BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16208
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LGI +GG+F+VL AG +S L ++ EF++ +RK A E+ S E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEI 866
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+F++ C + V+ K P + K++++ N+ FN++
Sbjct: 867 RFSLTC---QRRVKHKPQPPMMVKTDAVINMHTFNDR 900
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LGI +GG+F+VL AG +S L ++ EF++ +RK A E+ S E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEI 866
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+F++ C + V+ K P + K++++ N+ FN++
Sbjct: 867 RFSLTC---QRRVKHKPQPPMMVKTDAVINMHTFNDR 900
>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus
GN=Grik4 PE=2 SV=1
Length = 956
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+FVVLI G V+ ++LEFLW +R E +S + M E
Sbjct: 791 KEEDHRAK-GLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRHSEASE-VSVCQEMMTE 848
Query: 70 LKFAIRCYGTSKPVRRKA 87
L+ I C P RR++
Sbjct: 849 LRSIILCQDNIHPRRRRS 866
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LGI +GG+F+VL AG +S L ++ EF++ +RK A E+ S E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRKTAEREQRSFCSTVADEI 866
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+F++ C + ++ K P + K++++ N+ FN++
Sbjct: 867 RFSLTC---QRRLKHKPQPPMMVKTDAVINMHTFNDR 900
>sp|Q63273|GRIK5_RAT Glutamate receptor ionotropic, kainate 5 OS=Rattus norvegicus
GN=Grik5 PE=1 SV=1
Length = 979
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+FVVLI G ++ +++EF+W+ R+ A E++S + + E
Sbjct: 790 KEEDHRAK-GLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848
Query: 70 LKFAIRCYGT 79
L+ A+ C T
Sbjct: 849 LRHAVSCRKT 858
>sp|Q61626|GRIK5_MOUSE Glutamate receptor ionotropic, kainate 5 OS=Mus musculus GN=Grik5
PE=2 SV=2
Length = 979
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+FVVLI G ++ +++EF+W+ R+ A E++S + + E
Sbjct: 790 KEEDHRAK-GLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848
Query: 70 LKFAIRCYGT 79
L+ A+ C T
Sbjct: 849 LRHAVSCRKT 858
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LGI +GG+F+VL AG +S L ++ EF++ +RK A E+ S E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRKTAEREQRSFCSTVADEI 866
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+F++ C + ++ K P + K++++ N+ FN++
Sbjct: 867 RFSLTC---QRRLKHKPQPPMMVKTDAVINMHTFNDR 900
>sp|Q91755|GRIK2_XENLA Glutamate receptor ionotropic, kainate 2 (Fragment) OS=Xenopus
laevis GN=grik2 PE=2 SV=1
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LG+ N+GG+F+VL AG +S ++ EFL+ +K A EK S A + EL
Sbjct: 183 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 242
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+ +++C + ++ K P + K+ + N+ FN++
Sbjct: 243 RMSLKC---QRRLKHKPQPPVIVKTEEVINMHTFNDR 276
>sp|Q16478|GRIK5_HUMAN Glutamate receptor ionotropic, kainate 5 OS=Homo sapiens GN=GRIK5
PE=2 SV=2
Length = 980
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+F+VLI G ++ +++EF+W+ R+ A E++S + + E
Sbjct: 790 KEEDHRAK-GLGMENIGGIFIVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848
Query: 70 LKFAIRCYGT 79
L+ A+ C T
Sbjct: 849 LRHAVSCRKT 858
>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2
PE=1 SV=4
Length = 908
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LG+ N+GG+F+VL AG +S ++ EFL+ +K A EK S A + EL
Sbjct: 806 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 865
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+ +++C + ++ K P + K+ + N+ FN++
Sbjct: 866 RMSLKC---QRRLKHKPQAPVIVKTEEVINMHTFNDR 899
>sp|P42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 OS=Rattus norvegicus
GN=Grik2 PE=1 SV=2
Length = 908
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LG+ N+GG+F+VL AG +S ++ EFL+ +K A EK S A + EL
Sbjct: 806 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 865
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+ +++C + ++ K P + K+ + N+ FN++
Sbjct: 866 RMSLKC---QRRLKHKPQAPVIVKTEEVINMHTFNDR 899
>sp|Q38PU3|GRIK2_MACFA Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis
GN=GRIK2 PE=2 SV=1
Length = 908
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LG+ N+GG+F+VL AG +S ++ EFL+ +K A EK S A + EL
Sbjct: 806 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 865
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+ +++C + ++ K P + K+ + N+ FN++
Sbjct: 866 RMSLKC---QRRLKHKPQAPVIVKTEEVINMHTFNDR 899
>sp|Q13002|GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens GN=GRIK2
PE=1 SV=1
Length = 908
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+E+ + LG+ N+GG+F+VL AG +S ++ EFL+ +K A EK S A + EL
Sbjct: 806 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 865
Query: 71 KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
+ +++C + ++ K P + K+ + N+ FN++
Sbjct: 866 RMSLKC---QRRLKHKPQAPVIVKTEEVINMHTFNDR 899
>sp|Q8BMF5|GRIK4_MOUSE Glutamate receptor ionotropic, kainate 4 OS=Mus musculus GN=Grik4
PE=2 SV=2
Length = 956
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+FVVLI G V+ ++LEFLW +R E +S + + E
Sbjct: 791 KEEDHRAK-GLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRHSEASE-VSVCQEMVTE 848
Query: 70 LKFAIRCYGTSKPVRRKA 87
L+ I C P RR++
Sbjct: 849 LRNIILCQDNIHPRRRRS 866
>sp|Q16099|GRIK4_HUMAN Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens GN=GRIK4
PE=2 SV=2
Length = 956
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+FVVLI G V+ ++LEFLW +R E +S + + E
Sbjct: 791 KEEDHRAK-GLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRHSEATE-VSVCQEMVTE 848
Query: 70 LKFAIRC 76
L+ I C
Sbjct: 849 LRSIILC 855
>sp|Q5IS46|GRIK4_PANTR Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes
GN=GRIK4 PE=2 SV=1
Length = 956
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
K+ED LG++N+GG+FVVLI G V+ ++LEFLW +R E +S + + E
Sbjct: 791 KEEDHRAK-GLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRHSEATE-VSVCQEMVTE 848
Query: 70 LKFAIRC 76
L+ I C
Sbjct: 849 LRSIILC 855
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
+ED + LG++N+GG+F+VL AG +S ++ EFL+ RK E+
Sbjct: 821 EEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKNNDVEQKGKSSRLRFYF 880
Query: 71 KFAIRCYGTSK 81
+ +R +G+ K
Sbjct: 881 RNKVRFHGSKK 891
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRK 53
+ED + LG++N+GG+F+VL AG +S ++ EF++ RK
Sbjct: 821 EEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRK 863
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 11 DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRK 53
+ED + LG++N+GG+F+VL AG +S ++ EF++ RK
Sbjct: 821 EEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRK 863
>sp|Q9Z2W8|GRIA4_MOUSE Glutamate receptor 4 OS=Mus musculus GN=Gria4 PE=1 SV=2
Length = 902
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 KDEDETDNPE-LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFML 68
KD D L + NV GVF +L+ G G++ L +L+EF + R A KL+ EA
Sbjct: 798 KDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKLTFSEAIRN 857
Query: 69 ELKFAI 74
+ + +I
Sbjct: 858 KARLSI 863
>sp|P48058|GRIA4_HUMAN Glutamate receptor 4 OS=Homo sapiens GN=GRIA4 PE=2 SV=2
Length = 902
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 KDEDETDNPE-LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFML 68
KD D L + NV GVF +L+ G G++ L +L+EF + R A KL+ EA
Sbjct: 798 KDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKLTFSEAIRN 857
Query: 69 ELKFAI 74
+ + +I
Sbjct: 858 KARLSI 863
>sp|Q38PU5|GRIA4_MACFA Glutamate receptor 4 OS=Macaca fascicularis GN=GRIA4 PE=2 SV=1
Length = 902
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAI 74
L + NV GVF +L+ G G++ L +L+EF + R A KL+ EA + + +I
Sbjct: 809 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKLTFSEAIRNKARLSI 863
>sp|P19493|GRIA4_RAT Glutamate receptor 4 OS=Rattus norvegicus GN=Gria4 PE=1 SV=1
Length = 902
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAI 74
L + NV GVF +L+ G G++ L +L+EF + R A KL+ EA + + +I
Sbjct: 809 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKLTFSEATRNKARLSI 863
>sp|Q60934|GRIK1_MOUSE Glutamate receptor ionotropic, kainate 1 OS=Mus musculus GN=Grik1
PE=2 SV=2
Length = 836
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRK 53
LG++N+GG+F+VL AG +S ++ EF++ RK
Sbjct: 717 LGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRK 750
>sp|P23818|GRIA1_MOUSE Glutamate receptor 1 OS=Mus musculus GN=Gria1 PE=1 SV=1
Length = 907
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 10 KDEDETDNPE-LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVR 52
KD D L + NV GVF +LI G G++ L +L+EF + R
Sbjct: 790 KDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSR 833
>sp|Q9Z2W9|GRIA3_MOUSE Glutamate receptor 3 OS=Mus musculus GN=Gria3 PE=1 SV=2
Length = 888
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 10 KDEDETDNPE-LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
KD D L + NV GVF +L+ G G++ + +L+EF + R + KL+
Sbjct: 802 KDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLT 854
>sp|Q5R4M0|GRIA2_PONAB Glutamate receptor 2 OS=Pongo abelii GN=GRIA2 PE=2 SV=1
Length = 883
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ L +L+EF + R A K++
Sbjct: 808 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVA 849
>sp|Q38PU7|GRIA2_MACFA Glutamate receptor 2 OS=Macaca fascicularis GN=GRIA2 PE=2 SV=1
Length = 883
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ L +L+EF + R A K++
Sbjct: 808 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVA 849
>sp|P42262|GRIA2_HUMAN Glutamate receptor 2 OS=Homo sapiens GN=GRIA2 PE=1 SV=3
Length = 883
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ L +L+EF + R A K++
Sbjct: 808 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVA 849
>sp|P19491|GRIA2_RAT Glutamate receptor 2 OS=Rattus norvegicus GN=Gria2 PE=1 SV=2
Length = 883
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ L +L+EF + R A K++
Sbjct: 808 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVA 849
>sp|P23819|GRIA2_MOUSE Glutamate receptor 2 OS=Mus musculus GN=Gria2 PE=1 SV=3
Length = 883
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ L +L+EF + R A K++
Sbjct: 808 LSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKVA 849
>sp|Q38PU8|GRIA1_MACFA Glutamate receptor 1 OS=Macaca fascicularis GN=GRIA1 PE=2 SV=1
Length = 906
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVR 52
L + NV GVF +LI G G++ L +L+EF + R
Sbjct: 801 LSLSNVAGVFYILIGGLGLAMLVALIEFCYKSR 833
>sp|P42261|GRIA1_HUMAN Glutamate receptor 1 OS=Homo sapiens GN=GRIA1 PE=1 SV=2
Length = 906
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVR 52
L + NV GVF +LI G G++ L +L+EF + R
Sbjct: 801 LSLSNVAGVFYILIGGLGLAMLVALIEFCYKSR 833
>sp|P19490|GRIA1_RAT Glutamate receptor 1 OS=Rattus norvegicus GN=Gria1 PE=1 SV=2
Length = 907
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVR 52
L + NV GVF +LI G G++ L +L+EF + R
Sbjct: 801 LSLSNVAGVFYILIGGLGLAMLVALIEFCYKSR 833
>sp|P42263|GRIA3_HUMAN Glutamate receptor 3 OS=Homo sapiens GN=GRIA3 PE=1 SV=2
Length = 894
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ + +L+EF + R + KL+
Sbjct: 819 LSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLT 860
>sp|Q38PU6|GRIA3_MACFA Glutamate receptor 3 OS=Macaca fascicularis GN=GRIA3 PE=2 SV=1
Length = 894
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ + +L+EF + R + KL+
Sbjct: 819 LSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLT 860
>sp|P19492|GRIA3_RAT Glutamate receptor 3 OS=Rattus norvegicus GN=Gria3 PE=1 SV=1
Length = 888
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV GVF +L+ G G++ + +L+EF + R + KL+
Sbjct: 813 LSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLT 854
>sp|O43424|GRID2_HUMAN Glutamate receptor ionotropic, delta-2 OS=Homo sapiens GN=GRID2
PE=2 SV=2
Length = 1007
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 1 MFSVMDTLQKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRK 53
++S +DT QK L I + GVF +L AG +S ++LE WN RK
Sbjct: 813 LYSSVDTKQK------GGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRK 859
>sp|Q00961|NMDE3_RAT Glutamate receptor ionotropic, NMDA 2C OS=Rattus norvegicus
GN=Grin2c PE=1 SV=1
Length = 1237
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVR-KVAVEEKLSPYEA 65
Q +++E + +L IDN+ GVF +L+ G++ L E L W +R V +L
Sbjct: 799 QNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPNSSQLD---- 854
Query: 66 FMLELKFAI-RCYG--TSKPVRRKASTPSLKSNSL-AN-LDLFNNKMNMIN 111
F+L I C+ S P + +P L ++S AN L + +M+N
Sbjct: 855 FLLAFSRGIYSCFNGVQSLPSPARPPSPDLTADSAQANVLKMLQAARDMVN 905
>sp|Q14957|NMDE3_HUMAN Glutamate receptor ionotropic, NMDA 2C OS=Homo sapiens GN=GRIN2C
PE=2 SV=3
Length = 1233
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVR 52
Q +++E + +L IDN+ GVF +L+ G++ L E L W +R
Sbjct: 799 QNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLR 844
>sp|Q00959|NMDE1_RAT Glutamate receptor ionotropic, NMDA 2A OS=Rattus norvegicus
GN=Grin2a PE=1 SV=2
Length = 1464
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLE--FLWNVRKVAVEEKLSPYEAF 66
+++E + +L IDN+ GVF +L A +S + + E F W +R S
Sbjct: 801 HNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYWKLR-FCFTGVCSDRPGL 859
Query: 67 MLELKFAIRCYGTSKPVRRKASTPSL-----KSNSLANLDLFNNKMNMINYNSTR 116
+ + I + K +P +SN L L N NM N NS+R
Sbjct: 860 LFSISRGIYSCIHGVHIEEKKKSPDFNLTGSQSNMLKLLRSAKNISNMSNMNSSR 914
>sp|P35436|NMDE1_MOUSE Glutamate receptor ionotropic, NMDA 2A OS=Mus musculus GN=Grin2a
PE=1 SV=2
Length = 1464
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLE--FLWNVRKVAVEEKLSPYEAF 66
+++E + +L IDN+ GVF +L A +S + + E F W +R S
Sbjct: 801 HNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYWKLR-FCFTGVCSDRPGL 859
Query: 67 MLELKFAIRCYGTSKPVRRKASTPSL-----KSNSLANLDLFNNKMNMINYNSTR 116
+ + I + K +P +SN L L N NM N NS+R
Sbjct: 860 LFSISRGIYSCIHGVHIEEKKKSPDFNLTGSQSNMLKLLRSAKNISNMSNMNSSR 914
>sp|Q5IS45|NMDE1_PANTR Glutamate receptor ionotropic, NMDA 2A OS=Pan troglodytes GN=GRIN2A
PE=2 SV=1
Length = 1464
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLE--FLWNVRKVAVEEKLSPYEAF 66
+++E + +L IDN+ GVF +L A +S + + E F W +R S
Sbjct: 801 HNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYWKLR-FCFTGVCSDRPGL 859
Query: 67 MLELKFAIRCYGTSKPVRRKASTPSL-----KSNSLANLDLFNNKMNMINYNSTR 116
+ + I + K +P +SN L L N NM N NS+R
Sbjct: 860 LFSISRGIYSCIHGVHIEEKKKSPDFNLTGSQSNMLKLLRSAKNISNMSNMNSSR 914
>sp|P34230|PXA2_YEAST Peroxisomal long-chain fatty acid import protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PXA2 PE=1
SV=1
Length = 853
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 18 PELGIDNVGGVFVVLIA--GCGVSFLFSLLEFLWNVR 52
PEL D G +++I GCG S LF +L LW +R
Sbjct: 489 PELSFDLKHGNHLLIIGPNGCGKSSLFRILGGLWPIR 525
>sp|Q03445|GLK1_DROME Glutamate receptor 1 OS=Drosophila melanogaster GN=Glu-RI PE=2 SV=2
Length = 991
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 EDETDNP-ELGIDNVGGVFVVLIAGCGVSFLFSLLEFL 48
+ ET P EL + NV G++ +LI G ++ + +++EF
Sbjct: 882 DQETSTPNELSLSNVAGIYYILIGGLLLAVIVAIMEFF 919
>sp|P26591|GLRK_LYMST Glutamate receptor OS=Lymnaea stagnalis PE=2 SV=1
Length = 917
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 20 LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
L + NV G+F +LI G V+ L + EFL+ R + + ++S
Sbjct: 814 LTLANVAGIFYILIGGLVVAVLSAAFEFLYKSRMDSRKSRMS 855
>sp|Q62645|NMDE4_RAT Glutamate receptor ionotropic, NMDA 2D OS=Rattus norvegicus
GN=Grin2d PE=1 SV=2
Length = 1323
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVR 52
D+ E + +L IDN+ GVF +L+ G+S L E L W +R
Sbjct: 826 HNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLR 871
>sp|Q03391|NMDE4_MOUSE Glutamate receptor ionotropic, NMDA 2D OS=Mus musculus GN=Grin2d
PE=1 SV=3
Length = 1323
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVR 52
D+ E + +L IDN+ GVF +L+ G+S L E L W +R
Sbjct: 826 HNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLR 871
>sp|O15399|NMDE4_HUMAN Glutamate receptor ionotropic, NMDA 2D OS=Homo sapiens GN=GRIN2D
PE=2 SV=2
Length = 1336
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVR 52
D+ E + +L IDN+ GVF +L+ G+S L E L W +R
Sbjct: 829 HNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLR 874
>sp|Q01098|NMDE3_MOUSE Glutamate receptor ionotropic, NMDA 2C OS=Mus musculus GN=Grin2c
PE=2 SV=2
Length = 1239
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVR-KVAVEEKLSPYEA 65
+++E + +L IDN+ GVF +L+ G++ L E L W +R V +L
Sbjct: 799 HNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPSSSQLD---- 854
Query: 66 FMLELKFAI-RCYG--TSKPVRRKASTPSLKSNS 96
F+L I C+ S P + +P L + S
Sbjct: 855 FLLAFSRGIYSCFNGVQSLPSPARPPSPDLTAGS 888
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,897,144
Number of Sequences: 539616
Number of extensions: 1388994
Number of successful extensions: 3497
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3443
Number of HSP's gapped (non-prelim): 68
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)