BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16210
(517 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NI60|ADCK3_HUMAN Chaperone activity of bc1 complex-like, mitochondrial OS=Homo
sapiens GN=ADCK3 PE=1 SV=1
Length = 647
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/344 (50%), Positives = 240/344 (69%)
Query: 168 SKLGYKKAMELTKKKDAFAVVDEDVARAPGAPKPIPKAKNKPQLNPVAKQRKVPSSRLGR 227
S +G+++ + + ED+ +A A ++K L+ A++RKVP +R+GR
Sbjct: 154 SAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARPENKQHKQTLSEHARERKVPVTRIGR 213
Query: 228 MVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGA 287
+ +FG LA GLG G +AEV +++L D S S F++ ANAERIV TLCKVRGA
Sbjct: 214 LANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKAVLGSSPFLSEANAERIVRTLCKVRGA 273
Query: 288 ALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDL 347
ALK+GQ+LSIQD I+P L K FERVRQSADFMP Q+ K L +LGP+W+ KL +
Sbjct: 274 ALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEE 333
Query: 348 KPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDN 407
+PFAAASIGQVH +K G EVAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++
Sbjct: 334 RPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEH 393
Query: 408 LVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPV 467
L++V ++EL E DY+REA C RKF++L++ +P+++VP ++DEL + +LTTEL+ G P+
Sbjct: 394 LIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPL 453
Query: 468 DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYN 511
DQ L E R IC ++ LCLRELF+F +MQTDPNWSNFFY+
Sbjct: 454 DQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYD 497
>sp|Q29RI0|ADCK3_BOVIN Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus
GN=ADCK3 PE=2 SV=1
Length = 648
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/329 (52%), Positives = 240/329 (72%), Gaps = 2/329 (0%)
Query: 190 EDVARAPGAPKPIPKAK-NKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
ED+ +A A K P++K +K L+ A++RKVP +R+GR+ +FG LA GLG G +AEV +
Sbjct: 176 EDIEKARQA-KARPESKPHKQALSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAK 234
Query: 249 RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQ 308
++L D S S F++ ANAERIV TLCKVRGAALK+GQ+LSIQD I+P L
Sbjct: 235 KSLRPDDPSGKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLA 294
Query: 309 KAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTE 368
K F+RVRQSADFMP Q+ K L +LGP+W+ KL + +PFAAASIGQVH LK G E
Sbjct: 295 KIFDRVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARLKGGRE 354
Query: 369 VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAEC 428
VAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA C
Sbjct: 355 VAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAAC 414
Query: 429 TRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMEL 488
R+F+EL++ +P+++VP ++DEL + +LTTEL+ G P+DQ L E R IC ++ L
Sbjct: 415 ARRFRELLKDHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVL 474
Query: 489 CLRELFQFRYMQTDPNWSNFFYNKDTKQL 517
CLRELF+F++MQTDPNWSNFFY+ + ++
Sbjct: 475 CLRELFEFQFMQTDPNWSNFFYDPELHKV 503
>sp|Q60936|ADCK3_MOUSE Chaperone activity of bc1 complex-like, mitochondrial OS=Mus
musculus GN=Adck3 PE=2 SV=2
Length = 645
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/323 (53%), Positives = 237/323 (73%), Gaps = 2/323 (0%)
Query: 190 EDVARAPGAPKPIPKAK-NKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
ED+ +A A K P++K +K L+ A++RKVP +R+GR+ +FG LA GLG+G +AEV +
Sbjct: 173 EDIEKARQA-KARPESKPHKQMLSERARERKVPVTRIGRLANFGGLAVGLGIGALAEVAK 231
Query: 249 RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQ 308
++L +S+ S F++ ANAERIV+TLCKVRGAALK+GQ+LSIQD I+P L
Sbjct: 232 KSLRSENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLA 291
Query: 309 KAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTE 368
K FERVRQSADFMP Q+ K L ++LGP W+ KL + +PFAAASIGQVH +K G E
Sbjct: 292 KIFERVRQSADFMPLKQMTKTLNSDLGPHWRDKLEYFEERPFAAASIGQVHLARMKGGRE 351
Query: 369 VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAEC 428
VAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA
Sbjct: 352 VAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAY 411
Query: 429 TRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMEL 488
+KF+EL++ +P+++VP ++DEL + +LTTELI G P+DQ L E R IC ++ L
Sbjct: 412 AKKFRELLKDHPFFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVL 471
Query: 489 CLRELFQFRYMQTDPNWSNFFYN 511
CLRELF+F MQTDPNWSNFFY+
Sbjct: 472 CLRELFEFHVMQTDPNWSNFFYD 494
>sp|Q5BJQ0|ADCK3_RAT Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus
norvegicus GN=Adck3 PE=2 SV=1
Length = 649
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/323 (53%), Positives = 235/323 (72%), Gaps = 2/323 (0%)
Query: 190 EDVARAPGAPKPIPKAK-NKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
ED+ +A A K P++K +K L+ A++RKVP +R+GR+ +FG LA GLG G +AEV +
Sbjct: 177 EDIEKARQA-KARPESKPHKQMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAK 235
Query: 249 RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQ 308
++L +S+ S F++ ANAERIV+TLCKVRGAALK+GQ+LSIQD I+P L
Sbjct: 236 KSLRSENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLA 295
Query: 309 KAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTE 368
K FERVRQSADFMP Q+ K L +LGP W+ KL + +PFAAASIGQVH LK G E
Sbjct: 296 KIFERVRQSADFMPLKQMTKTLNNDLGPHWRDKLEYFEERPFAAASIGQVHLARLKGGRE 355
Query: 369 VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAEC 428
VAMKIQYPGVA+ I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA
Sbjct: 356 VAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAY 415
Query: 429 TRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMEL 488
+KF+EL++ +P+++VP ++DEL + +LTTELI G P+DQ L E R IC ++ L
Sbjct: 416 AKKFRELLKDHPFFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVL 475
Query: 489 CLRELFQFRYMQTDPNWSNFFYN 511
CLRELF+F MQTDPNWSNFFY+
Sbjct: 476 CLRELFEFHVMQTDPNWSNFFYD 498
>sp|Q96D53|ADCK4_HUMAN Uncharacterized aarF domain-containing protein kinase 4 OS=Homo
sapiens GN=ADCK4 PE=1 SV=2
Length = 544
Score = 352 bits (903), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/330 (52%), Positives = 245/330 (74%), Gaps = 4/330 (1%)
Query: 189 DEDVARAPGAPKPIPKAKNKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTR 248
+ED+ RA A P+ +PQL+ +++RKVP+SR+ R+ +FG LA GLG+G +AE+ +
Sbjct: 56 EEDIRRAREAR---PRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAK 112
Query: 249 RTLGFGDSSLSVGTTLDSA-FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPEL 307
+++ G G+ LDS+ F++ ANAERIV TLC VRGAALK+GQ+LSIQD++ ISP+L
Sbjct: 113 KSMPGGRLQSEGGSGLDSSPFLSEANAERIVQTLCTVRGAALKVGQMLSIQDNSFISPQL 172
Query: 308 QKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGT 367
Q FERVRQSADFMP+WQ+ +VL ELG DW++K++SL+ PFAAASIGQVH GLL+DGT
Sbjct: 173 QHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGT 232
Query: 368 EVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAE 427
EVA+KIQYPG+A+ I+SD+ NL+ V+K+ P G+F + ++ ++EL WE DY+REA
Sbjct: 233 EVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAA 292
Query: 428 CTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVME 487
C + F++L+ P++ VP V+ EL T ++L EL GVP+DQC L + R IC ++
Sbjct: 293 CAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLT 352
Query: 488 LCLRELFQFRYMQTDPNWSNFFYNKDTKQL 517
LCLRELF+FR+MQTDPNW+NF Y+ + Q+
Sbjct: 353 LCLRELFEFRFMQTDPNWANFLYDASSHQV 382
>sp|Q5RGU1|ADCK3_DANRE Chaperone activity of bc1 complex-like, mitochondrial OS=Danio
rerio GN=adck3 PE=2 SV=1
Length = 602
Score = 351 bits (900), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 170/333 (51%), Positives = 232/333 (69%), Gaps = 19/333 (5%)
Query: 186 AVVDEDVARAPGAPKPIPKAKNKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAE 245
+ ED+ +A A + K +K L+ A++RKVP +RLGR+ +FG LA GLG+G +AE
Sbjct: 141 GITAEDIEKAREAKQNGSKP-HKQMLSERARERKVPVTRLGRLANFGGLAVGLGIGALAE 199
Query: 246 VTRRTLGFGDSSLSVGTTLDSA-FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVIS 304
V +++L D + + LDS+ F++ ANAERIV TLCKVRGAALK+GQ+LSIQD I+
Sbjct: 200 VAKKSLRSEDKNGNKKAVLDSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFIN 259
Query: 305 PELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK 364
P+L K FERVRQSADFMP Q+ K L +LGP+W+ KL + +PFAAASIGQ
Sbjct: 260 PQLAKIFERVRQSADFMPIKQMTKALSNDLGPNWRDKLEMFEERPFAAASIGQ------- 312
Query: 365 DGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKR 424
YPGVA+ I SD++NL+ V+ + N PEG+F ++L++V ++EL E DY R
Sbjct: 313 ----------YPGVAQSINSDVNNLMTVLSMSNALPEGLFPEHLIDVMRRELALECDYIR 362
Query: 425 EAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKL 484
EA+C RKFKEL++ +P+++VP VI ELS+ +LTTEL+ G P+DQ L E + ICK
Sbjct: 363 EAKCARKFKELLKDHPFFYVPDVISELSSQHVLTTELVPGFPLDQAEALTQELKNEICKN 422
Query: 485 VMELCLRELFQFRYMQTDPNWSNFFYNKDTKQL 517
++ LCLRELF+FRYMQTDPNWSNFFY+ T ++
Sbjct: 423 ILNLCLRELFEFRYMQTDPNWSNFFYDPQTHRV 455
>sp|Q566J8|ADCK4_MOUSE Uncharacterized aarF domain-containing protein kinase 4 OS=Mus
musculus GN=Adck4 PE=2 SV=1
Length = 533
Score = 350 bits (899), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 237/311 (76%), Gaps = 1/311 (0%)
Query: 208 KPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSA 267
+PQL+ +++RKVP+SR+ R+ SFG LA GLG+G +AEVT+++L G + L S+
Sbjct: 73 RPQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLPGGSLQHEGVSGLGSS 132
Query: 268 -FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQV 326
F++ ANAERIV TLC VRGAALKIGQ+LSIQD++ ISP+LQ+ FERVRQSADFMP+WQ+
Sbjct: 133 PFLSEANAERIVQTLCTVRGAALKIGQMLSIQDNSFISPQLQRIFERVRQSADFMPRWQM 192
Query: 327 EKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 386
+VL ELG DW+ K++SL+ PFAAASIGQVH GLLKDGTEVA+KIQYPGVA+ I+SD+
Sbjct: 193 MRVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGLLKDGTEVAVKIQYPGVAQSIQSDV 252
Query: 387 DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
+NL+ ++K+ PEG+F + ++ ++EL WE DY+REA C + F++L+ P++ VP
Sbjct: 253 ENLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFRKLLADDPFFRVPA 312
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWS 506
V+ EL T ++L EL G+P+DQC L + R IC ++ LCLRELF+FR+MQTDPNW+
Sbjct: 313 VVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWA 372
Query: 507 NFFYNKDTKQL 517
NF Y+ + Q+
Sbjct: 373 NFLYDASSHQV 383
>sp|Q6AY19|ADCK4_RAT Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus
norvegicus GN=Adck4 PE=2 SV=1
Length = 528
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 236/310 (76%), Gaps = 4/310 (1%)
Query: 208 KPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSA 267
+PQL+ +++RKVP+SR+ R+ SFG LA GLG+G +AEVT+++L G S+ S
Sbjct: 73 RPQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLPGG----SLQHEGSSP 128
Query: 268 FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVE 327
F+ ANAERIV TLC VRGAALKIGQ+LSIQD+++ISP+LQ+ FERVRQSADFMP+WQ+
Sbjct: 129 FLTEANAERIVQTLCTVRGAALKIGQMLSIQDNSLISPQLQRVFERVRQSADFMPRWQMM 188
Query: 328 KVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDID 387
KVL ELG DW+ K++SL+ PFAAASIGQVH G+LKDGTEVA+KIQYPGVA+ I+SD+
Sbjct: 189 KVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQ 248
Query: 388 NLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTV 447
NL+ ++K+ PEG+F + ++ ++EL WE DY+REA C + FK+L+ P++ VP V
Sbjct: 249 NLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAV 308
Query: 448 IDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSN 507
++EL T ++L EL G+P+DQC L + R IC ++ LCLRELF+FR+MQTDPNW+N
Sbjct: 309 VEELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWAN 368
Query: 508 FFYNKDTKQL 517
F Y+ + ++
Sbjct: 369 FLYDASSHKV 378
>sp|Q18486|COQ8_CAEEL Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans
GN=coq-8 PE=3 SV=2
Length = 755
Score = 342 bits (876), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 213/301 (70%), Gaps = 1/301 (0%)
Query: 215 AKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSAFINPANA 274
+ + VP++R+GR+ +FG LA GL G AEVTRRT G G G + F++ ANA
Sbjct: 301 SNESSVPATRIGRLATFGQLAFGLLGGATAEVTRRTFGIGKRLQEEGIP-KNPFLSEANA 359
Query: 275 ERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTEL 334
+RIV TLC+VRGAALK+GQ+LSIQDS+ + P L + FERVRQSADFMP QV + +
Sbjct: 360 DRIVATLCRVRGAALKLGQMLSIQDSSTVPPALLQIFERVRQSADFMPIKQVHRQMKDAF 419
Query: 335 GPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK 394
G DW+ K D KPFA ASIGQVH +LKDG VA+K+QYPGVA+GI+SDIDNL+ V+
Sbjct: 420 GDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLS 479
Query: 395 IWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTG 454
+ +FP+GMFLD V VA++EL E DY+REA +KF+EL+ + +VP VIDELS+
Sbjct: 480 VGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFRELIADWQDVYVPEVIDELSSS 539
Query: 455 QILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDT 514
++LTTEL+ G PVD CV+ R +I +ELCL+E+F +R+MQTDPNWSNFF K
Sbjct: 540 RVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFLWRFMQTDPNWSNFFLGKHP 599
Query: 515 K 515
K
Sbjct: 600 K 600
>sp|P27697|COQ8_YEAST Probable serine/threonine-protein kinase COQ8, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ8 PE=1 SV=1
Length = 501
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 192/312 (61%), Gaps = 6/312 (1%)
Query: 206 KNKPQLNPVAKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLD 265
K++ + K VP+SR+ R+ +GSLAAG+G+ A+ G + + T
Sbjct: 56 KHEEEKKDTLKSSSVPTSRISRLFHYGSLAAGVGMNAAAK------GISEVAKGNSPTWK 109
Query: 266 SAFINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQ 325
S ++ +N +RI N K+RG ALKIGQ+LS QD V+ EL + RV+ SA+ MPQ Q
Sbjct: 110 SLILSDSNIDRITNKFSKMRGVALKIGQLLSFQDEKVLPKELYEILSRVQNSANHMPQRQ 169
Query: 326 VEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESD 385
+EKV+ ELG +WK+K S D P AAASIGQVHA L G V +KIQYPGV + I+SD
Sbjct: 170 LEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQYPGVKESIDSD 229
Query: 386 IDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVP 445
+++L+ ++ ++ P+G+FLD + A+ EL WE DY REA +KF+ L++ P + VP
Sbjct: 230 LNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQKFEALLKDDPAFEVP 289
Query: 446 TVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNW 505
V E +T I+T +EG + + E++ I + +M LCL E+ F+YMQTDPNW
Sbjct: 290 HVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCLEEIATFKYMQTDPNW 349
Query: 506 SNFFYNKDTKQL 517
+NF YN TK++
Sbjct: 350 ANFLYNGRTKKI 361
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc1 PE=2 SV=1
Length = 610
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 184/302 (60%), Gaps = 13/302 (4%)
Query: 219 KVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFG--DSSLSVGTTLDSAFINPANAER 276
KVPSS+ R+ +G LA L VG I E +R G D +L +N N E
Sbjct: 178 KVPSSQWSRLWHYGGLATSLSVGAIGEKMKRMWGISKDDGAL---------LLNERNVEI 228
Query: 277 IVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGP 336
+VN L ++RGAALK+GQ+LS QDS +I P + + ERVR A MP+ Q+E+V+V LG
Sbjct: 229 LVNKLTQMRGAALKMGQMLSFQDSKLIDPRVSQILERVRDGAHSMPEKQLEQVMVKNLGK 288
Query: 337 DWKSKLSSLDLKPFAAASIGQVH-AGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKI 395
+W + S D KP AAASIGQVH A L + EV +K+QYPGV I+SD++NL ++K
Sbjct: 289 NWMTHYSEFDRKPMAAASIGQVHRARLASNHMEVVVKVQYPGVMSSIDSDLNNLAYLLKA 348
Query: 396 WNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQ 455
+ P+G+FL+N + A+KEL WE DY+REA +F L++ + VP V E S
Sbjct: 349 SRILPKGLFLENSLAAARKELKWECDYEREAAFAERFGSLLKNDSDFKVPMVFREASGPS 408
Query: 456 ILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDTK 515
++T E + G+ + + +R HI L+ + CLRE+ ++ +MQTDPNWSNF YN TK
Sbjct: 409 VITLEYLHGIALGK-QKYSQATRNHIGYLLTKQCLREISEYHFMQTDPNWSNFLYNGKTK 467
Query: 516 QL 517
++
Sbjct: 468 KI 469
>sp|Q54IH6|ABKA_DICDI Probable serine/threonine-protein kinase abkA OS=Dictyostelium
discoideum GN=abkA PE=3 SV=1
Length = 565
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 197/324 (60%), Gaps = 18/324 (5%)
Query: 209 PQLNPV-AKQRKVPSSRLGRMVSFGSLAAGLGVGTIAEVTRRTLGFGDSSLSVGTTLDSA 267
P+LN + +K K+PSS+ R F LA G+G G + E T+RT+ SS S ++ +
Sbjct: 96 PELNYIKSKGHKIPSSQTSRFWEFTKLAVGVGAGFLGEKTKRTIDSSSSSSSPSSSYSAI 155
Query: 268 FINPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVE 327
F + NAER+ + ++RGAALKIGQ+LSIQD + + P+ + +RVR++A+ +P Q+
Sbjct: 156 FTD-TNAERMAESFSRMRGAALKIGQVLSIQDESFLPPKFVEILDRVRKNANPIPLEQLY 214
Query: 328 KVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDID 387
+ ELG +W+SK P AAASIGQVH + DG EVA+K+QYPGVA I SDI
Sbjct: 215 NTMSNELGENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIK 274
Query: 388 NLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVE---------P 438
NL ++K+ + PE +++ +E A+ EL E DY EA KFK L+E
Sbjct: 275 NLSSLLKM--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSINSGTNGS 332
Query: 439 YPY---YFVPTVIDELSTGQILTTELIEGVPVDQCV--DLDYESRKHICKLVMELCLREL 493
+ Y +VP VI EL+T +ILTTE + G +D+ + + E+R I K ++ LCL EL
Sbjct: 333 FKYLKDLYVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNILSLCLAEL 392
Query: 494 FQFRYMQTDPNWSNFFYNKDTKQL 517
F+F +MQ DPNW+NF + + K++
Sbjct: 393 FEFNFMQVDPNWTNFVVDFENKRI 416
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ +A R+++ C RG +K+GQ L + ++ PE K + A P V +
Sbjct: 74 VHFRSAHRLLDLCCANRGTFIKVGQHLGALE-YLVPPEYTKTLSVLHSQAPCTPFPDVVQ 132
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI-- 386
V+ +LG + + KP AAS+ QVH +L+DG +VA+K+Q+P V DI
Sbjct: 133 VIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILL 192
Query: 387 -DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVP 445
+ L+ +K +FP+ F+ L+E AKK L E+D++ E K +V + + +P
Sbjct: 193 MEVLLHAVK--KIFPQFEFM-WLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFSFLRIP 249
Query: 446 TVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHI-----CKLVMELCLRELFQFRYMQ 500
+ ELST ++L E +EG V+ D +Y R I + + +L +F ++
Sbjct: 250 RIYWELSTKRVLVMEYMEGGQVN---DREYMKRNQIDINQVARALGQLYSEMIFVHGFVH 306
Query: 501 TDPNWSNFFYNKDTKQL 517
DP+ N ++ + L
Sbjct: 307 CDPHPGNVLVRQNPETL 323
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 10/216 (4%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ +A R+++ C RG +K+GQ L+ + ++ PE K + A P V +
Sbjct: 74 VHLRSAHRLLDLCCFNRGTFIKVGQHLAALEY-LVPPEYTKTLSVLHSQAPCTPFTDVVQ 132
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI-- 386
V+ +LG + + P AAS+ QVH +L+DG +VA+K+Q+P V DI
Sbjct: 133 VIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILI 192
Query: 387 -DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVP 445
+ L+ V+K +FP+ F+ L+E AKK L E+D++ E K +V + + +P
Sbjct: 193 MEVLLHVVK--KIFPQFEFM-WLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFSFLRIP 249
Query: 446 TVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHI 481
+ ELST ++L E +EG V+ D +Y R I
Sbjct: 250 RIYWELSTKRVLVMEYMEGGQVN---DREYMKRNQI 282
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 29/298 (9%)
Query: 231 FGSLAAGLGVGTIAEVTR------RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKV 284
FG + G + T A +T R + +G L S ++ +AER+ C
Sbjct: 31 FGVVRVGRAIATTAVITYDYLTSLRNVPYGSEEYDF---LKSQ-VHLRSAERLRELCCAN 86
Query: 285 RGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSS 344
RG +K+GQ L D ++ E + + + A + ++E+V+ +LG + K S
Sbjct: 87 RGTFIKVGQHLGALDY-LLPEEYTRTLKVLHSQAPQSTRQEIEQVIREDLGKEIKELFVS 145
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI---DNLIGVMKIWNVFPE 401
+ P AAS+ QVH +L+DG VA+KIQ+P V DI + L+ V+K +FP+
Sbjct: 146 FEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVK--QIFPD 203
Query: 402 GMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTEL 461
F+ LVE AKK L E+D+ E K ++++ + + VP + ELST ++L E
Sbjct: 204 FEFM-WLVEEAKKNLPLELDFLNEGRNAEKVAQMLKNFEFLKVPRIYWELSTRRVLLMEF 262
Query: 462 IEGVPVD-------QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNK 512
+EG V+ +D++ E +++ KL E+ +F ++ DP+ N K
Sbjct: 263 MEGGQVNDKAYMEKNGIDVN-EISRNLGKLYSEM----IFVNGFVHCDPHPGNVLVKK 315
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 28/301 (9%)
Query: 231 FGSLAAGLGVGTIAEVTR------RTLGFG-DSSLSVGTTLDSAF--INPANAERIVNTL 281
FG++ G V T A ++ +++ +G + L + + F ++ +A R+
Sbjct: 34 FGAVRVGRAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELC 93
Query: 282 CKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSK 341
C RG +K+GQ L D ++ E + + A ++ +V+ +LG +
Sbjct: 94 CANRGTFIKVGQHLGALDY-LLPEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDL 152
Query: 342 LSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNL-IGVMKIWNVFP 400
S D P AS+ QVH +L DG VA+K+Q+P V DI + + V+ + +FP
Sbjct: 153 FQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFP 212
Query: 401 EGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTE 460
E F+ LV+ AKK L E+D+ E K +++ + + VP + +LST ++L E
Sbjct: 213 EFEFM-WLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLME 271
Query: 461 LIEGVPVDQCVDLDYESR---------KHICKLVMELCLRELFQFRYMQTDPNWSNFFYN 511
++G V+ D DY R +H+ K+ E+ +F ++ DP+ N
Sbjct: 272 FVDGGQVN---DRDYMERNKIDVNEISRHLGKMYSEM----IFVNGFVHCDPHPGNVLVR 324
Query: 512 K 512
K
Sbjct: 325 K 325
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 25/296 (8%)
Query: 231 FGSLAAGLGVGTIAEVTR------RTLGFGDSSLSVGTTLDSAFINPANAERIVNTLCKV 284
FG++ G V T A ++ R++ +G S + ++ +A R+ C
Sbjct: 34 FGAVRVGRAVATTAVISYDYLTSLRSVPYG----SEEYLQRRSQVHLRSARRLFELCCAN 89
Query: 285 RGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSS 344
RG +K+GQ L D ++ E + + A +V +V+ +LG + S
Sbjct: 90 RGTFIKVGQHLGALDY-LLPEEYTSTLKVLHSQAPQSSMQEVRQVIREDLGKEIHDLFLS 148
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNL-IGVMKIWNVFPEGM 403
D P AAS+ QVH +L DG VA+K+Q+P V DI + + V+ + +FP+
Sbjct: 149 FDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPDFE 208
Query: 404 FLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIE 463
F+ LV+ AKK L E+D+ E K ++ + + VP + ELST ++L E +E
Sbjct: 209 FM-WLVDEAKKNLPLELDFLNEGRNAEKVAHMLRHFDFLKVPQIHWELSTKRVLLMEFVE 267
Query: 464 GVPVD-------QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNK 512
G V+ +D++ E H+ K+ E+ +F ++ DP+ N K
Sbjct: 268 GGQVNDRAYMEKNQIDVN-EISCHLGKMYSEM----IFVNGFVHCDPHPGNVLVRK 318
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 9/247 (3%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPE-LQKAFERVRQSADFMPQWQVEKVLVT 332
A+R+ T+ K G +K+GQI+++Q +N+ PE KAF+ + +A + +++ +
Sbjct: 110 AQRLFKTIYKNGGLYIKMGQIIAMQSNNL--PEAYGKAFQGMFDNAPQVEWEELQDIFKE 167
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 392
+ G + +S++ + A+ASI QVH +L G +VA+KIQ P VAK + D+ +
Sbjct: 168 QYGRPVEEVFASIEKRAAASASIAQVHRAVLPSGEKVAVKIQKPDVAKQMSWDLLVYKYM 227
Query: 393 MKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY----FVPTVI 448
M +++ + + L V+ + L EVD+ EA + +E VE Y ++P V
Sbjct: 228 MYVYDKWIFHIPLYFTVDYVSERLRSEVDFTTEANNSEHAREGVEETDYLRDKIYIPKVY 287
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 506
E+S +++ TE +G+P+ L S+K I + ++F + + DP+
Sbjct: 288 KEISGKRVMVTEWADGIPLYDQTALSEAGMSKKEILTNLFRFLAFQMFHSKQVHCDPHPG 347
Query: 507 NFFYNKD 513
N K+
Sbjct: 348 NILVRKN 354
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 281 LCKVRGA-ALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWK 339
LC G +K GQ ++ ++++ + K ++ A + ++VE V + +LG
Sbjct: 254 LCLTNGGLYIKAGQYIA-SLNHILPIQYTKTLSVLQDQAPWRDFYEVESVFLKDLGNAPN 312
Query: 340 SKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNV- 398
S D P AAAS+ QVH + K+G EVA+K+QY + + + DI ++ + N+
Sbjct: 313 HYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMA 372
Query: 399 FPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILT 458
FP+ F + + E K L E+D+ +EA+ + + + ++P V S+ +ILT
Sbjct: 373 FPDFEF-NWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNNNAYIPKVFRPYSSKRILT 431
Query: 459 TELIEGVPVD--QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSN 507
TE I G ++ Q + S K + + ME+ ++F ++ DP+ N
Sbjct: 432 TEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGN 482
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTE 333
A+ +V+ + +G +K+ QI++ D +++ E K+ + A F+ +VEK+ E
Sbjct: 245 AKAMVDLCYQNKGIFIKVAQIIASLD-HILPQEYIKSLSIFQDHAPFVTFEEVEKLFKIE 303
Query: 334 LGPDWKSKLSSLDLKPFAAASIGQVHAGLLK----DGTEVAMKIQYPGVAKGIESDIDNL 389
G + P +AS+ QVH LK + EVA+K+QYPG+ + D+D+L
Sbjct: 304 TGKHPDDMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQKDMDSL 363
Query: 390 IGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 449
V+ +F ++ A L E+D+ EA+ + K K+L +P V
Sbjct: 364 DNVLTYITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQLFIGNQQLSIPKVYW 423
Query: 450 ELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSN 507
+T +ILT E I GV +D LD K + L ++ +++F ++ +DP+ N
Sbjct: 424 NHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLHSDPHPGN 483
Query: 508 FFYNK 512
K
Sbjct: 484 LLVRK 488
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K+GQ LS + ++ P+ + ++ + P + + EL ++ SS+ +
Sbjct: 162 VKLGQGLSTR-PDLCPPDYLEELAELQDALPTFPDAEAFACIERELDLSLETIFSSVSPE 220
Query: 349 PFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLD- 406
P AAAS+GQV+ L+ G VA+K+Q PG+ + I D + GV K+ N + + + D
Sbjct: 221 PIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRGVGKLINKYVDFITTDV 280
Query: 407 -NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGV 465
L++ + E++Y +EA+ R+FK+L VP + + ++ ++LT E +EG
Sbjct: 281 LTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRKVLTMEWVEGT 340
Query: 466 PVDQCVDLDYESRKHICKLV---MELCLRELFQFRYMQTDPNWSNFFYNKDTK 515
+++ + ++ + K + LV ++ LR+L ++ + DP+ N D K
Sbjct: 341 KLNEQLAIESQGLK-VLDLVNTGIQCSLRQLLEYGFFHADPHPGNLLATPDGK 392
>sp|B3PH50|UBIB_CELJU Probable ubiquinone biosynthesis protein UbiB OS=Cellvibrio
japonicus (strain Ueda107) GN=ubiB PE=3 SV=1
Length = 552
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K GQ+LS + +++ ++ ++ + + + ++++ + LG +S +++
Sbjct: 64 VKFGQLLSTR-PDLVPADIVLELNHLQDNVTPFSKGEFQRIVESSLGASVAEVFASFNIE 122
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIW--NVFPEGMFLD 406
P A+AS+ QVH +LKDG EV +K+ PG+ K I DI L+ V + W N +G L
Sbjct: 123 PLASASVAQVHTAVLKDGREVVIKVIRPGIDKVIAQDIALLLRVAR-WVENNTLDGKRLH 181
Query: 407 --NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEG 464
+VE + + E+D +REA + + P +VP V E + +L E I G
Sbjct: 182 PVEIVEDYRTTIFDELDLQREAANGSQLRRNFLNSPLLYVPEVYWEYTRTNVLVMERIYG 241
Query: 465 VPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
+PV L+ + K + + +E+ ++F+ + D + N F
Sbjct: 242 IPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFFHADMHPGNIF 288
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ A A ++ L + +K+GQ LS + +++ P ++ P +
Sbjct: 99 VSRAKAIQLRELLTNLGPTYIKVGQALSTR-PDLVPPVFLDELTTLQDQLPSFPNEVAYR 157
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDN 388
+ ELG + + L +P AAAS+GQV+ G LK G VA+K+Q P + + I DI
Sbjct: 158 FIEEELGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDI-Y 216
Query: 389 LIGVMKIWNVFPEGMFLDNLVEVAKK---ELGWEVDYKREAECTRKFKELVEPYPYYFVP 445
++ + +W +LV + + + E++Y +EA KF +L P +VP
Sbjct: 217 IMRSLSLWARRSVKRLRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVP 276
Query: 446 TVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDP 503
++ + + ++LT E +EG+ + + + H+ ++ ++ LR+L + + DP
Sbjct: 277 SIYWQYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHADP 336
Query: 504 NWSNFFYNKDTK 515
+ N D +
Sbjct: 337 HPGNLLAMADGR 348
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+KIGQILS + + P + K +++ + +E + EL + D
Sbjct: 48 IKIGQILSTRPDLLPLPYI-KELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKT 106
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNL 408
P +ASI QVH +LKDG V +KIQ PG+A+ +++D+ + K+ N+ + F D L
Sbjct: 107 PIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLS---IIKKLLNI-TKTKFTDAL 162
Query: 409 VE--VAKKEL----GWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
++ A EL E+D+ E +KFK+L E + P ID+L T +I+ E I
Sbjct: 163 IDPKEAIDELFISTTQELDFINEINNIKKFKKLNEDVKFVRTPYTIDKLCTEKIIVMEKI 222
Query: 463 EGVPVDQCVDL---DYESRKHICKLVMELCLRELFQFRYMQTDPNWSN 507
G+ +D L Y+ + KL + +++FQ + DP+ N
Sbjct: 223 VGIKIDNLKKLLNEGYDLEELGKKLTLS-YFKQVFQDGFFHGDPHPGN 269
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K GQ+LS + +++ P++ R++ P+ Q ++ +LG + D +
Sbjct: 71 IKFGQLLSTR-RDLLPPDIADELARLQDQVPPFPEDQAIALIERQLGAPVSQLFARFDSQ 129
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDNL 408
P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + +I
Sbjct: 130 PLASASVAQVHAAQLKSGEEVVVKVVRPGLKPVIRQDLAWLFLLARIAERASADARRLRP 189
Query: 409 VEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEGV 465
VEV +K + E+D REA + + E P +VP V +L Q+L E I GV
Sbjct: 190 VEVVSDYEKTIFDELDLLREAANASQLRRNFEGSPLLYVPQVYWDLCRHQVLVMERIYGV 249
Query: 466 PV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDT 514
PV DQ D+ K + + +E+ ++F+ + D + N F + T
Sbjct: 250 PVTDLATLADQRTDM-----KLLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTRT 300
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 6/240 (2%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTE 333
A+ I L + +K+GQ+ S + S++ E + +++ Q ++ E
Sbjct: 85 AKWIRENLLSLGPTFIKVGQLFSTR-SDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEE 143
Query: 334 LGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVM 393
LG S D P AAAS+GQVH L G +V +K+Q PG+ K D+ L +
Sbjct: 144 LGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIA 203
Query: 394 KIWNVFPE---GMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDE 450
+ + P+ G + + E K L E DY RE F+ + VP V
Sbjct: 204 QYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWVKVPRVYWR 263
Query: 451 LSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNF 508
++ QILT E + G+ + L+ RK + +L L +L + DP+ N
Sbjct: 264 YTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNL 323
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 20/249 (8%)
Query: 273 NAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVT 332
A+ +V L + +KIGQ LS + +++I E +AF +++ Q V+
Sbjct: 57 RAQWLVQQLLYLGPTFIKIGQSLSTR-ADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQ 115
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 392
EL ++ P A+AS+GQVH +L G V +K+Q PG+ + D + L
Sbjct: 116 ELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQT 175
Query: 393 MKIWNVFPEGMF-------LDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVP 445
+++ + G ++ + + L E+DY E + +F++ YP VP
Sbjct: 176 LRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVP 235
Query: 446 TVIDELSTGQILTTELIEGVPVDQ-------CVDLDYESRKHICKLVMELCLRELFQFRY 498
+ + +T +LT E + G+ VD ++LD + IC + +L + F
Sbjct: 236 EIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFF---- 291
Query: 499 MQTDPNWSN 507
Q+DP+ N
Sbjct: 292 -QSDPHPGN 299
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K GQ+LS + ++I ++ +++ P +V LG + +S D
Sbjct: 65 VKFGQVLSTR-RDLIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLGRPIEEVFASFDAD 123
Query: 349 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIW--NVFPEGMFLD 406
P A+ASI QVH G+L DG EVA+K+ P V IE+D+ L+ V W + P+G L
Sbjct: 124 PVASASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADL-ALLRVAAAWLERLSPDGRRLR 182
Query: 407 NLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEG 464
VA+ + L E+D REA + + + +P +I +LS+ ++L E + G
Sbjct: 183 PREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIWDLSSAEVLVMERMHG 242
Query: 465 VPVDQC 470
VP+ Q
Sbjct: 243 VPISQI 248
>sp|Q5E8V3|UBIB_VIBF1 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1
Length = 544
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVR-QSADFMPQWQVEKVLVT 332
ER+ L ++ +K GQ++S + ++ P L ++ Q A F Q ++ +
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTR-RDLFPPHLADQLALLQDQVAPFDGQLAKDQ-MEM 111
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIG 391
ELG + + D+KP A+ASI QVH LKD G E+ +K+ P + IESDI +
Sbjct: 112 ELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYR 171
Query: 392 VMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 448
+ + + PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 172 MARLVEQHIPEARRLKPVKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVI 231
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 506
+LS+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 232 LDLSSEHLMVSERIYGIQVSDIEQLERNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPG 291
Query: 507 NFFYNKDT 514
N F N D
Sbjct: 292 NVFVNPDN 299
>sp|B5FF80|UBIB_VIBFM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain MJ11) GN=ubiB PE=3 SV=1
Length = 544
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVR-QSADFMPQWQVEKVLVT 332
ER+ L ++ +K GQ++S + ++ P L ++ Q A F Q ++ +
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTR-RDLFPPHLADQLALLQDQVAPFDGQLAKDQ-MEM 111
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIG 391
ELG + + D+KP A+ASI QVH LKD G E+ +K+ P + IESDI +
Sbjct: 112 ELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYR 171
Query: 392 VMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 448
+ + + PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 172 MARLVEQHIPEARRLKPVEVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVI 231
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 506
+LS+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 232 LDLSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPG 291
Query: 507 NFFYNKDT 514
N F N D
Sbjct: 292 NVFVNPDN 299
>sp|Q2SN14|UBIB_HAHCH Probable ubiquinone biosynthesis protein UbiB OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiB PE=3 SV=1
Length = 546
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 20/251 (7%)
Query: 273 NAERIVNTLCKVRGAALKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKV 329
ER+ L ++ +K GQILS + + ++ EL++ ++V A M +E+
Sbjct: 51 RGERLRRALEELGPIFVKFGQILSTRKDLLPEDLADELKRLQDKVPPFASDMAVRIIEES 110
Query: 330 L---VTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 386
L V+EL D+++ P A+ASI QVHA LK+G EV +K+ PG+ K I DI
Sbjct: 111 LKSPVSELFADFQTY-------PMASASIAQVHAATLKNGKEVVVKVIRPGIEKTIRLDI 163
Query: 387 DNLIGVMK-IWNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYY 442
++ V + + N + +G L + VEV K + E+D +REA T + K
Sbjct: 164 ALMLLVARLVENYWEDGKRL-HPVEVVKDYEHTIIDELDLQREAANTSQLKRNFAGSELI 222
Query: 443 FVPTVIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQ 500
++P V E++ ++L E I GVP+ L + K + + +E+ ++F+ +
Sbjct: 223 YIPEVYWEMTHSRVLVMERIYGVPIADVEQLRKANVNMKLLAERGVEIFFTQVFRDSFFH 282
Query: 501 TDPNWSNFFYN 511
D + N F +
Sbjct: 283 ADMHPGNIFVD 293
>sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0889 PE=3 SV=1
Length = 408
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 25/260 (9%)
Query: 275 ERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTEL 334
E + L ++ +K+GQ+LS + +++ P A ++ + +P +E +L E
Sbjct: 44 EVLTKILVELGPFYIKLGQLLSTR-PDLLPPRYINALTALQSNVPPLPWSAIEDLLQREF 102
Query: 335 GPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES------DIDN 388
++ +P AA SIGQ+H +L+ G VA+K++ PG+ +E D+
Sbjct: 103 PQPLGETFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAE 162
Query: 389 LIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY-----F 443
L+ + + + D + K EL ++ EA T + + ++
Sbjct: 163 LLALTEFGQNYDIVKLADEFTQTVKAEL----NFDTEAAYTNNLRTNLAKTTWFDPNQLV 218
Query: 444 VPTVIDELSTGQILTTELIEGVPVDQCVDLDY--------ESRKHICKLVMELCLRELFQ 495
+P V EL+ + L E ++GVP+ DL E +K I L+ ++L+
Sbjct: 219 IPKVYWELTNQKFLVLEWLDGVPI-LTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYV 277
Query: 496 FRYMQTDPNWSNFFYNKDTK 515
+ DP+ N FY D +
Sbjct: 278 DGFFHADPHPGNIFYLADGR 297
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLV-TELGPDWKSKLSS 344
+K GQILS + V I EL +RV + Q ++++ T LG +S +
Sbjct: 67 VKFGQILSTRRDLVPQDIGDELVMLQDRVEPF-----EGQTARIIIETALGKSVESAFAH 121
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK-IWNVFPEGM 403
D P A+ASI QVHA L DG EV +K+ P + I DI L + + + P
Sbjct: 122 FDTVPLASASISQVHAATLHDGREVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNAD 181
Query: 404 FLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTEL 461
+ VA+ E L E+D +RE + E +VP VI + Q+LT E
Sbjct: 182 KIRPCEIVAEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAEQVLTLER 241
Query: 462 IEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD 513
+ G+P D LD RK + + + ++F+ + D + N + + D
Sbjct: 242 MYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSD 295
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 19/258 (7%)
Query: 269 INPANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEK 328
++ +A+++ K G +K+GQ + + V ++ E + QV +
Sbjct: 84 VHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVCE 143
Query: 329 VLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDN 388
V E+G + D P A+AS+ QVH DG +VA+K+Q+ + +D
Sbjct: 144 VFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHDGKKVAVKVQHAHMTDTAAADTAA 203
Query: 389 LIGVM-----KIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPY--PY 441
+GV+ +I+ F LD + E KEL + V+ K +C F++L P+ Y
Sbjct: 204 -VGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKL-SPHIAEY 261
Query: 442 YFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRK------HICKLVMELCLRELFQ 495
+ PT+ LST ++LT E ++G V+ D+D + RK + KLV + +F+
Sbjct: 262 VYAPTIYWNLSTSKLLTMEFMDGAQVN---DVD-KIRKLGIQPYEVSKLVSQTFAEMMFK 317
Query: 496 FRYMQTDPNWSNFFYNKD 513
++ DP+ +N D
Sbjct: 318 HGFVHCDPHAANLIVRPD 335
>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810,
chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1
SV=1
Length = 692
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 333 ELGPDWKSKLSSLDLKPFAAASIGQVH-AGLLKDGTEVAMKIQYPGVAKGIESD---IDN 388
ELG S + +P AAAS+GQV+ A L + G VA+K+Q PGV I D +
Sbjct: 178 ELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRY 237
Query: 389 LIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 448
+ G++K F L+ +V+ L E+DY EA+ KF++L VP +
Sbjct: 238 IAGLIKKAGRFNSD--LEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMY 295
Query: 449 DELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNF 508
E ST ++L E +EG +++ DL ++ ++ + +L ++ + DP+ NF
Sbjct: 296 TEYSTSKVLVMEWVEGQKLNEVNDL------YLVEVGVYCSFNQLLEYGFYHADPHPGNF 349
Query: 509 FYNKD 513
D
Sbjct: 350 LRTYD 354
>sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing protein kinase At5g05200,
chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=1
SV=1
Length = 540
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSLDLK 348
+K+GQ ++ + PE K F+ A +P ++ K+L ELG +S +D
Sbjct: 141 IKLGQFIA-SAPTLFPPEYVKEFQNCFDKAPPVPFEEIRKILQEELGRPIESVYEYVDPT 199
Query: 349 PFAAASIGQVHAGLLKDGTE-VAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFLDN 407
P A+ASI QVH L+ E V +K+ PG+ + +D++ + V +I+ +
Sbjct: 200 PIASASIAQVHGARLRGSQEDVVIKVLKPGIEDFLVADLNFIYVVSRIFEFLSPEFSRTS 259
Query: 408 LVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYY---FVPTVIDELSTGQILTTEL 461
LV + K + + EVD+ +EA+ FK +E P V S+ ++LT E
Sbjct: 260 LVGIVKDIRESMLEEVDFNKEAQNIESFKRYLETMGLTGQATAPRVYKYCSSRRVLTMER 319
Query: 462 IEGVPVDQCVDLD 474
+ GVP+ DLD
Sbjct: 320 LYGVPL---TDLD 329
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 29/248 (11%)
Query: 289 LKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQ---VEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + +++ PE ++ D +P + +V+ LG +
Sbjct: 64 VKFGQVLSTR-RDLLPPEYADELALLQ---DRVPPFDGDIARQVVERSLGRKVEELFVDF 119
Query: 346 DLKPFAAASIGQVHAGLLKD-----GTEVAMKIQYPGVAKGIESDIDNLIGVMKIW--NV 398
DLKP A+AS+ QVH L+ G EVA+K+ PG+ IE D+ +L+ + W +
Sbjct: 120 DLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDL-SLMRTLAGWVEKL 178
Query: 399 FPEGMFLDNLVEVAK--KELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQI 456
F +G L VA+ K L E+D EA + + + VP V + S+ ++
Sbjct: 179 FADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYDYSSREV 238
Query: 457 LTTELIEGVPVDQC-------VDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
LT E + G+PV Q VDL + + + +E+ ++F+ + D + N F
Sbjct: 239 LTLEWMHGIPVGQIERLREAGVDL-----QKLSRFGVEIFFTQVFRHGFFHADMHPGNIF 293
Query: 510 YNKDTKQL 517
D + +
Sbjct: 294 VAADGRYI 301
>sp|P96936|Y647_MYCTU Uncharacterized protein Rv0647c/MT0675 OS=Mycobacterium
tuberculosis GN=Rv0647c PE=3 SV=1
Length = 488
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 325 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 384
+V K+ V ELG + +S + +PFA+ASI QVH L+ G EV +KIQ PG+ + + +
Sbjct: 143 EVHKLFVEELGDEPARLFASFEEEPFASASIAQVHYATLRSGEEVVVKIQRPGIRRRVAA 202
Query: 385 DIDNLIGVMKIWNVFPEGM----------FLDNLVEVAKKELGWEVDYKREAECTRKFKE 434
D+ L + + G F DNL E E+D++ EA+ +
Sbjct: 203 DLQILKRFAQTVELAKLGRRLSAQDVVADFADNLAE--------ELDFRLEAQSMEAWVS 254
Query: 435 LVEPYPY---YFVPTVIDELSTGQILTTELIEGVPVDQC 470
+ P VP V + +T ++LT E + G+ +D
Sbjct: 255 HLHASPLGKNIRVPQVHWDFTTERVLTMERVHGIRIDNA 293
>sp|C1DHS4|UBIB_AZOVD Probable ubiquinone biosynthesis protein UbiB OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1
Length = 537
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + + I+ EL +RV F PQ Q ++ +LG +
Sbjct: 72 IKFGQILSTRRDLLPEDIADELTWLQDRV---PPFNPQ-QSVALIEEQLGARVDEAFARF 127
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKI---WNVFPEG 402
D +P A+AS+ QVHA LK G EV +K+ PG+ I D+ L ++ +
Sbjct: 128 DSEPLASASVAQVHAAQLKTGEEVVVKVVRPGLKAVIRQDLAWLYLFARLAERASTEARR 187
Query: 403 MFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ L ++V +K + E+D REA + K E P +VP + + ++L E I
Sbjct: 188 LHLVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQIYWDWCRPKVLVMERI 247
Query: 463 EGVP-------VDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
GVP VDQ DL K + + +E+ ++F+ + D + N F
Sbjct: 248 YGVPVTDLAALVDQGTDL-----KLLAERGVEIFFTQVFRDSFFHADMHPGNIF 296
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 117/249 (46%), Gaps = 14/249 (5%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
+ +R+ L ++ +K GQILS + +++ ++ ++ ++++ P Q ++
Sbjct: 50 SRGDRLRLALEELGPVFVKFGQILSTR-RDLLPDDMAESLKQLQDRVPPFPSEQARGIIE 108
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIG 391
LG + P A+AS+ QVHA L +G +V +K+ PG+ K I D+ L+
Sbjct: 109 KSLGAPVSELFAEFSPDPMASASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDL-GLMY 167
Query: 392 VM-----KIWNVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFV 444
+M K W+ EG L + VA + + E+D +REA + + E P ++
Sbjct: 168 LMAGLLEKYWS---EGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSPLIYI 224
Query: 445 PTVIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTD 502
P + + + +L E I G+P+ L+ + + + + +E+ ++F+ + D
Sbjct: 225 PFIDWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHAD 284
Query: 503 PNWSNFFYN 511
+ N F +
Sbjct: 285 MHPGNIFVD 293
>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390,
chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1
SV=1
Length = 682
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 271 PANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVL 330
P A ++ N LC + + +K GQ+L+ ++I + ++ P ++
Sbjct: 164 PFRARQLRNLLCNLGPSFIKAGQVLA-NRPDIIREDYMNELCILQDDVPPFPNEVAFNII 222
Query: 331 VTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNL 389
ELG ++ S + + AAAS+GQV+ L+ G +VA+K+Q P + I D+
Sbjct: 223 EEELGQPLENIFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLF 282
Query: 390 IGVMKIWNVFP---EGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
+ N F G + +V+ ++L E+DY EA F E + P +P
Sbjct: 283 RTLASFLNGFSLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPG 342
Query: 447 VIDELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYM 499
V L ++L E I+G+ D +DL+ + + LR+L +F
Sbjct: 343 VYKNLCGPRVLVMEWIDGIRCTDPQAIKDAGIDLN-----GFLTVGVSAALRQLLEFGLF 397
Query: 500 QTDPNWSNFFYNKDTK 515
DP+ N F +D +
Sbjct: 398 HGDPHPGNIFAMQDGR 413
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLV-TELGPDWKSKLSS 344
+K GQILS + V I EL +RV + Q ++++ T LG +S +
Sbjct: 67 VKFGQILSTRRDLVPQDIGDELVMLQDRVEPF-----EGQTARIIIETALGKSVESAFAH 121
Query: 345 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK-IWNVFPEGM 403
D P A+ASI QVHA L D EV +K+ P + I DI L + + + P
Sbjct: 122 FDTVPLASASISQVHAATLHDRREVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNAD 181
Query: 404 FLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTEL 461
+ VA+ E L E+D +RE + E +VP VI + ++LT E
Sbjct: 182 KIRPREIVAEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAERVLTLER 241
Query: 462 IEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKD 513
+ G+P D LD RK + + + ++F+ + D + N + + D
Sbjct: 242 MYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSD 295
>sp|C3LPS7|UBIB_VIBCM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1
Length = 544
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
A +R+ L ++ +K GQ++S + ++ P + ++ Q ++++
Sbjct: 52 ALGDRLRLALQELGPVWIKFGQMMSTR-RDLFPPHIADPLAMLQDKVAPFDGLQAKQLIE 110
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLI 390
ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I++DI +
Sbjct: 111 EELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMY 170
Query: 391 GVMKI-WNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTV 447
V +I PE L +V +K L E+D +REA + + E +VP V
Sbjct: 171 RVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEV 230
Query: 448 IDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNW 505
+ + ++ +E I G+ V L + K + + + + ++F+ + D +
Sbjct: 231 LTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHP 290
Query: 506 SNFFYNKD 513
N F N +
Sbjct: 291 GNVFVNPN 298
>sp|Q9KVQ4|UBIB_VIBCH Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=ubiB PE=3 SV=1
Length = 544
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
A +R+ L ++ +K GQ++S + ++ P + ++ Q ++++
Sbjct: 52 ALGDRLRLALQELGPVWIKFGQMMSTR-RDLFPPHIADPLAMLQDKVAPFDGLQAKQLIE 110
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLI 390
ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I++DI +
Sbjct: 111 EELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMY 170
Query: 391 GVMKI-WNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTV 447
V +I PE L +V +K L E+D +REA + + E +VP V
Sbjct: 171 RVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEV 230
Query: 448 IDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNW 505
+ + ++ +E I G+ V L + K + + + + ++F+ + D +
Sbjct: 231 LTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHP 290
Query: 506 SNFFYNKD 513
N F N +
Sbjct: 291 GNVFVNPN 298
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + + I+ EL +RV F Q Q K++ +LG S
Sbjct: 71 IKFGQILSTRRDLLPEDIADELMLLQDRV---PPFDSQ-QSMKLIEEQLGKKISEVFSRF 126
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D+ P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + + F L
Sbjct: 127 DVDPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIGQDLAWLFILARAAERFSADARL 186
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ V+V +K + E+D REA + K E P +VP V + ++L E I
Sbjct: 187 LHPVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERI 246
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
GV V DQ D+ K + + +E+ ++F+ + D + N F
Sbjct: 247 YGVQVTDLATLADQRTDM-----KMLAERGVEIFFTQVFRDSFFHADMHPGNIF 295
>sp|B6EHA6|UBIB_ALISL Probable ubiquinone biosynthesis protein UbiB OS=Aliivibrio
salmonicida (strain LFI1238) GN=ubiB PE=3 SV=1
Length = 543
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 274 AERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVR-QSADFMPQWQVEKVLVT 332
ER+ L ++ +K GQ++S + ++ P L ++ Q A F Q +++ ++
Sbjct: 54 GERLRLALQELGPVWIKFGQMMSTR-RDLFPPHLADQLALLQDQVAPFDGQLAKDQMELS 112
Query: 333 ELGP--DWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNL 389
GP +W + D+ P A+ASI QVH LK+ G E+ +K+ P + IE+DI +
Sbjct: 113 LGGPLENW---FTDFDIVPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIEADIRLM 169
Query: 390 IGVMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPT 446
+ + PE L ++E +K L E+D +REA + + E +VP
Sbjct: 170 YRMATLVEKHIPEARRLKPVEVIEEYEKTLIDELDLRREASNAMQLRRNFEGSEELYVPE 229
Query: 447 VIDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPN 504
VI ++S+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 230 VILDVSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMH 289
Query: 505 WSNFFYNKDTKQ 516
N F N D +
Sbjct: 290 PGNVFVNPDNPE 301
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQILS + + I+ EL + +RV F Q V K++ +LG S
Sbjct: 71 IKFGQILSTRRDLLPEDIADELMRLQDRV---PPFDSQLSV-KLIEEQLGKKISEVFSRF 126
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + + L
Sbjct: 127 DVEPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIAQDLAWLFILARAAEKVSADARL 186
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ V+V +K + E+D REA + K E P +VP V + ++L E I
Sbjct: 187 LHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERI 246
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
G+ V DQ D+ K + + +E+ ++F+ + D + N F
Sbjct: 247 YGIQVTDLATLADQRTDM-----KMLAERGVEIFFTQVFRDSFFHADMHPGNIF 295
>sp|A5F4G3|UBIB_VIBC3 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=ubiB PE=3 SV=1
Length = 544
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 272 ANAERIVNTLCKVRGAALKIGQILSIQDSNVISPELQKAFERVRQSADFMPQWQVEKVLV 331
A +R+ L ++ +K GQ++S + ++ P + ++ Q ++++
Sbjct: 52 ALGDRLRLALQELGPVWIKFGQMMSTR-RDLFPPYIADPLAMLQDKVAPFDGLQAKQLIE 110
Query: 332 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLI 390
ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I++DI +
Sbjct: 111 EELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMY 170
Query: 391 GVMKI-WNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTV 447
V +I PE L +V +K L E+D +REA + + E +VP V
Sbjct: 171 RVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEV 230
Query: 448 IDELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNW 505
+ + ++ +E I G+ V L + K + + + + ++F+ + D +
Sbjct: 231 LTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHP 290
Query: 506 SNFFYNKD 513
N F N +
Sbjct: 291 GNVFVNPN 298
>sp|B1J2S6|UBIB_PSEPW Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain W619) GN=ubiB PE=3 SV=1
Length = 539
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + + I+ EL +RV F P+ Q ++ ++LG S
Sbjct: 71 IKFGQLLSTRRDLLPTDIADELMLLQDRV---PPFDPK-QAVALIESQLGAKVGEVFSRF 126
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + K
Sbjct: 127 DVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDLAWLFLIAKGAERASADARR 186
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ VE+ +K + E+D REA + + E +VP V +L ++L E I
Sbjct: 187 LHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERI 246
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
GVPV DQ D+ K + + +E+ ++F+ + D + N F
Sbjct: 247 YGVPVTDMATLADQRTDM-----KLLAERGVEVFFTQVFRHSFFHADMHPGNIF 295
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 289 LKIGQILSIQDSNV---ISPELQKAFERVRQSADFMPQWQVEKVLVTELGPDWKSKLSSL 345
+K GQ+LS + + I+ EL +RV F PQ V ++ +LG S
Sbjct: 72 IKFGQLLSTRRDLLPTDIADELMLLQDRV---PPFDPQHAV-ALIEEQLGAKVGEVFSRF 127
Query: 346 DLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEGMFL 405
D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L + K
Sbjct: 128 DVEPLASASVAQVHAARLKSGEEVVVKVVRPGLKPVIAQDLAWLFLIAKAAERASADARR 187
Query: 406 DNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELI 462
+ VE+ +K + E+D REA + + E +VP V +L ++L E I
Sbjct: 188 LHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERI 247
Query: 463 EGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFF 509
GVPV DQ D+ K + + +E+ ++F+ + D + N F
Sbjct: 248 YGVPVTDMATLADQRTDM-----KMLAERGVEVFFTQVFRDSFFHADMHPGNIF 296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,524,198
Number of Sequences: 539616
Number of extensions: 7631510
Number of successful extensions: 21241
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 20932
Number of HSP's gapped (non-prelim): 279
length of query: 517
length of database: 191,569,459
effective HSP length: 122
effective length of query: 395
effective length of database: 125,736,307
effective search space: 49665841265
effective search space used: 49665841265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)