Your job contains 1 sequence.
>psy1621
MEELQMVCYPPGHGACADVHVNVGARIGAGFNADINVEACADVDVNAAELRRRVLIVGDS
MTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAM
HGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGR
GGRFGRKGVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1621
(224 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 647 2.0e-63 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 647 2.0e-63 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 647 2.0e-63 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 647 2.0e-63 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 647 2.0e-63 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 647 2.0e-63 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 647 2.0e-63 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 647 2.0e-63 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 645 3.3e-63 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 643 5.4e-63 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 643 5.4e-63 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 643 5.4e-63 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 643 5.4e-63 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 643 5.4e-63 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 643 5.4e-63 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 643 5.4e-63 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 643 5.4e-63 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 643 5.4e-63 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 643 5.4e-63 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 640 1.1e-62 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 639 1.4e-62 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 620 1.8e-62 2
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 632 7.9e-62 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 620 1.5e-60 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 613 8.1e-60 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 577 2.3e-58 2
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 597 4.0e-58 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 596 5.1e-58 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 593 1.1e-57 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 589 2.8e-57 1
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 586 5.9e-57 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 582 1.6e-56 1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 581 2.0e-56 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 581 2.0e-56 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 581 2.0e-56 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 581 2.0e-56 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 581 2.0e-56 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 581 2.0e-56 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 581 2.0e-56 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 581 2.0e-56 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 581 2.0e-56 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 580 2.5e-56 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 565 9.9e-55 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 565 9.9e-55 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 559 4.3e-54 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 548 6.3e-53 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 548 6.3e-53 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 541 3.5e-52 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 540 4.4e-52 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 511 4.2e-51 2
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 511 4.2e-51 2
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 526 1.3e-50 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 526 1.3e-50 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 496 2.0e-49 2
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 514 2.5e-49 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 507 1.4e-48 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 493 4.2e-47 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 493 4.2e-47 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 488 1.4e-46 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 471 9.1e-45 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 385 1.2e-35 1
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 384 1.5e-35 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 381 3.1e-35 1
UNIPROTKB|E9PR46 - symbol:DDX25 "ATP-dependent RNA helica... 311 8.2e-28 1
RGD|735141 - symbol:Eif4a1 "eukaryotic translation initia... 310 1.0e-27 1
UNIPROTKB|J9NSS1 - symbol:DDX25 "Uncharacterized protein"... 309 1.3e-27 1
UNIPROTKB|Q9UHL0 - symbol:DDX25 "ATP-dependent RNA helica... 311 1.5e-27 1
MGI|MGI:1353582 - symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) bo... 310 2.0e-27 1
UNIPROTKB|J9PAF3 - symbol:J9PAF3 "Uncharacterized protein... 305 3.5e-27 1
UNIPROTKB|B4DRZ7 - symbol:DDX19A "ATP-dependent RNA helic... 305 3.5e-27 1
UNIPROTKB|I3L0H8 - symbol:DDX19A "ATP-dependent RNA helic... 305 3.5e-27 1
UNIPROTKB|I3L352 - symbol:DDX19A "ATP-dependent RNA helic... 305 3.5e-27 1
UNIPROTKB|F1S758 - symbol:LOC100523329 "Uncharacterized p... 305 3.5e-27 1
UNIPROTKB|F1RVF0 - symbol:LOC100512980 "Uncharacterized p... 306 3.9e-27 1
RGD|68381 - symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box heli... 307 4.3e-27 1
UNIPROTKB|E2RR50 - symbol:DDX19A "Uncharacterized protein... 305 6.8e-27 1
UNIPROTKB|Q9NUU7 - symbol:DDX19A "ATP-dependent RNA helic... 305 6.8e-27 1
UNIPROTKB|I3LC00 - symbol:DDX19A "Uncharacterized protein... 305 6.8e-27 1
UNIPROTKB|Q9UMR2 - symbol:DDX19B "ATP-dependent RNA helic... 305 6.9e-27 1
UNIPROTKB|F1S432 - symbol:DDX19B "Uncharacterized protein... 305 7.1e-27 1
UNIPROTKB|H3BQK0 - symbol:DDX19B "HCG1998531, isoform CRA... 305 7.4e-27 1
UNIPROTKB|F1PIZ6 - symbol:DDX25 "Uncharacterized protein"... 303 8.8e-27 1
FB|FBgn0024804 - symbol:Dbp80 "Dead box protein 80" speci... 301 1.4e-26 1
UNIPROTKB|Q3ZBV2 - symbol:DDX19A "ATP-dependent RNA helic... 302 1.5e-26 1
UNIPROTKB|Q2TBP1 - symbol:DDX25 "ATP-dependent RNA helica... 302 1.6e-26 1
UNIPROTKB|F1MUT6 - symbol:DDX19B "Uncharacterized protein... 302 1.6e-26 1
MGI|MGI:99526 - symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box... 301 1.9e-26 1
RGD|1303136 - symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box p... 301 1.9e-26 1
RGD|1593382 - symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box po... 301 1.9e-26 1
UNIPROTKB|E9PTL9 - symbol:Ddx19b "Protein Ddx19b" species... 301 2.1e-26 1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd... 297 2.5e-26 1
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica... 297 2.5e-26 1
ZFIN|ZDB-GENE-080721-12 - symbol:zgc:193690 "zgc:193690" ... 300 3.0e-26 1
UNIPROTKB|H9KYU4 - symbol:DDX25 "Uncharacterized protein"... 296 3.2e-26 1
ZFIN|ZDB-GENE-020419-30 - symbol:ddx19 "DEAD/H (Asp-Glu-A... 299 3.7e-26 1
UNIPROTKB|F1MSI6 - symbol:DDX25 "ATP-dependent RNA helica... 296 7.7e-26 1
UNIPROTKB|J3QL17 - symbol:DDX25 "ATP-dependent RNA helica... 295 8.3e-26 1
UNIPROTKB|Q5ZMC1 - symbol:DDX19B "Uncharacterized protein... 290 3.5e-25 1
UNIPROTKB|Q9DGP9 - symbol:deadsouth "ATP-dependent RNA he... 287 8.0e-25 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 280 5.6e-24 1
WARNING: Descriptions of 678 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 250 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 309
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 310 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 369
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 370 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 423
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/174 (74%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 131/189 (69%), Positives = 149/189 (78%)
Query: 41 ADV-DVNAAELRR--RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVI 95
ADV +V +R R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVI
Sbjct: 223 ADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVI 282
Query: 96 FCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGID 155
F NTRRKVDWLTE M ++FTVSA+HGDMDQ RD+IMR+FRSGSSRVLITTDLLARGID
Sbjct: 283 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGID 342
Query: 156 VQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEE 215
VQQVSLVINYDLP+NRENYIH VAINFVT EDKR L+D E FYNT +EE
Sbjct: 343 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 402
Query: 216 MPMNVADLI 224
MPMNVADLI
Sbjct: 403 MPMNVADLI 411
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 139 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 198
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 199 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 258
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 259 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 312
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 354 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 139 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 198
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 199 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 258
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 259 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 312
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 127/174 (72%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 235 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 294
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 295 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 354
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT EDKR L+D E FYNT +EEMPMNVADLI
Sbjct: 355 RENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 408
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 126/161 (78%), Positives = 135/161 (83%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M ++FTVSAMHGD
Sbjct: 241 IRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGD 300
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
MDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+NRENYIH
Sbjct: 301 MDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGR 360
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
VAIN VT EDKRTL+D E FYNT IEEMP+NVADLI
Sbjct: 361 FGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 401
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 128/186 (68%), Positives = 147/186 (79%)
Query: 43 VDVNAAELRR--RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCN 98
+DV +R R+L+ + +T IRQFYI +E+E+WK DTLCDLY TL+ITQAVIF N
Sbjct: 244 LDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFIN 303
Query: 99 TRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQ 158
TRRKVDWLTE M ++FTVSA+HGDMDQ RD+IMR+FRSGSSRVLITTDLLARGIDVQQ
Sbjct: 304 TRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARGIDVQQ 363
Query: 159 VSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPM 218
VSLVINYDLP+NRENYIH VAIN VT +DKRTL+D E FYNT +EEMPM
Sbjct: 364 VSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPM 423
Query: 219 NVADLI 224
NVADLI
Sbjct: 424 NVADLI 429
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 620 (223.3 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 120/174 (68%), Positives = 143/174 (82%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFYI +E+E+WK DTL DLY T++ITQAVIFCNTRRKVDWLT+ +
Sbjct: 223 RILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKL 282
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDMDQ RD+IM++FRSGSSRVLI TDLLARGIDVQQVSLVINYDLP+N
Sbjct: 283 TARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPAN 342
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVTA+D R +++ EQFY+T+IEEMPMNVADLI
Sbjct: 343 RENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
Score = 36 (17.7 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 25 ARIGAGFNADINVEACADVDVNAAELRRRVL 55
A+ G G A ++ +D N + + +L
Sbjct: 67 AQSGTGKTATFSISVLQKIDTNVKQCQALIL 97
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 123/174 (70%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +E+E+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDM+Q RDVIM++FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 293 HARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAIN +T +DKRTL+D E FYNT +EEMPMNVADLI
Sbjct: 353 RENYIHRIGRGGRFGRKGVAINMITEDDKRTLRDIETFYNTTVEEMPMNVADLI 406
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 115/174 (66%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFY+ +E+E+WK DTLCDLY T+++TQAVIFCNTRRKVDWLTE +
Sbjct: 219 RILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQL 278
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+++FTVS+MHGDMDQ RD +M +FR+GSSR+LITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 279 TERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPAN 338
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH V+INFVT +D R +++ EQFYNT IEEMPMN+ADLI
Sbjct: 339 RENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMNIADLI 392
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 119/174 (68%), Positives = 142/174 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ +T I+QFYI +E+E+WK DTL DLY T++ITQAVIFCNTRRKVDWLT+ +
Sbjct: 225 RILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKL 284
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSAMHGDM+Q RDVIM++FRSGSSRVLI TDLLARGIDVQQVSLVINYDLP+N
Sbjct: 285 TARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPAN 344
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVTA+D R +++ EQFY+T+IEEMPMNVADLI
Sbjct: 345 RENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 577 (208.2 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 111/174 (63%), Positives = 137/174 (78%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
++L+ D +T I+QF++ +E+E+WKFDTLCDLY TL+ITQAVIFCNT+RKVD+L+E M
Sbjct: 235 KILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKM 294
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
FTVS+MHGDM Q RD IM +FRSG SRVLITTD+ ARGIDVQQVSLVINYDLP+N
Sbjct: 295 RSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNN 354
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV ++D + L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 355 RELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408
Score = 40 (19.1 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 25 ARIGAGFNADINVEACADVDVNAAELRRRVL 55
A+ G G + I + C VD ++ E++ +L
Sbjct: 79 AQSGTGKTSMIALSVCQVVDTSSREVQALIL 109
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 118/173 (68%), Positives = 138/173 (79%)
Query: 54 VLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESML 111
+L+ + +T I+QFY+ +++E+WK TLCDLY TLSITQ+VIFCNTRRKVD LT+ M
Sbjct: 231 ILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMS 290
Query: 112 KKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR 171
FTVSAMHGDM+Q R+VIM+QFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR
Sbjct: 291 IHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR 350
Query: 172 ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
ENYIH VAINF+T +D+R LKD EQFY+T IEEMP N+ADLI
Sbjct: 351 ENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/186 (63%), Positives = 141/186 (75%)
Query: 43 VDVNAAELRR--RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCN 98
+DV +R R+L+ D +T IRQFYI +++++WKFD LCDLY +++TQAVIFCN
Sbjct: 217 LDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCN 276
Query: 99 TRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQ 158
TRRKVD LTE M + +FTVS +HGDMDQ RD IMR+FRSGSSRVLITTD+LARGIDVQQ
Sbjct: 277 TRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQ 336
Query: 159 VSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPM 218
VSLVINYDLPSNRENYIH VAINFVT D R LK+ E +Y T+IEEMP
Sbjct: 337 VSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPE 396
Query: 219 NVADLI 224
++ADLI
Sbjct: 397 SIADLI 402
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 114/174 (65%), Positives = 139/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 226 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 285
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q RD IM++FR+G SRVLITTD+ ARGIDVQQVSLVINYDLP+N
Sbjct: 286 REANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNN 345
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV ++D R L+D EQ+Y+T+I+EMP+NVADLI
Sbjct: 346 RELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPVNVADLI 399
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 113/174 (64%), Positives = 139/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
RVL+ D +T I+Q++I +E+E+WKFDTLCDLY TL+ITQAVIFCNTRRKVDWLT+ M
Sbjct: 225 RVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKM 284
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHG+M Q RD IM+ FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+N
Sbjct: 285 REANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTN 344
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT++D R L+D E +Y+T+I+EMPMNVADL+
Sbjct: 345 RENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 112/174 (64%), Positives = 137/174 (78%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFY+ +E+EDWK +TLCDLY TL+ITQ+VIF NTRRKVDWLT+ M
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++ TVSA HGDMDQN RD+IMR+FRSGSSRVLITTDLLARGIDVQQVSLVIN+DLP+
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
ENY+H VAINFVT +D+R L D ++FYN +EE+P NVADL+
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 233 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 293 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNN 352
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 353 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 406
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 241 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 300
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 301 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 360
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 361 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 414
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 239 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 298
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 299 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 358
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 359 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 412
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 238 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 297
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 298 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 357
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 358 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 238 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 297
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 298 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 357
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 358 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 238 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 297
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 298 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 357
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 358 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 238 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 297
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 298 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 357
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 358 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 238 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 297
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 298 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 357
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 358 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 238 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 297
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 298 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 357
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMNVADLI
Sbjct: 358 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 109/174 (62%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFY+ +++E+WK +TLCDLY TL+ITQ+VIF NTRRKVDWLT+ M
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++ TVSA HGDMDQN RD+IMR+FRSGSSRVLITTDLLARGIDVQQVSLVIN+DLP+
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
ENY+H VAINF+T+ED+R + D ++FYN +EE+P NVADL+
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 109/174 (62%), Positives = 136/174 (78%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T ++Q++I +E+E+WKFDTLCDLY TL+ITQAVIFCN+RRKVDWLTE M
Sbjct: 221 RILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKM 280
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTV++MHG+M Q RD IM+ FR G+SRVLI TD+ ARGIDVQQVSLVINYDLP+N
Sbjct: 281 REANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPAN 340
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFVT ED R L+D EQ+Y+T I+EMPMN+ D++
Sbjct: 341 RENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMNIGDMV 394
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 105/174 (60%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ ++RE+WKFDTL DLY TL+ITQAV+FCNTRRKVDWLT+ M
Sbjct: 226 RILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKM 285
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM+Q RD +M++FR+G++RVLI+TD+ ARG+DV QVSLVINYDLP+N
Sbjct: 286 KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNN 345
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMN+AD+I
Sbjct: 346 RELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 105/174 (60%), Positives = 138/174 (79%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ ++RE+WKFDTL DLY TL+ITQAV+FCNTRRKVDWLT+ M
Sbjct: 226 RILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKM 285
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM+Q RD +M++FR+G++RVLI+TD+ ARG+DV QVSLVINYDLP+N
Sbjct: 286 KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNN 345
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMN+AD+I
Sbjct: 346 RELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 106/169 (62%), Positives = 133/169 (78%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDWLTE M
Sbjct: 234 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ FTVS+MHGDM Q R+ IM++FRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP+N
Sbjct: 294 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 353
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMN 219
RE YIH VAINFV +D R L+D EQ+Y+T+I+EMPMN
Sbjct: 354 RELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 402
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 107/177 (60%), Positives = 135/177 (76%)
Query: 52 RRVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTES 109
+ +L+ D +T IRQFY+ +E+E+WK DTLCDLY TL+ITQ++I+CNTR+KVD LT+
Sbjct: 222 KTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQE 281
Query: 110 MLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS 169
M + FTVS MHGDMDQ RD+IMR+FRSGS+RVL+TTDLLARGIDVQQVSLVINYDLP+
Sbjct: 282 MHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPA 341
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRT--LKDTEQFYNTRIEEMPMNVADLI 224
+ + YIH VAINFVT +DK LK E +Y+T+IEEMP+ VAD +
Sbjct: 342 SPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQIEEMPLEVADYL 398
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 107/177 (60%), Positives = 135/177 (76%)
Query: 52 RRVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTES 109
+ +L+ D +T IRQFY+ +E+E+WK DTLCDLY TL+ITQ++I+CNTR+KVD LT+
Sbjct: 222 KTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQE 281
Query: 110 MLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS 169
M + FTVS MHGDMDQ RD+IMR+FRSGS+RVL+TTDLLARGIDVQQVSLVINYDLP+
Sbjct: 282 MHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPA 341
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRT--LKDTEQFYNTRIEEMPMNVADLI 224
+ + YIH VAINFVT +DK LK E +Y+T+IEEMP+ VAD +
Sbjct: 342 SPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQIEEMPLEVADYL 398
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 102/174 (58%), Positives = 133/174 (76%)
Query: 53 RVLIVGD--SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
++L+ D S++ I+Q+Y+ EREDWKFDTLCDLY L+ITQAVIFCNT+ KV+WL + M
Sbjct: 226 KILVKRDEISLSGIKQYYVQCEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQM 285
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
K+ FTV AMHGDM Q+ RD IM FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP++
Sbjct: 286 KKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTD 345
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
+ENYIH AIN +T +D TLK+ E++Y+T+I+EMPMN+ D++
Sbjct: 346 KENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNINDIM 399
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 105/174 (60%), Positives = 132/174 (75%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QF++ +E+EDWKF TLCD+Y +L+ITQAVIFCNT++KVD LTE M
Sbjct: 232 RILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQM 291
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
FTV++MHGDM Q R+ I++ FRSG +RVLITTD+LARGIDVQQVSLVINYDLP +
Sbjct: 292 RDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPID 351
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RENYIH VAINFV D R L+D EQFY+T+I+EMP+N A +I
Sbjct: 352 RENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVNFASII 405
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 511 (184.9 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 98/174 (56%), Positives = 133/174 (76%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFY+ +E E++K++ L DLY ++S+TQAVIFCNTRRKV+ LT +
Sbjct: 221 RILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKL 280
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+FTVSA++ D+ Q RD IM++FRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP+N
Sbjct: 281 RNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPAN 340
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
+ENYIH VAINFVT ED +++ E+FY+T+IEE+P ++A L+
Sbjct: 341 KENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
Score = 37 (18.1 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 31 FNADINVEACADVD--VNAAE-LRRRVLIVG 58
F+ DI V AC V AE LR ++VG
Sbjct: 115 FHMDIKVHACIGGTSFVEDAEGLRDAQIVVG 145
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 511 (184.9 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 98/174 (56%), Positives = 133/174 (76%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFY+ +E E++K++ L DLY ++S+TQAVIFCNTRRKV+ LT +
Sbjct: 221 RILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKL 280
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+FTVSA++ D+ Q RD IM++FRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP+N
Sbjct: 281 RNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPAN 340
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
+ENYIH VAINFVT ED +++ E+FY+T+IEE+P ++A L+
Sbjct: 341 KENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
Score = 37 (18.1 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 31 FNADINVEACADVD--VNAAE-LRRRVLIVG 58
F+ DI V AC V AE LR ++VG
Sbjct: 115 FHMDIKVHACIGGTSFVEDAEGLRDAQIVVG 145
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 102/173 (58%), Positives = 132/173 (76%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFYI +E ED+KFD LCDLY ++S+TQAVIFCNTR KV++LT +
Sbjct: 223 RILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKL 282
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++ FTVSA+H D+ Q RD IM++FRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP+N
Sbjct: 283 REQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPAN 342
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADL 223
+ENYIH VAINFVT D +++ E+FY+T+IEEMP ++ L
Sbjct: 343 KENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMPADIGAL 395
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 102/173 (58%), Positives = 132/173 (76%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFYI +E ED+KFD LCDLY ++S+TQAVIFCNTR KV++LT +
Sbjct: 223 RILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKL 282
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++ FTVSA+H D+ Q RD IM++FRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP+N
Sbjct: 283 REQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPAN 342
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADL 223
+ENYIH VAINFVT D +++ E+FY+T+IEEMP ++ L
Sbjct: 343 KENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMPADIGAL 395
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 496 (179.7 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 99/174 (56%), Positives = 122/174 (70%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+Q+Y+ +++E+WKFDTLCDLYG L+I QA+IFCNTR+KVDWLTE M
Sbjct: 222 RILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKM 281
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
F VS+MHGD Q RD IM QFRS SRVLI +D+ ARGIDVQ VS VINYD+P+N
Sbjct: 282 RSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNN 341
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
E YIH VAINFV + D + LKD E+ Y T+I EMP ADL+
Sbjct: 342 PELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMP---ADLV 392
Score = 36 (17.7 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 25 ARIGAGFNADINVEACADVDVNAAELRRRVLIVGDS 60
A+ G G + I + C V++++ +++ VL++ S
Sbjct: 66 AQSGTGKTSMIAISVCQIVNISSRKVQ--VLVLSPS 99
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 99/152 (65%), Positives = 120/152 (78%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T I+QFY+ +E+E+WK +TLCDLY TL+ITQ+VIF NTRRKVDWLT+ M
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++ TVSA HGDMDQN RD+IMR+FRSGSSRVLITTDLLARGIDVQQVSLVIN+DLP+
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTL 202
ENY+H VAINFVT +D+R L
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 98/126 (77%), Positives = 111/126 (88%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T I+QFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 234 RILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKM 293
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++FTVSA+HGDMDQ RDVIMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+N
Sbjct: 294 HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN 353
Query: 171 RENYIH 176
RENYIH
Sbjct: 354 RENYIH 359
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 92/174 (52%), Positives = 128/174 (73%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
++L+ D +T I+QF++ IE+E WK++TL DLY +L+ITQAV+FCNT+ KVDWLT+ M
Sbjct: 217 KILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKM 276
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
L+ FTV MH M Q+ RD IM +FR RVLI+TD+ RG+DVQ+VSLV+NYDLP++
Sbjct: 277 LESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNS 336
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE+YIH VAINFV +D + L+D EQ+Y+T+I+EMPMN+ +L+
Sbjct: 337 RESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNITELL 390
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 92/174 (52%), Positives = 128/174 (73%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
++L+ D +T I+QF++ IE+E WK++TL DLY +L+ITQAV+FCNT+ KVDWLT+ M
Sbjct: 217 KILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKM 276
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
L+ FTV MH M Q+ RD IM +FR RVLI+TD+ RG+DVQ+VSLV+NYDLP++
Sbjct: 277 LESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNS 336
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
RE+YIH VAINFV +D + L+D EQ+Y+T+I+EMPMN+ +L+
Sbjct: 337 RESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNITELL 390
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 91/173 (52%), Positives = 124/173 (71%)
Query: 53 RVLIVGD--SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
++L+ D S+ I+Q+ + +++E+WKFDTLCD+Y +L+ITQ VIFCNT++KVDWL++ +
Sbjct: 226 KILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRL 285
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
++ F V +MHGDM Q RD +M FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP
Sbjct: 286 IQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEI 345
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADL 223
ENYIH VAINF+T D L++ E+FY+ +I MP N A+L
Sbjct: 346 IENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 96/173 (55%), Positives = 122/173 (70%)
Query: 54 VLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESML 111
+L+ D +T IRQFY+ + E KF+ L DLY TLSITQ+VIFCNTRRKVDWLT M
Sbjct: 225 ILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYETLSITQSVIFCNTRRKVDWLTSKMT 284
Query: 112 KKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR 171
+++FTVS+ HGD Q RD I++ FRSG++RVLITTDLLARGIDVQQVSLVIN+DLP+N
Sbjct: 285 EQKFTVSSTHGD--QKDRDGILQAFRSGATRVLITTDLLARGIDVQQVSLVINFDLPTNI 342
Query: 172 ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
ENYIH VAINF+T ++ + + + YNT I EMP ++ +
Sbjct: 343 ENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRHYNTYIAEMPQDIGSFL 395
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 76/102 (74%), Positives = 86/102 (84%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 233 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 292
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLAR 152
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLL R
Sbjct: 293 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLNR 334
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 75/102 (73%), Positives = 86/102 (84%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 116 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 175
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLAR 152
++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLL +
Sbjct: 176 HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLGK 217
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 76/167 (45%), Positives = 110/167 (65%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ D +T IRQFYI +++++WKF+ LCDL T TQA+IFCNTRR+V LTE +
Sbjct: 188 RILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQL 247
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
+ VS HG+M+ N R+ +++ F S ++RVL+TTDL+ARG+++++ SL+INYD+ N
Sbjct: 248 MSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGN 306
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
ENY+ + I+F T D LK E Y+TRIEEMP
Sbjct: 307 MENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEEMP 353
>UNIPROTKB|E9PR46 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 IPI:IPI00984425 Ensembl:ENST00000526875
ArrayExpress:E9PR46 Bgee:E9PR46 Uniprot:E9PR46
Length = 407
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/186 (34%), Positives = 107/186 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L ++ IRQ+Y+ E K+ LC++YG+++I QA+IFC TRR
Sbjct: 220 DPNVIKLRKEEL----TLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNA 275
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ R I+++FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 276 KWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 335
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
N+DLP + E Y+H +A N + ++ +L + +N+ I+++
Sbjct: 336 NFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQL- 394
Query: 218 MNVADL 223
N D+
Sbjct: 395 -NAEDM 399
>RGD|735141 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0031100 "organ regeneration" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
PROSITE:PS51194 RGD:735141 GO:GO:0005524 GO:GO:0031100
GO:GO:0003743 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG107989 HSSP:P10081 IPI:IPI00369618 UniGene:Rn.91523
EMBL:AF410810 ProteinModelPortal:Q812C4 IntAct:Q812C4 STRING:Q812C4
PRIDE:Q812C4 UCSC:RGD:735141 InParanoid:Q812C4 ArrayExpress:Q812C4
Genevestigator:Q812C4 Uniprot:Q812C4
Length = 138
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/84 (71%), Positives = 69/84 (82%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 55 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 114
Query: 111 LKKEFTVSAMHGDMDQNARDVIMR 134
++FTVSAMHGDMDQ RDVIMR
Sbjct: 115 HARDFTVSAMHGDMDQKERDVIMR 138
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 63/179 (35%), Positives = 104/179 (58%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L +++ IRQ+Y+ E K+ LC++YG ++I QA+IFC TRR
Sbjct: 182 DPNVIKLRKEEL----TLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 237
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ + R I+++FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 238 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 297
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 298 NFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 356
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 311 (114.5 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 64/186 (34%), Positives = 107/186 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L ++ IRQ+Y+ E K+ LC++YG+++I QA+IFC TRR
Sbjct: 296 DPNVIKLRKEEL----TLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNA 351
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ R I+++FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 352 KWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 411
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
N+DLP + E Y+H +A N + ++ +L + +N+ I+++
Sbjct: 412 NFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQL- 470
Query: 218 MNVADL 223
N D+
Sbjct: 471 -NAEDM 475
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 310 (114.2 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 63/179 (35%), Positives = 102/179 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L ++ IRQ+Y+ E K+ LC++YG ++I QA+IFC TRR
Sbjct: 297 DPNVIKLRKEEL----TLNNIRQYYVLCENRKGKYQALCNIYGGITIGQAIIFCQTRRNA 352
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ R I+++FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 353 KWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 412
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 413 NFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 471
>UNIPROTKB|J9PAF3 [details] [associations]
symbol:J9PAF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00530000063236 EMBL:AAEX03004077
Ensembl:ENSCAFT00000043955 OMA:IMKDIQR Uniprot:J9PAF3
Length = 267
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 79 DPNIIKLKREE----ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTA 134
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 135 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 194
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 195 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 254
Query: 217 PMNVADLI 224
+ D I
Sbjct: 255 DTDDLDEI 262
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 200 DPNVIKLKREE----ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 255
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 256 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 315
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 316 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 375
Query: 217 PMNVADLI 224
+ D I
Sbjct: 376 DTDDLDEI 383
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 259 DPNVIKLKREE----ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 314
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 315 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 374
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 375 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 434
Query: 217 PMNVADLI 224
+ D I
Sbjct: 435 DTDDLDEI 442
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 208 DPNVIKLKREE----ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 263
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 264 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 323
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 324 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 383
Query: 217 PMNVADLI 224
+ D I
Sbjct: 384 DTDDLDEI 391
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 64/180 (35%), Positives = 105/180 (58%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRK 102
D N +LR+ L ++ IRQ+Y+ R+D K+ LC++YG ++I QA+IFC TRR
Sbjct: 192 DPNVIKLRKEEL----TLNNIRQYYVLCGNRKD-KYQALCNIYGGITIGQAIIFCQTRRN 246
Query: 103 VDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLV 162
WLT M++ VS + G++ + R I+++FR G +VLITT++ ARGIDV+QV++V
Sbjct: 247 AKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCARGIDVKQVTIV 306
Query: 163 INYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
+N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 307 VNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 366
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 306 (112.8 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 64/180 (35%), Positives = 105/180 (58%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRK 102
D N +LR+ L ++ IRQ+Y+ R+D K+ LC++YG ++I QA+IFC TRR
Sbjct: 275 DPNVIKLRKEEL----TLNNIRQYYVLCGNRKD-KYQALCNIYGGITIGQAIIFCQTRRN 329
Query: 103 VDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLV 162
WLT M++ VS + G++ + R I+++FR G +VLITT++ ARGIDV+QV++V
Sbjct: 330 AKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLITTNVCARGIDVKQVTIV 389
Query: 163 INYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
+N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 390 VNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 449
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 307 (113.1 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 63/179 (35%), Positives = 102/179 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L ++ IRQ+Y+ E K+ LC++YG ++I QA+IFC TRR
Sbjct: 296 DPNVIKLRKEEL----TLNNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 351
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ R I+++FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 352 KWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 411
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 412 NFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 305 (112.4 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 290 DPNIIKLKREE----ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 305 (112.4 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 290 DPNVIKLKREE----ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 305 (112.4 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 290 DPNIIKLKREE----ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 305 (112.4 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 291 DPNVIKLKREE----ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 346
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 347 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 406
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 407 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 466
Query: 217 PMNVADLI 224
+ D I
Sbjct: 467 DTDDLDEI 474
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 305 (112.4 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 293 DPNIIKLKREE----ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTA 348
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 349 SWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 408
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 409 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 468
Query: 217 PMNVADLI 224
+ D I
Sbjct: 469 DTDDLDEI 476
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 305 (112.4 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 64/188 (34%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC+LYG ++I QA+IFC+TR+
Sbjct: 296 DPNVIKLKREE----ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTA 351
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 352 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 411
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 412 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 471
Query: 217 PMNVADLI 224
+ D I
Sbjct: 472 DTDDLDEI 479
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 303 (111.7 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 62/179 (34%), Positives = 103/179 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L +++ IRQ+Y+ E K+ LC++YG ++I QA+IFC TRR
Sbjct: 275 DPNVIKLRKEEL----TLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 330
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ + R I+++FR G +VLITT++ RGIDV+QV++V+
Sbjct: 331 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVSRRGIDVKQVTIVV 390
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 391 NFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 449
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 301 (111.0 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 61/179 (34%), Positives = 110/179 (61%)
Query: 53 RVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLK 112
R++ +S+ I+Q+Y+ + E+ K++ + ++YG +S+ QA+IFC+T+R WL M
Sbjct: 277 RLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTS 336
Query: 113 KEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP---- 168
+V+ + GD+ R ++ +FRSG +VLITT++L+RGID++Q+ +V+N+DLP
Sbjct: 337 DGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQLQVVVNFDLPVDLD 396
Query: 169 --SNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLK---DTEQFYNTRIEEMPMNVAD 222
++ E Y+H +AIN +T D++T+K D E+ +N +IE + + AD
Sbjct: 397 GMADCETYLHRIGRTGRFGKSGIAINLIT--DEKTMKVCSDIEKHFNKKIEVLNTDSAD 453
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 302 (111.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC++YG ++I QA+IFC+TR+
Sbjct: 290 DPNIIKLKREE----ETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 302 (111.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 64/180 (35%), Positives = 105/180 (58%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRK 102
D N +LR+ L ++ IRQ+Y+ R+D K+ LC++YG ++I QA+IFC TRR
Sbjct: 296 DPNVIKLRKEEL----TLNNIRQYYVLCGNRKD-KYQALCNIYGGITIGQAIIFCQTRRN 350
Query: 103 VDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLV 162
WLT M++ VS + G++ + R I+++FR G +VLITT++ ARGIDV+QV++V
Sbjct: 351 AKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIV 410
Query: 163 INYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
+N+DLP N+ E Y+H +A N + + L + +N+ I+++
Sbjct: 411 VNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 302 (111.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC++YG ++I QA+IFC+TR+
Sbjct: 296 DPNIIKLKREE----ETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTA 351
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 352 SWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 411
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 412 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 471
Query: 217 PMNVADLI 224
+ D I
Sbjct: 472 DTDDLDEI 479
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 301 (111.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ + KF LC+LYG ++I QA+IFC+TR+
Sbjct: 290 DPNIIKLKREE----ETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 301 (111.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ + KF LC+LYG ++I QA+IFC+TR+
Sbjct: 290 DPNIIKLKREE----ETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 301 (111.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ + KF LC+LYG ++I QA+IFC+TR+
Sbjct: 290 DPNIIKLKREE----ETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 345
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 346 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 405
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 406 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Query: 217 PMNVADLI 224
+ D I
Sbjct: 466 DTDDLDEI 473
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 301 (111.0 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 63/188 (33%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ + KF LC+LYG ++I QA+IFC+TR+
Sbjct: 294 DPNIIKLKREE----ETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTA 349
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 350 SWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 409
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +A+N V ++ L ++ +N +IE +
Sbjct: 410 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 469
Query: 217 PMNVADLI 224
+ D I
Sbjct: 470 DTDDLDEI 477
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 60/157 (38%), Positives = 92/157 (58%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
+ Q+Y +++ E K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 255 VTQYYAFVQ-EKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSK 313
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M QN R+ + FR G+ R L+ +DLL RGID+Q V++VIN+D P N E Y+H
Sbjct: 314 MAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGR 373
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
VAIN +T ED+ TL+ EQ TRIE +P V
Sbjct: 374 FGHLGVAINLITYEDRHTLRRIEQELRTRIEPIPKTV 410
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 60/157 (38%), Positives = 92/157 (58%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
+ Q+Y +++ E K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 255 VTQYYAFVQ-EKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSK 313
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M QN R+ + FR G+ R L+ +DLL RGID+Q V++VIN+D P N E Y+H
Sbjct: 314 MAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGR 373
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
VAIN +T ED+ TL+ EQ TRIE +P V
Sbjct: 374 FGHLGVAINLITYEDRHTLRRIEQELRTRIEPIPKTV 410
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 300 (110.7 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 64/178 (35%), Positives = 106/178 (59%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ ++ KF+ LC++YG ++I QA+IFC+TR+
Sbjct: 283 DPNIIKLKREE----ETLDTIKQYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKMA 338
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
+WL M K+ V+ + G+M R ++ +FR G +VLITT++ ARGIDV+QVS+VI
Sbjct: 339 NWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVI 398
Query: 164 NYDLP----SNREN--YIHXXXXXXXXXXXXVAINFVTAE-DKRTLKDTEQFYNTRIE 214
N+DLP SN +N Y+H +AIN V ++ LK E+ + +++
Sbjct: 399 NFDLPLDKDSNPDNETYLHRIGRTGRFGKRGLAINMVDSQRSMEILKTYERHFGKKLQ 456
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 58/169 (34%), Positives = 98/169 (57%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
++T IRQ+Y + K++ LC+LYG+++I QA+IFC TRR DWL+ M++ V+
Sbjct: 241 TLTNIRQYYFVCRNWEQKYEALCNLYGSITIGQAMIFCQTRRSADWLSVKMIQDGHQVAM 300
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR------EN 173
+ ++ R ++++FR G +VLITT++ ARGIDV QV++V+N+ LP NR E
Sbjct: 301 LTAELSIVQRADVIQRFRDGKEKVLITTNVCARGIDVAQVTIVVNFGLPINRQKQPDFET 360
Query: 174 YIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
Y+H +A N V + ++ E+ + T+I+ + + D
Sbjct: 361 YLHRIGRTGRFGKRGIAFNMVDSHSAHLVRCIEEHFQTKIKRLDPDCMD 409
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 299 (110.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 62/188 (32%), Positives = 107/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ ++ KF LC++YG ++I QA+IFC+TR+
Sbjct: 299 DPNIIKLKREE----ETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTA 354
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + ++ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 355 GWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVI 414
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +AIN ++ TL + +N +IE++
Sbjct: 415 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMADSKFSMNTLNRIQDHFNKKIEKL 474
Query: 217 PMNVADLI 224
+ D I
Sbjct: 475 DTDDLDEI 482
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 296 (109.3 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 63/180 (35%), Positives = 104/180 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRK 102
D N +LR+ L ++ IRQ+Y+ R+D K+ LC++YG ++I QA+IFC TRR
Sbjct: 296 DPNVIKLRKEEL----TLNNIRQYYVLCGNRKD-KYQALCNIYGGITIGQAIIFCQTRRN 350
Query: 103 VDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLV 162
WLT M++ VS + G++ + R I+++FR G +VLITT++ ARGIDV+QV++V
Sbjct: 351 AKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIV 410
Query: 163 INYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
+N+DLP N+ E Y+H +A N + + L + ++ I+++
Sbjct: 411 VNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFSENIKQL 470
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 295 (108.9 bits), Expect = 8.3e-26, P = 8.3e-26
Identities = 60/173 (34%), Positives = 99/173 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +LR+ L ++ IRQ+Y+ E K+ LC++YG+++I QA+IFC TRR
Sbjct: 299 DPNVIKLRKEEL----TLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNA 354
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WLT M++ VS + G++ R I+++FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 355 KWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 414
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYN 210
N+DLP + E Y+H +A N + ++ +L + ++
Sbjct: 415 NFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFS 467
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 290 (107.1 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 61/188 (32%), Positives = 106/188 (56%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L+R +++ I+Q+Y+ D KF LC++YG ++I QA++FC+TR+
Sbjct: 291 DPNIIKLKREE----ETLDTIKQYYVLCNSRDEKFRALCNIYGAITIAQAMVFCHTRKTA 346
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL + K+ V+ + G+M R ++ +FR G +VL+TT++ ARGIDV+QVS+VI
Sbjct: 347 GWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVI 406
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT-LKDTEQFYNTRIEEM 216
N+DLP ++ E Y+H +AIN V ++ L ++ ++ +I ++
Sbjct: 407 NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFSKKINKL 466
Query: 217 PMNVADLI 224
+ D I
Sbjct: 467 DTDDLDEI 474
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 287 (106.1 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 59/179 (32%), Positives = 103/179 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N +L++ L ++ I+QFY E ++ K+ LC+LYG ++I QA++FC TR+
Sbjct: 296 DPNIIKLKKEEL----TLKNIQQFYDQCENKEQKYSALCNLYGVITIAQAIVFCQTRKIA 351
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
WL++ + V+ + G++ R ++++FR G +VL+TT++ ARGIDV+QVS+V+
Sbjct: 352 SWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTTNVCARGIDVEQVSIVV 411
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N+DLP N E Y+H +A++ + LK+ E +NT+I ++
Sbjct: 412 NFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVYMLKEIEDHFNTKITKL 470
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 280 (103.6 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 61/178 (34%), Positives = 101/178 (56%)
Query: 50 LRRRVLI-VGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWL 106
LR+ +I + D +T + Q+Y ++E E K L L+ L I Q++IFCN+ +V+ L
Sbjct: 319 LRKPYVINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELL 377
Query: 107 TESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYD 166
+ + + ++ +H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D
Sbjct: 378 AKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 437
Query: 167 LPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
P E+Y+H +A+N VT ED+ + TEQ T I+ +P N+ I
Sbjct: 438 FPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNIDQAI 495
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 279 (103.3 bits), Expect = 9.7e-24, P = 9.7e-24
Identities = 63/164 (38%), Positives = 95/164 (57%)
Query: 44 DVNAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKV 103
D N+ EL++ L V D I+Q Y+ E KF+ LC+LYG L+I ++IF +
Sbjct: 346 DANSLELKQEELNV-DG---IKQLYMDCRSEQHKFEVLCELYGLLTIGSSIIFVEKKETA 401
Query: 104 DWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVI 163
D L M K+ TVS +HG +D RD ++ FR G S+VLITT++LARGID+ VS+V+
Sbjct: 402 DVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLITTNVLARGIDIASVSMVV 461
Query: 164 NYDLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRT 201
NYD+P+++ Y+H V+I+F+ D+R+
Sbjct: 462 NYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFI--HDRRS 503
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 278 (102.9 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 60/173 (34%), Positives = 97/173 (56%)
Query: 54 VLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESML 111
V+ + D +T I QFY ++E E K L L+ L I Q++IFCN+ +V+ L + +
Sbjct: 331 VINLMDELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKIT 389
Query: 112 KKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR 171
+ ++ +H M Q+ R+ + FR+G+ R L+ TDL RGID+Q V++VIN+D P N
Sbjct: 390 ELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNA 449
Query: 172 ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
E Y+H +A+N +T ED+ L EQ T I+++P ++ I
Sbjct: 450 ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 502
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 274 (101.5 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 56/163 (34%), Positives = 94/163 (57%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+++ I+QFY+ + E KFDTL L S A++F T+R+VD LTE++ + +T
Sbjct: 212 TVSNIQQFYLEVH-ERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEG 270
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R V +R+F+ G+ VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 271 IHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIG 330
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ F+T +K L+ EQ +++ M D
Sbjct: 331 RTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAPTLD 373
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 272 (100.8 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 57/158 (36%), Positives = 90/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
I Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 301 ITQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHA 358
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P N E Y+H
Sbjct: 359 KMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSG 418
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T+ED+ LK E T I+ +P ++
Sbjct: 419 RYGHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPSSI 456
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 272 (100.8 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 55/157 (35%), Positives = 88/157 (56%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I Q+Y ++E E K L L+ L I Q++IFCN+ +V+ L + + + ++ H
Sbjct: 259 ITQYYAFVE-EKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAK 317
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q AR+ + FR+G R L+ +DLL RGID+Q V++VIN+D P N E Y+H
Sbjct: 318 MQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR 377
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN ++ ED+ L + E+ T I+ +P +
Sbjct: 378 YGHLGLAINLISWEDRFNLYNIERDLGTEIQPIPSTI 414
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 270 (100.1 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 61/181 (33%), Positives = 106/181 (58%)
Query: 46 NAAELRRRVLIVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDW 105
NA E+R + + S+ I+Q Y+ + E+ K++ L +LYG L+I Q++IFC + +
Sbjct: 310 NANEIRLKTEEL--SVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEE 367
Query: 106 LTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINY 165
+ M TV+ + G+++ RD IM FR G+S+VL+TT+++ARGIDV QV+LV+NY
Sbjct: 368 IARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNY 427
Query: 166 DLPSNR------ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDT---EQFYNTRIEEM 216
D+P ++ + Y+H V+INFV DK++ ++ ++++ I +
Sbjct: 428 DMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFV--HDKKSWEEMNAIQEYFQRPITRV 485
Query: 217 P 217
P
Sbjct: 486 P 486
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 55/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 309 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 366
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 367 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 426
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P N+
Sbjct: 427 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 464
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 265 (98.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 54/157 (34%), Positives = 87/157 (55%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I Q+Y ++ +E K L L+ L I QA+IFCN+ +V+ L + + + ++ +H
Sbjct: 272 ITQYYAFV-KERQKVHCLNTLFAKLQINQAIIFCNSITRVELLAKKITELGYSSFYIHAR 330
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R+ + FR+G+ R L+++DL RGID+Q V++VIN+D P N E Y+H
Sbjct: 331 MSQTHRNRVFHDFRNGACRCLVSSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGR 390
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T ED+ L E T I+ +P +
Sbjct: 391 YGHLGLAINLITFEDRFNLYKIEVELGTEIQPIPNEI 427
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 268 (99.4 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 55/157 (35%), Positives = 86/157 (54%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I QFY ++E E K L L+ L I Q++IFCN+ +V+ L + + + ++ H
Sbjct: 242 ISQFYAFVE-EKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAK 300
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q AR+ + +FR G R L+ +DLL RGID+Q V++VIN+D P E Y+H
Sbjct: 301 MPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGR 360
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN ++ D+ +L EQ T I+ +P +
Sbjct: 361 FGHLGLAINLMSWNDRYSLYKIEQELGTEIKPIPATI 397
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 268 (99.4 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 55/157 (35%), Positives = 86/157 (54%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I QFY ++E E K L L+ L I Q++IFCN+ +V+ L + + + ++ H
Sbjct: 242 ISQFYAFVE-EKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAK 300
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q AR+ + +FR G R L+ +DLL RGID+Q V++VIN+D P E Y+H
Sbjct: 301 MPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGR 360
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN ++ D+ +L EQ T I+ +P +
Sbjct: 361 FGHLGLAINLMSWNDRYSLYKIEQELGTEIKPIPATI 397
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 267 (99.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 54/154 (35%), Positives = 88/154 (57%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
+ Q+Y ++E E K L L+ L I Q++IFCN+ +V+ L + + + ++ +H
Sbjct: 366 VTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 424
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q+ R+ + FR+G+ R L+ TDL RGID+Q V++VIN+D P E+Y+H
Sbjct: 425 MVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGR 484
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
+A+N VT ED+ + TEQ T I+ +P
Sbjct: 485 FGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIP 518
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 266 (98.7 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 53/157 (33%), Positives = 92/157 (58%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+++ I+QFY+ ++ E KFDTL L S A++F T+R+VD L E++ + +
Sbjct: 212 TVSNIQQFYLEVQ-ERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEG 270
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R V +R+F+ G+ VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 271 IHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIG 330
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
+A+ F+T +K L+ EQ +++ M
Sbjct: 331 RTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRM 367
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 266 (98.7 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 55/157 (35%), Positives = 86/157 (54%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I Q+Y ++E E K L L+ L I Q++IFCN+ +V+ L + + + ++ H
Sbjct: 251 ITQYYAFVE-EKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAR 309
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R+ + FR+G R L+ +DLL RGID+Q V++VIN+D P N E Y+H
Sbjct: 310 MLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR 369
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN + +D+ L EQ T I+ +P N+
Sbjct: 370 FGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNI 406
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 262 (97.3 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 53/154 (34%), Positives = 88/154 (57%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
+ Q+Y ++E E K L L+ L I Q++IFCN+ +V+ L + + + ++ +H
Sbjct: 261 VTQYYAFVE-ERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAK 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R+ + FR+G+ R L+++DL RGID+Q V++VIN+D P + E Y+H
Sbjct: 320 MVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSETYLHRIGRSGR 379
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
+AIN +T ED+ +L EQ T I+ +P
Sbjct: 380 FGHLGLAINLITYEDRFSLYKIEQELGTEIKPIP 413
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 263 (97.6 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 54/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 308 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 365
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 366 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSG 425
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P ++
Sbjct: 426 RFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSI 463
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 263 (97.6 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 263 (97.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 263 (97.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 263 (97.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 263 (97.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 263 (97.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 263 (97.6 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 54/163 (33%), Positives = 92/163 (56%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
+M I+QFY+ ++ E KFD L L S A++F T+R+VD L+E++ + +
Sbjct: 211 TMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEG 269
Query: 120 MHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXX 179
+HGD+ Q R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P + E+Y+H
Sbjct: 270 IHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIG 329
Query: 180 XXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A+ FVT + LK+ E+ +++ M D
Sbjct: 330 RTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLD 372
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 261 (96.9 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 54/158 (34%), Positives = 89/158 (56%)
Query: 64 IRQFYIYI-EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+ Q+Y Y+ ER+ K L L+ L I Q++IFCN+ ++V+ L + + + ++ +H
Sbjct: 311 VTQYYAYVTERQ--KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHA 368
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R+ + FR+G R L+ TDL RGID+Q V++VIN+D P E Y+H
Sbjct: 369 KMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSG 428
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN +T +D+ LK E+ T I+ +P ++
Sbjct: 429 RFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSI 466
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 259 (96.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 54/157 (34%), Positives = 81/157 (51%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I Q+Y ++E E K L L+ L I QA+IFCN+ +V+ L + + ++ H
Sbjct: 258 ITQYYAFVE-ERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHAR 316
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R+ + +FR G R L+ +DLL RGID+Q V++VIN+D P E Y+H
Sbjct: 317 MKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGR 376
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AIN + D+ L EQ T I +P +
Sbjct: 377 FGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATI 413
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 52 RRVLIVGDSMT--RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTES 109
+ V +VG T IRQ Y Y E K + L + + QA++FC T+++VD + E
Sbjct: 200 KTVKLVGREKTVPAIRQVY-YELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQ 258
Query: 110 MLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS 169
+ + + +HGDM Q R ++ F++G + +L+ TD+ ARG+D+ VS VIN+D+P
Sbjct: 259 LNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQ 318
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
N E+YIH AI + +++ LK E+ N R++
Sbjct: 319 NPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLK 363
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 52 RRVLIVGDSMT--RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTES 109
+ V +VG T IRQ Y Y E K + L + + QA++FC T+++VD + E
Sbjct: 200 KTVKLVGREKTVPAIRQVY-YELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQ 258
Query: 110 MLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS 169
+ + + +HGDM Q R ++ F++G + +L+ TD+ ARG+D+ VS VIN+D+P
Sbjct: 259 LNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQ 318
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
N E+YIH AI + +++ LK E+ N R++
Sbjct: 319 NPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLK 363
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 253 (94.1 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 59/165 (35%), Positives = 96/165 (58%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I+Q Y+ E+ K+ TL LYG L++ ++IF TR + M+ + TV+++ G
Sbjct: 287 IKQLYLDCASEEDKYRTLVQLYGLLTVGSSIIFVKTRASAVEIERRMVAEGHTVASLTGG 346
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS-----NR------E 172
++ + RD I+ QFR+G ++VLITT++LARGIDV VS+VINYD+P NR +
Sbjct: 347 IEGSQRDQIIDQFRAGHAKVLITTNVLARGIDVSTVSMVINYDIPELHQPPNRPRQADFQ 406
Query: 173 NYIHXXXXXXXXXXXXVAINFVT-AEDKRTLKDTEQFYNTRIEEM 216
Y+H V+I+FV+ E+ L ++++NT I+ +
Sbjct: 407 TYLHRIGRTGRFGRVGVSISFVSNREEWEMLNQIQKYFNTDIQRI 451
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 48/70 (68%), Positives = 57/70 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 231 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 290
Query: 111 LKKEFTVSAM 120
++FTVSAM
Sbjct: 291 HARDFTVSAM 300
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 251 (93.4 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 51/157 (32%), Positives = 87/157 (55%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
+ Q+Y +++ E K L L+ L I Q++IFCN+ +V+ L + + + ++ H
Sbjct: 256 VTQYYAFVD-ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAK 314
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q+ R+ + FR+G R L+ +DLL RGID+Q V++VIN+D P N E Y+H
Sbjct: 315 MLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR 374
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AI+F++ D+ L E T I+ +P ++
Sbjct: 375 FGHRGLAISFISWADRFNLYRIENELGTEIQPIPPSI 411
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 252 (93.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 53/166 (31%), Positives = 89/166 (53%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFT 116
VG + I Q +Y+E +D K L DL + +IF T+R D LT+ ++ + F
Sbjct: 367 VGSTSENITQKVLYVENQDKK-SALLDLLSASTDGLTLIFVETKRMADQLTDFLIMQNFR 425
Query: 117 VSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH 176
+A+HGD Q+ R+ + FRSG++ +L+ T + ARG+D+ V+ VINYDLPS+ ++Y+H
Sbjct: 426 ATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVH 485
Query: 177 XXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
+A F +E+ +K + +E+P + D
Sbjct: 486 RIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKD 531
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 248 (92.4 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 59/157 (37%), Positives = 88/157 (56%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I+Q Y+ + E KFD L +LYG ++I ++IF T++ + L + + VS +HGD
Sbjct: 304 IKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGD 363
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS--NRE----NYIHX 177
+ RD ++ FR G S+VLITT++LARGID+ VS+V+NYDLP+ N + YIH
Sbjct: 364 LQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHR 423
Query: 178 XXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
VAI+FV ++ + Q Y IE
Sbjct: 424 IGRTGRFGRKGVAISFVHDKNSFNILSAIQKYFGDIE 460
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 246 (91.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 52/154 (33%), Positives = 83/154 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
+ Q+Y +++ E K L L+ L I Q++IFCN+ ++V+ L + + + + +H
Sbjct: 270 VTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAK 328
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R+ + FR G R L+ +DL RGIDVQ V++VIN+D P E Y+H
Sbjct: 329 MAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGR 388
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
+AIN +T ED+ L E+ T I+ +P
Sbjct: 389 FGHLGIAINLITYEDRFDLHRIEKELGTEIKPIP 422
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 243 (90.6 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 56/182 (30%), Positives = 96/182 (52%)
Query: 37 VEACADVDVNAAELRRRVLIVGDSMT--RIRQFYIYIEREDWKFDTLCDLYGTLSITQAV 94
+ A+ +N EL V + MT I+Q+Y+ + E KFD L L + A+
Sbjct: 189 IRRIAERFMNEPEL---VKVKAKEMTVPNIQQYYLEVH-EKKKFDILTRLLDIQAPELAI 244
Query: 95 IFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGI 154
+F T+R+VD L E++ + + +HGD+ Q R ++R+F+ G+ +L+ TD+ ARG+
Sbjct: 245 VFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGL 304
Query: 155 DVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
D+ V+ V N+D+P + E+Y+H VA+ FVT + L E+ ++E
Sbjct: 305 DISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKME 364
Query: 215 EM 216
M
Sbjct: 365 RM 366
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/56 (78%), Positives = 49/56 (87%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M ++FTVSA
Sbjct: 216 IRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA 271
>UNIPROTKB|J3QL52 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
Ensembl:ENST00000582050 Uniprot:J3QL52
Length = 68
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 98 NTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
NTRRKVDWLTE M ++FTVSAMHGDMDQ RDVIMR+FRSGSSRVLITTDLL+
Sbjct: 2 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLS 55
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 213 (80.0 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 42/134 (31%), Positives = 71/134 (52%)
Query: 71 IEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARD 130
+E++D K L + + + ++F T+R+ D LT M + + +HGD Q RD
Sbjct: 311 VEKDD-KLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERD 369
Query: 131 VIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVA 190
++ +F+ G + +LI TD+ +RG+DV+ V VINYD P++ E+YIH A
Sbjct: 370 WVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTA 429
Query: 191 INFVTAEDKRTLKD 204
F T + + + D
Sbjct: 430 YTFFTPNNIKQVND 443
Score = 50 (22.7 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVD 44
VH+N+GA + A N V+ C DV+
Sbjct: 286 VHINIGALELSANHNILQIVDVCHDVE 312
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 213 (80.0 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 42/134 (31%), Positives = 71/134 (52%)
Query: 71 IEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARD 130
+E++D K L + + + ++F T+R+ D LT M + + +HGD Q RD
Sbjct: 319 VEKDD-KLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERD 377
Query: 131 VIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVA 190
++ +F+ G + +LI TD+ +RG+DV+ V VINYD P++ E+YIH A
Sbjct: 378 WVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTA 437
Query: 191 INFVTAEDKRTLKD 204
F T + + + D
Sbjct: 438 YTFFTPNNIKQVND 451
Score = 50 (22.7 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVD 44
VH+N+GA + A N V+ C DV+
Sbjct: 294 VHINIGALELSANHNILQIVDVCHDVE 320
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 211 (79.3 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 264 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 323
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 324 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 376
Score = 50 (22.7 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 219 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 252
>WB|WBGene00011580 [details] [associations]
symbol:ddx-19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007281
"germ cell development" evidence=IGI] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0007281
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00530000063236 HSSP:P10081 EMBL:Z50071
InterPro:IPR025574 Pfam:PF13634 UniGene:Cel.7700 GeneID:174418
KEGG:cel:CELE_T07D4.4 CTD:174418 UCSC:T07D4.4b.1 NextBio:883942
PIR:T24663 RefSeq:NP_495891.1 ProteinModelPortal:Q22308 SMR:Q22308
STRING:Q22308 PRIDE:Q22308 EnsemblMetazoa:T07D4.4a
WormBase:T07D4.4a HOGENOM:HOG000016712 InParanoid:Q22308
OMA:HEGGRFG ArrayExpress:Q22308 Uniprot:Q22308
Length = 1022
Score = 241 (89.9 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 50/110 (45%), Positives = 71/110 (64%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
++ I+QFY+ D K+ + +LY L++ +VIFC+T+ V WL E+M + V
Sbjct: 834 ALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDV 893
Query: 120 MHGDMDQNAR-DVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 168
+HGDM R D I+ F+ G +VLITT++ ARGIDV QVS+VINYDLP
Sbjct: 894 LHGDMTVVERADTIIH-FKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 942
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 211 (79.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 240 (89.5 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 48/133 (36%), Positives = 74/133 (55%)
Query: 91 TQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLL 150
++ +IFC+T+R D L S+ + F +HGD Q RD ++ QFRSG S VLI TD+
Sbjct: 681 SKVIIFCSTKRLCDHLARSV-GRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVA 739
Query: 151 ARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYN 210
ARG+D++ + +VINYD P+ E+Y+H VA F T +D + D +
Sbjct: 740 ARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLE 799
Query: 211 TRIEEMPMNVADL 223
+++P V D+
Sbjct: 800 GANQQVPPQVRDI 812
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 211 (79.3 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q RD ++ +F+ G + +LI TD+ +
Sbjct: 400 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 459
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 460 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 512
Score = 50 (22.7 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 355 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 388
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 234 (87.4 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 47/153 (30%), Positives = 86/153 (56%)
Query: 62 TRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMH 121
T ++Q+ +++ K L L + Q ++F T+ + L +S+++ E + +A+H
Sbjct: 216 TTVKQWICPVDKTQ-KSALLIQLIKQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIH 274
Query: 122 GDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXX 181
G+ Q AR + F+SG RVL+ TD+ ARG+D+ Q+ V+N+DLP+ E+Y+H
Sbjct: 275 GNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRT 334
Query: 182 XXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
A++ V++E+ + LKD E+ N +E
Sbjct: 335 GRAGATGQAVSLVSSEEIKLLKDIERLINRVLE 367
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 235 (87.8 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 51/167 (30%), Positives = 88/167 (52%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFT 116
VG + I Q +Y++ D K L DL +IF T+R D LT+ ++ + F
Sbjct: 379 VGSTSENITQRILYVDDMDKK-SALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFK 437
Query: 117 VSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH 176
+A+HGD Q R+ + F++ + +L+ T + ARG+D+ V+ VINYDLPS+ ++Y+H
Sbjct: 438 ATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVH 497
Query: 177 XXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADL 223
VA +F + ++ +K + N +E+P ++DL
Sbjct: 498 RIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLSDL 544
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 234 (87.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 51/157 (32%), Positives = 85/157 (54%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
I Q ++ + + + K + L + + +IF TR L E + + + S +HGD
Sbjct: 219 IEQRFVQVSQHN-KLEALVRVLEVENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGD 277
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M+Q AR+ + Q ++G +LI TD+ ARG+DV+++ V+NYD+P + E Y+H
Sbjct: 278 MNQQARERAVEQLKNGKLDILIATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGR 337
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AI FVT+ + R L+ E+ N+RI PM V
Sbjct: 338 AGRTGMAILFVTSREMRMLRTIERATNSRIS--PMKV 372
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 230 (86.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 47/158 (29%), Positives = 86/158 (54%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 269 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRA 327
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q+ R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 328 MPQDERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 387
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV+ E D RTL D + + I E+P +
Sbjct: 388 FGTKGLAITFVSDENDARTLNDVQDRFEVNISELPEEI 425
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 233 (87.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 44/133 (33%), Positives = 74/133 (55%)
Query: 91 TQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLL 150
++ +IFC+T+R D LT + L ++F +A+HGD Q RD ++ QFRSG + VL+ TD+
Sbjct: 404 SKVIIFCSTKRMCDQLTRN-LTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVA 462
Query: 151 ARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYN 210
ARG+DV+ + V+NYD P+ E+Y+H A F +D + D +
Sbjct: 463 ARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILE 522
Query: 211 TRIEEMPMNVADL 223
+ +P + ++
Sbjct: 523 GANQRVPPQIREM 535
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 204 (76.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 37/113 (32%), Positives = 61/113 (53%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R+ D LT M + + +HGD Q R ++ +F+ G + +LI TD+ +
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVAS 402
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+YIH A F T + + + D
Sbjct: 403 RGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Score = 50 (22.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 19 VHVNVGA-RIGAGFNADINVEACADVDVNAAELR 51
+H+N+GA + A N V+ C DV+ + +R
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIR 331
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 226 (84.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 46/156 (29%), Positives = 84/156 (53%)
Query: 66 QFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMD 125
Q Y+ ++ +D K L ++ L Q +IF + + L + + + F A+HG ++
Sbjct: 295 QHYVKLQEKD-KTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLE 353
Query: 126 QNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXX 185
Q R +F+ +R+L++TDL RGID+++V++VINYD+P N ++Y+H
Sbjct: 354 QQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFG 413
Query: 186 XXXVAINFVTA-EDKRTLKDTEQFYNTRIEEMPMNV 220
+A+ FV++ ED L + + + I EMP +
Sbjct: 414 TKGLAVTFVSSQEDTLALNEVQTRFEVAISEMPNKI 449
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 226 (84.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 46/156 (29%), Positives = 84/156 (53%)
Query: 66 QFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMD 125
Q Y+ ++ +D K L ++ L Q +IF + + L + + + F A+HG ++
Sbjct: 295 QHYVKLQEKD-KTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLE 353
Query: 126 QNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXX 185
Q R +F+ +R+L++TDL RGID+++V++VINYD+P N ++Y+H
Sbjct: 354 QQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFG 413
Query: 186 XXXVAINFVTA-EDKRTLKDTEQFYNTRIEEMPMNV 220
+A+ FV++ ED L + + + I EMP +
Sbjct: 414 TKGLAVTFVSSQEDTLALNEVQTRFEVAISEMPNKI 449
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 229 (85.7 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDL---YGTLSITQAVIFCNTRRKVDWLTESMLKK 113
VG + I Q Y+E D K L D+ +GT +T +IF T+R D L+E ++ +
Sbjct: 413 VGSTSENITQKVEYVEDHD-KRSVLLDILHTHGTTGLT--LIFVETKRMADALSEFLINQ 469
Query: 114 EFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNREN 173
F +A+HGD Q R+ + FRSG +L+ T + ARG+D+ V+ VINYDLP++ ++
Sbjct: 470 RFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVINYDLPTDIDD 529
Query: 174 YIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
Y+H +A F ++ ++D +E+P
Sbjct: 530 YVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVP 573
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 227 (85.0 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 41/108 (37%), Positives = 69/108 (63%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ +IF +T+R D +T+ + + + A+HGD DQ RD ++++FR+G S +++ TD+ A
Sbjct: 362 KTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAA 421
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDK 199
RGIDV+ ++ VINYD+P N E+Y+H AI+F T ++K
Sbjct: 422 RGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNK 469
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 229 (85.7 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 44/133 (33%), Positives = 75/133 (56%)
Query: 91 TQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLL 150
++ +IFC+T+R D L + L + F +A+HGD Q RD ++ QFRSG + VL+ TD+
Sbjct: 475 SKIIIFCSTKRMCDQLARN-LTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVA 533
Query: 151 ARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYN 210
ARG+DV+ + +V+NYD P+ E+Y+H +A F +D + D +
Sbjct: 534 ARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILE 593
Query: 211 TRIEEMPMNVADL 223
+++P V ++
Sbjct: 594 GANQKVPPQVREM 606
>UNIPROTKB|K9J6N8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00660000095549 EMBL:AAEX03008212
Ensembl:ENSCAFT00000000797 Uniprot:K9J6N8
Length = 310
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 144 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 202
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 203 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 262
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 263 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 297
>UNIPROTKB|H0Y400 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL662847 EMBL:AL662801
EMBL:CR753892 EMBL:BX001040 EMBL:BX248516 EMBL:BX927320
EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B
EMBL:CR942185 EMBL:CT009531 Ensembl:ENST00000412386
Ensembl:ENST00000417023 Ensembl:ENST00000417995
Ensembl:ENST00000422243 Ensembl:ENST00000428107
Ensembl:ENST00000433293 Ensembl:ENST00000445602
Ensembl:ENST00000455400 Uniprot:H0Y400
Length = 187
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 26 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 84
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 85 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 144
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 145 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 179
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 162 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 220
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 221 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 280
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 281 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 315
>UNIPROTKB|J3KTN0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578754
Uniprot:J3KTN0
Length = 117
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 42/60 (70%), Positives = 49/60 (81%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
R+L+ + +T IRQFYI +ERE+WK DTLCDLY TL+ITQAVIF NTRRKVDWLTE M
Sbjct: 56 RILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 115
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 229 (85.7 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 47/136 (34%), Positives = 73/136 (53%)
Query: 91 TQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLL 150
T+ +IF T+++VD +T ++ ++ + A+HGD Q RD ++ FR+G +L+ TD+
Sbjct: 405 TKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVA 464
Query: 151 ARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVT------AEDK-RTLK 203
ARG+DV V VINYD PSN E+Y+H A T A D + L+
Sbjct: 465 ARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLR 524
Query: 204 DTEQFYNTRIEEMPMN 219
+ Q N ++ M MN
Sbjct: 525 EANQTINPKLMNMAMN 540
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 211 (79.3 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 47/166 (28%), Positives = 82/166 (49%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQ-----AVIFCNTRRKVDWLTESML 111
VG S I Q +++ D K L DL TQ ++F T+R D L +
Sbjct: 371 VGSSTDLITQRVEFVQESD-KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLC 429
Query: 112 KKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR 171
EF +++HGD Q R+V +R F++G + +L+ TD+ ARG+D+ V+ V+N+DLP++
Sbjct: 430 MNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDI 489
Query: 172 ENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
++Y+H +A F + + + + +E+P
Sbjct: 490 DDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVP 535
Score = 39 (18.8 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 10 PP---GHGACADVHVNVGARIGAGFNA 33
PP G GA + N G R G G+ A
Sbjct: 58 PPSSGGGGASGGGYRNDGGRTGYGYGA 84
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 227 (85.0 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFT 116
VG + I Q +Y+E +D K + DL ++F T+R D L + + + F
Sbjct: 411 VGSTSENITQKILYVE-DDEKKSVILDLLSANENGLTIVFTETKRMADNLADYLYDQGFP 469
Query: 117 VSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH 176
+A+HGD Q R+ + F++G++ +L+ T + ARG+D+ VS VINYDLPS+ ++Y+H
Sbjct: 470 ATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVH 529
Query: 177 XXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
+A F +K +K + + +E+P
Sbjct: 530 RIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQEVP 570
>UNIPROTKB|B4DP52 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471081
GO:GO:0003676 EMBL:AL662847 EMBL:AL662801 EMBL:CR753892
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
EMBL:AK298194 IPI:IPI00792043 SMR:B4DP52 STRING:B4DP52
Ensembl:ENST00000415382 Ensembl:ENST00000548499
Ensembl:ENST00000548770 Ensembl:ENST00000549326
Ensembl:ENST00000549433 Ensembl:ENST00000551056
Ensembl:ENST00000552079 UCSC:uc011dnn.2 Uniprot:B4DP52
Length = 350
Score = 218 (81.8 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 184 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 242
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 243 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 302
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 303 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 337
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 221 (82.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 66 QFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMD 125
Q YI + + K L DL L Q VIF + + L + +++ F +H M
Sbjct: 265 QHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Query: 126 QNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXX 185
Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+P + + Y+H
Sbjct: 324 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
Query: 186 XXXVAINFV-TAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV +A D L ++ + I+E+P +
Sbjct: 384 TKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 419
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 221 (82.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 47/148 (31%), Positives = 78/148 (52%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNA 128
+Y + K + L +L G + Q ++F TR D L + + +HG+ Q +
Sbjct: 223 VYPVEQRRKRELLSELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGS 282
Query: 129 RDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXX 188
R +R+F SG RVL+ T++ ARG+D+ + V+N+DLP E+Y+H
Sbjct: 283 RRRALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSG 342
Query: 189 VAINFVTAEDKRTLKDTEQFYNTRIEEM 216
VAI+FV+ E++RTL D E+ +I +
Sbjct: 343 VAISFVSREEERTLADIEKLIGQKIRRI 370
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNA 128
+Y D K + + L + + Q +IF T++ VD LT + K + HGD+ Q A
Sbjct: 224 VYAIDSDRKTEFVSHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGA 283
Query: 129 RDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXX 188
R+ ++++F+ G +VL+ TD+ ARG+D+ ++ VIN++LP E+YIH
Sbjct: 284 REKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAG 343
Query: 189 VAINFVTAEDKRTLKDTEQFYNTRIEE 215
+AI + ED L++ E + R+ +
Sbjct: 344 LAITLFSQEDALLLEEVETLLDKRLPQ 370
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNA 128
+Y D K + + L + + Q +IF T++ VD LT + K + HGD+ Q A
Sbjct: 224 VYAIDSDRKTEFVSHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGA 283
Query: 129 RDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXX 188
R+ ++++F+ G +VL+ TD+ ARG+D+ ++ VIN++LP E+YIH
Sbjct: 284 REKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAG 343
Query: 189 VAINFVTAEDKRTLKDTEQFYNTRIEE 215
+AI + ED L++ E + R+ +
Sbjct: 344 LAITLFSQEDALLLEEVETLLDKRLPQ 370
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 45/148 (30%), Positives = 80/148 (54%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFT 116
VG + I+Q +++E E+ K + L +L + ++F T+RK D + + ++
Sbjct: 613 VGSTNEYIKQNLVFVEEEN-KCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLN 671
Query: 117 VSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH 176
+HGD Q+ R+ ++ F+ G +L+ TD+ ARG+D+ + VIN+DLPSN ++YIH
Sbjct: 672 AVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIH 731
Query: 177 XXXXXXXXXXXXVAINFVTAEDKRTLKD 204
+A +FV ++K KD
Sbjct: 732 RIGRTGRAGNIGIATSFVNEDNKNIFKD 759
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 45/148 (30%), Positives = 80/148 (54%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFT 116
VG + I+Q +++E E+ K + L +L + ++F T+RK D + + ++
Sbjct: 613 VGSTNEYIKQNLVFVEEEN-KCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLN 671
Query: 117 VSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH 176
+HGD Q+ R+ ++ F+ G +L+ TD+ ARG+D+ + VIN+DLPSN ++YIH
Sbjct: 672 AVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIH 731
Query: 177 XXXXXXXXXXXXVAINFVTAEDKRTLKD 204
+A +FV ++K KD
Sbjct: 732 RIGRTGRAGNIGIATSFVNEDNKNIFKD 759
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 223 (83.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 44/138 (31%), Positives = 76/138 (55%)
Query: 86 GTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLI 145
G S + +IF T+R D +T + + + ++HGD QN RD ++ QF++G S +++
Sbjct: 370 GKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMV 429
Query: 146 TTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDT 205
TD+ +RGIDV+ ++ V+NYD P+N E+YIH AI F T E+ + +D
Sbjct: 430 ATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDL 489
Query: 206 EQFYNTRIEEMPMNVADL 223
+E+ +A++
Sbjct: 490 LGVLQEAKQEIDPRLAEM 507
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 225 (84.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/145 (35%), Positives = 75/145 (51%)
Query: 81 LCDLYGTL-SITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSG 139
L D+Y T S + +IF T+R+VD L + A+HGD Q+ RD ++R+FRSG
Sbjct: 520 LSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSG 579
Query: 140 SSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVT---A 196
S +L+ TD+ ARG+DV + VIN+D P N E+YIH + F T A
Sbjct: 580 KSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNA 639
Query: 197 EDKRTLKDTEQFYNTRIEEMPMNVA 221
+ + L D + N I N+A
Sbjct: 640 KQAKALVDVLREANQEINPALENLA 664
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 223 (83.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/154 (27%), Positives = 80/154 (51%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNA 128
+Y + K L ++ T +IF T+ + L + + + FT +++ G++ QN
Sbjct: 218 VYPVKNHQKTPLLIEILKTTETKSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNR 277
Query: 129 RDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXX 188
R +M FR G+ ++L+ TD+ ARG+D+ +S VINYD+P E+Y H
Sbjct: 278 RHAVMEGFRRGNFKILVATDIAARGLDIDHISHVINYDMPDTPEDYTHRIGRTGRFDRTG 337
Query: 189 VAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVAD 222
A++ VT D ++D ++ N+ I+ + ++ D
Sbjct: 338 QALSLVTGRDGDMVRDIQKLINSPIQRLRVDGFD 371
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 223 (83.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 41/132 (31%), Positives = 72/132 (54%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ +IF T+RK D LT +M + + +HGD +Q RD ++++F++G + +++ TD+ A
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAA 437
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNT 211
RG+DV + VINYD P+N E+Y+H A F T + KD + +
Sbjct: 438 RGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDE 497
Query: 212 RIEEMPMNVADL 223
+ +P + D+
Sbjct: 498 AKQTVPQALRDM 509
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 221 (82.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 66 QFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMD 125
Q YI + + K L DL L Q VIF + + L + +++ F +H M
Sbjct: 324 QHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 382
Query: 126 QNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXX 185
Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+P + + Y+H
Sbjct: 383 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 442
Query: 186 XXXVAINFV-TAEDKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV +A D L ++ + I+E+P +
Sbjct: 443 TKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 478
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 220 (82.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 45/155 (29%), Positives = 81/155 (52%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+YI +E + K L L L Q +IF + + + LT+ + F +HG
Sbjct: 281 LQQYYIKLEERE-KNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGH 339
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R + F+ R+ ++TD+ RGID+++++L INYDL + + Y+H
Sbjct: 340 MKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGR 399
Query: 184 XXXXXVAINFVTA-EDKRTLKDTEQFYNTRIEEMP 217
+AI+FV++ ED+ L ++ ++ +I E P
Sbjct: 400 FGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFP 434
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 50/178 (28%), Positives = 91/178 (51%)
Query: 41 ADVDVNAAELRRRVLIVGDSMTR----IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIF 96
A ++ A + R L++ T IRQ++ +E + + L L T +V+F
Sbjct: 190 ASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQPTSSVVF 249
Query: 97 CNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDV 156
CNT+R+V + +++ + F+V +HGDM+Q RD + QF + S +L+ TD+ ARG+DV
Sbjct: 250 CNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAARGLDV 309
Query: 157 QQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
+ V NYDL + E ++H +A +F + + + +++ + IE
Sbjct: 310 DNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMDIAIE 367
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 219 (82.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 45/158 (28%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 261 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 219 (82.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 46/153 (30%), Positives = 85/153 (55%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ I E K L +L +L QAVIF + R+ D L + + F +H D
Sbjct: 265 LQQYYVPITEEQ-KNKKLIELLDSLDFNQAVIFVKSVRRADALNKILQDIGFPSICIHRD 323
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
+DQ R R+F++ SR+++ T++ RGID+++V++VINYD+ + + Y+H
Sbjct: 324 LDQKDRIEQYRKFKNFESRIMVATNIFGRGIDIERVNVVINYDMAESADTYLHRVGRAGR 383
Query: 184 XXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
+AI+FV +++ L+ + + I+E+
Sbjct: 384 FGTKGLAISFVPSKEDPVLEQVQSKFVVSIKEL 416
>UNIPROTKB|F8W0J0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 HGNC:HGNC:13917 ChiTaRS:DDX39B
EMBL:CT009531 IPI:IPI00893580 ProteinModelPortal:F8W0J0 SMR:F8W0J0
Ensembl:ENST00000552820 ArrayExpress:F8W0J0 Uniprot:F8W0J0
Length = 183
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 45/156 (28%), Positives = 84/156 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 16 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 74
Query: 124 MDQNARDVIM-RQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
M Q R + +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 75 MPQEERWLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAG 134
Query: 183 XXXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 135 RFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 170
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 219 (82.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 46/154 (29%), Positives = 80/154 (51%)
Query: 63 RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+I+Q +Y E+ K + L +L G + Q ++F T+ + L + + + HG
Sbjct: 235 KIKQA-VYWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHG 293
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
D Q AR+ + QF G RVL+ TD+ ARG+D+ ++ V+N+ LP E+Y+H
Sbjct: 294 DKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTG 353
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
AI+ V+ +D+R L++ EQ + E +
Sbjct: 354 RAGKSGTAISLVSPKDERFLENIEQLIERKFERI 387
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/158 (27%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 261 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+A+ FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/158 (27%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q +IF + ++ L + ++++ F A+H
Sbjct: 261 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/158 (27%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 261 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+A+ FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/158 (27%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 261 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+A+ FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 218 (81.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 262 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 320
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 381 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 219 (82.2 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 45/158 (28%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 309 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 367
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 368 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 427
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV+ E D + L D + + + E+P +
Sbjct: 428 FGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEI 465
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 219 (82.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 45/136 (33%), Positives = 70/136 (51%)
Query: 73 REDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVI 132
RE+ K L D+ + +IFC T+ VD + + + + +HG M Q R +
Sbjct: 225 REEEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGV 284
Query: 133 MRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAIN 192
M FR G R L+ TD+ ARGID+ ++ VINYD+P +E+Y+H AI
Sbjct: 285 MDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAIT 344
Query: 193 FVTAEDKRTLKDTEQF 208
F+T + R L++ E +
Sbjct: 345 FITPYEDRFLEEIEAY 360
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 219 (82.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 45/136 (33%), Positives = 70/136 (51%)
Query: 73 REDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVI 132
RE+ K L D+ + +IFC T+ VD + + + + +HG M Q R +
Sbjct: 225 REEEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGV 284
Query: 133 MRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAIN 192
M FR G R L+ TD+ ARGID+ ++ VINYD+P +E+Y+H AI
Sbjct: 285 MDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAIT 344
Query: 193 FVTAEDKRTLKDTEQF 208
F+T + R L++ E +
Sbjct: 345 FITPYEDRFLEEIEAY 360
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 218 (81.8 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ + +++ K L DL L Q VIF + ++ L + ++++ F A+H
Sbjct: 277 LQQYYVKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRG 335
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++ NYD+P + + Y+H
Sbjct: 336 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 395
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMP 217
+AI FV+ E D + L D + + I E+P
Sbjct: 396 FGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 430
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 217 (81.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 45/158 (28%), Positives = 85/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y + +++ K L DL L Q VIF + ++ L++ ++++ F A+H
Sbjct: 261 LQQYYCKL-KDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 216 (81.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYG-TLSITQAVIFCNTRRKVDWLTESMLKKEF 115
VG + I Q +++E D K L D+ G T S + ++F T++ D L + + + +
Sbjct: 153 VGSTSENITQKVVWVEDLD-KRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGY 211
Query: 116 TVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYI 175
+++HGD Q R+ + QFRSG S +L+ T + ARG+D+ V VIN+DLPS+ E Y+
Sbjct: 212 ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYV 271
Query: 176 HXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
H +A +F ++ KD +E+P
Sbjct: 272 HRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 313
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 216 (81.1 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 47/146 (32%), Positives = 73/146 (50%)
Query: 63 RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+I Q+ + +D KF LC L + +A++F TR V L +L+ + M G
Sbjct: 218 KIHQWIHLADDKDHKFALLCHLLKQEDVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRG 277
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
DM+Q R + +F G VL+ TD+ ARGID+ +S VIN+D+P + + YIH
Sbjct: 278 DMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTG 337
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQF 208
AI+ A D R + E++
Sbjct: 338 RAGAKGTAISLAEAHDMRIVGKIERY 363
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 216 (81.1 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 47/146 (32%), Positives = 73/146 (50%)
Query: 63 RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
+I Q+ + +D KF LC L + +A++F TR V L +L+ + M G
Sbjct: 218 KIHQWIHLADDKDHKFALLCHLLKQEDVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRG 277
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
DM+Q R + +F G VL+ TD+ ARGID+ +S VIN+D+P + + YIH
Sbjct: 278 DMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTG 337
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQF 208
AI+ A D R + E++
Sbjct: 338 RAGAKGTAISLAEAHDMRIVGKIERY 363
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 223 (83.6 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 46/159 (28%), Positives = 84/159 (52%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQ----AVIFCNTRRKVDWLTESMLKKEFTVSAMHGDM 124
+ + E+ KF L +L G L Q ++F + + D L ++K+ +T +++HG
Sbjct: 643 VEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGK 702
Query: 125 DQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXX 184
DQ+ RD + +++G VLI T ++ARG+DV+ + LV+NYD P++ E+Y+H
Sbjct: 703 DQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRA 762
Query: 185 XXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADL 223
VA+ F+T E ++ D + + +P + L
Sbjct: 763 GHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTL 801
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 217 (81.4 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 51/142 (35%), Positives = 83/142 (58%)
Query: 60 SMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSA 119
S+ +I Q++I ED K L D+YG +S+ Q+++F +T + + M+ + +VS
Sbjct: 277 SVEKIHQYFIDCGSEDNKALILSDIYGFISVGQSIVFVHTIATAKSVHQKMVDEGHSVSL 336
Query: 120 MHG-DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRE------ 172
++G D+ R ++ F+ G S+VLITT++LARGID+ QVSLVINYD+P +
Sbjct: 337 LYGKDLTTEERFKQIKDFKDGKSKVLITTNVLARGIDIPQVSLVINYDVPLDEMGKPDPV 396
Query: 173 NYIHXXXXXXXXXXXXVAINFV 194
+Y+H VA++FV
Sbjct: 397 HYLHRIGRVGRFGRSGVALSFV 418
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 215 (80.7 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 45/156 (28%), Positives = 82/156 (52%)
Query: 53 RVLIVGDSMT--RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESM 110
++ I +++T + Q ++++ + K L ++ + +IFC T+ D + +++
Sbjct: 207 KIQITAETVTIDLVNQSVYHLDKSN-KVPLLFNILTKADYEKVLIFCKTKYGADIIVKAL 265
Query: 111 LKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 170
K T +++H Q R+ ++ F+ + RVL+ TD+ ARGIDV ++LVINY+LP +
Sbjct: 266 EKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAARGIDVDNITLVINYNLPED 325
Query: 171 RENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTE 206
NYIH +AI+F D R L + E
Sbjct: 326 PRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIE 361
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 216 (81.1 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 50/185 (27%), Positives = 93/185 (50%)
Query: 31 FNADINVEACADVDVNAAELRRRVLIVGDSMT--RIRQFYIYIEREDWKFDTLCDLYGTL 88
F+A +N + ++ + +V + + MT R+ Q ++ R++ KF L L
Sbjct: 187 FSATLN-QRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKE-KFPLLLGLLRKE 244
Query: 89 SITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTD 148
+ + +IF NT+R+ ++L E + +F + GD++Q R I+ F+SG ++I TD
Sbjct: 245 GMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATD 304
Query: 149 LLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQF 208
+ +RG+ + VS VINYDLP + E+Y+H AI+ + L+ ++
Sbjct: 305 VASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGAFHLEAIHEY 364
Query: 209 YNTRI 213
+I
Sbjct: 365 IKDKI 369
>UNIPROTKB|I3LSI9 [details] [associations]
symbol:I3LSI9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA]
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000023959
Uniprot:I3LSI9
Length = 65
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 53 RVLIVGDSMTR--IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDW 105
R+L+ D +T I+QF++ +ERE+WKFDTLCDLY TL+ITQAVIFCNT+RKVDW
Sbjct: 11 RILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDW 65
>GENEDB_PFALCIPARUM|PF14_0563 [details] [associations]
symbol:PF14_0563 "DEAD-box RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 KO:K01509 RefSeq:XP_001348737.1
ProteinModelPortal:Q8IKP1 PRIDE:Q8IKP1
EnsemblProtists:PF14_0563:mRNA GeneID:812145 KEGG:pfa:PF14_0563
EuPathDB:PlasmoDB:PF3D7_1459000 HOGENOM:HOG000281979 OMA:DKKQPDD
ProtClustDB:CLSZ2501093 Uniprot:Q8IKP1
Length = 741
Score = 145 (56.1 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 168
MD RD +M F+ G S+VLI TDLL+RGIDV +SLVIN+DLP
Sbjct: 615 MDPKTRDTLMADFKKGISKVLICTDLLSRGIDVPSISLVINFDLP 659
Score = 86 (35.3 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ E ++ K+ L +LY +++I+Q VIF N+++ L M + V+ + D
Sbjct: 537 VKQYYLITENDEQKYYYLSELYCSMTISQCVIFVNSKKSAYNLYNFMTENSHNVTLICAD 596
Score = 67 (28.6 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N E YIH +AINF++ +K E++Y I ++
Sbjct: 679 NMETYIHRIGRTGRFGTKGMAINFISKNQMSHIKQIEEYYKCSIADL 725
Score = 49 (22.3 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 81 LCDLYGTLSITQAVIFCNTR 100
LC + TLS QAV C TR
Sbjct: 385 LCKINRTLSSLQAVCICPTR 404
>UNIPROTKB|Q8IKP1 [details] [associations]
symbol:PF14_0563 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 KO:K01509 RefSeq:XP_001348737.1
ProteinModelPortal:Q8IKP1 PRIDE:Q8IKP1
EnsemblProtists:PF14_0563:mRNA GeneID:812145 KEGG:pfa:PF14_0563
EuPathDB:PlasmoDB:PF3D7_1459000 HOGENOM:HOG000281979 OMA:DKKQPDD
ProtClustDB:CLSZ2501093 Uniprot:Q8IKP1
Length = 741
Score = 145 (56.1 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 168
MD RD +M F+ G S+VLI TDLL+RGIDV +SLVIN+DLP
Sbjct: 615 MDPKTRDTLMADFKKGISKVLICTDLLSRGIDVPSISLVINFDLP 659
Score = 86 (35.3 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ E ++ K+ L +LY +++I+Q VIF N+++ L M + V+ + D
Sbjct: 537 VKQYYLITENDEQKYYYLSELYCSMTISQCVIFVNSKKSAYNLYNFMTENSHNVTLICAD 596
Score = 67 (28.6 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEM 216
N E YIH +AINF++ +K E++Y I ++
Sbjct: 679 NMETYIHRIGRTGRFGTKGMAINFISKNQMSHIKQIEEYYKCSIADL 725
Score = 49 (22.3 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 81 LCDLYGTLSITQAVIFCNTR 100
LC + TLS QAV C TR
Sbjct: 385 LCKINRTLSSLQAVCICPTR 404
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 214 (80.4 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 44/158 (27%), Positives = 84/158 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q+Y+ ++ + K L DL L Q VIF + + L++ ++++ F A+H
Sbjct: 261 LQQYYVKLKDSE-KNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRG 319
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 320 MTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+A+ FV+ E D + L D + + + E+P +
Sbjct: 380 FGTKGLAVIFVSDETDAKILNDVQDRFEVNVAELPEEI 417
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 218 (81.8 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSIT-QAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
++Q +E + KF+T+ +S T + +IFC + + D L+ + F +HG
Sbjct: 502 VKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHG 561
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
+ DQ R+ + +SG R+L+ TD+ +RG+D++ ++ VINYD P N E Y+H
Sbjct: 562 NRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTG 621
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
+I+F T ED K+ + +E+P
Sbjct: 622 RAGRQGTSISFFTREDWAMAKELIEILQEAEQEVP 656
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 214 (80.4 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 43/122 (35%), Positives = 70/122 (57%)
Query: 93 AVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLAR 152
AVIFC T+ + L +++ + + +HGD+ Q R+ +M+ FR + LI TD+ AR
Sbjct: 247 AVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAAR 306
Query: 153 GIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTR 212
G+DV V+ V NYD+P + E+YIH +AI FV A+D++ L++ E+
Sbjct: 307 GLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAP 366
Query: 213 IE 214
I+
Sbjct: 367 IQ 368
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 214 (80.4 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 43/122 (35%), Positives = 70/122 (57%)
Query: 93 AVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLAR 152
AVIFC T+ + L +++ + + +HGD+ Q R+ +M+ FR + LI TD+ AR
Sbjct: 247 AVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAAR 306
Query: 153 GIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTR 212
G+DV V+ V NYD+P + E+YIH +AI FV A+D++ L++ E+
Sbjct: 307 GLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAP 366
Query: 213 IE 214
I+
Sbjct: 367 IQ 368
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 220 (82.5 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 50/148 (33%), Positives = 79/148 (53%)
Query: 56 IVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTL----SITQAVIFCNTRRKVDWLTESML 111
+V +T+I + I E KF+ L +L G L +++IF + K D L +L
Sbjct: 594 VVASEITQI----VEIRDEKSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELLRELL 649
Query: 112 KKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR 171
+K + ++HG DQ RD + F+SG V+I T + ARG+DV+Q+ LV+NYD P++
Sbjct: 650 RKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHL 709
Query: 172 ENYIHXXXXXXXXXXXXVAINFVTAEDK 199
E+Y+H A+ FVT E +
Sbjct: 710 EDYVHRAGRTGRAGNTGTAVTFVTEEQE 737
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 213 (80.0 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 45/158 (28%), Positives = 83/158 (52%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q Y+ ++ + K L +L L Q VIF ++ + L + + ++ F A+H
Sbjct: 258 LQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQ 316
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R + F+ R+L+ TDL RG+D+++V++V NYD+P + ++Y+H
Sbjct: 317 MAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGR 376
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNV 220
+AI FV+ E D +TL + ++ I E+P +
Sbjct: 377 FGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKI 414
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 203 (76.5 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 41/132 (31%), Positives = 75/132 (56%)
Query: 94 VIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARG 153
+IF TR + E + + + A++GD++Q R+ + Q +SG S +L+ TD++ARG
Sbjct: 258 IIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVARG 317
Query: 154 IDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRI 213
+D+ ++SLVINYDLP + E Y+H ++I FV + +++ E+ N +
Sbjct: 318 LDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAFVRPREMYSIRHYERLTNGTV 377
Query: 214 --EEMPMNVADL 223
++P N+ D+
Sbjct: 378 LNYDLP-NIQDI 388
Score = 36 (17.7 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 3 ELQMVCYPPGHGACADVHVNVGARIGAGFNADINVEACADVDVNAAELRRRVLIVGDSMT 62
++Q + PP A V A+ G G A + A A +D + + +++++ +
Sbjct: 40 DIQALTIPP---LLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIK--KPQLMVLAPTRE 94
Query: 63 RIRQFYIYIER--EDWKFDTLCDLYG 86
Q IE +D K + LYG
Sbjct: 95 LAMQVAEAIESFGKDMKGLRVATLYG 120
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 216 (81.1 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 48/162 (29%), Positives = 82/162 (50%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQ-AVIFCNTRRKVDWLTESMLKKEF 115
VG + I Q +++E + K L D+ TL +IF T+R D LT+ +L F
Sbjct: 397 VGSTSENITQKVVHVEDSE-KRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNF 455
Query: 116 TVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYI 175
+++HGD Q R+ + FRSG + +++ T + +RG+D+ V+ VINYDLP++ ++Y+
Sbjct: 456 PATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYV 515
Query: 176 HXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
H A+ F +K K+ + +E P
Sbjct: 516 HRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECP 557
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 217 (81.4 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 50 LRRRVLI-VGDS--MTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWL 106
LR V++ +G + T + ++ + +E KF L L L A++F NT++ D +
Sbjct: 533 LRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSI 592
Query: 107 TESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYD 166
+++ K + V+ +HG Q R++ + FR+ VL+ TD++ RGID+ V+ VINYD
Sbjct: 593 AKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYD 652
Query: 167 LPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVA 221
+P + E Y H VA +F+T D D +Q +P +A
Sbjct: 653 MPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELA 707
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 212 (79.7 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 46/161 (28%), Positives = 86/161 (53%)
Query: 64 IRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGD 123
++Q Y+ + +E+ K L +L L Q VIF + ++ L++ + ++ F +H
Sbjct: 259 LQQHYVNL-KENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRG 317
Query: 124 MDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXX 183
M Q R +QF+ R+L+ T+L RG+D+++V++V NYD+P + + Y+H
Sbjct: 318 MTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 377
Query: 184 XXXXXVAINFVTAE-DKRTLKDTEQFYNTRIEEMPMNVADL 223
+AI FV+ E D + L + + ++ I E+P + DL
Sbjct: 378 FGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEI-DL 417
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 216 (81.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYG-TLSITQAVIFCNTRRKVDWLTESMLKKEF 115
VG + I Q +++E D K L D+ G T S + ++F T++ D L + + + +
Sbjct: 403 VGSTSENITQKVVWVEDLD-KRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGY 461
Query: 116 TVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYI 175
+++HGD Q R+ + QFRSG S +L+ T + ARG+D+ V VIN+DLPS+ E Y+
Sbjct: 462 ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYV 521
Query: 176 HXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
H +A +F ++ KD +E+P
Sbjct: 522 HRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 563
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 216 (81.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYG-TLSITQAVIFCNTRRKVDWLTESMLKKEF 115
VG + I Q +++E D K L D+ G T S + ++F T++ D L + + + +
Sbjct: 406 VGSTSENITQKVVWVEDLD-KRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGY 464
Query: 116 TVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYI 175
+++HGD Q R+ + QFRSG S +L+ T + ARG+D+ V VIN+DLPS+ E Y+
Sbjct: 465 ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYV 524
Query: 176 HXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
H +A +F ++ KD +E+P
Sbjct: 525 HRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 566
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 212 (79.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 55/179 (30%), Positives = 87/179 (48%)
Query: 41 ADVDVNAAELR---RRVLI-VGDSMTR-IRQFYIYIEREDWKFDTLCDLYGTLSITQAVI 95
ADV+ A EL +R+ I VG + I Q + + D K L + Q +I
Sbjct: 196 ADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILADAEYRQVII 255
Query: 96 FCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGID 155
F TR D LTE + + A+ G+++Q R+ IM QF ++L+TTD+ +RG+D
Sbjct: 256 FTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVTTDVASRGLD 315
Query: 156 VQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
+ V+ VIN+D+P + E Y+H A++ V +D + K E F I+
Sbjct: 316 IPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKRVEAFLQQEIQ 374
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 212 (79.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 55/179 (30%), Positives = 87/179 (48%)
Query: 41 ADVDVNAAELR---RRVLI-VGDSMTR-IRQFYIYIEREDWKFDTLCDLYGTLSITQAVI 95
ADV+ A EL +R+ I VG + I Q + + D K L + Q +I
Sbjct: 196 ADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILADAEYRQVII 255
Query: 96 FCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGID 155
F TR D LTE + + A+ G+++Q R+ IM QF ++L+TTD+ +RG+D
Sbjct: 256 FTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVTTDVASRGLD 315
Query: 156 VQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIE 214
+ V+ VIN+D+P + E Y+H A++ V +D + K E F I+
Sbjct: 316 IPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKRVEAFLQQEIQ 374
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 37/133 (27%), Positives = 75/133 (56%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ ++F T+R D +T + + + ++HGD Q RD ++ +F++G S +++ TD+ +
Sbjct: 389 KCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVAS 448
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNT 211
RGIDV+ ++ VINYD P+N E+Y+H AI F T ++ + +D +
Sbjct: 449 RGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTILSE 508
Query: 212 RIEEMPMNVADLI 224
+++ +A+++
Sbjct: 509 AKQQIDPRLAEMV 521
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNA 128
+Y D K + L G+ + Q ++F T++ D L + M K A+HGD Q A
Sbjct: 225 VYGVDADRKRELTSFLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGA 284
Query: 129 RDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXX 188
R+ + +F+ G R LI TD+ ARGID++ +S VINY+LP N E+Y+H
Sbjct: 285 REKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSG 344
Query: 189 VAINFVTAEDKRTLKDTEQFYNTRI 213
+A++ V+ ++ L E+ + ++
Sbjct: 345 LAVSLVSPGEEWLLTAIEELLDIQL 369
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 69 IYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNA 128
+Y D K + L G+ + Q ++F T++ D L + M K A+HGD Q A
Sbjct: 225 VYGVDADRKRELTSFLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGA 284
Query: 129 RDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXX 188
R+ + +F+ G R LI TD+ ARGID++ +S VINY+LP N E+Y+H
Sbjct: 285 REKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSG 344
Query: 189 VAINFVTAEDKRTLKDTEQFYNTRI 213
+A++ V+ ++ L E+ + ++
Sbjct: 345 LAVSLVSPGEEWLLTAIEELLDIQL 369
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 218 (81.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 52/175 (29%), Positives = 90/175 (51%)
Query: 56 IVGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSIT------QAVIFCNTRRKVDWLTES 109
+V +T+I + + E+ KF L +L G L T +++IF + + D L
Sbjct: 757 VVAPEITQI----VEVCNEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLRE 812
Query: 110 MLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS 169
+++K + ++HG DQ RD + F++G VLI T + ARG+DV+Q+ LV+NYD P+
Sbjct: 813 LMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPN 872
Query: 170 NRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMPMNVADLI 224
+ E+Y+H A+ F+T + +R D + +E+P V L+
Sbjct: 873 HLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKLV 927
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 210 (79.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 42/151 (27%), Positives = 81/151 (53%)
Query: 63 RIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHG 122
++ Q +++++ K + L + G + Q ++F T+ + L E + K +A+HG
Sbjct: 219 QVTQHVHFVDKKR-KRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHG 277
Query: 123 DMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXX 182
+ Q AR + F+SG RVL+ TD+ ARG+D++++ V+NY+LP+ E+Y+H
Sbjct: 278 NKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTG 337
Query: 183 XXXXXXVAINFVTAEDKRTLKDTEQFYNTRI 213
A++ V ++ + L+D E+ I
Sbjct: 338 RAAATGEALSLVCVDEHKLLRDIEKLLKKEI 368
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 209 (78.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/150 (29%), Positives = 79/150 (52%)
Query: 66 QFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMD 125
Q +Y + K + L L G+ + Q ++F TR+ D L E + +++GD
Sbjct: 227 QQMVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKS 286
Query: 126 QNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXX 185
Q AR + F++G R LI TD+ ARG+D+ Q+ V+NYD+P E+Y+H
Sbjct: 287 QGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAG 346
Query: 186 XXXVAINFVTAEDKRTLKDTEQFYNTRIEE 215
+A++ ++ +++ L+ E+ NTR+ +
Sbjct: 347 LAGLAVSLLSHDEQPQLEAIERLLNTRLPQ 376
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 209 (78.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/150 (29%), Positives = 79/150 (52%)
Query: 66 QFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMD 125
Q +Y + K + L L G+ + Q ++F TR+ D L E + +++GD
Sbjct: 227 QQMVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKS 286
Query: 126 QNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXX 185
Q AR + F++G R LI TD+ ARG+D+ Q+ V+NYD+P E+Y+H
Sbjct: 287 QGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAG 346
Query: 186 XXXVAINFVTAEDKRTLKDTEQFYNTRIEE 215
+A++ ++ +++ L+ E+ NTR+ +
Sbjct: 347 LAGLAVSLLSHDEQPQLEAIERLLNTRLPQ 376
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 213 (80.0 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 49/162 (30%), Positives = 80/162 (49%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYG-TLSITQAVIFCNTRRKVDWLTESMLKKEF 115
VG + I Q +++E D K L DL T + ++F T++ D L + + + +
Sbjct: 408 VGSTSENITQKVVWVEESD-KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY 466
Query: 116 TVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYI 175
+++HGD Q R+ + QFRSG S +L+ T + ARG+D+ V VIN+DLPS+ E Y+
Sbjct: 467 ACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYV 526
Query: 176 HXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
H +A +F + KD +E+P
Sbjct: 527 HRIGRTGRVGNLGLATSFFNERNANITKDLLDLLVEAKQEVP 568
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 213 (80.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ +IF T+++ D LT M + + +HGD Q RD ++ +FRSG + +LI TD+ +
Sbjct: 344 KTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVAS 403
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKD 204
RG+DV+ V VINYD P++ E+Y+H A F T + R +D
Sbjct: 404 RGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 210 (79.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 45/136 (33%), Positives = 70/136 (51%)
Query: 81 LCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGS 140
L D G T A+IFCN + VD + +S+ K + + +HGD+DQ+ R + FR G
Sbjct: 244 LIDAEGE-KCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGK 302
Query: 141 SRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKR 200
R+L+ +D+ ARG+DV VS V N+D+P + E+Y+H AI D++
Sbjct: 303 LRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEK 362
Query: 201 TLKDTEQFYNTRIEEM 216
L E+ I +
Sbjct: 363 ALDAIEKLIQKDIPRL 378
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 212 (79.7 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 44/133 (33%), Positives = 70/133 (52%)
Query: 72 EREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDV 131
E+ED K L + + + +IF T+R+ D LT M + + +HGD +Q RD
Sbjct: 326 EKED-KLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDW 384
Query: 132 IMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAI 191
++ +F+ G + +LI TD+ +RG+DV+ V VIN+D P+N E+YIH A
Sbjct: 385 VLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAY 444
Query: 192 NFVTAEDKRTLKD 204
F T + + D
Sbjct: 445 TFFTPNNMKQAHD 457
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 212 (79.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 45/151 (29%), Positives = 83/151 (54%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFT 116
VG + + + Q I ++ E K D L ++ + + ++F T++K D++ + +++
Sbjct: 506 VGGACSDVEQMVIEVD-EFGKKDKLMEILQEIGSERTMVFVKTKKKADFIATFLCQEKVP 564
Query: 117 VSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH 176
+++HGD +Q R+ +R FR+G V++ T + ARG+D++ VS VIN+D+P + + Y+H
Sbjct: 565 STSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEYVH 624
Query: 177 XXXXXXXXXXXXVAINFVTAEDKRTLKDTEQ 207
AI+F DKR D EQ
Sbjct: 625 RIGRTGRCGNTGRAISFF---DKRG--DDEQ 650
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 211 (79.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 41/132 (31%), Positives = 77/132 (58%)
Query: 93 AVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLAR 152
A+IF T+ + E++ + + +A++GDM+Q R+ + + + G +LI TD+ AR
Sbjct: 248 AIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAAR 307
Query: 153 GIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTR 212
G+DV+++SLV+NYD+P + E+Y+H A+ FV ++R L++ E+
Sbjct: 308 GLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLT 367
Query: 213 IEEMPMNVADLI 224
I E+ + A+L+
Sbjct: 368 IPEVELPNAELL 379
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 209 (78.6 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 39/104 (37%), Positives = 59/104 (56%)
Query: 92 QAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLA 151
+ +IF T+R+ D LT M + + +HGD Q RD ++ +FRSG + +LI TD+ +
Sbjct: 339 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 398
Query: 152 RGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVT 195
RG+DV+ V VINYD P++ E+Y+H A F T
Sbjct: 399 RGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 442
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 212 (79.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 51/178 (28%), Positives = 88/178 (49%)
Query: 50 LRRRVLI----VGDSMTRIRQFYIYIEREDWKFDTLCDLYGTLSITQAVIFCNTRRKVDW 105
LRR ++ G R+ Q +Y+ ED K L ++ + +IF N ++ D
Sbjct: 530 LRRPAVVHIGSAGKPTERVEQV-VYMVPEDRKRKKLVEVLESQFQPPIIIFVNQKKGADM 588
Query: 106 LTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINY 165
L++ + K F + +HG Q+ R+ ++ + G+S +L+ TD+ RGIDV+ VSLV+NY
Sbjct: 589 LSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNY 648
Query: 166 DLPSNRENYIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQ-FYNTRIEEMPMNVAD 222
D+ + E+Y H AI F+T +D D +Q + + P +A+
Sbjct: 649 DMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVESPVSSCPPELAN 706
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 210 (79.0 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 38/102 (37%), Positives = 62/102 (60%)
Query: 94 VIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARG 153
++F +T+R D +T + + A+HGD +QN RD ++ +FR G + +++ TD+ ARG
Sbjct: 378 LVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARG 437
Query: 154 IDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVT 195
IDV+ ++ VINYD+P N E+Y+H AI+F T
Sbjct: 438 IDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFT 479
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 208 (78.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 45/144 (31%), Positives = 75/144 (52%)
Query: 77 KFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQF 136
K + L +L G + Q ++F +T+ + L + + + HGD Q AR+ ++ F
Sbjct: 228 KAELLSELVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDF 287
Query: 137 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTA 196
++G RVL+ TD+ ARG+D+Q + LVIN +LP E+Y+H AI+FV+
Sbjct: 288 KAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSP 347
Query: 197 EDKRTLKDTEQFYNTRIEEMPMNV 220
D L + E E++P+ V
Sbjct: 348 ADDEMLAEIEALIG---EKLPVTV 368
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 208 (78.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 45/144 (31%), Positives = 75/144 (52%)
Query: 77 KFDTLCDLYGTLSITQAVIFCNTRRKVDWLTESMLKKEFTVSAMHGDMDQNARDVIMRQF 136
K + L +L G + Q ++F +T+ + L + + + HGD Q AR+ ++ F
Sbjct: 228 KAELLSELVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDF 287
Query: 137 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHXXXXXXXXXXXXVAINFVTA 196
++G RVL+ TD+ ARG+D+Q + LVIN +LP E+Y+H AI+FV+
Sbjct: 288 KAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSP 347
Query: 197 EDKRTLKDTEQFYNTRIEEMPMNV 220
D L + E E++P+ V
Sbjct: 348 ADDEMLAEIEALIG---EKLPVTV 368
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 211 (79.3 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 51/164 (31%), Positives = 82/164 (50%)
Query: 57 VGDSMTRIRQFYIYIEREDWKFDTLCDLY---GTLSITQAVIFCNTRRKVDWLTESMLKK 113
VG + I Q +++E D K L DL GT S+T ++F T++ D L + + +
Sbjct: 408 VGSTSENITQKVVWVEEAD-KRSFLLDLLNATGTDSLT--LVFVETKKGADSLEDFLYHE 464
Query: 114 EFTVSAMHGDMDQNARDVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNREN 173
+ +++HGD Q R+ + QFRSG S +L+ T + ARG+D+ V VIN+DLP + E
Sbjct: 465 GYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPGDIEE 524
Query: 174 YIHXXXXXXXXXXXXVAINFVTAEDKRTLKDTEQFYNTRIEEMP 217
Y+H +A +F + KD +E+P
Sbjct: 525 YVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLLVEAKQEVP 568
WARNING: HSPs involving 528 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 224 212 0.00083 112 3 11 22 0.45 32
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 778
No. of states in DFA: 603 (64 KB)
Total size of DFA: 172 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.29u 0.11s 17.40t Elapsed: 00:00:01
Total cpu time: 17.32u 0.12s 17.44t Elapsed: 00:00:01
Start: Thu Aug 15 15:56:18 2013 End: Thu Aug 15 15:56:19 2013
WARNINGS ISSUED: 2