjct: 370 AMKETEFDGLTGRVAFDDR-GHRKEFTLDVLDIGITRGAVKIGYWTPRDGLTMLKRMVRP 428
Query: 395 MDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE---------TGELYGYSVDLI 445
++ E NRT VT+ Q PY+MK P+ + GY VDL
Sbjct: 429 INAPSSE---NRTRIVTT---------IQTPPYIMKKPKPIDGHPLIGNDKYEGYCVDLA 476
Query: 446 KMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAV 505
+ +A+E+ F Y F + ++ YG+ WNG++GEL AD+AI LTI++ R +
Sbjct: 477 RKVAHEVGFDYVFQMVKDGAYGS-KLANDSWNGMVGELIRLEADMAIAPLTISAVRERVI 535
Query: 506 DFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
DF+ PFM+LGISI+ +KPA ++ +FSFL+PLS+++W+ + A++GVS++LF ++R S
Sbjct: 536 DFSKPFMSLGISIMIKKPADQKAHVFSFLDPLSYEIWMCILFAFIGVSVVLFLVSRFS 593
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F ++S R+V +WWFFTLI+ISSYTANLAAFLT RM+ PI++ EDLAK I+YG +
Sbjct: 629 FSPRSISGRIVGSVWWFFTLIIISSYTANLAAFLTVERMSTPIESAEDLAKQTEIEYGTL 688
Query: 811 EMGSTRNFFK 820
G+T FFK
Sbjct: 689 RSGTTEAFFK 698
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEK-NCD 631
K S V++Y+RM + M S PSVF ++G+ RV GKYAF +ES+ +Y + CD
Sbjct: 698 KTSKVAVYERMWAYMTSKTPSVFTDKIQDGITRVRDSNGKYAFLVESSTNDYINNRLPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA-KFSFGFAKLR 665
M+VG LDSKG+GIA P L K + KLR
Sbjct: 758 TMKVGSNLDSKGFGIATPAGSDLGDKLTLAVLKLR 792
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 669 QGEPYMMKNPE---------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 719
Q PY+MK P+ + GY VDL + +A+E+ F Y F + ++ YG+
Sbjct: 445 QTPPYIMKKPKPIDGHPLIGNDKYEGYCVDLARKVAHEVGFDYVFQMVKDGAYGS-KLAN 503
Query: 720 GKWNGLIGEL 729
WNG++GEL
Sbjct: 504 DSWNGMVGEL 513
>gi|54650660|gb|AAV36909.1| RE13419p [Drosophila melanogaster]
Length = 744
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 221/441 (50%), Gaps = 40/441 (9%)
Query: 131 MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIK 190
++W IIYE L L H + + + IRQ PD+ YR +L+ I+
Sbjct: 4 LNWTKVAIIYEEDYGLFNLM------HSSTET----KAEMYIRQASPDS--YRQVLRAIR 51
Query: 191 NSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYAN 250
I++D + + + ++ M D++ + + T + T D +DF+ N
Sbjct: 52 QKEIYKIIVDTNPSHIKSFFRSILQLQ-MNDHRYHYMFTT---FDLETYDLEDFRYNSVN 107
Query: 251 ITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSL 310
IT R+++ + ++N ++ ++N + ++ E+ALM+D+VY FA L L
Sbjct: 108 ITAFRLVDVDSKRYLEVINQMQKLQHNGLDTIN-GSPYIQTESALMFDSVYAFANGLHFL 166
Query: 311 G---ERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
+ LSC + +W G+ + N + + DG+TG + GRRN F L+ +
Sbjct: 167 NLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQF--VEGRRNIFKLDIL 224
Query: 368 EYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPY 427
+ ++ + +G W+ G+N S D I N TL V ++ + PY
Sbjct: 225 KLKQEKIQKVGYWHPDDGVNISDPTAFYD----SNIANITLVVMTR---------EERPY 271
Query: 428 MMKNPE---TGELY--GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGE 482
+M + TG L G+ +DL+K IA ++ F YK L +N YG P+T WNG++ E
Sbjct: 272 VMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQE 331
Query: 483 LQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVW 542
L E+RADLA+ +TI R + +DFT PFM LGI IL++ P + LFSF+ PL+ ++W
Sbjct: 332 LMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIW 391
Query: 543 VYMATAYLGVSLLLFFLARIS 563
+Y+ AY+ VS LF +AR S
Sbjct: 392 LYVLAAYILVSFALFVMARFS 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 68/94 (72%), Gaps = 3/94 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S + +YQ+M ME+ + +VFVK+ ++G++RV++ G YAF MEST ++Y V+++C+L
Sbjct: 522 RDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVME--GSYAFLMESTMLDYAVQRDCNL 579
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 580 TQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 613
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 677 NPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQVDTF 736
NP E++ Y + +++ L FV+ R + Y NP I E Q +
Sbjct: 384 NPLAIEIWLYVLAAYILVSFAL-----FVMARFSPYEWKNPHPCYKETDIVENQFSISNS 438
Query: 737 ILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F + L +A STR+V G W+FF LI+ISSYTANLAAFLT RM PI++
Sbjct: 439 FWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESA 498
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
DLA+ I YG +E GST FF+
Sbjct: 499 SDLAEQTEISYGTLEGGSTMTFFR 522
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPE---TGELY--GY 686
+ +VG G I+ PT+ + + + + + + PY+M + TG L G+
Sbjct: 231 IQKVGYWHPDDGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDKNLTGNLRFEGF 289
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 290 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 335
>gi|359067707|ref|XP_003586381.1| PREDICTED: glutamate receptor 1 [Bos taurus]
Length = 826
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 227/443 (51%), Gaps = 40/443 (9%)
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
D+F + Y L LQ+VL+ A + + ++ + L + YR L ++++
Sbjct: 66 DSFEMTYRC---LSVLQKVLDTAAEKNWQV------TAVNILTTTEEGYRMLFQDLEKKK 116
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
E +++DC ++ IL Q ++ G +YIL+ + +D F+ AN+T
Sbjct: 117 ERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDIDLNKFKESGANVTG 172
Query: 254 VRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMYDAVYLFAAALQSLGE 312
+++N T+ IM W +N R V + K +AL YD V + A A Q+L
Sbjct: 173 FQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQNLRR 229
Query: 313 RK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
++ C NP+ W G+ I ++ + +G+TG + + + GRR +++L
Sbjct: 230 QRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN-EKGRRTNYTLHV 288
Query: 367 VEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEP 426
+E D + +G WN + T Q + ++NRT VT+ +P
Sbjct: 289 IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVTT---------ILEDP 338
Query: 427 YMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
Y+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG++
Sbjct: 339 YVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 398
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL+++
Sbjct: 399 GELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 458
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
+W+ + AY+GVS++LF ++R S
Sbjct: 459 IWMCIVFAYIGVSVVLFLVSRFS 481
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 529 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 588
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 589 TKEFFR 594
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 594 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 653
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYGIA P L + A L++ QG +KN
Sbjct: 654 TMKVGGNLDSKGYGIATPKGSAL-RNPVNLAVLKLNEQGLLDKLKN 698
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 337 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 396
Query: 725 LIGEL 729
++GEL
Sbjct: 397 MVGEL 401
>gi|357609905|gb|EHJ66742.1| hypothetical protein KGM_16053 [Danaus plexippus]
Length = 870
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 263/544 (48%), Gaps = 104/544 (19%)
Query: 49 DSLHTAKLMCNATS--EGIAAIFGPQSIEN-RNIIESMCQMFDIPHVEAFWDPNKYFIPT 105
DS TA MC TS +GI A+ + ++ S+C +I H+ W P
Sbjct: 63 DSYSTALEMCANTSSDDGIVALVDARPTNGICDVTCSICNKLNISHLILGWQPPATL--E 120
Query: 106 NGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLEN-AHDDDKEIR 164
N ++ +P +IS+ + +I ++WD FTI+YE + + LQ+++ + +D+
Sbjct: 121 NDMYSFFYHPSPEIISRAFATLIKTLNWDKFTILYEDEGSFIRLQEIINTWPYKNDQ--- 177
Query: 165 PGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQN 224
+ ++L P+ D+ R K I +++
Sbjct: 178 -----ILFKRLDPNGDN-RETFKYI--------------------------------FKS 199
Query: 225 YILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNV 284
+IL+ ++A+T++ +D AN++T+ + P + IR WI ++ + N+
Sbjct: 200 FILTA----LDAYTINLEDLADFRANVSTLHLTMPND--IR-----WI---DKDMSNYNI 245
Query: 285 RAETVKIEAALMYDAVYLFAAALQSL---------GERKPLPT---PLSC------ENPS 326
R ET AL DA+ A++S+ R+ +P P C +
Sbjct: 246 RLET-----ALTADALGHLDKAIRSMLMEIEDQEEYSRRLIPIADPPSLCFMKSKEYEEA 300
Query: 327 SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSD-QWKVLGTWNTAFG 385
+W G + + + T G TG +N D + G+R +F L + + ++ Q+ +G W+
Sbjct: 301 AWPQGAALRDALLKTTYKGFTGNVNFD-KYGKRTNFVLHYSKLSNESQFIYVGKWDY--- 356
Query: 386 LNHSRTVEQMDKEKKEK-IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDL 444
+ D EK I R+ +SK+ ++ V +G+PY + ET GY+VDL
Sbjct: 357 --------KTDTLYTEKDITERSSAKSSKSVIRI-VSRKGKPYFDFSNETTTFRGYAVDL 407
Query: 445 IKMI-----ANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITS 499
I I N + Y+F + YG T KW+GLIGE+ + ADLAICDL ITS
Sbjct: 408 IDKIFEHMRNNGKDLKYEFYRVSGDDYGHPIAGTKKWSGLIGEVLDHNADLAICDLAITS 467
Query: 500 ERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFL 559
ER A VDF+ PFM+LGI +L ++P ++PD+FSF++PLS DVW+Y+AT Y+ VS +L
Sbjct: 468 ERNALVDFSTPFMSLGIGLLTKEPEPEEPDMFSFIKPLSLDVWLYLATIYIIVSFVLLIC 527
Query: 560 ARIS 563
AR+S
Sbjct: 528 ARMS 531
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ SN +LY+++ + M+S+RP+VF SN+EG +RV++ +GKYAFFMEST IEY +++ C L
Sbjct: 641 ETSNDTLYKKLWNVMKSARPTVFTTSNEEGRDRVLRSEGKYAFFMESTSIEYYMQRFCSL 700
Query: 633 MQVGGLLDSKGYGIAMP 649
GG LDSK YGIAMP
Sbjct: 701 KMTGGKLDSKDYGIAMP 717
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
AV +R VAGMWWFF LI+ +SYTAN++ FL+ +R + ++ V DL I YG V+ S
Sbjct: 576 AVGSRWVAGMWWFFALIVTASYTANMSTFLSASRRSNDLQEVSDLVDQNSISYGTVDNAS 635
Query: 815 TRNFFKV 821
T FF+
Sbjct: 636 TYRFFET 642
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 669 QGEPYMMKNPETGELYGYSVDLIKMI-----ANELNFTYKFVLERENTYGTLNPQTGKWN 723
+G+PY + ET GY+VDLI I N + Y+F + YG T KW+
Sbjct: 386 KGKPYFDFSNETTTFRGYAVDLIDKIFEHMRNNGKDLKYEFYRVSGDDYGHPIAGTKKWS 445
Query: 724 GLIGELQEQ 732
GLIGE+ +
Sbjct: 446 GLIGEVLDH 454
>gi|358254689|dbj|GAA56161.1| glutamate receptor ionotropic kainate 3 [Clonorchis sinensis]
Length = 1205
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 268/552 (48%), Gaps = 71/552 (12%)
Query: 36 IILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAF 95
I L P+++ ++ DS ++ C + AIFGP + + ++S+ F+IPH++
Sbjct: 186 IQLVPVIETIDGDDSFDASRKACRLLERQVIAIFGPTTPTAVDSVQSLANQFEIPHLQID 245
Query: 96 WDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMD-WDTFTIIYETHDNLVYLQQVLE 154
W Y T G +NV+P + + + + W++ +IY ++L+ +L
Sbjct: 246 WG---YRQSTRGF-ALNVHPHYLAYGQALYDYVRKAEYWESIALIYYEEESLLKYDYLLR 301
Query: 155 NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAK 214
N V +R+ D+++ ++K+ K + + V I
Sbjct: 302 NFDQ----------PVMLRKWEVANDNHKYVIKQFKT-------MQTNFRFIVDIPFWEV 344
Query: 215 EVHLMGDYQNYILSLTSYWINAHTVDFQDFQP-GYANITTVRMINPTNPH---IRSIMN- 269
E L D Q VD Q F ANITT ++ PT IR++++
Sbjct: 345 EEFLFLDIQ--------------LVDSQAFNVVEGANITTFSILRPTGDEGYGIRALLDD 390
Query: 270 ---GWIYEENERGRSLNVRAETVK--IEAALMYDAVYLFAAALQSLGERKPL--PTPLSC 322
I++E VR+ T K +AL+YD + L A L S + PT L+C
Sbjct: 391 VRLSAIHDER------FVRSSTPKRISASALLYDGLSLLALGLLSRARTSDIAPPTDLTC 444
Query: 323 ENPSSWQHGLGIGNLMKSITID---GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGT 379
+ W G+ + N +K+I + G+TG D G R++ L +EY+ D ++ G
Sbjct: 445 SSSRGWSPGISLMNDIKAIQPENFMGLTGTFQFDGH-GWRSNMDLHILEYMPDGFRQFGY 503
Query: 380 WNTAFGL----NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGE--PYMMKNPE 433
WN GL N SRT+++M E K K+ L +T+K K V++QG P K+ +
Sbjct: 504 WNMDEGLVVTKNFSRTLQEMQSELKGKV----LRITTKE-EKPYVMYQGSVNPGEPKSTD 558
Query: 434 TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK--WNGLIGELQEQRADLA 491
G+ +DL+ I ELNFTY L ++TYG G+ W+G++ EL+ ++ADLA
Sbjct: 559 PKHWRGFCIDLLNEIGKELNFTYTINLVPDSTYGNAKIIDGEEVWDGMVQELRTRKADLA 618
Query: 492 ICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLG 551
+ TIT +R +DFT PFM LGISI+Y++ K+ LFSFL+PLS VW Y+ A +
Sbjct: 619 VGSFTITYDRDRVIDFTTPFMYLGISIIYKRIEDKRSHLFSFLQPLSAPVWGYILAATIM 678
Query: 552 VSLLLFFLARIS 563
VSL+LF +AR S
Sbjct: 679 VSLVLFVVARFS 690
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 752 VNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVE 811
V A STR++AG WWFFTLI+ISSYTANLAAFLT RM PI+N EDLAK +IKYG ++
Sbjct: 732 VPHATSTRIIAGFWWFFTLIVISSYTANLAAFLTVARMESPIENAEDLAKQTKIKYGTIQ 791
Query: 812 MGSTRNFFK 820
GST FF+
Sbjct: 792 GGSTAAFFE 800
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Query: 580 YQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLL 639
Y+RM M SS+ V + S +E + RV +E+ YA+ +EST EY +++C+LMQVGGLL
Sbjct: 807 YKRMWQFM-SSQKGVMMNSTEEAIRRVKREE--YAYILESTMNEYYTKRDCELMQVGGLL 863
Query: 640 DSKGYGIAMPT-SKFLAKFSFGFAKLR 665
DSKGYGI +P SK+ S KL+
Sbjct: 864 DSKGYGIGLPEGSKYRDPISETILKLQ 890
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 666 VLFQGE--PYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK-- 721
V++QG P K+ + G+ +DL+ I ELNFTY L ++TYG G+
Sbjct: 543 VMYQGSVNPGEPKSTDPKHWRGFCIDLLNEIGKELNFTYTINLVPDSTYGNAKIIDGEEV 602
Query: 722 WNGLIGELQ 730
W+G++ EL+
Sbjct: 603 WDGMVQELR 611
>gi|307208273|gb|EFN85705.1| Glutamate receptor 1 [Harpegnathos saltator]
Length = 791
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 231/459 (50%), Gaps = 66/459 (14%)
Query: 146 LVYLQQVLENAHDDDKEIRPGRPSVTIRQLP-----PDTDDYRPLLKEIKNSSESHILLD 200
L+ LQQ+ + ++PG S + + + D+ L+E+ S +++LD
Sbjct: 10 LLRLQQIYQG-------LKPGNESFQVETVKRIQNMSEAIDFLRSLEELNRWSNKYVVLD 62
Query: 201 CSMDKTVTIL-KQAKEVHLMGDYQNYILS---LTSYWINAHTVDFQDFQPGYANITTVRM 256
C D I+ ++V L +Y+LS + W + +++ G NIT R+
Sbjct: 63 CPTDMAKDIVVSHVRDVALGKRTYHYLLSGLIMDDRW-ESEVIEY-----GAINITGFRI 116
Query: 257 INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKP- 315
++ T PH++ + GW + S E++ +AALMYDAV++ A ++
Sbjct: 117 VDATRPHVKDFLAGW--HRLDPTTSQGAGRESISAQAALMYDAVFVLVEAFNKFLRKRTD 174
Query: 316 ------LPTP-----------LSCENP----SSWQHGLGIGNLMKSITIDGMTGRINLDS 354
+ TP L C N + W++G I L++ + I+G+TG I +
Sbjct: 175 KNNTRRIATPGSSQPTNGTRSLDCNNNRGWVTPWEYGDKISRLLRKVEIEGLTGEIRFND 234
Query: 355 QTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSK 413
GRR +++L VE + V + W G Q K ++ T +K
Sbjct: 235 D-GRRQNYTLHVVEMTVNSAMVKVAEWTDEGGF-------QAIAAKYVRLRPHTEIEKNK 286
Query: 414 TFAKLRVLFQGEPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYKFVLERENT 465
T+ +L +PY+M+ +TGE+ GY DL ++IA +L +Y+ + ++
Sbjct: 287 TYIVTTIL--EDPYIMRKMSDTGEILVGNDSYEGYCKDLAELIAKKLGISYELRIVKDGK 344
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YGT NP G W+G++GEL + AD+AI +TITSER +DF+ PFM+LGISI+ +KP
Sbjct: 345 YGTENPDVPGGWDGMVGELIRKEADIAIAPITITSERERVIDFSKPFMSLGISIMIKKPI 404
Query: 525 KKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
K++P +FSFL PLS ++WV + AY+ VS++LF ++R S
Sbjct: 405 KQKPGVFSFLNPLSKEIWVCVIFAYIAVSIVLFIVSRFS 443
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Query: 740 FIYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPP 792
+ S+ F + F+ + ++S R+ +WWFFTLI+ISSYTANLAAFLT RM P
Sbjct: 491 IVNSLWFALAAFMQQGCDISPRSISGRIAGSVWWFFTLILISSYTANLAAFLTIERMVTP 550
Query: 793 IKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
I + EDLA ++YG + GST +FF+
Sbjct: 551 INSPEDLASQTEVQYGTLAHGSTWDFFR 578
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S +SLY +M M +SR VFVKS +EG+ RV KGKYA +ES EY E+ CD
Sbjct: 578 RKSQISLYSKMWEFM-NSRKHVFVKSYEEGIRRVRTSKGKYALLIESPTNEYINEREPCD 636
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+GIA P
Sbjct: 637 TMKVGRNLDAKGFGIATP 654
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 671 EPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
+PY+M+ +TGE+ GY DL ++IA +L +Y+ + ++ YGT NP G
Sbjct: 296 DPYIMRKMSDTGEILVGNDSYEGYCKDLAELIAKKLGISYELRIVKDGKYGTENPDVPGG 355
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 356 WDGMVGEL 363
>gi|17028056|gb|AAL34309.1|L49498_1 glutamate receptor subunit 1B [Oreochromis mossambicus]
Length = 549
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 209/392 (53%), Gaps = 32/392 (8%)
Query: 185 LLKEIKNSSESHILLDCSMDKTVTILKQ-AKEVHLMGDYQNYILSLTSYWINAHTVDFQD 243
LL ++ + I++DC + + IL A + + +Y +YIL+ + ++ + +FQ
Sbjct: 4 LLADLDYKKDFQIIIDCELKRLNYILNLIAAQKRNLKNY-HYILANLGF-LDLNVTEFQK 61
Query: 244 FQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLF 303
P N+T +++N ++P ++ I W+ +N + L V +K AL YD V +
Sbjct: 62 LGP---NVTGFQLVNRSDPAVQKINQNWLDFDN---KDLKVARRRLKYTGALTYDGVSVM 115
Query: 304 AAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
A A Q+L R+ P+ W G+ I ++ + ++G+TG + D + G
Sbjct: 116 ATAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRLEGLTGHVQFDER-G 174
Query: 358 RRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAK 417
R +++L +E + +G WN G ++ M +E+ ++N+T VT+ A
Sbjct: 175 HRTNYTLTVMELSHIGPRKIGFWNEKRGYVNTAIYRPM-QEEFYNVQNKTYIVTTILEA- 232
Query: 418 LRVLFQGEPYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNP 471
PYMM KN E + GY +L IA + FTY+ L + YG +P
Sbjct: 233 --------PYMMLKKNHEQFLGNDKYEGYCAELAAEIAKHVGFTYRLELVGDGKYGARDP 284
Query: 472 QTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLF 531
+T WNG++GEL +AD+A+ LTIT R +DFT PFM+LGISI+ +KP K +P +F
Sbjct: 285 ETKMWNGMVGELVYGKADMAVAPLTITLVREQVIDFTKPFMSLGISIMIKKPTKSKPGVF 344
Query: 532 SFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 345 SFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 376
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 460 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGS 519
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 520 TKEFFR 525
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE----TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PYMM KN E + GY +L IA + FTY+ L + YG +P+T WNG+
Sbjct: 233 PYMMLKKNHEQFLGNDKYEGYCAELAAEIAKHVGFTYRLELVGDGKYGARDPETKMWNGM 292
Query: 726 IGEL 729
+GEL
Sbjct: 293 VGEL 296
>gi|358342405|dbj|GAA29947.2| glutamate receptor ionotropic kainate 3 [Clonorchis sinensis]
Length = 1073
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/584 (26%), Positives = 266/584 (45%), Gaps = 66/584 (11%)
Query: 6 IFGPNEEEVATAFEIAVRRINKDFKALPPDI-----ILEPIVQHVENYDSLHTAKLMCNA 60
I EEE+ AF +V N+ L + LEPI++ V + + C
Sbjct: 92 ILAQGEEEMEAAFRTSVDAANQ---VLAQSVNLRTHQLEPIIEVVSRDNVFLATQQACKL 148
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
+ GI A+FGP + S+ F IP+VE +W N Y P G + V+++P+ H
Sbjct: 149 MTNGIVALFGPNVRALSQALLSLANRFGIPYVETYW--NHYATP--GTYSVSMHPKVHSF 204
Query: 121 SKGISVIINDMD-WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
G+ + ++ W II+ + L+ ++ + K ++ +
Sbjct: 205 GLGLYEYLTQVEKWRRMNIIHNQPEKLLKFTTLVNSFEGTAK----------VKTWNSGS 254
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
+ ++ E+ SSE L+D QA++ +M +L LT++ ++A
Sbjct: 255 ASAKSMMAELSTSSEKTFLIDIPA-------WQARDFLVM---DVGLLDLTAFKVDAG-- 302
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET----------- 288
A I T+ +++ T +++ N +Y+ + + E+
Sbjct: 303 ---------AQIKTISILSKTGIK-KAMQNPGVYQASSAPLPIPQTIESNLGPPKLGITG 352
Query: 289 -VKIEAALMYDAVYLFAAALQSLGERKPL-PTPLSCENPSS-WQHGLGIGNLMKSITID- 344
+ + ++YD+ L A L ++ +PL P LSCE P W GL + N MKS++ D
Sbjct: 353 VLNTQFGILYDSFLLLAHGLVTVTRTRPLLPQKLSCERPPGLWPLGLSLINAMKSVSPDV 412
Query: 345 --GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEK 402
G+TG+ D + G+R F L +E + G WN + + + + +
Sbjct: 413 VGGITGQFRFD-RDGQRTMFDLTTLELTEGGFTPSGVWNIDERMKVVKKIIKRPNKHPSS 471
Query: 403 IENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLER 462
+ + L+VT+K + + Y P GY +L+ +A E+ F Y + +
Sbjct: 472 MNDVVLSVTTKADPPFMISISSDAYGNPLPHPDAWTGYCKELLDALAAEVGFNYTIQIPK 531
Query: 463 ENTYG---TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
++ YG TL T +NG++G+L + D+A+ TIT ER VDF+ P+MT+G SIL
Sbjct: 532 DDQYGSAKTLPNGTVVYNGIMGQLIRKEVDMAVAGFTITYEREKLVDFSTPWMTIGGSIL 591
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +P ++P LFSFL+PL+ VW+Y+ YL V L +F AR+S
Sbjct: 592 FTRPKSQKPSLFSFLQPLAPKVWLYVVAIYLAVCLCMFAAARLS 635
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%)
Query: 739 FFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVED 798
++I ++L +A STRL+ G+WWFF LI+I++YTANLAAFLT PI++VED
Sbjct: 664 YYISALLNQGVELAPQATSTRLLTGVWWFFGLIIIATYTANLAAFLTVENTKSPIESVED 723
Query: 799 LAKAGRIKYGCVEMGSTRNFFK 820
LA +IKYG + GS+R+FF+
Sbjct: 724 LANQEKIKYGTLRSGSSRDFFR 745
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
+ + + ++++M M+ P V + G+ERV G YAF +ES+ EY V+++C L
Sbjct: 745 RTTTIPVFKKMGEFMDK-YPDVTTPDTRTGIERV--RAGGYAFILESSWNEYYVQRDCSL 801
Query: 633 MQVGGLLDSKGYGIAMP 649
MQVG LLDSKGYGI P
Sbjct: 802 MQVGALLDSKGYGIGFP 818
>gi|157117385|ref|XP_001658741.1| glutamate receptor, ionotropic ampa, subunit 1, 2, 3, putative
[Aedes aegypti]
gi|108876069|gb|EAT40294.1| AAEL007966-PA [Aedes aegypti]
Length = 859
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 237/466 (50%), Gaps = 78/466 (16%)
Query: 146 LVYLQQVLENAHDDDKEIRPGRPSV---TIRQLPPDTD--DYRPLLKEIKNSSESHILLD 200
L+ LQQ+ + +RPG + T++++ +D ++ ++E+ S HI+LD
Sbjct: 31 LLRLQQIYQG-------LRPGNETFHVETVKRIANVSDAIEFLRTIEELNRWSRKHIVLD 83
Query: 201 CSMDKTVTIL-KQAKEVHLMGDYQNYILS---LTSYWINAHTVDFQDFQPGYANITTVRM 256
CS + I+ +++ L +Y+LS + W + +++ G NIT R+
Sbjct: 84 CSTELAKDIVVSHVRDITLGKRTYHYLLSGLVMDDRW-ESEVIEY-----GAINITGFRI 137
Query: 257 INPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKP- 315
++ + +++ ++GW + + S E + +AALMYDAVY+ A + +KP
Sbjct: 138 VDTSRMYVKEFLDGW--KRLDPQTSQGAGKELISAQAALMYDAVYVLVEAFSKIVRKKPD 195
Query: 316 ---------------LP----TPLSC----ENPSSWQHGLGIGNLMKSITIDGMTGRINL 352
+P P+ C W+HG I ++ + I G+TG I
Sbjct: 196 QFRAYTMRTSRGQFNVPPNGTRPIDCNASGRGVQPWEHGDKISRYLRKVEISGLTGDIRF 255
Query: 353 DSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLN-----HSRTVEQMDKEKKEKIENR 406
+ + G+R +++L VE + V + W+ GL+ ++R M+ E+ N+
Sbjct: 256 N-EDGKRQNYTLHVVEMTVNSAMVKVAEWSDEGGLSPVVAKYTRLKTDMNYER-----NK 309
Query: 407 TLTVTSKTFAKLRVLFQGEPY-MMKNPETGE-------LYGYSVDLIKMIANELNFTYKF 458
T VT+ EPY M++ PE GE GY DL ++A +L Y+
Sbjct: 310 TYIVTT---------IIEEPYVMLRQPEPGETLEGNDRFEGYCKDLADLVAKKLGINYEL 360
Query: 459 VLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGIS 517
+ ++ YG NP G W+G++GEL + AD+AI +TITSER +DF+ PFM+LGIS
Sbjct: 361 RIVKDGQYGAENPDVKGGWDGMVGELVRKEADIAIASMTITSERERVIDFSKPFMSLGIS 420
Query: 518 ILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
I+ ++P K++P +FSFL PLS ++W+ + +Y+GVS++L+ ++R S
Sbjct: 421 IMIKRPVKQKPGVFSFLNPLSKEIWICVLFSYVGVSIVLYIVSRFS 466
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA ++YG + G
Sbjct: 532 RSISGRIVGSVWWFFTLILISSYTANLAAFLTVERMVTPINSPEDLASQTEVQYGTLIHG 591
Query: 814 STRNFFK 820
ST +FF+
Sbjct: 592 STWDFFR 598
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S +SLY RM M +SR VFVK+ EG+ RV KGKYA +ES +Y E+ CD
Sbjct: 598 RKSQISLYSRMWEYM-NSRKHVFVKTYDEGIRRVRTSKGKYALLIESPKNDYTNEREPCD 656
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+GIA P
Sbjct: 657 TMKVGRNLDAKGFGIATP 674
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 671 EPY-MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY M++ PE GE GY DL ++A +L Y+ + ++ YG NP G
Sbjct: 319 EPYVMLRQPEPGETLEGNDRFEGYCKDLADLVAKKLGINYELRIVKDGQYGAENPDVKGG 378
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 379 WDGMVGEL 386
>gi|194770205|ref|XP_001967187.1| GF15914 [Drosophila ananassae]
gi|190619333|gb|EDV34857.1| GF15914 [Drosophila ananassae]
Length = 610
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 219/440 (49%), Gaps = 39/440 (8%)
Query: 131 MDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIK 190
++W IIYE L L + + IRQ P++ YR +L+ I+
Sbjct: 4 LNWTKVAIIYEEDYGLFNLMHSTSET----------KTEIYIRQASPES--YRQVLRAIR 51
Query: 191 NSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYAN 250
I++D + D + ++ M D++ + + T + T D +DF+ N
Sbjct: 52 QKEIYKIIVDTNPDFIKQFFRSILQLQ-MNDHRYHYMFTT---FDLETFDLEDFRYNSVN 107
Query: 251 ITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSL 310
IT R+++ + +++ ++ +N K E+AL+YD+VY FA+ L SL
Sbjct: 108 ITAFRLVDVDSKLYLEVIDHMQKLQHNGLEKIN-GVPYFKTESALIYDSVYSFASGLHSL 166
Query: 311 --GERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVE 368
K LSC + W++GL + N + S + DG+TG N+ GRR+ F L+ ++
Sbjct: 167 HSDANKFNVKNLSCSSDQVWENGLLLYNNINSGSTDGLTG--NVIFVEGRRSKFKLDILK 224
Query: 369 YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM 428
++ + +G W G+N S D I N TL V ++ + PY+
Sbjct: 225 LKQERIEKVGYWEPDVGVNISDPTAFYDS----NIANITLVVMTR---------EERPYV 271
Query: 429 M----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
M KN + + G+ +DL+K I+ ++ F Y L +N YG P+T WNG++ EL
Sbjct: 272 MVKDDKNVTGNDRFEGFCIDLLKAISQQVGFQYTIDLVPDNMYGVFIPETNSWNGIVQEL 331
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
E+RADLA+ +TI R + +DFT PFM LGI IL++ P+ + LFSF+ PL+ ++W
Sbjct: 332 MERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPSSQPTRLFSFMNPLAIEIWF 391
Query: 544 YMATAYLGVSLLLFFLARIS 563
Y+ AY+ VS LF +AR S
Sbjct: 392 YVLAAYMLVSFALFVMARFS 411
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 672 PYMM----KNPETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN + + G+ +DL+K I+ ++ F Y L +N YG P+T WNG++
Sbjct: 269 PYVMVKDDKNVTGNDRFEGFCIDLLKAISQQVGFQYTIDLVPDNMYGVFIPETNSWNGIV 328
Query: 727 GELQEQ 732
EL E+
Sbjct: 329 QELMER 334
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
T F+ G + + + Q FSF+ PL+ ++WVY+A Y+ VS+ ++ +AR+S
Sbjct: 442 TGTFLRQGSGLNPKISDRAQTKFFSFMNPLAIEIWVYIAIGYIFVSISIWIVARLS 497
>gi|125986710|ref|XP_001357118.1| GA18046 [Drosophila pseudoobscura pseudoobscura]
gi|54645445|gb|EAL34184.1| GA18046 [Drosophila pseudoobscura pseudoobscura]
Length = 949
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 267/558 (47%), Gaps = 72/558 (12%)
Query: 38 LEPIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE-AF 95
L P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 61 LYPLIKRLKPEDGSVTMQEQACDLIDNGVAAIFGPSSKAASDIVALVCNNTGIPHIEFDV 120
Query: 96 WDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLV--YLQQVL 153
D N +N+YP ++SK + I+ + W FTI+Y++ D LQ +L
Sbjct: 121 ADEEHVAERPNHQMTLNLYPSQVILSKAYADIVQNFGWRKFTIVYDSSDEKASARLQDLL 180
Query: 154 E--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILK 211
+ H+D V +R+ D DDYR + K I+ E ++LDC V +L
Sbjct: 181 QLREVHND---------VVRVRKFQQD-DDYRVMWKSIR--GERRVVLDCPPGMLVELLN 228
Query: 212 QAKEVHLMGDYQNYILS-LTSYWINAHTVDFQDFQPGYA-NITTVRMINPTNPHIRSIMN 269
+ E L G + + L+ L +Y H + +A NIT R++ P S+
Sbjct: 229 ASSEFGLTGQFNHIFLTNLETY--TDHLEELSAANESFAVNITAARLLLTPEPPSYSLPY 286
Query: 270 GWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKPLPTPLSCENP 325
G++ + + N T+ + L++DA+ LF+ + ++ +R +P +SC+
Sbjct: 287 GYVTQRDNVVFETNDSPRTLLHD--LIHDALQLFSQSWRNASYFYPDRMGVPR-MSCDFA 343
Query: 326 SS----WQHGLGIGNLMKSITIDGM------TGRINLDSQTGRRNSFSLEFVEYVSDQWK 375
++ WQ G + LMK + GM T + D + G+R +F++E V D
Sbjct: 344 AAGGRTWQMGRYLMRLMKGTS--GMNNTNFRTTSLQFDDE-GQRITFNIE----VYDPLD 396
Query: 376 VLG--TWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+G W+ + T +D + ++KI R T R+ G PY N
Sbjct: 397 GIGIAVWDPRGQI----TQRNVDAKVQKKIIYRVAT---------RI---GPPYFSYNET 440
Query: 434 TGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 485
EL GY+VDLI IA E+ F Y+FV + YG + T +WNG+IGE+
Sbjct: 441 AVELNLTGNAIYQGYAVDLIGAIAEEVGFEYQFVPVADQQYGKQDKDTKQWNGIIGEIIN 500
Query: 486 QRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYM 545
A + ICDLTIT RR AVDFT+PFM LG+SIL K K L ++L+P +VW+++
Sbjct: 501 NDAHMGICDLTITQARRTAVDFTVPFMQLGVSILAYKSPHKVKALDAYLQPFGGEVWIWI 560
Query: 546 ATAYLGVSLLLFFLARIS 563
+ ++ L +ARI+
Sbjct: 561 LISVFVMTFLKAIMARIA 578
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN + Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E++CDL
Sbjct: 689 DSNETTYRLAFNLMNNDDPSAYTKDNAEGVDRVQKNRGDYMFLMETTTLEYHREQHCDLR 748
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L + +G+ Y +K
Sbjct: 749 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILHLSERGQLYDLK 790
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 716 NPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISS 775
NP + + E Q + + SI+ + + R+ WW F +I+ +S
Sbjct: 584 NPHPCNRDPEVLENQWHLHNTFWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANS 643
Query: 776 YTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
YTANLAAFLT+++M I N++DL+ + +G + GST N
Sbjct: 644 YTANLAAFLTSSKMEGSIANLKDLSGQKEVHFGTIYGGSTYNLL 687
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 639 LDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQ-----GEPYMMKNPETGEL--------YG 685
LD G + P + + + +++++ G PY N EL G
Sbjct: 395 LDGIGIAVWDPRGQITQRNVDAKVQKKIIYRVATRIGPPYFSYNETAVELNLTGNAIYQG 454
Query: 686 YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
Y+VDLI IA E+ F Y+FV + YG + T +WNG+IGE+
Sbjct: 455 YAVDLIGAIAEEVGFEYQFVPVADQQYGKQDKDTKQWNGIIGEI 498
>gi|395534684|ref|XP_003769369.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Sarcophilus harrisii]
Length = 631
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 155/278 (55%), Gaps = 17/278 (6%)
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
+AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 42 DAALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRIT 99
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT
Sbjct: 100 FNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVT 159
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ EPY+M LYG Y +DL++ +A L FTY+ L +
Sbjct: 160 T---------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLVEDGK 210
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 211 YGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNG 270
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 271 TNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 308
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 352 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 411
Query: 814 STRNFFK 820
+T FFK
Sbjct: 412 ATMTFFK 418
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 418 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 475
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 476 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 518
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ +A L FTY+ L + YG + G+WNG
Sbjct: 164 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELATILGFTYEIRLVEDGKYGAQDDVNGQWNG 223
Query: 725 LIGEL 729
++ EL
Sbjct: 224 MVREL 228
>gi|195160124|ref|XP_002020926.1| GL16417 [Drosophila persimilis]
gi|194117876|gb|EDW39919.1| GL16417 [Drosophila persimilis]
Length = 949
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 268/558 (48%), Gaps = 72/558 (12%)
Query: 38 LEPIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE-AF 95
L P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 61 LYPLIKRLKPEDGSVTMQEQACDLIDNGVAAIFGPSSKAASDIVALVCNNTGIPHIEFDV 120
Query: 96 WDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLV--YLQQVL 153
D N +N+YP ++SK + I+ + W FTI+Y++ D LQ +L
Sbjct: 121 ADEEHVAERPNHQMTLNLYPSQVILSKAYADIVQNFGWRKFTIVYDSSDEKASARLQDLL 180
Query: 154 E--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILK 211
+ H+D V +R+ D DDYR + K I+ E ++LDC V +L
Sbjct: 181 QLREVHND---------VVRVRKFQQD-DDYRVMWKSIR--GERRVVLDCPPGMLVELLN 228
Query: 212 QAKEVHLMGDYQN-YILSLTSYWINAHTVDFQDFQPGYA-NITTVRMINPTNPHIRSIMN 269
+ E L G + + ++ +L +Y H + +A NIT R++ P S+
Sbjct: 229 ASSEFGLTGQFNHIFLTNLETY--TDHLEELSAANESFAVNITAARLLLTPEPPSYSLPY 286
Query: 270 GWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKPLPTPLSCENP 325
G++ + + N T+ + L++DA+ LF+ + ++ +R +P +SC+
Sbjct: 287 GYVTQRDNVVFETNDSPRTLLHD--LIHDALQLFSQSWRNASYFYPDRMGVPR-MSCDFA 343
Query: 326 SS----WQHGLGIGNLMKSITIDGM------TGRINLDSQTGRRNSFSLEFVEYVSDQWK 375
++ WQ G + LMK + GM T + D + G+R +F++E V D
Sbjct: 344 AAGGRTWQMGRYLMRLMKGTS--GMNNTNFRTTSLQFDDE-GQRITFNIE----VYDPLD 396
Query: 376 VLG--TWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE 433
+G W+ + T +D + ++KI R T R+ G PY N
Sbjct: 397 GIGIAVWDPRGQI----TQRNVDAKVQKKIIYRVAT---------RI---GPPYFSYNET 440
Query: 434 TGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE 485
EL GY+VDLI IA E+ F Y+FV + YG + T +WNG+IGE+
Sbjct: 441 AVELNLTGNAIYQGYAVDLIGAIAEEVGFEYQFVPVADQQYGKQDKDTKQWNGIIGEIIN 500
Query: 486 QRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYM 545
A + ICDLTIT RR AVDFT+PFM LG+SIL K K L ++L+P +VW+++
Sbjct: 501 NDAHMGICDLTITQARRTAVDFTVPFMQLGVSILAYKSPHKVKALDAYLQPFGGEVWIWI 560
Query: 546 ATAYLGVSLLLFFLARIS 563
+ ++ L +ARI+
Sbjct: 561 LISVFVMTFLKAIMARIA 578
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN + Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E++CDL
Sbjct: 689 DSNETTYRLAFNLMNNDDPSAYTKDNAEGVDRVQKNRGDYMFLMETTTLEYHREQHCDLR 748
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L + +G+ Y +K
Sbjct: 749 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILHLSERGQLYDLK 790
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 716 NPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAGMWWFFTLIMISS 775
NP + + E Q + + SI+ + + R+ WW F +I+ +S
Sbjct: 584 NPHPCNRDPEVLENQWHLHNTFWLTVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANS 643
Query: 776 YTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFF 819
YTANLAAFLT+++M I N++DL+ + +G + GST N
Sbjct: 644 YTANLAAFLTSSKMEGSIANLKDLSGQKEVHFGTIYGGSTYNLL 687
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 639 LDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQ-----GEPYMMKNPETGEL--------YG 685
LD G + P + + + +++++ G PY N EL G
Sbjct: 395 LDGIGIAVWDPRGQITQRNVDAKVQKKIIYRVATRIGPPYFSYNETAVELNLTGNAIYQG 454
Query: 686 YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
Y+VDLI IA E+ F Y+FV + YG + T +WNG+IGE+
Sbjct: 455 YAVDLIGAIAEEVGFEYQFVPVADQQYGKQDKDTKQWNGIIGEI 498
>gi|344245605|gb|EGW01709.1| Glutamate receptor 3 [Cricetulus griseus]
Length = 717
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 214/405 (52%), Gaps = 44/405 (10%)
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQ---NYILSLTSYWI 234
D ++R +++E+ E L+DC +++ TIL+Q V ++G + +Y+L+ +
Sbjct: 21 DIQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQ---VVILGKHSRGYHYMLANLGF-- 75
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI-YEENERGRSLNVRAETVKIEA 293
+ + G ANIT +++N NP ++ + W+ +E E + N +K +
Sbjct: 76 --TDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNA---PLKYTS 130
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMT 347
AL +DA+ + A A + L ++ + C NP+ W G+ I +K + + GMT
Sbjct: 131 ALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMT 190
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE---KKEKIE 404
G I D+ GRR +++++ E + G WN + R V D++ E
Sbjct: 191 GNIQFDTY-GRRTNYTIDVYEMKVSGSRKAGYWN-----EYERFVPFSDQQISNDSASSE 244
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKF 458
NRT+ VT+ PY+M KN E E Y GY VDL IA + YK
Sbjct: 245 NRTIVVTT---------ILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKL 295
Query: 459 VLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISI 518
+ + YG +P+T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI
Sbjct: 296 SIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISI 355
Query: 519 LYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+ +KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 356 MIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 400
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M S M+S+ PSVF K+ +GV RV K KGK+AF +EST EY E K CD
Sbjct: 515 RRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 574
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + A L++ QG +KN
Sbjct: 575 TMKVGGNLDSKGYGVATPKGSAL-RTPVNLAVLKLSEQGILDKLKN 619
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 450 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 509
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 510 TKEFFR 515
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 257 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 316
Query: 726 IGEL 729
+GEL
Sbjct: 317 VGEL 320
>gi|351695848|gb|EHA98766.1| Glutamate receptor 3, partial [Heterocephalus glaber]
Length = 527
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 228/434 (52%), Gaps = 49/434 (11%)
Query: 149 LQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVT 208
LQ ++E A ++ ++ R I+ D ++R +++E+ E L+DC +++ T
Sbjct: 5 LQAIMEAAVQNNWQV-TARSVGNIK----DVQEFRRIIEEMDRRQEKRYLIDCEVERINT 59
Query: 209 ILKQAKEVHLMGDYQ---NYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR 265
IL+Q V ++G + +Y+L+ + + + G AN+T +++N NP ++
Sbjct: 60 ILEQ---VVILGKHSRGYHYMLANLGF----TDILLERVMHGGANVTGFQIVNNENPMVQ 112
Query: 266 SIMNGWI-YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERK----PLPTPL 320
+ W+ +E E + N +K +AL +DA+ + A A + L ++ +
Sbjct: 113 QFIQRWVRLDEREFPEAKNA---PLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAG 169
Query: 321 SC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLG 378
C NP+ W G+ I +K + + GMTG I D+ GRR +++++ E KV G
Sbjct: 170 DCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDT-YGRRTNYTIDVYEM-----KVTG 223
Query: 379 TWNTAFGLNHSRTVEQMDKE---KKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPE 433
+ + + R V D++ ENRT+ VT+ PY+M KN E
Sbjct: 224 SRKAGYWNEYERFVPFSDQQISNDSASSENRTIVVTT---------ILESPYVMYKKNHE 274
Query: 434 T---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRAD 489
E Y GY VDL IA + YK + + YG +P+T WNG++GEL RAD
Sbjct: 275 QLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRAD 334
Query: 490 LAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAY 549
+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ + AY
Sbjct: 335 IAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAY 394
Query: 550 LGVSLLLFFLARIS 563
+GVS++LF ++R S
Sbjct: 395 IGVSVVLFLVSRFS 408
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 458 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 517
Query: 815 TRNFFKV 821
T+ FF+V
Sbjct: 518 TKEFFRV 524
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPET---GELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E Y GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 265 PYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGM 324
Query: 726 IGEL 729
+GEL
Sbjct: 325 VGEL 328
>gi|332020992|gb|EGI61385.1| Glutamate receptor, ionotropic kainate 1 [Acromyrmex echinatior]
Length = 628
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 144/226 (63%), Gaps = 17/226 (7%)
Query: 343 IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ-WKVLGTWNTAFGLNHSRTVEQMDKEKKE 401
+ G+TG I D Q G R+ F L+ +E + + K +GTWN+ G+N +R+ + + E
Sbjct: 1 MTGLTGIIKFDHQ-GFRSDFVLDIIELNNKEGLKKIGTWNSTKGINFTRSYGDVYSQIVE 59
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFT 455
++N+T VT+ A PY M+ + +L G YSVDLI I+ L F
Sbjct: 60 NLQNKTFIVTTILSA---------PYCMRKDSSEKLTGNAQFEGYSVDLIYEISRLLGFN 110
Query: 456 YKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLG 515
Y F L + YG+ N QT +W+G++ EL EQ+ADLAI DLTIT +R VDFT PFM LG
Sbjct: 111 YTFRLVPDGRYGSYNVQTKEWDGMMKELLEQKADLAIGDLTITYDREQVVDFTTPFMPLG 170
Query: 516 ISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
ISILYRKP K+ P+LFSFL PLS DVW+YMATAYLGVS+LLF LAR
Sbjct: 171 ISILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAR 216
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K+SN S YQRM S M+S++PSVF SN EGV+RV+ KG YAF MEST IEY +E+ CDL
Sbjct: 396 KDSNFSTYQRMWSFMDSAKPSVFTGSNGEGVDRVISGKGSYAFLMESTSIEYVIERKCDL 455
Query: 633 MQVGGLLDSKGYGIAM-PTSKFLAKFSFGFAKLRVLFQGEPYMMK 676
QVGGLLDSKGYGIAM P S + S KL+ +G+ +M+K
Sbjct: 456 TQVGGLLDSKGYGIAMPPNSPYRTAISEAILKLQE--EGKLHMLK 498
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 57/67 (85%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+AVSTR+VAGMWWFFTLIMISSYTANLAAFLT RM+ PI++ EDLAK +IKYG ++ G
Sbjct: 330 KAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALKGG 389
Query: 814 STRNFFK 820
ST FFK
Sbjct: 390 STAAFFK 396
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY M+ + +L G YSVDLI I+ L F Y F L + YG+ N QT +W+G+
Sbjct: 75 PYCMRKDSSEKLTGNAQFEGYSVDLIYEISRLLGFNYTFRLVPDGRYGSYNVQTKEWDGM 134
Query: 726 IGELQEQ 732
+ EL EQ
Sbjct: 135 MKELLEQ 141
>gi|6688642|emb|CAB65182.1| glutamate receptor [Doryteuthis opalescens]
Length = 924
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 158/599 (26%), Positives = 279/599 (46%), Gaps = 78/599 (13%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
+ I +F E++ TAF AV R N + + L P+ + DS +C+
Sbjct: 37 ISIGSVFDVESEKIQTAFRFAVDRFNTIENS--AQLKLNPLSRGNRRTDSFSLGNALCSI 94
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW-----DPNKYFIPTNGVHGVNVYP 115
S+G+ A+FG + ++S F IP++ D + Y + + +N+
Sbjct: 95 MSKGVFAVFGKANSSMLATVKSYSDTFQIPYLTTSMAMNTTDQSPYML---FLRPINI-- 149
Query: 116 ESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQL 175
+ I +I + W IY +++ L+ +QQ+ + D ++ ++ +++
Sbjct: 150 ------RAIVDLIEHLGWRVVHYIYISNEGLMRVQQLFQVMGKSDLQM-----TLNVKR- 197
Query: 176 PPDTDDYRPLLKEIKNSS---ESHILLDCSM---DKTVTILKQAKEVHLMGDYQNYILSL 229
D Y +LKE+ +++ + H +LD S+ + + +L + VH N
Sbjct: 198 ASDVTSY-VILKELHHTNPELDIHAVLDMSIPMASELMNLLSEDPRVH------NRRFHF 250
Query: 230 TSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV 289
+DF N++ ++++ N +R ++ W + V+ T+
Sbjct: 251 LLVEPGIQELDFAKIGLYGYNVSGFQLVDFNNMTVRLFLSDWTKIDPAEWPGAGVK--TI 308
Query: 290 KIEAALMYDAVYLFAAALQSLGE-----------RKPLPTPLSC--ENPSSWQHGLGIGN 336
EAAL DAV LF A+++L R + +C E + W G +
Sbjct: 309 TYEAALAVDAVSLFTRAMKNLSNLGLFESLFIRARSGANSSKTCAAERLNVWNKGKHVLK 368
Query: 337 LMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLN--HSRTVE 393
MK DG+TGR+ D + G R F+L+ ++ + V +G W GL + V
Sbjct: 369 AMKETEFDGLTGRVAFDDR-GHRKEFTLDVLDIGITRGAVKIGYWTPRDGLTMLKRKMVR 427
Query: 394 QMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPE---------TGELYGYSVDL 444
++ E NRT VT+ Q PY+MK P+ + GY VDL
Sbjct: 428 PINAPSSE---NRTRIVTT---------IQTPPYIMKKPKPIDGHPLIGNDKYEGYCVDL 475
Query: 445 IKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAA 504
+ +A+E+ F Y F + ++ YG+ WNG++GEL AD+AI LTI++ R
Sbjct: 476 ARKVAHEVGFDYVFQMVKDGAYGS-KLANDSWNGMVGELIRLEADMAIAPLTISAVRERV 534
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+DF+ PFM+LGISI+ +KPA ++ +FSFL+PLS+++W+ + A++GVS++LF ++R S
Sbjct: 535 IDFSKPFMSLGISIMIKKPADQKAHVFSFLDPLSYEIWMCILFAFIGVSVVLFLVSRFS 593
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%)
Query: 751 FVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCV 810
F ++S R+V +WWFFTLI+ISSYTANLAAFLT RM+ PI++ EDLAK I+YG +
Sbjct: 629 FSPRSISGRIVGSVWWFFTLIIISSYTANLAAFLTVERMSTPIESAEDLAKQTEIEYGTL 688
Query: 811 EMGSTRNFFK 820
G+T FFK
Sbjct: 689 RSGTTEAFFK 698
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEK-NCD 631
K S V++Y+RM + M S PSVF ++G+ V GKYAF +ES+ +Y + CD
Sbjct: 698 KTSKVAVYERMWAYMTSKTPSVFTDKIQDGITSVRDSNGKYAFLVESSTNDYINNRLPCD 757
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLA-KFSFGFAKLR 665
M+VG LDSKG+GIA P L K + KLR
Sbjct: 758 TMKVGSNLDSKGFGIATPAGSDLGDKLTLAVLKLR 792
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 669 QGEPYMMKNPE---------TGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 719
Q PY+MK P+ + GY VDL + +A+E+ F Y F + ++ YG+
Sbjct: 445 QTPPYIMKKPKPIDGHPLIGNDKYEGYCVDLARKVAHEVGFDYVFQMVKDGAYGS-KLAN 503
Query: 720 GKWNGLIGEL 729
WNG++GEL
Sbjct: 504 DSWNGMVGEL 513
>gi|402867761|ref|XP_003898003.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Papio
anubis]
Length = 613
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 155/278 (55%), Gaps = 17/278 (6%)
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
+AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGRI
Sbjct: 24 DAALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRIT 81
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT
Sbjct: 82 FNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVT 141
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ EPY++ LYG Y +DL++ ++ L FTY+ L +
Sbjct: 142 T---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGK 192
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 193 YGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNG 252
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 253 TNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 290
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 334 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 393
Query: 814 STRNFFK 820
+T FFK
Sbjct: 394 ATMTFFK 400
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 400 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 457
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 458 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 500
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 146 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 205
Query: 725 LIGEL 729
++ EL
Sbjct: 206 MVREL 210
>gi|296484117|tpg|DAA26232.1| TPA: glutamate receptor, ionotropic, kainate 2 [Bos taurus]
Length = 606
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 160/291 (54%), Gaps = 20/291 (6%)
Query: 279 GRSLNVRAETVKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLM 338
G S+ +ET +AALMYDAV++ + +Q + + L C W+ G +L+
Sbjct: 7 GSSMGKGSET---DAALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLI 61
Query: 339 KSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKE 398
K +G+TGRI + G R F L+ + + + +GTW+ A GLN + + +
Sbjct: 62 KEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPAN 121
Query: 399 KKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANEL 452
+ + NR+L VT+ EPY++ LYG Y +DL++ ++ L
Sbjct: 122 ITDSLSNRSLIVTT---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTIL 172
Query: 453 NFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
FTY+ L + YG + G+WNG++ EL + +ADLA+ L IT R +DF+ PFM
Sbjct: 173 GFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFM 232
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
TLGISILYRKP P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 233 TLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 283
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 327 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 386
Query: 814 STRNFFK 820
+T FFK
Sbjct: 387 ATMTFFK 393
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 393 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 450
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 451 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 493
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 139 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 198
Query: 725 LIGEL 729
++ EL
Sbjct: 199 MVREL 203
>gi|395817714|ref|XP_003782301.1| PREDICTED: glutamate receptor 1 [Otolemur garnettii]
Length = 869
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 264/578 (45%), Gaps = 93/578 (16%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 IQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ II+ W F IY D D+
Sbjct: 130 QDALISIIDHYKWQKFVYIY-----------------DADRAY----------------- 155
Query: 181 DYRPLLKEIKNSSESHIL--LDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
++ +SES + +D + I+K K G +YIL+ +
Sbjct: 156 -------QVSAASESRLKSSIDLFIVHATIIIKLEKN----GIGYHYILANLGF----MD 200
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRS-LNVRAETVKIEAALMY 297
+D F+ AN+T +++N T+ IM W +N R V + K +AL Y
Sbjct: 201 IDLNKFKESGANVTGFQLVNYTDTIPAKIMQQW---KNSDARDHTRVDWKRPKYTSALTY 257
Query: 298 DAVYLFAAALQSLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRIN 351
D V + A A QSL ++ C NP+ W G+ I ++ + +G+TG +
Sbjct: 258 DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQ 317
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR +++L +E D + +G WN + T Q + ++NRT VT
Sbjct: 318 FN-EKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYIVT 375
Query: 412 SKTFAKLRVLFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENT 465
+ +PY+M KN E + Y GY V+L IA + ++Y+ + +
Sbjct: 376 T---------ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGK 426
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG +P T WNG++GEL RAD+A+ LTIT R +DF+ PFM+LGISI+ +KP K
Sbjct: 427 YGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 486
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 487 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 524
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG +E GS
Sbjct: 572 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGS 631
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 632 TKEFFR 637
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E K CD
Sbjct: 637 RRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCD 696
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYGIA P L
Sbjct: 697 TMKVGGNLDSKGYGIATPKGSAL 719
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 671 EPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
+PY+M KN E + Y GY V+L IA + ++Y+ + + YG +P T WNG
Sbjct: 380 DPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNG 439
Query: 725 LIGEL 729
++GEL
Sbjct: 440 MVGEL 444
>gi|355561928|gb|EHH18560.1| hypothetical protein EGK_15196 [Macaca mulatta]
gi|355748777|gb|EHH53260.1| hypothetical protein EGM_13866 [Macaca fascicularis]
Length = 769
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 159/280 (56%), Gaps = 8/280 (2%)
Query: 284 VRAETVKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITI 343
V ++ +AALMYDAV++ + A+Q + + L C W+ G +L+K
Sbjct: 175 VYDDSTGTDAALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHW 232
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKI 403
+G+TGRI + G R F L+ + + + +GTW+ A GLN + + + + +
Sbjct: 233 EGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSL 292
Query: 404 ENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERE 463
NR+L VT+ L VLF+ + + E GY +DL++ ++ L FTY+ L +
Sbjct: 293 SNRSLIVTTI----LYVLFKKSDKPLYGNDRFE--GYCIDLLRELSTILGFTYEIRLVED 346
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 347 GKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKP 406
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 407 NGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 446
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 490 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 549
Query: 814 STRNFFK 820
+T FFK
Sbjct: 550 ATMTFFK 556
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 556 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 613
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 614 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 656
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 1 MKIVGIF-----GPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAK 55
++ GIF GP E AF AV IN++ + L P+ L Q + YDS +K
Sbjct: 36 LRFGGIFEYVESGPMGAE-ELAFRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEASK 93
Query: 56 LMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNVY 114
C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++Y
Sbjct: 94 KACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSLY 150
Query: 115 PESHLISKGISVIINDMDWDTFTIIYE 141
P+ +S+ I ++ W T T++Y+
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYD 177
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 685 GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 729
GY +DL++ ++ L FTY+ L + YG + G+WNG++ EL
Sbjct: 322 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVREL 366
>gi|342350996|pdb|3QLT|A Chain A, Crystal Structure Of A Gluk2 (Glur6) Glycan Wedge
Homodimer Assembly
gi|342350997|pdb|3QLT|B Chain B, Crystal Structure Of A Gluk2 (Glur6) Glycan Wedge
Homodimer Assembly
gi|342351000|pdb|3QLU|C Chain C, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD DIMER
ASSEMBLY
gi|342351001|pdb|3QLU|D Chain D, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD DIMER
ASSEMBLY
Length = 395
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 39/415 (9%)
Query: 1 MKIVGIF-----GP-NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTA 54
++ GIF GP EE+A F AV IN++ + L P+ L Q + YDS +
Sbjct: 5 LRFGGIFEYVESGPMGAEELA--FRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEAS 61
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNV 113
K C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++
Sbjct: 62 KKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSL 118
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S+ I ++ W T T++Y+ L+ LQ++++ P R ++
Sbjct: 119 YPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIK---------APSRYNLRLK 169
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI +
Sbjct: 170 IRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALNMSMMTEYYHYIFTT-- 227
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETV 289
++ +D + ++ N+T R++N N + SI+ W E + + + +
Sbjct: 228 --LDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFM 285
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGR
Sbjct: 286 TTDAALMYDAVHVVSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGR 343
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
I + G R F L+ + + + +GTW+ A GLN M + +K K+E
Sbjct: 344 ITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLN-------MTESQKGKLE 391
>gi|238537978|pdb|3H6G|A Chain A, Crystal Structure Of The Glur6 Amino Terminal Domain Dimer
Assembly
gi|238537979|pdb|3H6G|B Chain B, Crystal Structure Of The Glur6 Amino Terminal Domain Dimer
Assembly
gi|238537980|pdb|3H6H|A Chain A, Crystal Structure Of The Glur6 Amino Terminal Domain Dimer
Assembly Mpd Form
gi|238537981|pdb|3H6H|B Chain B, Crystal Structure Of The Glur6 Amino Terminal Domain Dimer
Assembly Mpd Form
gi|342351004|pdb|3QLV|C Chain C, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
gi|342351005|pdb|3QLV|D Chain D, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
gi|342351007|pdb|3QLV|F Chain F, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
gi|342351009|pdb|3QLV|H Chain H, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
gi|342351011|pdb|3QLV|J Chain J, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
Length = 395
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 39/415 (9%)
Query: 1 MKIVGIF-----GP-NEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTA 54
++ GIF GP EE+A F AV IN++ + L P+ L Q + YDS +
Sbjct: 5 LRFGGIFEYVESGPMGAEELA--FRFAVNTINRN-RTLLPNTTLTYDTQKINLYDSFEAS 61
Query: 55 KLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTN-GVHGVNV 113
K C+ S G+AAIFGP + N ++S+C +PH++ W K+ + N V++
Sbjct: 62 KKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRW---KHQVSDNKDSFYVSL 118
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S+ I ++ W T T++Y+ L+ LQ++++ P R ++
Sbjct: 119 YPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKA---------PSRYNLRLK 169
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP DT D +PLLKE+K E H++ DCS + ILKQA + +M +Y +YI +
Sbjct: 170 IRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-- 227
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN--VRAETV 289
++ +D + ++ N+T R++N N + SI+ W E + + + +
Sbjct: 228 --LDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFM 285
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGR
Sbjct: 286 TTDAALMYDAVHVVSVAVQQFPQMT--VSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGR 343
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
I + G R F L+ + + + +GTW+ A GLN M + +K K+E
Sbjct: 344 ITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLN-------MTESQKGKLE 391
>gi|410959744|ref|XP_003986460.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Felis
catus]
Length = 640
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 154/278 (55%), Gaps = 17/278 (6%)
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
+AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 51 DAALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRIT 108
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT
Sbjct: 109 FNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVT 168
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ EPY++ LYG Y +DL++ ++ L FTY+ L +
Sbjct: 169 T---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGK 219
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 220 YGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNG 279
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 280 TNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 317
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 361 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 420
Query: 814 STRNFFK 820
+T FFK
Sbjct: 421 ATMTFFK 427
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 427 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 484
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 485 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 527
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 173 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 232
Query: 725 LIGEL 729
++ EL
Sbjct: 233 MVREL 237
>gi|350578311|ref|XP_003121367.3| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2,
partial [Sus scrofa]
Length = 598
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 154/278 (55%), Gaps = 17/278 (6%)
Query: 292 EAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
+AALMYDAV++ + +Q + + L C W+ G +L+K +G+TGRI
Sbjct: 2 DAALMYDAVHVVSVGVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRIT 59
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ G R F L+ + + + +GTW+ A GLN + + + + + NR+L VT
Sbjct: 60 FNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVT 119
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ EPY++ LYG Y +DL++ ++ L FTY+ L +
Sbjct: 120 T---------ILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGK 170
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG + G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 171 YGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNG 230
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 231 TNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 268
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 757 STRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTR 816
STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G+T
Sbjct: 322 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATM 381
Query: 817 NFFK 820
FFK
Sbjct: 382 TFFK 385
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 385 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 442
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 443 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 485
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY++ LYG Y +DL++ ++ L FTY+ L + YG + G+WNG
Sbjct: 124 EPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNG 183
Query: 725 LIGEL 729
++ EL
Sbjct: 184 MVREL 188
>gi|291221983|ref|XP_002730998.1| PREDICTED: AMPA receptor subunit 2b-like, partial [Saccoglossus
kowalevskii]
Length = 792
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 228/464 (49%), Gaps = 67/464 (14%)
Query: 133 WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRP----GRPSVTIRQLPPDTDDYRPLLKE 188
WD F +Y+ + L LQ +LE A D ++RP G SV +L +
Sbjct: 56 WDKFNYLYDDTEGLYRLQLLLEVAADRYLDVRPYHLRGVTSVI------------NILNK 103
Query: 189 IKNSSESHILLDCSM-DKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPG 247
I+ S + +LD S +T IL Q + + +D ++F+ G
Sbjct: 104 IRVSGITKTILDTSPPSRTSAILTQ----------------------DVYHIDLENFKYG 141
Query: 248 YANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
AN+T RM++ TN ++ + W + N+ VK +AAL+YDAV + A
Sbjct: 142 GANVTGFRMVDETNTRLKEYRDVWNQFTEKYAEFENI--TYVKFQAALVYDAVSVITEAF 199
Query: 308 QSL-GERKPLPTPL-SCENPSS--WQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFS 363
+ + + + + L +C+N W+ G + N +K + I G+TG I D + GRR +++
Sbjct: 200 RLMKNDHVDIDSELINCDNKHQKPWRDGEKMNNYLKEVDIQGLTGPIRFD-KLGRRTNYT 258
Query: 364 LEFVEYVSDQWKVLGTWNTAFGLNHSRTV----EQMDKEKKEKI----ENRTLTVTSKTF 415
++ + V D+ T F H + + D + I + L+ + +F
Sbjct: 259 MDILSLVPDE-----TGKARFDKCHDYFIVVPCGKWDSSGEGHIGIGSDGEVLSFPADSF 313
Query: 416 AK-LRVL-FQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYG 467
+ LRV +PY M E G Y VDL+ IA+ L Y++ + + YG
Sbjct: 314 NRTLRVTTIDDDPYFMLKKNADEFEGMDKYEGYCVDLMAKIADVLKIKYEWQIVEDGNYG 373
Query: 468 TLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQ 527
LN T +W+G+IGEL E +ADL + LTITS+R V+FT PFM LGISI+ +KP +
Sbjct: 374 RLNEDTNRWDGMIGELIENKADLVVAPLTITSDREPYVEFTTPFMGLGISIMIKKPQNTK 433
Query: 528 PDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYS 571
P +FSFL PLS ++W+ + AY+GVS++LF ++R S L +S
Sbjct: 434 PGVFSFLHPLSHEIWMCIVFAYVGVSVVLFLVSRFSPYECLWFS 477
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ +DLA I YG + GS
Sbjct: 492 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESADDLATQTEISYGTLTSGS 551
Query: 815 TRNFFK 820
T +FF+
Sbjct: 552 TTSFFE 557
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
++SGS + K S V Y RM + M +++PSVF S KEG+ERV ++KG+YAF +EST
Sbjct: 547 LTSGSTTSFFEK-STVPTYTRMWAYMSTTQPSVFTNSIKEGIERVRRQKGRYAFLLESTM 605
Query: 622 IEY-EVEKNCDLMQVGGLLDSKGY 644
EY K CD ++VG L+S Y
Sbjct: 606 NEYINQRKPCDTIKVGNNLNSYNY 629
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 664 LRVL-FQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLN 716
LRV +PY M E G Y VDL+ IA+ L Y++ + + YG LN
Sbjct: 317 LRVTTIDDDPYFMLKKNADEFEGMDKYEGYCVDLMAKIADVLKIKYEWQIVEDGNYGRLN 376
Query: 717 PQTGKWNGLIGELQE 731
T +W+G+IGEL E
Sbjct: 377 EDTNRWDGMIGELIE 391
>gi|310942890|pdb|3OLZ|A Chain A, Crystal Structure Of The Gluk3 (Glur7) Atd Dimer At 2.75
Angstrom Resolution
gi|310942891|pdb|3OLZ|B Chain B, Crystal Structure Of The Gluk3 (Glur7) Atd Dimer At 2.75
Angstrom Resolution
Length = 398
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 203/404 (50%), Gaps = 41/404 (10%)
Query: 1 MKIVGIF----GPNEEEVAT---AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHT 53
++I GIF GPN + + AF + IN++ + L P+ L +Q + +DS
Sbjct: 5 IRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRN-RTLLPNTTLTYDIQRIHFHDSFEA 63
Query: 54 AKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNV 113
K C+ + G+ AIFGP N ++S+C ++PH++ W + + VN+
Sbjct: 64 TKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRW--KHHPLDNKDTFYVNL 121
Query: 114 YPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV--T 171
YP+ +S I ++ + W + T++Y+ L+ LQ+++ + P R ++
Sbjct: 122 YPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELI---------MAPSRYNIRLK 172
Query: 172 IRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTS 231
IRQLP D+DD RPLLKE+K E I+ DCS ILKQA + +M +Y ++I +
Sbjct: 173 IRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-- 230
Query: 232 YWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET--- 288
++ + +D + ++ N+T R++N NPH+ +I+ W E + RAE+
Sbjct: 231 --LDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAA----PRAESGLL 284
Query: 289 ---VKIEAALMYDAVYLFAAALQSLGERKPLPT--PLSCENPSSWQHGLGIGNLMKSITI 343
+ +AAL+YDAV++ + Q R P T L C +W+ G N +K
Sbjct: 285 DGVMMTDAALLYDAVHIVSVCYQ----RAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQW 340
Query: 344 DGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLN 387
+G+TGRI + +G R F L+ + D + +G W+ A GLN
Sbjct: 341 EGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLN 384
>gi|194853850|ref|XP_001968234.1| GG24758 [Drosophila erecta]
gi|190660101|gb|EDV57293.1| GG24758 [Drosophila erecta]
Length = 940
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 264/563 (46%), Gaps = 86/563 (15%)
Query: 40 PIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP 98
P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 62 PLIKRLKPEDGSVTLQEQACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIE----- 116
Query: 99 NKYFIPTNGVHG--------VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVY-- 148
+ I GV +N+YP ++SK + I+ + W FTI+Y+ D
Sbjct: 117 --FDIADEGVQAEKPNHQLTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDAKAAAR 174
Query: 149 LQQVLE--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
LQ +L+ H+D V +R+ D DDYR + K I+ E ++LDC
Sbjct: 175 LQDLLQLREVHND---------VVRVRKFQRD-DDYRVMWKSIR--GERRVVLDCEPSML 222
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
V +L + E L G Y + L+ + + D + NIT R++ +P S
Sbjct: 223 VELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVSPDPPAYS 282
Query: 267 I-------MNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKP 315
+ +G +YE +E R+L L++DA+ LFA + ++ +R
Sbjct: 283 LPYGYVTQRDGIVYESSEPPRTL---------LHDLIHDALQLFAQSWRNASFFYPDRMA 333
Query: 316 LPTPLSCENPSS----WQHGLGIGNLMKSIT-IDGMTGRINLDS--QTGRRNSFSLEFVE 368
+P ++C+ +S W G + LMK + ++ + R ++ G+R +F++E +
Sbjct: 334 VPR-VTCDFAASGGRTWAMGRYLARLMKGTSGVNSTSFRTSILQFDDDGQRITFNIEVYD 392
Query: 369 YVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYM 428
+ G + T +D + ++K+ R T R+ G PY
Sbjct: 393 ALD------GIGRAIWDPRGQITQLNVDVKTQKKMVYRVAT---------RI---GPPYF 434
Query: 429 MKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 480
N EL GY+VDLI IA + F Y+FV + YG L+ +T +WNG+I
Sbjct: 435 SYNETALELNLTGNALYQGYAVDLIDAIARYVGFEYEFVPVADQQYGKLDKETKQWNGII 494
Query: 481 GELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFD 540
GE+ A + ICDLTIT R+ AVDFT+PFM LG+SIL K + L ++LEP +
Sbjct: 495 GEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLEPFGGE 554
Query: 541 VWVYMATAYLGVSLLLFFLARIS 563
VW+++ + +++L +ARIS
Sbjct: 555 VWIWILISVFVMTVLKTIVARIS 577
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN ++Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E+NCDL
Sbjct: 688 DSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDLR 747
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMM-----KNPET 680
VG K Y IA+P F A++ + A L++ +GE Y + KNP T
Sbjct: 748 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNT 798
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLT+++M I N++DL+ ++K+G + GST N
Sbjct: 626 RMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSITNLKDLSAQKKVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI IA + F Y+FV + YG L+ +T +
Sbjct: 430 GPPYFSYNETALELNLTGNALYQGYAVDLIDAIARYVGFEYEFVPVADQQYGKLDKETKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|47216794|emb|CAG10116.1| unnamed protein product [Tetraodon nigroviridis]
Length = 879
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 244/515 (47%), Gaps = 40/515 (7%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S+G+ AI G + N++ S C + F P+ + I T + + PE
Sbjct: 1 CSQFSKGVYAIIGLYDRKTVNMLTSFCGALHV----CFITPS-FPIETANQFVIQLRPE- 54
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
+ + +I W F +Y + L LQ+VL+ A + + + SV + +
Sbjct: 55 --LQDALVGVIEHYGWTKFVYMYSSDSGLSVLQKVLDTAAERNWLVT----SVNVETMTE 108
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
+ + + +++ E I++DC ++ ILK+ E +YIL+ +
Sbjct: 109 AS--FLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQGKNAKSYHYILANLGFL---- 162
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMY 297
+D D + G ANIT +++N ++P + ++ W+ +N+ + + +K AL Y
Sbjct: 163 DIDLTDLRKGGANITGFQLVNNSDPTVSRVVQQWVEFDNKDSK---MAKSGLKYTGALTY 219
Query: 298 DAVYLFAAALQSLGE------RKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRIN 351
D V + + A Q+L R+ P+ W G+ I ++ + IDG+TG I
Sbjct: 220 DGVKVMSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQ 279
Query: 352 LDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
+ + GRR ++++ +E K +G WN ++ + + + ++NRT VT
Sbjct: 280 FN-EKGRRTNYTVSIMELAPSGPKKVGYWNEEEKYVNTASFVRGSNDTY-GLQNRTYIVT 337
Query: 412 S---KTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
+ ++ F P S L + +F VL
Sbjct: 338 TILQCPIPLVKTAFFSPSSHYTVPSGSHDLLSSEMLWRNCGAARSFLAPLVLR------- 390
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+P+T WNG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 391 -DPETKMWNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKP 449
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 450 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 484
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ G
Sbjct: 574 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDAG 633
Query: 814 STRNFFK 820
ST+ FF+
Sbjct: 634 STKEFFR 640
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S ++++++M S M+++ PSVFV++ EGV RV K KGKYA+ +EST EY E K CD
Sbjct: 640 RRSKIAVFEKMWSYMKAADPSVFVRTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCD 699
Query: 632 LMQ 634
M+
Sbjct: 700 TMK 702
>gi|344269205|ref|XP_003406444.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 5-like [Loxodonta africana]
Length = 998
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 275/585 (47%), Gaps = 74/585 (12%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PL
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPL-------- 202
Query: 194 ESHILLDCSMD-KTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANIT 252
C+ D + QA E+ + + YIL+ + I + +NI
Sbjct: 203 -------CADDNQEAGPSTQASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNIL 251
Query: 253 TVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
M N ++P +RS+ W EN + A + AALM+DAV++ A++
Sbjct: 252 GFSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVNAVR 305
Query: 309 SLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFV 367
L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L +
Sbjct: 306 ELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRIL 364
Query: 368 EYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGE 425
E + +G W N +N + +D + + N+TL VT+
Sbjct: 365 EKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT---------ILEN 411
Query: 426 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 479
PY+M+ P L G + VD+++ +A L F Y+ L + YG P G W G+
Sbjct: 412 PYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPN-GSWTGM 470
Query: 480 IGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSF 539
+GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 471 VGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSP 530
Query: 540 DVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 531 AVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 570
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 655 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 711
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETG 681
EY NC+L Q+GGLLD+KGYGI MP G A RV G P ++N + G
Sbjct: 712 NEYHRRLNCNLTQIGGLLDTKGYGIGMP---------LGMAA-RVEGGGAP-CIRNQDVG 760
Query: 682 ELYG 685
+G
Sbjct: 761 AGWG 764
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 599 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 658
Query: 814 STRNFFK 820
ST FF+
Sbjct: 659 STMTFFQ 665
>gi|402905710|ref|XP_003915657.1| PREDICTED: glutamate receptor, ionotropic kainate 5 [Papio anubis]
Length = 982
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 163/595 (27%), Positives = 279/595 (46%), Gaps = 78/595 (13%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIEN 76
A +A +IN + +P +E + ++ T MC +G+ ++ GP S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 77 RN-IIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASTVSHICGEKEIPHIKVGPEETPRLQYL---RFASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSS 193
+ ++I + L+ L++++ + + ++++R L D+ D PLLKEI++
Sbjct: 159 PSASLICAKAECLLRLEELV-------RGFLISKETLSVRMLD-DSRDPTPLLKEIRDDK 210
Query: 194 ESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITT 253
S I++D + + IL++A E+ + + YIL+ + I + +NI
Sbjct: 211 VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNILG 266
Query: 254 VRMINPTNPH----IRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQS 309
M N ++P +RS+ W EN + A + AALM+DAV++ +A++
Sbjct: 267 FSMFNTSHPFYPEFVRSLNMSW--RENCEASTYPGPA----LSAALMFDAVHVVVSAVRE 320
Query: 310 LGERKP------------LPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTG 357
L + L P S P S + DG+TGR+ +S+ G
Sbjct: 321 LNRSQXXXXXXXXXXXAHLWAPASSLCPPSPPC---------QVEYDGLTGRVEFNSK-G 370
Query: 358 RRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTF 415
+R +++L +E + +G W N +N + +D + + N+TL VT+
Sbjct: 371 QRTNYTLRILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVTT--- 423
Query: 416 AKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTL 469
PY+M+ P L G + VD+++ +A L F Y+ L + YG
Sbjct: 424 ------ILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAP 477
Query: 470 NPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPD 529
P G W G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P
Sbjct: 478 EPN-GSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPG 536
Query: 530 LFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
FSFL+P S VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 537 YFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 586
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ +YAF +EST
Sbjct: 671 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN--SRYAFLLESTM 727
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 728 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 772
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 616 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 675
Query: 815 TRNFFK 820
T FF+
Sbjct: 676 TMTFFQ 681
>gi|449282922|gb|EMC89653.1| Glutamate receptor, ionotropic kainate 2 [Columba livia]
Length = 600
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 154/280 (55%), Gaps = 17/280 (6%)
Query: 290 KIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+ +AALMYDAV++ + A+Q + + L C W+ G +L+K +G+TGR
Sbjct: 9 QTDAALMYDAVHVVSVAVQQFPQMTV--SSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGR 66
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I + G R F L+ + + + +GTW+ GLN + + + + NR+L
Sbjct: 67 ITFNKTNGLRTDFDLDVISLKEEGLEKVGTWDPLSGLNMTENQKGKPANITDSLSNRSLI 126
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERE 463
VT+ EPY+M LYG Y +DL++ ++ L F+Y+ L +
Sbjct: 127 VTT---------ILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVED 177
Query: 464 NTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKP 523
YG +G+WNG++ EL + +ADLA+ L IT R +DF+ PFMTLGISILYRKP
Sbjct: 178 GKYGAQEDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKP 237
Query: 524 AKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P +FSFL PLS D+W+Y+ AYLGVS +LF +AR S
Sbjct: 238 NGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFS 277
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 321 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 380
Query: 814 STRNFFK 820
+T FFK
Sbjct: 381 ATMTFFK 387
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y +M + M S R SV VKSN+EG++RV+ YAF MEST IE+ ++NC+L
Sbjct: 387 KKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD--YAFLMESTTIEFVTQRNCNL 444
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 445 TQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE--EGKLHMMK 487
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL++ ++ L F+Y+ L + YG +G+WNG
Sbjct: 133 EPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVEDGKYGAQEDASGQWNG 192
Query: 725 LIGEL 729
++ EL
Sbjct: 193 MVREL 197
>gi|194758803|ref|XP_001961648.1| GF15073 [Drosophila ananassae]
gi|190615345|gb|EDV30869.1| GF15073 [Drosophila ananassae]
Length = 942
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 261/551 (47%), Gaps = 62/551 (11%)
Query: 40 PIVQHVENYDS-LHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVE-AFWD 97
P+V+ +++ DS + + C+ G+AAIFGP + +I+ +C IPH+E D
Sbjct: 61 PLVKRLKSDDSSVAIQEQACDLIDNGVAAIFGPSAKAASDIVAVVCNSTGIPHLEFDVAD 120
Query: 98 PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLV--YLQQVLE- 154
N +N+YP ++SK + I+ + W FTI+Y+ D LQ +L+
Sbjct: 121 EEHLEEKPNHQMTLNLYPSQVILSKAYADIVQNFGWRKFTIVYDATDAKASARLQDLLQL 180
Query: 155 -NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQA 213
H+D V +R+ D +DYR + K I+ E ++LDC D V +L +
Sbjct: 181 RELHND---------VVRVRKFTKD-EDYRVMWKSIR--GERRVVLDCPPDMLVDVLNSS 228
Query: 214 KEVHLMGDYQN-YILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWI 272
E G Y + ++ +L +Y N + + G NIT R++ +P I S G++
Sbjct: 229 TEFGQTGLYNHIFLTNLETYTDNIGELAADNETFG-VNITAARLLLNPDPPIYSQPYGYV 287
Query: 273 YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKPLPTPLSCENPSS- 327
+ N+ N + T+ + L++DA+ LFA + ++ +R +P ++C+ +S
Sbjct: 288 IQRNDMVVESNEPSRTLHHD--LVHDALQLFAQSWRNASFFYPDRMQVPR-ITCDFAASG 344
Query: 328 ---WQHGLGIGNLMKSIT----IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW 380
W G + LMK + + T + D + G+R +F++E + + L W
Sbjct: 345 GRTWPMGRYLTRLMKGTSGVNNTNFRTSSLQFD-EDGQRITFNIEVYDPLDG--VGLAVW 401
Query: 381 NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL--- 437
+ + ++ K+ ++ R G PY N EL
Sbjct: 402 DPRGQITQLNVESKVQKKMIYRVATRI----------------GPPYFDYNQTAVELNLT 445
Query: 438 -----YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAI 492
GY+VDLI I+ E+ F Y FV + YG + T +WNG+IGE+ A + I
Sbjct: 446 GNALYEGYAVDLIDAISKEVGFEYVFVPVADQQYGKQDKDTKQWNGIIGEIINNDAHMGI 505
Query: 493 CDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGV 552
CDLTIT R+ AVDFT+PFM LG+SIL K + +L +FL P +VW+++ + V
Sbjct: 506 CDLTITQARKTAVDFTVPFMQLGVSILAFKKEHTEKELTAFLMPFGDEVWIWILISVFVV 565
Query: 553 SLLLFFLARIS 563
+ L +ARI+
Sbjct: 566 TFLKTIVARIA 576
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN ++Y+ + M + PS + K N EGV RV + +G Y F ME+T +EY E +C+L
Sbjct: 688 SNETVYRLAFTQMNNDDPSAYTKDNGEGVHRVQRNRGNYMFLMETTTLEYHKELHCNLRS 747
Query: 635 VGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETGELYGY 686
VG K Y IA+P F A++ ++ ++K E G+LY +
Sbjct: 748 VGEKFGEKHYAIAVP---FGAEYRSSLSEA---------ILKLSERGKLYDF 787
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
RL WW F +I+ +SYTANLAAFLTN++M I +++DL+ ++K+G + GST N
Sbjct: 625 RLFEATWWVFAIIIANSYTANLAAFLTNSKMEGSIGSLKDLSAQKKVKFGTIYGGSTYNL 684
Query: 819 F 819
Sbjct: 685 L 685
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI I+ E+ F Y FV + YG + T +
Sbjct: 429 GPPYFDYNQTAVELNLTGNALYEGYAVDLIDAISKEVGFEYVFVPVADQQYGKQDKDTKQ 488
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 489 WNGIIGEI 496
>gi|195173613|ref|XP_002027582.1| GL18376 [Drosophila persimilis]
gi|194114494|gb|EDW36537.1| GL18376 [Drosophila persimilis]
Length = 711
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 157/284 (55%), Gaps = 24/284 (8%)
Query: 289 VKIEAALMYDAVYLFAAALQSL----GERKPLPTPLSCENPSSWQHGLGIGNLMKSITID 344
++ E+ALM+D+VY FA L L G K LSC + +W GL + N + S ID
Sbjct: 8 IQTESALMFDSVYAFATGLHFLYLDDGSPKISVKNLSCTSDVTWDDGLSLYNYINSAAID 67
Query: 345 GMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIE 404
G+TG +N GRRN F ++ ++ ++ + +G W + G+N S D I
Sbjct: 68 GLTGNVNF--VEGRRNKFKIDILKLKHEKIQKVGYWESDMGVNISDPTAFYD----SNIA 121
Query: 405 NRTLTVTSKTFAKLRVLFQGEPYMMKNPETG-----ELYGYSVDLIKMIANELNFTYKFV 459
N TL V ++ + PY+M +T + G+ +DL+K IA ++ F YK
Sbjct: 122 NITLVVMTR---------EERPYVMVKEDTNLTGNVKFEGFCIDLLKAIAQQVGFQYKIE 172
Query: 460 LERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISIL 519
L +N YG P+T WNG++ EL E+RADLA+ +TI R + +DFT PFM LGI IL
Sbjct: 173 LVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGIL 232
Query: 520 YRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++ P + LFSF+ PL+ ++W+Y+ AY+ VS LF +AR S
Sbjct: 233 FKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFS 276
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 560 ARISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMES 619
A + GS L ++S + +YQ+M ME+ + +VFVK+ ++G++RV++ G YAF MES
Sbjct: 478 ALMQQGSDLY--PRDSKIGIYQKMWRYMENRKAAVFVKTYEDGIKRVME--GNYAFLMES 533
Query: 620 TGIEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
T ++Y V+++C+L Q+GGLLDSKGYGIA P S + K S +L+
Sbjct: 534 TMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 580
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETG-----ELYGY 686
+ +VG G I+ PT+ + + + + + + PY+M +T + G+
Sbjct: 95 IQKVGYWESDMGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDTNLTGNVKFEGF 153
Query: 687 SVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
+DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 154 CIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 199
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
T F+ G + + + Q FSF+ PL+ ++W Y+A Y+ VS+ ++ +AR+S
Sbjct: 307 TGTFLRQGSGLNPKISDRAQTKFFSFMNPLAIEIWFYIAFGYIFVSISIWIVARLS 362
>gi|440906259|gb|ELR56543.1| Glutamate receptor 4, partial [Bos grunniens mutus]
Length = 740
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 209/402 (51%), Gaps = 44/402 (10%)
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHT 238
+YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ +
Sbjct: 31 NYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KD 84
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEA 293
+ + F G AN+T ++++ P + +M+ W + L+ R +ET K +
Sbjct: 85 ISLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTS 136
Query: 294 ALMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMT 347
AL YD V + A +SL +K C NP++ W G+ + +K + I G+T
Sbjct: 137 ALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVQIQGLT 196
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
G + D GRR +++++ E S + +G WN L + V + + IENRT
Sbjct: 197 GNVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRT 254
Query: 408 LTVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLE 461
+ VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 255 VVVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIV 305
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +
Sbjct: 306 PDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIK 365
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 366 KPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 407
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 455 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 514
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 515 TKEFFR 520
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 520 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 579
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 580 TMKVGGNLDSKGYGVATPKGSSL 602
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 264 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 323
Query: 726 IGEL 729
+GEL
Sbjct: 324 VGEL 327
>gi|443716702|gb|ELU08093.1| hypothetical protein CAPTEDRAFT_148073 [Capitella teleta]
Length = 833
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 253/539 (46%), Gaps = 66/539 (12%)
Query: 62 SEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFW---DPNKYFIPTNGVHGVNVYPESH 118
S+GI A+FG + ++ S+ + F +P++ D N + P +++ P
Sbjct: 2 SKGIFAMFGMTNQSTLAMVTSLSRTFHMPYISPSTPTNDSNSWAPPAKHF-SLHMRP--- 57
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
L + + +I W+ +Y++ + L ++ + ++ I VT D
Sbjct: 58 LYDRAMIDVILKYRWNRIHYVYDSKEGLARIEALTAIITREEMNIDLDPVMVT------D 111
Query: 179 TDDYRPLLKEIK---NSSESHILLDCSM-DKTVTILKQAKEVHLMGDYQNYILSLTSYWI 234
+D LL+ + + I+LD + D ILKQ V + +Y+L +
Sbjct: 112 INDCYSLLRHMDGRMQDGDKFIVLDLTTKDDLEIILKQVLHVGMNRANYHYLLG----GL 167
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAA 294
+D +F+ G NIT R++NP P + W N + + ++AA
Sbjct: 168 AMDELDLAEFRHGGVNITGFRLMNPVLPRLEDAQRDW-GRLNPSFWTGAGSGSKLGLDAA 226
Query: 295 LMYDAVYLFAAALQSLGERKP-----------------LPTPLSCENPSSWQHGLGIGNL 337
L DAV + A L S+ E K + + P WQHG + N
Sbjct: 227 LTIDAVDVIAKGLDSIHESKSDIFREVFRRGKVYNNDTIGIKCKTDLPVPWQHGPMLMNK 286
Query: 338 MKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQW---KVLGTWNTAFGLNHSRTVEQ 394
KS+ DG+TGR+ D + R+N + L+ +E Q+ + + W++ GLNH
Sbjct: 287 FKSVFFDGVTGRVAFDERGFRKN-YQLDVLEL--GQYTPTRKVAEWSSDTGLNHQHPT-H 342
Query: 395 MDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGE----------LYGYSVDL 444
+ K K +N T VT+ +PY+M +T E GY DL
Sbjct: 343 VGKAPASKGKNLTKIVTT---------IMSKPYLMYRNKTDEDGTPLVGNDRFEGYCADL 393
Query: 445 IKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAA 504
+ IA+ + F Y + YG + + GKWNG++GEL + ADLAI LTI+S R
Sbjct: 394 AESIASIVGFDYILKPVADKKYGAKDGE-GKWNGMVGELTRKEADLAIAPLTISSIRERV 452
Query: 505 VDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+DF+ PFM+LGISI+ +KP K++P +FSF++PLS+++W+ + +Y+GVS++L+ ++R S
Sbjct: 453 IDFSKPFMSLGISIMIKKPEKQKPGVFSFMDPLSYEIWMCIVFSYIGVSIVLWLVSRFS 511
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 53/67 (79%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+VS R+V +WWFFTLI+ISSYTANLAAFLT RM PI++ +DLAK I+YG ++ G
Sbjct: 553 RSVSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIESADDLAKQTEIQYGTLDSG 612
Query: 814 STRNFFK 820
ST++FF+
Sbjct: 613 STKSFFE 619
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIE-YEVEKNCD 631
+ S + +Y+RM + M S VFV + GV+RV KGKYAF +EST + Y K C+
Sbjct: 619 ETSKIKVYERMWAFMSKSDSKVFVNDTEIGVKRVRDSKGKYAFLLESTMNDYYNQRKPCN 678
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LDSKGYGIA P
Sbjct: 679 TMKVGDNLDSKGYGIATP 696
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 661 FAKLRVLFQGEPYMMKNPETGE----------LYGYSVDLIKMIANELNFTYKFVLEREN 710
K+ +PY+M +T E GY DL + IA+ + F Y +
Sbjct: 354 LTKIVTTIMSKPYLMYRNKTDEDGTPLVGNDRFEGYCADLAESIASIVGFDYILKPVADK 413
Query: 711 TYGTLNPQTGKWNGLIGELQEQ 732
YG + + GKWNG++GEL +
Sbjct: 414 KYGAKDGE-GKWNGMVGELTRK 434
>gi|334349700|ref|XP_003342243.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like
[Monodelphis domestica]
Length = 1001
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 277/586 (47%), Gaps = 58/586 (9%)
Query: 17 AFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEGIAAIFG-PQSIE 75
A +A +IN + +P +E + ++ T MC +G+ ++ G S
Sbjct: 43 ALALAREQINGIIE-VPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPA 101
Query: 76 NRNIIESMCQMFDIPHVEAFWD--PNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDW 133
+ +I+ +C +IPH++ + P ++ V++YP + +S +S I+ ++
Sbjct: 102 SASIVSHICGEKEIPHIKVGPEETPRLQYLR---FASVSLYPSNEDVSLAVSRILKSFNY 158
Query: 134 DTFTIIYETHDNLVYLQQVLENAHDDD--KEIRPGRPSVTIRQLPPDTDDYRPLLKEIKN 191
+ ++I ++ Q+V E A D K R + LP + D L+ +
Sbjct: 159 PSASLICAKAESESQKQRV-EVAEIDLGWKNFLTIRAVLKWNWLPLEVVDSLS-LEVCQQ 216
Query: 192 SSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANI 251
H++ + V +QA E+ + + YIL+ + I + +NI
Sbjct: 217 KLNDHLM----GTERVLGQEQASELGMTSAFYKYILTTMDFPI----LHLDGIVEDSSNI 268
Query: 252 TTVRMINPTNP----HIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL 307
M N ++P +RS+ W EN A + AALM+DAV++ +A+
Sbjct: 269 LGFSMFNTSHPFYLEFVRSLNMSW--RENCEASMYPGPA----LSAALMFDAVHVVVSAV 322
Query: 308 QSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEF 366
+ L + + PL+C + + W HG + N ++ + DG+TGR+ +S+ G+R +++L
Sbjct: 323 RELNRSQEIGVKPLACTSSNIWPHGTSLMNYLRMVEYDGLTGRVEFNSK-GQRTNYTLRI 381
Query: 367 VEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQG 424
+E + + +G W N +N + +D + + N+TL VT+
Sbjct: 382 LEKSREGHREIGVWYSNRTLAMNST----TLDINLSQTLANKTLVVTT---------ILE 428
Query: 425 EPYMMKNPETGELY------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 478
PY+M+ P L G+ VD+++ +A L F ++ L + YG P G W G
Sbjct: 429 NPYVMRRPNFQSLSGNERFEGFCVDMLRELAELLRFRFRLRLVEDGLYGAPEPN-GSWTG 487
Query: 479 LIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLS 538
++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR ++P FSFL+P S
Sbjct: 488 MVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFS 547
Query: 539 FDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 548 PAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 588
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 673 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 729
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP 649
EY NC+L Q+GGLLD+KGYGI MP
Sbjct: 730 NEYHRRLNCNLTQIGGLLDTKGYGIGMP 757
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + GS
Sbjct: 618 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGS 677
Query: 815 TRNFFK 820
T FF+
Sbjct: 678 TMTFFQ 683
>gi|432105796|gb|ELK31985.1| Glutamate receptor 4 [Myotis davidii]
Length = 938
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 208/395 (52%), Gaps = 32/395 (8%)
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTV 239
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ + +
Sbjct: 183 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KDI 236
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEAA 294
+ F G AN+T ++++ P + +M+ W + L+ R +ET K +A
Sbjct: 237 SLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTSA 288
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTG 348
L YD V + A +SL +K C NP++ W G+ + +K + I G+TG
Sbjct: 289 LTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTG 348
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
+ D GRR +++++ E S + +G WN L + V + + IENRT+
Sbjct: 349 NVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRTV 406
Query: 409 TVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGT 468
VT+ V+F+ M + + E GY VDL IA + YK + + YG
Sbjct: 407 VVTT-IMESPYVMFKKNHEMFEGNDKYE--GYCVDLASEIAKHIGIKYKIAIVPDGKYGA 463
Query: 469 LNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
+ T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +KP K +P
Sbjct: 464 RDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKP 523
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 524 GVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 558
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 739 FFIYSILFF-IYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMN 790
F I++ L+F + F+ + ++S R+V G+WWFFTLI+ISSYTANLAAFLT RM
Sbjct: 582 FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMV 641
Query: 791 PPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
PI++ EDLAK I YG ++ GST+ FF+
Sbjct: 642 SPIESAEDLAKQTEIAYGTLDSGSTKEFFR 671
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 671 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 730
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 731 TMKVGGNLDSKGYGVATPKGSSL-RNAVNLAVLKLNEQGLLDKLKN 775
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 415 PYVMFKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 474
Query: 726 IGEL 729
+GEL
Sbjct: 475 VGEL 478
>gi|195119201|ref|XP_002004120.1| GI19094 [Drosophila mojavensis]
gi|193914695|gb|EDW13562.1| GI19094 [Drosophila mojavensis]
Length = 474
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 198/368 (53%), Gaps = 36/368 (9%)
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
+TIL+Q M +Y+ + TS+ + D +DF+ + NIT+ R+++ + ++
Sbjct: 18 ITILQQQ-----MNEYKFHYF-FTSF--DLENFDLEDFKYNFVNITSFRLVDMGDVAVKE 69
Query: 267 IMNGWIYEENERGRSLN------VRAETVKIEAALMYDAVYLFAAALQSLGERKPLPTPL 320
I+ Y N R + N +A +++ EAALM+DAVY+FA LQS+ LP L
Sbjct: 70 ILKDIEYH-NRRLLNHNESTYKSRKAVSIETEAALMFDAVYVFAIGLQSIYPLLKLPN-L 127
Query: 321 SCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTW 380
+C++ W GL + N + ++ G+TG I + G+R F L+ ++ +G W
Sbjct: 128 TCDDEVPWNGGLSLINYINAVEWKGLTGPIQF--KEGQRIQFKLDLIKLKQHSIVKVGEW 185
Query: 381 NTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM----KNPETGE 436
LN + D N TL V + PY+M KN E
Sbjct: 186 TPHNHLNITEPSLFFDAGSM----NVTLVV---------ITILETPYVMMRYGKNYTGNE 232
Query: 437 -LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDL 495
YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++ +L + +ADLA+ +
Sbjct: 233 RFYGFCVDILEHISHEVGFDYILDLVPDRKYGAKDPETGQWNGMVAQLMKYKADLAVGSM 292
Query: 496 TITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLL 555
TIT R + +DFT PFM LGISIL++ P + LFSF+ PL+ ++W+Y+ AY+ VSL
Sbjct: 293 TITYARESVIDFTKPFMNLGISILFKVPTAEPTRLFSFMNPLAIEIWIYVLVAYILVSLT 352
Query: 556 LFFLARIS 563
++ LA++S
Sbjct: 353 IYLLAKLS 360
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
A STR+++ +W FF+LI+++SYTANLAAFLT RM PI+N +DLA I YG +E GS
Sbjct: 405 ATSTRIISSIWGFFSLIIVASYTANLAAFLTVERMINPIENADDLASQTEISYGTLESGS 464
Query: 815 TRNFFKV 821
T FF+V
Sbjct: 465 TMTFFRV 471
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 616 FMESTGIEYEVE----KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGE 671
F E I+++++ K +++VG I P S F S + +
Sbjct: 159 FKEGQRIQFKLDLIKLKQHSIVKVGEWTPHNHLNITEP-SLFFDAGSMNVTLVVITILET 217
Query: 672 PYMM----KNPETGE-LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLI 726
PY+M KN E YG+ VD+++ I++E+ F Y L + YG +P+TG+WNG++
Sbjct: 218 PYVMMRYGKNYTGNERFYGFCVDILEHISHEVGFDYILDLVPDRKYGAKDPETGQWNGMV 277
Query: 727 GELQE 731
+L +
Sbjct: 278 AQLMK 282
>gi|55846804|gb|AAV67406.1| glutamate receptor ionotropic kainate 4 [Macaca fascicularis]
Length = 662
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 256/518 (49%), Gaps = 58/518 (11%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++
Sbjct: 34 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKFQFQRFTT 91
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+N + T +I + L+ L+++L ++ + ++
Sbjct: 92 LNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 144
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L DT D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 145 SVRMLD-DTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 203
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPHIR----SIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ + S+ W +EN +V
Sbjct: 204 EFSLQRMDSLVDD----RVNILGFSIFNQSHAFFQEFAQSLNQSW--QEN----CDHVPF 253
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 254 TGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 313
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N
Sbjct: 314 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDTLFN 370
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K +A L F YK L +
Sbjct: 371 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGV 427
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 428 YGV-------------------------PLTITAEREKVIDFSKPFMTLGISILYRVHMG 462
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
++P FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 463 RKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 500
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG
Sbjct: 541 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGT 600
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 601 IHGGSSMTFFQ 611
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 601 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVL--NSNYAFLLESTM 657
Query: 622 IEY 624
EY
Sbjct: 658 NEY 660
>gi|195470391|ref|XP_002087490.1| GE17232 [Drosophila yakuba]
gi|194173591|gb|EDW87202.1| GE17232 [Drosophila yakuba]
Length = 940
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 262/570 (45%), Gaps = 100/570 (17%)
Query: 40 PIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP 98
P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 62 PLIKRLKPEDGSVALQEQACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIE----- 116
Query: 99 NKYFIPTNGVHG--------VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVY-- 148
+ I G+ +N+YP ++SK + I+ + W FTI+Y+ D
Sbjct: 117 --FDISDEGIQAEKPNHQLTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDAKAAAR 174
Query: 149 LQQVLE--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
LQ +L+ H+D V +R+ D DD+R + K I+ E ++LDC
Sbjct: 175 LQDLLQLREVHND---------VVRVRKFQKD-DDFRVMWKSIR--GERRVVLDCEPSML 222
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
V +L + E L G Y + L+ + + D + N+T R++ +P S
Sbjct: 223 VDLLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNMTAARLLVTPDPPPYS 282
Query: 267 IMNGWI-------YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKP 315
+ G++ YE N+ R+L L++DA+ LFA + ++ +R
Sbjct: 283 LPYGYVTQRDSIVYESNDPPRTL---------LHDLIHDALQLFAQSWRNASFFYPDRMA 333
Query: 316 LPTPLSCENPSS----WQHGLGIGNLMKSITIDGMTGRINLDSQT--------GRRNSFS 363
+P ++C+ +S W G + LMK G +G N + +T G+R +F+
Sbjct: 334 VPR-ITCDFAASGGRTWAMGRYLARLMK-----GTSGVNNTNFRTSILQFDDDGQRITFN 387
Query: 364 LEFVEYVSDQWKVLG--TWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
+E V D +G W+ + ++ K+ ++ R
Sbjct: 388 IE----VYDPLDGIGMAIWDPRGQITQLNVDVKVQKKMIYRVATRI-------------- 429
Query: 422 FQGEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
G PY N EL GY+VDLI IA + F Y+FV + YG L+ +T
Sbjct: 430 --GPPYFSYNDTARELNLTGNALYQGYAVDLIDAIARYVGFEYEFVPVADQQYGKLDKET 487
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+WNG+IGE+ A + ICDLTIT R+ AVDFT+PFM LG+SIL K + L ++
Sbjct: 488 KQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLNAY 547
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L+P VW+++ + L +++L +ARIS
Sbjct: 548 LDPFGGKVWIWILISVLVMTILKTIVARIS 577
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 575 SNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQ 634
SN ++Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E+NCDL
Sbjct: 689 SNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDLRS 748
Query: 635 VGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L++ +GE Y +K
Sbjct: 749 VGEKFGEKHYAIAVP---FGAEYRSNLSVAILKLSERGELYDLK 789
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLT++ M I N++DL+ ++K+G + GST N
Sbjct: 626 RMFEATWWIFAIIIANSYTANLAAFLTSSNMKGSITNLKDLSGQKKVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI IA + F Y+FV + YG L+ +T +
Sbjct: 430 GPPYFSYNDTARELNLTGNALYQGYAVDLIDAIARYVGFEYEFVPVADQQYGKLDKETKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|332021791|gb|EGI62137.1| Glutamate receptor 1 [Acromyrmex echinatior]
Length = 1002
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 208/407 (51%), Gaps = 56/407 (13%)
Query: 193 SESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---LTSYWINAHTVDFQDFQPGY 248
S +++LDC D I+ ++V L +Y+LS + W + +++ G
Sbjct: 142 SNKYVVLDCPTDMAKDIVVSHVRDVALGKRTYHYLLSGLIMDDRW-ESEVIEY-----GA 195
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAAL- 307
NIT R+++ T PH++ + W + S E++ +AALMYDAV++ A
Sbjct: 196 INITGFRIVDATRPHVKDFLANW--HRQDPATSQGAGRESISAQAALMYDAVFVLVEAFN 253
Query: 308 --------------------QSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMT 347
Q++ KPL + + W+HG I L++ + I+G+T
Sbjct: 254 KHLRKRNDKNNMRRVTSTSNQTINGTKPLDCYHNRGWVTPWEHGDKISRLLRKVEIEGLT 313
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSRTVEQMDKEKKEKIE-N 405
G I + GRR +++L VE + V + W G + + + +IE N
Sbjct: 314 GEIRFNDD-GRRQNYTLHVVEMTVNSAMVKVAEWTDEAGFQP--IAAKYVRLRPHEIEKN 370
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYK 457
+T VT+ EP++M+ +TGE+ GY DL +IA +L +Y+
Sbjct: 371 KTYIVTT---------ILEEPFIMRKVSDTGEVLMGNDGYEGYCKDLADLIAKKLGISYE 421
Query: 458 FVLERENTYGTLNPQ-TGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGI 516
+ ++ +GT N +G W+G++GEL + AD+AI LTITSER +DF+ PFM+LGI
Sbjct: 422 LRIVKDRKHGTENQDVSGGWDGMVGELIRKEADIAIAPLTITSERERVIDFSKPFMSLGI 481
Query: 517 SILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
SI+ +KP K++P +FSFL PLS ++WV + +Y+ VS++LF ++R S
Sbjct: 482 SIMIKKPIKQKPGVFSFLNPLSKEIWVCVIFSYIAVSIVLFIVSRFS 528
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 740 FIYSILFFIYTFVNEA-------VSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPP 792
+ S+ F + F+ ++ +S R+ +WWFFTLI+I SYTANLAAFLT RM P
Sbjct: 576 IVNSLWFALAAFMQQSCDISPRSISGRIAGSVWWFFTLILICSYTANLAAFLTIERMVTP 635
Query: 793 IKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
I + EDLA ++YG + G+T +FF+
Sbjct: 636 INSPEDLAAQTEVQYGTILNGTTLDFFR 663
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S ++LY +M M S R VFV+S +EG+E+V KGKYAF +ES +Y E+ CD
Sbjct: 663 RKSQINLYNKMWEFMNSRR-DVFVQSYEEGIEKVRTSKGKYAFLLESPMNDYINEREPCD 721
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 722 TMKVGRNLDAKGFGVATP 739
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 671 EPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQ-TGK 721
EP++M+ +TGE+ GY DL +IA +L +Y+ + ++ +GT N +G
Sbjct: 381 EPFIMRKVSDTGEVLMGNDGYEGYCKDLADLIAKKLGISYELRIVKDRKHGTENQDVSGG 440
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 441 WDGMVGEL 448
>gi|281341163|gb|EFB16747.1| hypothetical protein PANDA_011365 [Ailuropoda melanoleuca]
Length = 740
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 44/401 (10%)
Query: 182 YRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTV 239
YR LL+E+ E ++DC +++ IL+Q V H+ G +YI++ + +
Sbjct: 32 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKG--YHYIIANLGF----KDI 85
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVR----AETV-KIEAA 294
+ F G AN+T ++++ P + +M+ W + L+ R +ET K +A
Sbjct: 86 SLERFIHGGANVTGFQLVDFNTPMVTKLMDRW--------KKLDQREYPGSETPPKYTSA 137
Query: 295 LMYDAVYLFAAALQSLGERK----PLPTPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTG 348
L YD V + A ++L +K C NP++ W G+ + +K + I G+TG
Sbjct: 138 LTYDGVLVMAETFRNLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTG 197
Query: 349 RINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTL 408
+ D GRR +++++ E S + +G WN L + V + + IENRT+
Sbjct: 198 NVQFD-HYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDVPTLGNDTA-AIENRTV 255
Query: 409 TVTSKTFAKLRVLFQGEPYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLER 462
VT+ PY+M KN E E GY VDL IA + YK +
Sbjct: 256 VVTT---------IMESPYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP 306
Query: 463 ENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
+ YG + T WNG++GEL +A++AI LTIT R +DF+ PFM+LGISI+ +K
Sbjct: 307 DGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKK 366
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P K +P +FSFL+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 367 PQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFS 407
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 455 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 514
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 515 TKEFFR 520
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 520 RRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 579
Query: 632 LMQVGGLLDSKGYGIAMPTSKFL 654
M+VGG LDSKGYG+A P L
Sbjct: 580 TMKVGGNLDSKGYGVATPKGSSL 602
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN E E GY VDL IA + YK + + YG + T WNG+
Sbjct: 264 PYVMYKKNHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGM 323
Query: 726 IGEL 729
+GEL
Sbjct: 324 VGEL 327
>gi|325120988|ref|NP_001191398.1| glutamate receptor subunit protein GluR3 precursor [Aplysia
californica]
gi|31074381|gb|AAP41205.1| glutamate receptor subunit protein GluR3 [Aplysia californica]
Length = 916
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 274/593 (46%), Gaps = 67/593 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN----KDFKALPPDIILEPIVQHVENYDSLHTAKL 56
+ I GIF + TAF V N K F+ L IL+ DS +
Sbjct: 27 VHIGGIFDRRSIQALTAFRHEVHIFNRAQAKRFRVLNDTSILDVT-------DSFAVSNA 79
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ S G AIFG + + I+S F +P+V N N + +Y
Sbjct: 80 LCHHLSSGNLAIFGVSNASSLATIQSYTDTFRVPYVTISTAQN---FSHNSSY--QLYMR 134
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
I+ + VI++ +W Y++ + LV LQQ+ + + + ++ +++
Sbjct: 135 PMYINAVVDVIMH-YEWKKVAFYYDSDEGLVRLQQLFQATNRYSSVL-----TIDTKRIT 188
Query: 177 PDTDDYRPLLKEIK---NSSESHILLDCSMDKT-VTILKQAKEVHLMGDYQNYILSLTSY 232
D + Y +LKE+ +LLD DK ILK + + +++L
Sbjct: 189 DDHNGYL-MLKELHLMDPDIHQRVLLDVRTDKAEKIILKVMNDTEINNSKFHFLLGD--- 244
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
+ ++ +F+ G +IT ++++P N + ++ W + + E + E
Sbjct: 245 -LGMLEINLTNFKIGGLDITGFQLVDPLNQTAKLFISTWSNLDPKFWPGAGT--EHLNYE 301
Query: 293 AALMYDAVYLFAAALQSLGERKP----------LPTPLSCENPSSWQHGLG--IGNLMKS 340
AAL D+V LF A SL + P + L C + S + G G I MK
Sbjct: 302 AALAADSVRLFTRAFGSLLHKNPGFLRRSRLAGIGKSLKCTDDSEVRTGYGEEILQEMKR 361
Query: 341 ITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGTWNTAFGLNHSRTVEQMDKEK 399
+ DG+TG + D + G+R F+L+ ++ + +G W+ G H + ++
Sbjct: 362 VRFDGITGHVEFD-EYGQRKDFTLDIYNVAMARRAAKVGFWSQREGRVHMQP-PRLVPNP 419
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE-------LYGYSVDLIKMIAN 450
+E ENRT ++ V EPY+M P+ GE L G+ +DL K +A
Sbjct: 420 EETNENRT---------RIVVTIIKEPYVMWKGAPKNGEPLVAVEHLEGFCIDLTKAVAE 470
Query: 451 ELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMP 510
++ F Y ++ +YG++ G W+G++GEL A +AI TIT++R +DFT P
Sbjct: 471 KVGFDYAIRFVKDGSYGSV-LSNGSWDGIVGELIAHEAHMAIAPFTITADRSRVIDFTKP 529
Query: 511 FMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FM+LGISI+ ++P FSF+EPLS+++W+ + AY+GVS++LF ++R S
Sbjct: 530 FMSLGISIMIKRPQPAGKHFFSFMEPLSYEIWMCIVFAYIGVSVVLFLVSRFS 582
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA+ I+YG + G
Sbjct: 622 RSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDLARQTDIQYGTIISG 681
Query: 814 STRNFFK 820
STR FF+
Sbjct: 682 STRAFFQ 688
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I SGS R +NS Y+RM + M S++P+VFV+ +++G+ RV GKYA+ EST
Sbjct: 678 IISGS-TRAFFQNSEFQTYKRMWAYMTSAQPNVFVQKHEDGIARVRDSGGKYAYLTESTT 736
Query: 622 IEY-EVEKNCDLMQVGGLLDSKGYGIAMPTSKFLA-KFSFGFAKLR 665
IEY K CD ++VG L+S G+GI P L K +F +LR
Sbjct: 737 IEYVSSRKPCDTLKVGNNLNSDGFGIGTPLGSDLKNKLNFAVLELR 782
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 671 EPYMM--KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
EPY+M P+ GE L G+ +DL K +A ++ F Y ++ +YG++ G
Sbjct: 436 EPYVMWKGAPKNGEPLVAVEHLEGFCIDLTKAVAEKVGFDYAIRFVKDGSYGSV-LSNGS 494
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 495 WDGIVGEL 502
>gi|307184662|gb|EFN70991.1| Glutamate receptor 1 [Camponotus floridanus]
Length = 879
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 214/422 (50%), Gaps = 62/422 (14%)
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTIL-KQAKEVHLMGDYQNYILS---LTSYWINA 236
D+ L+E+ S +++LDC D I+ +++ L +Y+LS + W +
Sbjct: 6 DFLRSLEELNRWSNKYVVLDCPTDMAKDIVVSHVRDIALGKRTYHYLLSGLIMDDRW-ES 64
Query: 237 HTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEE---NERGRSLNVRAETVKIEA 293
++F G NIT R+++ T PH++ + GW ++ ++ GR E++ +A
Sbjct: 65 EVIEF-----GAINITGFRIVDVTRPHVKDFLAGWHRQDPAISQAGR------ESISAQA 113
Query: 294 ALMYDAVYLFAAALQSLGERKP-------LPTP-----------LSCENP----SSWQHG 331
ALMYDAV++ A ++ + TP L C N + W+HG
Sbjct: 114 ALMYDAVFVLVEAFNKFLRKRTDKNNTRRIGTPSSNQPINGTKTLDCYNNRGWVTPWEHG 173
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSR 390
I ++ + I+G+TG I + GRR +++L VE + V + W G +
Sbjct: 174 DKISKFLRKVEIEGLTGEIRFNDD-GRRQNYTLHVVEMTVNSAMVKVAEWTDETGF-QAI 231
Query: 391 TVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN-PETGELY-------GYSV 442
+ + E +N+T VT+ +PY+M+ +TGE+ GY
Sbjct: 232 AAKYVRLRPHEVEKNKTYIVTT---------IMDDPYIMRKISDTGEVLVGNDSYEGYCK 282
Query: 443 DLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSER 501
DL +IA L +Y+ + ++ YG N G W+G++GEL + AD+AI +TITS+R
Sbjct: 283 DLADLIAKRLGISYELRIVKDGKYGEENQDVPGGWDGMVGELIRKEADIAIAPITITSDR 342
Query: 502 RAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLAR 561
+DF+ PFM+LGISI+ +KP K++ +FSFL PLS ++WV + +Y+ VS++LF ++R
Sbjct: 343 ERVIDFSKPFMSLGISIMIKKPIKQKSGVFSFLNPLSKEIWVCVIFSYIAVSIVLFIVSR 402
Query: 562 IS 563
S
Sbjct: 403 FS 404
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 741 IYSILFFIYTFVNE-------AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPI 793
+ S+ F + F+ + ++S R+ +WWFFTLI+I SYTANLAAFLT RM PI
Sbjct: 453 VNSLWFALAAFMQQGCDISPRSISGRIAGSVWWFFTLILICSYTANLAAFLTIERMVTPI 512
Query: 794 KNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+ EDLA ++YG + G+T +FF+
Sbjct: 513 NSPEDLAAQTDVQYGTLAHGATMDFFR 539
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKN-CD 631
+ S +SLY +M M +SR VFVKS +EG+ RV KGKYAF +ES +Y E+ CD
Sbjct: 539 RKSQISLYSKMWEFM-NSRKHVFVKSYEEGIRRVRTSKGKYAFLIESPMNDYTNEREPCD 597
Query: 632 LMQVGGLLDSKGYGIAMP 649
M+VG LD+KG+G+A P
Sbjct: 598 TMKVGRNLDAKGFGVATP 615
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 671 EPYMMKN-PETGELY-------GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
+PY+M+ +TGE+ GY DL +IA L +Y+ + ++ YG N G
Sbjct: 257 DPYIMRKISDTGEVLVGNDSYEGYCKDLADLIAKRLGISYELRIVKDGKYGEENQDVPGG 316
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 317 WDGMVGEL 324
>gi|325296747|ref|NP_001191609.1| glutamate receptor 2 [Aplysia californica]
gi|77812628|gb|ABB03888.1| glutamate receptor 2 [Aplysia californica]
Length = 898
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 274/593 (46%), Gaps = 67/593 (11%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRIN----KDFKALPPDIILEPIVQHVENYDSLHTAKL 56
+ I GIF + TAF V N K F+ L IL+ DS +
Sbjct: 10 VHIGGIFDRRSIQALTAFRHEVHIFNRAQAKRFRVLNDTSILDVT-------DSFAVSNA 62
Query: 57 MCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPE 116
+C+ S G AIFG + + I+S F +P+V N N + +Y
Sbjct: 63 LCHHLSSGNLAIFGVSNASSLATIQSYTDTFRVPYVTISTAQN---FSHNSSY--QLYMR 117
Query: 117 SHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
I+ + VI++ +W Y++ + LV LQQ+ + + + ++ +++
Sbjct: 118 PMYINAVVDVIMH-YEWKKVAFYYDSDEGLVRLQQLFQATNRYSSVL-----TIDTKRIT 171
Query: 177 PDTDDYRPLLKEIK---NSSESHILLDCSMDKT-VTILKQAKEVHLMGDYQNYILSLTSY 232
D + Y +LKE+ +LLD DK ILK + + +++L
Sbjct: 172 DDHNGYL-MLKELHLMDPDIHQRVLLDVRTDKAEKIILKVMNDTEINNSKFHFLLGD--- 227
Query: 233 WINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIE 292
+ ++ +F+ G +IT ++++P N + ++ W + + E + E
Sbjct: 228 -LGMLEINLTNFKIGGLDITGFQLVDPLNQTAKLFISTWSNLDPKFWPGAGT--EHLNYE 284
Query: 293 AALMYDAVYLFAAALQSLGERKP----------LPTPLSCENPSSWQHGLG--IGNLMKS 340
AAL D+V LF A SL + P + L C + S + G G I MK
Sbjct: 285 AALAADSVRLFTRAFGSLLHKNPGFLRRSRLAGIGKSLKCTDDSEVRTGYGEEILQEMKR 344
Query: 341 ITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGTWNTAFGLNHSRTVEQMDKEK 399
+ DG+TG + D + G+R F+L+ ++ + +G W+ G H + ++
Sbjct: 345 VRFDGITGHVEFD-EYGQRKDFTLDIYNVAMARRAAKVGFWSQREGRVHMQP-PRLVPNP 402
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMM--KNPETGE-------LYGYSVDLIKMIAN 450
+E ENRT ++ V EPY+M P+ GE L G+ +DL K +A
Sbjct: 403 EETNENRT---------RIVVTIIKEPYVMWKGAPKNGEPLVAVEHLEGFCIDLTKAVAE 453
Query: 451 ELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMP 510
++ F Y ++ +YG++ G W+G++GEL A +AI TIT++R +DFT P
Sbjct: 454 KVGFDYAIRFVKDGSYGSV-LSNGSWDGIVGELIAHEAHMAIAPFTITADRSRVIDFTKP 512
Query: 511 FMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FM+LGISI+ ++P FSF++PLS+++W+ + AY+GVS++LF ++R S
Sbjct: 513 FMSLGISIMIKRPQPAGKHFFSFMDPLSYEIWMCIVXAYIGVSVVLFLVSRFS 565
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA+ I+YG + G
Sbjct: 605 RSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDLARQTDIQYGTIISG 664
Query: 814 STRNFFK 820
STR FF+
Sbjct: 665 STRAFFQ 671
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I SGS R +NS Y+RM + M S++P+VFV+ +++G+ RV GKYA+ EST
Sbjct: 661 IISGS-TRAFFQNSEFQTYKRMWAYMTSAQPNVFVQKHEDGIARVRDSGGKYAYLTESTT 719
Query: 622 IEY-EVEKNCDLMQVGGLLDSKGYGIAMPTSKFLA-KFSFGFAKLR 665
IEY K CD ++VG L+S G+GI P L K +F +LR
Sbjct: 720 IEYVSSRKPCDTLKVGNNLNSDGFGIGTPLGSDLKNKLNFAVFELR 765
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 671 EPYMM--KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
EPY+M P+ GE L G+ +DL K +A ++ F Y ++ +YG++ G
Sbjct: 419 EPYVMWKGAPKNGEPLVAVEHLEGFCIDLTKAVAEKVGFDYAIRFVKDGSYGSV-LSNGS 477
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 478 WDGIVGEL 485
>gi|358254688|dbj|GAA56160.1| glutamate receptor ionotropic kainate 2, partial [Clonorchis
sinensis]
Length = 1284
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 249/536 (46%), Gaps = 81/536 (15%)
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C + AI+GP + ++S+ F IPH++ W Y + G +NV+P
Sbjct: 216 CRLLERQVIAIYGPNTPNAMESVQSLANQFGIPHLQIDWG---YRQSSRGF-SLNVHPHY 271
Query: 118 HLISKGISVIINDMD-WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLP 176
+ + + + WDT +IY ++L +L N V +R+
Sbjct: 272 LAYGQALYDYVRKAEYWDTVALIYYKEESLYKYDYLLRNFDQ----------PVMLRKWD 321
Query: 177 PDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINA 236
D+Y+ ++K+ K ++++H +I+ + + +
Sbjct: 322 MVNDNYKYVIKQFK-TTQTHF--------------------------RFIVDIPFWEVQE 354
Query: 237 H-TVDFQDFQPGY------ANITTVRMINPTNPH---IRSIMNG--WIYEENERGRSLNV 284
+ D Q P ANITT ++ P I ++++ ++ER
Sbjct: 355 FLSTDIQLVDPSAFKVVQGANITTFSILRPLGEEGYGIVALLDDIRLALLQDERFARTTT 414
Query: 285 RAETVKIEAALMYDAVYLFAAALQSLGERKPL--PTPLSCENPSSWQHGLGIGNLMKSI- 341
++AL+YD + L A L + + + PT L+C W GL + N +++I
Sbjct: 415 SRRISPTQSALLYDGLSLLAMGLLASSKTVDISPPTGLTCSGTRGWNPGLSLMNDIRAIR 474
Query: 342 --TIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEK 399
G+TG D G R++ +L +E+ ++ ++ G WN GL +R Q+ +E
Sbjct: 475 PENFRGLTGTFQFDGH-GWRSNINLHILEHGAEGFRQFGYWNMEEGLTVTRNFSQILQEM 533
Query: 400 KEKIENRTLTVTSKTFAKLRVLFQGEPYMM----------KNPETGELYGYSVDLIKMIA 449
+ +++ + L +T+K + +PYMM K+ + + G+ +DL+ I
Sbjct: 534 QTELKGKVLRITTK---------EEKPYMMYKGNVSSGEPKSTDPKDWRGFCIDLLNEIG 584
Query: 450 NELNFTYKFVLERENTYGTLNPQTGK--WNGLIGELQEQRADLAICDLTITSERRAAVDF 507
ELNFTY L ++TYG G+ W+G++ EL+ ++ADLA+ TIT +R +DF
Sbjct: 585 KELNFTYTINLVPDSTYGNAKIIDGEEVWDGMVQELRTRKADLAVGSFTITYDRERVIDF 644
Query: 508 TMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
T PFM LGISI+Y++ K+ LFSFL+PLS VW Y+ A + VSL+LF +AR S
Sbjct: 645 TTPFMYLGISIIYKRIEDKEASLFSFLQPLSAPVWGYILAATIMVSLVLFVVARFS 700
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 752 VNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVE 811
V A+STR++AG WWFFTLI+ISSYTANLAA+LT RM PI+N EDLAK +IKYG +
Sbjct: 742 VPHAMSTRIIAGFWWFFTLIVISSYTANLAAYLTVARMESPIENAEDLAKQTKIKYGTTQ 801
Query: 812 MGSTRNFFK 820
GST FF+
Sbjct: 802 GGSTAAFFQ 810
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
++S +Y+RM M SS+ V + S ++ + RV +E+ YAF +EST EY +++C+L
Sbjct: 810 QHSKFPVYKRMWQFM-SSQKGVLMNSTEDAIRRVKREE--YAFILESTMNEYYTQRDCEL 866
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
+QVGGLLDSKGYGI +P SK+ S KL+
Sbjct: 867 IQVGGLLDSKGYGIGLPEGSKYRDPISETILKLQ 900
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 664 LRVLFQGE-PYMM----------KNPETGELYGYSVDLIKMIANELNFTYKFVLERENTY 712
LR+ + E PYMM K+ + + G+ +DL+ I ELNFTY L ++TY
Sbjct: 542 LRITTKEEKPYMMYKGNVSSGEPKSTDPKDWRGFCIDLLNEIGKELNFTYTINLVPDSTY 601
Query: 713 GTLNPQTGK--WNGLIGELQ 730
G G+ W+G++ EL+
Sbjct: 602 GNAKIIDGEEVWDGMVQELR 621
>gi|326914426|ref|XP_003203526.1| PREDICTED: glutamate receptor 4-like, partial [Meleagris gallopavo]
Length = 739
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 224/437 (51%), Gaps = 56/437 (12%)
Query: 149 LQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVT 208
LQ ++E A + ++ ++ + + YR LL+++ E ++DC +++
Sbjct: 4 LQAIMEKAGQNSWQV----SAICVENF--NDASYRRLLEDLDRRQEKKFVIDCEIERLQN 57
Query: 209 ILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
+L+Q V H+ G +YI++ + + + F G AN+T ++++ + P +
Sbjct: 58 LLEQIVSVGKHVKG--YHYIVANLGF----KDISLERFMHGGANVTGFQLVDFSTPMVTK 111
Query: 267 IMNGWIYEENERGRSLNVR----AETV-KIEAALMYDAVYLFAAALQSLGERK----PLP 317
+M W + L+ R +ET K +AL YD V + A ++L +K
Sbjct: 112 LMQRW--------KKLDQREYPGSETPPKYTSALTYDGVLVMAETFRNLRRQKIDISRRG 163
Query: 318 TPLSC-ENPSS-WQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWK 375
C NP++ W G+ + +K + I G+TG + D GRR +++++ E + +
Sbjct: 164 NAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD-HYGRRVNYTMDVFELKNTGPR 222
Query: 376 VLGTWNTAFGL---NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMM--K 430
+G WN L H T+ +ENRT+ VT+ A PY+M K
Sbjct: 223 KVGYWNDMDKLVLIQHEPTL----GNDTSAMENRTVVVTTILEA---------PYVMFKK 269
Query: 431 NPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 486
N +T E GY VDL IA + YK + + YG +P+T WNG++GEL
Sbjct: 270 NHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGMVGELVYG 329
Query: 487 RADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMA 546
+A++A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+PL++++W+ +
Sbjct: 330 KAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIV 389
Query: 547 TAYLGVSLLLFFLARIS 563
AY+GVS++LF ++R S
Sbjct: 390 FAYIGVSVVLFLVSRFS 406
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I YG ++ GS
Sbjct: 454 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGS 513
Query: 815 TRNFFK 820
T+ FF+
Sbjct: 514 TKEFFR 519
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S +++Y++M + M+S+ PSVF ++ EGV RV K KGK+AF +EST EY E K CD
Sbjct: 519 RRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCD 578
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKN 677
M+VGG LDSKGYG+A P L + + A L++ QG +KN
Sbjct: 579 TMKVGGNLDSKGYGVATPKGSPL-RNAVNLAVLKLNEQGLLDKLKN 623
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPETGE----LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN +T E GY VDL IA + YK + + YG +P+T WNG+
Sbjct: 263 PYVMFKKNHDTFEGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM 322
Query: 726 IGEL 729
+GEL
Sbjct: 323 VGEL 326
>gi|195575659|ref|XP_002077694.1| GD23060 [Drosophila simulans]
gi|194189703|gb|EDX03279.1| GD23060 [Drosophila simulans]
Length = 940
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 264/570 (46%), Gaps = 100/570 (17%)
Query: 40 PIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP 98
P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 62 PLIKRLKPEDGSVTMQEQACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIE----- 116
Query: 99 NKYFIPTNGVHG--------VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVY-- 148
+ I G+ +N+YP ++SK + I+ + W FTI+Y+ D
Sbjct: 117 --FDISDEGIQAEKPNHQLTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAAR 174
Query: 149 LQQVLE--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
LQ +L+ H+D V +R+ D DD+R + K I+ E ++LDC
Sbjct: 175 LQDLLQLREVHND---------VVRVRKFQKD-DDFRVMWKSIR--GERRVVLDCEPSML 222
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
V +L + E L G Y + L+ + + D + NIT R++ +P S
Sbjct: 223 VDLLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYS 282
Query: 267 IMNGWI-------YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKP 315
+ G++ YE N+ R+L L++DA+ LFA + ++ +R
Sbjct: 283 LPYGYVTQRDSIVYESNDPPRTL---------LHDLIHDALQLFAQSWRNASFFYPDRMV 333
Query: 316 LPTPLSCENPSS----WQHGLGIGNLMKSITIDGMTGRINLDSQT--------GRRNSFS 363
+P ++C+ +S W G + LMK G +G N + +T G+R +F+
Sbjct: 334 VPR-ITCDFAASGGRTWAMGRYLARLMK-----GTSGVNNTNFRTSILQFDEDGQRITFN 387
Query: 364 LEFVEYVSDQWKVLGT--WNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
+E V D +G W+ + T +D + ++K+ R T R+
Sbjct: 388 IE----VYDPLDGIGIAIWDPRGQI----TQLNVDVKAQKKMIYRVAT---------RI- 429
Query: 422 FQGEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
G PY N EL GY+VDLI IA + F Y FV + YG L+ +T
Sbjct: 430 --GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKET 487
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+WNG+IGE+ A + ICDLTIT R+ AVDFT+PFM LG+SIL K + L ++
Sbjct: 488 KQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAY 547
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L P +VW+++ + ++ L +ARIS
Sbjct: 548 LAPFGGEVWIWILISVFVMTFLKTIVARIS 577
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN ++Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E+NCDL
Sbjct: 688 DSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDLR 747
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L++ +GE Y +K
Sbjct: 748 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILKLSERGELYDLK 789
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLT+++M I N++DL+ ++K+G + GST N
Sbjct: 626 RMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSITNLKDLSAQKKVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI IA + F Y FV + YG L+ +T +
Sbjct: 430 GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|195350233|ref|XP_002041645.1| GM16780 [Drosophila sechellia]
gi|194123418|gb|EDW45461.1| GM16780 [Drosophila sechellia]
Length = 940
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 264/570 (46%), Gaps = 100/570 (17%)
Query: 40 PIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP 98
P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 62 PLIKRLKPEDGSVTMQEQACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIE----- 116
Query: 99 NKYFIPTNGVHG--------VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVY-- 148
+ I G+ +N+YP ++SK + I+ + W FTI+Y+ D+
Sbjct: 117 --FDISDEGIQAEKPNHQLTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDDRAAAR 174
Query: 149 LQQVLE--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
LQ +L+ H+D V +R+ D DD+R + K I+ E ++LDC
Sbjct: 175 LQDLLQLREVHND---------VVRVRKFQKD-DDFRVMWKSIR--GERRVVLDCEPSML 222
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
V +L + E L G Y + L+ + + D + NIT R++ +P S
Sbjct: 223 VELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYS 282
Query: 267 IMNGWI-------YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKP 315
+ G++ YE N+ R+L L++DA+ LFA + ++ +R
Sbjct: 283 LPYGYVTQRDSIVYESNDPPRTL---------LHDLIHDALQLFAQSWRNASFFYPDRMA 333
Query: 316 LPTPLSCENPSS----WQHGLGIGNLMKSITIDGMTGRINLDSQT--------GRRNSFS 363
+P ++C+ +S W G + LMK G +G N + +T G+R +F+
Sbjct: 334 VPR-ITCDFAASGGRTWAMGRYLARLMK-----GTSGVNNTNFRTSILQFDEDGQRITFN 387
Query: 364 LEFVEYVSDQWKVLGT--WNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
+E V D +G W+ + T +D + ++K+ R T R+
Sbjct: 388 IE----VYDPLDGIGIAIWDPRGQI----TQLNVDVKAQKKMIYRVAT---------RI- 429
Query: 422 FQGEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
G PY N EL GY+VDLI IA F Y FV + YG L+ +T
Sbjct: 430 --GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHAGFEYVFVPVADQQYGKLDKET 487
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+WNG+IGE+ A + ICDLTIT R+ AVDFT+PFM LG+SIL K + L ++
Sbjct: 488 KQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAY 547
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L P +VW+++ + ++ L +ARIS
Sbjct: 548 LAPFGGEVWIWILISVFVMTFLKTIVARIS 577
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN ++Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E++CDL
Sbjct: 688 DSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQSCDLR 747
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L++ +GE Y +K
Sbjct: 748 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILKLSERGELYDLK 789
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLT+++M I N++ L+ ++K+G + GST N
Sbjct: 626 RMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKALSAQKKVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI IA F Y FV + YG L+ +T +
Sbjct: 430 GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHAGFEYVFVPVADQQYGKLDKETKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|198477202|ref|XP_002136711.1| GA27978 [Drosophila pseudoobscura pseudoobscura]
gi|198145014|gb|EDY71726.1| GA27978 [Drosophila pseudoobscura pseudoobscura]
Length = 476
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 238/497 (47%), Gaps = 48/497 (9%)
Query: 1 MKIVGIFGPNEEE--VATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMC 58
+++ IF +E E + +AF+ A+ RIN++ K+L P+ L +++V DS T K +C
Sbjct: 12 IRLGAIFTEDERESSIESAFKYAIYRINRE-KSLLPNTQLIYDIEYVPRDDSFRTTKKVC 70
Query: 59 NATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESH 118
G+ AIFGP ++S+C+ +DIPH+E D + VN+YP +
Sbjct: 71 RQLEAGVQAIFGPTDPLLAGHVQSICEAYDIPHIEVRIDLEM----NSKEFSVNLYPSHN 126
Query: 119 LISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPD 178
+++ ++ ++W IIYE L L H ++ + + IRQ P+
Sbjct: 127 VLTLAYRDLMVYLNWTKVAIIYEEDYGLFNLM------HSSNE----MKTEMYIRQASPE 176
Query: 179 TDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHT 238
T YR +L+ I+ I++D S + ++ M D++ + + T + T
Sbjct: 177 T--YRQVLRAIRQKEIYKIIVDTSPSNIKKFFRSILQLQ-MNDHRYHYMFTT---FDLET 230
Query: 239 VDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYD 298
D +DF+ NIT R+++ + +++ + + G + ++ E+ALM+D
Sbjct: 231 YDLEDFRYNSVNITAFRLVDVGSKRYLEVIDQ-MQKLQHNGLDMINGIPYIQTESALMFD 289
Query: 299 AVYLFAAALQSL----GERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDS 354
+VY FA L L G K LSC + +W GL + N + S IDG+TG +N
Sbjct: 290 SVYAFATGLHFLYLDDGSPKISVKNLSCTSDVTWDDGLSLYNYINSAAIDGLTGNVNF-- 347
Query: 355 QTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKT 414
GRRN F ++ ++ ++ + +G W + G+N S D I N TL V ++
Sbjct: 348 VEGRRNKFKIDILKLKHEKIQKVGYWESDMGVNISDPTAFYDS----NIANITLVVMTR- 402
Query: 415 FAKLRVLFQGEPYMMKNPETG-----ELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
+ PY+M +T + G+ +DL+K IA ++ F YK L +N YG
Sbjct: 403 --------EERPYVMVKEDTNLTGNVKFEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVY 454
Query: 470 NPQTGKWNGLIGELQEQ 486
P+T WNG++ EL E+
Sbjct: 455 IPETNSWNGIVQELMER 471
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 628 KNCDLMQVGGLLDSKGYGIAMPTSKFLAKFSFGFAKLRVLFQGEPYMMKNPETG-----E 682
K+ + +VG G I+ PT+ + + + + + + PY+M +T +
Sbjct: 363 KHEKIQKVGYWESDMGVNISDPTAFYDSNIA-NITLVVMTREERPYVMVKEDTNLTGNVK 421
Query: 683 LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQ 732
G+ +DL+K IA ++ F YK L +N YG P+T WNG++ EL E+
Sbjct: 422 FEGFCIDLLKAIAQQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMER 471
>gi|121438|sp|P26591.1|GLRK_LYMST RecName: Full=Glutamate receptor; Flags: Precursor
gi|9629|emb|CAA42683.1| glutamate receptor subunit [Lymnaea stagnalis]
Length = 917
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 161/606 (26%), Positives = 262/606 (43%), Gaps = 95/606 (15%)
Query: 3 IVGIFGPNEEEVATAFEIAVRRINKDFK-----ALPPDIILEPIVQHVENYDSLHTAKLM 57
I GIF + TAF + N+ + L D + + DS + +
Sbjct: 26 IGGIFDSRSVQALTAFRHEIHMFNRAYSHVYRYKLKNDTTILDVT------DSFAVSNAL 79
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S G AIFG + + I+S F++P V N NG + +Y
Sbjct: 80 CHHLSRGDLAIFGVSNASSLATIQSYTDTFNVPFVTISMAQNN---SHNGSY--QIYMRP 134
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I+ + VI++ W+ Y++ + LV LQQ+ + + DK I S+ +++
Sbjct: 135 MYINALVDVIVH-YRWEKVAFYYDSDEGLVRLQQLFQATNKYDKMI----ISIDTKRITS 189
Query: 178 DTDDYRPLLKEIK---NSSESHILLDCSMDKTVTIL---------KQAKEVHLMGDYQNY 225
+ Y +LKE+ E +LLD DK I+ AK L+GD
Sbjct: 190 VENGYH-MLKELHLMDPEMEHRVLLDVRTDKAEQIILKVMNDSKINNAKFHFLLGD---- 244
Query: 226 ILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN-- 283
+ ++ F+ G NIT ++++P N ++ W SL+
Sbjct: 245 --------LGMLEINTTHFKIGGVNITGFQLVDPFNSTSELFISTW--------SSLDPV 288
Query: 284 ----VRAETVKIEAALMYDAVYLFAAALQSLGERKP----------LPTPLSCENPSSWQ 329
V EAAL D+V LF +A S+ ++ P + C + S +
Sbjct: 289 YWPGAGTNHVNYEAALAADSVRLFKSAFGSILQKDPNFLRRSRSGTAGKSMKCTDDSEIK 348
Query: 330 --HGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGL 386
HG I MK + +G+TG + + Q G R F+L + +G WN G
Sbjct: 349 TGHGQMILEEMKKVKFEGVTGHVAFNEQ-GHRKDFTLGVYNVAMTRGTAKIGYWNEREGK 407
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN-------PETGE--L 437
H+ + R +T K EPY+M N P G +
Sbjct: 408 LHAHNPRLFQNNSSDMNRTRIVTTIIK-----------EPYVMVNNVIRDGKPLVGNEPV 456
Query: 438 YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTI 497
G+ +DL K +A ++ F + ++ +YG++ G W+G++GEL AD+AI TI
Sbjct: 457 EGFCIDLTKAVAEKVGFDFVIQFVKDGSYGSV-LSNGTWDGIVGELIRHEADMAIAPFTI 515
Query: 498 TSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLF 557
T++R +DFT PFM+LGISI+ ++P FSF+EPLS ++W+ + AY+GVS++LF
Sbjct: 516 TADRSRVIDFTKPFMSLGISIMIKRPQPAGKHFFSFMEPLSSEIWMCIVFAYIGVSVVLF 575
Query: 558 FLARIS 563
++R S
Sbjct: 576 LVSRFS 581
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA+ I+YG + G
Sbjct: 622 RSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDLARQTEIQYGTIMSG 681
Query: 814 STRNFFK 820
ST+ FFK
Sbjct: 682 STKAFFK 688
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
KNS YQRM + M S++PSVFVK+++EG++RV + GKYA+ ES+ I+Y K CD
Sbjct: 688 KNSQFQTYQRMWAYMTSAQPSVFVKTHEEGIQRVRQSNGKYAYLTESSTIDYVSNRKPCD 747
Query: 632 LMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++VG L+S G+GI P S K +F +LR
Sbjct: 748 TLKVGSNLNSDGFGIGTPVGSDLRDKLNFSVLELR 782
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 671 EPYMMKN-------PETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
EPY+M N P G + G+ +DL K +A ++ F + ++ +YG++ G
Sbjct: 435 EPYVMVNNVIRDGKPLVGNEPVEGFCIDLTKAVAEKVGFDFVIQFVKDGSYGSV-LSNGT 493
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 494 WDGIVGEL 501
>gi|195171876|ref|XP_002026728.1| GL13273 [Drosophila persimilis]
gi|194111662|gb|EDW33705.1| GL13273 [Drosophila persimilis]
Length = 915
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 271/615 (44%), Gaps = 135/615 (21%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
IF ++V +AF+ A+ +N + L+ V + D+ ++L+CN S G
Sbjct: 10 AIFEQGTDDVQSAFKYAM--LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRG 67
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLISKGI 124
+ ++ G S ++ + + S F +P V + +PE
Sbjct: 68 VYSMLGAVSPDSFDTLHSYSNTFQMPFVTPW------------------FPEKQ------ 103
Query: 125 SVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD---- 180
IY+ E++PG + ++ + +
Sbjct: 104 --------------IYQ--------------------ELKPGNETFRVQMVKRIANVTMA 129
Query: 181 -DYRPLLKEIKNSSESHILLDC--SMDKTVTILKQAKEVHLMGDYQNYILS---LTSYWI 234
++ L+++ S+ I+LDC M K + I++ +++ L +Y+LS + ++W
Sbjct: 130 IEFLHTLEDLGRFSKKRIVLDCPAEMAKEI-IVQHVRDIKLGRRTYHYLLSGLVMDNHWP 188
Query: 235 NAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAET---VKI 291
+ D +F G NIT R+++ +R + E + +
Sbjct: 189 S----DVAEF--GAINITGFRIVDTNRRAVRDFHDSRKRLEPSGSGLGAAGGNSLPAISA 242
Query: 292 EAALMYDAVYLFAAALQSLGERKP-------------------------LPTPLSCENP- 325
+AALMYDAV++ A + +KP L C
Sbjct: 243 QAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGGSSSSSGTNESSALLDCNTSK 302
Query: 326 ---SSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEY-VSDQWKVLGTWN 381
+ W+ G I +++ + IDG++G I D + GRR +++L VE V+ + + W
Sbjct: 303 GWVTPWEQGEKISRVLRKVEIDGLSGEIRFD-EDGRRINYTLHVVEMSVNSSLQQVAEWR 361
Query: 382 TAFGLN--HSRTVEQMDKEKK----EKIENRTLTVTSKTFAKLRVLFQGEPYMM-KNPET 434
GL HSR+ + + +N T VTS VL EPY+M K P
Sbjct: 362 DDVGLLPLHSRSYATSSRSASANSGDYSKNHTYIVTS-------VL--EEPYLMHKQPHY 412
Query: 435 GE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQ 486
GE GY DL M+AN+L Y+ L ++ YG+ N G W+G++GEL +
Sbjct: 413 GEELVGNDRFEGYCKDLADMLANQLGIRYELRLVQDGNYGSENQYAPGGWDGMVGELVRK 472
Query: 487 RADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMA 546
AD+AI +TIT+ER +DF+ PFMTLGISI+ +KP K+ P +FSFL PLS ++W+ +
Sbjct: 473 EADIAIAAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEIWMSVI 532
Query: 547 TAYLGVSLLLFFLAR 561
+YLGVS++L+F+ R
Sbjct: 533 FSYLGVSIVLYFVTR 547
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 740 FIYSILFFIYTFVN---EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNV 796
F YS+ F+ + +++ R+ A +WWFFT+I+ISSYTANLAAFLT RM PIK+
Sbjct: 598 FWYSLAAFMQQGCDLTPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVSPIKSP 657
Query: 797 EDLAKAGRIKYGCVEMGSTRNFFK 820
EDLA ++YG + G+T +FF+
Sbjct: 658 EDLAMQTDVQYGTLLHGATWDFFQ 681
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
+ S + L+++M M S+ P + V + EG+ RV KGKYA +ES EY CD
Sbjct: 687 QRSQIELHKKMWDYMNSN-PHLSVHAYDEGIRRVRTSKGKYALLVESPKNEYVNARSPCD 745
Query: 632 LMQVGGLLDSKGYGIAMPTSKFLAK 656
M+VG +D+KG+G+A P + K
Sbjct: 746 TMKVGRNIDAKGFGVATPIGSPIRK 770
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 671 EPYMM-KNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY+M K P GE GY DL M+AN+L Y+ L ++ YG+ N G
Sbjct: 402 EPYLMHKQPHYGEELVGNDRFEGYCKDLADMLANQLGIRYELRLVQDGNYGSENQYAPGG 461
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 462 WDGMVGEL 469
>gi|395520110|ref|XP_003764180.1| PREDICTED: glutamate receptor, ionotropic kainate 4 [Sarcophilus
harrisii]
Length = 953
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 264/514 (51%), Gaps = 40/514 (7%)
Query: 53 TAKLMCNATSEGIAAIFGPQSIENRNIIE-SMCQMFDIPHVEAFWDPNKYF-IPTNGVHG 110
TA+ MC +G+ A+ GP S + I ++C ++PH + P ++ + +
Sbjct: 79 TAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKV--APEEFVKLQSQRFTT 136
Query: 111 VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSV 170
+N++P + IS ++ I+ + T +I + L+ L+++L ++ + ++
Sbjct: 137 LNLHPSNTDISVAVAGILRFFNCTTACLICAKAECLLNLEKLL-------RQFLISKDTL 189
Query: 171 TIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLT 230
++R L D+ D PLLKEI++ + I++ + + TIL +A E+ ++ Y YI +
Sbjct: 190 SVRMLD-DSRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNL 248
Query: 231 SYWINAHTVDFQDFQPGYANITTVRMINPTNPH----IRSIMNGWIYEENERGRSLNVRA 286
+ + D NI + N ++ ++S+ W +EN +V
Sbjct: 249 EFSLQRMDSLLDD----RVNILGFSIFNQSHAFFQEFVQSLNQSW--QEN----CDHVPF 298
Query: 287 ETVKIEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDG 345
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G
Sbjct: 299 TGPALSSALLFDAVYTVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEG 358
Query: 346 MTGRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIEN 405
+TG I +S+ G+R++++L+ +++ + ++ +G W+ + GL+ + + + + N
Sbjct: 359 LTGHIEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVSEGLSMDNHLSSSNI--SDSLFN 415
Query: 406 RTLTVTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENT 465
TL VT+ ++ +G M+ + E G+ VD++K ++ L F YK L +
Sbjct: 416 TTLVVTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELSEILRFNYKIRLVGDGV 472
Query: 466 YGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPA 524
YG P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR
Sbjct: 473 YGV--PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 525 KKQPDLF--SFLEPLSFDVWVYMATAYLGVSLLL 556
+ DLF FL P + + M A+ SL+L
Sbjct: 531 VR--DLFYKHFLNPFTPPECLLMFLAFAASSLIL 562
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 677 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 733
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 734 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSIFRDEFDLAILQLQ 778
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 704 FVLERENTYGTLNPQ---TGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRL 760
F L R Y +P G+ N L+ Q + + F + + T A+STR
Sbjct: 570 FCLHRLTPYEWYSPHPCAQGRCNLLVN--QYSLGNSLWFPVGGFMQQGSTIAPRALSTRC 627
Query: 761 VAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
V+G+WW FTLI+ISSYTANLAAFLT RM+ PI++V+DLA I+YG + GS+ FF+
Sbjct: 628 VSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQ 687
>gi|239628|gb|AAB20422.1| glutamate receptor subunit [Lymnaea stagnalis=pond snail, Peptide,
917 aa]
gi|228242|prf||1801239A Glu receptor
Length = 917
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 161/606 (26%), Positives = 262/606 (43%), Gaps = 95/606 (15%)
Query: 3 IVGIFGPNEEEVATAFEIAVRRINKDFK-----ALPPDIILEPIVQHVENYDSLHTAKLM 57
I GIF + TAF + N+ + L D + + DS + +
Sbjct: 26 IGGIFDSRSVQALTAFRHEIHMFNRAYSHVYRYKLKNDTTILDVT------DSFAVSNAL 79
Query: 58 CNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPES 117
C+ S G AIFG + + I+S F++P V N NG + +Y
Sbjct: 80 CHHLSRGDLAIFGVSNASSLATIQSYTDTFNVPFVTISMAQNN---SHNGSY--QIYMRP 134
Query: 118 HLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPP 177
I+ + VI++ W+ Y++ + LV LQQ+ + + DK I S+ +++
Sbjct: 135 MYINALVDVIVH-YRWEKVAFYYDSDEGLVRLQQLFQATNKYDKMI----ISIDTKRITS 189
Query: 178 DTDDYRPLLKEIK---NSSESHILLDCSMDKTVTIL---------KQAKEVHLMGDYQNY 225
+ Y +LKE+ E +LLD DK I+ AK L+GD
Sbjct: 190 VENGYH-MLKELHLMDPEMEHRVLLDVRTDKAEQIILKVMNDSKINNAKFHFLLGD---- 244
Query: 226 ILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLN-- 283
+ ++ F+ G NIT ++++P N ++ W SL+
Sbjct: 245 --------LGMLEINTTHFKIGGVNITGFQLVDPFNSTSELFISTW--------SSLDPV 288
Query: 284 ----VRAETVKIEAALMYDAVYLFAAALQSLGERKP----------LPTPLSCENPSSWQ 329
V EAAL D+V LF +A S+ ++ P + C + S +
Sbjct: 289 YWPGAGTNHVNYEAALAADSVRLFKSAFGSILQKDPNFLRRSRSGTAGKSMKCTDDSEIK 348
Query: 330 --HGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGL 386
HG I MK + +G+TG + + Q G R F+L + +G WN G
Sbjct: 349 TGHGQMILEEMKKVEFEGVTGHVAFNEQ-GHRKDFTLGVYNVAMTRGTAKIGYWNEREGK 407
Query: 387 NHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN-------PETGE--L 437
H+ + R +T K EPY+M N P G +
Sbjct: 408 LHAHNPRLFQNNSSDMNRTRIVTTIIK-----------EPYVMVNNVIRDGKPLVGNEPV 456
Query: 438 YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTI 497
G+ +DL K +A ++ F + ++ +YG++ G W+G++GEL AD+AI TI
Sbjct: 457 EGFCIDLTKAVAEKVGFDFVIQFVKDGSYGSV-LSNGTWDGIVGELIRHEADMAIAPFTI 515
Query: 498 TSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLF 557
T++R +DFT PFM+LGISI+ ++P FSF+EPLS ++W+ + AY+GVS++LF
Sbjct: 516 TADRSRVIDFTKPFMSLGISIMIKRPQPAGKHFFSFMEPLSSEIWMCIVFAYIGVSVVLF 575
Query: 558 FLARIS 563
++R S
Sbjct: 576 LVSRFS 581
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++S R+V +WWFFTLI+ISSYTANLAAFLT RM PI + EDLA+ I+YG + G
Sbjct: 622 RSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDLARQTEIQYGTIMSG 681
Query: 814 STRNFFK 820
ST+ FFK
Sbjct: 682 STKAFFK 688
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-EVEKNCD 631
KNS YQRM + M S++PSVFVK+++EG++RV + GKYA+ ES+ I+Y K CD
Sbjct: 688 KNSQFQTYQRMWAYMTSAQPSVFVKTHEEGIQRVRQSNGKYAYLTESSTIDYVSNRKPCD 747
Query: 632 LMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
++VG L+S G+GI P S K +F +LR
Sbjct: 748 TLKVGSNLNSDGFGIGTPVGSDLRDKLNFAVLELR 782
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 671 EPYMMKN-------PETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
EPY+M N P G + G+ +DL K +A ++ F + ++ +YG++ G
Sbjct: 435 EPYVMVNNVIRDGKPLVGNEPVEGFCIDLTKAVAEKVGFDFVIQFVKDGSYGSV-LSNGT 493
Query: 722 WNGLIGEL 729
W+G++GEL
Sbjct: 494 WDGIVGEL 501
>gi|442625086|ref|NP_608557.4| glutamate receptor IIC [Drosophila melanogaster]
gi|440213104|gb|AAF51433.4| glutamate receptor IIC [Drosophila melanogaster]
Length = 940
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 265/570 (46%), Gaps = 100/570 (17%)
Query: 40 PIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP 98
P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 62 PLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIE----- 116
Query: 99 NKYFIPTNGVHG--------VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVY-- 148
+ I G+ +N+YP ++SK + I+ + W FTI+Y+ D
Sbjct: 117 --FDISDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAAR 174
Query: 149 LQQVLE--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
LQ +L+ H+D V +R+ D DD+R + K I+ E ++LDC +
Sbjct: 175 LQDLLQLREVHND---------VVRVRKFHKD-DDFRVMWKSIR--GERRVVLDCEPNML 222
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
V +L + E L G Y + L+ + + D + NIT R++ +P S
Sbjct: 223 VELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYS 282
Query: 267 IMNGWI-------YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKP 315
+ G++ YE ++ R+L L++DA+ LFA + ++ +R
Sbjct: 283 LPYGYVTQRDNIVYESSDPPRTL---------IHDLIHDALQLFAQSWRNASFFYPDRMV 333
Query: 316 LPTPLSCENPSS----WQHGLGIGNLMKSITIDGMTGRINLDSQT--------GRRNSFS 363
+P ++C+ +S W G + LMK G +G N + +T G+R +F+
Sbjct: 334 VPR-ITCDFAASGGRTWAMGRYLARLMK-----GTSGVNNTNFRTSILQFDEDGQRITFN 387
Query: 364 LEFVEYVSDQWKVLGT--WNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
+E V D +G W+ + T +D + ++K+ R T R+
Sbjct: 388 IE----VYDPLDGIGIAIWDPRGQI----TQLNVDVKAQKKMIYRVAT---------RI- 429
Query: 422 FQGEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
G PY N EL GY+VDLI IA + F Y FV + YG L+ +T
Sbjct: 430 --GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKET 487
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+WNG+IGE+ A + ICDLTIT R+ AVDFT+PFM LG+SIL K + L ++
Sbjct: 488 KQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAY 547
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L P +VW+++ + ++ L +ARIS
Sbjct: 548 LAPFGGEVWIWILISVFVMTFLKTIVARIS 577
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN ++Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E+NCDL
Sbjct: 688 DSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDLR 747
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L++ +GE Y +K
Sbjct: 748 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILKLSERGELYDLK 789
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLT+++M I N++DL+ ++K+G + GST N
Sbjct: 626 RMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNL 685
Query: 819 F 819
Sbjct: 686 L 686
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI IA + F Y FV + YG L+ +T +
Sbjct: 430 GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQ 489
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 490 WNGIIGEI 497
>gi|47227095|emb|CAG00457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 707
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 153/282 (54%), Gaps = 19/282 (6%)
Query: 288 TVKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMT 347
++ +AALMYDAV++ A A Q + + L C W+ G NL K DG+T
Sbjct: 58 ALQTDAALMYDAVFMVAVASQRATQMTV--SSLQCHRHKPWRFGPRFMNLFKEAQWDGLT 115
Query: 348 GRINLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRT 407
GRI L+ G R F L+ + D + WN+ G+N + ++ + + + NRT
Sbjct: 116 GRIVLNKTDGLRRDFDLDIISLKEDGTARIAVWNSYKGMNLTDNRDK-NNNVTDSLANRT 174
Query: 408 LTVTSKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLE 461
L VT+ PY+M EL G Y +DL+K ++N L FTY+ L
Sbjct: 175 LIVTT---------ILENPYVMYKKSDKELVGNDRFEGYCLDLLKELSNILGFTYEVRLV 225
Query: 462 RENTYGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYR 521
+ YG N + G+WNG++ EL + ADLA+ LTIT R +DF+ PFMTLGISILYR
Sbjct: 226 ADGKYGAQNDK-GEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFMTLGISILYR 284
Query: 522 KPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
KP P +FSFL PLS D+W+Y+ A GVS +LF +AR +
Sbjct: 285 KPNGTNPGVFSFLNPLSPDIWMYVLLACTGVSCVLFVIARFT 326
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK RI+YG V G
Sbjct: 370 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMDAPIDSADDLAKQTRIEYGAVRDG 429
Query: 814 STRNFFK 820
ST FFK
Sbjct: 430 STMTFFK 436
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG+ RV+ YA MEST IEY ++NC+L
Sbjct: 436 KKSKISTYEKMWTFMSSRKNTALVKNNQEGITRVLTTD--YAMLMESTSIEYISQRNCNL 493
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 494 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 536
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M EL G Y +DL+K ++N L FTY+ L + YG N + G+WNG+
Sbjct: 184 PYVMYKKSDKELVGNDRFEGYCLDLLKELSNILGFTYEVRLVADGKYGAQNDK-GEWNGM 242
Query: 726 IGELQEQV 733
+ EL + V
Sbjct: 243 VRELIDHV 250
>gi|189181849|gb|ACD81701.1| GH22844p [Drosophila melanogaster]
Length = 973
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 265/570 (46%), Gaps = 100/570 (17%)
Query: 40 PIVQHVENYD-SLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDP 98
P+++ ++ D S+ + C+ G+AAIFGP S +I+ +C IPH+E
Sbjct: 95 PLIKRLKPEDGSVTMQEHACDLIDNGVAAIFGPSSKAASDIVALVCNSTGIPHIE----- 149
Query: 99 NKYFIPTNGVHG--------VNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVY-- 148
+ I G+ +N+YP ++SK + I+ + W FTI+Y+ D
Sbjct: 150 --FDISDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAAR 207
Query: 149 LQQVLE--NAHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNSSESHILLDCSMDKT 206
LQ +L+ H+D V +R+ D DD+R + K I+ E ++LDC +
Sbjct: 208 LQDLLQLREVHND---------VVRVRKFHKD-DDFRVMWKSIR--GERRVVLDCEPNML 255
Query: 207 VTILKQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRS 266
V +L + E L G Y + L+ + + D + NIT R++ +P S
Sbjct: 256 VELLNSSTEFGLTGQYNHIFLTNLETYTDHLEELAADNETFAVNITAARLLVNPDPPPYS 315
Query: 267 IMNGWI-------YEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQSLG----ERKP 315
+ G++ YE ++ R+L L++DA+ LFA + ++ +R
Sbjct: 316 LPYGYVTQRDNIVYESSDPPRTL---------IHDLIHDALQLFAQSWRNASFFYPDRMV 366
Query: 316 LPTPLSCENPSS----WQHGLGIGNLMKSITIDGMTGRINLDSQT--------GRRNSFS 363
+P ++C+ +S W G + LMK G +G N + +T G+R +F+
Sbjct: 367 VPR-ITCDFAASGGRTWAMGRYLARLMK-----GTSGVNNTNFRTSILQFDEDGQRITFN 420
Query: 364 LEFVEYVSDQWKVLGT--WNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVL 421
+E V D +G W+ + T +D + ++K+ R T R+
Sbjct: 421 IE----VYDPLDGIGIAIWDPRGQI----TQLNVDVKAQKKMIYRVAT---------RI- 462
Query: 422 FQGEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT 473
G PY N EL GY+VDLI IA + F Y FV + YG L+ +T
Sbjct: 463 --GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKET 520
Query: 474 GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSF 533
+WNG+IGE+ A + ICDLTIT R+ AVDFT+PFM LG+SIL K + L ++
Sbjct: 521 KQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAY 580
Query: 534 LEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
L P +VW+++ + ++ L +ARIS
Sbjct: 581 LAPFGGEVWIWILISVFVMTFLKTIVARIS 610
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLM 633
+SN ++Y+ + M + PS + K N EGV+RV K +G Y F ME+T +EY E+NCDL
Sbjct: 721 DSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDLR 780
Query: 634 QVGGLLDSKGYGIAMPTSKFLAKF--SFGFAKLRVLFQGEPYMMK 676
VG K Y IA+P F A++ + A L++ +GE Y +K
Sbjct: 781 SVGEKFGEKHYAIAVP---FGAEYRSNLSVAILKLSERGELYDLK 822
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 759 RLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNF 818
R+ WW F +I+ +SYTANLAAFLT+++M I N++DL+ ++K+G + GST N
Sbjct: 659 RMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGSTYNL 718
Query: 819 F 819
Sbjct: 719 L 719
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 670 GEPYMMKNPETGEL--------YGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
G PY N EL GY+VDLI IA + F Y FV + YG L+ +T +
Sbjct: 463 GPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQ 522
Query: 722 WNGLIGEL 729
WNG+IGE+
Sbjct: 523 WNGIIGEI 530
>gi|395751265|ref|XP_003780664.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 5 [Pongo abelii]
Length = 1020
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 212/419 (50%), Gaps = 47/419 (11%)
Query: 178 DTDDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAH 237
D+ D PLLKEI++ S I++D + + IL + + G ++ + + + H
Sbjct: 4 DSRDPTPLLKEIRDDKVSTIIIDANASISHLILHKESK----GGFKTFFFHKDDNYSHLH 59
Query: 238 TVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETV---KIEAA 294
+D ++ + M N ++P + + N R N A T ++ AA
Sbjct: 60 LTVLED-----SSTFWLSMFNTSHPXYPEL-----SQLNMSXRE-NCEASTYPGPQLSAA 108
Query: 295 LMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLD 353
LM+DAV++ +A++ L + + PL+C + + W HG + N ++ + DG+TGR+ +
Sbjct: 109 LMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFN 168
Query: 354 SQTGRRNSFSLEFVEYVSDQWKVLGTW--NTAFGLNHSRTVEQMDKEKKEKIENRTLTVT 411
S+ G+R +++L +E + +G W N +N + +D + + N+TL VT
Sbjct: 169 SK-GQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNAT----TLDINLSQTLANKTLVVT 223
Query: 412 SKTFAKLRVLFQGEPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENT 465
+ PY+M+ P L G + VD+++ +A L F Y+ L +
Sbjct: 224 T---------ILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGL 274
Query: 466 YGTLNPQTGKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAK 525
YG P G W G++GEL ++ADLA+ TIT+ER +DF+ PFMTLGISILYR
Sbjct: 275 YGAPEPN-GSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMG 333
Query: 526 KQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARISSGSRLRYSAKNSNVSLYQRMH 584
++P FSFL+P S VW++M AYL VS +LF AR+S Y N + L R H
Sbjct: 334 RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP-----YEWYNPHPCLRARPH 387
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I +GS + + +NS YQRM + M+S +PSVFVKS +EG+ RV+ + YAF +EST
Sbjct: 472 IHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAFLLESTM 528
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAKFSFGFAKLR 665
EY NC+L Q+GGLLD+KGYGI MP S F + + +L+
Sbjct: 529 NEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ 573
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
A+STR V+G+WW FTLI+ISSYTANLAAFLT RM P+++ +DLA I+YG + G
Sbjct: 416 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAG 475
Query: 814 STRNFFK 820
ST FF+
Sbjct: 476 STMTFFQ 482
>gi|405945758|gb|EKC17462.1| Glutamate receptor, ionotropic kainate 1 [Crassostrea gigas]
Length = 388
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 197/373 (52%), Gaps = 23/373 (6%)
Query: 5 GIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNATSEG 64
G F P + AF+ +++IN L +++ IV+ V DS +K +C + G
Sbjct: 11 GFFEPEHKSAELAFKWTMQKINLHNDILS-QVLVAYIVKEVPPDDSFDVSKKVCREIAAG 69
Query: 65 IAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFI----PTNGVHGVNVYPESHLI 120
IFGP + + + ++SMC+ IPH++A WDP P +N+YP +
Sbjct: 70 CKVIFGPGTRVSSSHVQSMCKFLAIPHIQAHWDPRDVITDTKDPDKDHFSLNLYPYYLSL 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
S +I+ W FT+IYE +D L+ LQ+VL+ ++ + + VT+R++ + +
Sbjct: 130 STAFRNLIDYWKWTQFTVIYEDNDGLIRLQEVLKVSNLPETK-------VTVRKINDNPE 182
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
Y L K++K E I++DC + + I+++A +V+ + +Y +Y+ + ++ V+
Sbjct: 183 SYISLFKDLKERGEYRIIIDCHVSRVGIIMEKALQVNAVSEYFHYLFTT----LDLGLVE 238
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYE---ENERGRSLNVRAETVKIEAALMY 297
+ F+ ANIT +R+++P P + ++M W YE + R L + + E ALMY
Sbjct: 239 LEQFKHAGANITGMRLVDPERPLVSAVMGEWKYEMFSSSSRTSPL-IDQTGIPTETALMY 297
Query: 298 DAVYLFAAALQSLGERKPL--PTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQ 355
DAVYLFA L + K + + C + +SW+ G+ + N MK++ +G+TGRI+ +
Sbjct: 298 DAVYLFARGLHGVQNAKNMNFRQSIMCNSSTSWEDGISLLNYMKTMDFEGLTGRIHF-GK 356
Query: 356 TGRRNSFSLEFVE 368
G R+ F+L+ +
Sbjct: 357 YGERSDFTLDITK 369
>gi|354500029|ref|XP_003512105.1| PREDICTED: glutamate receptor, ionotropic kainate 4, partial
[Cricetulus griseus]
Length = 708
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 165/275 (60%), Gaps = 10/275 (3%)
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G+TG
Sbjct: 55 LSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGH 114
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N TL
Sbjct: 115 IEFNSK-GQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSRL--YASNISDSLFNTTLV 171
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ ++ +G M+ + E G+ VD++K +A L F YK L + YG
Sbjct: 172 VTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGVYGV- 227
Query: 470 NPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR ++P
Sbjct: 228 -PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRP 286
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 287 GYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 321
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 422 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 478
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 479 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 523
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 362 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 421
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 422 IHGGSSMTFFQ 432
>gi|325296749|ref|NP_001191610.1| glutamate receptor 1 precursor [Aplysia californica]
gi|77812626|gb|ABB03887.1| glutamate receptor 1 [Aplysia californica]
Length = 906
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 255/561 (45%), Gaps = 75/561 (13%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHV--EAF 95
LE V ++ DS + ++ +C+ S G I G + + + IP +
Sbjct: 62 LETQVHRLDTSDSYNVSRALCSLLSGGAVTIIGDIRPQALDTVIDYADDTQIPFIFLNNP 121
Query: 96 WDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLEN 155
DP ++ ++ + VY E L + ++ W F IY+ D++ ++Q +
Sbjct: 122 ADPKRW---SDDRRSMQVYMEPSLTKAIVGMVYTWYRWRRFYYIYDQLDSITRIEQTHDF 178
Query: 156 AHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNS--SESHILLDCSMDKT---VTIL 210
H+ ++ R P V ++ R LL +N+ + ++LD + T +T L
Sbjct: 179 LHEFPRDYRYATPDVQPHRVDGAHQCLRLLLDIFENNRGEDVRVVLDIPPEDTQWVITQL 238
Query: 211 KQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNG 270
+ K++H + + +I+ +++ ++ + F G NIT
Sbjct: 239 VEDKDIHKIRFH--FIIP----YLSLRSIFLESFITGGVNITG----------------- 275
Query: 271 WIYEENERGRSLNVRAE---TVKIEAALMYDAVYLFAAALQSLGERK------------P 315
+E E G+SL R + T+K+ + D L +L L +
Sbjct: 276 --FEIFEEGKSLQYRRKNPNTIKVRDHIAADTAQLLEQSLMMLQRHQGSASVFGNVNGWQ 333
Query: 316 LPTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
L ++C + W++G + + ++ T G +G + DS TG+R S+E E +
Sbjct: 334 LSQEMTCLPQLRWRWRYGRALAKVFQNTTFHGRSGYVQFDS-TGQRTELSVEVQEVTMYR 392
Query: 374 -WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN- 431
++GTW+ H EQ+ + I+NRT VTS EPY+MK
Sbjct: 393 GLTIVGTWDKDGFQAHGE--EQVLDKANRTIDNRTRIVTS---------IDEEPYLMKVV 441
Query: 432 ------PETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
P TG GY DL +++A + + Y ++ YG P G WNG+IGEL
Sbjct: 442 APIQGLPVTGRHRFEGYCSDLAELVAENVGYDYHIRFVKDGEYGKKEPD-GTWNGVIGEL 500
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
AD+AI LTITS+R +DFT PFM+LGIS++ +KP P +FSF++PLS ++W+
Sbjct: 501 TRHEADIAIAPLTITSDREKVLDFTKPFMSLGISLMIKKPVDTDPHVFSFMQPLSREIWL 560
Query: 544 YMATAYLGVSLLLFFLARISS 564
A++GVS++LF ++R SS
Sbjct: 561 CTVFAFIGVSVVLFLVSRFSS 581
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++VS R+V +WWFFTLI+ISSYTANLAAFLT RM+ I++ EDL K IKYG G
Sbjct: 619 KSVSGRIVTSVWWFFTLIIISSYTANLAAFLTTMRMSGSIRSAEDLVKQTEIKYGPYRGG 678
Query: 814 STRNFF 819
ST FF
Sbjct: 679 STYMFF 684
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEK-NCDL 632
+ VSLYQRM S M +S+P VFV++N +G++RV GKY F +EST EY + C+
Sbjct: 686 QTTVSLYQRMWSFM-TSQPDVFVENNDKGIDRVRDSHGKYVFLIESTLNEYYSSRYPCNT 744
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
M+ G L+SKGYGIA P S K + +LR
Sbjct: 745 MKAGSNLNSKGYGIATPMGSDIRDKLTLAILQLR 778
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 671 EPYMMKN-------PETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
EPY+MK P TG GY DL +++A + + Y ++ YG P G
Sbjct: 434 EPYLMKVVAPIQGLPVTGRHRFEGYCSDLAELVAENVGYDYHIRFVKDGEYGKKEPD-GT 492
Query: 722 WNGLIGEL 729
WNG+IGEL
Sbjct: 493 WNGVIGEL 500
>gi|148693597|gb|EDL25544.1| glutamate receptor, ionotropic, kainate 4, isoform CRA_b [Mus
musculus]
Length = 783
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 165/275 (60%), Gaps = 10/275 (3%)
Query: 291 IEAALMYDAVYLFAAALQSLGERKPLPT-PLSCENPSSWQHGLGIGNLMKSITIDGMTGR 349
+ +AL++DAVY A+Q L + + PLSC + WQHG + N ++ + ++G+TG
Sbjct: 130 LSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGH 189
Query: 350 INLDSQTGRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLT 409
I +S+ G+R++++L+ +++ + ++ +G W+ A GL+ + + + N TL
Sbjct: 190 IEFNSK-GQRSNYALKILQFTRNGFQQIGQWHVAEGLSMDSRL--YASNISDSLFNTTLV 246
Query: 410 VTSKTFAKLRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTL 469
VT+ ++ +G M+ + E G+ VD++K +A L F YK L + YG
Sbjct: 247 VTT-ILENPYLMLKGNHQEMEGNDRYE--GFCVDMLKELAEILRFNYKIRLVGDGVYGV- 302
Query: 470 NPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQP 528
P+ G W G++GEL ++ADLA+ LTIT+ER +DF+ PFMTLGISILYR ++P
Sbjct: 303 -PEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRP 361
Query: 529 DLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
FSFL+P S VW++M AYL VS +LF +AR++
Sbjct: 362 GYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLT 396
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 562 ISSGSRLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTG 621
I GS + + +NS YQRM + M S +PSVFVKS +EG+ RV+ YAF +EST
Sbjct: 497 IHGGSSMTF-FQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSN--YAFLLESTM 553
Query: 622 IEYEVEKNCDLMQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
EY ++NC+L Q+GGLLD+KGYGI MP S F +F +L+
Sbjct: 554 NEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQ 598
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 750 TFVNEAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGC 809
T A+STR V+G+WW FTLI+ISSYTANLAAFLT RM PI++V+DLA I+YG
Sbjct: 437 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGT 496
Query: 810 VEMGSTRNFFK 820
+ GS+ FF+
Sbjct: 497 IHGGSSMTFFQ 507
>gi|47221075|emb|CAG12769.1| unnamed protein product [Tetraodon nigroviridis]
Length = 653
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 190/401 (47%), Gaps = 75/401 (18%)
Query: 218 LMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENE 277
+M +Y ++ + ++ +D + ++ N+T R++N NP + S++ W E +
Sbjct: 3 MMTEYYHFFFTT----LDLFALDLEPYRYSGVNMTGFRLLNIDNPQVASVVEKWAMERLQ 58
Query: 278 RGRSLNVRAET------VKIEAALMYDAVYLFAAALQSLGERKPLPTPLSCENPSSWQHG 331
+AE+ + EAALMYDAVY+ AAA Q + + L C W+ G
Sbjct: 59 APS----KAESGMMEGMMTTEAALMYDAVYMVAAASQRASQITV--SSLQCHRHKPWRFG 112
Query: 332 LGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSD------QWKVL-------- 377
N++K +G+TG+I ++ G R F L+ + D W L
Sbjct: 113 SRFMNMLKDAQWNGLTGQIIVNKTDGLRKEFDLDVISLKEDGLEKVKTWVSLVTSSFCPP 172
Query: 378 --GTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETG 435
G WN+ GLN + T + + + NRTL VT+ PY+M
Sbjct: 173 QIGVWNSQTGLNLTETNKDSSTNVTDSMANRTLIVTT---------ILENPYVMYKKSDK 223
Query: 436 ELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQE---- 485
LYG Y +DL+K ++N L F+Y+ L + YG N + G+WNG++ EL +
Sbjct: 224 PLYGNDRFEGYCLDLLKELSNILGFSYEVKLVSDGKYGAQNDK-GEWNGMVRELIDHVST 282
Query: 486 -----------------------QRADLAICDLTITSERRAAVDFTMPFMTLGISILYRK 522
Q ADLA+ LTIT R +DF+ PFMTLGISILY K
Sbjct: 283 SLGWNCRRRFGRSSESDLCPLLCQVADLAVAPLTITYVREKVIDFSKPFMTLGISILYHK 342
Query: 523 PAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
P P +FSFL PLS D+W+Y+ A LGVS +LF +AR +
Sbjct: 343 PNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 383
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%)
Query: 704 FVLERENTYGTLNPQTGKWNGLIGELQEQVDTFILFFIYSILFFIYTFVNEAVSTRLVAG 763
FV+ R Y NP + + E + + F + +++ + +A+STR+V G
Sbjct: 377 FVIARFTPYEWYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGG 436
Query: 764 MWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGSTRNFFK 820
+WWFFTLI+ISSYTANLAAFLT RM+ PI + +DLAK +I+YG V GST FFK
Sbjct: 437 IWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDGSTMTFFK 493
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 573 KNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDL 632
K S +S Y++M + M S + + VK+N+EG++RV+ YA MEST IEY ++NC+L
Sbjct: 493 KKSKISTYEKMWAFMSSRKNTALVKNNREGIQRVLTTD--YALLMESTSIEYISQRNCNL 550
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLRVLFQGEPYMMK 676
Q+GGL+DSKGYG+ P S + K + +L+ +G+ +MMK
Sbjct: 551 TQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE--EGKLHMMK 593
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 672 PYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M LYG Y +DL+K ++N L F+Y+ L + YG N + G+WNG+
Sbjct: 214 PYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFSYEVKLVSDGKYGAQNDK-GEWNGM 272
Query: 726 IGELQEQVDT 735
+ EL + V T
Sbjct: 273 VRELIDHVST 282
>gi|31074383|gb|AAP41206.1| glutamate receptor subunit protein GluR4 [Aplysia californica]
Length = 906
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 255/561 (45%), Gaps = 75/561 (13%)
Query: 38 LEPIVQHVENYDSLHTAKLMCNATSEGIAAIFGPQSIENRNIIESMCQMFDIPHV--EAF 95
LE V ++ DS + ++ +C+ S G I G + + + IP +
Sbjct: 62 LETQVHRLDTSDSYNVSRALCSLLSGGAVTIIGDIRPQALDTVIDYADDTQIPFIFLNNP 121
Query: 96 WDPNKYFIPTNGVHGVNVYPESHLISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLEN 155
DP ++ ++ + VY E L + ++ W F IY+ D++ ++Q +
Sbjct: 122 ADPKRW---SDDRRSMQVYMEPSLTKAIVGMVYTWYRWRRFYYIYDQLDSITRIEQTHDF 178
Query: 156 AHDDDKEIRPGRPSVTIRQLPPDTDDYRPLLKEIKNS--SESHILLDCSMDKT---VTIL 210
H+ ++ R P V ++ R LL +N+ + ++LD + T +T L
Sbjct: 179 LHEFPRDYRYATPDVQPHRVDGAHQCLRLLLDIFENNRGEDVRVVLDIPPEDTQWVITQL 238
Query: 211 KQAKEVHLMGDYQNYILSLTSYWINAHTVDFQDFQPGYANITTVRMINPTNPHIRSIMNG 270
+ K++H + + +I+ +++ ++ + F G NIT
Sbjct: 239 VEDKDIHKIRFH--FIIP----YLSLRSIFLESFITGGVNITG----------------- 275
Query: 271 WIYEENERGRSLNVRAE---TVKIEAALMYDAVYLFAAALQSLGERK------------P 315
+E E G+SL R + T+K+ + D L +L L +
Sbjct: 276 --FEIFEEGKSLQYRRKNPNTIKVRDHIAADTAQLLEQSLMMLQRHQGSASVFGNVNGWQ 333
Query: 316 LPTPLSC--ENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQ 373
L ++C + W++G + + ++ T G +G + DS TG+R S+E E +
Sbjct: 334 LSQEMTCLPQLRWRWRYGRALAKVFQNTTFHGRSGYVQFDS-TGQRTELSVEVQEVTMYR 392
Query: 374 -WKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKN- 431
++GTW+ H EQ+ + I+NRT VTS EPY+MK
Sbjct: 393 GLTIVGTWDKDGFQAHGE--EQVLDKANRTIDNRTRIVTS---------IDEEPYLMKVV 441
Query: 432 ------PETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGEL 483
P TG GY DL +++A + + Y ++ YG P G WNG+IGEL
Sbjct: 442 APIQGLPVTGRHRFEGYCSDLAELVAENVGYDYHIRFVKDGEYGKKEPD-GTWNGVIGEL 500
Query: 484 QEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEPLSFDVWV 543
AD+AI LTITS+R +DFT PFM+LGIS++ +KP P +FSF++PLS ++W+
Sbjct: 501 TRHEADIAIAPLTITSDREKVLDFTKPFMSLGISLMIKKPVDTDPHVFSFMQPLSREIWL 560
Query: 544 YMATAYLGVSLLLFFLARISS 564
A++GVS++LF ++R SS
Sbjct: 561 CTVFAFIGVSVVLFLVSRFSS 581
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
++VS R+V +WWFFTLI+ISSYTANLAAFLT RM+ I++ EDL K IKYG G
Sbjct: 619 KSVSGRIVTSVWWFFTLIIISSYTANLAAFLTTMRMSGSIRSAEDLVKQTEIKYGPYRGG 678
Query: 814 STRNFF 819
ST FF
Sbjct: 679 STYMFF 684
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 574 NSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEYEVEK-NCDL 632
+ VSLYQRM S M +S+P VFV++N +G++RV GKY F +EST EY + C+
Sbjct: 686 QTTVSLYQRMWSFM-TSQPDVFVENNDKGIDRVRDSHGKYVFLIESTLNEYYSSRYPCNT 744
Query: 633 MQVGGLLDSKGYGIAMPT-SKFLAKFSFGFAKLR 665
M+ G LDSKGYGIA P S K + +LR
Sbjct: 745 MKAGSNLDSKGYGIATPMGSDIRDKLTLAILQLR 778
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 671 EPYMMKN-------PETGE--LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGK 721
EPY+MK P TG GY DL +++A + + Y ++ YG P G
Sbjct: 434 EPYLMKVVAPIQGLPVTGRHRFEGYCSDLAELVAENVGYDYHIRFVKDGEYGKKEPD-GT 492
Query: 722 WNGLIGEL 729
WNG+IGEL
Sbjct: 493 WNGVIGEL 500
>gi|262342363|gb|ACY54682.1| GluR2b [Oncorhynchus mykiss]
Length = 461
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 220/432 (50%), Gaps = 41/432 (9%)
Query: 133 WDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTDD--YRPLLKEIK 190
WD F +Y++ L LQ VL+ A + ++ ++ + L + D YR L ++++
Sbjct: 55 WDKFAYLYDSDRGLTTLQVVLDTAAERKWQV----TAINVGNLKDERKDEAYRSLFQDLE 110
Query: 191 NSSESHILLDCSMDKTVTILKQAKEV--HLMGDYQNYILSLTSYWINAHTVDFQDFQPGY 248
N E ++LDC DK I++Q + H+ G +YI++ + ++ D Q G
Sbjct: 111 NKKERRVILDCEQDKVKDIMEQVITIGRHVKG--YHYIIANLGF-VDG---DLSKIQYGG 164
Query: 249 ANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAALQ 308
AN++ ++++ +P + W E + + + ++ +AL YDAV + A +
Sbjct: 165 ANVSGFQIVDFDDPLVSKFDQIWEALEEKEYPGADSK---IRYTSALTYDAVQVMTEAFR 221
Query: 309 SLGERK----PLPTPLSC-ENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSF 362
L +++ C NP+ W G+ I +K + +DG+TG I D Q G+R ++
Sbjct: 222 YLHKQRIDIARKGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFD-QHGKRVNY 280
Query: 363 SLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLF 422
S+ +E ++ +G WN V++M K + N T + +KT +L
Sbjct: 281 SVNIMELKNNGPVKIGYWNE---------VDKMAVTKSDVFPNDTTGMENKTVIVTTIL- 330
Query: 423 QGEPYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKW 476
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T W
Sbjct: 331 -EAPYVMLKKNADLFLDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIW 389
Query: 477 NGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFLEP 536
NG++GEL +AD+A+ LTIT R +DF+ PFM+LGISI+ +KP K +P +FSFL+P
Sbjct: 390 NGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDP 449
Query: 537 LSFDVWVYMATA 548
L++++W+ + A
Sbjct: 450 LAYEIWMCIVFA 461
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 672 PYMM--KNPE---TGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGL 725
PY+M KN + E Y GY VDL IA F Y+ + + YG + +T WNG+
Sbjct: 333 PYVMLKKNADLFLDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGM 392
Query: 726 IGEL 729
+GEL
Sbjct: 393 VGEL 396
>gi|391329138|ref|XP_003739033.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Metaseiulus occidentalis]
Length = 898
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 279/591 (47%), Gaps = 47/591 (7%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
MKI + ++ +T + ++RIN D K LP L+ + V N S AK +C+
Sbjct: 24 MKIGALLDEDDAASSTVIDNVLQRINGDHKILP-RFRLQVVKVRVAN--SFVAAKTVCSL 80
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPH-VEAFWDPNKYFIPTNGVHGVNVYPESHL 119
EG AI GP E + + +P V D + T ++ P
Sbjct: 81 IDEGCVAIIGPTQHEAHKTAQEISARLQVPFFVRCLQDGQESGSSTT----FHLLPPQPS 136
Query: 120 ISKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDT 179
I++ S II W + +IYE + +L+ L +++ DK V + Q
Sbjct: 137 ITRAFSDIIRAKRWKNYALIYEKNQDLIELADLVK-----DKR-------VLLYQYQKGE 184
Query: 180 DDYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTV 239
+ L++EI + +++ ++ + ++ + A V L+ +Y +Y+++ + HT
Sbjct: 185 RGSKRLIREIGSDPQNNYIVHLTAERANEFFRLAGIVGLLSEYFSYLVTAEDF----HT- 239
Query: 240 DFQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDA 299
+Q +NIT ++++ + N ++N+R R +N + +K +AL++D
Sbjct: 240 -WQLPSEALSNITALQLLQ------QEPGNFAPTQDNKRQR-VN-KNSPLKYHSALLHDY 290
Query: 300 VYLFAAALQSLGERKPLP--TPLSCENPS-SWQHGLGIGNLMKSITIDGMTGRINLDSQT 356
+ +FA A+ +L + + + SC PS W GL I +K+ +I G+ G I D+
Sbjct: 291 IMIFARAVGTLSRTQNMAPVSDASCHKPSDGWPMGLTIATQIKATSIHGLFGHIQFDT-F 349
Query: 357 GRRNSFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFA 416
G R+++SL EY +G W+ G+N++R ++ + NR+L V + A
Sbjct: 350 GERSNYSLLVTEYKDGSIVKVGNWSPTSGINYNRNSSWEKVHVEQSLRNRSLRVVTLLSA 409
Query: 417 K--LRVLFQGEPYMMKNPETGELYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
+R P GEL G+ +DL+ ++ L+F Y+ ++ +G + + G
Sbjct: 410 PYVMRRRSGSPPAPGGTAADGELEGFCIDLLHELSRMLHFKYEIRFVNDSRHGARD-RHG 468
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
W+GLI ++ + AD+A+ DLT+TS+R V FT PFM I +LY KP DL S +
Sbjct: 469 HWDGLIRDILDMEADVALADLTVTSDRARVVSFTTPFMASNIEVLY-KPPSSVGDLASLV 527
Query: 535 E----PLSFDVWVYMATAYLGVSLLLFFLARISSGSRL-RYSAKNSNVSLY 580
PLS +VW+ + + +LF+ +++S R+ + S K ++ ++
Sbjct: 528 RGVFSPLSQEVWISGVLCLVVATFVLFYASKLSPRDRIVKLSPKQADERIW 578
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 598 SNKEGVERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMP-TSKFLAK 656
S+ EG+ +V G YAFF+ES EY ++C L+++ +++ GY IA P S +
Sbjct: 697 SSAEGLRKV--HAGGYAFFLESPTAEYHQRRDCSLLKIHSGIETSGYAIATPRASPYTEH 754
Query: 657 FSFGFAKLR 665
FS +L+
Sbjct: 755 FSSALMRLK 763
>gi|312379034|gb|EFR25439.1| hypothetical protein AND_09208 [Anopheles darlingi]
Length = 408
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 46/351 (13%)
Query: 247 GYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAVYLFAAA 306
G NIT R+++ + +++ ++GW + + S E + +AALMYDAV++ A
Sbjct: 58 GAINITGFRIVDTSKKYVKEFLDGW--KRLDPTTSQGAGKELISAQAALMYDAVFVLVEA 115
Query: 307 LQSLGERKP----------------LPT----PLSCENP----SSWQHGLGIGNLMKSIT 342
+ +KP LPT L C + W+HG I ++ +
Sbjct: 116 FAKIMRKKPDQFRAYTMRNRGQPFNLPTNGTRTLDCNTSKGWVTPWEHGDKISRYLRKVE 175
Query: 343 IDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKV-LGTWNTAFGLNHSRTVEQMDKEKKE 401
I G+TG + S+ G+R +++L VE + V + W+ GL + V + + K +
Sbjct: 176 ISGLTGDVRF-SEDGKRQNYTLHVVEMTVNSAMVKVAEWSDEGGL--APVVAKYTRLKTD 232
Query: 402 KIENRTLTVTSKTFAKLRVLFQGEPY-MMKNPETGE-------LYGYSVDLIKMIANELN 453
R T T + EPY M++ PE GE GY DL +++A +L
Sbjct: 233 THYERNKTYIVTTIIE-------EPYIMLRQPEPGETLETNERFEGYCKDLAELVARKLG 285
Query: 454 FTYKFVLERENTYGTLNPQT-GKWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFM 512
Y+ + ++ YG+ NP G W+G++GEL + AD AI +TITSER +DF+ PFM
Sbjct: 286 INYELRIVKDGQYGSENPDVKGGWDGMVGELVRKEADFAIAPMTITSERERVIDFSKPFM 345
Query: 513 TLGISILYRKPAKKQPDLFSFLEPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+LGISI+ ++P K++P +FSFL PLS ++WV + +Y+GVS++L+ ++R S
Sbjct: 346 SLGISIMIKRPVKQKPGVFSFLNPLSKEIWVCVLFSYVGVSIVLYIVSRFS 396
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 671 EPY-MMKNPETGE-------LYGYSVDLIKMIANELNFTYKFVLERENTYGTLNPQT-GK 721
EPY M++ PE GE GY DL +++A +L Y+ + ++ YG+ NP G
Sbjct: 249 EPYIMLRQPEPGETLETNERFEGYCKDLAELVARKLGINYELRIVKDGQYGSENPDVKGG 308
Query: 722 WNGLIGELQEQVDTFIL 738
W+G++GEL + F +
Sbjct: 309 WDGMVGELVRKEADFAI 325
>gi|354481330|ref|XP_003502854.1| PREDICTED: glutamate receptor 1-like [Cricetulus griseus]
Length = 838
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/569 (25%), Positives = 254/569 (44%), Gaps = 115/569 (20%)
Query: 1 MKIVGIFGPNEEEVATAFEIAVRRINKDFKALPPDIILEPIVQHVENYDSLHTAKLMCNA 60
++I G+F + + AF A+ ++ + PP ++ P + V DS C+
Sbjct: 25 LQIGGLFPNQQSQEHAAFRFALSQLTE-----PPKLL--PQIDIVNISDSFEMTYRFCSQ 77
Query: 61 TSEGIAAIFGPQSIENRNIIESMCQMFDIPHVEAFWDPNKYFIPTNGVHGVNVYPESHLI 120
S+G+ AIFG N++ S C + F P+ + + T+ + + PE +
Sbjct: 78 FSKGVYAIFGFYERRTVNMLTSFCGALHV----CFITPS-FPVDTSNQFVLQLRPE---L 129
Query: 121 SKGISVIINDMDWDTFTIIYETHDNLVYLQQVLENAHDDDKEIRPGRPSVTIRQLPPDTD 180
+ + II+ W TF IY+ L LQ+VL+ A + + ++ + L +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV------TAVNILTTTEE 183
Query: 181 DYRPLLKEIKNSSESHILLDCSMDKTVTILKQAKEVHLMGDYQNYILSLTSYWINAHTVD 240
YR L ++++ E +++DC ++ IL Q ++ G +YIL+ + +D
Sbjct: 184 GYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGF----MDID 239
Query: 241 FQDFQPGYANITTVRMINPTNPHIRSIMNGWIYEENERGRSLNVRAETVKIEAALMYDAV 300
F+ AN+T +++N T+ IM W R+ + R T
Sbjct: 240 LNKFKESGANVTGFQLVNYTDTIPARIMQQW--------RTSDARDHT------------ 279
Query: 301 YLFAAALQSLGERKPLPTPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRN 360
+ ++P + +G+TG + + + GRR
Sbjct: 280 --------RVDWKRP------------------------KVRFEGLTGNVQFN-EKGRRT 306
Query: 361 SFSLEFVEYVSDQWKVLGTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRV 420
+++L +E D + +G WN + T Q + ++NRT TVT+
Sbjct: 307 NYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSS-VQNRTYTVTT-------- 357
Query: 421 LFQGEPYMM--KNP---ETGELY-GYSVDLIKMIANELNFTYKFVLERENTYGTLNPQTG 474
+PY+M KN E + Y GY V+L IA + G
Sbjct: 358 -ILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHV---------------------G 395
Query: 475 KWNGLIGELQEQRADLAICDLTITSERRAAVDFTMPFMTLGISILYRKPAKKQPDLFSFL 534
WNG++GEL RAD+A+ LTIT R +DF PFM+LGISI+ +KP K +P +FSFL
Sbjct: 396 AWNGMVGELVYGRADVAVAPLTITLVREEVIDFFKPFMSLGISIMIKKPQKSKPGVFSFL 455
Query: 535 EPLSFDVWVYMATAYLGVSLLLFFLARIS 563
+PL++++W+ + AY+GVS++LF ++R S
Sbjct: 456 DPLAYEIWMCIVFAYIGVSVVLFLVSRFS 484
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 567 RLRYSAKNSNVSLYQRMHSAMESSRPSVFVKSNKEGVERVVKEKGKYAFFMESTGIEY-E 625
R++ S ++++++M + M+S+ PSVFV++ +EG+ RV K KGKYA+ +EST EY E
Sbjct: 599 RMQLYCIRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIE 658
Query: 626 VEKNCDLMQVGGLLDSKGYGIAMPTSKFL 654
K CD M+VGG LDSKGYGIA P L
Sbjct: 659 QRKPCDTMKVGGNLDSKGYGIATPKGSAL 687
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%)
Query: 755 AVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMGS 814
++S R+V G+WWFFTLI+ISSYTANLAAFLT RM PI++ EDLAK I + V G
Sbjct: 532 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIDHTGVLQGF 591
Query: 815 TRNFFK 820
T F K
Sbjct: 592 TPVFGK 597
>gi|47210498|emb|CAF93180.1| unnamed protein product [Tetraodon nigroviridis]
Length = 423
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/411 (31%), Positives = 184/411 (44%), Gaps = 97/411 (23%)
Query: 318 TPLSCENPSSWQHGLGIGNLMKSITIDGMTGRINLDSQTGRRNSFSLEFVEYVSDQWKVL 377
+ L C W+ G L+K DG+TGRI + G R F L+ +
Sbjct: 21 SSLQCNRHKPWRFGNRFMALIKEAHWDGLTGRITFNRTNGLRTDFDLD-----------I 69
Query: 378 GTWNTAFGLNHSRTVEQMDKEKKEKIENRTLTVTSKTFAKLRVLFQGEPYMMKNPETGEL 437
GTW+ GLN + + + NR+L V++ EPY+M L
Sbjct: 70 GTWDPPSGLNMTDNQRGRTSNVSDSLSNRSLVVST---------ILEEPYVMFRRSDKPL 120
Query: 438 YG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNGLIGELQEQRADLA 491
YG Y +DL+K +A+ L FTY+ L + YG+ + TG+WNG++ EL + RADLA
Sbjct: 121 YGNERFEGYCMDLLKELASILGFTYEVHLVEDGKYGSQDETTGQWNGMVRELMDHRADLA 180
Query: 492 ICDLTITSERRAAVDFTMPFMTLGISILYRKPAKK--------QPDLFSFLEPLSFDV-- 541
+ L IT R VDF+ PFMTLGISILYRKP QP L +L+ S +
Sbjct: 181 VAPLAITYVREKVVDFSKPFMTLGISILYRKPNGTNTWGLLLPQPALARYLDVYSAGLLG 240
Query: 542 --------WVY---------------MATAYLGVSLLLFFLARISS-------------- 564
WV ++T +G F L ISS
Sbjct: 241 FPEPGRSFWVLEVAVRATGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERM 300
Query: 565 ------------GSRLRYSA----------KNSNVSLYQRMHSAMESSRPSVFVKSNKEG 602
+++ Y A K + +S Y +M M S R +V VKS +EG
Sbjct: 301 ESPIDSADDLAKQTKIEYGAVEDGSTMAFFKKTKISTYDKMWEFMSSRRHTVMVKSVEEG 360
Query: 603 VERVVKEKGKYAFFMESTGIEYEVEKNCDLMQVGGLLDSKGYGIAMPTSKF 653
+ RV+ YAF MEST IE+ ++NC+L Q+GGL+DS+ YG+ P +
Sbjct: 361 IRRVLTS--DYAFLMESTTIEFVTQRNCNLTQIGGLIDSRAYGVGTPMGTY 409
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 754 EAVSTRLVAGMWWFFTLIMISSYTANLAAFLTNTRMNPPIKNVEDLAKAGRIKYGCVEMG 813
+A+STR+V G+WWFFTLI+ISSYTANLAAFLT RM PI + +DLAK +I+YG VE G
Sbjct: 265 KALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDG 324
Query: 814 STRNFFK 820
ST FFK
Sbjct: 325 STMAFFK 331
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 671 EPYMMKNPETGELYG------YSVDLIKMIANELNFTYKFVLERENTYGTLNPQTGKWNG 724
EPY+M LYG Y +DL+K +A+ L FTY+ L + YG+ + TG+WNG
Sbjct: 108 EPYVMFRRSDKPLYGNERFEGYCMDLLKELASILGFTYEVHLVEDGKYGSQDETTGQWNG 167
Query: 725 LIGELQEQ 732
++ EL +
Sbjct: 168 MVRELMDH 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,790,816,444
Number of Sequences: 23463169
Number of extensions: 539719860
Number of successful extensions: 1387273
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3778
Number of HSP's successfully gapped in prelim test: 3693
Number of HSP's that attempted gapping in prelim test: 1360639
Number of HSP's gapped (non-prelim): 18410
length of query: 821
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 670
effective length of database: 8,816,256,848
effective search space: 5906892088160
effective search space used: 5906892088160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)