BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16211
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96D53|ADCK4_HUMAN Uncharacterized aarF domain-containing protein kinase 4 OS=Homo
sapiens GN=ADCK4 PE=1 SV=2
Length = 544
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 244/335 (72%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP+WQ+ +VL ELG DW++K++SL+ PFAAASIGQVH GLL+DGTEVA+KIQYPG+A+
Sbjct: 186 MPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQ 245
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I+SD+ NL+ V+K+ P G+F + ++ ++EL WE DY+REA C + F++L+ P
Sbjct: 246 SIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLLANDP 305
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
++ VP V+ EL T ++L EL GVP+DQC L + R IC ++ LCLRELF+FR+MQ
Sbjct: 306 FFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFEFRFMQ 365
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNW+NF Y+ + Q+ LLDFGA+R + EF D YI+V+KA ADGD+D VL SR + F
Sbjct: 366 TDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDLKF 425
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTG+E+K +AHV VMIL E F+ + G +DFG +T +RI +L+P +L HRLCPPPEE
Sbjct: 426 LTGFETKAFSDAHVEAVMILGEPFATQ-GPYDFGSGETARRIQDLIPVLLRHRLCPPPEE 484
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
Y+LHRKL+G FL C+ L+ +AC + +D Y Y
Sbjct: 485 TYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRY 519
>sp|Q566J8|ADCK4_MOUSE Uncharacterized aarF domain-containing protein kinase 4 OS=Mus
musculus GN=Adck4 PE=2 SV=1
Length = 533
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 244/335 (72%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP+WQ+ +VL ELG DW+ K++SL+ PFAAASIGQVH GLLKDGTEVA+KIQYPGVA+
Sbjct: 187 MPRWQMMRVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGLLKDGTEVAVKIQYPGVAQ 246
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I+SD++NL+ ++K+ PEG+F + ++ ++EL WE DY+REA C + F++L+ P
Sbjct: 247 SIQSDVENLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFRKLLADDP 306
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
++ VP V+ EL T ++L EL G+P+DQC L + R IC ++ LCLRELF+FR+MQ
Sbjct: 307 FFRVPAVVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQ 366
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNW+NF Y+ + Q+ LLDFGA+RA+ EF D YI+V+KA ADGD+D+VL S+ + F
Sbjct: 367 TDPNWANFLYDASSHQVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKF 426
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTG+E+K +AHV VMIL E F+ G +DFG +T +RI L+P +L HRL PPPEE
Sbjct: 427 LTGFETKAFSDAHVEAVMILGEPFAAS-GPYDFGAGETARRIQGLIPVLLRHRLRPPPEE 485
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
Y+LHRKL+G FL C++L +AC + +D Y Y
Sbjct: 486 TYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 520
>sp|Q6AY19|ADCK4_RAT Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus
norvegicus GN=Adck4 PE=2 SV=1
Length = 528
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 244/335 (72%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP+WQ+ KVL ELG DW+ K++SL+ PFAAASIGQVH G+LKDGTEVA+KIQYPGVA+
Sbjct: 182 MPRWQMMKVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAE 241
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I+SD+ NL+ ++K+ PEG+F + ++ ++EL WE DY+REA C + FK+L+ P
Sbjct: 242 SIQSDVQNLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFKKLLADDP 301
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
++ VP V++EL T ++L EL G+P+DQC L + R IC ++ LCLRELF+FR+MQ
Sbjct: 302 FFRVPAVVEELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQ 361
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNW+NF Y+ + ++ LLDFGA+RA+ EF D YI+V+KA ADGD+D+VL S+ + F
Sbjct: 362 TDPNWANFLYDASSHKVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKF 421
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTG+E+K +AHV VMIL E F+ G +DFG +T +RI L+P +L HRL PPPEE
Sbjct: 422 LTGFETKAFSDAHVEAVMILGEPFAAS-GSYDFGAGETARRIQGLIPVLLRHRLRPPPEE 480
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
Y+LHRKL+G FL C++L +AC + +D Y Y
Sbjct: 481 TYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 515
>sp|Q8NI60|ADCK3_HUMAN Chaperone activity of bc1 complex-like, mitochondrial OS=Homo
sapiens GN=ADCK3 PE=1 SV=1
Length = 647
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 242/335 (72%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP Q+ K L +LGP+W+ KL + +PFAAASIGQVH +K G EVAMKIQYPGVA+
Sbjct: 307 MPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQ 366
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA C RKF++L++ +P
Sbjct: 367 SINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLKGHP 426
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+++VP ++DEL + +LTTEL+ G P+DQ L E R IC ++ LCLRELF+F +MQ
Sbjct: 427 FFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQ 486
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNWSNFFY+ ++ LLDFGATR Y + F D YIQ+I+A AD D++ V S +M F
Sbjct: 487 TDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKF 546
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTGYE K+ME+AH++ ++IL E F+ FDFG Q TT++I L+P +L HRL PPPEE
Sbjct: 547 LTGYEVKVMEDAHLDAILILGEAFASD-EPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEE 605
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
YSLHRK+ G FL+CSKLK + C M ++ Y NY
Sbjct: 606 TYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q29RI0|ADCK3_BOVIN Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus
GN=ADCK3 PE=2 SV=1
Length = 648
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 245/335 (73%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP Q+ K L +LGP+W+ KL + +PFAAASIGQVH LK G EVAMKIQYPGVA+
Sbjct: 307 MPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARLKGGREVAMKIQYPGVAQ 366
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA C R+F+EL++ +P
Sbjct: 367 SINSDVNNLMTVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARRFRELLKDHP 426
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+++VP ++DEL + +LTTEL+ G P+DQ L E R IC ++ LCLRELF+F++MQ
Sbjct: 427 FFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFQFMQ 486
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNWSNFFY+ + ++ LLDFGATR + + F D YIQ+I+A A+ D++ VL S +M F
Sbjct: 487 TDPNWSNFFYDPELHKVALLDFGATREFDRSFTDLYIQIIRAAANQDREAVLKKSIEMKF 546
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTGYE K ME+AH++ ++IL E F+ + FDFG Q TT++I L+P +L HRL PPPEE
Sbjct: 547 LTGYEVKAMEDAHLDAILILGEAFASE-EPFDFGTQSTTEKIHNLIPIMLKHRLVPPPEE 605
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
YSLHRK+ G FL+CSKLK + C M ++ Y NY
Sbjct: 606 TYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>sp|Q60936|ADCK3_MOUSE Chaperone activity of bc1 complex-like, mitochondrial OS=Mus
musculus GN=Adck3 PE=2 SV=2
Length = 645
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 241/335 (71%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP Q+ K L ++LGP W+ KL + +PFAAASIGQVH +K G EVAMKIQYPGVA+
Sbjct: 304 MPLKQMTKTLNSDLGPHWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQ 363
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA +KF+EL++ +P
Sbjct: 364 SINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHP 423
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+++VP ++DEL + +LTTELI G P+DQ L E R IC ++ LCLRELF+F MQ
Sbjct: 424 FFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQ 483
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNWSNFFY+ ++ LLDFGATR Y + F D YIQVI+A AD D++ VL S +M F
Sbjct: 484 TDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKF 543
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTGYE K ME+AH++ ++IL E F+ + FDFG Q TT++I L+P +L HRL PPPEE
Sbjct: 544 LTGYEVKAMEDAHLDAILILGEAFASE-EPFDFGTQSTTEKIHNLIPVMLKHRLIPPPEE 602
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
YSLHRK+ G FL+CSKLK + C M ++ Y NY
Sbjct: 603 TYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 637
>sp|Q5BJQ0|ADCK3_RAT Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus
norvegicus GN=Adck3 PE=2 SV=1
Length = 649
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 239/335 (71%), Gaps = 1/335 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP Q+ K L +LGP W+ KL + +PFAAASIGQVH LK G EVAMKIQYPGVA+
Sbjct: 308 MPLKQMTKTLNNDLGPHWRDKLEYFEERPFAAASIGQVHLARLKGGREVAMKIQYPGVAQ 367
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I SD++NL+ V+ + N+ PEG+F ++L++V ++EL E DY+REA +KF+EL++ +P
Sbjct: 368 SINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHP 427
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+++VP ++DEL + +LTTELI G P+DQ L E R IC ++ LCLRELF+F MQ
Sbjct: 428 FFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQ 487
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNWSNFFY+ ++ LLDFGATR Y + F D YIQVI+A AD D++ VL S +M F
Sbjct: 488 TDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKF 547
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTGYE K ME+AH++ ++IL E F+ + FDFG Q TT++I L+P +L HRL PPPEE
Sbjct: 548 LTGYEVKAMEDAHLDAILILGEAFASE-EPFDFGTQSTTEKIHNLIPIMLKHRLIPPPEE 606
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
YSLHRK+ G FL+CSKLK C M ++ Y NY
Sbjct: 607 TYSLHRKMGGSFLICSKLKACFPCKAMFEEAYSNY 641
>sp|Q18486|COQ8_CAEEL Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans
GN=coq-8 PE=3 SV=2
Length = 755
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 243/341 (71%), Gaps = 5/341 (1%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP QV + + G DW+ K D KPFA ASIGQVH +LKDG VA+K+QYPGVA+
Sbjct: 406 MPIKQVHRQMKDAFGDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAE 465
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
GI+SDIDNL+ V+ + +FP+GMFLD V VA++EL E DY+REA +KF+EL+ +
Sbjct: 466 GIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFRELIADWQ 525
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+VP VIDELS+ ++LTTEL+ G PVD CV+ R +I +ELCL+E+F +R+MQ
Sbjct: 526 DVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFLWRFMQ 585
Query: 181 TDPNWSNFFYNKDTK----QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISR 236
TDPNWSNFF K K +L+LLDFGA+RAY K+F+D Y+ +IK+ DGDK K++ SR
Sbjct: 586 TDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYDGDKKKIIEYSR 645
Query: 237 KMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCP 296
++GFLTGYE+ +ME+AHV +VMI+ E + ++F QD T RI +L+P +L HRL
Sbjct: 646 EIGFLTGYETSVMEDAHVESVMIMGETLASN-HPYNFANQDVTMRIQKLIPVMLEHRLTS 704
Query: 297 PPEEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNYKF 337
PPEEIYSLHRKLSG +LL +KLK ++C + ++++NY F
Sbjct: 705 PPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEIHENYVF 745
>sp|Q5RGU1|ADCK3_DANRE Chaperone activity of bc1 complex-like, mitochondrial OS=Danio
rerio GN=adck3 PE=2 SV=1
Length = 602
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/335 (52%), Positives = 231/335 (68%), Gaps = 18/335 (5%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MP Q+ K L +LGP+W+ KL + +PFAAASIGQ YPGVA+
Sbjct: 276 MPIKQMTKALSNDLGPNWRDKLEMFEERPFAAASIGQ-----------------YPGVAQ 318
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I SD++NL+ V+ + N PEG+F ++L++V ++EL E DY REA+C RKFKEL++ +P
Sbjct: 319 SINSDVNNLMTVLSMSNALPEGLFPEHLIDVMRRELALECDYIREAKCARKFKELLKDHP 378
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+++VP VI ELS+ +LTTEL+ G P+DQ L E + ICK ++ LCLRELF+FRYMQ
Sbjct: 379 FFYVPDVISELSSQHVLTTELVPGFPLDQAEALTQELKNEICKNILNLCLRELFEFRYMQ 438
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNWSNFFY+ T ++ LLDFGATR + + F D YI++IKA ADG+++ VL S M F
Sbjct: 439 TDPNWSNFFYDPQTHRVALLDFGATRGFDESFTDVYIEIIKAAADGNREGVLKQSIDMKF 498
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFGGQDTTKRITELVPTILNHRLCPPPEE 300
LTGYESK M AHV+ VMIL E F+ + FDFG Q TT+RI L+P +L RL PPPEE
Sbjct: 499 LTGYESKAMVNAHVDAVMILGEAFASE-EPFDFGAQSTTERIHNLIPVMLKQRLIPPPEE 557
Query: 301 IYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
YSLHRK+ G FL+CS+L K++C M + Y NY
Sbjct: 558 TYSLHRKMGGSFLICSRLNAKISCKDMFEAAYSNY 592
>sp|P27697|COQ8_YEAST Probable serine/threonine-protein kinase COQ8, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ8 PE=1 SV=1
Length = 501
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 218/333 (65%), Gaps = 1/333 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
MPQ Q+EKV+ ELG +WK+K S D P AAASIGQVHA L G V +KIQYPGV +
Sbjct: 165 MPQRQLEKVMAKELGANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQYPGVKE 224
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
I+SD+++L+ ++ ++ P+G+FLD + A+ EL WE DY REA +KF+ L++ P
Sbjct: 225 SIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQKFEALLKDDP 284
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
+ VP V E +T I+T +EG + + E++ I + +M LCL E+ F+YMQ
Sbjct: 285 AFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCLEEIATFKYMQ 344
Query: 181 TDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGF 240
TDPNW+NF YN TK++ LLDFGA+R ++++F+ +Y +++ D+ +S ++G+
Sbjct: 345 TDPNWANFLYNGRTKKIELLDFGASRPFAEDFILKYRKLLTYATLRDRKGAYEMSVQLGY 404
Query: 241 LTGYESKIMEEAHVNTVMILSEVFSEKIGE-FDFGGQDTTKRITELVPTILNHRLCPPPE 299
LTG ES+ M++AHV++V+ L E F + + FDF Q + RI + +LN RLCPPPE
Sbjct: 405 LTGLESQSMKDAHVDSVLTLGEPFRGDVDKSFDFKDQTVSDRIRGNIGLMLNERLCPPPE 464
Query: 300 EIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVY 332
E YSLHRK SG+FLLC+++ + C + K+++
Sbjct: 465 ETYSLHRKFSGIFLLCARMGASVHCAKLFKEIF 497
>sp|Q92338|ABCI_SCHPO Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc1 PE=2 SV=1
Length = 610
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 217/337 (64%), Gaps = 3/337 (0%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVH-AGLLKDGTEVAMKIQYPGVA 59
MP+ Q+E+V+V LG +W + S D KP AAASIGQVH A L + EV +K+QYPGV
Sbjct: 273 MPEKQLEQVMVKNLGKNWMTHYSEFDRKPMAAASIGQVHRARLASNHMEVVVKVQYPGVM 332
Query: 60 KGIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPY 119
I+SD++NL ++K + P+G+FL+N + A+KEL WE DY+REA +F L++
Sbjct: 333 SSIDSDLNNLAYLLKASRILPKGLFLENSLAAARKELKWECDYEREAAFAERFGSLLKND 392
Query: 120 PYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYM 179
+ VP V E S ++T E + G+ + + +R HI L+ + CLRE+ ++ +M
Sbjct: 393 SDFKVPMVFREASGPSVITLEYLHGIALGK-QKYSQATRNHIGYLLTKQCLREISEYHFM 451
Query: 180 QTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 239
QTDPNWSNF YN TK++ LLDFGA+ Y ++F+ +Y +++ A A +++K +S ++G
Sbjct: 452 QTDPNWSNFLYNGKTKKIELLDFGASIEYDEKFIKKYCRLLLAAAHRNREKCKKLSVELG 511
Query: 240 FLTGYESKIMEEAHVNTVMILSEVFS-EKIGEFDFGGQDTTKRITELVPTILNHRLCPPP 298
+L +ES M +AH+N++ L+E F+ + +DFG Q T R+ + +P +L+ RL PPP
Sbjct: 512 YLNNHESAQMIDAHINSIFTLAEPFAFDAPDVYDFGDQTITARVKQQIPVMLDLRLQPPP 571
Query: 299 EEIYSLHRKLSGVFLLCSKLKVKMACYPMLKDVYDNY 335
EE YSLHR+LSG FLLC+KL K+ C + + +Y
Sbjct: 572 EETYSLHRRLSGHFLLCAKLGAKVRCKELFSGMLKHY 608
>sp|Q54IH6|ABKA_DICDI Probable serine/threonine-protein kinase abkA OS=Dictyostelium
discoideum GN=abkA PE=3 SV=1
Length = 565
Score = 287 bits (734), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 221/360 (61%), Gaps = 26/360 (7%)
Query: 1 MPQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAK 60
+P Q+ + ELG +W+SK P AAASIGQVH + DG EVA+K+QYPGVA
Sbjct: 208 IPLEQLYNTMSNELGENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVAD 267
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEP-- 118
I SDI NL ++K+ + PE +++ +E A+ EL E DY EA KFK L+E
Sbjct: 268 SITSDIKNLSSLLKM--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSI 325
Query: 119 -------YPYY---FVPTVIDELSTGQILTTELIEGVPVDQCV--DLDYESRKHICKLVM 166
+ Y +VP VI EL+T +ILTTE + G +D+ + + E+R I K ++
Sbjct: 326 NSGTNGSFKYLKDLYVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNIL 385
Query: 167 ELCLRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADG 226
LCL ELF+F +MQ DPNW+NF + + K++ LLDFGA R Y EF+ Y++ I+ G +
Sbjct: 386 SLCLAELFEFNFMQVDPNWTNFVVDFENKRINLLDFGACRNYKSEFLFNYLKSIEGGVNR 445
Query: 227 DKDKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSE------KIGEFDFGGQDTTK 280
D +++L S K+G+LTG E+K M +A +++ILSE FS+ + + F + K
Sbjct: 446 DINQILEYSLKLGYLTGDENKQMNDAQAKSILILSEPFSKLYYKENNLKTYPFNEKQIAK 505
Query: 281 RITELVPTILNHRLCPPPEEIYSLHRKLSGVFLLCSKLKVKMAC---YPMLKDV-YDNYK 336
RI++L+PT+L +RL PPPEE YSLHRKLSG +L+CSKLK + + K++ Y NYK
Sbjct: 506 RISQLIPTMLKNRLKPPPEETYSLHRKLSGCYLVCSKLKSNINSTLIFNHFKNIFYKNYK 565
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 9/244 (3%)
Query: 4 WQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIE 63
++VE V + +LG S D P AAAS+ QVH + K+G EVA+K+QY + + +
Sbjct: 297 YEVESVFLKDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFD 356
Query: 64 SDIDNLIGVMKIWNV-FPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY 122
DI ++ + N+ FP+ F + + E K L E+D+ +EA+ + + +
Sbjct: 357 GDIFTHNVLLTLVNMAFPDFEF-NWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNNNA 415
Query: 123 FVPTVIDELSTGQILTTELIEGVPVD--QCVDLDYESRKHICKLVMELCLRELFQFRYMQ 180
++P V S+ +ILTTE I G ++ Q + S K + + ME+ ++F ++
Sbjct: 416 YIPKVFRPYSSKRILTTEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVH 475
Query: 181 TDPNWSNFFYNK-----DTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTIS 235
DP+ N + + Q++LLD G R Y +EF + + K + KV S
Sbjct: 476 VDPHAGNVLVRQHPNHPNQPQIVLLDHGLYREYDEEFRLNFCNLYKNLVLCNNKKVEKYS 535
Query: 236 RKMG 239
+ +G
Sbjct: 536 KALG 539
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 125/250 (50%), Gaps = 18/250 (7%)
Query: 2 PQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKG 61
P V +V+ +LG + + P AAS+ QVH +L+DG +VA+K+Q+P V
Sbjct: 126 PFTDVVQVIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQ 185
Query: 62 IESDI---DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEP 118
DI + L+ V+K +FP+ F+ L+E AKK L E+D++ E K +V
Sbjct: 186 SSRDILIMEVLLHVVK--KIFPQFEFM-WLIEEAKKNLPLELDFQNEGRNAEKMSSIVSS 242
Query: 119 YPYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHI-----CKLVMELCLREL 173
+ + +P + ELST ++L E +EG V+ D +Y R I + +L +
Sbjct: 243 FSFLRIPRIYWELSTKRVLVMEYMEGGQVN---DREYMKRNQIDVNKVSHALGKLYSEMI 299
Query: 174 FQFRYMQTDPNWSNFFYNKDTK----QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKD 229
F ++ DP+ N ++ + ++ILLD G + ++ F Y + +A DK+
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAADKE 359
Query: 230 KVLTISRKMG 239
++ S+++G
Sbjct: 360 RIRIYSQRLG 369
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 130/249 (52%), Gaps = 22/249 (8%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
++E+V+ +LG + K S + P AAS+ QVH +L+DG VA+KIQ+P V
Sbjct: 126 EIEQVIREDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSK 185
Query: 65 DI---DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPY 121
DI + L+ V+K +FP+ F+ LVE AKK L E+D+ E K ++++ + +
Sbjct: 186 DIFLMEVLLLVVK--QIFPDFEFM-WLVEEAKKNLPLELDFLNEGRNAEKVAQMLKNFEF 242
Query: 122 YFVPTVIDELSTGQILTTELIEGVPVD-------QCVDLDYESRKHICKLVMELCLRELF 174
VP + ELST ++L E +EG V+ +D++ SR ++ KL E+ +F
Sbjct: 243 LKVPRIYWELSTRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISR-NLGKLYSEM----IF 297
Query: 175 QFRYMQTDPNWSNFFYNK--DTKQ--LILLDFGATRAYSKEFMDQYIQVIKAGADGDKDK 230
++ DP+ N K D+ + +ILLD G + S+ F Y ++ A D +
Sbjct: 298 VNGFVHCDPHPGNVLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKADMKR 357
Query: 231 VLTISRKMG 239
V SR++G
Sbjct: 358 VQKYSRRLG 366
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 6 VEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESD 65
V +V+ +LG + + KP AAS+ QVH +L+DG +VA+K+Q+P V D
Sbjct: 130 VVQVIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARD 189
Query: 66 I---DNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY 122
I + L+ +K +FP+ F+ L+E AKK L E+D++ E K +V + +
Sbjct: 190 ILLMEVLLHAVK--KIFPQFEFM-WLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFSFL 246
Query: 123 FVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRKHI-----CKLVMELCLRELFQFR 177
+P + ELST ++L E +EG V+ D +Y R I + + +L +F
Sbjct: 247 RIPRIYWELSTKRVLVMEYMEGGQVN---DREYMKRNQIDINQVARALGQLYSEMIFVHG 303
Query: 178 YMQTDPNWSNFFYNKDTKQL----ILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLT 233
++ DP+ N ++ + L ILLD G + ++ F Y + +A D ++
Sbjct: 304 FVHCDPHPGNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAADMQQIRI 363
Query: 234 ISRKMG 239
S+++G
Sbjct: 364 YSQRLG 369
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 22/249 (8%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
++ +V+ +LG + S D P AS+ QVH +L DG VA+K+Q+P V
Sbjct: 136 EIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSK 195
Query: 65 DIDNL-IGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYF 123
DI + + V+ + +FPE F+ LV+ AKK L E+D+ E K +++ + +
Sbjct: 196 DILLMEVLVLAVKQLFPEFEFM-WLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLK 254
Query: 124 VPTVIDELSTGQILTTELIEGVPVDQCVDLDYESR---------KHICKLVMELCLRELF 174
VP + +LST ++L E ++G V+ D DY R +H+ K+ E+ +F
Sbjct: 255 VPRIHWDLSTERVLLMEFVDGGQVN---DRDYMERNKIDVNEISRHLGKMYSEM----IF 307
Query: 175 QFRYMQTDPNWSNFFYNKD----TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDK 230
++ DP+ N K +++LLD G + ++EF Y + ++ D +
Sbjct: 308 VNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFRLNYCHLWQSLIWTDMKR 367
Query: 231 VLTISRKMG 239
V S+++G
Sbjct: 368 VKEYSQRLG 376
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 18/247 (7%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
+V +V+ +LG + S D P AAS+ QVH +L DG VA+K+Q+P V
Sbjct: 129 EVRQVIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSK 188
Query: 65 DIDNL-IGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYF 123
DI + + V+ + +FP+ F+ LV+ AKK L E+D+ E K ++ + +
Sbjct: 189 DILLMEVLVLAVKQLFPDFEFM-WLVDEAKKNLPLELDFLNEGRNAEKVAHMLRHFDFLK 247
Query: 124 VPTVIDELSTGQILTTELIEGVPVD-------QCVDLDYESRKHICKLVMELCLRELFQF 176
VP + ELST ++L E +EG V+ +D++ E H+ K+ E+ +F
Sbjct: 248 VPQIHWELSTKRVLLMEFVEGGQVNDRAYMEKNQIDVN-EISCHLGKMYSEM----IFVN 302
Query: 177 RYMQTDPNWSNFFYNK--DT--KQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVL 232
++ DP+ N K DT +++LLD G + ++EF Y + ++ D D +
Sbjct: 303 GFVHCDPHPGNVLVRKRPDTGKAEIVLLDHGLYQVLTEEFRLDYCHLWQSLIWTDMDGLK 362
Query: 233 TISRKMG 239
S+++G
Sbjct: 363 QYSQRLG 369
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 16/251 (6%)
Query: 6 VEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESD 65
+E + EL + D P +ASI QVH +LKDG V +KIQ PG+A+ +++D
Sbjct: 84 IENLFFEELSSTIDNTFLYFDKTPIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTD 143
Query: 66 IDNLIGVMKIWNVFPEGMFLDNLVEV--AKKEL----GWEVDYKREAECTRKFKELVEPY 119
+ + K+ N+ + F D L++ A EL E+D+ E +KFK+L E
Sbjct: 144 LS---IIKKLLNI-TKTKFTDALIDPKEAIDELFISTTQELDFINEINNIKKFKKLNEDV 199
Query: 120 PYYFVPTVIDELSTGQILTTELIEGVPVDQCVDL---DYESRKHICKLVMELCLRELFQF 176
+ P ID+L T +I+ E I G+ +D L Y+ + KL + +++FQ
Sbjct: 200 KFVRTPYTIDKLCTEKIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLS-YFKQVFQD 258
Query: 177 RYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISR 236
+ DP+ N ++ + +DFG SK I A A D +K++++
Sbjct: 259 GFFHGDPHPGNLLIREN--HICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIM 316
Query: 237 KMGFLTGYESK 247
+G GY ++
Sbjct: 317 SIGVKKGYVNR 327
>sp|Q5E8V3|UBIB_VIBF1 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1
Length = 544
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 11/271 (4%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIG 71
ELG + + D+KP A+ASI QVH LKD G E+ +K+ P + IESDI +
Sbjct: 112 ELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYR 171
Query: 72 VMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 128
+ + + PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 172 MARLVEQHIPEARRLKPVKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVI 231
Query: 129 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 186
+LS+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 232 LDLSSEHLMVSERIYGIQVSDIEQLERNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPG 291
Query: 187 NFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTG 243
N F N D Q I LD G +KE + + + D KV + G++
Sbjct: 292 NVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSGWVPA 351
Query: 244 YESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
+ +EE M+ +F++ +GE FG
Sbjct: 352 DTN--VEEFEFAIRMVCEPIFAKPLGEISFG 380
>sp|B5FF80|UBIB_VIBFM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio fischeri
(strain MJ11) GN=ubiB PE=3 SV=1
Length = 544
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 11/271 (4%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIG 71
ELG + + D+KP A+ASI QVH LKD G E+ +K+ P + IESDI +
Sbjct: 112 ELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYR 171
Query: 72 VMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 128
+ + + PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 172 MARLVEQHIPEARRLKPVEVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVI 231
Query: 129 DELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWS 186
+LS+ ++ +E I G+ V L+ + K + + + + ++F+ + D +
Sbjct: 232 LDLSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPG 291
Query: 187 NFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTG 243
N F N D Q I LD G +KE + + + D KV + G++
Sbjct: 292 NVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSGWVPA 351
Query: 244 YESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
+ +EE M+ +F++ +GE FG
Sbjct: 352 DTN--VEEFEFAIRMVCEPIFAKPLGEISFG 380
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 6/196 (3%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIESDIDNLIG 71
EL ++ SS+ +P AAAS+GQV+ L+ G VA+K+Q PG+ + I D + G
Sbjct: 205 ELDLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIRG 264
Query: 72 VMKIWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
V K+ N + + + D L++ + E++Y +EA+ R+FK+L VP +
Sbjct: 265 VGKLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFW 324
Query: 130 ELSTGQILTTELIEGVPVDQCVDLDYESRK--HICKLVMELCLRELFQFRYMQTDPNWSN 187
+ ++ ++LT E +EG +++ + ++ + K + ++ LR+L ++ + DP+ N
Sbjct: 325 DYTSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGN 384
Query: 188 FFYNKDTKQLILLDFG 203
D K L LDFG
Sbjct: 385 LLATPDGK-LAFLDFG 399
>sp|B3PH50|UBIB_CELJU Probable ubiquinone biosynthesis protein UbiB OS=Cellvibrio
japonicus (strain Ueda107) GN=ubiB PE=3 SV=1
Length = 552
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 14/280 (5%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
+ ++++ + LG +S +++P A+AS+ QVH +LKDG EV +K+ PG+ K I
Sbjct: 99 EFQRIVESSLGASVAEVFASFNIEPLASASVAQVHTAVLKDGREVVIKVIRPGIDKVIAQ 158
Query: 65 DIDNLIGVMK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPY 121
DI L+ V + + N +G L +VE + + E+D +REA + + P
Sbjct: 159 DIALLLRVARWVENNTLDGKRLHPVEIVEDYRTTIFDELDLQREAANGSQLRRNFLNSPL 218
Query: 122 YFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESR--KHICKLVMELCLRELFQFRYM 179
+VP V E + +L E I G+PV L+ + K + + +E+ ++F+ +
Sbjct: 219 LYVPEVYWEYTRTNVLVMERIYGIPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFF 278
Query: 180 QTDPNWSNFFY---NKDTKQLILLDFGATRAYSKEFMDQY--IQVIKAGADGDKDKVLTI 234
D + N F + Q I +D + ++ DQY + + A D +V +
Sbjct: 279 HADMHPGNIFVAHEHPSAPQYIAVDMAIVGSLTR--ADQYYLARNLLAMFRRDYRQVAEL 336
Query: 235 SRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
+ G++ + EA V TV +F + + E F
Sbjct: 337 HVESGWVPSHVRVEELEAAVRTVC--EPIFEKPLKEISFA 374
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 5/242 (2%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
Q ++ ELG S D P AAAS+GQVH L G +V +K+Q PG+ K
Sbjct: 135 QAAGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTI 194
Query: 65 DIDNLIGVMKIWNVFPE---GMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPY 121
D+ L + + + P+ G + + E K L E DY RE F+ +
Sbjct: 195 DLAILKKIAQYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDW 254
Query: 122 YFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYM 179
VP V ++ QILT E + G+ + L+ RK + +L L +L +
Sbjct: 255 VKVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFF 314
Query: 180 QTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 239
DP+ N + + +LI DFG + + ++ + + A+ + ++++ +G
Sbjct: 315 HADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALG 374
Query: 240 FL 241
L
Sbjct: 375 AL 376
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 22 LSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPE 81
+S++ + A+ASI QVH +L G +VA+KIQ P VAK + D+ +M +++ +
Sbjct: 177 FASIEKRAAASASIAQVHRAVLPSGEKVAVKIQKPDVAKQMSWDLLVYKYMMYVYDKWIF 236
Query: 82 GMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYY----FVPTVIDELSTGQIL 137
+ L V+ + L EVD+ EA + +E VE Y ++P V E+S +++
Sbjct: 237 HIPLYFTVDYVSERLRSEVDFTTEANNSEHAREGVEETDYLRDKIYIPKVYKEISGKRVM 296
Query: 138 TTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWSNFFYNKDTK 195
TE +G+P+ L S+K I + ++F + + DP+ N K+
Sbjct: 297 VTEWADGIPLYDQTALSEAGMSKKEILTNLFRFLAFQMFHSKQVHCDPHPGNILVRKNQA 356
Query: 196 ---QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 239
Q ++LD G S++F ++ + A DK +L + G
Sbjct: 357 GLCQTVILDHGLYVFESEKFRKEFALLFTAAYSLDKKSILQVMDAWG 403
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 72
ELG + + L +P AAAS+GQV+ G LK G VA+K+Q P + + I DI ++
Sbjct: 162 ELGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDI-YIMRS 220
Query: 73 MKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
+ +W +LV + + E++Y +EA KF +L P +VP++
Sbjct: 221 LSLWARRSVKRLRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVPSIYW 280
Query: 130 ELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQTDPNWSN 187
+ + ++LT E +EG+ + + + H+ ++ ++ LR+L + + DP+ N
Sbjct: 281 QYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHADPHPGN 340
Query: 188 FFYNKDTKQLILLDFG 203
D + L LDFG
Sbjct: 341 LLAMADGR-LAYLDFG 355
>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810,
chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1
SV=1
Length = 692
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVH-AGLLKDGTEVAMKIQYPGVAKGIESD---IDN 68
ELG S + +P AAAS+GQV+ A L + G VA+K+Q PGV I D +
Sbjct: 178 ELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRY 237
Query: 69 LIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 128
+ G++K F L+ +V+ L E+DY EA+ KF++L VP +
Sbjct: 238 IAGLIKKAGRFNSD--LEAVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMY 295
Query: 129 DELSTGQILTTELIEGVPVDQCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNF 188
E ST ++L E +EG +++ DL ++ ++ + +L ++ + DP+ NF
Sbjct: 296 TEYSTSKVLVMEWVEGQKLNEVNDL------YLVEVGVYCSFNQLLEYGFYHADPHPGNF 349
Query: 189 FYNKDTKQLILLDFGATRAYSKEFMDQYIQV 219
D QL LDFG + E D +++
Sbjct: 350 LRTYD-GQLAYLDFGMMGDFRPELRDGFMEA 379
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 22/287 (7%)
Query: 2 PQWQVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKG 61
P+ Q ++ +LG + D +P A+AS+ QVHA LK G EV +K+ PG+
Sbjct: 103 PEDQAIALIERQLGAPVSQLFARFDSQPLASASVAQVHAAQLKSGEEVVVKVVRPGLKPV 162
Query: 62 IESDIDNLIGVMKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEP 118
I D+ L + +I VEV +K + E+D REA + + E
Sbjct: 163 IRQDLAWLFLLARIAERASADARRLRPVEVVSDYEKTIFDELDLLREAANASQLRRNFEG 222
Query: 119 YPYYFVPTVIDELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLR 171
P +VP V +L Q+L E I GVPV DQ D+ K + + +E+
Sbjct: 223 SPLLYVPQVYWDLCRHQVLVMERIYGVPVTDLATLADQRTDM-----KLLAERGVEIFFT 277
Query: 172 ELFQFRYMQTDPNWSNFFYNKDT---KQLILLDFGATRAYSKEFMDQYIQVIKAGADGDK 228
++F+ + D + N F + T Q I +D G + + E D + + A D
Sbjct: 278 QVFRDSFFHADMHPGNIFVSTRTPWSPQYIAIDCGIIGSLTDEDQDYLARNLIAFFKRDY 337
Query: 229 DKVLTISRKMGFLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
KV + G++ ++K+ E EA + TV +F + + + FG
Sbjct: 338 RKVAQLHIDSGWVPA-DTKVNEFEAAIRTVC--EPIFEKPLKDISFG 381
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 5 QVEKVLV-TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIE 63
Q ++++ T LG +S + D P A+ASI QVHA L DG EV +K+ P + I
Sbjct: 101 QTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDGREVVVKVLRPDIEHQIS 160
Query: 64 SDIDNLIGVMK-IWNVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYP 120
DI L + + + P + VA+ E L E+D +RE + E
Sbjct: 161 DDIALLKSLATLVEHTHPNADKIRPCEIVAEIETTLAAELDLQREGANASVLRRFWEASD 220
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRY 178
+VP VI + Q+LT E + G+P D LD RK + + + ++F+ +
Sbjct: 221 DIYVPEVIWSHTAEQVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNF 280
Query: 179 MQTDPNWSNFFYNKD-----TKQLILLDFGATRAYSKEFMDQY 216
D + N + + D + I LDFG S++ DQY
Sbjct: 281 FHADAHSGNIWVDSDPARKSNPRFIALDFGIMGQLSQK--DQY 321
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 30/259 (11%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
QV +V E+G + D P A+AS+ QVH DG +VA+K+Q+ + +
Sbjct: 140 QVCEVFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHDGKKVAVKVQHAHMTD-TAA 198
Query: 65 DIDNLIGVM-----KIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPY 119
+GV+ +I+ F LD + E KEL + V+ K +C F++L P+
Sbjct: 199 ADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKL-SPH 257
Query: 120 --PYYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYESRK------HICKLVMELCLR 171
Y + PT+ LST ++LT E ++G V+ D+D + RK + KLV +
Sbjct: 258 IAEYVYAPTIYWNLSTSKLLTMEFMDGAQVN---DVD-KIRKLGIQPYEVSKLVSQTFAE 313
Query: 172 ELFQFRYMQTDPNWSNF-----------FYNKDTKQLILLDFGATRAYSKEFMDQYIQVI 220
+F+ ++ DP+ +N Y K QL++LD G + Y +
Sbjct: 314 MMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKELDFNTRFNYASLW 373
Query: 221 KAGADGDKDKVLTISRKMG 239
KA D + S K+G
Sbjct: 374 KALVFSDAKAIKEHSEKLG 392
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK----DGTEVAMKIQYPGVAK 60
+VEK+ E G + P +AS+ QVH LK + EVA+K+QYPG+
Sbjct: 295 EVEKLFKIETGKHPDDMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMN 354
Query: 61 GIESDIDNLIGVMKIWNVFPEGMFLDNLVEVAKKELGWEVDYKREAECTRKFKELVEPYP 120
+ D+D+L V+ +F ++ A L E+D+ EA+ + K K+L
Sbjct: 355 KFQKDMDSLDNVLTYITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQLFIGNQ 414
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRY 178
+P V +T +ILT E I GV +D LD K + L ++ +++F +
Sbjct: 415 QLSIPKVYWNHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDIFAQQIFVHGF 474
Query: 179 MQTDPNWSNFFYNKDTK---QLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTIS 235
+ +DP+ N K L+LLD G + + + + K+ GD +
Sbjct: 475 LHSDPHPGNLLVRKTPNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCLGDAKTSEFYA 534
Query: 236 RKMG 239
++G
Sbjct: 535 ERLG 538
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
Q K++ +LG S D+ P A+AS+ QVHA LK G EV +K+ PG+ I
Sbjct: 106 QSMKLIEEQLGKKISEVFSRFDVDPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIGQ 165
Query: 65 DIDNLIGVMKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPY 121
D+ L + + F L + V+V +K + E+D REA + K E P
Sbjct: 166 DLAWLFILARAAERFSADARLLHPVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPL 225
Query: 122 YFVPTVIDELSTGQILTTELIEGVPVDQCVDL--DYESRKHICKLVMELCLRELFQFRYM 179
+VP V + ++L E I GV V L K + + +E+ ++F+ +
Sbjct: 226 LYVPQVYWDWCRPKVLVMERIYGVQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFF 285
Query: 180 QTDPNWSNFF---YNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISR 236
D + N F N + Q I +D G + + E D + + A D +V +
Sbjct: 286 HADMHPGNIFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHI 345
Query: 237 KMGFLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
G++ E+K+ E EA + TV +F + + + FG
Sbjct: 346 DSGWVPA-ETKLNEFEAAIRTV--CEPIFEKPLKDISFG 381
>sp|Q2SN14|UBIB_HAHCH Probable ubiquinone biosynthesis protein UbiB OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiB PE=3 SV=1
Length = 546
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 29 PFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMK-IWNVFPEGMFLDN 87
P A+ASI QVHA LK+G EV +K+ PG+ K I DI ++ V + + N + +G L +
Sbjct: 126 PMASASIAQVHAATLKNGKEVVVKVIRPGIEKTIRLDIALMLLVARLVENYWEDGKRL-H 184
Query: 88 LVEVAK---KELGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQILTTELIEG 144
VEV K + E+D +REA T + K ++P V E++ ++L E I G
Sbjct: 185 PVEVVKDYEHTIIDELDLQREAANTSQLKRNFAGSELIYIPEVYWEMTHSRVLVMERIYG 244
Query: 145 VPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWSNFFY---NKDTKQLIL 199
VP+ L + K + + +E+ ++F+ + D + N F N + I
Sbjct: 245 VPIADVEQLRKANVNMKLLAERGVEIFFTQVFRDSFFHADMHPGNIFVDVSNPANPRYIA 304
Query: 200 LDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGYESKIMEEAHVNTVMI 259
+D G + E + + A D +V + G++ G+ EA + TV
Sbjct: 305 IDCGIVGTLTPEDQSYLARNLLAFFRRDYRQVAVLHISSGWVPGHTRVNEFEAAIRTV-- 362
Query: 260 LSEVFSEKIGEFDFG 274
+F + + FG
Sbjct: 363 CEPIFERPLKDISFG 377
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 127/287 (44%), Gaps = 29/287 (10%)
Query: 6 VEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-----GTEVAMKIQYPGVAK 60
+V+ LG + DLKP A+AS+ QVH L+ G EVA+K+ PG+
Sbjct: 100 ARQVVERSLGRKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILP 159
Query: 61 GIESDIDNLIGVMKIW--NVFPEGMFLDNLVEVAK--KELGWEVDYKREAECTRKFKELV 116
IE D+ +L+ + W +F +G L VA+ K L E+D EA + +
Sbjct: 160 VIEQDL-SLMRTLAGWVEKLFADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNF 218
Query: 117 EPYPYYFVPTVIDELSTGQILTTELIEGVPVDQC-------VDLDYESRKHICKLVMELC 169
+ VP V + S+ ++LT E + G+PV Q VDL + + + +E+
Sbjct: 219 KGSDMLIVPEVFYDYSSREVLTLEWMHGIPVGQIERLREAGVDL-----QKLSRFGVEIF 273
Query: 170 LRELFQFRYMQTDPNWSNFFYNKDTKQLILLDFGATRAYSKEFMDQYIQVIK--AGADGD 227
++F+ + D + N F D + I LDFG + + D++ + A + D
Sbjct: 274 FTQVFRHGFFHADMHPGNIFVAADGR-YIALDFGIVGSLTD--TDKHYLAVNFLAFFNRD 330
Query: 228 KDKVLTISRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
+V T + G++ EA V TV +F + + E FG
Sbjct: 331 YHRVATAHIESGWVPRDTRAEELEAAVRTVC--EPIFEKPLSEISFG 375
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 5 QVEKVLV-TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIE 63
Q ++++ T LG +S + D P A+ASI QVHA L D EV +K+ P + I
Sbjct: 101 QTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRREVVVKVLRPDIEHQIS 160
Query: 64 SDIDNLIGVMK-IWNVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYP 120
DI L + + + P + VA+ E L E+D +RE + E
Sbjct: 161 DDIALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANASVLRRFWEASD 220
Query: 121 YYFVPTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRY 178
+VP VI + ++LT E + G+P D LD RK + + + ++F+ +
Sbjct: 221 DIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNF 280
Query: 179 MQTDPNWSNFFYNKD-----TKQLILLDFGATRAYSKEFMDQY 216
D + N + + D + I LDFG S++ DQY
Sbjct: 281 FHADAHSGNIWVDSDPARKSNPRFIALDFGIMGQLSQK--DQY 321
>sp|B6EHA6|UBIB_ALISL Probable ubiquinone biosynthesis protein UbiB OS=Aliivibrio
salmonicida (strain LFI1238) GN=ubiB PE=3 SV=1
Length = 543
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 11/270 (4%)
Query: 14 LGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIGV 72
LG ++ + D+ P A+ASI QVH LK+ G E+ +K+ P + IE+DI + +
Sbjct: 113 LGGPLENWFTDFDIVPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIEADIRLMYRM 172
Query: 73 MK-IWNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
+ PE L ++E +K L E+D +REA + + E +VP VI
Sbjct: 173 ATLVEKHIPEARRLKPVEVIEEYEKTLIDELDLRREASNAMQLRRNFEGSEELYVPEVIL 232
Query: 130 ELSTGQILTTELIEGVPVDQCVDLDYE--SRKHICKLVMELCLRELFQFRYMQTDPNWSN 187
++S+ ++ +E I G+ V L+ + K + + + + ++F+ + D + N
Sbjct: 233 DVSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGN 292
Query: 188 FFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGY 244
F N D Q I LD G +KE + + + D KV + G++
Sbjct: 293 VFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYRKVAQLHIDSGWVPAE 352
Query: 245 ESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
+ +EE ++ +F++ +GE FG
Sbjct: 353 TN--VEEFEFAIRIVCEPIFAKPLGEISFG 380
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 7 EKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 66
+V LG + +S D P A+ASI QVH G+L DG EVA+K+ P V IE+D+
Sbjct: 102 RAAVVQSLGRPIEEVFASFDADPVASASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADL 161
Query: 67 DNLIGVMKIW--NVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYY 122
L+ V W + P+G L VA+ + L E+D REA + + +
Sbjct: 162 -ALLRVAAAWLERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLI 220
Query: 123 FVPTVIDELSTGQILTTELIEGVPVDQC 150
+P +I +LS+ ++L E + GVP+ Q
Sbjct: 221 MLPEMIWDLSSAEVLVMERMHGVPISQI 248
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 8 KVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDID 67
K++ +LG S D++P A+AS+ QVHA LK G EV +K+ PG+ I D+
Sbjct: 109 KLIEEQLGKKISEVFSRFDVEPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIAQDLA 168
Query: 68 NLIGVMKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFV 124
L + + L + V+V +K + E+D REA + K E P +V
Sbjct: 169 WLFILARAAEKVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYV 228
Query: 125 PTVIDELSTGQILTTELIEGVPVDQCVDLDYESR--KHICKLVMELCLRELFQFRYMQTD 182
P V + ++L E I G+ V L + K + + +E+ ++F+ + D
Sbjct: 229 PQVYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHAD 288
Query: 183 PNWSNFF---YNKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 239
+ N F N + Q I +D G + + E D + + A D +V + G
Sbjct: 289 MHPGNIFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSG 348
Query: 240 FLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
++ E+K+ E EA + TV +F + + + FG
Sbjct: 349 WVPA-ETKLNEFEAAIRTVC--EPIFEKPLKDISFG 381
>sp|C3LPS7|UBIB_VIBCM Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1
Length = 544
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 13/280 (4%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIE 63
Q ++++ ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I+
Sbjct: 104 QAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQID 163
Query: 64 SDIDNLIGVMKI-WNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPY 119
+DI + V +I PE L VEV + K L E+D +REA + + E
Sbjct: 164 ADIKLMYRVARIVAKALPEARRLKP-VEVVREYEKTLLDELDLRREAANAIQLRRNFENS 222
Query: 120 PYYFVPTVIDELSTGQILTTELIEGVPVDQCVDL--DYESRKHICKLVMELCLRELFQFR 177
+VP V+ + ++ +E I G+ V L + + K + + + + ++F+
Sbjct: 223 EELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDS 282
Query: 178 YMQTDPNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTI 234
+ D + N F N + Q I LD G + E + A + D +V +
Sbjct: 283 FFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQL 342
Query: 235 SRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
G++ + ++E V M+ +F++ + E FG
Sbjct: 343 HVDSGWVPLDTN--VDEFEVAIRMVCEPIFAKPLCEISFG 380
>sp|Q9KVQ4|UBIB_VIBCH Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=ubiB PE=3 SV=1
Length = 544
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 13/280 (4%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIE 63
Q ++++ ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I+
Sbjct: 104 QAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQID 163
Query: 64 SDIDNLIGVMKI-WNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPY 119
+DI + V +I PE L VEV + K L E+D +REA + + E
Sbjct: 164 ADIKLMYRVARIVAKALPEARRLKP-VEVVREYEKTLLDELDLRREAANAIQLRRNFENS 222
Query: 120 PYYFVPTVIDELSTGQILTTELIEGVPVDQCVDL--DYESRKHICKLVMELCLRELFQFR 177
+VP V+ + ++ +E I G+ V L + + K + + + + ++F+
Sbjct: 223 EELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDS 282
Query: 178 YMQTDPNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTI 234
+ D + N F N + Q I LD G + E + A + D +V +
Sbjct: 283 FFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQL 342
Query: 235 SRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
G++ + ++E V M+ +F++ + E FG
Sbjct: 343 HVDSGWVPLDTN--VDEFEVAIRMVCEPIFAKPLCEISFG 380
>sp|A5F4G3|UBIB_VIBC3 Probable ubiquinone biosynthesis protein UbiB OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=ubiB PE=3 SV=1
Length = 544
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 13/280 (4%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLK-DGTEVAMKIQYPGVAKGIE 63
Q ++++ ELG ++ D+KP A+ASI QVH LK +G +V +K+ P + I+
Sbjct: 104 QAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQID 163
Query: 64 SDIDNLIGVMKI-WNVFPEGMFLDNLVEVAK---KELGWEVDYKREAECTRKFKELVEPY 119
+DI + V +I PE L VEV + K L E+D +REA + + E
Sbjct: 164 ADIKLMYRVARIVAKALPEARRLKP-VEVVREYEKTLLDELDLRREAANAIQLRRNFENS 222
Query: 120 PYYFVPTVIDELSTGQILTTELIEGVPVDQCVDL--DYESRKHICKLVMELCLRELFQFR 177
+VP V+ + ++ +E I G+ V L + + K + + + + ++F+
Sbjct: 223 EELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDS 282
Query: 178 YMQTDPNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTI 234
+ D + N F N + Q I LD G + E + A + D +V +
Sbjct: 283 FFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQL 342
Query: 235 SRKMGFLTGYESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
G++ + ++E V M+ +F++ + E FG
Sbjct: 343 HVDSGWVPLDTN--VDEFEVAIRMVCEPIFAKPLCEISFG 380
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 20/231 (8%)
Query: 25 LDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGVMKIWNVFPEG-- 82
++ P A+AS+GQVH +L G V +K+Q PG+ + D + L +++ + G
Sbjct: 128 FEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQTLRLAKRWLPGFR 187
Query: 83 -MFLDNLVEVAKKE----LGWEVDYKREAECTRKFKELVEPYPYYFVPTVIDELSTGQIL 137
+ +E +E L E+DY E + +F++ YP VP + + +T +L
Sbjct: 188 RLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVPEIYWQYTTRMVL 247
Query: 138 TTELIEGVPVD-------QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSNFFY 190
T E + G+ VD ++LD + IC + +L + F Q+DP+ N
Sbjct: 248 TLEYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFF-----QSDPHPGNMAV 302
Query: 191 NKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFL 241
+ LI DFG DQ +Q A D ++VL MG +
Sbjct: 303 DSQGD-LIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLV 352
>sp|B0KM38|UBIB_PSEPG Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain GB-1) GN=ubiB PE=3 SV=1
Length = 540
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 12/271 (4%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 72
+LG S D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L +
Sbjct: 115 QLGAKVGEVFSRFDVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDLAWLFLI 174
Query: 73 MKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
K + VE+ +K + E+D REA + + E +VP V
Sbjct: 175 AKAAERASADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYW 234
Query: 130 ELSTGQILTTELIEGVPVDQCVDLDYESR--KHICKLVMELCLRELFQFRYMQTDPNWSN 187
+L ++L E I GVPV V L + K + + +E+ ++F+ + D + N
Sbjct: 235 DLCRPKVLVMERIYGVPVTDMVTLADQRTDMKLLAERGVEVFFTQVFRDSFFHADMHPGN 294
Query: 188 FFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGY 244
F + + Q I +D G + + E D + + A D +V + G++ +
Sbjct: 295 IFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSGWVPAH 354
Query: 245 ESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
+K+ E EA + TV +F + + + FG
Sbjct: 355 -TKVNEFEAAIRTVC--EPIFEKPLKDISFG 382
>sp|B1J2S6|UBIB_PSEPW Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain W619) GN=ubiB PE=3 SV=1
Length = 539
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 22/284 (7%)
Query: 5 QVEKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIES 64
Q ++ ++LG S D++P A+AS+ QVHA LK G EV +K+ PG+ I
Sbjct: 106 QAVALIESQLGAKVGEVFSRFDVEPLASASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQ 165
Query: 65 DIDNLIGVMKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPY 121
D+ L + K + VE+ +K + E+D REA + + E
Sbjct: 166 DLAWLFLIAKGAERASADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSEL 225
Query: 122 YFVPTVIDELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLRELF 174
+VP V +L ++L E I GVPV DQ D+ K + + +E+ ++F
Sbjct: 226 MYVPQVYWDLCRPKVLVMERIYGVPVTDMATLADQRTDM-----KLLAERGVEVFFTQVF 280
Query: 175 QFRYMQTDPNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKV 231
+ + D + N F + + Q I +D G + + E D + + A D +V
Sbjct: 281 RHSFFHADMHPGNIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRV 340
Query: 232 LTISRKMGFLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
+ G++ + +K+ E EA + TV +F + + + FG
Sbjct: 341 AELHIDSGWVPAH-TKVNEFEAAIRTV--CEPIFEKPLKDISFG 381
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 7 EKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 66
++ T LG +S + D P A+ASI QVHA L D V +K+ P + I DI
Sbjct: 104 RSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDIEHQISDDI 163
Query: 67 DNLIGVMK-IWNVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYF 123
L + + + P + VA+ E L E+D +RE + E +
Sbjct: 164 ALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANASVLRRFWEASDDIY 223
Query: 124 VPTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQT 181
VP VI + ++LT E + G+P D LD RK + + + ++F+ +
Sbjct: 224 VPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHA 283
Query: 182 DPNWSNFFYNKD-----TKQLILLDFGATRAYSKEFMDQY 216
D + N + + D + I+LDFG S++ DQY
Sbjct: 284 DAHSGNIWVDSDPARKSNPRFIVLDFGIMGQLSQK--DQY 321
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 7 EKVLVTELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDI 66
++ T LG +S + D P A+ASI QVHA L D V +K+ P + I DI
Sbjct: 104 RSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDIEHQISDDI 163
Query: 67 DNLIGVMK-IWNVFPEGMFLDNLVEVAKKE--LGWEVDYKREAECTRKFKELVEPYPYYF 123
L + + + P + VA+ E L E+D +RE + E +
Sbjct: 164 ALLKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANASVLRRFWEASDDIY 223
Query: 124 VPTVIDELSTGQILTTELIEGVPVDQCVDLDYES--RKHICKLVMELCLRELFQFRYMQT 181
VP VI + ++LT E + G+P D LD RK + + + ++F+ +
Sbjct: 224 VPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHA 283
Query: 182 DPNWSNFFYNKD-----TKQLILLDFGATRAYSKEFMDQY 216
D + N + + D + I+LDFG S++ DQY
Sbjct: 284 DAHSGNIWVDSDPARKSNPRFIVLDFGIMGQLSQK--DQY 321
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 22/276 (7%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 72
+LG S D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L +
Sbjct: 115 QLGAKVGEVFSRFDVEPLASASVAQVHAARLKSGEEVVVKVVRPGLKPVIAQDLAWLFLI 174
Query: 73 MKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
K + VE+ +K + E+D REA + + E +VP V
Sbjct: 175 AKAAERASADARRLHPVEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYW 234
Query: 130 ELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTD 182
+L ++L E I GVPV DQ D+ K + + +E+ ++F+ + D
Sbjct: 235 DLCRPKVLVMERIYGVPVTDMATLADQRTDM-----KMLAERGVEVFFTQVFRDSFFHAD 289
Query: 183 PNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 239
+ N F + + Q I +D G + + E D + + A D +V + G
Sbjct: 290 MHPGNIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSG 349
Query: 240 FLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
++ ++K+ E EA + TV +F + + + FG
Sbjct: 350 WVPA-QTKVNEFEAAIRTVC--EPIFEKPLKDISFG 382
>sp|B7VHC3|UBIB_VIBSL Probable ubiquinone biosynthesis protein UbiB OS=Vibrio splendidus
(strain LGP32) GN=ubiB PE=3 SV=1
Length = 544
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 14 LGPDWKSKLSSLDLKPFAAASIGQVHAGLLKD-GTEVAMKIQYPGVAKGIESDIDNLIGV 72
LG + + D++P A+ASI QVH LK+ G E+ +K+ P + I++D+ + +
Sbjct: 113 LGGRLDNWFTDFDIEPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIDADLKLMHRM 172
Query: 73 MKI-WNVFPEGMFLD--NLVEVAKKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
+I PE L +V +K L E+D +REA + + E +VP VI
Sbjct: 173 ARIVAKSLPEARRLKPVEVVHEYEKTLLDELDLRREAANAIQLRRNFEGSEELYVPEVIP 232
Query: 130 ELSTGQILTTELIEGVPVD--QCVDLDYESRKHICKLVMELCLRELFQFRYMQTDPNWSN 187
+LS+ ++ +E I G+ V + ++ + + K + + + + ++F+ + D + N
Sbjct: 233 DLSSETLMVSERIYGIQVSDIETLEANGTNMKLLAERGVTVFFTQVFRDSFFHADMHPGN 292
Query: 188 FFY---NKDTKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMGFLTGY 244
F N D Q I LD G + E + + A + D KV + G++ +
Sbjct: 293 VFVNPENPDNPQWIGLDCGIVGTLNSEDKRYLAENLLAFFNRDYRKVAELHVDSGWVP-H 351
Query: 245 ESKIMEEAHVNTVMILSEVFSEKIGEFDFG 274
++ + + M+ +F++ +GE FG
Sbjct: 352 DTNV-NDFEFAIRMVCEPIFAKPLGEISFG 380
>sp|Q4KJL4|UBIB_PSEF5 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiB PE=3
SV=1
Length = 534
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 22/277 (7%)
Query: 12 TELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIG 71
+LG S D++P A+AS+ QVHA LK G EV +K+ PG+ I D+ L
Sbjct: 113 AQLGKKISDVFSRFDIEPLASASVAQVHAAKLKTGEEVVVKVIRPGLKPIIAQDLAWLFI 172
Query: 72 VMKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVI 128
+ + L + V+V +K + E+D REA + K E P +VP V
Sbjct: 173 LARAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVY 232
Query: 129 DELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQT 181
+ ++L E I G+ V DQ D+ K + + +E+ ++F+ +
Sbjct: 233 WDWCRPKVLVMERIYGIQVTDLATLADQRTDM-----KMLAERGVEIFFTQVFRDSFFHA 287
Query: 182 DPNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKM 238
D + N F + + Q I +D G + + E D + + A D +V +
Sbjct: 288 DMHPGNIFVSTVQPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDS 347
Query: 239 GFLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
G++ E+K+ E EA + TV +F + + + FG
Sbjct: 348 GWVPA-ETKLNEFEAAIRTVC--EPIFEKPLKDISFG 381
>sp|B7V3F8|UBIB_PSEA8 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain LESB58) GN=ubiB PE=3 SV=1
Length = 533
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 22/276 (7%)
Query: 13 ELGPDWKSKLSSLDLKPFAAASIGQVHAGLLKDGTEVAMKIQYPGVAKGIESDIDNLIGV 72
+LG + + + +P A+AS+ QVHA LK G EV +K+ P + I SDI L +
Sbjct: 115 QLGAKIEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFIL 174
Query: 73 MKIWNVFPEGMFLDNLVEVA---KKELGWEVDYKREAECTRKFKELVEPYPYYFVPTVID 129
++ + VEV +K + E+D REA + + E P +VP V
Sbjct: 175 ARLAERVSSEARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYW 234
Query: 130 ELSTGQILTTELIEGVPV-------DQCVDLDYESRKHICKLVMELCLRELFQFRYMQTD 182
+ ++L E I G+PV DQ D K + + +E+ ++F+ + D
Sbjct: 235 DWCRPKVLVMERIYGIPVTDLETLRDQRTDF-----KALAERGVEIFFTQVFRDSFFHAD 289
Query: 183 PNWSNFFYNKD---TKQLILLDFGATRAYSKEFMDQYIQVIKAGADGDKDKVLTISRKMG 239
+ N F + + Q I +D G + + E D + + A D KV + G
Sbjct: 290 MHPGNIFVSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSG 349
Query: 240 FLTGYESKIME-EAHVNTVMILSEVFSEKIGEFDFG 274
++ E+K+ + EA + TV +F + + + FG
Sbjct: 350 WVPA-ETKVNDFEAAIRTVC--EPIFEKPLKDISFG 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,304,282
Number of Sequences: 539616
Number of extensions: 5551784
Number of successful extensions: 13714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 13421
Number of HSP's gapped (non-prelim): 218
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)