Your job contains 1 sequence.
>psy16215
MTSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHM
RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT
DVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTE
DFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSM
LYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGI
DHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQL
LTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLFLGLS
ASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQL
ALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSN
ASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECL
SPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELP
LVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYE
TTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSK
SCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTK
FLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNE
MCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIICDKCSQP
IDINELQEHQDYHFALELSTTSEPPNSTSNISNSSSSSKILNKKSSKRGRPSKLNSFKNS
ENFKKLKTIDQFFKPKSQSLS
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16215
(1041 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060421-4949 - symbol:polh "polymerase (DNA ... 1034 2.8e-113 3
FB|FBgn0037141 - symbol:DNApol-eta "DNApol-eta" species:7... 994 4.0e-110 3
RGD|1309893 - symbol:Polh "polymerase (DNA directed), eta... 991 3.5e-109 3
UNIPROTKB|E2RC81 - symbol:POLH "Uncharacterized protein" ... 987 1.2e-108 3
UNIPROTKB|F1RRJ6 - symbol:POLH "Uncharacterized protein" ... 970 2.2e-105 2
MGI|MGI:1891457 - symbol:Polh "polymerase (DNA directed),... 975 2.8e-105 2
UNIPROTKB|Q9Y253 - symbol:POLH "DNA polymerase eta" speci... 981 5.8e-105 2
UNIPROTKB|F1MZ79 - symbol:POLH "Uncharacterized protein" ... 957 2.8e-103 2
UNIPROTKB|F1NAG6 - symbol:POLH "Uncharacterized protein" ... 889 3.0e-98 3
UNIPROTKB|F1NCM3 - symbol:POLH "Uncharacterized protein" ... 889 3.0e-98 3
UNIPROTKB|B4DG64 - symbol:POLH "DNA polymerase eta" speci... 776 2.5e-83 2
TAIR|locus:2156309 - symbol:POLH "Y-family DNA polymerase... 777 8.3e-81 2
WB|WBGene00018721 - symbol:polh-1 species:6239 "Caenorhab... 653 6.8e-68 3
UNIPROTKB|I3LUT8 - symbol:LOC100737500 "Uncharacterized p... 395 1.5e-35 1
ASPGD|ASPL0000072145 - symbol:AN4678 species:162425 "Emer... 287 2.0e-33 3
POMBASE|SPBC16A3.11 - symbol:eso1 "sister chromatid cohes... 355 1.9e-32 2
UNIPROTKB|Q9UNA4 - symbol:POLI "DNA polymerase iota" spec... 239 6.3e-29 2
RGD|1305212 - symbol:Poli "polymerase (DNA directed), iot... 237 7.8e-29 2
UNIPROTKB|F1PDA5 - symbol:POLI "Uncharacterized protein" ... 241 3.7e-28 4
UNIPROTKB|G5EH81 - symbol:MGCH7_ch7g688 "Sister chromatid... 346 4.3e-28 2
ZFIN|ZDB-GENE-050417-376 - symbol:poli "polymerase (DNA d... 199 7.9e-27 2
UNIPROTKB|J3KTN3 - symbol:POLI "DNA polymerase iota" spec... 178 7.4e-24 2
TAIR|locus:2031050 - symbol:AT1G49980 species:3702 "Arabi... 173 1.4e-22 3
UNIPROTKB|Q83EN5 - symbol:dinP "DNA polymerase IV" specie... 182 5.0e-22 2
TIGR_CMR|CBU_0280 - symbol:CBU_0280 "DNA-damage-inducible... 182 5.0e-22 2
UNIPROTKB|Q47155 - symbol:dinB species:83333 "Escherichia... 173 9.2e-22 2
CGD|CAL0002818 - symbol:RAD32 species:5476 "Candida albic... 229 1.6e-21 3
UNIPROTKB|Q8EHU9 - symbol:dinB "DNA polymerase IV" specie... 177 3.9e-21 2
TIGR_CMR|SO_1114 - symbol:SO_1114 "DNA-damage-inducible p... 177 3.9e-21 2
FB|FBgn0037554 - symbol:DNApol-iota "DNApol-iota" species... 178 9.0e-21 3
TIGR_CMR|CPS_1040 - symbol:CPS_1040 "DNA polymerase IV" s... 171 4.6e-20 2
UNIPROTKB|Q5Q9G8 - symbol:POLK "Polymerase kappa isoform ... 247 3.6e-19 2
UNIPROTKB|Q9UBT6 - symbol:POLK "DNA polymerase kappa" spe... 247 5.2e-19 2
UNIPROTKB|Q74H50 - symbol:dinB "DNA polymerase IV" specie... 166 2.0e-18 2
TIGR_CMR|GSU_0043 - symbol:GSU_0043 "ImpB/MucB/SamB famil... 166 2.0e-18 2
UNIPROTKB|Q81M86 - symbol:dinB "DNA polymerase IV" specie... 198 2.2e-18 2
TIGR_CMR|BA_4366 - symbol:BA_4366 "DNA-damage-inducible p... 198 2.2e-18 2
UNIPROTKB|J3KQ09 - symbol:POLI "DNA polymerase iota" spec... 246 2.8e-18 2
MGI|MGI:1349767 - symbol:Polk "polymerase (DNA directed),... 165 3.5e-18 3
UNIPROTKB|F1MHR0 - symbol:POLI "Uncharacterized protein" ... 155 3.6e-18 3
UNIPROTKB|Q8AWW1 - symbol:DINB1 "Uncharacterized protein"... 263 1.6e-17 2
UNIPROTKB|Q5Q9G7 - symbol:POLK "DNA polymerase kappa" spe... 244 3.3e-17 1
UNIPROTKB|G3V8W7 - symbol:Polk "Protein Polk" species:101... 164 4.6e-17 5
UNIPROTKB|J3KSW2 - symbol:POLI "DNA polymerase iota" spec... 172 6.0e-17 2
UNIPROTKB|F1NCT8 - symbol:POLK "Uncharacterized protein" ... 260 6.8e-17 2
UNIPROTKB|D6RAE5 - symbol:POLK "DNA polymerase kappa" spe... 236 1.1e-16 1
UNIPROTKB|Q5Q9G5 - symbol:POLK "DNA polymerase kappa" spe... 237 1.6e-16 1
TIGR_CMR|CHY_1651 - symbol:CHY_1651 "DNA polymerase IV - ... 165 1.9e-16 2
ASPGD|ASPL0000012133 - symbol:AN3909 species:162425 "Emer... 165 2.4e-16 2
UNIPROTKB|A6QNV6 - symbol:POLK "Uncharacterized protein" ... 236 3.0e-16 2
UNIPROTKB|F1S2I2 - symbol:POLK "Uncharacterized protein" ... 160 4.6e-16 3
UNIPROTKB|F1NCT7 - symbol:POLK "Uncharacterized protein" ... 245 4.6e-16 2
UNIPROTKB|J3QR36 - symbol:POLI "DNA polymerase iota" spec... 162 5.1e-16 2
UNIPROTKB|D6R9M8 - symbol:POLK "DNA polymerase kappa" spe... 230 7.5e-16 1
MGI|MGI:1347081 - symbol:Poli "polymerase (DNA directed),... 235 7.6e-16 1
ASPGD|ASPL0000030996 - symbol:AN5620 species:162425 "Emer... 228 2.8e-15 1
UNIPROTKB|J3KRG0 - symbol:POLI "DNA polymerase iota" spec... 125 1.0e-14 2
ZFIN|ZDB-GENE-060526-137 - symbol:polk "polymerase (DNA d... 162 1.2e-14 3
UNIPROTKB|F1P5H4 - symbol:REV1 "DNA repair protein REV1" ... 127 2.1e-14 4
UNIPROTKB|Q9KPS5 - symbol:dinB "DNA polymerase IV" specie... 159 2.8e-14 2
TIGR_CMR|VC_2287 - symbol:VC_2287 "DNA-damage-inducible p... 159 2.8e-14 2
TAIR|locus:2156319 - symbol:REV1 species:3702 "Arabidopsi... 141 3.1e-14 2
POMBASE|SPBC1347.01c - symbol:rev1 "deoxycytidyl transfer... 145 3.3e-14 2
UNIPROTKB|E9PST4 - symbol:Polk "Protein Polk" species:101... 164 5.5e-14 5
UNIPROTKB|Q4KWZ7 - symbol:REV1 "DNA repair protein REV1" ... 127 5.8e-14 5
SGD|S000002827 - symbol:RAD30 "DNA polymerase eta, involv... 130 6.3e-14 4
ZFIN|ZDB-GENE-081105-180 - symbol:si:dkey-57a22.7 "si:dke... 153 2.1e-13 4
UNIPROTKB|Q3ZAI3 - symbol:dinB "DNA polymerase IV" specie... 147 2.6e-13 3
TIGR_CMR|DET_0011 - symbol:DET_0011 "DNA polymerase IV, p... 147 2.6e-13 3
UNIPROTKB|E9PST3 - symbol:Polk "Protein Polk" species:101... 164 2.6e-13 5
UNIPROTKB|Q5JTF2 - symbol:POLH "DNA polymerase eta" speci... 184 5.3e-13 1
UNIPROTKB|F1STE9 - symbol:REV1 "Uncharacterized protein" ... 128 1.3e-12 4
DICTYBASE|DDB_G0287149 - symbol:DDB_G0287149 "UMUC-like D... 132 1.4e-12 2
UNIPROTKB|Q0BZW2 - symbol:dinB "DNA polymerase IV" specie... 153 2.3e-12 2
TIGR_CMR|SPO_3280 - symbol:SPO_3280 "DNA polymerase IV, p... 141 4.3e-12 2
WB|WBGene00017696 - symbol:polk-1 species:6239 "Caenorhab... 207 8.4e-12 3
POMBASE|SPCC553.07c - symbol:kpa1 "DinB translesion DNA r... 130 3.0e-11 2
UNIPROTKB|P63985 - symbol:dinB1 "DNA polymerase IV 1" spe... 126 4.3e-11 3
UNIPROTKB|F1S1Z7 - symbol:POLI "Uncharacterized protein" ... 194 2.1e-10 2
ASPGD|ASPL0000039840 - symbol:AN3373 species:162425 "Emer... 143 3.4e-10 3
UNIPROTKB|J9P5L3 - symbol:POLK "Uncharacterized protein" ... 183 7.2e-10 2
UNIPROTKB|E2RAS5 - symbol:POLK "Uncharacterized protein" ... 183 7.4e-10 2
UNIPROTKB|Q74CQ6 - symbol:dinB "DNA polymerase IV" specie... 170 3.0e-09 1
TIGR_CMR|GSU_1616 - symbol:GSU_1616 "ImpB/MucB/SamB famil... 170 3.0e-09 1
CGD|CAL0001748 - symbol:orf19.4412 species:5476 "Candida ... 112 2.1e-08 3
UNIPROTKB|Q71Y46 - symbol:dinB "DNA polymerase IV" specie... 164 6.1e-08 2
DICTYBASE|DDB_G0302588 - symbol:DDB_G0302588 "RanBP2-type... 163 1.4e-07 2
UNIPROTKB|D4A662 - symbol:Polk "Protein Polk" species:101... 164 1.5e-07 2
FB|FBgn0035150 - symbol:Rev1 "Rev1" species:7227 "Drosoph... 142 1.8e-07 3
UNIPROTKB|F1N787 - symbol:REV1 "Uncharacterized protein" ... 154 8.4e-07 1
UNIPROTKB|P04152 - symbol:umuC species:83333 "Escherichia... 145 1.7e-06 1
DICTYBASE|DDB_G0270444 - symbol:DDB_G0270444 "protein kin... 151 2.1e-06 1
UNIPROTKB|P63987 - symbol:dinB2 "DNA polymerase IV 2" spe... 142 2.5e-06 1
RGD|1306715 - symbol:Rev1 "REV1, polymerase (DNA directed... 148 3.4e-06 1
FB|FBgn0037836 - symbol:CG14692 species:7227 "Drosophila ... 152 3.5e-06 1
UNIPROTKB|E2RPL9 - symbol:REV1 "Uncharacterized protein" ... 155 4.3e-06 2
UNIPROTKB|Q9UBZ9 - symbol:REV1 "DNA repair protein REV1" ... 147 5.0e-06 1
UNIPROTKB|F1MAB3 - symbol:Polk "Protein Polk" species:101... 147 5.2e-06 4
CGD|CAL0004744 - symbol:orf19.6712 species:5476 "Candida ... 141 9.7e-06 1
UNIPROTKB|Q5ADY0 - symbol:CaO19.14004 "Putative uncharact... 141 9.7e-06 1
WARNING: Descriptions of 49 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-060421-4949 [details] [associations]
symbol:polh "polymerase (DNA directed), eta"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 ZFIN:ZDB-GENE-060421-4949 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AL929536 IPI:IPI00758987 Ensembl:ENSDART00000139589
OMA:MKSLEKH ArrayExpress:F1Q7Z9 Bgee:F1Q7Z9 Uniprot:F1Q7Z9
Length = 749
Score = 1034 (369.0 bits), Expect = 2.8e-113, Sum P(3) = 2.8e-113
Identities = 249/630 (39%), Positives = 352/630 (55%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCFY QVE +L P L KP V QY TWKGGGIIAV+YEAR GV R+M D
Sbjct: 7 RVVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFAD 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+A++ CP++++ RVP GKAD++ YR A EVI V+S F+ ++ERASIDEAY+DLT V
Sbjct: 67 DARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRFA-VIERASIDEAYMDLTASV 125
Query: 124 HERMK--SIGHIAASQLSNTFVVGFGP--DNN--DEDA-RKAGVMEWLGQVYSDTDTSLM 176
ER+K S+ I A QL NT + GF +N D DA R AG+ +WL + S T++S
Sbjct: 126 QERLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESS-- 183
Query: 177 ENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQS 236
D + LA+ +IVE++RAAV T F CSAGI+HNKVLAKL CGL+KP +Q++LP S
Sbjct: 184 --PADLR-LAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQTVLPLS 240
Query: 237 SVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYI 296
SV L++ L I K+R+LGGKLG + ETL M +L +FS QL+ HF +KT WLY +
Sbjct: 241 SVPQLFSTLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDL 300
Query: 297 ARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKR 356
RGI+ EPV R + KSIGC K F GKTCL T+Q V +W+ +LA E+ ERL D +N R
Sbjct: 301 CRGIEFEPVKPRQLPKSIGCSKNFAGKTCLRTKQQVQYWLHQLALELEERLNKDRDVNGR 360
Query: 357 RAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDL-TPPLL 415
A+ LTV Q + S SR AL Y + S+ +I N+A + +P L
Sbjct: 361 VARQLTVGVRQAGGQRSGSFSRCCALVRYDAMKMTNDSLTIIKSLNTAGAHQEAWSPALT 420
Query: 416 FLGLSASKFS--PLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFN 473
L LSASKFS P S I F P S+ SS ++KR +
Sbjct: 421 LLHLSASKFSDAPSSSSAGITGFLSSDAASSP--SQSSSSQRSPMERPAQKRKRQQDQRQ 478
Query: 474 QQTPFQLALNRIERKLIDKFKSHIESKL---DSCNANVDKLVIGDISEQIKNIAAENVRK 530
++ ++ +RK ++K I++ L D + + GD + Q + +++
Sbjct: 479 RENTTSISAF-FQRKSLEK--QEIQNSLCPGDQSTSASGEHACGDTAAQKTTAISTFLQR 535
Query: 531 YLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTME 590
+ N S +DE+ + + E I SL+ S L +++N
Sbjct: 536 ESLEKQEIQNVSLDDEDQ---SVCAPEENTCREKPAGISTSLQMKS--LEKHQIQNSLCV 590
Query: 591 NKKSIKNECLSPVSSKSKDLTNENLGHTFE 620
+S++ +P ++ D + + F+
Sbjct: 591 GDQSVRAPGENPPREQTSDESPAGISSFFQ 620
Score = 73 (30.8 bits), Expect = 2.8e-113, Sum P(3) = 2.8e-113
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 953 ICDKCSQPIDINELQEHQDYHFAL 976
+C++C + + E EH DYHFAL
Sbjct: 685 VCERCGMKVLVWEFPEHADYHFAL 708
Score = 45 (20.9 bits), Expect = 2.8e-113, Sum P(3) = 2.8e-113
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 846 IKDTESTGPSNVISTESNEVIDQTKIRDVSS-SDHSQMTSATKADFIKESGDPNNEMCK 903
I+++ TG N+ + N DQT R S S Q A + + + + ++C+
Sbjct: 629 IQNSPCTGDPNIRAPAENTSRDQTSERSTSGMSGCFQQAVAPAGERVCSPAEEDLQVCE 687
>FB|FBgn0037141 [details] [associations]
symbol:DNApol-eta "DNApol-eta" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0000724 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HSSP:P96022 InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AY058771
EMBL:AB049433 EMBL:AB036766 IntAct:Q9GNC0 STRING:Q9GNC0
FlyBase:FBgn0037141 InParanoid:Q9GNC0 OrthoDB:EOG4XPNX1
Uniprot:Q9GNC0
Length = 885
Score = 994 (355.0 bits), Expect = 4.0e-110, Sum P(3) = 4.0e-110
Identities = 235/611 (38%), Positives = 344/611 (56%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++ L+DMDCF+CQVE K +P +PLAVVQYN W+GGGIIAVNY AR KGVTRHMRGD
Sbjct: 16 RVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRGD 75
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
EAK CPEI LC+VP++R KAD SKYR+AG+EV VL F+ ++ERAS+DEAY+D+T+ V
Sbjct: 76 EAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETV 135
Query: 124 HERMKSI--GHIAAS--QLSNTFVVGF---GPDNNDEDARKAGVM---EWLGQVYSDTDT 173
+ RM+ + G A +L NTF VG+ G N R A E Y D
Sbjct: 136 NHRMQQMQSGAFALQPQELVNTFAVGYPSIGDYVNKITNRFANPYMDDERYQMSYDQNDL 195
Query: 174 SLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSIL 233
+ + D + L I + E+RAAV +T + CSAGIAHNK+LAKL G++KP KQ+IL
Sbjct: 196 PAVRQS-DIR-LLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTIL 253
Query: 234 PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWL 293
P + + L+ +L + K++ LGGK G+ V ETL M ++ KFS LQ F+EK +WL
Sbjct: 254 PLTETASLFDSLPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWL 313
Query: 294 YYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTL 353
+ I+RGID E V R SKSIGCCK+FPG+ + + + HW+ EL+ E+ +RLE D
Sbjct: 314 FNISRGIDLEAVTPRFYSKSIGCCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIE 373
Query: 354 NKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVIN---KTNSAPPI-SD 409
N RRA+ + V + Q+ DG+ + SRS AL Y + IV +S+ +I KT P S
Sbjct: 374 NNRRAKHMVVQYVQDIDGEEVASSRSTALRDYDQESIVRLSLDLIKANTKTFLRPGSESA 433
Query: 410 LTPPLLFLGLSASKFSPLGSHPS-IQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKT 468
L + FLG+S KF + S + +Q+ F Q + S P Q + +K+ K
Sbjct: 434 LNNAIKFLGISVGKFETVSSGQNKLQEMFANQAAKKRRVSGDE--PGQLPKVEMEKKQKQ 491
Query: 469 LLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENV 528
F ++ F L +++ ++K D +AN G ++ +
Sbjct: 492 TDEFKMKSFFANYLQGAKKE---------DAKADGISANPLAAAAGAPNKNFVEEYKHKL 542
Query: 529 RKYLRTHSKDSNASD-EDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENL 587
+RT ++ E +ESF + + +++ + E +V ++ E+++ +
Sbjct: 543 HAAVRTEGTVLTSTPAEFKESFFSQYLKQQKKTGQQGSVTSREDSLDVQELA--EELDAI 600
Query: 588 TMENKKSIKNE 598
+N K + +
Sbjct: 601 EADNSKDFEED 611
Score = 69 (29.3 bits), Expect = 4.0e-110, Sum P(3) = 4.0e-110
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 949 PTKIICDKCSQ--PIDINELQEHQDYHFA 975
PT I CD+C P ++ LQ H+D+HFA
Sbjct: 704 PT-IKCDQCGANIPDEVKSLQTHRDHHFA 731
Score = 59 (25.8 bits), Expect = 4.0e-110, Sum P(3) = 4.0e-110
Identities = 30/144 (20%), Positives = 63/144 (43%)
Query: 762 SFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIE- 820
SFF YL+++K+ + S + ++++L + + EE+ +IE ++ E
Sbjct: 563 SFFSQYLKQQKKTGQQGSVTSREDSL-----------DVQELAEEL-DAIEADNSKDFEE 610
Query: 821 -TNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDH 879
T T + D H+++ A +D P+ + + N++ +T I + ++
Sbjct: 611 DTEEETELTSDTHMSKPEGQSSDAGQEQD-----PNTLNDSTGNDLYVETGIVPPTLTED 665
Query: 880 SQMTSATKADFIK-ESGDPNNEMC 902
S +K F + ES N + C
Sbjct: 666 ELKPSTSKRKFDEIESSVSNYKEC 689
Score = 56 (24.8 bits), Expect = 9.2e-109, Sum P(3) = 9.2e-109
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 947 ADPTKIICDKCSQPIDINELQEHQDYHFA 975
+DP C +C I ++ EH DYH A
Sbjct: 798 SDPQMNQCPECKAFIKCVDMPEHLDYHVA 826
>RGD|1309893 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta" species:10116
"Rattus norvegicus" [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA;ISO] [GO:0006301 "postreplication repair"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010225 "response to UV-C" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1309893 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
EMBL:CH473987 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML OrthoDB:EOG4RBQJ8 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 IPI:IPI00194322
RefSeq:NP_001101674.1 UniGene:Rn.53711 Ensembl:ENSRNOT00000026049
GeneID:316235 KEGG:rno:316235 UCSC:RGD:1309893 NextBio:670614
Uniprot:D4ADZ0
Length = 689
Score = 991 (353.9 bits), Expect = 3.5e-109, Sum P(3) = 3.5e-109
Identities = 209/429 (48%), Positives = 284/429 (66%)
Query: 5 IIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDE 64
++AL+DMDCF+ QVE + NP L KP AVVQY +WKGGGIIAV+YEAR GVTR+M D+
Sbjct: 8 VVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWADD 67
Query: 65 AKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVH 124
AK+ CP++ L +V RGKA+++KYR A EV+ ++S F+ ++ERASIDEAYIDLT+ V
Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSHFA-VIERASIDEAYIDLTNAVQ 126
Query: 125 ERMKSI-GH-IAASQLSNTFVVGF--GPDNND----EDARKAGVMEWLGQVYSDTDTSLM 176
ER++ + G ++A L +T++ G GP D ED RK G+++WLG + D TS
Sbjct: 127 ERLEKLQGQPVSADLLPSTYIEGLPRGPAVEDTVEKEDIRKQGLLQWLGSLEKDDPTS-- 184
Query: 177 ENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQS 236
D + L + VIVEE+RAA+ KT F CSAGI+HNKVLAKL CGL+KP +Q+++
Sbjct: 185 ---PDLR-LTVGAVIVEEMRAAIERKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG 240
Query: 237 SVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYI 296
SV L++ + I+K+R LGGKLG V++ L M +L +F+ QLQSHF EK SWLY +
Sbjct: 241 SVPQLFSQMPIRKIRSLGGKLGASVIDVLGVEYMGDLTQFTEAQLQSHFGEKNGSWLYAM 300
Query: 297 ARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKR 356
RGI+HEPV R + K+IGC K FPGKT LATR+ V W+ +LA E+ ERL D T N R
Sbjct: 301 CRGIEHEPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLALELEERLTKDRTDNGR 360
Query: 357 RAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLF 416
A L VS E D +++S R AL Y + + + I N++ ++ +PPL
Sbjct: 361 VATQLVVSIRVEGDKRLSSLRRCCALTRYDAHKMSQDAFATIRNCNTSGVQTEWSPPLTM 420
Query: 417 LGLSASKFS 425
L L A+KFS
Sbjct: 421 LFLCATKFS 429
Score = 78 (32.5 bits), Expect = 3.5e-109, Sum P(3) = 3.5e-109
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 951 KIICDKCSQPIDINELQEHQDYHFAL 976
+++C+KC + + ++ EH DYHFAL
Sbjct: 609 QVLCEKCDSLVPVWDMPEHLDYHFAL 634
Score = 44 (20.5 bits), Expect = 3.5e-109, Sum P(3) = 3.5e-109
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 737 PTTSQGNNPDTHEP----PNSSNKRGKSYSFFENYLRRKKERE 775
P S G T EP P S SFF+ +R++ RE
Sbjct: 454 PAASSGTR--TQEPGPAAPTSKEAATSLESFFQKAAKRQRMRE 494
Score = 40 (19.1 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 391 VEVSMQVINKTNSAPPISDLTP-----PLLFLGLSASKFSPLGSHPSIQQFFKPQDH 442
+E+ + S P ++P P L S + P G +++ FFKP H
Sbjct: 634 LELQKSFLQPCTSKPQAVPVSPQGKRNPKSPLASSNKRLRPHGMQ-TLESFFKPLTH 689
>UNIPROTKB|E2RC81 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0003887
GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:AAEX03008345 RefSeq:XP_532150.2
Ensembl:ENSCAFT00000003028 GeneID:474915 KEGG:cfa:474915
NextBio:20850851 Uniprot:E2RC81
Length = 712
Score = 987 (352.5 bits), Expect = 1.2e-108, Sum P(3) = 1.2e-108
Identities = 218/465 (46%), Positives = 292/465 (62%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF+ QVE + NP L KP AVVQY +WKGGGI+AV+YEAR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIVAVSYEARAFGVTRSMWAD 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L +V RGKA+++KYR A EV+ +LS F+ ++ERASIDEAYIDLT V
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREASVEVMGILSRFA-VIERASIDEAYIDLTSAV 125
Query: 124 HERMKSI-GH-IAASQLSNTFVVGF--GP---DNND--EDARKAGVMEWLGQVYSDTDTS 174
ER++++ G I+A L T++ G GP + D E+ RK G+ +WL + D +TS
Sbjct: 126 QERLQNLQGQPISADLLPTTYIEGLPQGPTTAEGTDQKEETRKQGLFQWLDSLQIDNNTS 185
Query: 175 LMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP 234
D Q L + VIVEE+RAA+ +T F CSAGI+HNKVLAKL CGL+KP +Q+++
Sbjct: 186 -----PDLQ-LTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVS 239
Query: 235 QSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLY 294
SV L++ + I K+R LGGKLG V+E L M EL +F+ QLQSHF EK SWLY
Sbjct: 240 HGSVPQLFSQMPISKIRSLGGKLGASVIEILGVEYMGELTQFTESQLQSHFGEKNGSWLY 299
Query: 295 YIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLN 354
+ RGI+H+PV R + K+IGC K FPGKT L TR+ V W+ +LA E+ ERL D N
Sbjct: 300 AMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALTTREQVQWWLLQLAQELEERLTKDRNDN 359
Query: 355 KRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPL 414
R A L VS + D +++S R AL Y + + VI N++ +D +PPL
Sbjct: 360 DRVATQLAVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFAVIKNCNTSGIKTDWSPPL 419
Query: 415 LFLGLSASKFS-PLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQST 458
L L A+KFS P S + F D P +T+ S E T
Sbjct: 420 TMLFLCATKFSAPAPSSCTDITTFLSSD-PSSVTNVPVSSSEAKT 463
Score = 82 (33.9 bits), Expect = 1.2e-108, Sum P(3) = 1.2e-108
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 934 IADSSTVDSAINIADPTKIICDKCSQPIDINELQEHQDYHFAL 976
+A ST + A+ ++ C+KC + + E+ EH DYHFAL
Sbjct: 616 VAQKSTTTPSPMAAED-QVPCEKCGSLVPVWEMPEHTDYHFAL 657
Score = 39 (18.8 bits), Expect = 1.2e-108, Sum P(3) = 1.2e-108
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 429 SHPSIQQFFKPQD---HPEPMTS----EHSSLPEQST------NHDSKKRDKTLLNFNQQ 475
++PSI FF PQ+ PE +T+ E+ + +Q+ + K T L+ Q
Sbjct: 545 NNPSI--FFPPQNPQSSPEELTNGFPTEYPNYTDQNLVCQAVPKLGTSKTTPTELDLTQN 602
Query: 476 TPFQLA 481
+P +LA
Sbjct: 603 SPSRLA 608
>UNIPROTKB|F1RRJ6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509 CTD:5429
OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:CR974460 RefSeq:XP_003356678.1
UniGene:Ssc.83954 Ensembl:ENSSSCT00000001879 GeneID:100153104
KEGG:ssc:100153104 Uniprot:F1RRJ6
Length = 698
Score = 970 (346.5 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 214/486 (44%), Positives = 299/486 (61%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF+ QVE + NP L KP AVVQY +WKGGGI++V+YEAR GVT+ M D
Sbjct: 7 RVVALLDMDCFFVQVEQRQNPHLKNKPCAVVQYKSWKGGGIVSVSYEARAFGVTKSMWAD 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L +V RGKA+++KYR A EV+ V+S F+ ++ERASIDEA++DLT V
Sbjct: 67 DAKKLCPDLLLAQVLESRGKANLTKYREASAEVMEVMSRFA-MIERASIDEAFVDLTSAV 125
Query: 124 HERMKSI-GH-IAASQLSNTFVVGFGPDN--------NDEDARKAGVMEWLGQVYSDTDT 173
ER++ + G ++A L T++ GF P E+ RK G+++WL + SD +T
Sbjct: 126 RERLQKLQGQPVSADLLPTTYIEGF-PQGLTTAEGTVEKEEMRKQGLLQWLDSLQSD-NT 183
Query: 174 SLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSIL 233
S E +L + VIVEE+RAA+ +T CSAGI+HNKVLAKL C LHKP +Q+++
Sbjct: 184 SSPE-----LQLTVGAVIVEEMRAAIERQTGLQCSAGISHNKVLAKLACALHKPNRQTLV 238
Query: 234 PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWL 293
SV +++ + I KVRHLGGKLG ++E L M EL +F+ QLQSHF EK SWL
Sbjct: 239 SLGSVPQVFSQMPISKVRHLGGKLGASIIEILGIEYMGELTQFTESQLQSHFGEKNGSWL 298
Query: 294 YYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTL 353
Y + RGI+HEPV R V+K++GC K FPGKT L TR+ V W+ +LA E+ ERL D
Sbjct: 299 YAMCRGIEHEPVRPRQVTKTLGCGKNFPGKTALVTREQVQWWLLQLAQELEERLTKDRND 358
Query: 354 NKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPP 413
N R A L VS D +++S R AL Y + + + I N++ ++ +PP
Sbjct: 359 NDRVATQLAVSIRVLGDKRLSSLRRCCALTHYDAHKMSQDAFAAIRNYNTSGIQTEWSPP 418
Query: 414 LLFLGLSASKFSPLGSHPSIQQFFK--PQDHPE-PMTSEHSSLPEQS-TNHDSKKRDKTL 469
L L L A+KFS + I F P P+ P+TS + E +KK +L
Sbjct: 419 LTMLFLCATKFSASSAGTDITVFLSSDPSSLPKVPVTSSEAKTQESGPVGTVTKKATNSL 478
Query: 470 LNFNQQ 475
+F Q+
Sbjct: 479 ESFFQK 484
Score = 93 (37.8 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 27/132 (20%), Positives = 58/132 (43%)
Query: 845 PIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKS 904
P + + +TG S + ++ Q ++ D S Q ++ + E D C++
Sbjct: 517 PFQTSSTTG-SEPFFKQKTLLLKQKQLNDPSVFFPPQKPQSSPKELPTEYPD-GGPACEN 574
Query: 905 TVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIICDKCSQPIDIN 964
++ S D++ ++ + + +++ S + D +++C+KC + +
Sbjct: 575 ALKLDSAQATPAE--VDLAQNSSLTSKSALEEATATLSLLAAED--QVLCEKCGSLVPVW 630
Query: 965 ELQEHQDYHFAL 976
E EH DYHFAL
Sbjct: 631 ETPEHSDYHFAL 642
>MGI|MGI:1891457 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta (RAD 30
related)" species:10090 "Mus musculus" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IDA] [GO:0006301
"postreplication repair" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1891457 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 HOGENOM:HOG000115605 HOVERGEN:HBG053633 OMA:SPPLTML
OrthoDB:EOG4RBQJ8 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AB027128 EMBL:AB037184 EMBL:AK036296 IPI:IPI00122040
RefSeq:NP_109640.1 UniGene:Mm.311585 ProteinModelPortal:Q9JJN0
SMR:Q9JJN0 IntAct:Q9JJN0 STRING:Q9JJN0 PhosphoSite:Q9JJN0
PRIDE:Q9JJN0 Ensembl:ENSMUST00000024749 GeneID:80905 KEGG:mmu:80905
UCSC:uc008crx.1 GeneTree:ENSGT00530000062942 InParanoid:Q9JJN0
NextBio:350254 Bgee:Q9JJN0 CleanEx:MM_POLH Genevestigator:Q9JJN0
GermOnline:ENSMUSG00000023953 Uniprot:Q9JJN0
Length = 694
Score = 975 (348.3 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 207/431 (48%), Positives = 284/431 (65%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
+R++AL+DMDCF+ QVE + NP L KP AVVQY +WKGGGIIAV+YEAR GVTR+M
Sbjct: 6 NRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWA 65
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
D+AK+ CP++ L +V RGKA+++KYR A EV+ ++S F+ ++ERASIDEAYIDLT
Sbjct: 66 DDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSYFA-VIERASIDEAYIDLTSA 124
Query: 123 VHERMKSI-GH-IAASQLSNTFVVGF--GPDNND----EDARKAGVMEWLGQVYSDTDTS 174
V ER++ + G I+A L +T++ G GP + E RK G+++WL + SD TS
Sbjct: 125 VQERLQKLQGQPISADLLPSTYIEGLPRGPTVEETVQKEAIRKQGLLQWLDSLQSDDPTS 184
Query: 175 LMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP 234
D + L + +IVEE+RAA+ SKT F CSAGI+HNKVLAKL CGL+KP +Q+++
Sbjct: 185 -----PDLR-LTVGAMIVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVS 238
Query: 235 QSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLY 294
SV L++ + I+K+R LGGKLG V+E L M +L +F+ QLQSHF EK SWLY
Sbjct: 239 HGSVPQLFSQMPIRKIRSLGGKLGASVIEVLGIEYMGDLTQFTESQLQSHFGEKNGSWLY 298
Query: 295 YIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLN 354
+ RGI+H+PV R + K+IGC K FPGKT LATR+ V W+ +LA E+ ERL D N
Sbjct: 299 AMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLALELEERLTKDRNDN 358
Query: 355 KRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPL 414
R A L VS + D +++S R AL Y + + + I N++ ++ +PPL
Sbjct: 359 DRVATQLVVSIRFQGDRRLSSLRRCCALPRYDAHKMSQDAFAAIRNCNTSGIQTEWSPPL 418
Query: 415 LFLGLSASKFS 425
L L A+KFS
Sbjct: 419 TMLFLCATKFS 429
Score = 87 (35.7 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 913 INKGNGNADVSPMDTVDI---INTIADSSTV-DS-AINIADPTK------IICDKCSQPI 961
++ G + V P+ + + +N DS V DS A N + T+ ++C+KC +
Sbjct: 564 VDSGPDDGAVKPVSSKAVSTEMNVAGDSPNVLDSPAYNSQEVTQRATEDQVLCEKCDSLV 623
Query: 962 DINELQEHQDYHFAL 976
+ ++ EH DYHFAL
Sbjct: 624 PVWDMPEHTDYHFAL 638
Score = 41 (19.5 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 855 SNVISTESNEVIDQTKIRDVSSSDHSQMTS-ATKADFIKESGD 896
S +STE N D + D + + ++T AT+ + E D
Sbjct: 578 SKAVSTEMNVAGDSPNVLDSPAYNSQEVTQRATEDQVLCEKCD 620
Score = 40 (19.1 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 420 SASKFSPLGSHPSIQQFFKPQDH 442
S+ + P G +++ FFKP H
Sbjct: 673 SSKRLRPHGMQ-TLESFFKPLTH 694
>UNIPROTKB|Q9Y253 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IDA]
[GO:0010225 "response to UV-C" evidence=IDA] [GO:0006282
"regulation of DNA repair" evidence=TAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_216
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0006282
GO:GO:0003887 GO:GO:0006290 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CleanEx:HS_POLH KO:K03509 EMBL:AL353602
EMBL:AB024313 EMBL:AF158185 EMBL:AB038008 EMBL:AY388614
EMBL:AL355802 EMBL:BC015742 IPI:IPI00008011 IPI:IPI00552037
RefSeq:NP_006493.1 UniGene:Hs.655467 PDB:2I5O PDB:2LSK PDB:3MR2
PDB:3MR3 PDB:3MR5 PDB:3MR6 PDB:3SI8 PDB:3TQ1 PDB:4DL2 PDB:4DL3
PDB:4DL4 PDB:4DL5 PDB:4DL6 PDB:4DL7 PDB:4ECQ PDB:4ECR PDB:4ECS
PDB:4ECT PDB:4ECU PDB:4ECV PDB:4ECW PDB:4ECX PDB:4ECY PDB:4ECZ
PDB:4ED0 PDB:4ED1 PDB:4ED2 PDB:4ED3 PDB:4ED6 PDB:4ED7 PDB:4ED8
PDB:4EEY PDBsum:2I5O PDBsum:2LSK PDBsum:3MR2 PDBsum:3MR3
PDBsum:3MR5 PDBsum:3MR6 PDBsum:3SI8 PDBsum:3TQ1 PDBsum:4DL2
PDBsum:4DL3 PDBsum:4DL4 PDBsum:4DL5 PDBsum:4DL6 PDBsum:4DL7
PDBsum:4ECQ PDBsum:4ECR PDBsum:4ECS PDBsum:4ECT PDBsum:4ECU
PDBsum:4ECV PDBsum:4ECW PDBsum:4ECX PDBsum:4ECY PDBsum:4ECZ
PDBsum:4ED0 PDBsum:4ED1 PDBsum:4ED2 PDBsum:4ED3 PDBsum:4ED6
PDBsum:4ED7 PDBsum:4ED8 PDBsum:4EEY ProteinModelPortal:Q9Y253
SMR:Q9Y253 IntAct:Q9Y253 MINT:MINT-2789553 STRING:Q9Y253
PhosphoSite:Q9Y253 DMDM:59798441 PRIDE:Q9Y253
Ensembl:ENST00000372226 Ensembl:ENST00000372236 GeneID:5429
KEGG:hsa:5429 UCSC:uc003ovq.4 CTD:5429 GeneCards:GC06P043543
HGNC:HGNC:9181 HPA:HPA006721 HPA:HPA026762 MIM:278750 MIM:603968
neXtProt:NX_Q9Y253 Orphanet:90342 PharmGKB:PA279
HOGENOM:HOG000115605 HOVERGEN:HBG053633 InParanoid:Q9Y253
OMA:SPPLTML OrthoDB:EOG4RBQJ8 PhylomeDB:Q9Y253 SABIO-RK:Q9Y253
BindingDB:Q9Y253 ChEMBL:CHEMBL5542 EvolutionaryTrace:Q9Y253
GenomeRNAi:5429 NextBio:21005 ArrayExpress:Q9Y253 Bgee:Q9Y253
Genevestigator:Q9Y253 GermOnline:ENSG00000170734 InterPro:IPR017061
PIRSF:PIRSF036603 Uniprot:Q9Y253
Length = 713
Score = 981 (350.4 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 218/470 (46%), Positives = 297/470 (63%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF+ QVE + NP L KP AVVQY +WKGGGIIAV+YEAR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L +V RGKA+++KYR A EV+ ++S F+ ++ERASIDEAY+DLT V
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAV 125
Query: 124 HERMKSI-GH-IAASQLSNTFVVGF--GPDNNDEDA-----RKAGVMEWLGQVYSDTDTS 174
ER++ + G I+A L +T++ G GP +E RK G+ +WL + D TS
Sbjct: 126 QERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTS 185
Query: 175 LMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP 234
D Q L + VIVEE+RAA+ +T F CSAGI+HNKVLAKL CGL+KP +Q+++
Sbjct: 186 -----PDLQ-LTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVS 239
Query: 235 QSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLY 294
SV L++ + I+K+R LGGKLG V+E L M EL +F+ QLQSHF EK SWLY
Sbjct: 240 HGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLY 299
Query: 295 YIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLN 354
+ RGI+H+PV R + K+IGC K FPGKT LATR+ V W+ +LA E+ ERL D N
Sbjct: 300 AMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDN 359
Query: 355 KRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPL 414
R A L VS + D +++S R AL Y + + VI N++ ++ +PPL
Sbjct: 360 DRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPL 419
Query: 415 LFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQS-TNHDSK 463
L L A+KFS S PS D ++S+ SSLP+ T+ ++K
Sbjct: 420 TMLFLCATKFS--ASAPS-----SSTDITSFLSSDPSSLPKVPVTSSEAK 462
Score = 78 (32.5 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 934 IADSSTVDSAINIADPTKIICDKCSQPIDINELQEHQDYHFAL 976
+ +T + ++ +A ++ C+KC + + ++ EH DYHFAL
Sbjct: 616 VTQKATPNPSL-LAAEDQVPCEKCGSLVPVWDMPEHMDYHFAL 657
>UNIPROTKB|F1MZ79 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:DAAA02055099 IPI:IPI00691559 Ensembl:ENSBTAT00000007900
Uniprot:F1MZ79
Length = 710
Score = 957 (341.9 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 212/487 (43%), Positives = 300/487 (61%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF QVE + NP L KP AVVQY +WKGGGI+AV+YEAR GVTR+M D
Sbjct: 7 RVVALVDMDCFV-QVEQRQNPHLRNKPCAVVQYTSWKGGGIVAVSYEARAFGVTRNMWAD 65
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L ++ + GKA+++KYR+A EV+ V+S F+ ++ER SIDEAY+DLT V
Sbjct: 66 DAKKLCPDLLLAQIRELHGKANLTKYRDASMEVMEVMSRFA-VMERGSIDEAYLDLTSAV 124
Query: 124 HERMKSIGH--IAASQLSNTFVVGF--GPDNND-----EDARKAGVMEWLGQVYSDTDTS 174
ER++ + + I+A L T + GF GP + E+ RK G+++WL + +++ +S
Sbjct: 125 QERLQKLQNQPISADLLPTTCIEGFPQGPTTTEGTVEKEERRKQGLLQWLDSLQTESTSS 184
Query: 175 LMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP 234
D Q L + VIVEE+RAA+ +T F CSAGI+HNKVLAKL CGL+KP +Q+++
Sbjct: 185 -----PDLQ-LTMGAVIVEEMRAAIERQTGFQCSAGISHNKVLAKLACGLNKPNRQTLVS 238
Query: 235 QSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLY 294
SV L+ + I K+R+LGGKLG V+E L M EL +FS QLQSHF E+ SWLY
Sbjct: 239 HGSVPQLFNQVPISKIRNLGGKLGASVIEILGVEYMGELTQFSEPQLQSHFGERNGSWLY 298
Query: 295 YIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLN 354
+ RGI+H+PV R ++K++GC K FPGKT L+TR V W+ +LA E+ ERL D N
Sbjct: 299 AMCRGIEHDPVKPRPITKTLGCSKNFPGKTALSTRDQVQWWLLQLAQELEERLIKDRNAN 358
Query: 355 KRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPL 414
R A L VS + D +++S R AL Y + + I N++ ++ PPL
Sbjct: 359 DRVATQLVVSMRIQGDRRLSSLRRCCALTHYDAHKMSHDAFATIRNCNTSGTQTEWAPPL 418
Query: 415 LFLGLSASKF--SPLGSHPSIQQFFK--PQDHPE-PMTSEHSSLPEQSTNHDSKKRDKTL 469
+ L L A+KF S P I F P P+ P+TS + + K+ T
Sbjct: 419 IMLFLCATKFCSSTPSPGPDITTFLSSDPSSLPKVPITSSEAKTQGSGPAVTTPKKATTS 478
Query: 470 L-NFNQQ 475
L +F Q+
Sbjct: 479 LESFFQK 485
Score = 86 (35.3 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 934 IADSSTVDSAINIADPTKIICDKCSQPIDINELQEHQDYHFAL 976
+A +T+ S+ +A ++ C+KC + + ++ EH DYHFAL
Sbjct: 613 VAQKATMTSSF-LAAEDQVPCEKCGSLVPVWDMPEHSDYHFAL 654
>UNIPROTKB|F1NAG6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AADN02011866 EMBL:AADN02011865 IPI:IPI00596429
Ensembl:ENSGALT00000016798 ArrayExpress:F1NAG6 Uniprot:F1NAG6
Length = 686
Score = 889 (318.0 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 200/428 (46%), Positives = 265/428 (61%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF+ QVE + +P L G+P AVVQYN W+GGGIIAV+YEAR GV+R M
Sbjct: 7 RVVALVDMDCFFMQVEQRFDPRLRGRPCAVVQYNQWQGGGIIAVSYEARAFGVSRGMWAT 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
EA+ CPE+ L RVP RGKAD+++YR A EV+ VLS F+ I ERASI + Y+DLT
Sbjct: 67 EARALCPELLLARVPEARGKADLTRYREASAEVMEVLSRFAAI-ERASIFKGYLDLTGSA 125
Query: 124 HERMKSIGHIAASQLSNTFVVGF----GPDNND-EDARKAGVMEWLGQVYSDTDTSLMEN 178
ER A L TFV G G D E+ R+ G+ EWL + D N
Sbjct: 126 RERXXX-----AELLPTTFVQGLPAEPGLQPADKEELRRRGLQEWLASLSFDN-----VN 175
Query: 179 TEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSV 238
D Q LA+ VIVEEIR AV T F CSAGI+HNK+LAKL CGL+KP +Q+++ SV
Sbjct: 176 CPDLQ-LAMGAVIVEEIRVAVEKATGFRCSAGISHNKMLAKLACGLNKPNRQTLVSSRSV 234
Query: 239 SMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIAR 298
L++ + + +R+LGGKLG + + L + E+ KFS +LQ+HF +KT SWLY + R
Sbjct: 235 PQLFSQMPVSSIRNLGGKLGVAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCR 294
Query: 299 GIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRA 358
GID EPV R + +SIGC K FPGKT LAT+++V HW+ +LA E+ RL D + N R A
Sbjct: 295 GIDDEPVKNRHLPQSIGCSKNFPGKTALATQKEVQHWLLQLALELESRLIKDRSQNHRVA 354
Query: 359 QLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDL-TPPLLFL 417
+ L V + D ++ SR A+ Y Q I + +I N A +PPL+ +
Sbjct: 355 KQLMVVIRMQGDTRL---SRFCAVTRYDAQKIFNDAFALIQNCNMAGAHQAAWSPPLISV 411
Query: 418 GLSASKFS 425
L+ASKFS
Sbjct: 412 HLAASKFS 419
Score = 74 (31.1 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 954 CDKCSQPIDINELQEHQDYHFAL 976
C+KC Q + EL EH DYHFA+
Sbjct: 600 CEKCGQYVLAWELPEHMDYHFAV 622
Score = 46 (21.3 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 601 SPVSSKSKDLTNENLGHTFET--LPSPILTSDRDIHTSTPCRRKGSKNVFENKT 652
SP +S + ++ G E L + + S RD ++PC+R + + + T
Sbjct: 502 SPAASSMEHPEGDSAGLASEQRELEASVKQSPRDGSPASPCKRPPCEELLSDAT 555
Score = 41 (19.5 bits), Expect = 1.0e-97, Sum P(3) = 1.0e-97
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 534 THSKDSNASD-EDEESFNDKLVSIEREVEESV 564
TH+ AS E E + L S +RE+E SV
Sbjct: 498 THAHSPAASSMEHPEGDSAGLASEQRELEASV 529
>UNIPROTKB|F1NCM3 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 EMBL:AADN02011866
EMBL:AADN02011865 IPI:IPI00818532 Ensembl:ENSGALT00000038044
ArrayExpress:F1NCM3 Uniprot:F1NCM3
Length = 657
Score = 889 (318.0 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 200/428 (46%), Positives = 265/428 (61%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF+ QVE + +P L G+P AVVQYN W+GGGIIAV+YEAR GV+R M
Sbjct: 7 RVVALVDMDCFFMQVEQRFDPRLRGRPCAVVQYNQWQGGGIIAVSYEARAFGVSRGMWAT 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
EA+ CPE+ L RVP RGKAD+++YR A EV+ VLS F+ I ERASI + Y+DLT
Sbjct: 67 EARALCPELLLARVPEARGKADLTRYREASAEVMEVLSRFAAI-ERASIFKGYLDLTGSA 125
Query: 124 HERMKSIGHIAASQLSNTFVVGF----GPDNND-EDARKAGVMEWLGQVYSDTDTSLMEN 178
ER A L TFV G G D E+ R+ G+ EWL + D N
Sbjct: 126 RERXXX-----AELLPTTFVQGLPAEPGLQPADKEELRRRGLQEWLASLSFDN-----VN 175
Query: 179 TEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSV 238
D Q LA+ VIVEEIR AV T F CSAGI+HNK+LAKL CGL+KP +Q+++ SV
Sbjct: 176 CPDLQ-LAMGAVIVEEIRVAVEKATGFRCSAGISHNKMLAKLACGLNKPNRQTLVSSRSV 234
Query: 239 SMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIAR 298
L++ + + +R+LGGKLG + + L + E+ KFS +LQ+HF +KT SWLY + R
Sbjct: 235 PQLFSQMPVSSIRNLGGKLGVAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCR 294
Query: 299 GIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRA 358
GID EPV R + +SIGC K FPGKT LAT+++V HW+ +LA E+ RL D + N R A
Sbjct: 295 GIDDEPVKNRHLPQSIGCSKNFPGKTALATQKEVQHWLLQLALELESRLIKDRSQNHRVA 354
Query: 359 QLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDL-TPPLLFL 417
+ L V + D ++ SR A+ Y Q I + +I N A +PPL+ +
Sbjct: 355 KQLMVVIRMQGDTRL---SRFCAVTRYDAQKIFNDAFALIQNCNMAGAHQAAWSPPLISV 411
Query: 418 GLSASKFS 425
L+ASKFS
Sbjct: 412 HLAASKFS 419
Score = 74 (31.1 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 954 CDKCSQPIDINELQEHQDYHFAL 976
C+KC Q + EL EH DYHFA+
Sbjct: 600 CEKCGQYVLAWELPEHMDYHFAV 622
Score = 46 (21.3 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 601 SPVSSKSKDLTNENLGHTFET--LPSPILTSDRDIHTSTPCRRKGSKNVFENKT 652
SP +S + ++ G E L + + S RD ++PC+R + + + T
Sbjct: 502 SPAASSMEHPEGDSAGLASEQRELEASVKQSPRDGSPASPCKRPPCEELLSDAT 555
Score = 41 (19.5 bits), Expect = 1.0e-97, Sum P(3) = 1.0e-97
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 534 THSKDSNASD-EDEESFNDKLVSIEREVEESV 564
TH+ AS E E + L S +RE+E SV
Sbjct: 498 THAHSPAASSMEHPEGDSAGLASEQRELEASV 529
>UNIPROTKB|B4DG64 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0006301
GO:GO:0003887 GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879
EMBL:AL353602 EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181
HOVERGEN:HBG053633 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AK294430 IPI:IPI00646080 SMR:B4DG64 STRING:B4DG64
Ensembl:ENST00000535400 Uniprot:B4DG64
Length = 651
Score = 776 (278.2 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 180/414 (43%), Positives = 252/414 (60%)
Query: 60 MRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDL 119
M D+AK+ CP++ L +V RGKA+++KYR A EV+ ++S F+ ++ERASIDEAY+DL
Sbjct: 1 MWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDL 59
Query: 120 TDVVHERMKSI-GH-IAASQLSNTFVVGF--GPDNNDEDA-----RKAGVMEWLGQVYSD 170
T V ER++ + G I+A L +T++ G GP +E RK G+ +WL + D
Sbjct: 60 TSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQID 119
Query: 171 TDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
TS D Q L + VIVEE+RAA+ +T F CSAGI+HNKVLAKL CGL+KP +Q
Sbjct: 120 NLTS-----PDLQ-LTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQ 173
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
+++ SV L++ + I+K+R LGGKLG V+E L M EL +F+ QLQSHF EK
Sbjct: 174 TLVSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNG 233
Query: 291 SWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDD 350
SWLY + RGI+H+PV R + K+IGC K FPGKT LATR+ V W+ +LA E+ ERL D
Sbjct: 234 SWLYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKD 293
Query: 351 LTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDL 410
N R A L VS + D +++S R AL Y + + VI N++ ++
Sbjct: 294 RNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEW 353
Query: 411 TPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQS-TNHDSK 463
+PPL L L A+KFS S PS D ++S+ SSLP+ T+ ++K
Sbjct: 354 SPPLTMLFLCATKFS--ASAPS-----SSTDITSFLSSDPSSLPKVPVTSSEAK 400
Score = 78 (32.5 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 934 IADSSTVDSAINIADPTKIICDKCSQPIDINELQEHQDYHFAL 976
+ +T + ++ +A ++ C+KC + + ++ EH DYHFAL
Sbjct: 554 VTQKATPNPSL-LAAEDQVPCEKCGSLVPVWDMPEHMDYHFAL 595
>TAIR|locus:2156309 [details] [associations]
symbol:POLH "Y-family DNA polymerase H" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010224 "response to UV-B" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0042732 "D-xylose metabolic process" evidence=RCA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:CP002688
GO:GO:0003684 GO:GO:0010224 GO:GO:0003887 GO:GO:0042276
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AJ416380 IPI:IPI00537089
RefSeq:NP_568638.2 UniGene:At.19023 SMR:Q8H2D5 IntAct:Q8H2D5
STRING:Q8H2D5 EnsemblPlants:AT5G44740.2 GeneID:834503
KEGG:ath:AT5G44740 TAIR:At5g44740 InParanoid:Q8H2D5 OMA:CPLRYGT
ProtClustDB:CLSN2680435 Genevestigator:Q8H2D5 Uniprot:Q8H2D5
Length = 672
Score = 777 (278.6 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 188/454 (41%), Positives = 272/454 (59%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
+R+IA +DMDCFY QVE + P L G P AVVQYN W+GGG+IAV+YEAR GV R MRG
Sbjct: 11 ARVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRG 70
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
DEAK CP+I+L +VP RGKAD++ YR+AG EV+++L++ S ERASIDE Y+DLTD
Sbjct: 71 DEAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAK-SGKCERASIDEVYLDLTDA 129
Query: 123 VHERMKSIGHIAASQLSNTFVVG---FGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENT 179
E M + + +L + V+ G + D D K V W+ + +D L
Sbjct: 130 A-ESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKL---- 184
Query: 180 EDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVS 239
L+ +IV E+R VL +T+F CSAGIAHNK+LAKL G++KP +Q+++P ++V
Sbjct: 185 -----LSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQ 239
Query: 240 MLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARG 299
L ++L IKK++ LGGKLG + L T+ +L +FS +LQ H+ T +WL+ IARG
Sbjct: 240 ELLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARG 299
Query: 300 IDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQ 359
I E V RL+ KS G K FPG L + V HW+ +L++E+ ERL DL NKR A
Sbjct: 300 ISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIAS 359
Query: 360 LLTV---SF-TQETDGKVNSCSRSIAL--ASYKLQD----IVEVSM-QVINKTNSAPPIS 408
LT+ +F ++++D S+S + K+Q+ + + ++ + + P +
Sbjct: 360 TLTLHASAFRSKDSDSHKKFPSKSCPMRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGN 419
Query: 409 DL-TPPLLFLGLSASKFSPLGSHPS-IQQFFKPQ 440
L T + L +SASK + S S I ++F+ Q
Sbjct: 420 KLETWRITGLSVSASKIVDIPSGTSSIMRYFQSQ 453
Score = 53 (23.7 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 25/103 (24%), Positives = 46/103 (44%)
Query: 806 EVTS-SIETVDNGSIETNAMTRIRDDIHLARENNTKF--LADPIKDTESTGPSNVISTES 862
E T S ++ N +T + R ++ ++E N + D K+ +T PS + E
Sbjct: 527 EATDVSTQSESNKGTQTKKIGRKMNN---SKEKNRGMPSIVDIFKNYNATPPSKQETQED 583
Query: 863 NEVIDQTKIRDVSSSDH-SQMTSATKADFIKESGDPNNEMCKS 904
+ V +K +SSS H SQ+ + + G +E+ +S
Sbjct: 584 STVSSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQS 626
Score = 49 (22.3 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 539 SNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIK-N 597
S+AS + S + + +EVEES D + +F+E + E + ++ N
Sbjct: 587 SSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQSVFDELPVEIQRELRSFLRTN 646
Query: 598 ECLSPVSSKSKDLTNENLGHTFETL 622
+ + SK D + ++ H F L
Sbjct: 647 KQFNTGKSKG-DGSTSSIAHYFPPL 670
Score = 41 (19.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 13/62 (20%), Positives = 32/62 (51%)
Query: 517 SEQIKNIAAENVRKYLRTHSKDSNASDEDEES----FNDKLVSIEREVEESVGKDIEESL 572
+++ +++ + R L + S +S + E EES + K I++ V + + +I+ L
Sbjct: 580 TQEDSTVSSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQSVFDELPVEIQREL 639
Query: 573 KN 574
++
Sbjct: 640 RS 641
Score = 40 (19.1 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 847 KDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATK 887
KD + +V+S SNE D VS+ S + TK
Sbjct: 510 KDIDLVSEKDVVSCPSNEATD------VSTQSESNKGTQTK 544
>WB|WBGene00018721 [details] [associations]
symbol:polh-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005634
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:FO080224 EMBL:AB244413 PIR:A88395
RefSeq:NP_497480.2 UniGene:Cel.10441 ProteinModelPortal:G5EFY1
SMR:G5EFY1 EnsemblMetazoa:F53A3.2 GeneID:175337
KEGG:cel:CELE_F53A3.2 CTD:175337 WormBase:F53A3.2 OMA:GVGNNKM
NextBio:887718 Uniprot:G5EFY1
Length = 584
Score = 653 (234.9 bits), Expect = 6.8e-68, Sum P(3) = 6.8e-68
Identities = 164/437 (37%), Positives = 242/437 (55%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKG--GGIIAVNYEARHKGVTRHMR 61
R+I+LIDMDCFY QVE + NPSL G+P+ VVQ++ +G GGI+AV+YEAR GV R M
Sbjct: 3 RVISLIDMDCFYAQVEQRDNPSLWGQPVIVVQHSR-QGIEGGILAVSYEARPFGVKRGMT 61
Query: 62 GDEAKQHCPEIELCRVP--SVRGKADISKYRNAGREVIAVLSEFSN--IVERASIDEAYI 117
EAK CP+I +C VP KADI KYR+A EV VL+ + + I+E+AS+DEA++
Sbjct: 62 VAEAKLKCPQISICHVPIGEYVDKADIQKYRDASAEVFRVLNNYDSQIIIEKASVDEAFL 121
Query: 118 DLTDVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLME 177
DL+ +++++ + + + + P + E L + D +E
Sbjct: 122 DLSAYTNQKLQELRENEGLEEFLQAAITYLPTTHLATGEDVKENEHLRE---DVLLEYIE 178
Query: 178 NTEDFQE---LAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP 234
N + E L IA V VE+IR + +TQF CSAG+ +NK++AKLVC HKP++Q+++P
Sbjct: 179 NARNCTENLLLLIAAVTVEQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQTLIP 238
Query: 235 QSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLY 294
V + I VR GGK+G+ + E L + M EL + + QL F + +L
Sbjct: 239 WFYVREILRLTPIGDVRGFGGKMGNRIQEMLNITLMGELLEVDISQLIETFPNQH-EYLR 297
Query: 295 YIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLN 354
+A G EPV R S SI K FPGK + + ++ W+ L E+ +RL D N
Sbjct: 298 SVAEGHCDEPVRPRKESSSIAVSKNFPGKLSIRSVLELKKWLDGLTKELAKRLATDQAEN 357
Query: 355 KRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVE---VSMQVINKTNSAP--PISD 409
KR A+ L S E DGK +++ + SY + E +M+ +NKTN+
Sbjct: 358 KRTAENLVYSLLTE-DGKPQ---KTLKITSYHPDTLFEQIWAAMKGLNKTNATKNEDSGP 413
Query: 410 LTPPLLFLGLSASKFSP 426
TPP+L + LSA++F P
Sbjct: 414 WTPPILNISLSATRFQP 430
Score = 43 (20.2 bits), Expect = 6.8e-68, Sum P(3) = 6.8e-68
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 1019 NSENFKKLKTIDQFFKPK 1036
N++ KK K+++ FFK K
Sbjct: 565 NAQKPKKPKSLESFFKKK 582
Score = 40 (19.1 bits), Expect = 6.8e-68, Sum P(3) = 6.8e-68
Identities = 21/107 (19%), Positives = 40/107 (37%)
Query: 605 SKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKN-VFENKTLKSKEELPLVK 663
+K+ NE+ G + + L++ R P + + ++E KT KS+ + +
Sbjct: 401 NKTNATKNEDSGPWTPPILNISLSATR-FQPGIPAQNRSIHEWLYEKKTRKSRRKAAIYD 459
Query: 664 RVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKP 710
D F ++ P S G + D DS + +P
Sbjct: 460 ENDGREDVIFVEPPEKLKKPNPTPKSTGTDGDFIVLGSDSDDDVVQP 506
>UNIPROTKB|I3LUT8 [details] [associations]
symbol:LOC100737500 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 GeneTree:ENSGT00530000062942
EMBL:CU928880 Ensembl:ENSSSCT00000029503 OMA:FRRSEAK Uniprot:I3LUT8
Length = 191
Score = 395 (144.1 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 76/145 (52%), Positives = 109/145 (75%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++AL+DMDCF+ QVE + NP L KP AVVQY +WKGGGI++V+YEAR GVT+ M D
Sbjct: 7 RVVALLDMDCFFVQVEQRQNPHLKNKPCAVVQYKSWKGGGIVSVSYEARAFGVTKSMWAD 66
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L +V RGKA+++KYR A EV+ V+S F+ ++ERASIDEA++DLT+ V
Sbjct: 67 DAKKLCPDLLLAQVLESRGKANLTKYREASAEVMEVMSRFA-MIERASIDEAFVDLTNAV 125
Query: 124 HERMKSI-GH-IAASQLSNTFVVGF 146
ER++ + G ++A L T++ GF
Sbjct: 126 RERLQKLQGQPVSADLLPTTYIEGF 150
>ASPGD|ASPL0000072145 [details] [associations]
symbol:AN4678 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0019985 "translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:BN001303
EMBL:AACD01000080 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 OrthoDB:EOG4M0J8V InterPro:IPR017061
PIRSF:PIRSF036603 RefSeq:XP_662282.1 ProteinModelPortal:Q5B452
STRING:Q5B452 EnsemblFungi:CADANIAT00005754 GeneID:2872476
KEGG:ani:AN4678.2 HOGENOM:HOG000173699 OMA:DDPDWDD Uniprot:Q5B452
Length = 674
Score = 287 (106.1 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 85/271 (31%), Positives = 131/271 (48%)
Query: 106 IVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDAR----KAGVM 161
+VE+AS+DE +IDL+ +V G + L + P +D A +
Sbjct: 183 LVEKASVDEVFIDLSPLV------FGVL----LQRYPEMREKPHGDDRVALLPCPPTTAL 232
Query: 162 EW-LGQVYSDTDTSLME-NTEDFQELA--IAGVIVEEIRAAVLSKTQFHCSAGIAHNKVL 217
EW D D + E + D+ ++A I IV +R AV + + CSAGIA NK++
Sbjct: 233 EWDTEDCLVDLDENETEVDDPDWDDVAMLIGAEIVRSVRTAVWNSLSYTCSAGIAKNKMM 292
Query: 218 AKLVCGLHKPQKQSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFS 277
AKL +KP KQ+++ ++ + K+R LGGKLGD+V + EL K S
Sbjct: 293 AKLGSATNKPNKQTVVRNRAIQNFLSGFKFTKIRMLGGKLGDQVTAMFGTEQISELLKVS 352
Query: 278 LKQLQSHFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQ 337
L+Q ++ + TA WLY I RG D VN R KS+ K F + + T W+
Sbjct: 353 LEQFRAKLNDDTAVWLYGIIRGEDKSEVNPRTQIKSMLSAKSF--RPSINTLDQADKWLH 410
Query: 338 ELADEVCERL-EDDLTLNKRRAQLLTVSFTQ 367
A ++ RL E+ + +KRR + + + Q
Sbjct: 411 IFAADIYGRLVEEGVLEHKRRPKTIALHHRQ 441
Score = 131 (51.2 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R+IA ID+D FY Q E + +PLAV Q+++ +IA+NY AR G+TR +
Sbjct: 43 RVIAHIDLDAFYAQCEMVRLGTPRERPLAVQQWDS-----LIAINYPARKFGITRMISAK 97
Query: 64 EAKQHCPEIELCRVPSVR-GKADISKYR 90
EAK C +I L V + R G+ YR
Sbjct: 98 EAKAKCADIVLQHVATFREGEGGKWAYR 125
Score = 77 (32.2 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 33/128 (25%), Positives = 57/128 (44%)
Query: 860 TESNEVIDQ-----TKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQ--FHSNS 912
T N+ ID + R+++SS S++ A + + + ++ S ++ F+ S
Sbjct: 497 TSKNQAIDGFLLRGDQARNMASSSSSRVHVADEVPAEHQPIEKRRKVEDSGLRRFFNKPS 556
Query: 913 INKGNGNA-DVSPM-DTVDI-INT--IADSSTVDSAINIADPTKIICDKCSQPIDINELQ 967
G G++ D M DT DI ++ + D D I C +C + I+ E
Sbjct: 557 ETDGPGHSFDKGHMADTPDINVDNAQLDDHVASDGEIEQVHSKSFRCPRCGRYINCGEED 616
Query: 968 EHQDYHFA 975
EH D+HFA
Sbjct: 617 EHNDWHFA 624
Score = 41 (19.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 538 DSNASDEDEESFNDKLVSIEREVEESVGKDIEESL 572
D N ++ D+ ++D + I E+ SV + SL
Sbjct: 244 DENETEVDDPDWDDVAMLIGAEIVRSVRTAVWNSL 278
>POMBASE|SPBC16A3.11 [details] [associations]
symbol:eso1 "sister chromatid cohesion protein/DNA
polymerase eta Eso1 fusion protein" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006473
"protein acetylation" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016407 "acetyltransferase activity"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=IMP]
[GO:0034087 "establishment of mitotic sister chromatid cohesion"
evidence=IMP] [GO:0034182 "regulation of maintenance of mitotic
sister chromatid cohesion" evidence=TAS] [GO:0043596 "nuclear
replication fork" evidence=IC] InterPro:IPR001126
InterPro:IPR015880 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00355
PomBase:SPBC16A3.11 GO:GO:0046872 GO:GO:0003684 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0043596
GO:GO:0016746 GO:GO:0034087 GO:GO:0006473 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03509 EMBL:AB039861 PIR:T39541 RefSeq:NP_596778.1
ProteinModelPortal:O42917 IntAct:O42917 STRING:O42917
EnsemblFungi:SPBC16A3.11.1 GeneID:2539666 KEGG:spo:SPBC16A3.11
OrthoDB:EOG4M0J8V NextBio:20800820 GO:GO:0034182 Uniprot:O42917
Length = 872
Score = 355 (130.0 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 111/433 (25%), Positives = 213/433 (49%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R++A ID D FY QVE H PLAV Q W+G +IAVNY AR ++RH
Sbjct: 27 RVVAHIDQDAFYAQVESVRLGLDHSVPLAVQQ---WQG--LIAVNYAARAANISRHETVT 81
Query: 64 EAKQHCPEIELCRVPSVR-GKAD---------------ISKYRNAGREVIAVLSEFSNIV 107
EAK+ CPE+ V + + G+++ + YR+ +++ ++ + + +V
Sbjct: 82 EAKKKCPELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVKILNIIKKHAPVV 141
Query: 108 ERASIDEAYIDLT-DVVHERMKSIGHIAA-SQLSNTFVVGFGPDNNDEDARKAGVMEWLG 165
++ASIDE +I+LT DV ++ ++ S+ SN + P +A V+ W
Sbjct: 142 KKASIDECFIELTSDVKRIVLEEYPYLKIPSEDSNVAL----P--------QAPVLLWPA 189
Query: 166 QVYSDTDTSLMENT-EDFQE------LAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLA 218
+ + +++ T ED++ L A IV+EIR + + ++ CSAG++ N +L+
Sbjct: 190 EFGMVIEEEVVDRTKEDYERDWDDVFLFYAAKIVKEIRDDIYLQLKYTCSAGVSFNPMLS 249
Query: 219 KLVCGLHKPQKQSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSL 278
KLV +KP KQ+IL ++++ +L I +R LGGK G+E++ L ++ ++ S+
Sbjct: 250 KLVSSRNKPNKQTILTKNAIQDYLVSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSM 309
Query: 279 KQLQSHFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQE 338
L + ++ + GID+ + ++ KS+ K F + + + +D +W Q
Sbjct: 310 DFLIDKLGQTNGPLVWNLCHGIDNTEITTQVQIKSMLSAKNFSQQK-VKSEEDAINWFQV 368
Query: 339 LADEVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVI 398
A ++ R + + + + LTV + + ++ +++ + + ++ +
Sbjct: 369 FASDLRSRFLELEGMRRPKTICLTVVSRFLRKSRSSQIPMNVDISTQFIVEATSKLLRQL 428
Query: 399 NKTNSAPPISDLT 411
+ PIS+L+
Sbjct: 429 QQEFDVYPISNLS 441
Score = 87 (35.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 39/152 (25%), Positives = 64/152 (42%)
Query: 833 LARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSAT------ 886
L R+ +F PI + S N+I + N + ++ S+D M+++
Sbjct: 424 LLRQLQQEFDVYPISNL-SISFQNIIEVDRNSRGIEGFLK--KSNDEIYMSTSVSPSIEG 480
Query: 887 KADFIKESGDPNNEM-CKSTVQFHS-NSINKGNGNADVSPMDTVDIINTIADSSTVDSAI 944
+A + E+ NN S S + +G G D++ A S +
Sbjct: 481 RAKLLNENMRENNSFELSSEKDIKSPKRLKRGKGKG------IFDMLQQTAVSKPTE--- 531
Query: 945 NIADPTKIICDKCSQPIDINELQEHQDYHFAL 976
N AD T C++C Q I ++E EH+DYH AL
Sbjct: 532 NSADET-YTCEECEQKITLSERNEHEDYHIAL 562
Score = 82 (33.9 bits), Expect = 6.2e-32, Sum P(2) = 6.2e-32
Identities = 80/392 (20%), Positives = 148/392 (37%)
Query: 547 ESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEK-VEN-LTMENKKSIKNECLSP-V 603
E+ + L +++E + ++ S +N+ +V N + +E L N + + +SP +
Sbjct: 419 EATSKLLRQLQQEFDVYPISNLSISFQNIIEVDRNSRGIEGFLKKSNDEIYMSTSVSPSI 478
Query: 604 SSKSKDLTNENL--GHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFE--NKTLKSKEEL 659
++K L NEN+ ++FE L+S++DI + +R K +F+ +T SK
Sbjct: 479 EGRAK-LLNENMRENNSFE------LSSEKDIKSPKRLKRGKGKGIFDMLQQTAVSK--- 528
Query: 660 PLVKRVDNTIP--NSFEFITYTRRQVKPE-----NISNGNNSDNKTD-DEDSP-QVITKP 710
P D T + IT + R + +IS +N D P QV K
Sbjct: 529 PTENSADETYTCEECEQKITLSERNEHEDYHIALSISRKERYNNLVPPSHDKPKQVKPKT 588
Query: 711 IGSISMRKYETTRQSHLNKPKLFADFPTTSQGN-NPD-THEPP----NSSNKRGKSYSFF 764
G + K+ N + F D + GN P+ + P NSS+ + +
Sbjct: 589 YGRKTGSKHYAPLSDETNNKRAFLDAFLGNGGNLTPNWKKQTPKAISNSSDNMTQLHLDL 648
Query: 765 ENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAM 824
N E + + +++ L H + H V + S I V+ G + ++ +
Sbjct: 649 ANSTVTCSECSMEYNSTSEEDILLHSRFHSRVLGGVTVSFQ--CSPIYRVNYG-LSSDCI 705
Query: 825 TRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTS 884
I + L + + + + S+ P I + I D
Sbjct: 706 YSINSESSLIDQRKAEEALSFVNNELSSEPIETIGVDKYTTF--LFISDKKCVGLLLAER 763
Query: 885 ATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
+ A + E NN S V + ++ KG
Sbjct: 764 ISSAYIVDELELNNNNSTSSAVYIKNENLRKG 795
Score = 48 (22.0 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 35/172 (20%), Positives = 69/172 (40%)
Query: 429 SHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERK 488
SH +Q KP+ + S+H + TN+ D L N TP + +
Sbjct: 577 SHDKPKQV-KPKTYGRKTGSKHYAPLSDETNNKRAFLDAFLGNGGNLTPNWK--KQTPKA 633
Query: 489 LIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSK---DSNASDED 545
+ + + + LD N+ V + S + + + E++ + R HS+ S +
Sbjct: 634 ISNSSDNMTQLHLDLANSTV---TCSECSMEYNSTSEEDILLHSRFHSRVLGGVTVSFQC 690
Query: 546 EESF-------NDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTME 590
+ +D + SI E + EE+L V++ L +E +E + ++
Sbjct: 691 SPIYRVNYGLSSDCIYSINSESSLIDQRKAEEALSFVNNELSSEPIETIGVD 742
>UNIPROTKB|Q9UNA4 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005654 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AY094607 EMBL:AC093462
EMBL:AF140501 EMBL:AL136670 EMBL:BC032662 EMBL:AF245438
IPI:IPI00296840 RefSeq:NP_009126.2 UniGene:Hs.438533 PDB:1T3N
PDB:1ZET PDB:2ALZ PDB:2DPI PDB:2DPJ PDB:2FLL PDB:2FLN PDB:2FLP
PDB:2KHU PDB:2KHW PDB:2KTF PDB:2L0F PDB:2L0G PDB:3EPG PDB:3EPI
PDB:3G6V PDB:3G6X PDB:3G6Y PDB:3GV5 PDB:3GV7 PDB:3GV8 PDB:3H40
PDB:3H4B PDB:3H4D PDB:3NGD PDB:3OSN PDB:3Q8P PDB:3Q8Q PDB:3Q8R
PDB:3Q8S PDB:4EBC PDB:4EBD PDB:4EBE PDB:4EYH PDB:4EYI PDB:4FS1
PDB:4FS2 PDBsum:1T3N PDBsum:1ZET PDBsum:2ALZ PDBsum:2DPI
PDBsum:2DPJ PDBsum:2FLL PDBsum:2FLN PDBsum:2FLP PDBsum:2KHU
PDBsum:2KHW PDBsum:2KTF PDBsum:2L0F PDBsum:2L0G PDBsum:3EPG
PDBsum:3EPI PDBsum:3G6V PDBsum:3G6X PDBsum:3G6Y PDBsum:3GV5
PDBsum:3GV7 PDBsum:3GV8 PDBsum:3H40 PDBsum:3H4B PDBsum:3H4D
PDBsum:3NGD PDBsum:3OSN PDBsum:3Q8P PDBsum:3Q8Q PDBsum:3Q8R
PDBsum:3Q8S PDBsum:4EBC PDBsum:4EBD PDBsum:4EBE PDBsum:4EYH
PDBsum:4EYI PDBsum:4FS1 PDBsum:4FS2 ProteinModelPortal:Q9UNA4
SMR:Q9UNA4 IntAct:Q9UNA4 MINT:MINT-1189678 STRING:Q9UNA4
PhosphoSite:Q9UNA4 DMDM:59798440 PaxDb:Q9UNA4 PRIDE:Q9UNA4
DNASU:11201 Ensembl:ENST00000579534 GeneID:11201 KEGG:hsa:11201
UCSC:uc002lfj.4 CTD:11201 GeneCards:GC18P051731 H-InvDB:HIX0014457
HGNC:HGNC:9182 HPA:HPA012000 MIM:605252 neXtProt:NX_Q9UNA4
PharmGKB:PA33502 HOGENOM:HOG000234325 HOVERGEN:HBG053634
InParanoid:Q9UNA4 KO:K03510 OMA:VFYELPE OrthoDB:EOG46T310
ChEMBL:CHEMBL5391 ChiTaRS:POLI EvolutionaryTrace:Q9UNA4
GenomeRNAi:11201 NextBio:42637 Bgee:Q9UNA4 CleanEx:HS_POLI
Genevestigator:Q9UNA4 GermOnline:ENSG00000101751 Uniprot:Q9UNA4
Length = 740
Score = 239 (89.2 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 56/144 (38%), Positives = 84/144 (58%)
Query: 2 TSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMR 61
+SR+I +D+DCFY QVE NP L KPL V Q ++ NYEAR GV + M
Sbjct: 51 SSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMN 105
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+AK+ CP++ L V G+ D+++YR +V +L EFS +VER DE ++DLT+
Sbjct: 106 VRDAKEKCPQLVL-----VNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTE 159
Query: 122 VVHERMKSIGHIAASQLSNTFVVG 145
+V +R++ + + +LS V G
Sbjct: 160 MVEKRLQQL---QSDELSAVTVSG 180
Score = 172 (65.6 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 103/450 (22%), Positives = 192/450 (42%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L++ L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 180 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGV 237
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q++L P+S ++++ IK++ +G K + +E L +++ +L+ FS K L+
Sbjct: 238 FKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTA-KCLEALGINSVRDLQTFSPKILEK 296
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
A + ++ G D+ PV +S F K C ++ + + I+EL +
Sbjct: 297 ELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSF--KKC-SSEVEAKNKIEELLASL 353
Query: 344 CERLEDDLTLNKRRAQLLTVSFTQETD-GKVN-SCS------RSIALASYKLQD-IVEVS 394
R+ D +L+ ++ E G+ + C + + +Y + +V++
Sbjct: 354 LNRVCQD-GRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDIL 412
Query: 395 MQVI-NKTNSAPPISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSL 453
M++ N N P + F L A + G I + P + +HS
Sbjct: 413 MKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGL---IDYYLMPSLSTTSRSGKHSFK 469
Query: 454 PEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVI 513
+ + D K +T +F L RIE ++ ES LD+ N + +K
Sbjct: 470 MKDTHMEDFPKDKETNRDF-------LPSGRIEST-----RTR-ESPLDTTNFSKEK--- 513
Query: 514 GDISE----QIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIE 569
DI+E + + V K L ++ S + E F K S+ + S G
Sbjct: 514 -DINEFPLCSLPEGVDQEVFKQLPVDIQEEILSGKSREKFQGK-GSVSCPLHASRGVLSF 571
Query: 570 ESLKNVSDVLFNEKVENLTMENKKSIKNEC 599
S K + D+ N + ++L+ + S + C
Sbjct: 572 FSKKQMQDIPINPR-DHLSSSKQVSSVSPC 600
>RGD|1305212 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10116
"Rattus norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1305212 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:CH473971
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201 KO:K03510
OrthoDB:EOG46T310 IPI:IPI00870858 RefSeq:NP_001099607.1
UniGene:Rn.136855 Ensembl:ENSRNOT00000016189 GeneID:291526
KEGG:rno:291526 NextBio:632673 Uniprot:D4A8I8
Length = 732
Score = 237 (88.5 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 53/129 (41%), Positives = 77/129 (59%)
Query: 2 TSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMR 61
+SR+I +D+DCFY QVE NP L KPL V Q ++ NYEAR GV + M
Sbjct: 46 SSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMN 100
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+AK+ CP++ L V G+ D+S+YR +V +L EFS VER DE ++DLT+
Sbjct: 101 VRDAKEKCPQLVL-----VNGE-DLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTE 154
Query: 122 VVHERMKSI 130
+V +R++ +
Sbjct: 155 MVEKRLQQL 163
Score = 173 (66.0 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 59/227 (25%), Positives = 109/227 (48%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L +T LA+ I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 175 GHVYNNQSVNLHSSTH--VRLAVGSQIAAEMREAMHNQLGLTGCAGVAPNKLLAKLVSGV 232
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q++L P+S ++++ IK++ +G K + E L +++ +L+ F +K L+
Sbjct: 233 FKPNQQTVLLPESCQHLIHSLNHIKEMPGIGYKTAKRL-EVLGINSVHDLQTFPIKTLEK 291
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
A + ++ G D PV +S F K C ++ + I+EL +
Sbjct: 292 ELGISVAQRIRKLSFGEDKSPVTPSGPPQSFSEEDTF--KKC-SSEVEAKTKIEELLSSL 348
Query: 344 CERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDI 390
R+ D R+ + + + +D N SR + S+ +Q +
Sbjct: 349 LNRVCHD----GRKPHTIRLVIRRYSDKHCNRESRQCPIPSHVIQKL 391
>UNIPROTKB|F1PDA5 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:AAEX03000145 Ensembl:ENSCAFT00000000242
Uniprot:F1PDA5
Length = 702
Score = 241 (89.9 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 52/128 (40%), Positives = 78/128 (60%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
+R+I +D+DCFY QVE NP L GKPL V Q ++ NYEAR GV + M
Sbjct: 13 ARVIVHVDLDCFYAQVEMISNPELKGKPLGVQQKYL-----VVTCNYEARKLGVKKLMNV 67
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
+AK+ CP++ L V G+ D+++YR +V +L EFS +VER DE ++DLT++
Sbjct: 68 RDAKEKCPQLVL-----VNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEM 121
Query: 123 VHERMKSI 130
V +R++ +
Sbjct: 122 VEKRLQQL 129
Score = 162 (62.1 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 59/215 (27%), Positives = 104/215 (48%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L + L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 141 GHVYNNQYINLHDILHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGV 198
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q++L P+SS ++ + +K++ +G K + E L S++ +L+ FS K L+
Sbjct: 199 FKPNQQTVLLPESSQVLIQSLNHVKEMPGIGYKTAKRL-EALGISSVYDLQTFSSKILEK 257
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
A + ++ G D+ PV +S F K C ++ +V + I+EL +
Sbjct: 258 ELGISVAQRIQKLSFGEDNSPVTPSGPPQSFSEEDSF--KKC-SSEVEVKNKIEELLASL 314
Query: 344 CERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSR 378
R+ D +L+ ++ E N CSR
Sbjct: 315 LNRVCQD-GRKPHTIRLIIRRYSSE-----NHCSR 343
Score = 47 (21.6 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 724 QSHLNKPKLFADF----PTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNS 779
+ HL+ K + P TS G N + PP+S K+YS +Y+ + + ER++
Sbjct: 546 KDHLSNSKQISSVSSCEPGTS-GLNSSSSSPPSSQ----KNYS---HYIDSRLQDERMSQ 597
Query: 780 KSCKDETLTHGQVHPSV 796
+ + +P+V
Sbjct: 598 GPKESQGFHFSNTNPAV 614
Score = 41 (19.5 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 23/97 (23%), Positives = 36/97 (37%)
Query: 476 TPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTH 535
TP +R ++ SH+E N D L G I A + +
Sbjct: 415 TPSLSTTSRSGKRSFKMKDSHMEDFPKDKETNWDFLPSGRIESTRTGEAPRDTADF---- 470
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESL 572
SK+ D DE I++EV + + DI+E +
Sbjct: 471 SKEK---DSDEFPLRSLPEGIDQEVFKELPVDIQEEI 504
>UNIPROTKB|G5EH81 [details] [associations]
symbol:MGCH7_ch7g688 "Sister chromatid cohesion protein
Eso1" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0003684 GO:GO:0006281 EMBL:CM000230 EMBL:CM001237
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 RefSeq:XP_003720794.1
EnsemblFungi:MGG_02924T0 GeneID:2682477 KEGG:mgr:MGG_02924
Uniprot:G5EH81
Length = 668
Score = 346 (126.9 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 115/400 (28%), Positives = 191/400 (47%)
Query: 4 RIIALIDMDCFYCQVEC-KLNPSLHGKPLAVVQYNTWKGGGIIAVNYE-ARHKGVTRHMR 61
R+I+ ID+D FY Q E +L +PLAV Q+ A + +RH + ++
Sbjct: 48 RVISHIDLDAFYAQCEMVRLGVD-EDRPLAVQQWQGLIAVNYPARKFGISRHCAIDDALK 106
Query: 62 -GDEAK-QHCPEI-ELCRVPSVRG---------KADISKYRNAGREVIAVLSE----FSN 105
E + QH E + RG K + YR R ++A++ E
Sbjct: 107 LCPELQVQHVATWREGDNTWAYRGDAAANIATDKVSLDPYRLQSRTILALIKECLPPHQC 166
Query: 106 IVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDAR----KAGVM 161
VE+ASIDE +IDL+ VH ++ I +L++ P D AR +
Sbjct: 167 KVEKASIDEVFIDLSANVHSKL--IERFP--ELASP------PPGADAQARLPLPPVSAL 216
Query: 162 EWLGQVYSDTDTSLMENTE-DFQELA--IAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLA 218
+W + D + E + D+ ++A IA I +IR + ++ ++ CSAG+A NK+L+
Sbjct: 217 DWQADALIELDETETETDDPDWDDIALLIASEITRDIRQTIFTRLKYTCSAGVAGNKLLS 276
Query: 219 KLVCGLHKPQKQSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSL 278
KL KP +Q+++ +V ++ K+R+LGGKLGD+VV ++ +L + L
Sbjct: 277 KLGSAHKKPNQQTVIRGRAVRKFLSDFKFTKIRNLGGKLGDQVVAAFGTESVSDLLEVPL 336
Query: 279 KQLQSHF-EEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQ 337
QL+ EE TA W+Y RGID+ VN+R KS+ K F + + + + W++
Sbjct: 337 DQLKLRLGEESTALWVYNTIRGIDNSEVNSRTQIKSMLSAKSF--RPSIHSVDQANKWLR 394
Query: 338 ELADEVCERL-EDDLTLNKRRAQLLTVSFTQETDGKVNSC 376
+ ++ RL E+ + NKRR + + + K SC
Sbjct: 395 IFSADIFSRLVEEGVLENKRRPKTMNLHHRHNGQSKARSC 434
Score = 329 (120.9 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 111/406 (27%), Positives = 190/406 (46%)
Query: 83 KADISKYRNAGREVIAVLSE----FSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQL 138
K + YR R ++A++ E VE+ASIDE +IDL+ VH ++ I +L
Sbjct: 140 KVSLDPYRLQSRTILALIKECLPPHQCKVEKASIDEVFIDLSANVHSKL--IERFP--EL 195
Query: 139 SNTFVVGFGPDNNDEDAR----KAGVMEWLGQVYSDTDTSLMENTE-DFQELA--IAGVI 191
++ P D AR ++W + D + E + D+ ++A IA I
Sbjct: 196 ASP------PPGADAQARLPLPPVSALDWQADALIELDETETETDDPDWDDIALLIASEI 249
Query: 192 VEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKVR 251
+IR + ++ ++ CSAG+A NK+L+KL KP +Q+++ +V ++ K+R
Sbjct: 250 TRDIRQTIFTRLKYTCSAGVAGNKLLSKLGSAHKKPNQQTVIRGRAVRKFLSDFKFTKIR 309
Query: 252 HLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHF-EEKTASWLYYIARGIDHEPVNARLV 310
+LGGKLGD+VV ++ +L + L QL+ EE TA W+Y RGID+ VN+R
Sbjct: 310 NLGGKLGDQVVAAFGTESVSDLLEVPLDQLKLRLGEESTALWVYNTIRGIDNSEVNSRTQ 369
Query: 311 SKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERL-EDDLTLNKRRAQLLTVSFTQET 369
KS+ K F + + + + W++ + ++ RL E+ + NKRR + + +
Sbjct: 370 IKSMLSAKSF--RPSIHSVDQANKWLRIFSADIFSRLVEEGVLENKRRPKTMNLHHRHNG 427
Query: 370 DGKVNSCSRSIALASYKLQDIV--EVSMQVINKTNSAPPISDLTPPLLFLGLSASKFSP- 426
K SC I L D V E++ ++ + + P L L+ S F
Sbjct: 428 QSKARSCP--IPQGVRVLDDSVLYELAQNLLRQIVMEGKVW----PCDNLSLNVSGFEDG 481
Query: 427 LGSHPSIQQFFKPQDHPEPMTS-EHSSLP------EQSTNHDSKKR 465
+ + I F + + + S + P +Q +HDSK+R
Sbjct: 482 ITGNMGIGGFLVKGEEAQGLRSVSNRDNPAGHQETQQQQHHDSKRR 527
Score = 49 (22.3 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 551 DKLVSIEREVEESVGKDIEESLKNVSDVLFN---EKVENLTMENKKSIKNE 598
D+L + + EES+ + I S DV FN E ++L K +++E
Sbjct: 570 DELHPTDAQAEESMQEAIGSSCPRCKDVFFNTPEELQDHLDWHLAKDLQDE 620
Score = 45 (20.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 954 CDKCSQPIDIN---ELQEHQDYHFA 975
C +C + N ELQ+H D+H A
Sbjct: 591 CPRCKD-VFFNTPEELQDHLDWHLA 614
>ZFIN|ZDB-GENE-050417-376 [details] [associations]
symbol:poli "polymerase (DNA directed) iota"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 ZFIN:ZDB-GENE-050417-376
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CTD:11201 HOVERGEN:HBG053634 KO:K03510
EMBL:BC092781 IPI:IPI00481247 RefSeq:NP_001017834.1
UniGene:Dr.78857 ProteinModelPortal:Q568P0 SMR:Q568P0 GeneID:550532
KEGG:dre:550532 InParanoid:Q568P0 NextBio:20879773 Uniprot:Q568P0
Length = 710
Score = 199 (75.1 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 48/129 (37%), Positives = 74/129 (57%)
Query: 1 MTS-RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRH 59
+TS R+I D+DCFY QVE NP+L KPL + Q I+ NY AR GV +
Sbjct: 33 LTSQRVILHFDLDCFYAQVEMIRNPALRTKPLGIQQKYI-----IVTSNYVARELGVNKL 87
Query: 60 MRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDL 119
M +A + CP++ L V+G+ D++ YR +V +L + +VER DE ++D+
Sbjct: 88 MSVTDAVEKCPQLVL-----VKGE-DLTHYREMSYKVTELLMSYCPLVERLGFDENFMDV 141
Query: 120 TDVVHERMK 128
T++V +R+K
Sbjct: 142 TEMVEKRIK 150
Score = 193 (73.0 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 83/308 (26%), Positives = 141/308 (45%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY+ S++ + E+ + LA+ VI E+R A+ S AG+A NK+LAKLV G
Sbjct: 161 GHVYNHE--SVVVDEENIR-LAVGSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLVSGS 217
Query: 225 HKPQKQS-ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q+ +LP S+ ++ + + KV +G K +++ + L + +L+ + L L
Sbjct: 218 FKPNQQTTLLPHSNAELMSSLTGLIKVPGIGYKTREKL-KALGLVNVRDLQLYPLSDLVK 276
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
F E A + +A GID PV +S+ F ++T ++V I+EL +
Sbjct: 277 EFGEMNAKRVQNLACGIDDSPVTPAGPPQSLSDEDSFKK---MSTLEEVLKKIEELLINL 333
Query: 344 CERLEDD------LTLNKRRAQLLTVSFTQET-DGKV-NSCSRSIALASYK-LQDIVEVS 394
ER+ D L L R+ + F +E+ + N I S + + ++ +S
Sbjct: 334 TERMHKDGRQPHTLRLTIRKYTVTNRWFNRESRQCPIPNHTGLKITGGSSEAVPQLLSLS 393
Query: 395 MQVINK-TNSAPPISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSL 453
M++ +K + P + F L A S SI FF H P T++ +
Sbjct: 394 MKLFHKMVDPHQPFHLTLLNVCFSNLQAKS----SSKSSIASFFT---HKSPSTTQ---I 443
Query: 454 PEQSTNHD 461
P Q + D
Sbjct: 444 PSQQVDSD 451
Score = 41 (19.5 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 1016 SFKNSENFKKLKTIDQFFK 1034
S + ++FKK+ T+++ K
Sbjct: 306 SLSDEDSFKKMSTLEEVLK 324
>UNIPROTKB|J3KTN3 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000583136 Uniprot:J3KTN3
Length = 222
Score = 178 (67.7 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 45/123 (36%), Positives = 69/123 (56%)
Query: 23 NPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRG 82
NP L KPL V Q ++ NYEAR GV + M +AK+ CP++ L V G
Sbjct: 4 NPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVRDAKEKCPQLVL-----VNG 53
Query: 83 KADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTF 142
+ D+++YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS
Sbjct: 54 E-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVT 109
Query: 143 VVG 145
V G
Sbjct: 110 VSG 112
Score = 136 (52.9 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 35/114 (30%), Positives = 66/114 (57%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L++ L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 112 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGV 169
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFS 277
KP +Q++L P+S ++++ IK++ +G K + +E L +++ +L+ FS
Sbjct: 170 FKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTA-KCLEALGINSVRDLQTFS 222
>TAIR|locus:2031050 [details] [associations]
symbol:AT1G49980 species:3702 "Arabidopsis thaliana"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 EMBL:CP002684 GO:GO:0016020 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03511 OMA:VHVDCDA HOGENOM:HOG000082709 EMBL:AY508701
IPI:IPI00540157 RefSeq:NP_175420.3 UniGene:At.43723 HSSP:Q97W02
ProteinModelPortal:Q6JDV7 SMR:Q6JDV7 EnsemblPlants:AT1G49980.1
GeneID:841422 KEGG:ath:AT1G49980 TAIR:At1g49980 InParanoid:Q6JDV7
PhylomeDB:Q6JDV7 ProtClustDB:CLSN2681525 Genevestigator:Q6JDV7
Uniprot:Q6JDV7
Length = 671
Score = 173 (66.0 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 52/140 (37%), Positives = 69/140 (49%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
SRI +DMD FY VE +PS+ GKP+AV + I NYEAR GV M G
Sbjct: 102 SRIWLHVDMDAFYAAVETLSDPSIKGKPMAVGGLSM-----ISTANYEARKFGVRAAMPG 156
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
A++ CP+ L VP D +KY + V + S+DEAY+D+T+V
Sbjct: 157 FIARKLCPD--LIFVP-----VDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEV 209
Query: 123 VHERMKSIGHIAASQLSNTF 142
ER S G IA S+ +
Sbjct: 210 CRERGLSGGEIAEELRSSVY 229
Score = 160 (61.4 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 69/260 (26%), Positives = 127/260 (48%)
Query: 172 DTSLMENTEDFQELAIAG-VIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D + ++ TE +E ++G I EE+R++V S+T CSAG+A N++LAK+ ++KP Q
Sbjct: 200 DEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQ 259
Query: 231 SILPQSSVSMLYANLSIKKVRHLGG--KLGDEVV-ETLQCSTMLEL-EKFSLKQLQSHFE 286
+L Q+ S + +S VR +GG K+ + ++ + L T E+ +K SL L + F
Sbjct: 260 FVL-QNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSL--LYALFS 316
Query: 287 EKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCER 346
+ +A + + G+ KSI + F AT + + DE+ E
Sbjct: 317 QSSADFFLSVGLGLGGTNTPQVRSRKSISSERTFA-----ATGDE--RLLYSKLDELAEM 369
Query: 347 LEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQ--DIVEVSMQVINKTNSA 404
L D+ A+ LT+ + ++ S R+++L Y DI++ + +++ +
Sbjct: 370 LSHDMKKEGLTARTLTLKL-KTASFEIRS--RAVSLQRYTCSSDDILKHATKLLK---AE 423
Query: 405 PPISDLTPPLLFLGLSASKF 424
P+S + +GL S+F
Sbjct: 424 LPVS-----VRLIGLRMSQF 438
Score = 65 (27.9 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 46/218 (21%), Positives = 82/218 (37%)
Query: 777 LNSKSCK-DETLTHGQ--VHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRI---RDD 830
L +C D+ L H + + + I ++ +E + N +T+ +D
Sbjct: 402 LQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFVEEIRNSDPSQGTITKFIVQKDS 461
Query: 831 IHLARE--NNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSS-SDHSQMTSATK 887
A++ +N F D K+ S S +S S+E ++DV + SQ+ S
Sbjct: 462 SRQAQDLDDNDSFDLDANKNCLSNDESGNVSFGSHET-SSAHLKDVVEYEERSQIDSGKV 520
Query: 888 ADFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIA 947
PN E K + I +G+ D +++ D+S A+++
Sbjct: 521 I--------PNQECMKKEERLQ---ILEGDSLLKKYKECKPDTSHSMNDNSNATEAVSVF 569
Query: 948 DPTKII-------CDKCS---QPIDINELQEHQDYHFA 975
T+ + C C P + E QEH D+H A
Sbjct: 570 PQTEPLYWIDGYKCVLCGIELPPSFVEERQEHSDFHLA 607
Score = 57 (25.1 bits), Expect = 9.6e-22, Sum P(3) = 9.6e-22
Identities = 44/244 (18%), Positives = 90/244 (36%)
Query: 490 IDKFKSHIESKLDSCNANVDKLVIG-DISEQIKNIAAEN-----VRKYLRTHSKDSNASD 543
+ +F I + D + K ++ D S Q +++ + K ++ + N S
Sbjct: 435 MSQFVEEIRNS-DPSQGTITKFIVQKDSSRQAQDLDDNDSFDLDANKNCLSNDESGNVSF 493
Query: 544 EDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPV 603
E+ + L + E EE D + + N + E+++ L ++ EC
Sbjct: 494 GSHETSSAHLKDVV-EYEERSQIDSGKVIPNQECMKKEERLQILEGDSLLKKYKECKPDT 552
Query: 604 SSKSKDLTNENLGHTFETLPS--PILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPL 661
S D N N P P+ D + C + + E + + + L
Sbjct: 553 SHSMND--NSNATEAVSVFPQTEPLYWIDG--YKCVLCGIELPPSFVEER--QEHSDFHL 606
Query: 662 VKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYET 721
+R+ N S T ++R++ + N K D +DS + I PI + + +
Sbjct: 607 AQRLQNEETGSSSSTTPSKRRILGKEKVNSKPKKQKPDQKDSSKHI--PIHAFFTKSNQN 664
Query: 722 TRQS 725
+ ++
Sbjct: 665 SNET 668
>UNIPROTKB|Q83EN5 [details] [associations]
symbol:dinP "DNA polymerase IV" species:227377 "Coxiella
burnetii RSA 493" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003887
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 182 (69.1 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DMDCFY +E + NP L KP+AV G I NY AR GV +
Sbjct: 25 RKIIHVDMDCFYVAIEMRDNPKLREKPVAVGGA-AHSRGVICTANYIARGYGVQSAISSS 83
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV- 122
AK+ CP + + V ++ KYR G ++ + E++++VE S+DEAY+D++D
Sbjct: 84 YAKKLCPSLIILPV-------NMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCK 136
Query: 123 VHE 125
+H+
Sbjct: 137 IHQ 139
Score = 154 (59.3 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 58/229 (25%), Positives = 100/229 (43%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKV 250
I +EIR ++ + SAG+A NK+LAK+ +KP ++ S L I+K+
Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIKVILPSKADDFVKTLPIEKI 204
Query: 251 RHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLV 310
H GK+ + ++ + T +L+ S + L F + LY + RGID V +
Sbjct: 205 -HGVGKITAQKMKAMNIHTCSDLQALSREALSKSFGSFGVT-LYELCRGIDPRSVEPNRI 262
Query: 311 SKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQETD 370
KS+ F +AT + + L +++ +RL T R Q + + F
Sbjct: 263 RKSVSVEHTFSQD--IATLSECEIELANLFNDLKQRLLKH-TDRCIRKQFVKIKFNDFKI 319
Query: 371 GKVNSCSRSIALASYK--LQDIVEVSMQVINKTNSAPPISDLTPPLLFL 417
K + +++I+L +K L I E + + S+ PLL L
Sbjct: 320 TKAETITQTISLDLFKHLLYQIFERQQKPVRLLGVGVSFSE--DPLLEL 366
>TIGR_CMR|CBU_0280 [details] [associations]
symbol:CBU_0280 "DNA-damage-inducible protein P"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 182 (69.1 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DMDCFY +E + NP L KP+AV G I NY AR GV +
Sbjct: 25 RKIIHVDMDCFYVAIEMRDNPKLREKPVAVGGA-AHSRGVICTANYIARGYGVQSAISSS 83
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV- 122
AK+ CP + + V ++ KYR G ++ + E++++VE S+DEAY+D++D
Sbjct: 84 YAKKLCPSLIILPV-------NMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCK 136
Query: 123 VHE 125
+H+
Sbjct: 137 IHQ 139
Score = 154 (59.3 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 58/229 (25%), Positives = 100/229 (43%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKV 250
I +EIR ++ + SAG+A NK+LAK+ +KP ++ S L I+K+
Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIKVILPSKADDFVKTLPIEKI 204
Query: 251 RHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLV 310
H GK+ + ++ + T +L+ S + L F + LY + RGID V +
Sbjct: 205 -HGVGKITAQKMKAMNIHTCSDLQALSREALSKSFGSFGVT-LYELCRGIDPRSVEPNRI 262
Query: 311 SKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQETD 370
KS+ F +AT + + L +++ +RL T R Q + + F
Sbjct: 263 RKSVSVEHTFSQD--IATLSECEIELANLFNDLKQRLLKH-TDRCIRKQFVKIKFNDFKI 319
Query: 371 GKVNSCSRSIALASYK--LQDIVEVSMQVINKTNSAPPISDLTPPLLFL 417
K + +++I+L +K L I E + + S+ PLL L
Sbjct: 320 TKAETITQTISLDLFKHLLYQIFERQQKPVRLLGVGVSFSE--DPLLEL 366
>UNIPROTKB|Q47155 [details] [associations]
symbol:dinB species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0009432 "SOS response"
evidence=IEP;IDA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:U70214 GO:GO:0000731
GO:GO:0009432 GO:GO:0003887 EMBL:D38582 GO:GO:0019985 PDB:1OK7
PDB:1UNN PDBsum:1OK7 PDBsum:1UNN KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 EMBL:AF483080
EMBL:AF483081 EMBL:AF483082 EMBL:AF483083 EMBL:AF483084
EMBL:AF483085 EMBL:AF483086 EMBL:AF483087 EMBL:AF483088
EMBL:AF483089 EMBL:AF483090 EMBL:AF483091 EMBL:AF483092
EMBL:AF483093 EMBL:AF483094 EMBL:AF483095 EMBL:AF483096
EMBL:AF483097 EMBL:AF483098 EMBL:AF483099 EMBL:AF483100
EMBL:AF483101 EMBL:AF483102 EMBL:AF483103 EMBL:AF483104
EMBL:AF483105 PIR:H64747 RefSeq:NP_414766.1 RefSeq:YP_488526.1
ProteinModelPortal:Q47155 SMR:Q47155 IntAct:Q47155
EnsemblBacteria:EBESCT00000002588 EnsemblBacteria:EBESCT00000014477
GeneID:12932684 GeneID:944922 KEGG:ecj:Y75_p0222 KEGG:eco:b0231
PATRIC:32115577 EchoBASE:EB2935 EcoGene:EG13141 OMA:MNILNEY
ProtClustDB:PRK02406 BioCyc:EcoCyc:G6115-MONOMER
BioCyc:ECOL316407:JW0221-MONOMER BioCyc:MetaCyc:G6115-MONOMER
EvolutionaryTrace:Q47155 Genevestigator:Q47155 Uniprot:Q47155
Length = 351
Score = 173 (66.0 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 44/121 (36%), Positives = 65/121 (53%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DMDCF+ VE + NP+L P+A+ + G I NY AR GV M
Sbjct: 2 RKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRE-RRGVISTANYPARKFGVRSAMPTG 60
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
A + CP + L +P G+ D Y+ A + + S +++ +E S+DEAY+D+TD V
Sbjct: 61 MALKLCPHLTL--LP---GRFDA--YKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSV 113
Query: 124 H 124
H
Sbjct: 114 H 114
Score = 160 (61.4 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 52/192 (27%), Positives = 92/192 (47%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D + ++ T+ A +I +EIR + ++ Q SAG+A K LAK+ ++KP Q
Sbjct: 103 DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQF 162
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
++ + V L + K+ +G K+ +E + T +++K L L F K
Sbjct: 163 VITPAEVPAFLQTLPLAKIPGVG-KVSAAKLEAMGLRTCGDVQKCDLVMLLKRFG-KFGR 220
Query: 292 WLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDL 351
L+ ++GID VN+ + KS+G + +A +D+ HW + + + ERL +L
Sbjct: 221 ILWERSQGIDERDVNSERLRKSVGV------ERTMA--EDIHHWSE--CEAIIERLYPEL 270
Query: 352 T--LNKRRAQLL 361
L K + LL
Sbjct: 271 ERRLAKVKPDLL 282
>CGD|CAL0002818 [details] [associations]
symbol:RAD32 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 CGD:CAL0002818 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 EMBL:AACQ01000019 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 HOGENOM:HOG000065930 RefSeq:XP_720989.1
ProteinModelPortal:Q5AHD1 STRING:Q5AHD1 GeneID:3637340
KEGG:cal:CaO19.866 Uniprot:Q5AHD1
Length = 640
Score = 229 (85.7 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 70/309 (22%), Positives = 140/309 (45%)
Query: 77 VPSV-RGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERM----KSIG 131
+P++ + K + YR R+++ V+ + ++ E+AS+DE YIDL +++R+ +
Sbjct: 131 LPAINKHKVSLDPYRRESRKILRVIGKSFDLTEKASVDECYIDLGREIYKRLIDLFPQLS 190
Query: 132 HIAASQLSNTFV-VGFGPDNNDEDARKAG-VMEWLGQVYSDTDTSLMENTEDFQELA--I 187
+ N++ + P + + G ++ + D D ED+ ++ I
Sbjct: 191 RGSRDNPENSYANLPLIPPTLPLNLKWEGEIINTEKEKSEDNDIVSPPVIEDWDDICFII 250
Query: 188 AGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSI 247
I+ E+R + + + SAG+A K +AKL G KP Q+I+ S+++ N +
Sbjct: 251 GSQILLEVRKDIFEELGYTTSAGLARTKQVAKLAAGFKKPDAQTIIRNSAINSFLTNFEL 310
Query: 248 KKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQ-SHFEEKTASWL----YYIARGIDH 302
V +GGKLG+ ++ + + F + + +EK L Y I RGI+
Sbjct: 311 TDVTGMGGKLGESIINKVNVPPQINSISFIRENFSDASIKEKLGGELGLKVYNIVRGINA 370
Query: 303 EPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLT 362
+ + + KS+ K F ++ D W++ A ++ RL D L+ +L +
Sbjct: 371 IELQSTIEVKSMTSTKNFTSFV-ISNLFDAYDWLKVFAGDLHNRLID---LDSENMELSS 426
Query: 363 VSFTQETDG 371
+ ++ G
Sbjct: 427 TELSNKSKG 435
Score = 93 (37.8 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 6 IALIDMDCFYCQVE-CKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDE 64
IALID++ F+ QVE +LN + P+ Q+N+ +IAV+Y +R G+TR
Sbjct: 49 IALIDLNAFFAQVEQIRLNLT-DQDPVVCAQWNS-----VIAVSYASRKFGITRMDTIAS 102
Query: 65 AKQHCPEI 72
K CP +
Sbjct: 103 CKSKCPNV 110
Score = 61 (26.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 42/202 (20%), Positives = 73/202 (36%)
Query: 783 KDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRD----DIHLARENN 838
+ +TLT G + + T + + ++ + + E N +R+ + H++ NN
Sbjct: 439 RPKTLTLGVLSKNGTRQTRQMQIPIHKDLDKMKDIFFE-NGCVLLREFLEFNTHISLLNN 497
Query: 839 TKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDP- 897
P K+ P V E + T + VS D + T F KE
Sbjct: 498 RT----PAKEIFIWDPKKVKIMELINM-SLTISKFVSVEDRFTLLKTTDTSFNKEEHIAK 552
Query: 898 ---NNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIIC 954
+ E T+++ S S +DI ++ S + TK C
Sbjct: 553 LFRDYEQAPGTIKYSSPPPPPPPAQKKRSKNGQLDIFESLKKKSKPGDFLEELIKTKK-C 611
Query: 955 DKCSQPIDINELQEHQDYHFAL 976
+C +D + EH DYH A+
Sbjct: 612 SRCKLSVD--DPVEHNDYHIAM 631
>UNIPROTKB|Q8EHU9 [details] [associations]
symbol:dinB "DNA polymerase IV" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
ProtClustDB:PRK02406 RefSeq:NP_716739.1 HSSP:Q9UHC5
ProteinModelPortal:Q8EHU9 GeneID:1168948 KEGG:son:SO_1114
PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 177 (67.4 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DMDC++ VE + P GKPLAV + G I NYEAR GV M
Sbjct: 2 RKIIHVDMDCYFAAVEMRDFPEYRGKPLAVGGSRE-RRGVISTCNYEARRFGVRSAMATA 60
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
A++ CP++ L VP G+ + Y++ ++ A+ S ++ ++E S+DEAY+D++D
Sbjct: 61 YAQKLCPDLIL--VP---GRMQV--YKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSD 111
Score = 150 (57.9 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 188 AGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSI 247
A +I E IR +L++T SAG+A K LAK+ L+KP Q ++P V LS+
Sbjct: 119 ATLIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSL 178
Query: 248 KKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNA 307
+++ +G K+ E + +L +T +++ + ++L + F K + L A+GID ++
Sbjct: 179 RQIPGVG-KVTAEKLSSLGLNTCGDVQTYPKQELITRFG-KFGAVLIERAQGIDDRGLSV 236
Query: 308 RLVSKSIGCCKRFPGK--TCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSF 365
KS+G T +Q + IQEL+ + R D ++K+ +L F
Sbjct: 237 SRERKSVGVETTLAQDIYTLEQCQQVMPGLIQELSTRL-SRSAKDRQIHKQVVKLKFSDF 295
Query: 366 TQET 369
Q T
Sbjct: 296 KQTT 299
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 910 SNSINKGNGNADVSPMDTVDIINTIA 935
++ +NK NG + P + I T++
Sbjct: 152 ASDLNKPNGQYVIPPDKVPEFIRTLS 177
>TIGR_CMR|SO_1114 [details] [associations]
symbol:SO_1114 "DNA-damage-inducible protein P"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:NP_716739.1 HSSP:Q9UHC5 ProteinModelPortal:Q8EHU9
GeneID:1168948 KEGG:son:SO_1114 PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 177 (67.4 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DMDC++ VE + P GKPLAV + G I NYEAR GV M
Sbjct: 2 RKIIHVDMDCYFAAVEMRDFPEYRGKPLAVGGSRE-RRGVISTCNYEARRFGVRSAMATA 60
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
A++ CP++ L VP G+ + Y++ ++ A+ S ++ ++E S+DEAY+D++D
Sbjct: 61 YAQKLCPDLIL--VP---GRMQV--YKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSD 111
Score = 150 (57.9 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 188 AGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSI 247
A +I E IR +L++T SAG+A K LAK+ L+KP Q ++P V LS+
Sbjct: 119 ATLIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSL 178
Query: 248 KKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNA 307
+++ +G K+ E + +L +T +++ + ++L + F K + L A+GID ++
Sbjct: 179 RQIPGVG-KVTAEKLSSLGLNTCGDVQTYPKQELITRFG-KFGAVLIERAQGIDDRGLSV 236
Query: 308 RLVSKSIGCCKRFPGK--TCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSF 365
KS+G T +Q + IQEL+ + R D ++K+ +L F
Sbjct: 237 SRERKSVGVETTLAQDIYTLEQCQQVMPGLIQELSTRL-SRSAKDRQIHKQVVKLKFSDF 295
Query: 366 TQET 369
Q T
Sbjct: 296 KQTT 299
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 910 SNSINKGNGNADVSPMDTVDIINTIA 935
++ +NK NG + P + I T++
Sbjct: 152 ASDLNKPNGQYVIPPDKVPEFIRTLS 177
>FB|FBgn0037554 [details] [associations]
symbol:DNApol-iota "DNApol-iota" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
EMBL:AE014297 GO:GO:0003684 GO:GO:0003887 GO:GO:0019985
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 KO:K03510 EMBL:AY051762 EMBL:AB049434
RefSeq:NP_649772.1 RefSeq:NP_731214.1 UniGene:Dm.9926 SMR:Q9VHV1
IntAct:Q9VHV1 MINT:MINT-308720 EnsemblMetazoa:FBtr0081797
EnsemblMetazoa:FBtr0081798 GeneID:40965 KEGG:dme:Dmel_CG7602
UCSC:CG7602-RA CTD:40965 FlyBase:FBgn0037554 InParanoid:Q9VHV1
OMA:CCAGIAY OrthoDB:EOG42RBPH GenomeRNAi:40965 NextBio:821498
Uniprot:Q9VHV1
Length = 737
Score = 178 (67.7 bits), Expect = 9.0e-21, Sum P(3) = 9.0e-21
Identities = 47/135 (34%), Positives = 74/135 (54%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DMD FY QVE +P+L K L + Q N ++ NY AR KGVT+ M
Sbjct: 15 RTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNI-----VVTCNYVARAKGVTKLMLIA 69
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
EA++ CP++ L V G+ D++ YR + + +L ++ +VE+ DE ++D+T +V
Sbjct: 70 EAQRICPDLVL-----VNGE-DLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALV 123
Query: 124 HERMKSIGHIAASQL 138
R H+A + L
Sbjct: 124 ELRQ---AHVAEALL 135
Score = 156 (60.0 bits), Expect = 9.0e-21, Sum P(3) = 9.0e-21
Identities = 73/273 (26%), Positives = 127/273 (46%)
Query: 183 QELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLY 242
Q LAI I +EIR + + C AGIA+NK+LAKLV H+P +Q++L +
Sbjct: 159 QRLAIGTRIAQEIREELKLRLGITCCAGIAYNKLLAKLVGSSHEPNQQTVLVSTYAEQFM 218
Query: 243 ANLS-IKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGID 301
L +K+V +G K ++E S++ +L++ + ++ F +TA+ L +A G D
Sbjct: 219 RELGDLKRVTGIGQKTQCLLLEA-GMSSVEQLQQCDMDVMRKKFGFETATRLRDLAFGRD 277
Query: 302 HEPVNARLVSKSIG---CCKRFPGKTCLATRQDVSHWIQELADEVCE--RLEDDLTLNKR 356
V K+IG CK +T + R + ++ L ++V E R+ + + R
Sbjct: 278 TSLVRPSGKPKTIGMEDACKPISVRTDVEERFRML--LKRLVEQVAEDGRVPIAIKVVLR 335
Query: 357 RAQLLTVSFTQETDG--------KVNSCSRSIALASYKLQDIVEVSM-QVINKTNSAPPI 407
+ S +ET K + C ++ +L D + + +++ + I
Sbjct: 336 KFDSQKKSSHRETKQANILPSLFKTSMCPGETGVSKVQLADGAQDKLLKIVMRLFER--I 393
Query: 408 SDLTPP--LLFLGLSASKFSP--LGSHPSIQQF 436
D++ P + LGL+ SKF +GS SI F
Sbjct: 394 VDMSKPFNITLLGLAFSKFQERKVGSS-SIANF 425
Score = 61 (26.5 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 551 DKLVSIEREVEESV---GKDIEESLKNVSDVLFNE-KVENLTMENKKSIKNECLSPVSSK 606
DKL+ I + E + K +L ++ F E KV + ++ N IK L S
Sbjct: 380 DKLLKIVMRLFERIVDMSKPFNITLLGLAFSKFQERKVGSSSIANFL-IKKADLEVQSIT 438
Query: 607 SKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENK-TLKSKEELPLVKRV 665
S LTN +L T T SP TSD S+P K S + + T S + L
Sbjct: 439 S--LTNTSL--TSPTAESP--TSDECAFRSSPTTFKPSDQFYRRRATTASPVPMLLDNGS 492
Query: 666 DNTIPNSFEFITYTRRQVKP 685
++ NS +F ++ +V+P
Sbjct: 493 ESAATNS-DFSDFSETEVEP 511
Score = 48 (22.0 bits), Expect = 9.0e-21, Sum P(3) = 9.0e-21
Identities = 25/112 (22%), Positives = 45/112 (40%)
Query: 846 IKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKST 905
+ +T T P+ S S+E ++ SD AT A + D +E +
Sbjct: 440 LTNTSLTSPT-AESPTSDECAFRSSPTTFKPSDQFYRRRATTASPVPMLLDNGSESAATN 498
Query: 906 VQFHSNSINKGNGNADVSPMDTVDIINTIADSSTV-DSAINIADPTKI-ICD 955
F S + + S + + + ++ V DSA +A P+K+ +CD
Sbjct: 499 SDFSDFSETEVEPSPKKSRIGRLLVSKRSRLAADVGDSAAEVASPSKLRVCD 550
>TIGR_CMR|CPS_1040 [details] [associations]
symbol:CPS_1040 "DNA polymerase IV" species:167879
"Colwellia psychrerythraea 34H" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR003583
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00278
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 RefSeq:YP_267789.1
HSSP:Q9UNA4 ProteinModelPortal:Q487H6 STRING:Q487H6 GeneID:3521759
KEGG:cps:CPS_1040 PATRIC:21465357 OMA:QSLGMRT
BioCyc:CPSY167879:GI48-1126-MONOMER Uniprot:Q487H6
Length = 352
Score = 171 (65.3 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 39/113 (34%), Positives = 61/113 (53%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEAKQH 68
IDMDCFY +E + P PLAV + NY+AR GV M +AKQ
Sbjct: 10 IDMDCFYAAIEMRDFPEYQNIPLAVG--GDGPRSVLCTSNYQARQFGVRSAMPAIKAKQL 67
Query: 69 CPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
CP +++ V G+ D+ Y+ + + + S +++++E S+DEAY+D+TD
Sbjct: 68 CPHLKI-----VHGRMDV--YKETSKNIREIFSRYTDLIEPLSLDEAYLDVTD 113
Score = 146 (56.5 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 50/215 (23%), Positives = 100/215 (46%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D + ++ T+ A +I E IRA + ++ SAGIA NK LAK+ +KP Q
Sbjct: 105 DEAYLDVTDATMCQGSATLIAERIRADIFNELNLTASAGIAPNKFLAKIASDENKPNGQC 164
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
++ V+ LS+KK+ +G K +++ T ++ + +++ LQ+ K A+
Sbjct: 165 VITPDKVANFVEQLSLKKIPGIGPKTFEKL-NRHGYVTCADVRQSNIRALQN-IVGKFAN 222
Query: 292 WLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERL--ED 349
LY + G+D+ + KS+ ++T+ + I L ++ RL
Sbjct: 223 SLYLKSHGVDNRDLEVSRQRKSLAIETTLAHD--ISTQDECKLVIDSLYQKLLTRLAPHS 280
Query: 350 DLTLNKRRAQLLTVSFTQET-DGKVNSCSRSIALA 383
+ + ++ +L F Q T + + N C +++ ++
Sbjct: 281 NREIIRQGVKLKFTDFNQTTVETQSNECQQALFIS 315
Score = 44 (20.5 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 116 YIDLTDVVHERMKSIGHIAASQLSNTFVVGFGPDNND 152
Y+ DV ++++ +I ++ ++ G DN D
Sbjct: 199 YVTCADVRQSNIRALQNIVGKFANSLYLKSHGVDNRD 235
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 480 LALNRIERKL-IDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKD 538
L ++R + L I+ +H S D C +D L ++ + E +R+ ++ D
Sbjct: 236 LEVSRQRKSLAIETTLAHDISTQDECKLVIDSLYQKLLTRLAPHSNREIIRQGVKLKFTD 295
Query: 539 SNASDEDEES 548
N + + +S
Sbjct: 296 FNQTTVETQS 305
>UNIPROTKB|Q5Q9G8 [details] [associations]
symbol:POLK "Polymerase kappa isoform 1" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 UniGene:Hs.732105 HGNC:HGNC:9183
HOVERGEN:HBG101212 EMBL:AC026424 EMBL:AY769929 IPI:IPI01013677
SMR:Q5Q9G8 STRING:Q5Q9G8 Ensembl:ENST00000380481 Uniprot:Q5Q9G8
Length = 780
Score = 247 (92.0 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 119/445 (26%), Positives = 193/445 (43%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV + + NY AR GV M G
Sbjct: 10 SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPG 64
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR +EV +L+++ S+DEAY+++T
Sbjct: 65 FIAKRLCPQLII--VPP-----NFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKH 117
Query: 123 VHERM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVM---EWLGQVYSDTD-- 172
+ ER K I G + E R + E V D
Sbjct: 118 LEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPF 177
Query: 173 -TSLME--NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ E N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 178 QVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 237
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 238 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 294
Query: 284 HFEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELAD 341
+T SW Y+ I+ G+ + KS+ + F + A Q L
Sbjct: 295 LLFSET-SWHYFLHISLGLGSTHLTRDGERKSMSVERTF-SEINKAEEQ------YSLCQ 346
Query: 342 EVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKT 401
E+C L DL + + + +T+ + + +V + + +++ ++I ++ +++ KT
Sbjct: 347 ELCSELAQDLQKERLKGRTVTIKL-KNVNFEVKTRASTVSSVVSTAEEIFAIAKELL-KT 404
Query: 402 NSAPPISDLTPPLLF--LGLSASKF 424
+D PL +G+ S F
Sbjct: 405 EID---ADFPHPLRLRLMGVRISSF 426
Score = 71 (30.1 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 59/240 (24%), Positives = 96/240 (40%)
Query: 501 LDSCNANVDKLVIG-DISEQIKNIAAENVRKYLRTHSKD----SNASDEDEESFNDKLVS 555
L++ N +VD+ + G ISE K + +V + + K+ S+ ++ + + K+
Sbjct: 546 LEALNKHVDECLDGPSISENFKMFSCSHVSA-TKVNKKENVPASSLCEKQDYEAHPKIKE 604
Query: 556 IEREVEESVGKDIEESLKNVS-DVLFNE-KVENLTMENKKSIKNECLSPVSSKSKDLTNE 613
I ++ I+ S K S D L N+ E + KS E SS + L NE
Sbjct: 605 ISSVDCIALVDTIDNSSKAESIDALSNKHSKEECSSLPSKSFNIEHCHQNSSSTVSLENE 664
Query: 614 NLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVK-RVDNTIPNS 672
++G + P L + + C NV E KT +L L VD + S
Sbjct: 665 DVGSFRQEYRQPYLCEVKT-GQALVCP---VCNV-EQKT----SDLTLFNVHVDVCLNKS 715
Query: 673 FEFITYTRRQVKPENISNGNNSDNKTDDEDSPQ-VITKPIGSISMRKYETTRQSHLNKPK 731
F I R+ K ++ S T Q +T+ M KY T+++ N PK
Sbjct: 716 F--IQELRKD-KFNPVNQPKESSRSTGSSSGVQKAVTRTKRPGLMTKYSTSKKIKPNNPK 772
>UNIPROTKB|Q9UBT6 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IMP]
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 EMBL:CH471084 EMBL:AB036934
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 KO:K03511
EMBL:AB027564 EMBL:AF163570 EMBL:AF194973 EMBL:AF315602
EMBL:AF318313 EMBL:AK091659 EMBL:AK314610 EMBL:AY273797
EMBL:BC014955 EMBL:BC050718 EMBL:AB036935 IPI:IPI00033151
IPI:IPI00218100 IPI:IPI00552440 IPI:IPI00552703 RefSeq:NP_057302.1
UniGene:Hs.732105 PDB:1T94 PDB:2OH2 PDB:2W7O PDB:2W7P PDB:3IN5
PDB:3PZP PDBsum:1T94 PDBsum:2OH2 PDBsum:2W7O PDBsum:2W7P
PDBsum:3IN5 PDBsum:3PZP ProteinModelPortal:Q9UBT6 SMR:Q9UBT6
IntAct:Q9UBT6 STRING:Q9UBT6 PhosphoSite:Q9UBT6 DMDM:59798438
PaxDb:Q9UBT6 PRIDE:Q9UBT6 Ensembl:ENST00000241436
Ensembl:ENST00000352007 Ensembl:ENST00000508526
Ensembl:ENST00000510815 Ensembl:ENST00000515295 GeneID:51426
KEGG:hsa:51426 UCSC:uc003kdw.3 UCSC:uc003keb.3 UCSC:uc010izq.3
CTD:51426 GeneCards:GC05P074843 HGNC:HGNC:9183 MIM:605650
neXtProt:NX_Q9UBT6 PharmGKB:PA33503 HOVERGEN:HBG101212
InParanoid:Q9UBT6 OMA:TCTELYQ OrthoDB:EOG4Z8XVV BindingDB:Q9UBT6
ChEMBL:CHEMBL5365 EvolutionaryTrace:Q9UBT6 GenomeRNAi:51426
NextBio:54977 ArrayExpress:Q9UBT6 Bgee:Q9UBT6 Genevestigator:Q9UBT6
Uniprot:Q9UBT6
Length = 870
Score = 247 (92.0 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 119/445 (26%), Positives = 193/445 (43%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV + + NY AR GV M G
Sbjct: 100 SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPG 154
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR +EV +L+++ S+DEAY+++T
Sbjct: 155 FIAKRLCPQLII--VPP-----NFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKH 207
Query: 123 VHERM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVM---EWLGQVYSDTD-- 172
+ ER K I G + E R + E V D
Sbjct: 208 LEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPF 267
Query: 173 -TSLME--NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ E N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 268 QVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 327
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 328 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 384
Query: 284 HFEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELAD 341
+T SW Y+ I+ G+ + KS+ + F + A Q L
Sbjct: 385 LLFSET-SWHYFLHISLGLGSTHLTRDGERKSMSVERTF-SEINKAEEQ------YSLCQ 436
Query: 342 EVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKT 401
E+C L DL + + + +T+ + + +V + + +++ ++I ++ +++ KT
Sbjct: 437 ELCSELAQDLQKERLKGRTVTIKL-KNVNFEVKTRASTVSSVVSTAEEIFAIAKELL-KT 494
Query: 402 NSAPPISDLTPPLLF--LGLSASKF 424
+D PL +G+ S F
Sbjct: 495 EID---ADFPHPLRLRLMGVRISSF 516
Score = 71 (30.1 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 59/240 (24%), Positives = 96/240 (40%)
Query: 501 LDSCNANVDKLVIG-DISEQIKNIAAENVRKYLRTHSKD----SNASDEDEESFNDKLVS 555
L++ N +VD+ + G ISE K + +V + + K+ S+ ++ + + K+
Sbjct: 636 LEALNKHVDECLDGPSISENFKMFSCSHVSA-TKVNKKENVPASSLCEKQDYEAHPKIKE 694
Query: 556 IEREVEESVGKDIEESLKNVS-DVLFNE-KVENLTMENKKSIKNECLSPVSSKSKDLTNE 613
I ++ I+ S K S D L N+ E + KS E SS + L NE
Sbjct: 695 ISSVDCIALVDTIDNSSKAESIDALSNKHSKEECSSLPSKSFNIEHCHQNSSSTVSLENE 754
Query: 614 NLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVK-RVDNTIPNS 672
++G + P L + + C NV E KT +L L VD + S
Sbjct: 755 DVGSFRQEYRQPYLCEVKT-GQALVCP---VCNV-EQKT----SDLTLFNVHVDVCLNKS 805
Query: 673 FEFITYTRRQVKPENISNGNNSDNKTDDEDSPQ-VITKPIGSISMRKYETTRQSHLNKPK 731
F I R+ K ++ S T Q +T+ M KY T+++ N PK
Sbjct: 806 F--IQELRKD-KFNPVNQPKESSRSTGSSSGVQKAVTRTKRPGLMTKYSTSKKIKPNNPK 862
>UNIPROTKB|Q74H50 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 166 (63.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 47/118 (39%), Positives = 64/118 (54%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV-NYEARHKGVTRHMRG 62
R I IDM+ F+ VE + NPSL GKP+AVV G ++ +YEAR GV M
Sbjct: 9 RTILHIDMNAFFASVEQQANPSLQGKPIAVVG----SGRTVVTTASYEARAFGVKTGMNK 64
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
EA Q CP + L V G D KY + ++ + +F+ VE SIDEA++D+T
Sbjct: 65 WEALQACPHLIL-----VVG--DNRKYTHTSTQINRIFRDFTPEVETFSIDEAFLDVT 115
Score = 139 (54.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D + ++ T A I I+A + + CS GIA NK+LAKL + KP +
Sbjct: 108 DEAFLDVTGSLALFGSAETIACRIKALIRHRFGLTCSIGIAPNKLLAKLASDMKKPDGLT 167
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
I+ V+ L + I+ + +G K ++ +L T EL +F ++ L+ F
Sbjct: 168 IIRPEEVTRLMEIIPIQDLCGIGVKTRKQL-NSLGIQTCGELGRFPVEILRRTFGV-IGD 225
Query: 292 WLYYIARGIDHEPV----NARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERL 347
L+ + +GID PV A V KS+G L R+D+ ++ +L++ V R
Sbjct: 226 RLHLMGKGIDDSPVVPVEEAEEV-KSVGHSMTLDRD--LTARRDILKYLLQLSEMVGRRA 282
Query: 348 E------DDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQV 397
+ L R A TV Q+T + + + I + K+ D E+ V
Sbjct: 283 RRYGVAGKTVHLTIRYADFTTVG-KQQTRNQATNSTEEIYAEAVKILDTFELLQPV 337
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 913 INKGNGNADVSPMDTVDIINTIADSSTVD 941
+ KG ++ V P++ + + ++ S T+D
Sbjct: 230 MGKGIDDSPVVPVEEAEEVKSVGHSMTLD 258
>TIGR_CMR|GSU_0043 [details] [associations]
symbol:GSU_0043 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 166 (63.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 47/118 (39%), Positives = 64/118 (54%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV-NYEARHKGVTRHMRG 62
R I IDM+ F+ VE + NPSL GKP+AVV G ++ +YEAR GV M
Sbjct: 9 RTILHIDMNAFFASVEQQANPSLQGKPIAVVG----SGRTVVTTASYEARAFGVKTGMNK 64
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
EA Q CP + L V G D KY + ++ + +F+ VE SIDEA++D+T
Sbjct: 65 WEALQACPHLIL-----VVG--DNRKYTHTSTQINRIFRDFTPEVETFSIDEAFLDVT 115
Score = 139 (54.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D + ++ T A I I+A + + CS GIA NK+LAKL + KP +
Sbjct: 108 DEAFLDVTGSLALFGSAETIACRIKALIRHRFGLTCSIGIAPNKLLAKLASDMKKPDGLT 167
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
I+ V+ L + I+ + +G K ++ +L T EL +F ++ L+ F
Sbjct: 168 IIRPEEVTRLMEIIPIQDLCGIGVKTRKQL-NSLGIQTCGELGRFPVEILRRTFGV-IGD 225
Query: 292 WLYYIARGIDHEPV----NARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERL 347
L+ + +GID PV A V KS+G L R+D+ ++ +L++ V R
Sbjct: 226 RLHLMGKGIDDSPVVPVEEAEEV-KSVGHSMTLDRD--LTARRDILKYLLQLSEMVGRRA 282
Query: 348 E------DDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQV 397
+ L R A TV Q+T + + + I + K+ D E+ V
Sbjct: 283 RRYGVAGKTVHLTIRYADFTTVG-KQQTRNQATNSTEEIYAEAVKILDTFELLQPV 337
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 913 INKGNGNADVSPMDTVDIINTIADSSTVD 941
+ KG ++ V P++ + + ++ S T+D
Sbjct: 230 MGKGIDDSPVVPVEEAEEVKSVGHSMTLD 258
>UNIPROTKB|Q81M86 [details] [associations]
symbol:dinB "DNA polymerase IV" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 198 (74.8 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 46/118 (38%), Positives = 68/118 (57%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R+I +DM+CF+ VE + SL GKPLAV + G II +YEAR G+ M
Sbjct: 10 RVILHVDMNCFFASVEIAHDSSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLW 69
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
EAK+ CP++ + R P+ + YR A ++ +LS F+ ++ SIDE Y+D+TD
Sbjct: 70 EAKRLCPQL-IVRRPN------FTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD 120
Score = 104 (41.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 46/209 (22%), Positives = 100/209 (47%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKV 250
I + I+ A+L++ Q CS GIA N LAK + KP ++L + + + L + +
Sbjct: 130 IAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLGITVLRKRDIPEMIWPLPVGAM 189
Query: 251 RHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLV 310
+G K +++ + + T+ +L K + +++ + L A+G+D V+ +
Sbjct: 190 HGIGEKTAEKLND-IHIQTIEQLAKGNEHIIRAKIGKHGVD-LQRRAKGMDDREVDPSQM 247
Query: 311 S--KSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQE 368
KS+G F K + +++ +Q L+ V +RL+ TL Q++ + +
Sbjct: 248 GQHKSVGNSMTF-SKD-MDEEKELLDMLQRLSKSVSKRLQKR-TLVSYNIQIM-IKYH-- 301
Query: 369 TDGKVNSCSRSIALASYKLQDIVEVSMQV 397
D + + S+ + A ++ +DI + + ++
Sbjct: 302 -DRRTVTRSKQLKNAIWEERDIFQAASRL 329
>TIGR_CMR|BA_4366 [details] [associations]
symbol:BA_4366 "DNA-damage-inducible protein P, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 198 (74.8 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 46/118 (38%), Positives = 68/118 (57%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R+I +DM+CF+ VE + SL GKPLAV + G II +YEAR G+ M
Sbjct: 10 RVILHVDMNCFFASVEIAHDSSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLW 69
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
EAK+ CP++ + R P+ + YR A ++ +LS F+ ++ SIDE Y+D+TD
Sbjct: 70 EAKRLCPQL-IVRRPN------FTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD 120
Score = 104 (41.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 46/209 (22%), Positives = 100/209 (47%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKV 250
I + I+ A+L++ Q CS GIA N LAK + KP ++L + + + L + +
Sbjct: 130 IAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLGITVLRKRDIPEMIWPLPVGAM 189
Query: 251 RHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLV 310
+G K +++ + + T+ +L K + +++ + L A+G+D V+ +
Sbjct: 190 HGIGEKTAEKLND-IHIQTIEQLAKGNEHIIRAKIGKHGVD-LQRRAKGMDDREVDPSQM 247
Query: 311 S--KSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQE 368
KS+G F K + +++ +Q L+ V +RL+ TL Q++ + +
Sbjct: 248 GQHKSVGNSMTF-SKD-MDEEKELLDMLQRLSKSVSKRLQKR-TLVSYNIQIM-IKYH-- 301
Query: 369 TDGKVNSCSRSIALASYKLQDIVEVSMQV 397
D + + S+ + A ++ +DI + + ++
Sbjct: 302 -DRRTVTRSKQLKNAIWEERDIFQAASRL 329
>UNIPROTKB|J3KQ09 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KQ09 Ensembl:ENST00000406285
Uniprot:J3KQ09
Length = 661
Score = 246 (91.7 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 61/164 (37%), Positives = 92/164 (56%)
Query: 2 TSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMR 61
+SR+I +D+DCFY QVE NP L KPL V Q ++ NYEAR GV + M
Sbjct: 51 SSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMN 105
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+AK+ CP++ L V G+ D+++YR +V +L EFS +VER DE ++DLT+
Sbjct: 106 VRDAKEKCPQLVL-----VNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTE 159
Query: 122 VVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLG 165
+V +R++ + + +LS V G +N + A +E LG
Sbjct: 160 MVEKRLQQL---QSDELSAVTVSGHVYNNQCIGYKTAKCLEALG 200
Score = 61 (26.5 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 73/352 (20%), Positives = 137/352 (38%)
Query: 262 VETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFP 321
+E L +++ +L+ FS K L+ A + ++ G D+ PV +S F
Sbjct: 196 LEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSF- 254
Query: 322 GKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQETD-GKVN-SCS-- 377
K C ++ + + I+EL + R+ D +L+ ++ E G+ + C
Sbjct: 255 -KKC-SSEVEAKNKIEELLASLLNRVCQD-GRKPHTVRLIIRRYSSEKHYGRESRQCPIP 311
Query: 378 ----RSIALASYKLQD-IVEVSMQVI-NKTNSAPPISDLTPPLLFLGLSASKFSPLGSHP 431
+ + +Y + +V++ M++ N N P + F L A + G
Sbjct: 312 SHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGL-- 369
Query: 432 SIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLID 491
I + P + +HS + + D K +T +F L RIE
Sbjct: 370 -IDYYLMPSLSTTSRSGKHSFKMKDTHMEDFPKDKETNRDF-------LPSGRIEST--- 418
Query: 492 KFKSHIESKLDSCNANVDKLVIGDISE----QIKNIAAENVRKYLRTHSKDSNASDEDEE 547
++ ES LD+ N + +K DI+E + + V K L ++ S + E
Sbjct: 419 --RTR-ESPLDTTNFSKEK----DINEFPLCSLPEGVDQEVFKQLPVDIQEEILSGKSRE 471
Query: 548 SFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNEC 599
F K S+ + S G S K + D+ N + ++L+ + S + C
Sbjct: 472 KFQGK-GSVSCPLHASRGVLSFFSKKQMQDIPINPR-DHLSSSKQVSSVSPC 521
>MGI|MGI:1349767 [details] [associations]
symbol:Polk "polymerase (DNA directed), kappa" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=TAS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 MGI:MGI:1349767 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
CleanEx:MM_POLK PDB:4FJO PDBsum:4FJO GeneTree:ENSGT00530000062942
HOGENOM:HOG000082711 KO:K03511 CTD:51426 HOVERGEN:HBG101212
OMA:TCTELYQ OrthoDB:EOG4Z8XVV EMBL:AB027563 EMBL:AF163571
EMBL:AB040765 EMBL:BC052820 IPI:IPI00131620 IPI:IPI00462547
RefSeq:NP_036178.1 UniGene:Mm.89926 PDB:2LSJ PDBsum:2LSJ
ProteinModelPortal:Q9QUG2 SMR:Q9QUG2 IntAct:Q9QUG2 STRING:Q9QUG2
PhosphoSite:Q9QUG2 PRIDE:Q9QUG2 Ensembl:ENSMUST00000022172
GeneID:27015 KEGG:mmu:27015 UCSC:uc007rne.1 InParanoid:Q9QUG2
NextBio:304949 Bgee:Q9QUG2 Genevestigator:Q9QUG2
GermOnline:ENSMUSG00000021668 Uniprot:Q9QUG2
Length = 852
Score = 165 (63.1 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I +DMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LATSNYHARRFGVRAAMPGFIA 156
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP++ + VP + KYR +EV +L+E+ S+DEAY+++T + E
Sbjct: 157 KRLCPQLII--VPP-----NFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQE 209
Query: 126 R 126
R
Sbjct: 210 R 210
Score = 144 (55.7 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 65/240 (27%), Positives = 111/240 (46%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIK 248
+V+EIR + KT SAGIA N +LAK+ +KP Q ILP S M + +L I+
Sbjct: 292 VVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKDLPIR 351
Query: 249 KVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYY--IARGIDHEPVN 306
KV +G K+ ++++ L T EL + + L S +T SW Y+ IA G+ +
Sbjct: 352 KVSGIG-KVTEKMLMALGIVTCTEL--YQQRALLSLLFSET-SWHYFLHIALGLGSTDLA 407
Query: 307 ARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFT 366
KS+ + F T + S L E+C L DL + + +T+
Sbjct: 408 RDGERKSMSVERTF--SEISKTEEQYS-----LCQELCAELAHDLQKEGLKGRTVTIKL- 459
Query: 367 QETDGKVNSCSRSIALASYKLQDIVEVSMQVIN-KTNSAPPISDLTPPLLFLGLSASKFS 425
+ + +V + + ++ A ++I ++ +++ + N P L L +G+ S FS
Sbjct: 460 KNVNFEVKTRASTVPAAISTAEEIFAIAKELLRTEVNVGSP-HPLR--LRLMGVRMSTFS 516
Score = 51 (23.0 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 27/120 (22%), Positives = 58/120 (48%)
Query: 821 TNAMTRIRDDIHLARENNT--KFLADPIKDTESTGPSNVISTES-NEVIDQTKIRDVSSS 877
+ A+ ++ + + +N F+ P+ E G +S E+ NE +D+ + S+S
Sbjct: 598 SQALKKLSESFETSENSNDCQTFIC-PVCFREQEG----VSLEAFNEHVDEC-LDGPSTS 651
Query: 878 DHSQMTS---ATKADF-IKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINT 933
++S+++ A+ AD KE P+ +C+ +G+ N +++ +D VD+ T
Sbjct: 652 ENSKISCYSHASSADIGQKEDVHPSIPLCEK----------RGHENGEITLVDGVDLTGT 701
>UNIPROTKB|F1MHR0 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:DAAA02057088 IPI:IPI00687719
Ensembl:ENSBTAT00000012034 Uniprot:F1MHR0
Length = 701
Score = 155 (59.6 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 59/227 (25%), Positives = 105/227 (46%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ + + L + IV E+R A+ + AG+A NK+LAKLV G+
Sbjct: 144 GHVYNNQPVNPRDTLHI--RLLVGSQIVAEMREAMYQQLGLTGCAGVASNKLLAKLVSGV 201
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q++L P+SS ++++ IK++ +G K + E L S++ +L+ F K L+
Sbjct: 202 FKPNQQTVLLPESSQELIHSLNHIKEMPGIGYKTTKRL-EALGISSVRDLQTFPSKVLEK 260
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
A + ++ G D PV +S F K C ++ + I+EL +
Sbjct: 261 ELGISVAQRIQKLSFGEDDSPVTPSGPPQSFSEEDSF--KKC-SSEVEAKTKIEELLASL 317
Query: 344 CERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDI 390
R+ D +L+ ++ E N SR + S+ +Q +
Sbjct: 318 LNRVCQD-GRKPHTIRLIIRRYSSEKH--YNRESRQCPIPSHIIQKL 361
Score = 153 (58.9 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R+I +D+DCFY QVE NP L KPL V Q ++ NYEAR GV + M
Sbjct: 40 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMSVR 94
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSE 102
+AK+ CP++ L V G+ D+++YR +V ++ +
Sbjct: 95 DAKEKCPQLVL-----VNGE-DLTRYREMSYKVTEMVEK 127
Score = 49 (22.3 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 23/79 (29%), Positives = 34/79 (43%)
Query: 712 GSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRK 771
G +S+ + + S LN PK P + Q ++ EP S G S S Y+ +
Sbjct: 531 GVLSLFSTKQKQDSSLN-PK--DHVPKSKQVSSVSPCEPGTSG---GSSSS----YVSSQ 580
Query: 772 KERERLNSKSCKDETLTHG 790
KE S KDE ++ G
Sbjct: 581 KEYSHYLDSSLKDERMSQG 599
>UNIPROTKB|Q8AWW1 [details] [associations]
symbol:DINB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0019985 "translesion synthesis" evidence=TAS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005654 GO:GO:0003684 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0006297 GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 EMBL:AY118271 IPI:IPI00586140
RefSeq:NP_989514.1 UniGene:Gga.42393 SMR:Q8AWW1 STRING:Q8AWW1
Ensembl:ENSGALT00000024123 GeneID:374003 KEGG:gga:374003
InParanoid:Q8AWW1 NextBio:20813531 Uniprot:Q8AWW1
Length = 867
Score = 263 (97.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 159/626 (25%), Positives = 275/626 (43%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I IDMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 104 IVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 158
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP + + VP + KYR +EV +L+E+ +DEAY+++T+ + E
Sbjct: 159 KKLCPHLTI--VP-----LNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHLEE 211
Query: 126 RMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLG-----QVYSDTDTSLMENTE 180
R+ + NT + N ED G + G +++ D TS+M++
Sbjct: 212 RL-NWPEDKRRYFLNTENT---TEKNKEDINIPGTVNIDGYSSSPELFED-GTSVMDDDS 266
Query: 181 DFQELAIAGVIV---------EEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
++ ++ V+V +EIR + KTQ SAGIA N +LAK+ +KP Q
Sbjct: 267 GQRDQSLKNVVVFGTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQC 326
Query: 232 -ILPQ-SSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSH-FEEK 288
I P+ +V +L I+KV +G K+ +++++ L T EL + + L S F E
Sbjct: 327 RISPERQAVLDFIKDLPIRKVPGIG-KVTEKMLKALGIVTCSEL--YQQRALLSLLFSE- 382
Query: 289 TASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCER 346
ASW + I+ G+ + KS+ + F ++ +D L E+C
Sbjct: 383 -ASWRSFLDISLGLGSTHLEKDGERKSMSTERTFSE---ISKAEDQ----YSLCQELCRE 434
Query: 347 LEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQD-IVEVSMQVIN-KTNSA 404
L DL + + +T+ + + +V + + ++ L+S +D I V+ ++ + +S
Sbjct: 435 LAQDLQKEGLKGKTVTLKL-KNVNFEVKTRASTV-LSSVSTEDEIFAVAKMLLGTEIDSV 492
Query: 405 PPISDLTPPLLFLGLSA--SKFSPLGSHPSIQQFFKPQ-----DHPEPMTSEHSSLPEQS 457
P L L+ + +S S+ SI+ F K +P S +L + S
Sbjct: 493 AP-HPLRIRLMGVRVSGFLSEEEKKYQQKSIKSFLKSGKELDFSRLQPGRSNQENLTKNS 551
Query: 458 --TNHDS---KKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIE--SKL-DSCNANVD 509
++ S KKR LN N P + ++ + + + +E +K+ D +NV
Sbjct: 552 EASSRGSFFDKKRAARQLNSNNLFPNE-SVGKQHFHGVKSSANFVEEANKVTDLQKSNVC 610
Query: 510 KLVIGDIS-EQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIERE---VEESVG 565
++ + E+ + E + +++ S D E S ND +S E +
Sbjct: 611 EIFTCPVCFEEQSSSNLEEINRHVDECLAGSLVEDTVEISKND--LSRENTFNFLSHCKN 668
Query: 566 KDIEESLKNVSDVLFNEKVENLTMEN 591
++I++ +NV+D L T EN
Sbjct: 669 ENIDDCKENVTDQLAGTGQSASTSEN 694
Score = 40 (19.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 48/255 (18%), Positives = 82/255 (32%)
Query: 797 ETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLA----DPIKDTEST 852
E + + LEE+ ++ GS+ + + ++D L+REN FL+ + I D +
Sbjct: 620 EEQSSSNLEEINRHVDECLAGSLVEDTVEISKND--LSRENTFNFLSHCKNENIDDCKEN 677
Query: 853 GPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGD----PNNEMCKSTVQF 908
+ T + + + +Q+ S K K+ GD P N K +
Sbjct: 678 VTDQLAGTGQSASTSENSSGNSRDKKFTQIVSE-KPHREKQPGDLIDIPRNASIKQCLSP 736
Query: 909 HSNSINKGN--GNADVSPMDTVDI-INTIADSSTVDSAINIADPTKIIC------DKCSQ 959
NS G D + + DS V N+ T + D C
Sbjct: 737 KRNSQENAVQFGRMDHTEETSSSCSFEAREDSVLVCPVCNLEQKTTSLMSFNRHVDVCLN 796
Query: 960 PIDINELQEHQDYHFALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPSKLNSFKN 1019
I EL E D G + ++ K
Sbjct: 797 KGLIQELTEKDD----CSAKTSDTENSIRVGGLSRGQKCTKPLQGTKRSGLTTSQSASKK 852
Query: 1020 SENFKKLKTIDQFFK 1034
+++ +TI+ FFK
Sbjct: 853 AKSIDSKRTIEMFFK 867
>UNIPROTKB|Q5Q9G7 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 HOVERGEN:HBG056846
EMBL:AY769930 IPI:IPI00965083 SMR:Q5Q9G7 STRING:Q5Q9G7
Ensembl:ENST00000509126 Uniprot:Q5Q9G7
Length = 489
Score = 244 (91.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 117/408 (28%), Positives = 175/408 (42%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV + + NY AR GV M G
Sbjct: 100 SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPG 154
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR +EV +L+++ S+DEAY+++T
Sbjct: 155 FIAKRLCPQLII--VPP-----NFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKH 207
Query: 123 VHERM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVM---EWLGQVYSDTD-- 172
+ ER K I G + E R + E V D
Sbjct: 208 LEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPF 267
Query: 173 -TSLME--NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ E N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 268 QVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 327
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 328 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 384
Query: 284 HFEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELAD 341
+T SW Y+ I+ G+ + KS+ + F + A Q L
Sbjct: 385 LLFSET-SWHYFLHISLGLGSTHLTRDGERKSMSVERTF-SEINKAEEQ------YSLCQ 436
Query: 342 EVCERLEDDLTLNKRRAQLLT-VSFTQETDGKVNSCSRSIALASYKLQ 388
E+C L DL K R ++ + F + G N + LA Y+L+
Sbjct: 437 ELCSELAQDL--QKERLKVFGYLVFPMKRTGNTN---KGALLAFYRLE 479
>UNIPROTKB|G3V8W7 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 EMBL:CH473955
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ UniGene:Rn.92419 Ensembl:ENSRNOT00000033952
Uniprot:G3V8W7
Length = 851
Score = 164 (62.8 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I +DMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LATSNYHARRFGVRAAMPGFIA 156
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP++ + VP + KYR +EV +L+E+ S+DEAY+++T + E
Sbjct: 157 KRLCPQLII--VPP-----NFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQE 209
Query: 126 R 126
R
Sbjct: 210 R 210
Score = 147 (56.8 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 66/240 (27%), Positives = 111/240 (46%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIK 248
+V+EIR + KT SAGIA N +LAK+ +KP Q I+P S M + +L I+
Sbjct: 292 VVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIR 351
Query: 249 KVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSH-FEEKTASWLYY--IARGIDHEPV 305
KV +G K+ ++++ L T EL + + L S F E +SW Y+ +A G+ +
Sbjct: 352 KVSGIG-KVTEKMLLALGIVTCTEL--YQQRALLSLLFSE--SSWHYFLHVALGLGSTDL 406
Query: 306 NARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSF 365
KS+ + F T + S L E+C L DL + + +T+
Sbjct: 407 ARDGERKSMSVERTF--SEINKTEEQYS-----LCQELCTELAHDLQKEGLKGRTVTIKL 459
Query: 366 TQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLFLGLSASKFS 425
+ D +V + + ++ A +DI V+ +++ +A L L +G+ S FS
Sbjct: 460 -KNVDFEVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLR--LRLMGVRMSTFS 516
Score = 44 (20.5 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 858 ISTES-NEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
IS E+ NE +D + S+S++S+M S + A S D + ++ + +G
Sbjct: 632 ISLEAFNEHVDAC-LDGPSTSENSEMPSYSHAS----SADIGQQAHRAVPLWEK----RG 682
Query: 917 NGNADVSPMDTVDIINT 933
+G+ +++ D D+ T
Sbjct: 683 HGDGEITSGDGADLTET 699
Score = 43 (20.2 bits), Expect = 6.6e-17, Sum P(4) = 6.6e-17
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 937 SSTVDSAINIADPTKIICDKC---SQPIDINELQEHQD 971
S + ++ N DP IC C + I + EH D
Sbjct: 605 SESFKTSENSNDPQTFICPVCFREQEGISLEAFNEHVD 642
Score = 41 (19.5 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 683 VKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRK-YETTRQSHLNKPKLFADFPTTSQ 741
VKP S + +K E P P I+ + + + S K K+ F T+
Sbjct: 555 VKPLETSRKKSFFDKKRSERIPNCQDPPRCKIAGEQALQASEPSQALK-KMSESFKTSEN 613
Query: 742 GNNPDT 747
N+P T
Sbjct: 614 SNDPQT 619
Score = 37 (18.1 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
GR +K ++ K ++ T+D FFK
Sbjct: 826 GRKTKGSTSKRTKPRDPRHTLDGFFK 851
Score = 37 (18.1 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 445 PMTSEHSSLPEQS 457
P TSE+S +P S
Sbjct: 648 PSTSENSEMPSYS 660
>UNIPROTKB|J3KSW2 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KSW2 Ensembl:ENST00000579434
Uniprot:J3KSW2
Length = 637
Score = 172 (65.6 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 103/450 (22%), Positives = 192/450 (42%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L++ L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 77 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGV 134
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q++L P+S ++++ IK++ +G K + +E L +++ +L+ FS K L+
Sbjct: 135 FKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTA-KCLEALGINSVRDLQTFSPKILEK 193
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
A + ++ G D+ PV +S F K C ++ + + I+EL +
Sbjct: 194 ELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSF--KKC-SSEVEAKNKIEELLASL 250
Query: 344 CERLEDDLTLNKRRAQLLTVSFTQETD-GKVN-SCS------RSIALASYKLQD-IVEVS 394
R+ D +L+ ++ E G+ + C + + +Y + +V++
Sbjct: 251 LNRVCQD-GRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDIL 309
Query: 395 MQVI-NKTNSAPPISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSL 453
M++ N N P + F L A + G I + P + +HS
Sbjct: 310 MKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGL---IDYYLMPSLSTTSRSGKHSFK 366
Query: 454 PEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVI 513
+ + D K +T +F L RIE ++ ES LD+ N + +K
Sbjct: 367 MKDTHMEDFPKDKETNRDF-------LPSGRIEST-----RTR-ESPLDTTNFSKEK--- 410
Query: 514 GDISE----QIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIE 569
DI+E + + V K L ++ S + E F K S+ + S G
Sbjct: 411 -DINEFPLCSLPEGVDQEVFKQLPVDIQEEILSGKSREKFQGK-GSVSCPLHASRGVLSF 468
Query: 570 ESLKNVSDVLFNEKVENLTMENKKSIKNEC 599
S K + D+ N + ++L+ + S + C
Sbjct: 469 FSKKQMQDIPINPR-DHLSSSKQVSSVSPC 497
Score = 125 (49.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L V G+ D+++YR +V +L EFS +VER DE ++DLT++V
Sbjct: 5 DAKEKCPQLVL-----VNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMV 58
Query: 124 HERMKSIGHIAASQLSNTFVVG 145
+R++ + + +LS V G
Sbjct: 59 EKRLQQL---QSDELSAVTVSG 77
>UNIPROTKB|F1NCT8 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 IPI:IPI00680917
Ensembl:ENSGALT00000032847 ArrayExpress:F1NCT8 Uniprot:F1NCT8
Length = 862
Score = 260 (96.6 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 158/625 (25%), Positives = 269/625 (43%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I IDMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP + + VP + KYR +EV +L+E+ +DEAY+++T+ + E
Sbjct: 158 KKLCPHLTI--VP-----LNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHLEE 210
Query: 126 RM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTE 180
R+ K + + +V ND + + E G D D+ + +
Sbjct: 211 RLNWPEDKRRYFLNTENTTEKRIVKKRSQVNDGYSSSPELFED-GTSVMDDDSG--QRDQ 267
Query: 181 DFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS-ILPQ 235
+ + + G V+EIR + KTQ SAGIA N +LAK+ +KP Q I P+
Sbjct: 268 SLKNVVVFGTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPE 327
Query: 236 -SSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSH-FEEKTASWL 293
+V +L I+KV +G K+ +++++ L T EL + + L S F E ASW
Sbjct: 328 RQAVLDFIKDLPIRKVPGIG-KVTEKMLKALGIVTCSEL--YQQRALLSLLFSE--ASWR 382
Query: 294 YY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDL 351
+ I+ G+ + KS+ + F ++ +D L E+C L DL
Sbjct: 383 SFLDISLGLGSTHLEKDGERKSMSTERTFSE---ISKAEDQ----YSLCQELCRELAQDL 435
Query: 352 TLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLT 411
+ + +T+ + + +V + + ++ L+S +D + +++ T I +
Sbjct: 436 QKEGLKGKTVTLKL-KNVNFEVKTRASTV-LSSVSTEDEIFAVAKMLLGTE----IDSVA 489
Query: 412 P-PL---LFLGLSASKF----SPLGSHPSIQQFFKPQ---DHP--EPMTSEHSSLPEQS- 457
P PL L +G+ S F SI+ F K D +P S +L + S
Sbjct: 490 PHPLRIRLMVGVRVSGFLSEEEKKYQQKSIKSFLKSGKELDFSRLQPGRSNQENLTKNSE 549
Query: 458 -TNHDS---KKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIE--SKL-DSCNANVDK 510
++ S KKR LN N P + ++ + + + +E +K+ D +NV +
Sbjct: 550 ASSRGSFFDKKRAARQLNSNNLFPNE-SVGKQHFHGVKSSANFVEEANKVTDLQKSNVCE 608
Query: 511 LVIGDIS-EQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIERE---VEESVGK 566
+ + E+ + E + +++ S D E S ND +S E + +
Sbjct: 609 IFTCPVCFEEQSSSNLEEINRHVDECLAGSLVEDTVEISKND--LSRENTFNFLSHCKNE 666
Query: 567 DIEESLKNVSDVLFNEKVENLTMEN 591
+I++ +NV+D L T EN
Sbjct: 667 NIDDCKENVTDQLAGTGQSASTSEN 691
Score = 37 (18.1 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
G + ++ K +++ +TI+ FFK
Sbjct: 837 GLTTSQSASKKAKSIDSKRTIEMFFK 862
>UNIPROTKB|D6RAE5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:CH471084
EMBL:AC010245 EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
HOGENOM:HOG000082711 UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424
IPI:IPI00966124 SMR:D6RAE5 Ensembl:ENST00000503479 Uniprot:D6RAE5
Length = 396
Score = 236 (88.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 109/380 (28%), Positives = 166/380 (43%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV + + NY AR GV M G
Sbjct: 34 SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPG 88
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR +EV +L+++ S+DEAY+++T
Sbjct: 89 FIAKRLCPQLII--VPP-----NFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKH 141
Query: 123 VHERM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVM---EWLGQVYSDTD-- 172
+ ER K I G + E R + E V D
Sbjct: 142 LEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPF 201
Query: 173 -TSLME--NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ E N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 202 QVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 261
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 262 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 318
Query: 284 HFEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELAD 341
+T SW Y+ I+ G+ + KS+ + F + ++ QEL
Sbjct: 319 LLFSET-SWHYFLHISLGLGSTHLTRDGERKSMSVERTFSE---INKAEEQYSLCQELCS 374
Query: 342 EVCERLEDDLTLNKRRAQLL 361
E+ + L+ + L K+ LL
Sbjct: 375 ELAQDLQKE-RLKKKYLPLL 393
>UNIPROTKB|Q5Q9G5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 EMBL:AY769932
IPI:IPI00967663 SMR:Q5Q9G5 STRING:Q5Q9G5 Ensembl:ENST00000504026
UCSC:uc003kee.3 HOVERGEN:HBG056846 Uniprot:Q5Q9G5
Length = 461
Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 111/384 (28%), Positives = 165/384 (42%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV + + NY AR GV M G
Sbjct: 100 SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPG 154
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR +EV +L+++ S+DEAY+++T
Sbjct: 155 FIAKRLCPQLII--VPP-----NFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKH 207
Query: 123 VHERM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVM---EWLGQVYSDTD-- 172
+ ER K I G + E R + E V D
Sbjct: 208 LEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPF 267
Query: 173 -TSLME--NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ E N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 268 QVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 327
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 328 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 384
Query: 284 HFEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELAD 341
+T SW Y+ I+ G+ + KS+ + F + A Q L
Sbjct: 385 LLFSET-SWHYFLHISLGLGSTHLTRDGERKSMSVERTF-SEINKAEEQ------YSLCQ 436
Query: 342 EVCERLEDDLTLNKRRAQLLTVSF 365
E+C L DL K R ++ V +
Sbjct: 437 ELCSELAQDL--QKERLKVAQVEY 458
>TIGR_CMR|CHY_1651 [details] [associations]
symbol:CHY_1651 "DNA polymerase IV - AMBIGUITY"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HOGENOM:HOG000082710 RefSeq:YP_360472.1
HSSP:P96022 ProteinModelPortal:Q3ABL2 STRING:Q3ABL2 GeneID:3726655
KEGG:chy:CHY_1651 PATRIC:21276423 OMA:GNREIFQ
ProtClustDB:CLSK2464724 BioCyc:CHYD246194:GJCN-1650-MONOMER
Uniprot:Q3ABL2
Length = 391
Score = 165 (63.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 42/120 (35%), Positives = 64/120 (53%)
Query: 1 MTSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHM 60
M R+I +DMD F+ VE + NP L GKP+ +V + G + A +YEAR GV M
Sbjct: 1 MKKRVIIHVDMDAFFAAVEQRDNPELKGKPV-IVGGVPGERGVVAAASYEARKFGVRSAM 59
Query: 61 RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
EA + CP +P + KY+ ++ + E++ +VE S+DEAY+D+T
Sbjct: 60 SLWEAARLCPHGIF--IPG-----NHKKYQEVSEKIFRIFREYTPLVEPVSLDEAYLDVT 112
Score = 120 (47.3 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKV 250
I ++I+ + +T+ S G+A NK LAKL ++KP + + +V A L ++ +
Sbjct: 124 IGKKIKKRIFEETELTASVGVAPNKFLAKLASEVNKPDGFCEVREDNVLDFLAPLPVEML 183
Query: 251 RHLGGK----LGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVN 306
+G K L D ++T+Q EL +F L++ + LYY++RGID V
Sbjct: 184 WGVGEKMKERLNDMGIKTVQ--DFWELPEFFLRKKFGVLGQN----LYYLSRGIDFREVI 237
Query: 307 ARLVSKSIG 315
V KS+G
Sbjct: 238 PERVPKSLG 246
>ASPGD|ASPL0000012133 [details] [associations]
symbol:AN3909 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017956 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 SMART:SM00384 InterPro:IPR001357 GO:GO:0000287
GO:GO:0003684 GO:GO:0006281 EMBL:BN001302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AACD01000064 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 InterPro:IPR025527 Pfam:PF14377 KO:K03515
OrthoDB:EOG49PF6V RefSeq:XP_661513.1 ProteinModelPortal:Q5B6C1
STRING:Q5B6C1 EnsemblFungi:CADANIAT00004788 GeneID:2873330
KEGG:ani:AN3909.2 HOGENOM:HOG000216225 OMA:SAEVNWG Uniprot:Q5B6C1
Length = 1139
Score = 165 (63.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 43/128 (33%), Positives = 61/128 (47%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +D DCF+ V +P L GKP+A+ + T G I + NY AR GV M
Sbjct: 340 RYIMHVDFDCFFAAVSTLKHPELEGKPVAIA-HGTGTGSEIASCNYVARASGVKNGMWMK 398
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
A Q CP++ + +P D Y A R+ + +V+ SIDEA +D+T +
Sbjct: 399 GALQACPDLRV--LPY-----DFPAYEEASRKFYRAILGIDGLVQSVSIDEALVDITTIC 451
Query: 124 HERMKSIG 131
E S G
Sbjct: 452 LEAGGSEG 459
Score = 133 (51.9 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 84/345 (24%), Positives = 143/345 (41%)
Query: 182 FQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSML 241
++E A A + E++RAA+ +T S GI N + AK+ KP Q L +V
Sbjct: 468 YREQAKADEVAEQLRAAIKRETGCAVSVGIGGNILQAKVALRKAKPAGQFQLKPDAVLDF 527
Query: 242 YANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGID 301
L ++ + +G L ++ E L + ++ S ++L S KT + L ARGID
Sbjct: 528 IGELPVQNLPGVGYSLSAKL-EDLGVKIVKDIRDLSREKLSSSLGPKTGAKLADYARGID 586
Query: 302 HEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDL------TLN- 354
V + KS+ + + T+ +++ L +E+ RL ++L TL
Sbjct: 587 RTEVGNEVTRKSVSAEVNWGIR--FVTQDQAEDFMRSLCEELHRRLVENLMKGQQLTLKV 644
Query: 355 KRRAQLLTVSFTQETD-GKVNSCSRSIALA-SYKLQDIVEVSMQVINKTNSAPPISDLTP 412
RRA + + GK + ++S+ L + D++ + ++ + P DL
Sbjct: 645 MRRALDAPLEAVKHLGHGKCDVFNKSVILGIATNAADVLGKEAIAMLRSLAISP-GDLRG 703
Query: 413 PLLFLGLSASKFSPLGSHP-----SIQQF-FK---------PQDHPEPMTSEHSSLPEQS 457
LG+ +K PL S S QQ FK P D P+ + S E S
Sbjct: 704 ----LGVQMTKLEPLKSTSEKSDGSQQQLAFKASTAPKRAQPIDDPDLLDSPRKGESE-S 758
Query: 458 TNHDSKKRDKTLLNFNQQ-TPFQLALNRIERKLIDKFKSHIESKL 501
H + D T N T F + ++ + ++ + I SKL
Sbjct: 759 IRHGPQLNDTTQKLLNTSGTQFIMP-SQPDPAVVAELPDDIRSKL 802
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 425 SPLGSHPSIQQ----FFKPQDHPEPMTSEHSSLPE 455
SP+G P+++Q PQ +P T + LPE
Sbjct: 816 SPMGPGPAVRQQPAPALPPQSQLDPETL--AELPE 848
>UNIPROTKB|A6QNV6 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ OrthoDB:EOG4Z8XVV
EMBL:DAAA02027742 EMBL:DAAA02027743 EMBL:BC149024 IPI:IPI00867010
RefSeq:NP_001095728.1 UniGene:Bt.38144 SMR:A6QNV6 STRING:A6QNV6
Ensembl:ENSBTAT00000005265 GeneID:541218 KEGG:bta:541218
InParanoid:A6QNV6 NextBio:20879073 Uniprot:A6QNV6
Length = 877
Score = 236 (88.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 115/445 (25%), Positives = 195/445 (43%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I IDMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 110 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 164
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP++ + VP + KY+ REV +L+++ S+DEAY+++T + E
Sbjct: 165 KRLCPQLII--VPP-----NFDKYQAVSREVKEILTDYDPNFMAMSLDEAYLNITKHLEE 217
Query: 126 RM------KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQ-----VYSDTDTS 174
R + A + L N G + N+ + + L + + S + S
Sbjct: 218 RKNWPEDKRKYFITAGNSLENDKP---GKEVNELSEHEGSISPLLFEDSPPDLQSPGNPS 274
Query: 175 LME-----NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 275 QVNFEEPNNPQIHQNSIVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 334
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 335 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 391
Query: 284 HFEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELAD 341
+T SW ++ I+ G+ + KS+ + F + A Q L
Sbjct: 392 LLFSET-SWHHFLHISLGLGSTHLARDGERKSMSVERTF-SEISKAEEQ------YSLCQ 443
Query: 342 EVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKT 401
E+C L DL + + +T+ + + +V + + +++ ++I ++ +++
Sbjct: 444 ELCSELAQDLQKKGLKGRTVTIKL-KNVNFEVKTRASTVSTVVSTAEEIFVIAKELLRTE 502
Query: 402 NSAPPISDLTPPLLF--LGLSASKF 424
A D PL +G+ S F
Sbjct: 503 IDA----DFPQPLRLRLMGVRLSGF 523
Score = 56 (24.8 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 794 PSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLA-DPIKDTEST 852
PS+ N+ SS E + ++ ++++ + + NT+ + DPI+ E+T
Sbjct: 657 PSISGNSKMSSCSHASSTEVNEKENV-CDSVSLCEKQGYETHQKNTEITSVDPIELVETT 715
Query: 853 G-PSNVISTE--SNEVIDQTKIRDVSS 876
G PSN T SN+ ++ + +SS
Sbjct: 716 GKPSNTEDTSALSNKPSEEEECSGLSS 742
Score = 56 (24.8 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 858 ISTES-NEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
+S E+ N+ +D + S S +S+M+S + A E + N +C S
Sbjct: 641 VSLEAFNKHVDAC-LDGPSISGNSKMSSCSHASST-EVNEKEN-VCDSVSLCEKQGYETH 697
Query: 917 NGNADVSPMDTVDIINTIAD-SSTVDSAINIADPTKIICDKCS 958
N +++ +D ++++ T S+T D++ P++ ++CS
Sbjct: 698 QKNTEITSVDPIELVETTGKPSNTEDTSALSNKPSEE--EECS 738
Score = 52 (23.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 562 ESVGKDIEESLK-NVSDVLFNEKV-ENLTMENKKSIKNECLSPVSSKSK-DLTNENLG-H 617
E+V K +SL+ + S + N+K+ ENL E K PV + + ++ E H
Sbjct: 593 ETVNK---QSLQTSQSFQVLNKKMSENLETEEKSHSCQTFTCPVCFREQGSVSLEAFNKH 649
Query: 618 TFETLPSPILTSDRDI----H-TSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNS 672
L P ++ + + H +ST K +NV ++ +L K+ ++ NT S
Sbjct: 650 VDACLDGPSISGNSKMSSCSHASSTEVNEK--ENVCDSVSLCEKQGYETHQK--NTEITS 705
Query: 673 FEFITYTRRQVKPENISNGNNSDNKTDDED 702
+ I KP N + + NK +E+
Sbjct: 706 VDPIELVETTGKPSNTEDTSALSNKPSEEE 735
>UNIPROTKB|F1S2I2 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03511 CTD:51426 OMA:TCTELYQ EMBL:CU466449 RefSeq:XP_003123756.1
Ensembl:ENSSSCT00000015383 GeneID:100518650 KEGG:ssc:100518650
Uniprot:F1S2I2
Length = 878
Score = 160 (61.4 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 45/124 (36%), Positives = 62/124 (50%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV N + NY AR GV M G
Sbjct: 107 SNTIVHIDMDAFYAAVEMRDNPELRDKPIAVGSRNM-----LSTSNYHARKFGVRGAMPG 161
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR EV + +++ S+DEAY+++T
Sbjct: 162 FIAKRLCPQLII--VPP-----NFDKYRAVSSEVKEIFADYDPNFMALSLDEAYLNITKH 214
Query: 123 VHER 126
+ ER
Sbjct: 215 LEER 218
Score = 143 (55.4 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 106/473 (22%), Positives = 196/473 (41%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIK 248
+V+EIR + KT SAGIA N +LAK+ +KP Q ILP V M + +L I+
Sbjct: 300 VVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQVVMDFIKDLPIR 359
Query: 249 KVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYY--IARGIDHEPVN 306
KV +G K+ +++++ L T +L + + L S +T SW Y+ I+ G+ +
Sbjct: 360 KVSGIG-KVTEKMLKALGIITCTDL--YQQRALLSLLFSET-SWHYFLHISLGLGSTCLP 415
Query: 307 ARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFT 366
KS+ + F + A Q L E+C L DL + + +T+
Sbjct: 416 RDGERKSMSVERTF-SEINKAEEQ------YSLCQELCSELAQDLQKEGLKGRTVTLKL- 467
Query: 367 QETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLFLGLSASKFSP 426
+ D +V + + ++ ++I ++ +++ A L L+ + LS+
Sbjct: 468 KNVDFEVKTRASTVLSVISTAEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEE 527
Query: 427 LGSHP--SIQQFFKPQDHPEPMT------SEHSSLPEQ-STNH-----DSKKRDKTLLN- 471
H SI F +P + T ++ P+ +H D K+ ++ L +
Sbjct: 528 EKKHQQRSIIGFLQPGNQTLSATGCMLEKTDKDQFPKPLEMSHKKSFFDKKRSERKLSHQ 587
Query: 472 --FNQQTPFQLALNRIER-KLIDKFKS-HIESKLDSCNANVDKLVIGDISEQIKNIAAEN 527
F + + +L + +++ K +S ++E+ +S N V + EQ +I E
Sbjct: 588 DTFKSEIVDRQSLPTSQSFQVLKKKRSENLETLENSDNGQVFTCPVC-FREQ-GSIGLEA 645
Query: 528 VRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENL 587
K++ + S + S S E +E V I SL D ++K +
Sbjct: 646 FNKHVDACLDGPSVSGNSKMSSCSHASSTEANQKEHVHDSI--SLFEKQDYRTHQKNTEI 703
Query: 588 TMENKKSIKNECLSPVSSKSKDLT-NENLGHTFETLPSPILTSDRDIHTSTPC 639
T + + +P +++ D + N++ LPS L + H PC
Sbjct: 704 TSVDSVELVETVSNPSNAEGVDASSNKHSEEECSNLPSKSLHMEH--HPQNPC 754
Score = 59 (25.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 35/172 (20%), Positives = 69/172 (40%)
Query: 808 TSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGP-----SNVISTES 862
T E VD S+ T+ ++ + R N + L + T P I E+
Sbjct: 589 TFKSEIVDRQSLPTSQSFQV---LKKKRSENLETLENSDNGQVFTCPVCFREQGSIGLEA 645
Query: 863 -NEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNAD 921
N+ +D + S S +S+M+S + A + + S F N +
Sbjct: 646 FNKHVDAC-LDGPSVSGNSKMSSCSHAS--STEANQKEHVHDSISLFEKQDYRTHQKNTE 702
Query: 922 VSPMDTVDIINTIADSSTVDSAINIADPTKIICDKCSQPIDINELQEHQDYH 973
++ +D+V+++ T+++ S + A K ++CS + L H ++H
Sbjct: 703 ITSVDSVELVETVSNPSNAEGVD--ASSNKHSEEECSN-LPSKSL--HMEHH 749
Score = 49 (22.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 41/180 (22%), Positives = 80/180 (44%)
Query: 546 EESFNDKLVSIEREV--EESVGKDI--EESLKNVSD--VLFNEKVENL-TMENKKSIKNE 598
++SF DK S ER++ +++ +I +SL VL ++ ENL T+EN +
Sbjct: 571 KKSFFDKKRS-ERKLSHQDTFKSEIVDRQSLPTSQSFQVLKKKRSENLETLENSDN-GQV 628
Query: 599 CLSPVSSKSK-DLTNENLG-HTFETLPSPILTSDRDI----H-TSTPCRRKGSKNVFENK 651
PV + + + E H L P ++ + + H +ST +K ++V ++
Sbjct: 629 FTCPVCFREQGSIGLEAFNKHVDACLDGPSVSGNSKMSSCSHASSTEANQK--EHVHDSI 686
Query: 652 TLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPI 711
+L K++ ++ NT S + + P N + S NK +E+ + +K +
Sbjct: 687 SLFEKQDYRTHQK--NTEITSVDSVELVETVSNPSNAEGVDASSNKHSEEECSNLPSKSL 744
Score = 37 (18.1 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
G +K ++ K +++ TID FFK
Sbjct: 853 GLMTKYSASKKTKSNNPRHTIDIFFK 878
>UNIPROTKB|F1NCT7 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
EMBL:AADN02067159 EMBL:AADN02067160 EMBL:AADN02067161
IPI:IPI00680100 Ensembl:ENSGALT00000032848 ArrayExpress:F1NCT7
Uniprot:F1NCT7
Length = 543
Score = 245 (91.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 113/422 (26%), Positives = 194/422 (45%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I IDMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP + + VP + KYR +EV +L+E+ +DEAY+++T+ + E
Sbjct: 158 KKLCPHLTI--VP-----LNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHLEE 210
Query: 126 RM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTE 180
R+ K + + + F + + K G +++ D TS+M++
Sbjct: 211 RLNWPEDKRRYFLNTENTTEKIYLQF-TEYETKVMPKYGYSS-SPELFED-GTSVMDDDS 267
Query: 181 DFQELAIAGVIV---------EEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
++ ++ V+V +EIR + KTQ SAGIA N +LAK+ +KP Q
Sbjct: 268 GQRDQSLKNVVVFGTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQC 327
Query: 232 -ILPQ-SSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSH-FEEK 288
I P+ +V +L I+KV +G K+ +++++ L T EL + + L S F E
Sbjct: 328 RISPERQAVLDFIKDLPIRKVPGIG-KVTEKMLKALGIVTCSEL--YQQRALLSLLFSE- 383
Query: 289 TASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCER 346
ASW + I+ G+ + KS+ + F ++ +D L E+C
Sbjct: 384 -ASWRSFLDISLGLGSTHLEKDGERKSMSTERTFSE---ISKAEDQ----YSLCQELCRE 435
Query: 347 LEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQD-IVEVSMQVIN-KTNSA 404
L DL + + +T+ + + +V + + ++ L+S +D I V+ ++ + +S
Sbjct: 436 LAQDLQKEGLKGKTVTLKL-KNVNFEVKTRASTV-LSSVSTEDEIFAVAKMLLGTEIDSV 493
Query: 405 PP 406
P
Sbjct: 494 AP 495
Score = 37 (18.1 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
G + ++ K +++ +TI+ FFK
Sbjct: 518 GLTTSQSASKKAKSIDSKRTIEMFFK 543
>UNIPROTKB|J3QR36 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000577612 Uniprot:J3QR36
Length = 195
Score = 162 (62.1 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 44 IIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEF 103
++ NYEAR GV + M +AK+ CP++ L V G+ D+++YR +V +L EF
Sbjct: 45 VVTCNYEARKLGVKKLMNVRDAKEKCPQLVL-----VNGE-DLTRYREMSYKVTELLEEF 98
Query: 104 SNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG 145
S +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 99 SPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSG 137
Score = 77 (32.2 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L++ L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 137 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGV 194
>UNIPROTKB|D6R9M8 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:AC010245 EMBL:AC116341 GO:GO:0003887
InterPro:IPR024728 Pfam:PF11798 HOGENOM:HOG000082711 HGNC:HGNC:9183
EMBL:AC026424 IPI:IPI00967979 ProteinModelPortal:D6R9M8 SMR:D6R9M8
Ensembl:ENST00000514141 UCSC:uc003kea.3 ArrayExpress:D6R9M8
Bgee:D6R9M8 Uniprot:D6R9M8
Length = 427
Score = 230 (86.0 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 95/313 (30%), Positives = 140/313 (44%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S I IDMD FY VE + NP L KP+AV + + NY AR GV M G
Sbjct: 100 SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPG 154
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
AK+ CP++ + VP + KYR +EV +L+++ S+DEAY+++T
Sbjct: 155 FIAKRLCPQLII--VPP-----NFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKH 207
Query: 123 VHERM-----KSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVM---EWLGQVYSDTD-- 172
+ ER K I G + E R + E V D
Sbjct: 208 LEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPF 267
Query: 173 -TSLME--NTEDFQELAIAGV----IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLH 225
+ E N + Q + G +V+EIR + KT SAGIA N +LAK+ +
Sbjct: 268 QVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKN 327
Query: 226 KPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP Q ILP M + +L I+KV +G K+ +++++ L T EL + + L S
Sbjct: 328 KPNGQYQILPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLS 384
Query: 284 HFEEKTASWLYYI 296
+T SW Y++
Sbjct: 385 LLFSET-SWHYFL 396
>MGI|MGI:1347081 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1347081 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201
HOGENOM:HOG000234325 HOVERGEN:HBG053634 KO:K03510 OrthoDB:EOG46T310
EMBL:AF151691 EMBL:AY515316 EMBL:AY515317 EMBL:BC082278
IPI:IPI00553425 IPI:IPI00985545 RefSeq:NP_001129562.1
UniGene:Mm.244352 PDB:2KWU PDB:2KWV PDB:3AI4 PDBsum:2KWU
PDBsum:2KWV PDBsum:3AI4 ProteinModelPortal:Q6R3M4 SMR:Q6R3M4
IntAct:Q6R3M4 STRING:Q6R3M4 PhosphoSite:Q6R3M4 PRIDE:Q6R3M4
Ensembl:ENSMUST00000043286 Ensembl:ENSMUST00000161542 GeneID:26447
KEGG:mmu:26447 UCSC:uc008foi.2 UCSC:uc008fok.2 InParanoid:Q6R3M4
BindingDB:Q6R3M4 ChEMBL:CHEMBL5159 NextBio:304545 Bgee:Q6R3M4
CleanEx:MM_POLI Genevestigator:Q6R3M4 GermOnline:ENSMUSG00000038425
Uniprot:Q6R3M4
Length = 717
Score = 235 (87.8 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 66/203 (32%), Positives = 106/203 (52%)
Query: 2 TSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMR 61
+SR+I +D+DCFY QVE NP L +PL V Q ++ NYEAR GV + M
Sbjct: 26 SSRVIVHVDLDCFYAQVEMISNPELKDRPLGVQQKYL-----VVTCNYEARKLGVRKLMN 80
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+AK+ CP++ L V G+ D+S+YR +V +L EFS VER DE ++DLT+
Sbjct: 81 VRDAKEKCPQLVL-----VNGE-DLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTE 134
Query: 122 VVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTED 181
+V +R++ + + ++ + V FG N++ +M V S + E
Sbjct: 135 MVEKRLQQL---PSEEVPSVTV--FGHVYNNQSVNLHNIMHRRLVVGSQIAAEMREAM-- 187
Query: 182 FQELAI---AGVIVEEIRAAVLS 201
+ +L + AGV ++ A ++S
Sbjct: 188 YNQLGLTGCAGVAPNKLLAKLVS 210
Score = 167 (63.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 62/247 (25%), Positives = 115/247 (46%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L N + L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 155 GHVYNNQSVNL-HNIMH-RRLVVGSQIAAEMREAMYNQLGLTGCAGVAPNKLLAKLVSGV 212
Query: 225 HKPQKQSIL-PQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQS 283
KP +Q++L P+S ++++ IK++ +G K + E L +++ +L+ F +K L+
Sbjct: 213 FKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKRL-EVLGINSVHDLQTFPIKTLEK 271
Query: 284 HFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEV 343
A + ++ G D PV +S F K C ++ + I+EL +
Sbjct: 272 ELGIAIAQRIQQLSFGEDKSPVTPSGPPQSFSEEDTF--KKC-SSEVEAKAKIEELLSSL 328
Query: 344 CERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNS 403
R+ D R+ + + + +D N SR + S+ +Q + +S
Sbjct: 329 LTRVCQD----GRKPHTVRLVIRRYSDKHCNRESRQCPIPSHVIQKLGT------GNHDS 378
Query: 404 APPISDL 410
PP+ D+
Sbjct: 379 MPPLIDI 385
>ASPGD|ASPL0000030996 [details] [associations]
symbol:AN5620 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] InterPro:IPR001126 InterPro:IPR003583
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00278 GO:GO:0003684 GO:GO:0006281
EMBL:AACD01000098 EMBL:BN001305 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 KO:K03510 RefSeq:XP_663224.1
EnsemblFungi:CADANIAT00003450 GeneID:2871907 KEGG:ani:AN5620.2
HOGENOM:HOG000191154 OMA:EAKQICP OrthoDB:EOG41CB4X Uniprot:Q5B1G0
Length = 573
Score = 228 (85.3 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 81/296 (27%), Positives = 145/296 (48%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
RII D DCFY V P L PLAV Q ++ NYEAR +G+ +
Sbjct: 11 RIILHFDYDCFYASVFEAEQPILKTLPLAVQQKQI-----VVTCNYEARRRGLRKLQLIK 65
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVL--SEFSNIVERASIDEAYIDLTD 121
EAKQ CP++ + + G+ D++K+R+A +++ S + VER DE ++D+TD
Sbjct: 66 EAKQICPDVVI-----ILGE-DLTKFRDASKDLYLFFRRSIWGERVERLGFDEIFMDVTD 119
Query: 122 VVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKA-GVMEWLGQVYSDTDTS--LME- 177
++ + G + + L+++F F D+ D A G+ Y + + L E
Sbjct: 120 MI---TYNAGLLNPNDLTHSF---FHLDSRDPTVGFAFDATAVYGRTYPNDRSGKPLSEA 173
Query: 178 NTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSIL--PQ 235
+T+ L +A +R+ + ++ + +AGI+ +K+LAK+V HKP Q+ L P
Sbjct: 174 DTQLHLRLLLASHFAGYLRSQLENQKGYTATAGISTSKLLAKVVGSAHKPNNQTTLLPPY 233
Query: 236 SSVSMLYANL-------SIKKVRHLGGKLGDEVVETLQCSTMLELE-KFSLKQLQS 283
SS +N+ I+ + +G KL +++ + S +E K +++ +++
Sbjct: 234 SSTGDCESNVLRFLDSREIRAIPGIGSKLSRKLISHITASDQSAVENKVTIRDVRA 289
>UNIPROTKB|J3KRG0 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000580880 Uniprot:J3KRG0
Length = 145
Score = 125 (49.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
+AK+ CP++ L V G+ D+++YR +V +L EFS +VER DE ++DLT++V
Sbjct: 5 DAKEKCPQLVL-----VNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMV 58
Query: 124 HERMKSIGHIAASQLSNTFVVG 145
+R++ + + +LS V G
Sbjct: 59 EKRLQQL---QSDELSAVTVSG 77
Score = 102 (41.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 165 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGL 224
G VY++ +L++ L + I E+R A+ ++ AG+A NK+LAKLV G+
Sbjct: 77 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGV 134
Query: 225 HKPQKQSIL 233
KP +Q++L
Sbjct: 135 FKPNQQTVL 143
>ZFIN|ZDB-GENE-060526-137 [details] [associations]
symbol:polk "polymerase (DNA directed) kappa"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 ZFIN:ZDB-GENE-060526-137 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOVERGEN:HBG101212 OrthoDB:EOG4Z8XVV
EMBL:BX294131 IPI:IPI00806343 UniGene:Dr.86433 SMR:B0S5R3
Ensembl:ENSDART00000141039 OMA:FISTEDK Uniprot:B0S5R3
Length = 875
Score = 162 (62.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 43/123 (34%), Positives = 64/123 (52%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R+I +DMD FY VE + P L KP+AV + + NY AR GV M G
Sbjct: 101 RVIVHVDMDAFYAAVEMRDCPELKDKPMAVGSMSM-----LSTSNYHARRFGVRAAMPGF 155
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVV 123
AK+ CP++ + VP+ + KYR +V + SE+ S+DEAY+D+T+ +
Sbjct: 156 IAKKLCPDLVI--VPT-----NFDKYRAVSAQVREIFSEYDPNFMPMSLDEAYLDITEHL 208
Query: 124 HER 126
+R
Sbjct: 209 EQR 211
Score = 119 (46.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 103/471 (21%), Positives = 182/471 (38%)
Query: 192 VEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIKK 249
V E+R + KT SAGIA N +LAK+ +KP Q I P+ V M + +L ++K
Sbjct: 245 VREMRFRIEQKTSLTASAGIAPNMMLAKVCSDKNKPNGQYRIPPERQVVMDFMKDLPVRK 304
Query: 250 VRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARL 309
V +G K+ ++++ L T +L + + L F E + +I+ G+ +
Sbjct: 305 VSGVG-KVTEKMLAALGIVTCSQLGQ-QMALLSLLFSETSWHHFLHISLGLGSTYMERDS 362
Query: 310 VSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQET 369
KS+ + F G+ A Q L E+C L DL + + +T+ +
Sbjct: 363 ERKSMSTERTF-GEMSDAGEQ------YSLCKELCHDLAQDLQREGLKGKTVTLKL-KNV 414
Query: 370 DGKVNSCSRSIALASYKLQDIVEVSMQVIN-KTNSAPPISDLTPPLLFLGLSASKFSPLG 428
+V + + ++ A ++I + ++ + +S P L L +G+ S F
Sbjct: 415 KFEVKTKAFTLQYAVCTEEEIFAAAKDLLKVEIDSVSP-QPLK--LRLMGVRVSGFISTE 471
Query: 429 SHPSIQQF---FKPQDHPEP--MTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALN 483
+Q+ F + P+P T S P+ D + K Q T ++
Sbjct: 472 DKKPLQKSIMGFLQKGGPDPAGFTQCPGSEPKAEEASDGARFLKP-----QSTEMKVPKP 526
Query: 484 RIERKLIDKFKSHIESK-LDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNAS 542
+ ++ F +SK L + D + ++ N +TH S +
Sbjct: 527 QAPQQ--QSFFQRAQSKRLQQQQEQTSASTVTDKTNNTQSDTTNNTAA--KTHVNHSQSD 582
Query: 543 DEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNE-KVENLTMENKKSIKNECLS 601
N +S + + + + L V E K NLT N+ +ECL
Sbjct: 583 TTSANKMNTGYISKLAKASFKISTQVLQCL--TCPVCNKEMKDVNLTAFNQHI--DECLK 638
Query: 602 PVSSKSKDLTNENLGHTFETL---PSPILTSDRDIHTSTPCRRKGSKNVFE 649
+ S + T+ + E L PS L S +H S+ K S + E
Sbjct: 639 GSAMDSNEHTDLSAAERQEELSGEPSS-LESKTLVHYSSCNEEKASTSTSE 688
Score = 45 (20.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 22/114 (19%), Positives = 47/114 (41%)
Query: 858 ISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGN 917
+S E + + +T + S ++ TS ++ GD N+ T QF + IN+ +
Sbjct: 659 LSGEPSSLESKTLVHYSSCNEEKASTSTSEP---MADGDDGNDF--KTPQFSQSMINRNH 713
Query: 918 GNA--DVSPMDTVDIINTIADSSTVDSAINIADPTK---IICDKCSQPIDINEL 966
+ + + + A S + ++ K ++C C+QP ++L
Sbjct: 714 SVVLKKQTSLSESKVRSYEASHSAHNPVPEMSCDLKGSSLVCPVCNQPQSTDDL 767
Score = 39 (18.8 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 706 VITKPIGSIS---MRKYETTRQSHLNKPKLFADFPTTS 740
V+ K S+S +R YE + +H P++ D +S
Sbjct: 715 VVLKKQTSLSESKVRSYEASHSAHNPVPEMSCDLKGSS 752
>UNIPROTKB|F1P5H4 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0017125 "deoxycytidyl
transferase activity" evidence=IEA] [GO:0042276 "error-prone
translesion synthesis" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:AADN02017696 EMBL:AADN02017697 IPI:IPI01017381
Ensembl:ENSGALT00000027069 Uniprot:F1P5H4
Length = 1255
Score = 127 (49.8 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 42/178 (23%), Positives = 77/178 (43%)
Query: 172 DTSLMENTEDFQELAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D +L++ TE E + + IR + ++T+ S G+ N +LA++ KP Q
Sbjct: 581 DEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAKPDGQ 640
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
L V + + +G + ++ +L T +L+ S+ +LQ F KT
Sbjct: 641 YHLKPEEVDDFIRGQLVTNLPGVGRSMESKLA-SLGIRTCGDLQCASMSKLQKEFGPKTG 699
Query: 291 SWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLE 348
LY RG+D PV KS+ + + ++ ++ L++E+ RLE
Sbjct: 700 QMLYRFCRGLDDRPVRTEKERKSVSAEINYGIR--FTQPKEAEAFLLSLSEEIQRRLE 755
Score = 108 (43.1 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 44 IIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEF 103
I + +YEAR G+ M +AK+ CP ++ D + Y+ + V +L+ +
Sbjct: 519 IASCSYEARQAGIKNGMFFGQAKKLCPNLQAVSY-------DFNAYKEVAQTVYEILASY 571
Query: 104 SNIVERASIDEAYIDLTDVVHE 125
++ +E S DEA +D+T+++ E
Sbjct: 572 THNIEAVSCDEALVDITEILTE 593
Score = 75 (31.5 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAV 33
+DMDCF+ V + P L GKP+AV
Sbjct: 426 VDMDCFFVSVAIRNRPDLKGKPVAV 450
Score = 66 (28.3 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 24/129 (18%), Positives = 58/129 (44%)
Query: 501 LDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREV 560
++ CN + +G + Q+ + N + + + S D E F ++ E+
Sbjct: 984 INGCNTALLSQPVGTVLLQVPELQEPNANMGINVIALPA-FSQVDPEVFAALPAELQAEL 1042
Query: 561 EESVGKDIEESLKNVSDVLFNE----KVENLTMENKKSI-KNECLSPVSSKSKDLTNENL 615
+++ + ++ + ++ ++ ++++ T +NKK I K +SPV L N+ L
Sbjct: 1043 KDAYDQRQKQPEQQPANAFVSKNPCLQLKHATTKNKKKIRKKNPVSPVKKIQSPLKNKLL 1102
Query: 616 GHTFETLPS 624
G + +P+
Sbjct: 1103 GSPAKIMPA 1111
Score = 56 (24.8 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 56/254 (22%), Positives = 105/254 (41%)
Query: 338 ELADEVCERLEDDLTLNKRRAQLLTVSFTQET--DGK---VNSCSRSIALASYKLQDIVE 392
+L V E L DL ++ Q+ T+ ET D K +N C+ AL S Q +
Sbjct: 947 QLDKSVLEALPPDL--REQVEQIYTIQ-QGETYGDSKREPINGCNT--ALLS---QPVGT 998
Query: 393 VSMQV--INKTNSAPPISDLTPPLLFLGLSASKFSPLGSHPSIQ---QFFKPQDHPE--P 445
V +QV + + N+ I+ + P F + F+ L + + + + Q PE P
Sbjct: 999 VLLQVPELQEPNANMGINVIALPA-FSQVDPEVFAALPAELQAELKDAYDQRQKQPEQQP 1057
Query: 446 MTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCN 505
+ S P H + K K + N +P + +I+ L +K + + +
Sbjct: 1058 ANAFVSKNPCLQLKHATTKNKKKIRKKNPVSP----VKKIQSPLKNKLLGSPAKIMPAAS 1113
Query: 506 ANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDE-ESFNDKLVSIEREVE-ES 563
+ KL+ G + ++ AA+ + + D +A ++ SF + ++ VE
Sbjct: 1114 GSPQKLIDGFLKQE--GAAAQLEAVPSTSDASDPSALQTEQCGSFRPQAPNLAGAVEFND 1171
Query: 564 VGKDIEESLKNVSD 577
V ++E + +SD
Sbjct: 1172 VKTLLKEWITTISD 1185
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 635 TSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPN 671
+ PC + K ++ K + VK++ + + N
Sbjct: 1063 SKNPCLQLKHATTKNKKKIRKKNPVSPVKKIQSPLKN 1099
>UNIPROTKB|Q9KPS5 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT ProtClustDB:PRK02406
PIR:G82093 RefSeq:NP_231918.1 ProteinModelPortal:Q9KPS5
DNASU:2613209 GeneID:2613209 KEGG:vch:VC2287 PATRIC:20083613
Uniprot:Q9KPS5
Length = 360
Score = 159 (61.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 39/119 (32%), Positives = 70/119 (58%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV-NYEARHKGVTRHMRG 62
R I +DMDCF+ VE + NP+ LAV + K G+I+ NY+AR GV M
Sbjct: 6 RKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHE--KQRGVISTCNYQARKFGVRSAMPT 63
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+A + CP++ + VP G+ +S Y++ +++ + +++++E S+DEAY+D+++
Sbjct: 64 AQALKLCPQLHV--VP---GR--MSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSE 115
Score = 104 (41.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 44/177 (24%), Positives = 78/177 (44%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D + ++ +E A +I + IR + + SAG+A K LAK+ L+KP
Sbjct: 107 DEAYLDVSESTAYQGSATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLY 166
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
++ V + +L ++K+ +G K+ E + ++ + ++L F AS
Sbjct: 167 VVTPDKVQEMVDSLPLEKIPGVG-KVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGAS 225
Query: 292 WLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWI-QELADEVCERL 347
L+ + GID V KS+G F ++T Q+ I Q+L E+ RL
Sbjct: 226 -LWKKSHGIDEREVVTERERKSVGVEYTFSQN--ISTFQECWQVIEQKLYPELDARL 279
>TIGR_CMR|VC_2287 [details] [associations]
symbol:VC_2287 "DNA-damage-inducible protein P" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT
ProtClustDB:PRK02406 PIR:G82093 RefSeq:NP_231918.1
ProteinModelPortal:Q9KPS5 DNASU:2613209 GeneID:2613209
KEGG:vch:VC2287 PATRIC:20083613 Uniprot:Q9KPS5
Length = 360
Score = 159 (61.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 39/119 (32%), Positives = 70/119 (58%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV-NYEARHKGVTRHMRG 62
R I +DMDCF+ VE + NP+ LAV + K G+I+ NY+AR GV M
Sbjct: 6 RKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHE--KQRGVISTCNYQARKFGVRSAMPT 63
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+A + CP++ + VP G+ +S Y++ +++ + +++++E S+DEAY+D+++
Sbjct: 64 AQALKLCPQLHV--VP---GR--MSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSE 115
Score = 104 (41.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 44/177 (24%), Positives = 78/177 (44%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D + ++ +E A +I + IR + + SAG+A K LAK+ L+KP
Sbjct: 107 DEAYLDVSESTAYQGSATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLY 166
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
++ V + +L ++K+ +G K+ E + ++ + ++L F AS
Sbjct: 167 VVTPDKVQEMVDSLPLEKIPGVG-KVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGAS 225
Query: 292 WLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWI-QELADEVCERL 347
L+ + GID V KS+G F ++T Q+ I Q+L E+ RL
Sbjct: 226 -LWKKSHGIDEREVVTERERKSVGVEYTFSQN--ISTFQECWQVIEQKLYPELDARL 279
>TAIR|locus:2156319 [details] [associations]
symbol:REV1 species:3702 "Arabidopsis thaliana"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0010224 "response to UV-B"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0010224 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AB016874 EMBL:AC002342
EMBL:AB187523 EMBL:EF016093 EMBL:EF016094 EMBL:EF016095
EMBL:EF016096 EMBL:EF016097 EMBL:EF016098 EMBL:AY080825
IPI:IPI00517369 IPI:IPI00554422 IPI:IPI00837466 IPI:IPI00891315
RefSeq:NP_001119373.1 RefSeq:NP_199288.4 UniGene:At.30056
ProteinModelPortal:A3EWL3 SMR:A3EWL3 STRING:A3EWL3 PRIDE:A3EWL3
EnsemblPlants:AT5G44750.2 GeneID:834504 KEGG:ath:AT5G44750
TAIR:At5g44750 HOGENOM:HOG000246421 KO:K03515 OMA:TIPYDFD
PhylomeDB:A3EWL3 ProtClustDB:CLSN2681660 Genevestigator:A3EWL3
Uniprot:A3EWL3
Length = 1105
Score = 141 (54.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 126/533 (23%), Positives = 217/533 (40%)
Query: 190 VIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKK 249
V+ IR +L T SAGI ++A+L + KP Q + V L +
Sbjct: 492 VLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISAEKVEEFLDQLPVGT 551
Query: 250 VRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARL 309
+ +G L +++V+ T +L S LQ F KT L+ +RG+D V A
Sbjct: 552 LPGVGSVLKEKLVKQ-NIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRSVTAVQ 610
Query: 310 VSKSIGCCKRFPGKTCLATRQDV----SHWIQELADEV------CERLEDDLTLN-KRRA 358
SKSIG + + +QDV H++Q L EV CE + TL K+R
Sbjct: 611 ESKSIGAEVNWGVR--FRDQQDVFILVQHFLQCLCKEVSLRLQGCEMIGRTFTLKIKKRK 668
Query: 359 QLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLFLG 418
+ G ++ SRSI + + D +EV +Q I+K D+ + +G
Sbjct: 669 KDAEEPTKYMGCGDCDNLSRSITVPA--ATDDIEV-LQRISKKLFGSFCLDVKE-VRGVG 724
Query: 419 LSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPE--QSTNHDSKKRDKTLLNFNQQT 476
L SK + PS + S SS P Q D+ K N +
Sbjct: 725 LQVSKLD--SADPS-------NKGSRTLKSWLSSAPAVVQIEQDDNVFAAKVRENSDCNR 775
Query: 477 PFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHS 536
P ++R+ + +S I+S D+ N+++ + D+ E ++N+ E + + T+
Sbjct: 776 PVTGGVSRLRES--NSEESSIQSG-DT-NSSLPPMCYLDM-EVLENLPPELLSELDGTYG 830
Query: 537 KDSNASDEDEESFNDKLVSIER-EVE-ESVGKDIEESLKNVSDVLFNEKVENLTMENKKS 594
+ E+ + ++ V + I+E LK++S K+ L+ +K
Sbjct: 831 --GKLFELIEKKRGKRRINCNSPHVSLDGTAASIKE-LKSLS-----VKIHGLSTSGEKE 882
Query: 595 IKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSD------------RDIHTSTPC-RR 641
K E P S ++ +N++ + LPS + D D+ + P RR
Sbjct: 883 YK-EPYVPHPSIART-SNQHTIEMTDLLPSSLSQVDVSVLQELPEELRADVLGAFPSHRR 940
Query: 642 KGSKNVFENKTLKSKEELPL-VKRVDNTIPNSFEFITYTRRQVKPENIS-NGN 692
+ S + +T K ++E P+ +K +N I SF + + + E +GN
Sbjct: 941 QQSSSDVPKETCKKQDEEPIDLKGTENEIGLSFSSLWFGNPPLWTEKFKVSGN 993
Score = 137 (53.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 38/115 (33%), Positives = 55/115 (47%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGG-IIAVNYEARHKGVTRHMRGDEAKQ 67
ID+DCF+ V K LH KP+AV + KG I + NY AR GV M AK
Sbjct: 378 IDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRHAKD 437
Query: 68 HCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
CP++ + VP + Y + +L V+ S DEA++D++D+
Sbjct: 438 LCPQLVI--VPY-----NFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDL 485
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 38/172 (22%), Positives = 66/172 (38%)
Query: 793 HPSVE--TNTHTI--LEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKD 848
HPS+ +N HTI + + SS+ VD S+ +R D+ A ++ + +
Sbjct: 890 HPSIARTSNQHTIEMTDLLPSSLSQVDV-SVLQELPEELRADVLGAFPSHRR------QQ 942
Query: 849 TESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATK---ADFIKESGDPNNEMCKST 905
+ S P + E ID + S + + K SG+ E S
Sbjct: 943 SSSDVPKETCKKQDEEPIDLKGTENEIGLSFSSLWFGNPPLWTEKFKVSGNCTMEKL-SA 1001
Query: 906 VQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIICDKC 957
+ F A PM ++ + + I++ S+ A + +D K I D C
Sbjct: 1002 IYFKV---------AQSRPMLSLVLQHAISEMSSFPDAASASDLDKAIYDVC 1044
Score = 40 (19.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 539 SNASDEDEESFNDKLVSIEREVEESVGKDIEE 570
++ASD D+ + D +++ + VG DIEE
Sbjct: 1031 ASASDLDKAIY-DVCELLKQYINLKVGGDIEE 1061
Score = 40 (19.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 846 IKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKST 905
+K S+ P+ V+ E ++ + K+R+ +S + +T ++ES N+E
Sbjct: 743 LKSWLSSAPA-VVQIEQDDNVFAAKVRE-NSDCNRPVTGGVSR--LRES---NSE----- 790
Query: 906 VQFHSNSINKGNGNADVSPMDTVDI 930
+SI G+ N+ + PM +D+
Sbjct: 791 ----ESSIQSGDTNSSLPPMCYLDM 811
>POMBASE|SPBC1347.01c [details] [associations]
symbol:rev1 "deoxycytidyl transferase Rev1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=ISO] [GO:0043504
"mitochondrial DNA repair" evidence=IC] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISO] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 PomBase:SPBC1347.01c Pfam:PF00533 GO:GO:0005739
GO:GO:0005730 GO:GO:0005819 GO:GO:0000287 GO:GO:0003684
GO:GO:0006260 EMBL:CU329671 GenomeReviews:CU329671_GR SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 GO:GO:0043504
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
KO:K03515 RefSeq:NP_596693.2 ProteinModelPortal:O94623
IntAct:O94623 STRING:O94623 EnsemblFungi:SPBC1347.01c.1
GeneID:2539723 KEGG:spo:SPBC1347.01c OMA:FHIDFDC OrthoDB:EOG49PF6V
NextBio:20800875 Uniprot:O94623
Length = 935
Score = 145 (56.1 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 49/154 (31%), Positives = 70/154 (45%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
SR + +D DCF+ V + + L KP+AV + K I + NYEAR G+ M
Sbjct: 276 SRFLLHVDFDCFFASVSTRFSHELRLKPVAVA--HGIKNSEIASCNYEARKFGIKNGMYV 333
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVL-SEFSNIVERASIDEAYIDLTD 121
AK CP + RV D Y + RE +L + + ++ SIDEA +D+T
Sbjct: 334 GTAKNLCPSL---RVVDY----DFGAYESVSREFYTILVNTLHDYIKVISIDEALLDITS 386
Query: 122 VVHERMK--SIGHIAASQL---SNTFV-VGFGPD 149
V I SQ+ +N V VG GP+
Sbjct: 387 SVSSFQDCFEIAESIRSQVREKTNCEVSVGIGPN 420
Score = 131 (51.2 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 94/468 (20%), Positives = 194/468 (41%)
Query: 172 DTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQS 231
D +L++ T I E IR+ V KT S GI N +LA+L KP
Sbjct: 378 DEALLDITSSVSSFQDCFEIAESIRSQVREKTNCEVSVGIGPNVLLARLALRKAKPHNVY 437
Query: 232 ILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTAS 291
L +V + + LS++ + +G ++ T+ +L++ LQ F
Sbjct: 438 SLSIENVFDVLSPLSVQDLPGVGSSQAQKLFNLYGVRTIGQLQRIEKFNLQETFGVNYGL 497
Query: 292 WLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERL-EDD 350
LY I+RGID + +N +SI + + ++D +++ L E+ R+ +
Sbjct: 498 HLYNISRGIDTDIINNETPRRSISVDVNWGVR--FVFQEDGIDFLKRLLHELLSRMGKCQ 555
Query: 351 LTLNKRRAQLLT----VSFTQET---DGKVNSCSRSIALASYKLQ-DIVEVSMQVINKTN 402
+ L++ + ++L F+ G+V S ++S S D++ + + KT
Sbjct: 556 VLLHQIQLRILKRADGAPFSPPKYLGAGEVTSFTKSSTFTSATNSFDLIWKKVTSMYKTI 615
Query: 403 SAPPISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHS-SLPEQSTNHD 461
+ P D+ +GL A K + + I++ ++ + +TS + SL S +
Sbjct: 616 NVDP-GDVRG----IGLQALKI--IKDNSKIRKDYRSI---QSITSRNKVSLKGASVDIS 665
Query: 462 SKKRDKTLLNFNQQ--------TPFQL-ALNRIERKLIDKFKSHIESKLDSCNANVDKLV 512
SK DK +++ +Q TP+ L + ++I + + ++S + + K
Sbjct: 666 SK--DKEIISQKKQLSPKLIPSTPYDLPSSSQISSSALAQLPPSMQSDIQQ-QLRLQKRS 722
Query: 513 IGDISEQIKNIAAENVRKYLRTHSKDSNASDEDE----ESFNDKLVSI--EREVEESVGK 566
I + Q+ + + +R D++ ++ +S D + ++++ +
Sbjct: 723 ITEYPSQLDPLFMVELPTPIRNEVNDNHEIAMNKRLSLKSHADNKIDERGKKKIRQENAF 782
Query: 567 DIEESLKNVSDVLFNEKVENLTM-ENKKSIKNECLSPVSSKSKDLTNE 613
D + S + V+ LT+ E K ++ + L + + DL +E
Sbjct: 783 DKLLQISKKSKTINKPNVDYLTLKELPKDLQKQILKESNLQKSDLISE 830
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 798 TNTHTIL-EEVTSSIET--VDNGSIE---TNAMTRIRDDIHLARENNTKFLADPIKDTES 851
TN+ ++ ++VTS +T VD G + A+ I+D+ + ++ +
Sbjct: 598 TNSFDLIWKKVTSMYKTINVDPGDVRGIGLQALKIIKDNSKIRKDYRSIQSITSRNKVSL 657
Query: 852 TGPSNVISTESNEVIDQTK 870
G S IS++ E+I Q K
Sbjct: 658 KGASVDISSKDKEIISQKK 676
Score = 43 (20.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 43/234 (18%), Positives = 94/234 (40%)
Query: 507 NVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGK 566
NVD + I Q I +N K + + + + ++ S V I + +E + +
Sbjct: 616 NVDPGDVRGIGLQALKIIKDN-SKIRKDYRSIQSITSRNKVSLKGASVDISSKDKEIISQ 674
Query: 567 DIEESLKNVS----DVLFNEKVENLTMEN-KKSIKNECLSPVSSKSKDLTN--ENLGHTF 619
+ S K + D+ + ++ + + S++++ + + + +T L F
Sbjct: 675 KKQLSPKLIPSTPYDLPSSSQISSSALAQLPPSMQSDIQQQLRLQKRSITEYPSQLDPLF 734
Query: 620 ET-LPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITY 678
LP+PI D H +R K+ +NK + + + K++ N+F+ +
Sbjct: 735 MVELPTPIRNEVNDNHEIAMNKRLSLKSHADNK-IDERGK----KKIRQE--NAFDKLLQ 787
Query: 679 TRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKL 732
++ K N N + K +D + I K +++K + + L KP +
Sbjct: 788 ISKKSKTINKPNVDYLTLKELPKDLQKQILK---ESNLQKSDLISEVKLEKPHI 838
Score = 42 (19.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 15/74 (20%), Positives = 32/74 (43%)
Query: 714 ISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKE 773
+ ++K T P + PT + D HE + NKR S +N + ++
Sbjct: 716 LRLQKRSITEYPSQLDPLFMVELPTPIRNEVNDNHEI--AMNKRLSLKSHADNKID-ERG 772
Query: 774 RERLNSKSCKDETL 787
++++ ++ D+ L
Sbjct: 773 KKKIRQENAFDKLL 786
>UNIPROTKB|E9PST4 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 RGD:620058 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 IPI:IPI00777177
Ensembl:ENSRNOT00000061462 ArrayExpress:E9PST4 Uniprot:E9PST4
Length = 771
Score = 164 (62.8 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I +DMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LATSNYHARRFGVRAAMPGFIA 156
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP++ + VP + KYR +EV +L+E+ S+DEAY+++T + E
Sbjct: 157 KRLCPQLII--VPP-----NFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQE 209
Query: 126 R 126
R
Sbjct: 210 R 210
Score = 113 (44.8 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 210 GIAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQC 267
GIA N +LAK+ +KP Q I+P S M + +L I+KV +G K+ ++++ L
Sbjct: 231 GIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIG-KVTEKMLLALGI 289
Query: 268 STMLELEKFSLKQLQSH-FEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKT 324
T EL + + L S F E +SW Y+ +A G+ + KS+ + F
Sbjct: 290 VTCTEL--YQQRALLSLLFSE--SSWHYFLHVALGLGSTDLARDGERKSMSVERTF--SE 343
Query: 325 CLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALAS 384
T + S L E+C L DL + + +T+ + D +V + + ++ A
Sbjct: 344 INKTEEQYS-----LCQELCTELAHDLQKEGLKGRTVTIKL-KNVDFEVKTRASTVPSAI 397
Query: 385 YKLQDIVEVSMQVINKTNSAPPISDLTPPLLFLGLSASKFS 425
+DI V+ +++ +A L L +G+ S FS
Sbjct: 398 STAEDIFAVAKELLRTEVTAGSPQPLR--LRLMGVRMSTFS 436
Score = 44 (20.5 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 858 ISTES-NEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
IS E+ NE +D + S+S++S+M S + A S D + ++ + +G
Sbjct: 552 ISLEAFNEHVDAC-LDGPSTSENSEMPSYSHAS----SADIGQQAHRAVPLWEK----RG 602
Query: 917 NGNADVSPMDTVDIINT 933
+G+ +++ D D+ T
Sbjct: 603 HGDGEITSGDGADLTET 619
Score = 43 (20.2 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 937 SSTVDSAINIADPTKIICDKC---SQPIDINELQEHQD 971
S + ++ N DP IC C + I + EH D
Sbjct: 525 SESFKTSENSNDPQTFICPVCFREQEGISLEAFNEHVD 562
Score = 41 (19.5 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 683 VKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRK-YETTRQSHLNKPKLFADFPTTSQ 741
VKP S + +K E P P I+ + + + S K K+ F T+
Sbjct: 475 VKPLETSRKKSFFDKKRSERIPNCQDPPRCKIAGEQALQASEPSQALK-KMSESFKTSEN 533
Query: 742 GNNPDT 747
N+P T
Sbjct: 534 SNDPQT 539
Score = 37 (18.1 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
GR +K ++ K ++ T+D FFK
Sbjct: 746 GRKTKGSTSKRTKPRDPRHTLDGFFK 771
Score = 37 (18.1 bits), Expect = 4.0e-13, Sum P(4) = 4.0e-13
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 445 PMTSEHSSLPEQS 457
P TSE+S +P S
Sbjct: 568 PSTSENSEMPSYS 580
>UNIPROTKB|Q4KWZ7 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0019985
"translesion synthesis" evidence=TAS] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0002206 "gene conversion of
immunoglobulin genes" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005654 GO:GO:0000287
GO:GO:0003684 GO:GO:0006260 GO:GO:0006302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03515 EMBL:AY675169 IPI:IPI00571721 RefSeq:NP_001025982.2
UniGene:Gga.24037 ProteinModelPortal:Q4KWZ7 SMR:Q4KWZ7
STRING:Q4KWZ7 GeneID:418703 KEGG:gga:418703 CTD:51455
HOGENOM:HOG000154094 HOVERGEN:HBG054140 InParanoid:Q4KWZ7
OrthoDB:EOG4GF3DF NextBio:20821851 GO:GO:0002206 Uniprot:Q4KWZ7
Length = 1255
Score = 127 (49.8 bits), Expect = 5.8e-14, Sum P(5) = 5.8e-14
Identities = 42/178 (23%), Positives = 77/178 (43%)
Query: 172 DTSLMENTEDFQELAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D +L++ TE E + + IR + ++T+ S G+ N +LA++ KP Q
Sbjct: 581 DEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAKPDGQ 640
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
L V + + +G + ++ +L T +L+ S+ +LQ F KT
Sbjct: 641 YHLKPEEVDDFIRGQLVTNLPGVGRSMESKLA-SLGIRTCGDLQCASMSKLQKEFGPKTG 699
Query: 291 SWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLE 348
LY RG+D PV KS+ + + ++ ++ L++E+ RLE
Sbjct: 700 QMLYRFCRGLDDRPVRTEKERKSVSAEINYGIR--FTQPKEAEAFLLSLSEEIQRRLE 755
Score = 108 (43.1 bits), Expect = 5.8e-14, Sum P(5) = 5.8e-14
Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 44 IIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEF 103
I + +YEAR G+ M +AK+ CP ++ D + Y+ + V +L+ +
Sbjct: 519 IASCSYEARQAGIKNGMFFGQAKKLCPNLQAVSY-------DFNAYKEVAQTVYEILASY 571
Query: 104 SNIVERASIDEAYIDLTDVVHE 125
++ +E S DEA +D+T+++ E
Sbjct: 572 THNIEAVSCDEALVDITEILTE 593
Score = 75 (31.5 bits), Expect = 5.8e-14, Sum P(5) = 5.8e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAV 33
+DMDCF+ V + P L GKP+AV
Sbjct: 426 VDMDCFFVSVAIRNRPDLKGKPVAV 450
Score = 67 (28.6 bits), Expect = 5.8e-14, Sum P(5) = 5.8e-14
Identities = 24/129 (18%), Positives = 58/129 (44%)
Query: 501 LDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREV 560
++ CN + +G + Q+ + N + + + S D E F ++ E+
Sbjct: 984 INGCNTALLSQPVGTVLLQVPELQEPNANMGINVIALPA-FSQVDPEVFAALPAELQAEL 1042
Query: 561 EESVGKDIEESLKNVSDVLFNE----KVENLTMENKKSI-KNECLSPVSSKSKDLTNENL 615
+++ + ++ + ++ ++ ++++ T +NKK I K +SPV L N+ L
Sbjct: 1043 KDAYDQRQKQPEQQPANAFVSKNPCLQLKHATTKNKKKIRKKNPVSPVKKIQSPLKNKLL 1102
Query: 616 GHTFETLPS 624
G + +P+
Sbjct: 1103 GSPAKNMPA 1111
Score = 59 (25.8 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 56/254 (22%), Positives = 105/254 (41%)
Query: 338 ELADEVCERLEDDLTLNKRRAQLLTVSFTQET--DGK---VNSCSRSIALASYKLQDIVE 392
+L V E L DL ++ Q+ T+ ET D K +N C+ AL S Q +
Sbjct: 947 QLDKSVLEALPPDL--REQVEQIYTIQ-QGETYGDSKREPINGCNT--ALLS---QPVGT 998
Query: 393 VSMQV--INKTNSAPPISDLTPPLLFLGLSASKFSPLGSHPSIQ---QFFKPQDHPE--P 445
V +QV + + N+ I+ + P F + F+ L + + + + Q PE P
Sbjct: 999 VLLQVPELQEPNANMGINVIALPA-FSQVDPEVFAALPAELQAELKDAYDQRQKQPEQQP 1057
Query: 446 MTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCN 505
+ S P H + K K + N +P + +I+ L +K + + +
Sbjct: 1058 ANAFVSKNPCLQLKHATTKNKKKIRKKNPVSP----VKKIQSPLKNKLLGSPAKNMPAAS 1113
Query: 506 ANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDE-ESFNDKLVSIEREVE-ES 563
+ KL+ G + ++ AA+ + + D +A ++ SF + ++ VE
Sbjct: 1114 GSPQKLIDGFLKQE--GAAAQLEAVPSTSDASDPSALQTEQCGSFRPQAPNLAGAVEFND 1171
Query: 564 VGKDIEESLKNVSD 577
V ++E + +SD
Sbjct: 1172 VKTLLKEWITTISD 1185
Score = 37 (18.1 bits), Expect = 5.8e-14, Sum P(5) = 5.8e-14
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 365 FTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLF---LGLSA 421
F D +++S SR+ + + + ++KT+SA ++ L P+ L LS
Sbjct: 881 FVAAMDLEISSDSRTCTVLPSRGTHLTAGLNSNVSKTDSAVKLNGLHSPISVKSRLNLSI 940
Query: 422 SKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKK 464
S S+ + P D E + ++ + + T DSK+
Sbjct: 941 EVPSASQLDKSVLEALPP-DLREQVEQIYT-IQQGETYGDSKR 981
Score = 37 (18.1 bits), Expect = 4.9e-11, Sum P(5) = 4.9e-11
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 635 TSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPN 671
+ PC + K ++ K + VK++ + + N
Sbjct: 1063 SKNPCLQLKHATTKNKKKIRKKNPVSPVKKIQSPLKN 1099
>SGD|S000002827 [details] [associations]
symbol:RAD30 "DNA polymerase eta, involved in translesion
synthesis during post-rep" species:4932 "Saccharomyces cerevisiae"
[GO:0042276 "error-prone translesion synthesis" evidence=IDA;IMP]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0070987 "error-free translesion synthesis" evidence=IDA]
[GO:0005657 "replication fork" evidence=IPI] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SGD:S000002827 EMBL:U33007 GO:GO:0005634
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:BK006938 KO:K09043
GO:GO:0005657 GO:GO:0003887 GO:GO:0070987 GO:GO:0042276
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
RefSeq:NP_010707.3 GeneID:852028 KEGG:sce:YDR419W KO:K03509
OrthoDB:EOG4M0J8V PIR:S69702 RefSeq:NP_010711.3 PDB:1JIH PDB:2R8J
PDB:2R8K PDB:2WTF PDB:2XGP PDB:2XGQ PDB:3MFH PDB:3MFI PDB:3OHA
PDB:3OHB PDBsum:1JIH PDBsum:2R8J PDBsum:2R8K PDBsum:2WTF
PDBsum:2XGP PDBsum:2XGQ PDBsum:3MFH PDBsum:3MFI PDBsum:3OHA
PDBsum:3OHB ProteinModelPortal:Q04049 SMR:Q04049 DIP:DIP-6500N
IntAct:Q04049 MINT:MINT-708283 STRING:Q04049 PaxDb:Q04049
EnsemblFungi:YDR419W GeneID:852033 KEGG:sce:YDR423C CYGD:YDR419w
HOGENOM:HOG000065930 OMA:IPIHTAV EvolutionaryTrace:Q04049
NextBio:970255 Genevestigator:Q04049 GermOnline:YDR419W
Uniprot:Q04049
Length = 632
Score = 130 (50.8 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 47/197 (23%), Positives = 85/197 (43%)
Query: 83 KADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERM------KSIGHI--- 133
K + YR R+ + + ++VERASIDE ++DL + + + G +
Sbjct: 125 KVSLEPYRRESRKALKIFKSACDLVERASIDEVFLDLGRICFNMLMFDNEYELTGDLKLK 184
Query: 134 -AASQLSNTFVVGFGPDNNDEDA--RKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGV 190
A S + F+ G N+ K +++ G V++ L+ + +D LA+
Sbjct: 185 DALSNIREAFIGGNYDINSHLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVI-LALGSQ 243
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSV-SML-YANLSIK 248
+ + IR ++ + S G++ K + KL KP Q+I+ + L I
Sbjct: 244 VCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKNDCLLDFLDCGKFEIT 303
Query: 249 KVRHLGGKLGDEVVETL 265
LGG LG E+++ L
Sbjct: 304 SFWTLGGVLGKELIDVL 320
Score = 87 (35.7 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGK-PLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDE 64
IA IDM+ F+ QVE ++ L + P+ VQ+N+ IIAV+Y AR G++R E
Sbjct: 26 IAHIDMNAFFAQVE-QMRCGLSKEDPVVCVQWNS-----IIAVSYAARKYGISRMDTIQE 79
Query: 65 AKQHCPEI 72
A + C +
Sbjct: 80 ALKKCSNL 87
Score = 84 (34.6 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 290 ASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLED 349
A L+ ++RG P+++R V KS+ K GK+C + +S W++ E+ R++D
Sbjct: 371 AEKLFKLSRGRYGLPLSSRPVVKSMMSNKNLRGKSCNSIVDCIS-WLEVFCAELTSRIQD 429
Query: 350 -DLTLNKRRAQLLTVSFTQETDG-KVNSCSRSIALASYKLQ--DIVEVSMQVINKTNSAP 405
+ NK TVS + +T +V S +A Q ++++V ++ + +
Sbjct: 430 LEQEYNKIVIPR-TVSISLKTKSYEVYRKSGPVAYKGINFQSHELLKVGIKFVTDLDIKG 488
Query: 406 PISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKR 465
P L L ++ + F + ++ F Q H S E+ T SK
Sbjct: 489 KNKSYYP-LTKLSMTITNFDIIDLQKTVVDMFGNQVHT--FKSSAGKEDEEKTT-SSKAD 544
Query: 466 DKT 468
+KT
Sbjct: 545 EKT 547
Score = 56 (24.8 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 936 DSSTVDSAINIADPTKIICDKCSQPI-DINELQEHQDYHFAL 976
+ T S + P K+ C K D LQEH DYH AL
Sbjct: 535 EEKTTSSKADEKTP-KLECCKYQVTFTDQKALQEHADYHLAL 575
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 498 ESKLDSCNANVDKLVIGDISEQI 520
+S D +N+D L D++E++
Sbjct: 352 QSDYDRSTSNIDPLKTADLAEKL 374
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 565 GKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPS 624
GK S + VL E ++ L + ++ SIK+ ++ +N G E L +
Sbjct: 298 GKFEITSFWTLGGVLGKELIDVLDLPHENSIKH---------IRETWPDNAGQLKEFLDA 348
Query: 625 PILTSDRDIHTST--PCRRKG-SKNVFENKTLKSKEELPLVKR 664
+ SD D TS P + ++ +F K + + LPL R
Sbjct: 349 KVKQSDYDRSTSNIDPLKTADLAEKLF--KLSRGRYGLPLSSR 389
>ZFIN|ZDB-GENE-081105-180 [details] [associations]
symbol:si:dkey-57a22.7 "si:dkey-57a22.7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 ZFIN:ZDB-GENE-081105-180
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03515
HOGENOM:HOG000154094 HOVERGEN:HBG054140 EMBL:CR392332 EMBL:CR536604
IPI:IPI00862463 RefSeq:NP_001116772.1 UniGene:Dr.61598 SMR:B0UY97
Ensembl:ENSDART00000134915 GeneID:570043 KEGG:dre:570043
NextBio:20889959 Uniprot:B0UY97
Length = 1268
Score = 153 (58.9 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 172 DTSLMENTEDFQELAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D +L++ T EL ++ + IR + KT S G++ N +LA++ KP+ Q
Sbjct: 609 DEALVDATALLVELGVSPDELARSIREDIKEKTGCCASVGMSSNILLARMATRKAKPKGQ 668
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
+L V + + + +G + ++ +L ST +L++ SL QLQ F +T
Sbjct: 669 YLLRSEEVDDFIRDQPVSSLPGVGRSMSSKLT-SLGVSTCGDLQQLSLSQLQREFGPRTG 727
Query: 291 SWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDD 350
L+ RG+D PV + KS+ + + ++ ++ L+ EV +RLE
Sbjct: 728 QTLFRFCRGLDDRPVRSEKERKSVSAEMNYNIR--FTQVEEAESFLNNLSMEVQKRLEG- 784
Query: 351 LTLNKRRAQL 360
L RR L
Sbjct: 785 AGLRGRRVTL 794
Score = 101 (40.6 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 44 IIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEF 103
I + +YEAR GV M AKQ CP+++ VP D Y+ + +L+ +
Sbjct: 547 IASCSYEARQAGVRNGMFFGRAKQLCPDLQ--SVPY-----DFHAYKEVALAMYEILASY 599
Query: 104 SNIVERASIDEAYIDLTDVVHERMKSIGHIAAS 136
++ +E S DEA +D T ++ E S +A S
Sbjct: 600 THNIEALSCDEALVDATALLVELGVSPDELARS 632
Score = 74 (31.1 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIA 46
+DMDCF+ V + P L GKP+AV N +G G +A
Sbjct: 455 VDMDCFFVSVGIRHRPDLIGKPVAVTS-N--RGPGRVA 489
Score = 37 (18.1 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 927 TVDIINTIADSSTVDSAINIADPTKIICDKCS 958
T II + D S VD + A P ++ + CS
Sbjct: 1041 TTGIILELPDFSQVDPDVFAALPRELQEELCS 1072
>UNIPROTKB|Q3ZAI3 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HSSP:P96022 RefSeq:YP_180766.1
ProteinModelPortal:Q3ZAI3 STRING:Q3ZAI3 GeneID:3229123
KEGG:det:DET0011 PATRIC:21607125 OMA:PDGITIL ProtClustDB:CLSK836830
BioCyc:DETH243164:GJNF-11-MONOMER Uniprot:Q3ZAI3
Length = 390
Score = 147 (56.8 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 42/134 (31%), Positives = 65/134 (48%)
Query: 1 MTSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHM 60
M R + +D+D F+ VE L P L KP+ +V + G + A +YEAR G+ M
Sbjct: 1 MAIRRVMHVDLDAFFVSVEQSLRPELKSKPV-IVGGKPERRGVVAAASYEARKFGIHSGM 59
Query: 61 RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
AK CP+ + G + YR + + +LS+FS +E +DEAY+++T
Sbjct: 60 PLLSAKHLCPQAVF-----IEGNHRL--YREYSEKFMQILSDFSPFLEPMGLDEAYLEVT 112
Query: 121 DVVHERMKSIGHIA 134
SIG +A
Sbjct: 113 GF-ESLHGSIGEMA 125
Score = 112 (44.5 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 172 DTSLMENTEDFQEL-AIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D + +E T F+ L G + +IR + ++ + S GIA++KV+AK+ KP Q
Sbjct: 105 DEAYLEVT-GFESLHGSIGEMALKIRRRITAELSINASIGIANSKVVAKIATERAKPNGQ 163
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
+P + A L I + +G K + +++L +T+ L L+ H A
Sbjct: 164 CEVPAGEEAAFLAPLDISIMPGIGKKT-EYHLKSLGINTLGRLAGIPATFLKIHLGTY-A 221
Query: 291 SWLYYIARGIDHEPVNARLVSKSI 314
+L A GID+ PV +KSI
Sbjct: 222 PYLLNAAAGIDNRPVEMPAEAKSI 245
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 722 TRQSHLNKP 730
TRQ HLN P
Sbjct: 299 TRQKHLNHP 307
>TIGR_CMR|DET_0011 [details] [associations]
symbol:DET_0011 "DNA polymerase IV, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
RefSeq:YP_180766.1 ProteinModelPortal:Q3ZAI3 STRING:Q3ZAI3
GeneID:3229123 KEGG:det:DET0011 PATRIC:21607125 OMA:PDGITIL
ProtClustDB:CLSK836830 BioCyc:DETH243164:GJNF-11-MONOMER
Uniprot:Q3ZAI3
Length = 390
Score = 147 (56.8 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 42/134 (31%), Positives = 65/134 (48%)
Query: 1 MTSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHM 60
M R + +D+D F+ VE L P L KP+ +V + G + A +YEAR G+ M
Sbjct: 1 MAIRRVMHVDLDAFFVSVEQSLRPELKSKPV-IVGGKPERRGVVAAASYEARKFGIHSGM 59
Query: 61 RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
AK CP+ + G + YR + + +LS+FS +E +DEAY+++T
Sbjct: 60 PLLSAKHLCPQAVF-----IEGNHRL--YREYSEKFMQILSDFSPFLEPMGLDEAYLEVT 112
Query: 121 DVVHERMKSIGHIA 134
SIG +A
Sbjct: 113 GF-ESLHGSIGEMA 125
Score = 112 (44.5 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 172 DTSLMENTEDFQEL-AIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D + +E T F+ L G + +IR + ++ + S GIA++KV+AK+ KP Q
Sbjct: 105 DEAYLEVT-GFESLHGSIGEMALKIRRRITAELSINASIGIANSKVVAKIATERAKPNGQ 163
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
+P + A L I + +G K + +++L +T+ L L+ H A
Sbjct: 164 CEVPAGEEAAFLAPLDISIMPGIGKKT-EYHLKSLGINTLGRLAGIPATFLKIHLGTY-A 221
Query: 291 SWLYYIARGIDHEPVNARLVSKSI 314
+L A GID+ PV +KSI
Sbjct: 222 PYLLNAAAGIDNRPVEMPAEAKSI 245
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 722 TRQSHLNKP 730
TRQ HLN P
Sbjct: 299 TRQKHLNHP 307
>UNIPROTKB|E9PST3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00777918 Ensembl:ENSRNOT00000061463
ArrayExpress:E9PST3 Uniprot:E9PST3
Length = 793
Score = 164 (62.8 bits), Expect = 2.6e-13, Sum P(5) = 2.6e-13
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I +DMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LATSNYHARRFGVRAAMPGFIA 156
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP++ + VP + KYR +EV +L+E+ S+DEAY+++T + E
Sbjct: 157 KRLCPQLII--VPP-----NFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQE 209
Query: 126 R 126
R
Sbjct: 210 R 210
Score = 107 (42.7 bits), Expect = 2.6e-13, Sum P(5) = 2.6e-13
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 211 IAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCS 268
IA N +LAK+ +KP Q I+P S M + +L I+KV +G K+ ++++ L
Sbjct: 254 IAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIG-KVTEKMLLALGIV 312
Query: 269 TMLELEKFSLKQLQSH-FEEKTASWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTC 325
T EL + + L S F E +SW Y+ +A G+ + KS+ + F
Sbjct: 313 TCTEL--YQQRALLSLLFSE--SSWHYFLHVALGLGSTDLARDGERKSMSVERTF--SEI 366
Query: 326 LATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASY 385
T + S L E+C L DL + + +T+ + D +V + + ++ A
Sbjct: 367 NKTEEQYS-----LCQELCTELAHDLQKEGLKGRTVTIKL-KNVDFEVKTRASTVPSAIS 420
Query: 386 KLQDIVEVSMQVINKTNSAPPISDLTPPLLFLGLSASKFS 425
+DI V+ +++ +A L L +G+ S FS
Sbjct: 421 TAEDIFAVAKELLRTEVTAGSPQPLR--LRLMGVRMSTFS 458
Score = 44 (20.5 bits), Expect = 2.6e-13, Sum P(5) = 2.6e-13
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 858 ISTES-NEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
IS E+ NE +D + S+S++S+M S + A S D + ++ + +G
Sbjct: 574 ISLEAFNEHVDAC-LDGPSTSENSEMPSYSHAS----SADIGQQAHRAVPLWEK----RG 624
Query: 917 NGNADVSPMDTVDIINT 933
+G+ +++ D D+ T
Sbjct: 625 HGDGEITSGDGADLTET 641
Score = 43 (20.2 bits), Expect = 4.7e-13, Sum P(4) = 4.7e-13
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 937 SSTVDSAINIADPTKIICDKC---SQPIDINELQEHQD 971
S + ++ N DP IC C + I + EH D
Sbjct: 547 SESFKTSENSNDPQTFICPVCFREQEGISLEAFNEHVD 584
Score = 41 (19.5 bits), Expect = 2.6e-13, Sum P(5) = 2.6e-13
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 683 VKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRK-YETTRQSHLNKPKLFADFPTTSQ 741
VKP S + +K E P P I+ + + + S K K+ F T+
Sbjct: 497 VKPLETSRKKSFFDKKRSERIPNCQDPPRCKIAGEQALQASEPSQALK-KMSESFKTSEN 555
Query: 742 GNNPDT 747
N+P T
Sbjct: 556 SNDPQT 561
Score = 37 (18.1 bits), Expect = 2.6e-13, Sum P(5) = 2.6e-13
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
GR +K ++ K ++ T+D FFK
Sbjct: 768 GRKTKGSTSKRTKPRDPRHTLDGFFK 793
Score = 37 (18.1 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 445 PMTSEHSSLPEQS 457
P TSE+S +P S
Sbjct: 590 PSTSENSEMPSYS 602
>UNIPROTKB|Q5JTF2 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006301 GO:GO:0003887 GO:GO:0006290 EMBL:AL353602
EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181 HOGENOM:HOG000115605
IPI:IPI00646080 SMR:Q5JTF2 STRING:Q5JTF2 Ensembl:ENST00000443535
Uniprot:Q5JTF2
Length = 72
Score = 184 (69.8 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 35/71 (49%), Positives = 53/71 (74%)
Query: 60 MRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDL 119
M D+AK+ CP++ L +V RGKA+++KYR A EV+ ++S F+ ++ERASIDEAY+DL
Sbjct: 1 MWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDL 59
Query: 120 TDVVHERMKSI 130
T V ER++ +
Sbjct: 60 TSAVQERLQKL 70
>UNIPROTKB|F1STE9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:FP326722 EMBL:CU972417 EMBL:CU694748
Ensembl:ENSSSCT00000008958 Uniprot:F1STE9
Length = 1253
Score = 128 (50.1 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 43/186 (23%), Positives = 78/186 (41%)
Query: 172 DTSLMENTEDFQELAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D +L++ TE E + +R + +T+ S GI N +LA++ KP Q
Sbjct: 569 DEALVDITEILAETRLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQ 628
Query: 231 SILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
L V + + +G + +++ +L T +L+ ++ +LQ F KT
Sbjct: 629 YHLKPEEVDDFIRGQLVTNLPGVGRSMESKLM-SLGIRTCGDLQYMTMAKLQKEFGPKTG 687
Query: 291 SWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDD 350
LY RG+D PV KS+ + + ++ ++ L++E+ RLE
Sbjct: 688 QMLYRFCRGLDDRPVRTEKERKSVSAEINYGIR--FTQPKEAEAFLLSLSEEIQRRLETA 745
Query: 351 LTLNKR 356
KR
Sbjct: 746 GVKGKR 751
Score = 113 (44.8 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 44 IIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEF 103
I + +YEAR G+ M +AKQ CP ++ VP D Y+ R + L+ +
Sbjct: 507 IASCSYEARQVGIRNGMYFGQAKQLCPSLQA--VPY-----DFHAYKEVARTMYETLASY 559
Query: 104 SNIVERASIDEAYIDLTDVVHE 125
++ +E S DEA +D+T+++ E
Sbjct: 560 THNIEAVSCDEALVDITEILAE 581
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAV 33
+DMDCF+ V + P L GKP+AV
Sbjct: 419 VDMDCFFVSVGIRNRPDLKGKPVAV 443
Score = 43 (20.2 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 590 ENKKSIKNECLSPVSSKSKDLTNENLGHTFETLP 623
E K++ K +SP L N+ L +TLP
Sbjct: 1072 EKKRNKKKSPMSPPKKIQSPLKNKLLNSPAKTLP 1105
>DICTYBASE|DDB_G0287149 [details] [associations]
symbol:DDB_G0287149 "UMUC-like DNA-repair protein"
species:44689 "Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 dictyBase:DDB_G0287149
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
EMBL:AAFI02000098 KO:K03511 RefSeq:XP_637357.1
ProteinModelPortal:Q54KS3 EnsemblProtists:DDB0304434 GeneID:8625979
KEGG:ddi:DDB_G0287149 InParanoid:Q54KS3 OMA:YANVEEM Uniprot:Q54KS3
Length = 517
Score = 132 (51.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 44/138 (31%), Positives = 64/138 (46%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
SR IDMD FY VE N L G P+AV + ++ NY AR GV + G
Sbjct: 80 SRTFIHIDMDAFYANVEEMDNKELIGHPVAVGSIDM-----LVTSNYAARAYGVRSGLPG 134
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
A + CP + + +PS + D +YR + +L +F S+DE ID+T+
Sbjct: 135 LLAMKLCPHLII--LPS---RMD--RYREVSLIIRNILYKFDKNYVSPSLDEGCIDITEY 187
Query: 123 VHERMKSIGHIAASQLSN 140
+ + G A+QL N
Sbjct: 188 LKDNENLTGIDVANQLQN 205
Score = 122 (48.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 70/334 (20%), Positives = 139/334 (41%)
Query: 172 DTSLMENTEDFQELA-IAGV-IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQK 229
D ++ TE ++ + G+ + +++ + KT CS GI+ + +L+K+ ++KP
Sbjct: 178 DEGCIDITEYLKDNENLTGIDVANQLQNDIFEKTTLTCSMGISCSPLLSKISSEINKPNG 237
Query: 230 QSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLEL--EKFSLKQLQSHFEE 287
L + + IKK+ +G K+ E+++TL + ++ ++ L L E+
Sbjct: 238 YFYLDKQYSQEFIKTIQIKKLPGIG-KVRQELLKTLGLEFVSDIIEHRYELYYLLP--EQ 294
Query: 288 KTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTC--LATRQDVSHWIQELADEVCE 345
+ + + +A I + R+ K K K C L +D+ ++ L D+ E
Sbjct: 295 RELLFKHALAIPIFPNKSSFRINKKKTMISKE---KNCKELYDEKDLEDLMKSLFDKAIE 351
Query: 346 RLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAP 405
L + + A L V Q+ KV + S + +++ S+Q IN ++ P
Sbjct: 352 MLN----IENKYATTLIVK-VQDFSFKVINYSYQL-ISTTTTSSSSSSSLQ-INSISTIP 404
Query: 406 PISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKR 465
I+ T +S + + I ++ P S SS S+ K
Sbjct: 405 IITTSTNNNNDDDISTEEKECITKEEEIDSYYLDSPPSSPSISSSSSSSSSSSKQSPCKL 464
Query: 466 DKTLL---NFNQQTP--FQLALNRIERKLIDKFK 494
KT + NFN+ + ++L +N E +K +
Sbjct: 465 KKTFIYPNNFNEHSEKIWKLFINTTENISFEKIR 498
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 553 LVSIEREVEESVG-KDIEESLKNVSDVLFNEKVENLTMENK 592
++S E+ +E KD+E+ +K+ LF++ +E L +ENK
Sbjct: 322 MISKEKNCKELYDEKDLEDLMKS----LFDKAIEMLNIENK 358
>UNIPROTKB|Q0BZW2 [details] [associations]
symbol:dinB "DNA polymerase IV" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006261 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:YP_760981.1 ProteinModelPortal:Q0BZW2
STRING:Q0BZW2 GeneID:4289730 KEGG:hne:HNE_2286 PATRIC:32217415
OMA:PALCRDC ProtClustDB:PRK02794
BioCyc:HNEP228405:GI69-2308-MONOMER Uniprot:Q0BZW2
Length = 424
Score = 153 (58.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 46/124 (37%), Positives = 64/124 (51%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
S IA +D D FY VE + NP+L KPL V + G + Y AR GV M
Sbjct: 35 SLTIAHVDCDAFYASVEKRDNPTLKDKPLIV---GGGQRGVVTTCCYIARLYGVRSAMPM 91
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDL--T 120
+A + CP+ + VP D KYR A + + A + + +V++ SIDEAY+DL T
Sbjct: 92 FKALKACPDAVV--VPP-----DFRKYREAAKAIRAEMDHLTPLVQQVSIDEAYLDLSGT 144
Query: 121 DVVH 124
D +H
Sbjct: 145 DRLH 148
Score = 95 (38.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 208 SAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQC 267
S G++ NK LAK L KP+ +I+ A + + +G K + + +
Sbjct: 172 SVGLSSNKFLAKTASELDKPRGFAIIAPEEAEAFLAPHPVGFLHGVGPKFAESLNKD-GF 230
Query: 268 STMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLVSKSI 314
T+ +++K LK L + E T WL A G D+ VN KS+
Sbjct: 231 YTIEDIQKADLKSLIRRYGE-TGDWLKRCAHGRDNRKVNPHEDRKSV 276
Score = 41 (19.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 707 ITKPIGSISMRKYETTRQSHLNKPKLFA 734
+T +G +S K+ S L+KP+ FA
Sbjct: 169 VTVSVG-LSSNKFLAKTASELDKPRGFA 195
>TIGR_CMR|SPO_3280 [details] [associations]
symbol:SPO_3280 "DNA polymerase IV, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003684 GO:GO:0006281 GO:GO:0006261
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:PALCRDC ProtClustDB:PRK02794
RefSeq:YP_168477.1 ProteinModelPortal:Q5LND1 GeneID:3193147
KEGG:sil:SPO3280 PATRIC:23380003 Uniprot:Q5LND1
Length = 420
Score = 141 (54.7 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 1 MTSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHM 60
+ S IA +D D FY VE + NP L KP+ + K G + Y AR +GV M
Sbjct: 35 LDSLTIAHMDCDAFYASVEKRDNPDLADKPVII---GGGKRGVVSTACYVARIRGVRSAM 91
Query: 61 RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
+A + CPE + + P + A++SK ++ A++ E + +VE S+DEA++DL+
Sbjct: 92 PMFQALKLCPEAVVIK-PRMSVYAEVSK------QIRALMDELTPVVEPLSLDEAFMDLS 144
Query: 121 DVVHERMKSIGHIAASQLS 139
+R+ GH A L+
Sbjct: 145 GT--QRLH--GHPPAVMLA 159
Score = 105 (42.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 208 SAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQC 267
S G++HNK LAK+ L KP+ S++ ++ + + ++ + +G E +E
Sbjct: 174 SIGLSHNKFLAKVASDLEKPRGFSVIGRAETAEFLRDKPVRLIWGIG-PAAQESLERAGI 232
Query: 268 STMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLA 327
T +L ++ + L + F L+++ARG D V+A KSI F T A
Sbjct: 233 RTFTDLLRWEQEALVARFGAM-GQRLWHLARGEDRRRVSAHDPIKSISNETTFFEDTGDA 291
Query: 328 TRQDVSHWIQELADEVCER 346
D W +A++V +R
Sbjct: 292 DVLDGHIW--RMAEKVADR 308
>WB|WBGene00017696 [details] [associations]
symbol:polk-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0003887 EMBL:FO080222 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 EMBL:FO080380 GeneTree:ENSGT00530000062942
PIR:S44637 RefSeq:NP_001122692.1 RefSeq:NP_001122693.1
UniGene:Cel.10581 ProteinModelPortal:P34409 SMR:P34409
STRING:P34409 EnsemblMetazoa:F22B7.6a GeneID:176209
KEGG:cel:CELE_F22B7.6 UCSC:F22B7.6b.2 CTD:176209 WormBase:F22B7.6a
WormBase:F22B7.6b HOGENOM:HOG000082711 InParanoid:P34409 KO:K03511
OMA:FMLAKIC NextBio:891590 Uniprot:P34409
Length = 596
Score = 207 (77.9 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 103/405 (25%), Positives = 175/405 (43%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRG 62
SR IDMD ++ VE + NP+L P+AV + NY AR GV M G
Sbjct: 82 SRDCVCIDMDAYFAAVEMRDNPALRTVPMAV-----GSSAMLSTSNYLARRFGVRAGMPG 136
Query: 63 DEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV 122
+ + CP + + VP + KY R+ + E+ + V S+DEA+IDLTD
Sbjct: 137 FISNKLCPSLTI--VPG-----NYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDLTDY 189
Query: 123 V--HERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTE 180
V + K+ ++ F D N+ + E + + ++ E
Sbjct: 190 VASNTEKKTFKRHRFGGDCPCWLPRF--DENENTLEDLKIEESICPKCEKSRKIYYDHVE 247
Query: 181 DFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP--QSSV 238
A V EIR V T CSAGIA N +LAK+ L+KP Q +L ++++
Sbjct: 248 FGTGREEA---VREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLENDKNAI 304
Query: 239 SMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELE-KFSLKQLQSHFEEKTASWLYYIA 297
+L I+KV +G ++ + ++ + T+ ++ K +L L F + A
Sbjct: 305 MEFLKDLPIRKVGGIG-RVCEAQLKAMDIQTVGDMNLKKNLYPLC--FTPLSQESFLRTA 361
Query: 298 RGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKR- 356
G+ P + KSI + F + D + ++E E+C LE+D+ +
Sbjct: 362 LGLPGRPSESDPRRKSISVERTF------SPTSDFNILLEE-HQEICRMLEEDVRKSGIV 414
Query: 357 RAQLLTVSFTQET-DGKVNSCSRSIALASYKLQDIVEVSMQVINK 400
+ +T+ + D S + S + S L+DI + S++++ K
Sbjct: 415 GGKTVTLKLKLSSFDVLTRSLTPSDVVKS--LEDIQKFSLELLEK 457
Score = 44 (20.5 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 461 DSKKRDKTLLNFNQQTPFQLA-LNRIERK------LIDKFK-----SHIESKLDSCNANV 508
D KKR KT+ F + Q+ L E ++D + +E++LD N +V
Sbjct: 478 DEKKRSKTITEFWNEKKLQIQNLQGSENVDDDDVIMMDTRPCPICGTDVENRLDVMNCHV 537
Query: 509 DKLVI---GDISEQIKNIAAEN 527
D+ ++ D ++ ++ EN
Sbjct: 538 DECILKVQNDDGPELICVSVEN 559
Score = 37 (18.1 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1024 KKLKTIDQFFK 1034
KK+ TID F+K
Sbjct: 583 KKMVTIDSFWK 593
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 697 KTDDEDSPQVITKPIGSISMRKYE--TTRQSHLN--KPK 731
K ++D P++I + + S +K E +T++ L +PK
Sbjct: 543 KVQNDDGPELICVSVENKSTQKPERPSTKKRKLQEKRPK 581
>POMBASE|SPCC553.07c [details] [associations]
symbol:kpa1 "DinB translesion DNA repair polymerase, pol
kappa" species:4896 "Schizosaccharomyces pombe" [GO:0000077 "DNA
damage checkpoint" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISM]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 PomBase:SPCC553.07c
GO:GO:0005829 GO:GO:0007126 GO:GO:0000077 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0000790 GO:GO:0003887 GO:GO:0019985 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:Q9UHC5 KO:K03511
PIR:T41397 RefSeq:NP_587767.2 ProteinModelPortal:O74944
STRING:O74944 EnsemblFungi:SPCC553.07c.1 GeneID:2539547
KEGG:spo:SPCC553.07c OMA:VHVDCDA OrthoDB:EOG441TMM NextBio:20800707
Uniprot:O74944
Length = 547
Score = 130 (50.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV-NYEARHKGVTRHMR 61
++II +D D FY +E NP L P+AV G ++ NY AR GV M
Sbjct: 129 TQIIVHVDCDAFYASIEELKNPKLKSLPMAV-------GKSVLCTANYVARKFGVRSAMP 181
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
A++ CP++ + +P ++S+Y +E+ VL+++ + + ASIDE Y++LT
Sbjct: 182 EFIARKICPDLVV--IP-----LNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTS 234
Query: 122 VVHERMKSI 130
H R++ +
Sbjct: 235 --HLRLQEL 241
Score = 112 (44.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 67/278 (24%), Positives = 127/278 (45%)
Query: 183 QELAIA----GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP--QS 236
QELA ++VE+IR V +T S GIA NK+LAK+ KP Q +P +
Sbjct: 239 QELAFTVENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASNKRKPNNQFFIPFDEI 298
Query: 237 SVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYI 296
+S +L +++V +G L +++ L+ T ++++ +L L F K+ L
Sbjct: 299 GISKFMNDLPVREVSGIGRVLEQQLLG-LEIKTCGDIQR-NLVILSYIFLPKSFQNLLRC 356
Query: 297 ARGIDHEPVNARLVSK--SIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLED-DLTL 353
+ G ++ SK +IG F L++ + + ++ L V E L+ L
Sbjct: 357 SYGFGTTILDEYGESKRKTIGSEATFSSN--LSSPSIIEYKLRLLVQNVSENLQKRGLVT 414
Query: 354 NKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPP 413
N + T F +V++ +SI + D+++ ++Q++ + S P +T
Sbjct: 415 NSIAIKYKTSEF------QVHTKQKSIGQFIHSESDLLKPALQLLRQ--SYP----MT-- 460
Query: 414 LLFLGLSASKFSPLGSHPSIQQFFKPQDH-PEPMTSEH 450
+ LG+ A+K ++Q F+ Q+ P P+ ++
Sbjct: 461 IRLLGVRATKLVSKSRCLAMQLKFQSQNTVPCPVCQKN 498
>UNIPROTKB|P63985 [details] [associations]
symbol:dinB1 "DNA polymerase IV 1" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842577 GO:GO:0003887 PIR:F70760
RefSeq:NP_216053.2 RefSeq:NP_336041.2 RefSeq:YP_006514925.1
ProteinModelPortal:P63985 SMR:P63985
EnsemblBacteria:EBMYCT00000000713 EnsemblBacteria:EBMYCT00000071148
GeneID:13320135 GeneID:886414 GeneID:924358 KEGG:mtc:MT1589
KEGG:mtu:Rv1537 KEGG:mtv:RVBD_1537 PATRIC:18125261
TubercuList:Rv1537 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
OMA:LKKADMS ProtClustDB:PRK03348 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 Uniprot:P63985
Length = 468
Score = 126 (49.4 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 50/197 (25%), Positives = 87/197 (44%)
Query: 193 EEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKVRH 252
E +R V +T S G K +AK+ GL KP ++ + L + L ++++
Sbjct: 127 ERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLWG 186
Query: 253 LGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARLVSK 312
+G + +E + L T+ +L S + + L+ +ARGID PV R +K
Sbjct: 187 IG-PVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 245
Query: 313 SIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSFTQETDGK 372
I F L T + + I +A+ +RL D R A+ +TV +++D
Sbjct: 246 QISAESTFA--VDLTTMEQLHEAIDSIAEHAHQRLLRD----GRGARTITVKL-KKSD-- 296
Query: 373 VNSCSRSIALASYKLQD 389
+++ +RS A Y D
Sbjct: 297 MSTLTRS-ATMPYPTTD 312
Score = 109 (43.4 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 1 MTSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIA-VNYEARHKGVTRH 59
M SR + +DMD F+ VE P+L G+P+ V G G++A +YEAR G
Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLG---GRGVVAGASYEARAYGARSA 57
Query: 60 MRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYID 118
M +A++ + P RG Y A R V + +VE+ S DEA+ +
Sbjct: 58 MPMHQARRLIGVTAVVLPP--RGVV----YGIASRRVFDTVRGLVPVVEQLSFDEAFAE 110
Score = 47 (21.6 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 905 TVQFHSNSINKGNGNADVSPMDTVDIIN 932
TV+F + G G+A P+DT DI N
Sbjct: 408 TVRFETRG--SGPGSARTFPVDTGDISN 433
>UNIPROTKB|F1S1Z7 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:CU464155 Ensembl:ENSSSCT00000005003 Uniprot:F1S1Z7
Length = 737
Score = 194 (73.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 68/241 (28%), Positives = 111/241 (46%)
Query: 2 TSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQ-YNTWKGGGIIAVNYEARHKGVTRHM 60
+SR+I +D+DCFY QVE NP L GKPL V Q Y+ ++ NYEAR GV + M
Sbjct: 61 SSRVIVHVDLDCFYAQVEMISNPELKGKPLGVQQKYH------VVTCNYEARKFGVKKLM 114
Query: 61 RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
+ +AK+ CP++ L V G+ D+++YR +V + + V + + D+
Sbjct: 115 KVRDAKEKCPQLVL-----VNGE-DLTRYRETSYKVTDRRDDIKHTVVHVAFVSLFWDIE 168
Query: 121 DVVH-ERMKSIGHIAASQLSNTFV--VGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLME 177
++V K ++ S + NT + + F + GV++ L D++ L+
Sbjct: 169 EMVFFSNYKLFSLVSCSHMFNTCILFINFIVGHQIYTFAGGGVLQLLS--IGDSERKLIS 226
Query: 178 NTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSS 237
N L A V + VLS+T +N + L G ++ +L SS
Sbjct: 227 N------LVSAQVFEVVCNSEVLSRTTTQFFNKQNNNYDIKSLGIGYKTAKRLEVLGISS 280
Query: 238 V 238
V
Sbjct: 281 V 281
Score = 41 (19.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 724 QSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCK 783
+ HL+K K + P T +SS+ S + +YL + ER++ +
Sbjct: 583 KDHLSKSKQISSVSPCE----PGTSGLNSSSSSYSSSQKDYSHYLDSSLKDERMSQGPKE 638
Query: 784 DETLTHGQVHPSV 796
+ +P+V
Sbjct: 639 SQGFYFSNTNPAV 651
>ASPGD|ASPL0000039840 [details] [associations]
symbol:AN3373 species:162425 "Emericella nidulans"
[GO:0000077 "DNA damage checkpoint" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:BN001306 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:VHVDCDA EnsemblFungi:CADANIAT00009669
HOGENOM:HOG000082709 Uniprot:C8VHQ1
Length = 612
Score = 143 (55.4 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 3 SRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV-NYEARHKGVTRHMR 61
S+ + +D D F+ VE P L P+AV G G++ NYEAR G M
Sbjct: 112 SQYVVHVDCDAFFAAVEELDRPELKTVPMAV-------GKGVLTTCNYEARKFGCRSGMA 164
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
AK+ CP++ +C +P + KY +E+ A+L+++ E ASIDEAY+++T
Sbjct: 165 SFVAKKLCPQL-IC-LPQ-----NYEKYTAKAQEIRAILAQYDPQFESASIDEAYLNITA 217
Query: 122 VVHER 126
E+
Sbjct: 218 YCREK 222
Score = 94 (38.1 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 192 VEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILP--QSSVSMLYANLSIKK 249
V +RA +L KT+ SAGIA N +AK+ +KP Q +P ++++ +L ++K
Sbjct: 230 VSRMRAEILEKTKISVSAGIAANAKIAKICSNRNKPNGQFRVPNEKNAIMEFMRDLPMRK 289
Query: 250 VRHLGGKLGDEVVETLQCSTMLELEKFSLKQ-LQSHFEEKTASWLYYIARGIDHEPVNAR 308
+ +G ++ + ++++ T ++ F + L F EK +L G+ +
Sbjct: 290 INGVG-RVFERELDSIGIKTCGDI--FPQRAYLAKLFGEKALHFLAQCYLGVGRTKIQPA 346
Query: 309 --LVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLT 352
KS+G + F ++ R++ + A E LE DL+
Sbjct: 347 ESYERKSVGTERTFHE---ISKREEFREKLWSCAQE----LEKDLS 385
Score = 40 (19.1 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 439 PQDHPEPMTSEHSSLPEQSTNHDS-KKRDKTL 469
PQ P+ + HS+ ++ + DS R K L
Sbjct: 578 PQLQPQAQPAPHSTRKRKTASRDSVDPRQKRL 609
Score = 37 (18.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 547 ESFNDKLVSIEREVEESVGK 566
E F +KL S +E+E+ + +
Sbjct: 367 EEFREKLWSCAQELEKDLSR 386
>UNIPROTKB|J9P5L3 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03511 CTD:51426
EMBL:AAEX03002157 RefSeq:XP_536321.2 Ensembl:ENSCAFT00000046862
GeneID:479180 KEGG:cfa:479180 Uniprot:J9P5L3
Length = 861
Score = 183 (69.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 108/438 (24%), Positives = 184/438 (42%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I IDMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYYARRFGVRAAMPGFIA 157
Query: 66 KQHCPEIELC-------RVPSVRGKADISKYR-NAGREVI--AVLSEFSNIVERASIDE- 114
K+ CP++ + R S K ++ Y N + A L+ ++ ER + E
Sbjct: 158 KRLCPQLIIVPPNFDKYRAVSTEVKEILADYDPNFLAMSLDEAYLNITKHLQERQNWPED 217
Query: 115 --AYIDLTDVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTD 172
Y T E K + + + D++ D + G G + +
Sbjct: 218 KRKYFIKTGNPLENDKPRKEVNKLREHERSISPLLFDDSPPDLQSQG-NPLQGNSEEEDN 276
Query: 173 TSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-S 231
++N+ F A +V+EIR + KT SAGIA N +LAK+ +KP Q
Sbjct: 277 PQTLQNSIVFG--TSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ 334
Query: 232 ILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
+LP M + +L I+KV +G K+ +++++ L T EL + + L S +T
Sbjct: 335 VLPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLSLLFSET- 390
Query: 291 SWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLE 348
SW ++ I+ G+ + KS+ + F + A Q L E+C L
Sbjct: 391 SWHHFLHISLGLGSTHLARDGERKSMSVERTF-SEISKAEEQ------YNLCQELCSELA 443
Query: 349 DDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPIS 408
DL + + +T+ + + +V + + +++ ++I ++ +++ A
Sbjct: 444 QDLQKEGLKGRTVTIKL-KNVNFEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDA---- 498
Query: 409 DLTPPLLF--LGLSASKF 424
D PL +G+ S F
Sbjct: 499 DFPHPLRLRLMGVRLSSF 516
Score = 49 (22.3 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLT-MENKKS 594
++D+ A E ++ +DK E S +IE+ +N S + E + +L+ E+ +
Sbjct: 704 TEDNPAKAESVDALSDKHSKEECASLPSKPFNIEKCCQNSSSTVSLEDIASLSRQESSQP 763
Query: 595 IKNECLSPVSS---KSKDLTNENL 615
+ PV + K+ DLT N+
Sbjct: 764 YLQALVCPVCNLEQKTSDLTLFNV 787
>UNIPROTKB|E2RAS5 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ EMBL:AAEX03002157 Ensembl:ENSCAFT00000014935
Uniprot:E2RAS5
Length = 871
Score = 183 (69.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 109/440 (24%), Positives = 187/440 (42%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I IDMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 111 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYYARRFGVRAAMPGFIA 165
Query: 66 KQHCPEIELC-------RVPSVRGKADISKYR-NAGREVI--AVLSEFSNIVERASIDE- 114
K+ CP++ + R S K ++ Y N + A L+ ++ ER + E
Sbjct: 166 KRLCPQLIIVPPNFDKYRAVSTEVKEILADYDPNFLAMSLDEAYLNITKHLQERQNWPED 225
Query: 115 --AYIDLTDVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTD 172
Y T E K + + + D++ D + G G + +
Sbjct: 226 KRKYFIKTGNPLENDKPRKEVNKLREHERSISPLLFDDSPPDLQSQG-NPLQGNSEEEDN 284
Query: 173 TSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-S 231
++N+ F A +V+EIR + KT SAGIA N +LAK+ +KP Q
Sbjct: 285 PQTLQNSIVFG--TSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ 342
Query: 232 ILPQSSVSMLYA-NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTA 290
+LP M + +L I+KV +G K+ +++++ L T EL + + L S +T
Sbjct: 343 VLPNRQAVMDFIKDLPIRKVSGIG-KVTEKMLKALGIITCTEL--YQQRALLSLLFSET- 398
Query: 291 SWLYY--IARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQE--LADEVCER 346
SW ++ I+ G+ + L S G K + T ++S ++ L E+C
Sbjct: 399 SWHHFLHISLGLG----STHLASSRDGERKSMSVER---TFSEISKAEEQYNLCQELCSE 451
Query: 347 LEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPP 406
L DL + + +T+ + + +V + + +++ ++I ++ +++ A
Sbjct: 452 LAQDLQKEGLKGRTVTIKL-KNVNFEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDA-- 508
Query: 407 ISDLTPPLLF--LGLSASKF 424
D PL +G+ S F
Sbjct: 509 --DFPHPLRLRLMGVRLSSF 526
Score = 49 (22.3 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLT-MENKKS 594
++D+ A E ++ +DK E S +IE+ +N S + E + +L+ E+ +
Sbjct: 714 TEDNPAKAESVDALSDKHSKEECASLPSKPFNIEKCCQNSSSTVSLEDIASLSRQESSQP 773
Query: 595 IKNECLSPVSS---KSKDLTNENL 615
+ PV + K+ DLT N+
Sbjct: 774 YLQALVCPVCNLEQKTSDLTLFNV 797
>UNIPROTKB|Q74CQ6 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 170 (64.9 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 76/277 (27%), Positives = 120/277 (43%)
Query: 135 ASQLSNTFVVGFGPDNNDEDARKAG-VMEWLGQ------VYSDTDTSLMENTEDFQELAI 187
A +L ++ G NN E R + + E LGQ V+S D + ++ T +
Sbjct: 64 AKRLCPELILVIG--NNREYTRISKLIFEMLGQFTPLVEVFS-IDEAFLDLTGSLRLFGR 120
Query: 188 AGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSI 247
A VI EI+A + + CS GIA NK+LAKL + KP +I+P +V+ L I
Sbjct: 121 ADVIAREIKARIRDRFGLTCSIGIAPNKLLAKLASDMQKPDGLTIIPPENVASLMKTTPI 180
Query: 248 KKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNA 307
+ + +G ++ ++ L ST +L FS K L HF A L + +GID PV
Sbjct: 181 RSLCGIGPST-EQRLKYLGISTCNDLGHFSSKILTRHFGAMGAR-LKQMGQGIDDSPVIP 238
Query: 308 RLVSKSIGCCKRFPGKTC-LATRQDVSHWIQELADEVCERLE------DDLTLNKRRAQL 360
+ + L + D+ ++ L++ V R +TL R A
Sbjct: 239 TTTEEEVKSVSHSTTLDHDLTNKDDIHKYLLMLSEMVGRRARRYKTKGKTVTLTIRYADF 298
Query: 361 LTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQV 397
T S QET + S I A L D ++++ +
Sbjct: 299 TTFS-RQETLPSPLNRSGDIYRAVTALLDTLQLTQPI 334
Score = 166 (63.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 46/117 (39%), Positives = 66/117 (56%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DM+ F+ VE + +PSL GKP+AV+ + I +YEAR GV M
Sbjct: 5 RTILHLDMNAFFASVEQQADPSLQGKPVAVI--GSGARTIITTASYEARAHGVGTGMTTH 62
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
EAK+ CPE+ L + + R ISK + +L +F+ +VE SIDEA++DLT
Sbjct: 63 EAKRLCPELILV-IGNNREYTRISKL------IFEMLGQFTPLVEVFSIDEAFLDLT 112
Score = 39 (18.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 913 INKGNGNADVSPMDTVDIINTIADSSTVDSAINIAD 948
+ +G ++ V P T + + +++ S+T+D + D
Sbjct: 227 MGQGIDDSPVIPTTTEEEVKSVSHSTTLDHDLTNKD 262
>TIGR_CMR|GSU_1616 [details] [associations]
symbol:GSU_1616 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 170 (64.9 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 76/277 (27%), Positives = 120/277 (43%)
Query: 135 ASQLSNTFVVGFGPDNNDEDARKAG-VMEWLGQ------VYSDTDTSLMENTEDFQELAI 187
A +L ++ G NN E R + + E LGQ V+S D + ++ T +
Sbjct: 64 AKRLCPELILVIG--NNREYTRISKLIFEMLGQFTPLVEVFS-IDEAFLDLTGSLRLFGR 120
Query: 188 AGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSI 247
A VI EI+A + + CS GIA NK+LAKL + KP +I+P +V+ L I
Sbjct: 121 ADVIAREIKARIRDRFGLTCSIGIAPNKLLAKLASDMQKPDGLTIIPPENVASLMKTTPI 180
Query: 248 KKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNA 307
+ + +G ++ ++ L ST +L FS K L HF A L + +GID PV
Sbjct: 181 RSLCGIGPST-EQRLKYLGISTCNDLGHFSSKILTRHFGAMGAR-LKQMGQGIDDSPVIP 238
Query: 308 RLVSKSIGCCKRFPGKTC-LATRQDVSHWIQELADEVCERLE------DDLTLNKRRAQL 360
+ + L + D+ ++ L++ V R +TL R A
Sbjct: 239 TTTEEEVKSVSHSTTLDHDLTNKDDIHKYLLMLSEMVGRRARRYKTKGKTVTLTIRYADF 298
Query: 361 LTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQV 397
T S QET + S I A L D ++++ +
Sbjct: 299 TTFS-RQETLPSPLNRSGDIYRAVTALLDTLQLTQPI 334
Score = 166 (63.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 46/117 (39%), Positives = 66/117 (56%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
R I +DM+ F+ VE + +PSL GKP+AV+ + I +YEAR GV M
Sbjct: 5 RTILHLDMNAFFASVEQQADPSLQGKPVAVI--GSGARTIITTASYEARAHGVGTGMTTH 62
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
EAK+ CPE+ L + + R ISK + +L +F+ +VE SIDEA++DLT
Sbjct: 63 EAKRLCPELILV-IGNNREYTRISKL------IFEMLGQFTPLVEVFSIDEAFLDLT 112
Score = 39 (18.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 913 INKGNGNADVSPMDTVDIINTIADSSTVDSAINIAD 948
+ +G ++ V P T + + +++ S+T+D + D
Sbjct: 227 MGQGIDDSPVIPTTTEEEVKSVSHSTTLDHDLTNKD 262
>CGD|CAL0001748 [details] [associations]
symbol:orf19.4412 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] InterPro:IPR001126 InterPro:IPR012112
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PIRSF:PIRSF036573 PROSITE:PS50173 InterPro:IPR001357 CGD:CAL0001748
Pfam:PF00533 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
EMBL:AACQ01000179 EMBL:AACQ01000178 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03515 RefSeq:XP_711860.1 RefSeq:XP_723600.1
ProteinModelPortal:Q59Q77 STRING:Q59Q77 GeneID:3646519
GeneID:3646539 KEGG:cal:CaO19.11890 KEGG:cal:CaO19.4412
Uniprot:Q59Q77
Length = 1113
Score = 112 (44.5 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 35/123 (28%), Positives = 51/123 (41%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGD 63
++I ID DCF+ C P L + + K I + NY AR GV M
Sbjct: 390 KVIMHIDFDCFFATASCLKRPDLDSSKHPIAVSHGGKTSDIASCNYVARKYGVKNGMWLM 449
Query: 64 EAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVL--SEFSNIVERASIDEAYIDLTD 121
+A + CP++ L +P + Y E L S+F + + SIDE +D T
Sbjct: 450 QATKLCPDLIL--LPY-----EFESYEKFSSEFYNYLLTSKFFDSIFPVSIDEVLVDATS 502
Query: 122 VVH 124
H
Sbjct: 503 YCH 505
Score = 94 (38.1 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 73/332 (21%), Positives = 137/332 (41%)
Query: 185 LAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYAN 244
+++ + IR V T S G + N +LAKL KP Q L + +
Sbjct: 512 VSLVNELATRIRKDVFKLTNCPVSVGASTNVLLAKLALRKAKPNGQFYL-FDDIEKFLES 570
Query: 245 LSIKKVRHLGGKLGDEVVETLQCST--MLELEKFSLKQLQSHFEEKTASWLYYIARGIDH 302
+ IK + G + +++ +Q S + ++ S ++L EKT + L+ ARG+D
Sbjct: 571 IYIKDLPGFGRGILEKLNSEIQSSNPQIKDVVTISKQRLVQLLGEKTGTKLFEYARGMDE 630
Query: 303 EPVN-------ARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLED------ 349
+ A L KS+ F + T +++ ++ L+ E+ +RL
Sbjct: 631 TSIEIDTNNPEAVLGRKSVSVDVNFGIR--FDTVEELDDFLMRLSRELYQRLVSLGICGS 688
Query: 350 DLTLN-KRRAQLLTVSFTQETD-GKVNSCSRSIALASYKLQD--IVEVSMQVINKTNSAP 405
LTL +RA+ +++ + G+ + ++S L D I+ ++V+ + + P
Sbjct: 689 SLTLKLAKRAEGASINPPKFLGMGRCDFVNKSSKLG-VPTNDWGIIGNEVKVLYRMVNIP 747
Query: 406 PISDLTPPLLFLGLSASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKR 465
+ +L + ++ SK S +Q P E L + DSK
Sbjct: 748 -VKELRG----ISITISKLVDAEGVKSNKQMRLPFKKAESNALSVRDLKQLQKMSDSKDN 802
Query: 466 DKTLLNFNQQTPFQLALNR--IERKLIDKFKS 495
L F++Q+P + +N+ I + D FKS
Sbjct: 803 KSQKLIFSKQSPEKRHVNKVLISHEFAD-FKS 833
Score = 64 (27.6 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 544 EDEESFNDKLVS-IEREVEESVGKDIE--ESLKNVSDVLFNEKVENLTMENKKSIKNECL 600
E+ +S++ +++ + ++ESV +D+E E +K V +K+ +ENKK NE
Sbjct: 921 EESQSYDTSVLNELPSSIKESVIRDVEYKEKIKKFDLVSMRDKLAQ-KLENKKVPVNEVT 979
Query: 601 SP-VSSKSK 608
S + S+ K
Sbjct: 980 SDWLKSQEK 988
Score = 45 (20.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 34/180 (18%), Positives = 75/180 (41%)
Query: 727 LNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDET 786
L + + ++ T ++G P + K E+ RRK R+ + S +
Sbjct: 854 LRRRGMLSEKSTPTKGKTYLQQLLPTQAGNAPKYIRVTESPQRRKSPRKSRSETSSPIKV 913
Query: 787 LTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPI 846
V+ ++ ++L E+ SSI+ +E + + D+ R+ LA +
Sbjct: 914 TKQEPVYEESQSYDTSVLNELPSSIKESVIRDVEYKEKIK-KFDLVSMRDK----LAQKL 968
Query: 847 KDTESTGPSNVISTE---SNEVIDQTKIRDVSSSDHSQMTSATKADFIKES---GDPNNE 900
++ + P N ++++ S E +++T + +++ S D++K S G P+ E
Sbjct: 969 ENKKV--PVNEVTSDWLKSQEKLNKTPLFLNEQLKDNEL-SVKLDDWVKSSLLQGGPHEE 1025
>UNIPROTKB|Q71Y46 [details] [associations]
symbol:dinB "DNA polymerase IV" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:YP_014591.1 ProteinModelPortal:Q71Y46 STRING:Q71Y46
GeneID:2798339 KEGG:lmf:LMOf2365_1998 PATRIC:20325291
Uniprot:Q71Y46
Length = 356
Score = 164 (62.8 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 47/146 (32%), Positives = 75/146 (51%)
Query: 2 TSRIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMR 61
TSR I IDMD FY VE + +P GKPL ++ + K G + +YEAR GV M
Sbjct: 3 TSRKIIHIDMDAFYASVEQRDHPEFRGKPL-IIGGDPNKRGVVATCSYEARKFGVHSAMP 61
Query: 62 GDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTD 121
+A + CP + G +++ Y ++ + S +++I+E S+DEAY+D+T+
Sbjct: 62 TRQAAKLCPNGIF-----IHG--NMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTE 114
Query: 122 VVHERMKSIGHIAASQLSNTFVVGFG 147
+ MKS + A ++ T G
Sbjct: 115 N-KKGMKS-ATMVAREIQQTIYQELG 138
Score = 37 (18.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 637 TPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISN 690
T ++ + N + N T + + L+ R T +S I T +KP N
Sbjct: 297 TTITKRLTLNEYTNDTSQIYQAAALLLRESYTGQDSIRLIGLTVTNLKPVYFEN 350
>DICTYBASE|DDB_G0302588 [details] [associations]
symbol:DDB_G0302588 "RanBP2-type zinc finger"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001876 PROSITE:PS01358 SMART:SM00547
dictyBase:DDB_G0302588 GO:GO:0008270 EMBL:AAFI02000003
GO:GO:0005622 RefSeq:XP_002649209.1 EnsemblProtists:DDB0302589
GeneID:8616202 KEGG:ddi:DDB_G0302588 OMA:VKFESPA Uniprot:C7FZW3
Length = 3566
Score = 163 (62.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 107/551 (19%), Positives = 224/551 (40%)
Query: 420 SASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTN--HDSKKRDKTLLNFNQQTP 477
S SK SP S+P+ + K ++ E E L ++ +++K+D+ N ++
Sbjct: 2644 SPSKPSPSPSNPTFESINKEKESVEDKNQEKDELKDEKDELKDENEKKDE---NEKKEET 2700
Query: 478 FQLALNRIERKLIDKFKSHIES--KLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTH 535
+ + + + +++ K IES K + ++++V D E+ K E ++ + +
Sbjct: 2701 VESDKEKEKEETLEETKQSIESDKKEEKKEEKLEEIVQSD-KEKEKEETLEETKQSIESD 2759
Query: 536 SKDSNASDEDEESFNDKLVSI-EREVEESVGKDIEESLKN-VSDVLFNEKVENLTMENKK 593
K+ DE EE + + S E+E EE++ ++ ++S+++ + EK+E + +K+
Sbjct: 2760 KKE----DEKEEKLEEIVESDKEKEKEETL-EETKQSIESDKKEDEKEEKLEEIVQSDKE 2814
Query: 594 SIKNECLSPV-------SSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKN 646
K E L + S K +D + ET+ P S ++ K K+
Sbjct: 2815 KEKEETLEEIKQSIESESDKKEDEMEKVFSRIEETI-KPNFFSTKEDEEEKGDELKDEKD 2873
Query: 647 VFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQ-VKPENISNGNNSDNKTDDEDSPQ 705
EN+ ++S E K + T+ + + I +++ K E + SD + + E++ +
Sbjct: 2874 ENENE-IESDNE----KEKEETLEETKQSIESDKKEDEKEETLEEIVQSDKEKEKEETLE 2928
Query: 706 VITKPIGSISM---RKYETTRQSHL-NKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSY 761
+PI + ++ ET + H+ N+ K + + +T E K
Sbjct: 2929 ETKQPIETDKKEDEKENETEPEKHIDNEKKDENEKKNEDEKKEEETVESDQEKEKEETKQ 2988
Query: 762 SFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIET 821
S +++ E E+ S+ +ET+ + + E+ +S +D ET
Sbjct: 2989 SIESESDKKEDEMEKEFSRI--EETIKPNFFSTNKDEKDQETKEDNGNSDNNIDQ---ET 3043
Query: 822 NAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQT-KIRDVSSSDHS 880
+ +I E K +P S P +S + DQT K+ +
Sbjct: 3044 KENEKASKEIQDEEEEKEKEQEEPNLSLLSMDPVRCMSLSGLPIFDQTVKVEE------- 3096
Query: 881 QMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTI-ADSST 939
+ ++ K+ GD +++ T++ S+S + T+ + A SS
Sbjct: 3097 ------EIEYEKDDGDDDDD--DETIEKDSSSTTTSTTTTSTTTASTLTPQKPLFAPSSF 3148
Query: 940 VDSAINIADPT 950
+ ++ PT
Sbjct: 3149 APPSFSLPTPT 3159
Score = 61 (26.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 62/283 (21%), Positives = 113/283 (39%)
Query: 167 VYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKVLA--KLVCGL 224
V ++ L E T DFQ + + E+ + + + + + + +L+ K
Sbjct: 60 VLKESQKELKEITIDFQTITKQYDLAEQSLQSAIKSYPDNLNFLLKNINLLSINKKYYEF 119
Query: 225 HKPQKQSILPQSSVSMLYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSH 284
K K S + + Y N IK++ ++ K E VE +Q +TML + S L
Sbjct: 120 FKSIKDSKIKYQR-DLKYLNFIIKQIDNVAIKAIKESVEEIQANTMLLNDSMSYLNL--- 175
Query: 285 FEEKTASWLYYIARGIDHEPVNARLVSKSIGCCKR---FPGKTCLATRQDVSHWIQELAD 341
KT L YI R H + + S SI + G Q ++ ++E
Sbjct: 176 ITLKTEI-LDYIIRATIHNNLVSSNSSGSIDDIDDIGDYYGNNNF--NQKLTRQLKEFKK 232
Query: 342 EVCERLEDDLTLNKRRAQLLTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVIN-K 400
+V +++ + ++L K + +T+S + E + + I L Y+ +I ++ + N K
Sbjct: 233 QV-KKIRELVSLYK---EPITLSPSLEEFNERYFFYKGI-LIDYEYSNISNITTSISNIK 287
Query: 401 TNSAPPISDLTPPL---LFLGLSASKFSP---LGSHPSIQQFF 437
PP L + S++ P L S S Q F+
Sbjct: 288 NRQNPPFKSYLKSLQKDITKSSSSNMLEPIVKLSSEVSRQLFY 330
>UNIPROTKB|D4A662 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173
SMART:SM00734 RGD:620058 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
IPI:IPI00951859 Ensembl:ENSRNOT00000065248 ArrayExpress:D4A662
Uniprot:D4A662
Length = 434
Score = 164 (62.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 6 IALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEA 65
I +DMD FY VE + NP L KP+AV + + NY AR GV M G A
Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSMSM-----LATSNYHARRFGVRAAMPGFIA 156
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHE 125
K+ CP++ + VP + KYR +EV +L+E+ S+DEAY+++T + E
Sbjct: 157 KRLCPQLII--VPP-----NFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQE 209
Query: 126 R 126
R
Sbjct: 210 R 210
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1009 GRPSKLNSFKNSENFKKLKTIDQFFK 1034
GR +K ++ K ++ T+D FFK
Sbjct: 409 GRKTKGSTSKRTKPRDPRHTLDGFFK 434
>FB|FBgn0035150 [details] [associations]
symbol:Rev1 "Rev1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0017125 "deoxycytidyl
transferase activity" evidence=ISS;NAS] [GO:0019985 "translesion
synthesis" evidence=NAS] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 EMBL:AE014296 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0010569 GO:GO:0003887 GO:GO:0019985 Gene3D:3.30.1490.100
SUPFAM:SSF100879 GO:GO:0017125 GeneTree:ENSGT00530000062942
KO:K03515 OMA:TIPYDFD CTD:51455 FlyBase:FBgn0035150 EMBL:AB049435
RefSeq:NP_612047.1 UniGene:Dm.2203 SMR:Q9W0P2 IntAct:Q9W0P2
STRING:Q9W0P2 EnsemblMetazoa:FBtr0072557 GeneID:38079
KEGG:dme:Dmel_CG12189 UCSC:CG12189-RA InParanoid:Q9W0P2
GenomeRNAi:38079 NextBio:806885 Uniprot:Q9W0P2
Length = 995
Score = 142 (55.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 44/178 (24%), Positives = 86/178 (48%)
Query: 172 DTSLMENTEDFQELAI-AGVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ 230
D +E T+ EL + V +R V SKT CSAG+A NK+LA++ KP Q
Sbjct: 421 DEMFVELTDLAHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAKPNGQ 480
Query: 231 SILPQSSVSMLY-ANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKT 289
+L S+ + Y A +S+ + +G + ++ + + +++ +L++++ +K
Sbjct: 481 FLLDSSNDILAYMAPMSLDLLPGVGSSISHKLKQA-GLNNCGDVQNTTLEKMEKVLGKKL 539
Query: 290 ASWLYYIARGIDHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERL 347
L+ RGID P+ + K++ F + + ++ +L++EV +RL
Sbjct: 540 GQNLFQNCRGIDDRPLAYEQIRKTVSAEMNFGIR--FTNSVECEQFLCQLSEEVTKRL 595
Score = 107 (42.7 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 44 IIAVNYEARHKGVTRHMRGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEF 103
I + +YEAR KG+ M +A + CPE++ +P D Y+ + ++++
Sbjct: 359 IASCSYEAREKGIRNGMFVGQALKLCPELKT--IPY-----DFEGYKEVAFTLYDTVAQY 411
Query: 104 SNIVERASIDEAYIDLTDVVHER----MKSIGHIAASQLSNT 141
+ +E S DE +++LTD+ HE M + H+ S T
Sbjct: 412 TLNIEAVSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSKT 453
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGG 42
R + IDMDCF+ V + P L G P+AV KGG
Sbjct: 273 RYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHS---KGG 308
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 824 MTRIRDDIHLARENNTKFLADPIKDTESTGP 854
+TR+ D + +ENN K + + + P
Sbjct: 673 LTRLEDANEVRKENNIKEMFGKMSEMRKDKP 703
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 547 ESFNDKLVS-IEREVEESVGKDIEESLKNVSDVLFNEKVENL 587
+++ D L + RE E D++ LK VS ++ N++++++
Sbjct: 899 DNYKDLLNDWVSRE-EVPKPNDVDLILKQVSRMIKNDQLDHV 939
>UNIPROTKB|F1N787 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 GO:GO:0009411 GO:GO:0000287 GO:GO:0003684
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
GeneTree:ENSGT00530000062942 OMA:YRFCRGL EMBL:DAAA02030163
EMBL:DAAA02030164 EMBL:DAAA02030165 EMBL:DAAA02030166
EMBL:DAAA02030167 EMBL:DAAA02030168 IPI:IPI00731687
Ensembl:ENSBTAT00000061518 Uniprot:F1N787
Length = 1202
Score = 154 (59.3 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 102/455 (22%), Positives = 177/455 (38%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEAKQH 68
+DMDCF+ V + P L GKP+AV N +G G + G + E + +
Sbjct: 371 VDMDCFFVSVGIRNRPDLKGKPVAVTS-N--RGTGRAPLR-----PGANPQL---EWQYY 419
Query: 69 CPEIELCRVPSVRGKA-DISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERM 127
+I +RGKA +I + A ++ +++ +A I + V
Sbjct: 420 QNKI-------LRGKAAEIPDPSTWESQDSAQINGIDSVLSKAEIASCSYEARQVGIRNG 472
Query: 128 KSIGHIAASQLS-NTFVVGFGPDNNDEDARKAGVMEWLGQVYSDT-----DTSLMENTED 181
G+ A QL N V + E A+ + E L D D +L++ TE
Sbjct: 473 MYFGY--AKQLCPNLQAVPYDFHAYKEVAQT--MYETLASYTHDIEAVSCDEALVDITEI 528
Query: 182 FQELAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSM 240
E + +R + +T+ S GI N +LA++ KP Q L V
Sbjct: 529 LAETRLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDD 588
Query: 241 LYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGI 300
+ + +G + +++ +L T +L+ ++ +LQ F KT LY RG+
Sbjct: 589 FIRGQLVTNLPGVGRSMESKLM-SLGIRTCGDLQYMTMAKLQKEFGSKTGQMLYRFCRGL 647
Query: 301 DHEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQL 360
D PV KSI + + + ++ ++ L++E+ RLE KR
Sbjct: 648 DDRPVRTEKERKSISAEINYGIR--FSQPKEAEAFLLSLSEEIQRRLEAVGMKGKR---- 701
Query: 361 LTVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLF-LGL 419
LT+ G + S + + DI ++ + T+SA I T + + L
Sbjct: 702 LTLKIMVRKPG---APVESAKYGGHGICDITTRTVTLDQATDSAKLIGTATLNMFHTMKL 758
Query: 420 SASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSSLP 454
S + +G H + Q +P S ++ P
Sbjct: 759 SIADMRGVGIH--VNQLVPANPNPPACLSHPAAQP 791
>UNIPROTKB|P04152 [details] [associations]
symbol:umuC species:83333 "Escherichia coli K-12"
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IEP] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000012 "single strand break repair"
evidence=IMP] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0009432 "SOS response" evidence=IEA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0016021 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003684 GO:GO:0000012 GO:GO:0009432
GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 InterPro:IPR025188
Pfam:PF13438 EMBL:M10107 EMBL:M13387 PIR:E64864 RefSeq:NP_415702.1
RefSeq:YP_489451.1 ProteinModelPortal:P04152 SMR:P04152
DIP:DIP-11090N IntAct:P04152 PRIDE:P04152
EnsemblBacteria:EBESCT00000002958 EnsemblBacteria:EBESCT00000014512
GeneID:12932822 GeneID:946359 KEGG:ecj:Y75_p1156 KEGG:eco:b1184
PATRIC:32117614 EchoBASE:EB1049 EcoGene:EG11056
HOGENOM:HOG000252172 KO:K03502 OMA:SPRYTTQ ProtClustDB:PRK03609
BioCyc:EcoCyc:EG11056-MONOMER BioCyc:ECOL316407:JW1173-MONOMER
BioCyc:MetaCyc:EG11056-MONOMER Genevestigator:P04152 Uniprot:P04152
Length = 422
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 57/178 (32%), Positives = 78/178 (43%)
Query: 5 IIALIDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDE 64
+ AL D++ FY E P L GKP+ V+ N G +IA N EA+ GV GD
Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKM---GDP 54
Query: 65 AKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVH 124
+ C V ++ Y + V++ L E S VE SIDEA+ DLT V +
Sbjct: 55 WFKQKDLFRRCGVVCFSSNYEL--YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112
Query: 125 ER-MKSIGH-IAASQLSNTFV-VGFGPDNNDEDARKAG--VMEWLGQVYSDTDTSLME 177
R + G I A+ L T + VG G A+ A +W Q D S +E
Sbjct: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170
>DICTYBASE|DDB_G0270444 [details] [associations]
symbol:DDB_G0270444 "protein kinase, CMGC group"
species:44689 "Dictyostelium discoideum" [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0270444 GO:GO:0005524 EMBL:AAFI02000005
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:Q9WZF7 RefSeq:XP_646809.1
ProteinModelPortal:Q55BM1 EnsemblProtists:DDB0230126 GeneID:8617795
KEGG:ddi:DDB_G0270444 InParanoid:Q55BM1 OMA:NIPVHEN Uniprot:Q55BM1
Length = 1360
Score = 151 (58.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 90/476 (18%), Positives = 181/476 (38%)
Query: 374 NSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISD-----LTPPLLFLGLSASKFSPLG 428
N S +I L Y V + N + SD LT L F+
Sbjct: 890 NMTSDAIQLLQYAASLPVPFEDSIDNLRSHCSLASDSALDLLTQMLQFVPHKRISIEQAL 949
Query: 429 SHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALN-RIER 487
SHP I K Q + + +Q K T ++ N+Q N +I +
Sbjct: 950 SHPFILNLPKQQQQQQQQKQQQQQQQQQQQEIIPKDDSLTDISSNKQETVVYDANIQINQ 1009
Query: 488 K-LIDKFKSH-IESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKD--SNASD 543
+ LI K K + I+ ++D +++ + D+ E+I+ E +++ ++ SK+ A +
Sbjct: 1010 EDLISKIKENEIQKEIDFKENQINEEIKEDVKEEIEEDIKEEIKEEIKEESKEVQEEAKE 1069
Query: 544 EDEESFNDKLVSIEREVEESVGKDI-EESLKN-VSDVLFNEKVENLTMENKKSIKNECLS 601
E +E + ++ E++E V +I EE +K + + + E E + ENK I+
Sbjct: 1070 EIKEEIQIETQEVKEEIKEEVQVEIKEEKIKEEIKEEIKEETQEEIKEENKDEIQETIKE 1129
Query: 602 PVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELP- 660
V + K+ E + + + + + + + S+ + KEE+
Sbjct: 1130 EVQVEIKEEIKEETQEEIKEILNEVQVKEE---VKEEIQEEVSQETLSEIQEEVKEEIQE 1186
Query: 661 -LVKRVDNTIPNSF--EFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMR 717
+ + V I N E R ++K E N+ +E ++ + I
Sbjct: 1187 DIKEEVKEEIQNEIREEIQNEIREEIKEEIKKVSEEIQNEIQEEVKEEIQNE----IQEE 1242
Query: 718 KYETTRQSHLN-KPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERER 776
+ +T ++ K ++ ++ T +G DT S +K S E + +++ +
Sbjct: 1243 QQDTIKEEIQEIKQEIISERDTNQEGEISDTIV---SDSKEADS--IIEGPVTLERDNKN 1297
Query: 777 LNSKSCKDETLTHG-QVHPSVETNTHTILEEVTSSIETVD-NGSIETNAMTRIRDD 830
+ + + + +V +E +EE E ++ IE ++ DD
Sbjct: 1298 ASDHDDEQQFVEEEIEVEEEIEVEEEIEVEEEIEVEEEIEVEEEIEVEEEIQVEDD 1353
>UNIPROTKB|P63987 [details] [associations]
symbol:dinB2 "DNA polymerase IV 2" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842581 GO:GO:0003887 eggNOG:COG0389
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 PIR:A70649 RefSeq:NP_217572.1 RefSeq:NP_337660.1
RefSeq:YP_006516517.1 ProteinModelPortal:P63987 SMR:P63987
EnsemblBacteria:EBMYCT00000003933 EnsemblBacteria:EBMYCT00000069414
GeneID:13317860 GeneID:887519 GeneID:923303 KEGG:mtc:MT3142
KEGG:mtu:Rv3056 KEGG:mtv:RVBD_3056 PATRIC:18128668
TubercuList:Rv3056 OMA:IIAHIDI ProtClustDB:PRK03352 Uniprot:P63987
Length = 346
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/213 (27%), Positives = 95/213 (44%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKKV 250
+ EEIR +LS+T CS GI+ NK AK+ GL KP L ++ + + +++ +
Sbjct: 128 VAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEAL 187
Query: 251 RHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEPVNARL- 309
+G K + + L +T+ +L L S F +TA WL G D E V+A+
Sbjct: 188 WGVGPKTTKRLAK-LGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTE-VSAQAW 245
Query: 310 VSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVC-ERLEDDLTLNKRRAQLLTVSFTQE 368
V +S FP L R ++ + ELA E + T+ + + T +F
Sbjct: 246 VPRSRSHAVTFPRD--LTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTR 303
Query: 369 TD-GKVNSCSRS---IALASYKLQDIVEVSMQV 397
T K+ + S I A+ + D+ E+ V
Sbjct: 304 TKIRKLQAPSTDPDVITAAARHVLDLFELDRPV 336
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 57/194 (29%), Positives = 82/194 (42%)
Query: 4 RIIALIDMDCFYCQVECKLNPSLHGKPLAVVQYN---TWKGGGIIAVNYEARHKGVTRHM 60
R I +D+D F VE +P L G P+ +V N T + +YEAR GV M
Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPV-IVGGNGDPTEPRKVVTCASYEARAYGVRAGM 65
Query: 61 RGDEAKQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
A + CPE +PS + + Y A EV+A+L + VE DEAY+ +
Sbjct: 66 PLRTAARRCPEATF--LPS-----NPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVA 118
Query: 121 ----DVVHERMKSIGHIAASQLSNTFVVGFGPDNNDEDARKAGVMEWLGQVYSDTDTSLM 176
D E + I + SQ + +G DN G+ + G +Y TD + M
Sbjct: 119 PGTPDDPIEVAEEIRKVILSQTGLSCSIGIS-DNKQRAKIATGLAKPAG-IYQLTDANWM 176
Query: 177 ENTEDFQELAIAGV 190
D A+ GV
Sbjct: 177 AIMGDRTVEALWGV 190
>RGD|1306715 [details] [associations]
symbol:Rev1 "REV1, polymerase (DNA directed)" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA;ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=IEA;ISO] [GO:0042276
"error-prone translesion synthesis" evidence=IEA;ISO]
InterPro:IPR001126 InterPro:IPR012112 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 InterPro:IPR001357 Pfam:PF00533 RGD:1306715
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:CH473965 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03515 CTD:51455 OrthoDB:EOG4GF3DF IPI:IPI00951348
RefSeq:NP_001101683.1 UniGene:Rn.94641 Ensembl:ENSRNOT00000067197
GeneID:316344 KEGG:rno:316344 UCSC:RGD:1306715 NextBio:670745
Uniprot:D3ZRU9
Length = 1119
Score = 148 (57.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 102/452 (22%), Positives = 174/452 (38%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEAKQH 68
+DMDCF+ V + P L GKP+AV N +G G + A + ++ + K
Sbjct: 420 VDMDCFFVSVGIRNRPDLKGKPVAVTS-N--RGTGRAPLRPGANPQLEWQYYQNKLLKGK 476
Query: 69 CPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMK 128
+I P D S + N A + +++ +A I + V +
Sbjct: 477 AADI-----P------DSSVWENQDS---AQTNGIDSVLSKAEIASCSYEARQVGIKNGM 522
Query: 129 SIGHIAASQLS-NTFVVGFGPDNNDEDARKAGVMEWLGQ-VYS----DTDTSLMENTEDF 182
GH A QL N V + E A+ + E L +S D +L++ T+
Sbjct: 523 FFGH--AKQLCPNLQAVPYDFHACREVAQ--ALYETLASYTHSIEAVSCDEALIDVTDIL 578
Query: 183 QELAIAGV-IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSML 241
E ++ +R + +KTQ S GI N +LA++ KP Q L V
Sbjct: 579 AETKLSPEEFAAALRMEIKNKTQCAASVGIGSNILLARMATKKAKPDGQYHLQPDEVDDF 638
Query: 242 YANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGID 301
+ + +G + ++ +L T +L+ ++ +LQ F KT LY RG+D
Sbjct: 639 IRGQLVTSLPGVGRSMESKLA-SLGIKTCGDLQCLTMAKLQKEFGPKTGQMLYRFCRGLD 697
Query: 302 HEPVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLL 361
PV KS+ + G R+ ++ L+ E+ RLE KR L
Sbjct: 698 DRPVRTEKERKSVSAEINY-GIRFTQPRE-AEAFLLSLSGEIQSRLEAAGMKGKR----L 751
Query: 362 TVSFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLF-LGLS 420
T+ G ++ + + D + ++ + T+SA I T + + L+
Sbjct: 752 TLKIMVRKPGAPIETAK---FGGHGICDNIARTVTLDQATDSAKIIGKATLNMFHTMKLN 808
Query: 421 ASKFSPLGSHPSIQQFFKPQDHPEPMTSEHSS 452
S +G + Q HP +S S+
Sbjct: 809 ISDMRGVGIQ--VHQLVPANLHPSTCSSRPSA 838
>FB|FBgn0037836 [details] [associations]
symbol:CG14692 species:7227 "Drosophila melanogaster"
[GO:0008603 "cAMP-dependent protein kinase regulator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0032027 "myosin light chain binding" evidence=RCA]
InterPro:IPR000048 InterPro:IPR003117 Pfam:PF00612 Pfam:PF02197
PROSITE:PS50096 SMART:SM00015 SMART:SM00394 EMBL:AE014297
GO:GO:0007165 GO:GO:0008603 eggNOG:NOG12793 SUPFAM:SSF47391
RefSeq:NP_650019.4 ProteinModelPortal:Q9VGW4 SMR:Q9VGW4
IntAct:Q9VGW4 MINT:MINT-328162 GeneID:41298 KEGG:dme:Dmel_CG14692
UCSC:CG14692-RB FlyBase:FBgn0037836 InParanoid:Q9VGW4
OrthoDB:EOG4B8GTZ GenomeRNAi:41298 NextBio:823185 Bgee:Q9VGW4
Uniprot:Q9VGW4
Length = 2743
Score = 152 (58.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 99/470 (21%), Positives = 182/470 (38%)
Query: 458 TNHDSKKRDKTLL--NFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGD 515
T K +K LL + + + +++ E K ++ + + LDS KL G+
Sbjct: 953 TEKTDLKNEKHLLASHISVTSSGDISIRESETKHVENREEMASTNLDSDQVENMKLE-GE 1011
Query: 516 ISEQIKNIAAENVRKYLRT-----HSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEE 570
I Q+K + ++ K T H++D S + +ES D + + E++ +E
Sbjct: 1012 IG-QLKTVFEQSEEKTSPTKSESLHAEDRKISGKSKESLEDAGENDRSTLLENLPSSEKE 1070
Query: 571 SLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSD 630
+ ++ + EK E+ +++ K S E + + KS + + + + PS S+
Sbjct: 1071 NSTSLDENPLPEK-ESTSLDEKPSSGTEKSTSLDEKSS--SEKEKSTSLDEKPS----SE 1123
Query: 631 RDIHTS---TPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPEN 687
++ TS TP K + + K KE L ++ + S + + +
Sbjct: 1124 KEKSTSLDETPSSEKENSTSLDEKPSPEKESTSLDEKPSSGTEKS---TSLDEKSSSEKE 1180
Query: 688 ISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDT 747
S + ++ E S + +P S K D S G T
Sbjct: 1181 KSTSLDEKPSSEKEKSTSLNERP-SSEKENSTSLVENPSPEKESTSLD-EKPSSGTEKST 1238
Query: 748 HEPPNSSNKRGKSYSFFENYLRRKKERERLNSK-SCKDETLTHGQVHPSVETNTHTILE- 805
N S+++ KS S E K+ + K S + E T PS E T L+
Sbjct: 1239 SLDENPSSEKEKSTSLNERPSSEKENSTSQDEKPSSETEKSTSLDEKPSSEKEKSTSLDG 1298
Query: 806 ----EVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTG----PSNV 857
E S +N S E T + + +EN+T + +P + EST PS+
Sbjct: 1299 KPSSEKEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSLVENPSPEKESTSLDEKPSS- 1357
Query: 858 ISTESNEVIDQTKIRDVSSSDH-SQMTSATKADFIKESGDPNNEMCKSTV 906
TE + +D+ + S ++ S+ K + + P++E KST+
Sbjct: 1358 -GTEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSQDEKPSSEKEKSTL 1406
Score = 142 (55.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 104/473 (21%), Positives = 191/473 (40%)
Query: 451 SSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDK 510
SSL E S ++KK K++ +T ++ L I D K +I+ ++ DK
Sbjct: 832 SSLAEDSKMPEAKKESKSIDEL--ETTKEV-LEDIIHSETDLSKQNIKENVEE----TDK 884
Query: 511 LVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESV-GKDIE 569
D +++ EN++ ++ +++ E E L+S ++ + S+ K
Sbjct: 885 PQSDDSPKEL-----ENLKDKIKMLTQEEVTPIEPESLETKGLLSTDKNDKNSLFSKTNS 939
Query: 570 ESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTF--ETLPSPIL 627
E N S + ++ E ++N+K + +S SS + H E + S L
Sbjct: 940 EENNNESQNV-DDITEKTDLKNEKHLLASHISVTSSGDISIRESETKHVENREEMASTNL 998
Query: 628 TSDRDIHTSTPCRRKGSKNVFEN---KTLKSKEELPLV--KRVDNTIPNSFEFITYTRRQ 682
SD+ + K VFE KT +K E +++ S E R
Sbjct: 999 DSDQVENMKLEGEIGQLKTVFEQSEEKTSPTKSESLHAEDRKISGKSKESLEDAGENDRS 1058
Query: 683 VKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQG 742
EN+ + + +N T +++P + K S+ + T +S K ++ +
Sbjct: 1059 TLLENLPS-SEKENSTSLDENP-LPEKESTSLDEKPSSGTEKSTSLDEK-----SSSEKE 1111
Query: 743 NNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHT 802
+ E P+S + KS S E K+ L+ K ++ T PS T T
Sbjct: 1112 KSTSLDEKPSSEKE--KSTSLDETPSSEKENSTSLDEKPSPEKESTSLDEKPSSGTEKST 1169
Query: 803 ILEEVTSSIE----TVDNG-SIETNAMTRIRDDIHLARENNTKFLADPIKDTESTG---- 853
L+E +SS + ++D S E T + + +EN+T + +P + EST
Sbjct: 1170 SLDEKSSSEKEKSTSLDEKPSSEKEKSTSLNERPSSEKENSTSLVENPSPEKESTSLDEK 1229
Query: 854 PSNVISTESNEVIDQTKIRDVSSSDH-SQMTSATKADFIKESGDPNNEMCKST 905
PS+ TE + +D+ + S ++ S+ K + + P++E KST
Sbjct: 1230 PSS--GTEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSQDEKPSSETEKST 1280
>UNIPROTKB|E2RPL9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 KO:K03515 CTD:51455
OMA:YRFCRGL EMBL:AAEX03007444 RefSeq:XP_538458.3
Ensembl:ENSCAFT00000003562 GeneID:481337 KEGG:cfa:481337
Uniprot:E2RPL9
Length = 1253
Score = 155 (59.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 98/449 (21%), Positives = 170/449 (37%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEAKQH 68
+DMDCF+ V + P L GKP+AV N +G G + A + ++ + K
Sbjct: 422 VDMDCFFVSVGIRNRPDLKGKPVAVTS-N--RGTGRAPLRPGANPQLEWQYYQNKILKGK 478
Query: 69 CPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMK 128
EI P D S + N A + +++ +A I + V +
Sbjct: 479 AAEI-----P------DSSMWENQDS---AQANGIDSVLSKAEIASCSYEARQVGIKNGM 524
Query: 129 SIGHIAASQLS-NTFVVGFGPDNNDEDARKA--GVMEWLGQVYS-DTDTSLMENTEDFQE 184
G A QL N V + E AR + + + + D +L++ TE E
Sbjct: 525 FFGQ--AKQLCPNLQAVPYDFHAYKEVARTMYETLASYTHNIEAVSCDEALVDITEILAE 582
Query: 185 LAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYA 243
+ +R + +T+ S GI N +LA++ KP Q L V
Sbjct: 583 TRLTPDEFANAVRTEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIR 642
Query: 244 NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHE 303
+ + +G + + + +L T +L+ ++ +LQ F KT LY RG+D
Sbjct: 643 GQLVSNLPGVGRSM-ESKLNSLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDR 701
Query: 304 PVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTV 363
PV KSI + + ++ ++ L++E+ RLE KR LT+
Sbjct: 702 PVRTEKERKSISAEINYGIR--FTQPKEAEAFLLNLSEEIQRRLEAAHVKGKR----LTL 755
Query: 364 SFTQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLF-LGLSAS 422
G ++ + + D + ++ + T+SA I T + + L+ S
Sbjct: 756 KVMVRKSGAPVETAK---FGGHGICDNITRTVTLDQATDSAKIIGKATLNMFHTMKLNIS 812
Query: 423 KFSPLGSHPSIQQFFKPQDHPEPMTSEHS 451
+G H + Q +P S S
Sbjct: 813 DMRGVGIH--VNQLVPTNPNPSACPSRPS 839
Score = 45 (20.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 36/205 (17%), Positives = 77/205 (37%)
Query: 556 IEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENL 615
I +E +++S+ E+VE + ++ + ++ PV+ + + + +
Sbjct: 928 INLSIEVPSPSQLDQSVLEALPPDLREQVEQVCVQQGELHGDKRKEPVNGCNTGILPQPV 987
Query: 616 GHTFETLPSPILT-SDRDIHT-STPCRRKGSKNVFENKTLKSKEELPLV-----KRVDNT 668
G +P P + SD I+ + P + VF + ++EL ++ +NT
Sbjct: 988 GTVLLQIPEPQESNSDAGINVIALPAFSQVDPEVFAALPAELQKELKAAYDQRQRQGENT 1047
Query: 669 I---PNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQS 725
P + RQ+KP + + K + P+ I P+ + + T
Sbjct: 1048 AQQQPATASVPKNPLRQLKPAAVKE-KKRNKKKNPISPPRKIQSPLKNKLLNSPVKTLPG 1106
Query: 726 HLNKPKLFADFPTTSQGNNPDTHEP 750
P+ D +G P + +P
Sbjct: 1107 ACGSPQKLIDGILKHEG--PASEKP 1129
>UNIPROTKB|Q9UBZ9 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9606 "Homo
sapiens" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0017125 "deoxycytidyl transferase
activity" evidence=IEA] [GO:0042276 "error-prone translesion
synthesis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009411 "response to UV" evidence=IDA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] Reactome:REACT_216 InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0005654
GO:GO:0000287 GO:GO:0003684 GO:GO:0006260 EMBL:AC018690
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:3VU7 PDBsum:3VU7 GO:GO:0017125 PDB:2LSK PDBsum:2LSK KO:K03515
CTD:51455 HOGENOM:HOG000154094 HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF
EMBL:AF151538 EMBL:AF206019 EMBL:AB047646 EMBL:AF357886
EMBL:AK002087 EMBL:AJ131720 IPI:IPI00008816 IPI:IPI00552928
IPI:IPI00552936 RefSeq:NP_001032961.1 RefSeq:NP_057400.1
UniGene:Hs.443077 PDB:2EBW PDB:2LSY PDB:3GQC PDBsum:2EBW
PDBsum:2LSY PDBsum:3GQC ProteinModelPortal:Q9UBZ9 SMR:Q9UBZ9
MINT:MINT-140323 STRING:Q9UBZ9 PhosphoSite:Q9UBZ9 DMDM:59798439
PaxDb:Q9UBZ9 PRIDE:Q9UBZ9 Ensembl:ENST00000258428
Ensembl:ENST00000393445 GeneID:51455 KEGG:hsa:51455 UCSC:uc002tac.3
UCSC:uc002tad.3 UCSC:uc002tae.1 GeneCards:GC02M100016
HGNC:HGNC:14060 HPA:HPA044534 HPA:HPA051036 MIM:606134
neXtProt:NX_Q9UBZ9 PharmGKB:PA162401120 InParanoid:Q9UBZ9
OMA:YRFCRGL PhylomeDB:Q9UBZ9 ChiTaRS:REV1 EvolutionaryTrace:Q9UBZ9
GenomeRNAi:51455 NextBio:55069 ArrayExpress:Q9UBZ9 Bgee:Q9UBZ9
CleanEx:HS_REV1 Genevestigator:Q9UBZ9 GermOnline:ENSG00000135945
Uniprot:Q9UBZ9
Length = 1251
Score = 147 (56.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 77/345 (22%), Positives = 136/345 (39%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAVNYEARHKGVTRHMRGDEAKQH 68
+DMDCF+ V + P L GKP+AV N +G G + A + ++ + K
Sbjct: 422 VDMDCFFVSVGIRNRPDLKGKPVAVTS-N--RGTGRAPLRPGANPQLEWQYYQNKILKGK 478
Query: 69 CPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMK 128
+I P D S + N A + +++ RA I + + +
Sbjct: 479 AADI-----P------DSSLWENPDS---AQANGIDSVLSRAEIASCSYEARQLGIKNGM 524
Query: 129 SIGHIAASQLS-NTFVVGFGPDNNDEDARKA--GVMEWLGQVYS-DTDTSLMENTEDFQE 184
GH A QL N V + E A+ + + + + D +L++ TE E
Sbjct: 525 FFGH--AKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAE 582
Query: 185 LAIA-GVIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYA 243
+ +R + +T+ S GI N +LA++ KP Q L V
Sbjct: 583 TKLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIR 642
Query: 244 NLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHE 303
+ + +G + ++ +L T +L+ ++ +LQ F KT LY RG+D
Sbjct: 643 GQLVTNLPGVGHSMESKLA-SLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDR 701
Query: 304 PVNARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLE 348
PV KS+ + + ++ ++ L++E+ RLE
Sbjct: 702 PVRTEKERKSVSAEINYGIR--FTQPKEAEAFLLSLSEEIQRRLE 744
>UNIPROTKB|F1MAB3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00372895 Ensembl:ENSRNOT00000040799
ArrayExpress:F1MAB3 Uniprot:F1MAB3
Length = 711
Score = 147 (56.8 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 66/240 (27%), Positives = 111/240 (46%)
Query: 191 IVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQ-SILPQSSVSMLYA-NLSIK 248
+V+EIR + KT SAGIA N +LAK+ +KP Q I+P S M + +L I+
Sbjct: 156 VVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIR 215
Query: 249 KVRHLGGKLGDEVVETLQCSTMLELEKFSLKQLQSH-FEEKTASWLYY--IARGIDHEPV 305
KV +G K+ ++++ L T EL + + L S F E +SW Y+ +A G+ +
Sbjct: 216 KVSGIG-KVTEKMLLALGIVTCTEL--YQQRALLSLLFSE--SSWHYFLHVALGLGSTDL 270
Query: 306 NARLVSKSIGCCKRFPGKTCLATRQDVSHWIQELADEVCERLEDDLTLNKRRAQLLTVSF 365
KS+ + F T + S L E+C L DL + + +T+
Sbjct: 271 ARDGERKSMSVERTF--SEINKTEEQYS-----LCQELCTELAHDLQKEGLKGRTVTIKL 323
Query: 366 TQETDGKVNSCSRSIALASYKLQDIVEVSMQVINKTNSAPPISDLTPPLLFLGLSASKFS 425
+ D +V + + ++ A +DI V+ +++ +A L L +G+ S FS
Sbjct: 324 -KNVDFEVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLR--LRLMGVRMSTFS 380
Score = 46 (21.3 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 111 SIDEAYIDLTDVVHER 126
S+DEAY+++T + ER
Sbjct: 59 SLDEAYLNITQHLQER 74
Score = 44 (20.5 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 858 ISTES-NEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
IS E+ NE +D + S+S++S+M S + A S D + ++ + +G
Sbjct: 496 ISLEAFNEHVDAC-LDGPSTSENSEMPSYSHAS----SADIGQQAHRAVPLWEK----RG 546
Query: 917 NGNADVSPMDTVDIINT 933
+G+ +++ D D+ T
Sbjct: 547 HGDGEITSGDGADLTET 563
Score = 43 (20.2 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 937 SSTVDSAINIADPTKIICDKC---SQPIDINELQEHQD 971
S + ++ N DP IC C + I + EH D
Sbjct: 469 SESFKTSENSNDPQTFICPVCFREQEGISLEAFNEHVD 506
Score = 41 (19.5 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 683 VKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRK-YETTRQSHLNKPKLFADFPTTSQ 741
VKP S + +K E P P I+ + + + S K K+ F T+
Sbjct: 419 VKPLETSRKKSFFDKKRSERIPNCQDPPRCKIAGEQALQASEPSQALK-KMSESFKTSEN 477
Query: 742 GNNPDT 747
N+P T
Sbjct: 478 SNDPQT 483
Score = 37 (18.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 445 PMTSEHSSLPEQS 457
P TSE+S +P S
Sbjct: 512 PSTSENSEMPSYS 524
>CGD|CAL0004744 [details] [associations]
symbol:orf19.6712 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030137 "COPI-coated vesicle" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] CGD:CAL0004744
EMBL:AACQ01000029 EMBL:AACQ01000028 eggNOG:NOG127593
InterPro:IPR022092 InterPro:IPR022091 Pfam:PF12329 Pfam:PF12325
RefSeq:XP_719695.1 RefSeq:XP_719812.1 GeneID:3638453 GeneID:3638566
KEGG:cal:CaO19.14004 KEGG:cal:CaO19.6712 Uniprot:Q5ADY0
Length = 658
Score = 141 (54.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 115/529 (21%), Positives = 224/529 (42%)
Query: 443 PEPMT-SEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKL 501
PEP S + PE +D R K Q +LA +K K S + L
Sbjct: 24 PEPSKESSRETTPESVPTNDQSDRPKPKKRLTLQE--RLAQAAKGKK---KPSSTTPTSL 78
Query: 502 DSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVE 561
+N D+ D+ +I+ + EN + + K SN D++ KL S + +E
Sbjct: 79 SRTTSNEDQKPDLDLQMEIERLKLENSALTKKLNHK-SNF-DKERNDLIAKLASKDETIE 136
Query: 562 ESVGKDIEESLKNVSDVLFNEKVENLTMENK---KSIKNECL-SPVSS-KSKDLTNENLG 616
+ + K+ E+L ++ ++ NE ++ L + N+ ++I++ + S SS K ++LT+
Sbjct: 137 Q-LRKE-GEAL-SLKELKLNESIKKLKLANQDLEENIRDYSVKSEESSMKLEELTDFLKT 193
Query: 617 HTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSK-EELPLVKRVDNTIPNSFEF 675
H F+T+ +++ ++ + G +N + T ++K EL + N E
Sbjct: 194 HKFKTIDQ-VVSKYEEVVKELEVAKAGLEN---SHTWETKYNELVVSHEEANAAKK--EL 247
Query: 676 ITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFAD 735
+ T +VK E N +K + E I K + S + ++QS + D
Sbjct: 248 LKETN-EVKIE--LNMLKRQHKLEIESKNATI-KELKS----QMSASKQSFAQEISRLED 299
Query: 736 FPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPS 795
T + N + N+ GK F E + E R+ K + L+ + +
Sbjct: 300 KIETLRLENESNETVSENVNEDGK-VDFDE--FSKLSEAHRILQK----QYLSSQENWKA 352
Query: 796 VETNTHTILEEVTSSIETVDNGSIE-TNAMTRIRDDIHLARENNTKFLADPIKDTESTGP 854
+E+N ++ ++SS+E++ + T + ++ + +HL + K D IK E
Sbjct: 353 IESNLSLKVDNLSSSVESLKKSKHKLTQDLAKVNNSMHLQLKEMEKLEQDKIKLQEERNQ 412
Query: 855 SNV-ISTESNEVIDQT----KIRDVSSSDHSQMTSATKA--DFIKESGDPNNEMCKSTVQ 907
+ + + NE+++ T K + + + + + + S ++ D IKE P + ++
Sbjct: 413 LQLTVEMKENEIVEITEKFEKFKGIYNQERAALNSKIQSLNDKIKEEKRPER---LNLIR 469
Query: 908 FHSNSINKG---NGNADVSPMDTVDIINTIADSST-VDSAINIADPTKI 952
NS++ G + + T IN D ST +D I+ + T+I
Sbjct: 470 --DNSVSSGFSWDNEIKLGESSTTPAINR--DFSTFLDRNISSSSFTEI 514
>UNIPROTKB|Q5ADY0 [details] [associations]
symbol:CaO19.14004 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0004744 EMBL:AACQ01000029 EMBL:AACQ01000028
eggNOG:NOG127593 InterPro:IPR022092 InterPro:IPR022091 Pfam:PF12329
Pfam:PF12325 RefSeq:XP_719695.1 RefSeq:XP_719812.1 GeneID:3638453
GeneID:3638566 KEGG:cal:CaO19.14004 KEGG:cal:CaO19.6712
Uniprot:Q5ADY0
Length = 658
Score = 141 (54.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 115/529 (21%), Positives = 224/529 (42%)
Query: 443 PEPMT-SEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKL 501
PEP S + PE +D R K Q +LA +K K S + L
Sbjct: 24 PEPSKESSRETTPESVPTNDQSDRPKPKKRLTLQE--RLAQAAKGKK---KPSSTTPTSL 78
Query: 502 DSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVE 561
+N D+ D+ +I+ + EN + + K SN D++ KL S + +E
Sbjct: 79 SRTTSNEDQKPDLDLQMEIERLKLENSALTKKLNHK-SNF-DKERNDLIAKLASKDETIE 136
Query: 562 ESVGKDIEESLKNVSDVLFNEKVENLTMENK---KSIKNECL-SPVSS-KSKDLTNENLG 616
+ + K+ E+L ++ ++ NE ++ L + N+ ++I++ + S SS K ++LT+
Sbjct: 137 Q-LRKE-GEAL-SLKELKLNESIKKLKLANQDLEENIRDYSVKSEESSMKLEELTDFLKT 193
Query: 617 HTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSK-EELPLVKRVDNTIPNSFEF 675
H F+T+ +++ ++ + G +N + T ++K EL + N E
Sbjct: 194 HKFKTIDQ-VVSKYEEVVKELEVAKAGLEN---SHTWETKYNELVVSHEEANAAKK--EL 247
Query: 676 ITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFAD 735
+ T +VK E N +K + E I K + S + ++QS + D
Sbjct: 248 LKETN-EVKIE--LNMLKRQHKLEIESKNATI-KELKS----QMSASKQSFAQEISRLED 299
Query: 736 FPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPS 795
T + N + N+ GK F E + E R+ K + L+ + +
Sbjct: 300 KIETLRLENESNETVSENVNEDGK-VDFDE--FSKLSEAHRILQK----QYLSSQENWKA 352
Query: 796 VETNTHTILEEVTSSIETVDNGSIE-TNAMTRIRDDIHLARENNTKFLADPIKDTESTGP 854
+E+N ++ ++SS+E++ + T + ++ + +HL + K D IK E
Sbjct: 353 IESNLSLKVDNLSSSVESLKKSKHKLTQDLAKVNNSMHLQLKEMEKLEQDKIKLQEERNQ 412
Query: 855 SNV-ISTESNEVIDQT----KIRDVSSSDHSQMTSATKA--DFIKESGDPNNEMCKSTVQ 907
+ + + NE+++ T K + + + + + + S ++ D IKE P + ++
Sbjct: 413 LQLTVEMKENEIVEITEKFEKFKGIYNQERAALNSKIQSLNDKIKEEKRPER---LNLIR 469
Query: 908 FHSNSINKG---NGNADVSPMDTVDIINTIADSST-VDSAINIADPTKI 952
NS++ G + + T IN D ST +D I+ + T+I
Sbjct: 470 --DNSVSSGFSWDNEIKLGESSTTPAINR--DFSTFLDRNISSSSFTEI 514
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 144 (55.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 112/543 (20%), Positives = 214/543 (39%)
Query: 425 SPLGSHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLA-LN 483
S +G P Q +D + ++S S P + + S + T Q P +
Sbjct: 139 SAVGIEPLSQDNLADKDKKDIISSSSDSSPTEDATYSSTQVSST------QVPEDASSAE 192
Query: 484 RIERKLIDKFKSHIESKLDSCNANVDKLVIGDIS----EQIKNIAAENVRKYLRTH-SKD 538
I+ +S + L S A++D +++ S E I + + +H S D
Sbjct: 193 SIQESTTQGSRSSTDISL-STEASLDDIILSSESIVPTESSTTIISSSTEGSWESHISTD 251
Query: 539 SNASDEDEESFNDKLVSIEREVEESVGKDI--EESLKNVSDVLFNEKVENLTMENKKSIK 596
S+ + E + L S+ +E S + E S D E + + T E+ S +
Sbjct: 252 SSIGSKVESLLIEALYSLIQESSSSSESPVSNEPSTGATDDSSSTESLPDSTQESSSSSE 311
Query: 597 NECLSPVSSK-SKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKS 655
SPVS + S + TNE+ + E+LP+ T D T T + + + + + + S
Sbjct: 312 ----SPVSFELSTEATNES--SSSESLPNSS-TQDSSSSTETSFQTESTTDATDESS--S 362
Query: 656 KEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSIS 715
E P +++ T + V ++ S ++ D+ T + S P+ + S
Sbjct: 363 TESQPDSTTQESSSSTEGPLSTESSTAVTDQSSSTESSQDSTTQESSSST--EGPLSTES 420
Query: 716 MRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEP---PNSSNKRGKSYSFFENYLRRKK 772
E T +S + D +T+Q ++ T P +S+ +S S + +
Sbjct: 421 ST--EATNESSSTESS--QD--STTQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQ 474
Query: 773 ERERLNSKSCKDETLTHG-QVHPSVETNTHTILEEVTSSIE---TVDNGSIETNAMTRIR 828
E E+ T S E++ + +E +SS E + ++ + TN +
Sbjct: 475 ESSSSTEGPLSTESSTEATNESSSTESSQDSTTQESSSSSEGPLSTESSTEATNESSSTE 534
Query: 829 DDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKA 888
+ ++ P+ ST + STES++ D T ++ SSS +++ +
Sbjct: 535 SSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQ--DSTT-QESSSSTEDPLSTESST 591
Query: 889 DFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIA--DSSTVDSAINI 946
+ ES + ST Q S+S +G + + S + + +T + DS+T S+ +
Sbjct: 592 EATNESSSTESSQ-DSTTQ-ESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQKSSSST 649
Query: 947 ADP 949
P
Sbjct: 650 ESP 652
>UNIPROTKB|Q8I659 [details] [associations]
symbol:PFB0765w "Uncharacterized protein PFB0765w"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] eggNOG:NOG12793 EMBL:AE001362 PIR:E71606
RefSeq:XP_001349671.1 ProteinModelPortal:Q8I659 IntAct:Q8I659
MINT:MINT-1630458 EnsemblProtists:PFB0765w:mRNA GeneID:812753
KEGG:pfa:PFB0765w EuPathDB:PlasmoDB:PF3D7_0216700.1
HOGENOM:HOG000212887 OMA:THEMKEL ProtClustDB:CLSZ2446611
Uniprot:Q8I659
Length = 1383
Score = 142 (55.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 90/445 (20%), Positives = 182/445 (40%)
Query: 464 KRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNI 523
+ +K +LN ++ Q N+IE ++ ++ K ++ + C+ N+ ++ I E K++
Sbjct: 943 QEEKDMLNNKIKSMDQTHKNQIE-EMQEENKKELKRLKNVCDMNLQSQIL--IKENEKHM 999
Query: 524 AAENVRKYLRT-HSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNE 582
E V +Y KD + +E D+ + I+ + E + D EE LK + N+
Sbjct: 1000 Q-EKVEEYKNLLKQKDQELKNIIQEY--DERIEIQNKEMEDIVNDCEEKLKQAK--INNK 1054
Query: 583 KVENLT-MENKKS-IKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCR 640
K+ T M N + + +E L K DL + + E + + + H+ +
Sbjct: 1055 KLTTATNMANNNNMLMDENLKEKDKKINDLMKD-MEKKKEEINKLVEEKSKLEHSHVKIQ 1113
Query: 641 RKGSKNVFENKTLKSKEELPLVKRVD-NTIPNSFEFITYTRRQVKPENISNGNNSDNKTD 699
+ S V +N+ LK + L + D I E Y + K E N + K +
Sbjct: 1114 NEMSLLVEQNEKLKEEMGLSRIAIKDMEEIKKDME--KYEEEKKKNEEERKKNEEERKKN 1171
Query: 700 DEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPN----SSN 755
+E+ + + + RK + L K K F + H+ +
Sbjct: 1172 EEERKKNEEEKKKNEEERKKNEEEKKKLEKDK--HQFEEEKERMEIYEHQKEDRKRKDKK 1229
Query: 756 KRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVD 815
K+G S E Y +++K +E+ ++ +E + + N L+ ++ ++ +
Sbjct: 1230 KKGHSSDKEEKYNKKEKTKEKSSNILFDEEYIIQLEELRDTGENCFIYLKSLSKELDVII 1289
Query: 816 NG--SIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIR- 872
N S + + + I+LA + F + + T N +TE N ID+
Sbjct: 1290 NKLKSKDDALLNDAFNKINLAITSWNIFNEENKEGDNITTVENT-ATEGNITIDENTTEV 1348
Query: 873 DVSSSDHSQMTSATKADFIK-ESGD 896
++++ + ++ S K D +K E G+
Sbjct: 1349 EMNNEEVYKIFSVEKYDMLKKEVGE 1373
>UNIPROTKB|Q8I3Z1 [details] [associations]
symbol:PFE0570w "MATH and LRR domain-containing protein
PFE0570w" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002083
InterPro:IPR006145 InterPro:IPR008974 InterPro:IPR016024
InterPro:IPR020103 Pfam:PF00849 PROSITE:PS50144 GO:GO:0016021
SUPFAM:SSF48371 GO:GO:0003723 SUPFAM:SSF49599 EMBL:AL844504
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 RefSeq:XP_001351672.1
HSSP:P0AA39 ProteinModelPortal:Q8I3Z1 IntAct:Q8I3Z1
MINT:MINT-1566570 PRIDE:Q8I3Z1 EnsemblProtists:PFE0570w:mRNA
GeneID:812939 KEGG:pfa:PFE0570w EuPathDB:PlasmoDB:PF3D7_0511500
eggNOG:COG0564 Uniprot:Q8I3Z1
Length = 10,061
Score = 133 (51.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 90/441 (20%), Positives = 180/441 (40%)
Query: 457 STNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDI 516
+ N+++ + + NQ N K+ D+ + +K+ N N + I ++
Sbjct: 294 NNNNNNNNDNHVCTSNNQPNTINKQNNLPSHKINDQ---NGRTKITPQNVNQKEKEIKNV 350
Query: 517 SEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVS 576
++ N E + + D N++DE S+N + S E E+ ++ N +
Sbjct: 351 VKEKNNFNREE-KDITNSDDYDENSTDESC-SYNPNITSSENSEEDCYEPSSDDKPSNNT 408
Query: 577 -----------DVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTF--ETLP 623
DV N+ +L +++ ++ E K K+L N+N +T ET+
Sbjct: 409 SDHININDIRNDVPSNDNASSLNVKSAENCNKEKKKKKKKKKKELNNDNKDNTLNNETM- 467
Query: 624 SPILTSDRDIHTSTPCRR--KGSKNV-F-----ENKTLKSKEELPLVKRVDNTIPNSFEF 675
+ I ++++ +T + K KN F EN+ S+ +P ++ + + PN F
Sbjct: 468 NDINMNNKNDNTCFTIQESNKNCKNENFLILGNENEMKTSRINVPKIEIIKDEEPNRF-- 525
Query: 676 ITYTRRQVKPENISNGNNSDNKTDDEDSPQVIT-KPIGSISMRKYET--TRQSHLNK-PK 731
+ +K +NI N+ DN DD D ++I K SI K +++S++NK
Sbjct: 526 --FDNNDLKNKNI---NDHDNDNDDIDFIKMIKDKMKKSIYNNKDNKCISKKSNINKIEN 580
Query: 732 LFADFPTTSQGNNPDTHEPPNSSNKR--GKSYSFFENYLRRKKERERLNSKSCKDETLTH 789
+ + NN D + N S + K + E+Y RK+ ++ C
Sbjct: 581 PVNNNNNNNNNNNNDINIFSNLSEQNILKKESNVCESYEGRKESNNTIHKIHCSKGKKNI 640
Query: 790 GQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDT 849
++ S T+++ + + I N + N + I H ++ N +F P D
Sbjct: 641 MNLNNSSNTSSNFLSQHTLDDINKKYNVLSDVNLLKLIA---HCSKSKNGEF---PSMDD 694
Query: 850 ESTGPSNVISTESNEVIDQTK 870
+ + I+ + N + ++ K
Sbjct: 695 KII--EDFINMKKNSIKNEIK 713
Score = 79 (32.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/145 (20%), Positives = 60/145 (41%)
Query: 825 TRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVID-----QTKIRDVSSSDH 879
T++ ++ +++NN + + D ++ N E NE + K+RD +
Sbjct: 2463 TKVGNEGKKSKDNNNNNNNNMMGDDDNKVNKNEEGNEQNESAQIKEGKEKKLRDFIQKED 2522
Query: 880 SQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSST 939
+ ++ + G N + S ++N+ N N N ++ +D D N + +
Sbjct: 2523 IRNEDNESYEYYNDQGTENLDDMNSDEYMNNNNNNNNNNNNNIKRLD--DSYNKLLKNKN 2580
Query: 940 VDSAI-NIADPTK-------IICDK 956
++S I N+ K IICDK
Sbjct: 2581 INSLIYNLVSKLKMDFYKNYIICDK 2605
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/135 (21%), Positives = 58/135 (42%)
Query: 831 IHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADF 890
I +E T L + K S+VIST E +D++ D S+D + + +++
Sbjct: 3776 IKFLKEEKTNNLIN--KYISFNDDSDVISTNDEENVDRSD--DSESNDDKKYSKKKQSNL 3831
Query: 891 IKESGD-PNNEMCKSTVQFHSNSIN-KGNGNADVSPMDTVDIINTIADSSTVDSAINIAD 948
+ + D + + +S+S N K N N + MD + N+ ++ ++ N D
Sbjct: 3832 LLSNFDFVDISSIEKLTSGNSSSKNSKKNSNNESIQMDNTNNSNSNNNNKNDNNNDNNND 3891
Query: 949 PTKIICDKCSQPIDI 963
C C+ +++
Sbjct: 3892 NNNSFCYYCADELNV 3906
>GENEDB_PFALCIPARUM|MAL7P1.119 [details] [associations]
symbol:MAL7P1.119 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844506 RefSeq:XP_001349123.1
ProteinModelPortal:Q8IBN1 IntAct:Q8IBN1 MINT:MINT-1548670
EnsemblProtists:MAL7P1.119:mRNA GeneID:2655185 KEGG:pfa:MAL7P1.119
EuPathDB:PlasmoDB:PF3D7_0722200 HOGENOM:HOG000212675 OMA:DDHKNED
Uniprot:Q8IBN1
Length = 749
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 106/526 (20%), Positives = 199/526 (37%)
Query: 462 SKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDI--SEQ 519
S DK +N N P Q + + K I+ +S ++S N N++ + +
Sbjct: 22 SSSNDKNKINKNNM-PLQRGASNL--KDINIHNVEKKSNMESVNNNINNTTCSKNLNANK 78
Query: 520 IKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVL 579
+ N+A V K T N E EE+ N+++ E E EE+ + +E+ +N
Sbjct: 79 VPNVAHTGVNKKGET----KNEEVEKEENENEEIEKEEIENEENQQNEEDENEENQQ--- 131
Query: 580 FNEKVENLTMENKKSIKNECLSPVSSKSKDLTNEN--LGHTFE-TLPSPILT-SDRD--- 632
NE+ EN EN++ N +S K+K+L E L E + ++ S++D
Sbjct: 132 -NEEDEN--EENQQMNVNVDVS-AEKKNKELPEEKKELQKNSEKNINKEVIKDSNKDNTF 187
Query: 633 -IHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISN- 690
H + +KN++ N + +++ + I + + K N++N
Sbjct: 188 NFHKNINTSFNKNKNIYNNNNNNNNNNKTFIEKKEEAIDMKKTHCSNNNKMCKYNNMNNH 247
Query: 691 -GNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHE 749
N +N E+S Q + KPI ++ T + + + + D
Sbjct: 248 MSTNKNNNQIFEESKQNVNKPIYNLKSLGNNTFKNDEKYNENDYKNNHDDDKKKYTDDSN 307
Query: 750 PPNSSNKRGKSYSFFENYLRRKKE---RERLNSKS----CKDETLTHGQVHPSVE-TNTH 801
N +R + + L+ KE R+R N + + ++ + + S + N
Sbjct: 308 EENIYEERNQKILLI-HLLKNIKELLNRQRQNFNNFLSFLSENYQSYEKFYKSQKYQNGK 366
Query: 802 TILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTE 861
++++ E + N S+ T++ + + ++ N F+ + D G +
Sbjct: 367 NYIDKLDQQGE-LKNVSVVTHSFLDMSKAANGKKDKNGVFVK-LMNDQNDDGDDTKDGDD 424
Query: 862 SNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNAD 921
+ + D K D DH D K D N H N + NG+ D
Sbjct: 425 TKDE-DDHKNED----DHKNEDDHKNEDDHKNEDDHKNGDDNKNGDDHKNGDDNKNGDDD 479
Query: 922 VSPM--DTVDIINTIADSSTVDSAINIADPTKIICDKCSQPIDINE 965
D DI N I T+ + +I D K + + +D+ E
Sbjct: 480 NGKKSHDISDIKNII---DTILQSDDITDEQKKYLEIIKKILDLEE 522
>UNIPROTKB|Q8IBN1 [details] [associations]
symbol:MAL7P1.119 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AL844506 RefSeq:XP_001349123.1
ProteinModelPortal:Q8IBN1 IntAct:Q8IBN1 MINT:MINT-1548670
EnsemblProtists:MAL7P1.119:mRNA GeneID:2655185 KEGG:pfa:MAL7P1.119
EuPathDB:PlasmoDB:PF3D7_0722200 HOGENOM:HOG000212675 OMA:DDHKNED
Uniprot:Q8IBN1
Length = 749
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 106/526 (20%), Positives = 199/526 (37%)
Query: 462 SKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDI--SEQ 519
S DK +N N P Q + + K I+ +S ++S N N++ + +
Sbjct: 22 SSSNDKNKINKNNM-PLQRGASNL--KDINIHNVEKKSNMESVNNNINNTTCSKNLNANK 78
Query: 520 IKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVL 579
+ N+A V K T N E EE+ N+++ E E EE+ + +E+ +N
Sbjct: 79 VPNVAHTGVNKKGET----KNEEVEKEENENEEIEKEEIENEENQQNEEDENEENQQ--- 131
Query: 580 FNEKVENLTMENKKSIKNECLSPVSSKSKDLTNEN--LGHTFE-TLPSPILT-SDRD--- 632
NE+ EN EN++ N +S K+K+L E L E + ++ S++D
Sbjct: 132 -NEEDEN--EENQQMNVNVDVS-AEKKNKELPEEKKELQKNSEKNINKEVIKDSNKDNTF 187
Query: 633 -IHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISN- 690
H + +KN++ N + +++ + I + + K N++N
Sbjct: 188 NFHKNINTSFNKNKNIYNNNNNNNNNNKTFIEKKEEAIDMKKTHCSNNNKMCKYNNMNNH 247
Query: 691 -GNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHE 749
N +N E+S Q + KPI ++ T + + + + D
Sbjct: 248 MSTNKNNNQIFEESKQNVNKPIYNLKSLGNNTFKNDEKYNENDYKNNHDDDKKKYTDDSN 307
Query: 750 PPNSSNKRGKSYSFFENYLRRKKE---RERLNSKS----CKDETLTHGQVHPSVE-TNTH 801
N +R + + L+ KE R+R N + + ++ + + S + N
Sbjct: 308 EENIYEERNQKILLI-HLLKNIKELLNRQRQNFNNFLSFLSENYQSYEKFYKSQKYQNGK 366
Query: 802 TILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTE 861
++++ E + N S+ T++ + + ++ N F+ + D G +
Sbjct: 367 NYIDKLDQQGE-LKNVSVVTHSFLDMSKAANGKKDKNGVFVK-LMNDQNDDGDDTKDGDD 424
Query: 862 SNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNAD 921
+ + D K D DH D K D N H N + NG+ D
Sbjct: 425 TKDE-DDHKNED----DHKNEDDHKNEDDHKNEDDHKNGDDNKNGDDHKNGDDNKNGDDD 479
Query: 922 VSPM--DTVDIINTIADSSTVDSAINIADPTKIICDKCSQPIDINE 965
D DI N I T+ + +I D K + + +D+ E
Sbjct: 480 NGKKSHDISDIKNII---DTILQSDDITDEQKKYLEIIKKILDLEE 522
>ZFIN|ZDB-GENE-030131-5598 [details] [associations]
symbol:bin2b "bridging integrator 2b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004148 Pfam:PF03114 PROSITE:PS51021 SMART:SM00721
ZFIN:ZDB-GENE-030131-5598 GO:GO:0005737 eggNOG:NOG264615
HOGENOM:HOG000252987 HOVERGEN:HBG004224 InterPro:IPR003005
PRINTS:PR01251 OrthoDB:EOG45HRXJ HSSP:O08839 EMBL:BC044473
IPI:IPI00770135 RefSeq:NP_956090.1 UniGene:Dr.79119
ProteinModelPortal:Q803I3 SMR:Q803I3 PRIDE:Q803I3 GeneID:327387
KEGG:dre:327387 CTD:327387 InParanoid:Q803I3 NextBio:20810012
ArrayExpress:Q803I3 Bgee:Q803I3 Uniprot:Q803I3
Length = 524
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 100/424 (23%), Positives = 183/424 (43%)
Query: 478 FQLALNRIERKLIDKFKSHIESK---LDSCNANVDKLVIGDISEQIKNIAAE-NVRKYLR 533
FQ ++NR + K++ K +E+K + C+AN++K I K++ A N K +
Sbjct: 25 FQKSMNRAQEKVLQKLGKTMETKDEQFEECSANLNKQQTDGI-RLYKDVKAYYNAVKVMH 83
Query: 534 THSKDSNASDED--EESFND-KLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTME 590
SK + + +D E ++ + +++ E E+ + D EE L N++V TME
Sbjct: 84 ESSKRLSQTLKDIYEPDWHGVEDLTVIMESEDLLWNDYEEKL--------NDQVVR-TME 134
Query: 591 NKKSIKNECLSPVSSKSKDLTN-ENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFE 649
N + + V+ + + L + ++ H E L S D ++ + K ++ VFE
Sbjct: 135 NYTAQFQDVKERVAKRGRKLVDYDSTRHHLEALQSAKKRDDAKVNKAEEEFNK-AQEVFE 193
Query: 650 NKTLKSKEELPLV--KRVDNTIPNSFEFITYTRRQVKPE-NISNGN--NSDNKTDDEDSP 704
+ + +EELP++ R+ + F+ I+ R E ++ N N N K +D+ S
Sbjct: 194 DINKELREELPVLYQSRISCYV-TMFQNISNLRDVFYKEMSMLNHNIYNMMKKLEDQHST 252
Query: 705 Q-VITKPIGSISMRKYET-TRQSHLNKPKLF-ADFPTTSQGNNPDT--H-----EPPNSS 754
+ I K + S +K ++ T + + F D P S+ + PDT H P+ S
Sbjct: 253 KPFIVKGLNSSKSKKRKSVTISAPIPCNTAFPTDHPAMSKLSMPDTLAHTDTRIHTPSKS 312
Query: 755 NKRGKSYS-FFENYLRRKKERERLNSKSCKDETLTHGQVHPS-VETNTHTILEEVTSSIE 812
+ +S S F++ K + + +S T G V+ N + V S+E
Sbjct: 313 TEISESESDSFDSEPNTPKRQSLCSVRSDGASENTSGSTTDEIVQANGQEHQDSV--SVE 370
Query: 813 TVDNGSIETNAMTRIRDDIHLAR---ENNTKFL-ADPIKDTESTGP--SNVISTESNEVI 866
+ +++ +D H A ++ TK L AD K P S+ + E
Sbjct: 371 RQEEEESKSSQAAS-SEDAHNASTDGDDQTKLLSADEDKPAPIPTPRRSSTSKKDEGETD 429
Query: 867 DQTK 870
+ TK
Sbjct: 430 ENTK 433
>GENEDB_PFALCIPARUM|PFL0150w [details] [associations]
symbol:PFL0150w "origin recognition complex 1
protein" species:5833 "Plasmodium falciparum" [GO:0003688 "DNA
replication origin binding" evidence=ISS] [GO:0006270 "DNA
replication initiation" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR020793 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003688 GO:GO:0006270
EMBL:AE014188 GO:GO:0017111 eggNOG:COG1474 PANTHER:PTHR10763:SF6
GO:GO:0000808 EMBL:AF373219 RefSeq:XP_001350439.1
ProteinModelPortal:Q8I615 EnsemblProtists:PFL0150w:mRNA
GeneID:811083 GenomeReviews:AE014188_GR KEGG:pfa:PFL0150w
EuPathDB:PlasmoDB:PF3D7_1203000 HOGENOM:HOG000281151
ProtClustDB:PTZ00112 Uniprot:Q8I615
Length = 1189
Score = 139 (54.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 92/451 (20%), Positives = 187/451 (41%)
Query: 464 KRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNI 523
K++K L+ + +L I L ++I S L + ++++ + D ++ K I
Sbjct: 119 KKEKYNLDETSSSSISSSLTNISSSL-----TNISSSLTNISSSLSNSL--DEKKKKKKI 171
Query: 524 AAEN--VRKYLRTHSKDSNASDEDEESFNDKL-VSIEREVEESVGKDIEESLKNVSDVLF 580
N + L ++ +SN ++ + +K +S + + +E +K S+ +
Sbjct: 172 KKNNSTIINILNNNNNNSNIHHNNKHNIYNKYNISKKPQNKEIHTLPSNHQIKKKSNNTY 231
Query: 581 N---EKVE-NLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTS 636
N +K++ N++ +N SIKN K+K+ ++N+ D+DI T
Sbjct: 232 NTCQQKMKKNISKKNTHSIKNNQNDKNKEKNKE-KDKNIKKD----------RDKDIQTK 280
Query: 637 -TPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNS- 694
T + + N FE + L+S V N + N+ +R + I + +S
Sbjct: 281 RTSHQSQDQNNHFERRILRSYTRNN--DNVKNNLKNNINNNNTLKRSSQSVRIDSDLSSA 338
Query: 695 -DNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNS 753
NK D +I + + + +TT +H K+ + P+ + DT N+
Sbjct: 339 HQNKRIKYDEKNIIHRNNNNNNNNNNKTTSNNHNKNNKINNNNPSENYKKQTDTKHTNNT 398
Query: 754 SNKRGKSYSFFENYLRRKKERERLNSKSCKDE---TLTHGQVHPSVETNTHTILEEVTSS 810
N + + K+ +N+K+ K T T +V S+++NT +++E +S
Sbjct: 399 QNNKYNKTKTTNTFKHPSKDHTDVNTKTFKSRYINTYTMEEVQKSIKSNTIKLVQE--NS 456
Query: 811 IETVDN---GSIETNAMT-RIRDDIHLA-RENNTKFLADPIKDTESTGPSNVISTESNEV 865
E D SI+ N I +D+ + NN + A D ++ +N+ E+ +
Sbjct: 457 CEYQDGIIYESIQINDEEYSIGEDVLIFYTPNNNTYNAKS-DDKKNQNNNNI--KENIYL 513
Query: 866 IDQTKIRDVSSSDHSQMTSATKADFIKESGD 896
+ + KI S +S++ + ES +
Sbjct: 514 LKKGKISSFYKSTNSKVIEVEICFYYDESDE 544
>UNIPROTKB|Q8I615 [details] [associations]
symbol:orc1 "Origin recognition complex subunit 1"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0003688 "DNA replication
origin binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006270 "DNA replication initiation" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR020793
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0003688 GO:GO:0006270 EMBL:AE014188 GO:GO:0017111
eggNOG:COG1474 PANTHER:PTHR10763:SF6 GO:GO:0000808 EMBL:AF373219
RefSeq:XP_001350439.1 ProteinModelPortal:Q8I615
EnsemblProtists:PFL0150w:mRNA GeneID:811083
GenomeReviews:AE014188_GR KEGG:pfa:PFL0150w
EuPathDB:PlasmoDB:PF3D7_1203000 HOGENOM:HOG000281151
ProtClustDB:PTZ00112 Uniprot:Q8I615
Length = 1189
Score = 139 (54.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 92/451 (20%), Positives = 187/451 (41%)
Query: 464 KRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNI 523
K++K L+ + +L I L ++I S L + ++++ + D ++ K I
Sbjct: 119 KKEKYNLDETSSSSISSSLTNISSSL-----TNISSSLTNISSSLSNSL--DEKKKKKKI 171
Query: 524 AAEN--VRKYLRTHSKDSNASDEDEESFNDKL-VSIEREVEESVGKDIEESLKNVSDVLF 580
N + L ++ +SN ++ + +K +S + + +E +K S+ +
Sbjct: 172 KKNNSTIINILNNNNNNSNIHHNNKHNIYNKYNISKKPQNKEIHTLPSNHQIKKKSNNTY 231
Query: 581 N---EKVE-NLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTS 636
N +K++ N++ +N SIKN K+K+ ++N+ D+DI T
Sbjct: 232 NTCQQKMKKNISKKNTHSIKNNQNDKNKEKNKE-KDKNIKKD----------RDKDIQTK 280
Query: 637 -TPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNS- 694
T + + N FE + L+S V N + N+ +R + I + +S
Sbjct: 281 RTSHQSQDQNNHFERRILRSYTRNN--DNVKNNLKNNINNNNTLKRSSQSVRIDSDLSSA 338
Query: 695 -DNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNS 753
NK D +I + + + +TT +H K+ + P+ + DT N+
Sbjct: 339 HQNKRIKYDEKNIIHRNNNNNNNNNNKTTSNNHNKNNKINNNNPSENYKKQTDTKHTNNT 398
Query: 754 SNKRGKSYSFFENYLRRKKERERLNSKSCKDE---TLTHGQVHPSVETNTHTILEEVTSS 810
N + + K+ +N+K+ K T T +V S+++NT +++E +S
Sbjct: 399 QNNKYNKTKTTNTFKHPSKDHTDVNTKTFKSRYINTYTMEEVQKSIKSNTIKLVQE--NS 456
Query: 811 IETVDN---GSIETNAMT-RIRDDIHLA-RENNTKFLADPIKDTESTGPSNVISTESNEV 865
E D SI+ N I +D+ + NN + A D ++ +N+ E+ +
Sbjct: 457 CEYQDGIIYESIQINDEEYSIGEDVLIFYTPNNNTYNAKS-DDKKNQNNNNI--KENIYL 513
Query: 866 IDQTKIRDVSSSDHSQMTSATKADFIKESGD 896
+ + KI S +S++ + ES +
Sbjct: 514 LKKGKISSFYKSTNSKVIEVEICFYYDESDE 544
>GENEDB_PFALCIPARUM|PFL1835w [details] [associations]
symbol:PFL1835w "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AE014188 RefSeq:XP_001350773.1
ProteinModelPortal:Q8I544 IntAct:Q8I544 MINT:MINT-1559800
EnsemblProtists:PFL1835w:mRNA GeneID:811419 KEGG:pfa:PFL1835w
EuPathDB:PlasmoDB:PF3D7_1237900 OMA:IKEDDEH ProtClustDB:CLSZ2514950
Uniprot:Q8I544
Length = 1188
Score = 136 (52.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 105/488 (21%), Positives = 198/488 (40%)
Query: 509 DKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDI 568
D+ +GD +QI +N +D + + +++F+D VS ++++
Sbjct: 648 DESFVGD-KDQI--FEDDNYVSEREEFKQDESFVGDKDQNFDDDYVSEREDIKQDDDYIS 704
Query: 569 EESLKNVSDVLFNEKVENLTMENKKSIKNECL---SPVSSKSKDLTNENLGHTFETLPSP 625
E D +K +N +N S K E + + +S + + + ++N E +
Sbjct: 705 ERDEIKQDDSFAGDKDQNFEDDNYVSEKEEIIYDNNNISDREQVIQDDNYVSDKEEI--- 761
Query: 626 ILTSDRDIHTSTPCRRKGSKN-VFENKTLKSKEELPLVKRVDNTIPNSFEFITYTR---R 681
I ++ + + S K + N V+EN + K+ + ++ D++I E +
Sbjct: 762 IYDNNNNNNISDSEVDKENNNYVYENDEI-IKDNKSMNEK-DSSIHYDEEGTVKNKDIIE 819
Query: 682 QVKPEN-----ISNG--NNSDNKTDDEDSPQVI---TKPIGSISMRKYETTRQSHLNKPK 731
VK EN + N NN +N+ D + ++I +K + SM +YE P+
Sbjct: 820 NVKEENSDIQMLENDIINNINNEIIDNNENEIINNQSKVENNTSMTEYEDVIDMDYKSPE 879
Query: 732 LFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQ 791
F N E N+ N KS S ERE N ++ +DE + + +
Sbjct: 880 NLFMFDQEYNINEDHKGEINNNDNDNSKSVSGMG-------EREVSNEENREDEMIRNEE 932
Query: 792 VH---PSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARE--NNTKFLADPI 846
V E NT I E+ + + + E N DD + A + + + AD I
Sbjct: 933 VDYIKDDDEHNTDDIKEDDEHNADDIKEDD-EHNVDDIKEDDENNADDIKEDDEHNADDI 991
Query: 847 KDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTV 906
K+ + ++ + + D K D ++D + AD IKE + N + K
Sbjct: 992 KEDDEHNTDDIKEDDEHNT-DDIKEDDEHNADDIKEDDENNADDIKEDDEHNTDDIKEDD 1050
Query: 907 QFHSNSINKGNG-NADVSPMD---TVDIINTIADSSTVDSAINIADPTKIICDKCSQPID 962
+ +++ I + + NAD D T DI + ++ + + AD K D+ + ++
Sbjct: 1051 EHNTDDIKEDDEHNADDIKDDEHNTDDIKDDEHNTDDIKDDEHNADDIK---DEDNDQVE 1107
Query: 963 IN-ELQEH 969
N EL E+
Sbjct: 1108 DNQELNEN 1115
>UNIPROTKB|Q8I544 [details] [associations]
symbol:PFL1835w "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AE014188 RefSeq:XP_001350773.1
ProteinModelPortal:Q8I544 IntAct:Q8I544 MINT:MINT-1559800
EnsemblProtists:PFL1835w:mRNA GeneID:811419 KEGG:pfa:PFL1835w
EuPathDB:PlasmoDB:PF3D7_1237900 OMA:IKEDDEH ProtClustDB:CLSZ2514950
Uniprot:Q8I544
Length = 1188
Score = 136 (52.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 105/488 (21%), Positives = 198/488 (40%)
Query: 509 DKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDI 568
D+ +GD +QI +N +D + + +++F+D VS ++++
Sbjct: 648 DESFVGD-KDQI--FEDDNYVSEREEFKQDESFVGDKDQNFDDDYVSEREDIKQDDDYIS 704
Query: 569 EESLKNVSDVLFNEKVENLTMENKKSIKNECL---SPVSSKSKDLTNENLGHTFETLPSP 625
E D +K +N +N S K E + + +S + + + ++N E +
Sbjct: 705 ERDEIKQDDSFAGDKDQNFEDDNYVSEKEEIIYDNNNISDREQVIQDDNYVSDKEEI--- 761
Query: 626 ILTSDRDIHTSTPCRRKGSKN-VFENKTLKSKEELPLVKRVDNTIPNSFEFITYTR---R 681
I ++ + + S K + N V+EN + K+ + ++ D++I E +
Sbjct: 762 IYDNNNNNNISDSEVDKENNNYVYENDEI-IKDNKSMNEK-DSSIHYDEEGTVKNKDIIE 819
Query: 682 QVKPEN-----ISNG--NNSDNKTDDEDSPQVI---TKPIGSISMRKYETTRQSHLNKPK 731
VK EN + N NN +N+ D + ++I +K + SM +YE P+
Sbjct: 820 NVKEENSDIQMLENDIINNINNEIIDNNENEIINNQSKVENNTSMTEYEDVIDMDYKSPE 879
Query: 732 LFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQ 791
F N E N+ N KS S ERE N ++ +DE + + +
Sbjct: 880 NLFMFDQEYNINEDHKGEINNNDNDNSKSVSGMG-------EREVSNEENREDEMIRNEE 932
Query: 792 VH---PSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARE--NNTKFLADPI 846
V E NT I E+ + + + E N DD + A + + + AD I
Sbjct: 933 VDYIKDDDEHNTDDIKEDDEHNADDIKEDD-EHNVDDIKEDDENNADDIKEDDEHNADDI 991
Query: 847 KDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTV 906
K+ + ++ + + D K D ++D + AD IKE + N + K
Sbjct: 992 KEDDEHNTDDIKEDDEHNT-DDIKEDDEHNADDIKEDDENNADDIKEDDEHNTDDIKEDD 1050
Query: 907 QFHSNSINKGNG-NADVSPMD---TVDIINTIADSSTVDSAINIADPTKIICDKCSQPID 962
+ +++ I + + NAD D T DI + ++ + + AD K D+ + ++
Sbjct: 1051 EHNTDDIKEDDEHNADDIKDDEHNTDDIKDDEHNTDDIKDDEHNADDIK---DEDNDQVE 1107
Query: 963 IN-ELQEH 969
N EL E+
Sbjct: 1108 DNQELNEN 1115
>WB|WBGene00014066 [details] [associations]
symbol:rev-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001126 InterPro:IPR012112
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PIRSF:PIRSF036573 PROSITE:PS50173 InterPro:IPR001357 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 EMBL:Z46812 KO:K03515
PIR:T27970 RefSeq:NP_495663.1 ProteinModelPortal:Q09615 SMR:Q09615
IntAct:Q09615 MINT:MINT-227346 STRING:Q09615 EnsemblMetazoa:ZK675.2
GeneID:174275 KEGG:cel:CELE_ZK675.2 UCSC:ZK675.2 CTD:174275
WormBase:ZK675.2 HOGENOM:HOG000016674 InParanoid:Q09615 OMA:DWITESI
NextBio:883331 Uniprot:Q09615
Length = 1027
Score = 98 (39.6 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 30/115 (26%), Positives = 51/115 (44%)
Query: 9 IDMDCFYCQVECKLNPSLHGKPLAVVQYNTWKGGGIIAV---NYEARHKGVTRHMRGDEA 65
+D+DCF+ V + L K +A+ + V +Y AR GV M +A
Sbjct: 443 VDLDCFFVSVAVRNRIDLKHKEVAITHSKGTISNSMSEVASCSYAARDCGVKNGMLVRDA 502
Query: 66 KQHCPEIELCRVPSVRGKADISKYRNAGREVIAVLSEFSNIVERASIDEAYIDLT 120
Q CP++ L +P Y R++ +L+ ++ V S DE YI+++
Sbjct: 503 LQKCPQLTL--LPY-----QFEDYVQVSRKIYEILASYTLEVRAVSCDEMYINMS 550
Score = 90 (36.7 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 190 VIVEEIRAAVLSKTQFHCSAGIAHNKVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIKK 249
++ E IR + KTQ S GI +LA+L KP + + +S +K
Sbjct: 563 ILAEHIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDGVFWVNAHKKNEF---ISEEK 619
Query: 250 VRHLGGKLGDEVVETL-----QCSTMLELEKFSLKQLQSHFEEKTASWLYYIARGIDHEP 304
V+ L G G E++ L + EL+ + ++L F K AS + RGI+ +P
Sbjct: 620 VKDLPG-FGYEMMNRLTSFFGDITKCRELQLKTERELVPVFGPKLASKILRQCRGIEEDP 678
Query: 305 VN--ARLVSKSIGC 316
+ A V KS+ C
Sbjct: 679 DDFWATHVRKSVSC 692
Score = 45 (20.9 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 468 TLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNI 523
TLLN+ + + F+ + E +D S+ D+ +V L++ I E+ K++
Sbjct: 934 TLLNYGKLSAFETVFRKFEEISMDS------SRCDTAWFSVFHLMVPFIEEESKDL 983
Score = 38 (18.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 526 ENVRKYLRTHSKDSNASDEDEES---FNDKLVSIEREVEESVGKDIEESLKNVSDVLFN 581
E V+ L D+N ED E ++L +E ++ K+ +L+ + L N
Sbjct: 879 EIVKSTLLNGRSDNNLELEDLEDDGLVENRLAELECIIQNEPTKESVTNLQEMLSTLLN 937
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 21/101 (20%), Positives = 49/101 (48%)
Query: 514 GDISEQIKNIAAENVRKYLRTHSKDSNASDEDEE----SFNDKLVSIEREVEESVGKDIE 569
G + ++K AA V++ S+ N + DE+ N+ + E + +V +D+E
Sbjct: 800 GKLKSKLKKDAATAVQEMFGKTSRVGNMARTDEQLNIIPRNEDELDKEPVIIPAVTEDLE 859
Query: 570 ESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDL 610
++++ + N +V N ++ + +K+ L+ S + +L
Sbjct: 860 --VQSIPRQI-NFRVAN-DIDIPEIVKSTLLNGRSDNNLEL 896
>GENEDB_PFALCIPARUM|PF14_0404 [details] [associations]
symbol:PF14_0404 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 140 (54.3 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 126/566 (22%), Positives = 233/566 (41%)
Query: 429 SHPSIQQFFKPQDHPEPMTSE-HSSLPEQSTNHDSKKRDKTLLNFNQQT-PFQLALNRIE 486
SH + Q+ F P + + E H+++ + D++++ ++ N ++ P N I+
Sbjct: 1587 SHENDQEHFTPYE--SRINKEFHTNVDYNIVSGDNEEKGISVKNISEDIIPDGKGKN-IQ 1643
Query: 487 RKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNA-SDED 545
+I + + E+K N DK I D +++ K I+ EN + + N SDE+
Sbjct: 1644 DDII--LEENGENKNFEENIEEDK--ISDKTQKSK-ISHENAEGHFTPYESGKNKISDEN 1698
Query: 546 EESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSS 605
+ +N ++ ++ EE K I E+ N++ + + + NK N ++
Sbjct: 1699 DVEYNISDINTNKDQEEVESKRIFETNDNINKHISSSDNNKI---NKMKQNNILINESQD 1755
Query: 606 KSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFE-NKTLKSKEELPLVKR 664
K+ D+ N+ + L + +TSD + KN N K +EE VK
Sbjct: 1756 KNIDVHNK----LDKILKNEHVTSDESLEKIKEENGNTRKNKGSINNEEKIEEEKENVKN 1811
Query: 665 VDNTIPNSFEFITYTRRQVKPENISNGNNSDN--KTDDEDSPQVITKPIGSISMRKYETT 722
D TI E T + +K + ISN N + N TD+ + + G ETT
Sbjct: 1812 -DETIIGKKEENTESD-DLKIQKISNENINKNILYTDNYNKDKSYNAQ-GGTHGENDETT 1868
Query: 723 RQSHLNKPKLFADFPTT---SQGNNPDTHEPPNSSNKRGKSYSF-FENYLRRKKERERLN 778
++++ L + S+G N NK S N L K +E L+
Sbjct: 1869 NGTNISNDGLDKNVKIDQYISKGENI------LQENKEDIIPSVTINNSLGDKYVKENLS 1922
Query: 779 SKSCKDETLTHGQVHP-SVETNTHTILEEVTSSIETVDNGSIETNAMT--RIRDDIHLAR 835
+ K + H + + E T ++ + E +E N +I +++L+
Sbjct: 1923 PEDIKKMEVAHKNIQNITSEDELGTQKKDNERNKEDKSPNGVEENHQENDKIIGEVNLSN 1982
Query: 836 EN-NTKFL--ADPIKDTESTGPSNV-----ISTESNEVIDQTKIRDVSSSDHSQMTSATK 887
N N + +D I N+ +++E+NE+ + + +++ S++ + + +
Sbjct: 1983 MNMNESNIGNSDTINQHLLNEGKNIHHKGNVNSETNEMTNNSGTQNIISNEQFEK-NIIR 2041
Query: 888 ADFIKESGDPNNEMCKSTVQFHSN-SINKGNGNADVSPMDTVDIINT-IADSSTVDSAIN 945
D IK D NE K + +N INK N NA + ++ + I N DS D + N
Sbjct: 2042 GDDIK---DKMNENVKIEDETGNNIKINKYNDNAKI--LNELIIKNQGTQDSDADDISTN 2096
Query: 946 IADPTKIICDKCSQPIDINELQEHQD 971
+D I +K IN + +D
Sbjct: 2097 GSDKMDQIENKNENIHKINNVNVEKD 2122
>UNIPROTKB|Q8IL45 [details] [associations]
symbol:TREP "TRAP-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 140 (54.3 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 126/566 (22%), Positives = 233/566 (41%)
Query: 429 SHPSIQQFFKPQDHPEPMTSE-HSSLPEQSTNHDSKKRDKTLLNFNQQT-PFQLALNRIE 486
SH + Q+ F P + + E H+++ + D++++ ++ N ++ P N I+
Sbjct: 1587 SHENDQEHFTPYE--SRINKEFHTNVDYNIVSGDNEEKGISVKNISEDIIPDGKGKN-IQ 1643
Query: 487 RKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNA-SDED 545
+I + + E+K N DK I D +++ K I+ EN + + N SDE+
Sbjct: 1644 DDII--LEENGENKNFEENIEEDK--ISDKTQKSK-ISHENAEGHFTPYESGKNKISDEN 1698
Query: 546 EESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSS 605
+ +N ++ ++ EE K I E+ N++ + + + NK N ++
Sbjct: 1699 DVEYNISDINTNKDQEEVESKRIFETNDNINKHISSSDNNKI---NKMKQNNILINESQD 1755
Query: 606 KSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFE-NKTLKSKEELPLVKR 664
K+ D+ N+ + L + +TSD + KN N K +EE VK
Sbjct: 1756 KNIDVHNK----LDKILKNEHVTSDESLEKIKEENGNTRKNKGSINNEEKIEEEKENVKN 1811
Query: 665 VDNTIPNSFEFITYTRRQVKPENISNGNNSDN--KTDDEDSPQVITKPIGSISMRKYETT 722
D TI E T + +K + ISN N + N TD+ + + G ETT
Sbjct: 1812 -DETIIGKKEENTESD-DLKIQKISNENINKNILYTDNYNKDKSYNAQ-GGTHGENDETT 1868
Query: 723 RQSHLNKPKLFADFPTT---SQGNNPDTHEPPNSSNKRGKSYSF-FENYLRRKKERERLN 778
++++ L + S+G N NK S N L K +E L+
Sbjct: 1869 NGTNISNDGLDKNVKIDQYISKGENI------LQENKEDIIPSVTINNSLGDKYVKENLS 1922
Query: 779 SKSCKDETLTHGQVHP-SVETNTHTILEEVTSSIETVDNGSIETNAMT--RIRDDIHLAR 835
+ K + H + + E T ++ + E +E N +I +++L+
Sbjct: 1923 PEDIKKMEVAHKNIQNITSEDELGTQKKDNERNKEDKSPNGVEENHQENDKIIGEVNLSN 1982
Query: 836 EN-NTKFL--ADPIKDTESTGPSNV-----ISTESNEVIDQTKIRDVSSSDHSQMTSATK 887
N N + +D I N+ +++E+NE+ + + +++ S++ + + +
Sbjct: 1983 MNMNESNIGNSDTINQHLLNEGKNIHHKGNVNSETNEMTNNSGTQNIISNEQFEK-NIIR 2041
Query: 888 ADFIKESGDPNNEMCKSTVQFHSN-SINKGNGNADVSPMDTVDIINT-IADSSTVDSAIN 945
D IK D NE K + +N INK N NA + ++ + I N DS D + N
Sbjct: 2042 GDDIK---DKMNENVKIEDETGNNIKINKYNDNAKI--LNELIIKNQGTQDSDADDISTN 2096
Query: 946 IADPTKIICDKCSQPIDINELQEHQD 971
+D I +K IN + +D
Sbjct: 2097 GSDKMDQIENKNENIHKINNVNVEKD 2122
>FB|FBgn0260965 [details] [associations]
symbol:CG42588 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 EMBL:AE014296 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 GeneTree:ENSGT00550000074593
KO:K15200 FlyBase:FBgn0260965 RefSeq:NP_648604.2 IntAct:Q9VU16
MINT:MINT-283631 EnsemblMetazoa:FBtr0301717 GeneID:39457
KEGG:dme:Dmel_CG42588 UCSC:CG11008-RA InParanoid:Q9VU16 OMA:LYHPPKM
PhylomeDB:Q9VU16 GenomeRNAi:39457 NextBio:813742
ArrayExpress:Q9VU16 Bgee:Q9VU16 Uniprot:Q9VU16
Length = 2730
Score = 138 (53.6 bits), Expect = 0.00011, P = 0.00011
Identities = 103/430 (23%), Positives = 174/430 (40%)
Query: 515 DISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKN 574
+I + +KN AA++ + R H SD+ + S D S + +++ IE+S +
Sbjct: 1186 EIQQPVKNSAADSKFTFDR-HQVVGAFSDDSDSS--DAGPSSPMDFGDNMS--IEDSRTS 1240
Query: 575 VSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIH 634
DV K+ N EN+K +E LSP SKS + + L + +
Sbjct: 1241 EEDVTAWAKLVN---ENEKPFVDEVLSP--SKSGTEATVDCSRIDDPLKTDGEATSSHHS 1295
Query: 635 TSTP-CRRKGSKNVFENK--TLKSKEELPLVKRVDNTIPNSFEFITYTRRQ-VKPENISN 690
TP C SK V + K +K K+ + L ++ + + S + I T + VK + ++
Sbjct: 1296 EITPFCASSESKCVTDEKQPVIKEKDSITLDRKSEKSRRMSTKSILMTTDEHVKDSSTTS 1355
Query: 691 GNNSDNKTDDEDSPQVITKPIGSISMRKYE----TTRQS-HLNKPKLFADFPTTSQGNNP 745
N T SP + +R E + +Q+ HL P+ + N
Sbjct: 1356 KINEKRLTS---SPLKTPGSSENTELRLLEEGNASDKQNEHLISPEALTNQKNAKLKKNL 1412
Query: 746 DTHEP--PNSS-NKRGKSYSFFENYLRRKKERERLNSKSC--KDETLTHGQVHPSVETNT 800
+ P P SS RGK S N + E+ N SC K+E T + + T
Sbjct: 1413 EEVSPEKPVSSLRSRGKRKSGSHNKKLDESEKHSENI-SCAKKEEKATERDLEDGEQLTT 1471
Query: 801 HTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVIST 860
E+ S+ +DN + E A+ R + +++ K + D +D + ++ T
Sbjct: 1472 VDSTEDTDSTRNPIDNITAENTAIRAKRKTRCIVSKDSKKEMKDLKEDGVKSSKDDLPPT 1531
Query: 861 -ESNEVIDQTKIRDVSS-SDHSQMT-SATKADFIKESGDPNNEMCKSTVQFHSNSINKGN 917
+S+E + K+ DV S S+ T + +A E E +TV NS +K
Sbjct: 1532 MDSSEKPEDQKLDDVPDVSVKSKGTRKSLRASLNNEVPAIQPEPVINTVSSSENSTSKME 1591
Query: 918 GNADVSPMDT 927
+ P DT
Sbjct: 1592 -DVVTEPNDT 1600
>GENEDB_PFALCIPARUM|PF10_0037 [details] [associations]
symbol:PF10_0037 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014185 HSSP:Q93IC2 RefSeq:XP_001347322.1
ProteinModelPortal:Q8IK03 EnsemblProtists:PF10_0037:mRNA
GeneID:810195 KEGG:pfa:PF10_0037 EuPathDB:PlasmoDB:PF3D7_1003400
Uniprot:Q8IK03
Length = 2050
Score = 135 (52.6 bits), Expect = 0.00017, P = 0.00017
Identities = 100/458 (21%), Positives = 191/458 (41%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSI 595
+K ++ ++D + NDK +S + E ++ ++ KN+ + ++N N N K
Sbjct: 123 NKCAHYINKDMKYINDKNISCLKNNENNIVNNLSYLNKNIYNKIYNNNNNN---NNDKLN 179
Query: 596 KNECLSPVS-SKSKDLTNENLGHTFETLPSPILTSDRDIHTSTP--CRRKGSKNVFENKT 652
N S + S K++ N+ H F I DI + RK S+N +N+
Sbjct: 180 YNNSTSNIGRSTQKNIAQYNM-HPFVKYEL-IWDVKNDIARNKNYFVIRKKSEN--DNQN 235
Query: 653 LKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVI---TK 709
+++KEE +++ N I S+ Y + +K EN N N N + I K
Sbjct: 236 IENKEE-DKKRKIKNNIIKSY----YKKLNIK-ENNKNTNKQTNDIYTIGQGKYIPINNK 289
Query: 710 PIGSISMRKYETTRQSHLNKPKLF--ADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENY 767
PI ++S+ S+ NK LF + F +Q + ++ +N K F++
Sbjct: 290 PIYNLSLNNNYI---SYDNKECLFHNSTFFLNTQMTMNNNYKDIKFNNIDKKKNLLFQSS 346
Query: 768 LRRKKERERLNSKS-CKDETLTH-GQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMT 825
+ + + KS ++ +T G + ++ N +T T + +NG +
Sbjct: 347 EKNNTSNKTVTHKSNLLNKNVTQKGNLLNNINKN-NTYNANNTYNANNTNNGKVSH---- 401
Query: 826 RIRDDIHLAREN----NTKFLADPIKDTESTGPSNVISTESNEV--IDQTKIRDVSSSDH 879
++ D H+++EN N K K E N T N I K + +S ++
Sbjct: 402 KLSAD-HMSKENLNNFNKKTEEKKEKKEEEEEIKNKKKTIKNSCQNIQNNKDKMISQNEK 460
Query: 880 SQMTSATKADFI--------KESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDII 931
S +++ +K + + KE+ NN++ +Q +N IN + +++ +
Sbjct: 461 SNISNLSKINHVLVLKNVNKKETNKNNNQVISDNIQNDNNIINVPS-EENITKDECSKES 519
Query: 932 NTIADSSTVDSAIN---IADPTKIICDKCSQPI-DINE 965
N D +S + + +K I D+C+Q DIN+
Sbjct: 520 NKSNDECIQESNKSNDEFSKESKDINDECTQESKDIND 557
>UNIPROTKB|Q8IK03 [details] [associations]
symbol:PF10_0037 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014185 HSSP:Q93IC2 RefSeq:XP_001347322.1
ProteinModelPortal:Q8IK03 EnsemblProtists:PF10_0037:mRNA
GeneID:810195 KEGG:pfa:PF10_0037 EuPathDB:PlasmoDB:PF3D7_1003400
Uniprot:Q8IK03
Length = 2050
Score = 135 (52.6 bits), Expect = 0.00017, P = 0.00017
Identities = 100/458 (21%), Positives = 191/458 (41%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSI 595
+K ++ ++D + NDK +S + E ++ ++ KN+ + ++N N N K
Sbjct: 123 NKCAHYINKDMKYINDKNISCLKNNENNIVNNLSYLNKNIYNKIYNNNNNN---NNDKLN 179
Query: 596 KNECLSPVS-SKSKDLTNENLGHTFETLPSPILTSDRDIHTSTP--CRRKGSKNVFENKT 652
N S + S K++ N+ H F I DI + RK S+N +N+
Sbjct: 180 YNNSTSNIGRSTQKNIAQYNM-HPFVKYEL-IWDVKNDIARNKNYFVIRKKSEN--DNQN 235
Query: 653 LKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVI---TK 709
+++KEE +++ N I S+ Y + +K EN N N N + I K
Sbjct: 236 IENKEE-DKKRKIKNNIIKSY----YKKLNIK-ENNKNTNKQTNDIYTIGQGKYIPINNK 289
Query: 710 PIGSISMRKYETTRQSHLNKPKLF--ADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENY 767
PI ++S+ S+ NK LF + F +Q + ++ +N K F++
Sbjct: 290 PIYNLSLNNNYI---SYDNKECLFHNSTFFLNTQMTMNNNYKDIKFNNIDKKKNLLFQSS 346
Query: 768 LRRKKERERLNSKS-CKDETLTH-GQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMT 825
+ + + KS ++ +T G + ++ N +T T + +NG +
Sbjct: 347 EKNNTSNKTVTHKSNLLNKNVTQKGNLLNNINKN-NTYNANNTYNANNTNNGKVSH---- 401
Query: 826 RIRDDIHLAREN----NTKFLADPIKDTESTGPSNVISTESNEV--IDQTKIRDVSSSDH 879
++ D H+++EN N K K E N T N I K + +S ++
Sbjct: 402 KLSAD-HMSKENLNNFNKKTEEKKEKKEEEEEIKNKKKTIKNSCQNIQNNKDKMISQNEK 460
Query: 880 SQMTSATKADFI--------KESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDII 931
S +++ +K + + KE+ NN++ +Q +N IN + +++ +
Sbjct: 461 SNISNLSKINHVLVLKNVNKKETNKNNNQVISDNIQNDNNIINVPS-EENITKDECSKES 519
Query: 932 NTIADSSTVDSAIN---IADPTKIICDKCSQPI-DINE 965
N D +S + + +K I D+C+Q DIN+
Sbjct: 520 NKSNDECIQESNKSNDEFSKESKDINDECTQESKDIND 557
>DICTYBASE|DDB_G0289043 [details] [associations]
symbol:DDB_G0289043 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR002867 Pfam:PF01485 PROSITE:PS50089 SMART:SM00343
SMART:SM00647 dictyBase:DDB_G0289043 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:AAFI02000129 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG327249 RefSeq:XP_636442.1
ProteinModelPortal:Q54I29 SMR:Q54I29 EnsemblProtists:DDB0188232
GeneID:8626935 KEGG:ddi:DDB_G0289043 InParanoid:Q54I29 OMA:HMNSITI
Uniprot:Q54I29
Length = 1818
Score = 149 (57.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 89/449 (19%), Positives = 180/449 (40%)
Query: 505 NANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDK---LVSIEREVE 561
N + D G + +IK + +K ++ +++N D+++ES N+K + I E
Sbjct: 743 NTSSDTTTSGTNTTKIKTSDQDKDKK---SNIEENNNEDDEDESLNEKYNKMNDISNSFE 799
Query: 562 ESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFE- 620
S ++ + SD +E VE L EN K N +++++ N+ G ++
Sbjct: 800 SSTTRE-DLYYDQESD---DEAVEQLN-ENNKQTHNHQHQHHFNQAQNFVNKRFGTKYDF 854
Query: 621 TLPSPILTSDRDIHTST-PCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYT 679
+ P P S R I T + K N NK K E L R T+ +S + T++
Sbjct: 855 SNPPP---SPRPIRRLTFVTKLKKDNNDLSNKPTKQSETLE--SRNITTLGSSNDQQTHS 909
Query: 680 RRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPT- 738
N + N++ T+ + T + + T S L + P
Sbjct: 910 SNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT--NTNTNTNTTKNYSKDQNNTLIEEKPNC 967
Query: 739 TSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVET 798
T+ NN + + N++N + S N + +N+ + + +
Sbjct: 968 TNNNNNNNNNNNNNNNNNNNNNNSSNGNNITNTNTNNSINNNNNNNNNNNNNN-----NN 1022
Query: 799 NTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVI 858
N L S + T ++ +TN+ ++I + E+ T F P T ++V+
Sbjct: 1023 NNPMSLSSENSFLCTTEDID-KTNSTFTFNNEIS-SDESETGFPTPPPLTRSLTNNNHVL 1080
Query: 859 --STESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKG 916
S N + + ++ S+D +++ T+ + + + NN + ++N+ N
Sbjct: 1081 CSSNNKNNPNNVSNSNNIISNDQNEIVE-TQRENNNNNNNNNNNNNNNNNNNNNNNNNNN 1139
Query: 917 NGNADVSPMDTVDIINTIADSSTVDSAIN 945
N N + S ++ N+ ++S++ +S N
Sbjct: 1140 NNNNNNSNSNSNSNSNSNSNSNSSNSNSN 1168
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 260 EVVET-LQCS-TMLELEKFSLKQLQSHFEEKTASWLY 294
E++ T L CS T+L K+++ L F EK +++
Sbjct: 333 EILGTSLLCSSTLLLFFKWNMDLLLQRFVEKGEEYVF 369
>UNIPROTKB|E2R1I5 [details] [associations]
symbol:CCDC39 "Coiled-coil domain-containing protein 39"
species:9615 "Canis lupus familiaris" [GO:0060285 "ciliary cell
motility" evidence=ISS;IMP] [GO:0060286 "flagellar cell motility"
evidence=IMP] [GO:0060287 "epithelial cilium movement involved in
determination of left/right asymmetry" evidence=IMP] [GO:0035085
"cilium axoneme" evidence=ISS] [GO:0070286 "axonemal dynein complex
assembly" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
GO:GO:0005737 GO:GO:0005856 GO:GO:0035085 GO:GO:0070286
GO:GO:0060285 GO:GO:0060287 GO:GO:0060286 Uniprot:E2R1I5
Length = 939
Score = 131 (51.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 72/295 (24%), Positives = 136/295 (46%)
Query: 455 EQSTNHDSKKR----DKTLLNFNQQTPFQL-ALNRIERK-LIDKFKSHIE---SKLDSCN 505
E N + +KR D+ LL +T +Q NR + K +D K+ + S L++
Sbjct: 272 EIGNNTEYEKRISVADRKLLKC--RTEYQHHETNRNQLKDELDSLKATVNRSSSDLEALR 329
Query: 506 ANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIE---REVEE 562
N+ K+ DI E+ + + ++ + ++ K E S +K ++E RE E+
Sbjct: 330 KNISKIK-KDIQEETARL--QKIKNHNQSVKKKLKQITEKTMSVEEKATNLEDMLREEEK 386
Query: 563 SVGKDIEESLKNVSDVLFNEKVENLTME--NKKSIKNECLSPVSSKSKDLTNENLGHTFE 620
SV K++E L V DVLF +KV+ L E +K++ +E + S K L ++ FE
Sbjct: 387 SV-KEVEVQLNIVKDVLF-KKVQELQTEAMKEKAVVSE-IEGTRSSLKHLNHQLHKLDFE 443
Query: 621 TLPSPILTSDRDIHTSTPCRR----KGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFI 676
TL + +D + RR KG N E + L++K + +K++ ++F+ +
Sbjct: 444 TLKQQEIMYSQDFYIQQVERRMSRLKGEINSEEKQALETK--IVELKKILEEKKSTFDLL 501
Query: 677 TYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPK 731
+++ ++ S++K DE Q + + +++ + + LNK K
Sbjct: 502 ESQIKKLH-NDLYFIKKSNSKNCDEK--QFLMTKVNELNL--FNDRSEKELNKTK 551
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 22/94 (23%), Positives = 39/94 (41%)
Query: 780 KSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNT 839
K KDETL + + H I++E+ + + T +N I T + + E T
Sbjct: 814 KDTKDETLEEQDIKLREVKHFHKIIDEMLAEV-TEENAEIHIILQTYFQQN---GLELPT 869
Query: 840 KFLADPIKDTESTGPSNVISTESN-EVIDQTKIR 872
+ + S ++++S S V QT I+
Sbjct: 870 AGTKGSRQSSRSPSQTSLLSARSTTSVASQTSIK 903
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 257 LGDEVVETLQCSTMLELEKFS--LKQLQSHFEEKTASW 292
L +E+ ETL S LEL+K + +++ + +E W
Sbjct: 192 LDNELTETL--SAQLELDKAAQDFRKIHNERQELIKQW 227
>ZFIN|ZDB-GENE-040426-2482 [details] [associations]
symbol:stxbp2 "syntaxin binding protein 2"
species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006904 "vesicle docking involved in exocytosis"
evidence=IEA] InterPro:IPR001619 Pfam:PF00995 PIRSF:PIRSF005715
ZFIN:ZDB-GENE-040426-2482 PANTHER:PTHR11679 GO:GO:0006904
eggNOG:COG5158 SUPFAM:SSF56815 HOGENOM:HOG000232146
HOVERGEN:HBG052710 OrthoDB:EOG4K6G3W CTD:6813 KO:K15300
EMBL:BC068392 IPI:IPI00483811 RefSeq:NP_998454.1 UniGene:Dr.159647
ProteinModelPortal:Q6NUX6 SMR:Q6NUX6 STRING:Q6NUX6 PRIDE:Q6NUX6
GeneID:406578 KEGG:dre:406578 InParanoid:Q6NUX6 NextBio:20818134
ArrayExpress:Q6NUX6 Bgee:Q6NUX6 Uniprot:Q6NUX6
Length = 595
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 67/286 (23%), Positives = 125/286 (43%)
Query: 465 RDK-TLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNI 523
RDK LL+ + + QL I + K + DS N DK I D+S+ +K +
Sbjct: 276 RDKEVLLDEDDELWVQLRHMHIA-DVTKKVTELLRVFCDSKRMNTDKANIKDLSQMLKKM 334
Query: 524 AAENVRKYLRTHSKDSNASDEDEESFN---DKLVSIEREV---EESVGKDIEESLKNVSD 577
+K L +S N +D + F DKL +E+++ ++ G+ +++++K++
Sbjct: 335 P--QYQKELSLYSTHLNLADACMKKFKNTLDKLCEVEQDLAMGSDAQGEPLKDAMKSIVP 392
Query: 578 VLFNEKVENLT---------MENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILT 628
VL N ++++ KK I E L+ + + ++N+ + L PI+T
Sbjct: 393 VLLNTEIKDYDKIRIILLYIFHKKKGIGEENLTKLIQHANVQQDKNIITNLQHLGCPIIT 452
Query: 629 SDRDIHTSTPCRRKGSKNVFENK----TLKSKEELPLVKRVDNTI-PNSFEF--ITYTRR 681
+ S P R++ +++ ++ LK E + + D P E IT T
Sbjct: 453 GGANSGKSLPDRKERTESTYQLSRWIPVLKDVMENIIDDKCDRKQWPFLSEPAPITTTAT 512
Query: 682 QVKPENISNGNNSDNKTDDEDSPQVITKPIGSIS---MR-KYETTR 723
V + + + + T+ P++I IG ++ MR YE TR
Sbjct: 513 TVSSARFGHWHKNKSATEYRSGPRLIIFVIGGVTHSEMRCAYEVTR 558
>DICTYBASE|DDB_G0267854 [details] [associations]
symbol:gxcD "calponin homology (CH) domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000219 InterPro:IPR000048 InterPro:IPR001715
InterPro:IPR001849 InterPro:IPR003128 Pfam:PF00307 Pfam:PF00621
Pfam:PF02209 PROSITE:PS50010 PROSITE:PS50021 PROSITE:PS50096
PROSITE:PS51089 SMART:SM00015 SMART:SM00033 SMART:SM00233
SMART:SM00325 dictyBase:DDB_G0267854 GO:GO:0007010
GenomeReviews:CM000150_GR GO:GO:0005543 EMBL:AAFI02000003
GO:GO:0005622 Gene3D:1.10.950.10 SUPFAM:SSF47050 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:1.10.418.10
SUPFAM:SSF47576 eggNOG:COG5422 GO:GO:0035023 InterPro:IPR003096
PRINTS:PR00888 ProtClustDB:CLSZ2431532 RefSeq:XP_647356.1
ProteinModelPortal:Q55G27 EnsemblProtists:DDB0231995 GeneID:8616167
KEGG:ddi:DDB_G0267854 InParanoid:Q55G27 OMA:FTEIQSI Uniprot:Q55G27
Length = 1063
Score = 143 (55.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 102/531 (19%), Positives = 204/531 (38%)
Query: 456 QSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGD 515
Q +N+++ + T +N N++ +Q + + ++D S LD + + D L++
Sbjct: 516 QYSNYNNNNNNNTTINENRKVKYQGMIELVTCVVVDDSHPSPSSHLDIRSNDKDNLLLLT 575
Query: 516 ISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNV 575
I KN +N K + + SN E++ S K++ E S + + N
Sbjct: 576 IIS--KNETEKNNLK-IEINKLISNIH-ENQRSKEQKII------ENSSNNNNNNNNNNN 625
Query: 576 SDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHT 635
+ + E + T+E + S + + + V S S + T T T + + ++ T
Sbjct: 626 NTAV--ENIPEPTIEQQLSERKKIMKRVESNSINSTATTTATTTTTTTNTSINTNTTSTT 683
Query: 636 --STPCRRKGSKNV--FENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNG 691
++P R S N+ + + ++ +P+ + + +Y + P + N
Sbjct: 684 PINSPSRNNSSNNINIVPPTSPEQQQSIPVSSFISSLFNKKKSSSSYNAT-LSPNKVENN 742
Query: 692 NN-SDNKTDDEDSPQV-ITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHE 749
SD+++ SPQ + P + + E+ + S K A + S N P T
Sbjct: 743 TPISDSESSGNTSPQSPSSSPTTTTTTYVDESEKSSPKTSRKKKAQSISMSPTNTPTT-P 801
Query: 750 PPNSSNKRGKSYSFFEN----YLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILE 805
PP S + + S N KE+ R SKS + G + ++ +++
Sbjct: 802 PPQSEDTNNSNDSSSNNNNAEIQEPPKEKGRPRSKSTSRLSRITGVL--TLRKRKTQLVD 859
Query: 806 EVTSSIETVDN-GSIETNAMTRIRDDIHLARENNTKFLADPI---KDTESTGPS-NVIST 860
E S I T D+ G + ++ D+ ++ N T + +D S S + +S
Sbjct: 860 E--SQIPTSDDEGQTSPTSPSKSSIDLSQSQHNPTPHSSSSSSSQQDDSSLASSISPLSI 917
Query: 861 ESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQF--HSNSINKGNG 918
+ I T + +++ + S T S + + S+ ++N N
Sbjct: 918 STPNPIPVTALASTTTTTATTNNSTTSNTASPNSSATTHRLSSSSTNLSTNNNECEPSNN 977
Query: 919 NADVSPMDTVDIINTIADSSTVDSAINIADPTKIICDKCSQPIDINELQEH 969
A S D ++ + S+ + N KII K +D L+ +
Sbjct: 978 KAGSSTSDLQSPTSSSSSPSSSTATTNNLSYEKIIAQKSLGELDPLNLETY 1028
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1011 PSKLNSFKNSENFKKLKTID--QFFK-PK 1036
P L ++ ++ +FKKL ++ +F K PK
Sbjct: 1022 PLNLETYLSNADFKKLFGVERSEFLKFPK 1050
>DICTYBASE|DDB_G0279041 [details] [associations]
symbol:DDB_G0279041 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279041 EMBL:AAFI02000026 RefSeq:XP_641933.1
EnsemblProtists:DDB0266471 GeneID:8621845 KEGG:ddi:DDB_G0279041
OMA:NNGMMNQ Uniprot:Q54XC8
Length = 637
Score = 127 (49.8 bits), Expect = 0.00030, P = 0.00030
Identities = 81/398 (20%), Positives = 155/398 (38%)
Query: 601 SPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELP 660
S +S+ + + NEN + L + I +D + + ++ N S +
Sbjct: 146 SVISTPTSSIYNENENNNINNLNNNINNTDNTCNILNNNNNSNNNDMNNNNNNNSNNQNE 205
Query: 661 LVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDD---EDSPQVITKPIGSISMR 717
+ N PN +E + Q + EN +N NN++NK +D E++ IT P +I +
Sbjct: 206 VTNINSNISPN-YE----NQNQNQNENENNSNNNNNKPNDNLVENNTNQITNP-NNIDQQ 259
Query: 718 KYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFEN-YLRRKKERER 776
+ Q LN+ + + NN + + N+S + Y +F N L
Sbjct: 260 Q----EQPQLNQ----VENKINNNSNNNNINNNNNNSGEFCPDYVYFVNKQLNEFSNCLP 311
Query: 777 LNSKSCKDETLT-HGQVHPSVETNTHTILEEVT--SSIETVDNGSIETNAMTRIRDDIHL 833
+ K D T G + P++ ++ + T S+ ++ + S E N T + H
Sbjct: 312 ILEKDMPDFASTIKGIISPNIVGSSIKNENKSTPNSTSTSIASYSFELNPSTPLDGVSHT 371
Query: 834 ARENN------TKFLADPIKDTESTGPSNVISTESNEVIDQTKIRD------VSSSDHSQ 881
++ + T D I++ T + ++T +N+ T +SSS S
Sbjct: 372 IQQTSPSTQPSTPVSNDIIENNSITASTQNVNTVNNQTTTTTTSTTYTSTFALSSSSSSS 431
Query: 882 MTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVS---PMDTVDIINTIADSS 938
+S++ K+ G P + + NS++ + +S P T T ++
Sbjct: 432 SSSSSSNGSGKKRGRPPRAKSSTDLIGSPNSLSNSSSTVVLSASTPSSTTSTTTTTTTTT 491
Query: 939 TV-----DSAINIADPTKIICDKCSQPIDINELQEHQD 971
T ++ +I K +C C +P N +H D
Sbjct: 492 TSGTPTGETLESIESKRKYLCQYCKKPKK-NHKCDHPD 528
>GENEDB_PFALCIPARUM|PFC0715c [details] [associations]
symbol:PFC0715c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 PROSITE:PS51203 EMBL:AL844502 PIR:T18508
RefSeq:XP_001351234.1 ProteinModelPortal:O77391
EnsemblProtists:PFC0715c:mRNA GeneID:814478 KEGG:pfa:PFC0715c
EuPathDB:PlasmoDB:PF3D7_0316400 HOGENOM:HOG000283219
ProtClustDB:CLSZ2500478 Uniprot:O77391
Length = 1008
Score = 117 (46.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 79/319 (24%), Positives = 134/319 (42%)
Query: 462 SKKRDKTLLN--FNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQ 519
+KKR+K +N F + + + +IDK KS S + + ++ + I +
Sbjct: 140 NKKRNKKRVNHVFMDKNLGDIFESNKTEGIIDKNKS---SNVINNDSEYNHPNIHNNEGT 196
Query: 520 IKNIAAEN-VRKYLRTHSKDSN---ASDEDEESFNDKLVSIEREVEESVGKDIEESLKNV 575
NI N + + + H DSN A + EE K I E+ K I E +K+
Sbjct: 197 YNNIDENNPMYEGMPNHLSDSNLESAMKKAEEYIKGKEDDIIERREKEKKKKIVEKMKDD 256
Query: 576 SDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHT 635
DV F +K+ +L + + +K + + S +L N N+ ++ S + ++++I
Sbjct: 257 EDV-FTDKLLDLRIYDM--LKYVYRNNIYRTSHELVN-NICMWMKSTYSNYVDTNKEIQR 312
Query: 636 STPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKP------ENIS 689
+++ K E K K KEEL + + ++ I Y R V E+I
Sbjct: 313 REKKKQEEEKKDEEEKN-KKKEELINISDNEKDTKHNETNINYKRVNVNDKDVNIHEDII 371
Query: 690 NGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQ-SHLNKPKLFADFPTTSQGNNPDTH 748
G + KTDDE ++I K I + Y R +LN F+ F ++ N +
Sbjct: 372 KGKKAKEKTDDEIQSEIIEKDIST----NYSKDRNVQYLNT---FS-FDKNNEKLNSEM- 422
Query: 749 EPPNSSNKRGKSYSFFENY 767
E NK+ S FF Y
Sbjct: 423 ESLKLYNKKNLSKYFFSLY 441
Score = 63 (27.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 836 ENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESG 895
+NN L DP T+ G N + E+I+ K+ D D + SA ++ES
Sbjct: 666 QNNMITLGDPSNSTK--GVDNYTN---KEMIN--KLSD-DKKDALKKNSAE----VEESS 713
Query: 896 DPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIICD 955
NN + K+ + +S +++ N D + V+ + + + V++ N+ + I
Sbjct: 714 SKNN-VTKNVLLNNSQNVSIANLK-DEQIVKNVENVKNVENVKNVENVKNVENVEMIKSS 771
Query: 956 KCSQPID 962
C++ +D
Sbjct: 772 PCNEVVD 778
>UNIPROTKB|O77391 [details] [associations]
symbol:PFC0715c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
PROSITE:PS51203 EMBL:AL844502 PIR:T18508 RefSeq:XP_001351234.1
ProteinModelPortal:O77391 EnsemblProtists:PFC0715c:mRNA
GeneID:814478 KEGG:pfa:PFC0715c EuPathDB:PlasmoDB:PF3D7_0316400
HOGENOM:HOG000283219 ProtClustDB:CLSZ2500478 Uniprot:O77391
Length = 1008
Score = 117 (46.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 79/319 (24%), Positives = 134/319 (42%)
Query: 462 SKKRDKTLLN--FNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQ 519
+KKR+K +N F + + + +IDK KS S + + ++ + I +
Sbjct: 140 NKKRNKKRVNHVFMDKNLGDIFESNKTEGIIDKNKS---SNVINNDSEYNHPNIHNNEGT 196
Query: 520 IKNIAAEN-VRKYLRTHSKDSN---ASDEDEESFNDKLVSIEREVEESVGKDIEESLKNV 575
NI N + + + H DSN A + EE K I E+ K I E +K+
Sbjct: 197 YNNIDENNPMYEGMPNHLSDSNLESAMKKAEEYIKGKEDDIIERREKEKKKKIVEKMKDD 256
Query: 576 SDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHT 635
DV F +K+ +L + + +K + + S +L N N+ ++ S + ++++I
Sbjct: 257 EDV-FTDKLLDLRIYDM--LKYVYRNNIYRTSHELVN-NICMWMKSTYSNYVDTNKEIQR 312
Query: 636 STPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKP------ENIS 689
+++ K E K K KEEL + + ++ I Y R V E+I
Sbjct: 313 REKKKQEEEKKDEEEKN-KKKEELINISDNEKDTKHNETNINYKRVNVNDKDVNIHEDII 371
Query: 690 NGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQ-SHLNKPKLFADFPTTSQGNNPDTH 748
G + KTDDE ++I K I + Y R +LN F+ F ++ N +
Sbjct: 372 KGKKAKEKTDDEIQSEIIEKDIST----NYSKDRNVQYLNT---FS-FDKNNEKLNSEM- 422
Query: 749 EPPNSSNKRGKSYSFFENY 767
E NK+ S FF Y
Sbjct: 423 ESLKLYNKKNLSKYFFSLY 441
Score = 63 (27.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 836 ENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESG 895
+NN L DP T+ G N + E+I+ K+ D D + SA ++ES
Sbjct: 666 QNNMITLGDPSNSTK--GVDNYTN---KEMIN--KLSD-DKKDALKKNSAE----VEESS 713
Query: 896 DPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIICD 955
NN + K+ + +S +++ N D + V+ + + + V++ N+ + I
Sbjct: 714 SKNN-VTKNVLLNNSQNVSIANLK-DEQIVKNVENVKNVENVKNVENVKNVENVEMIKSS 771
Query: 956 KCSQPID 962
C++ +D
Sbjct: 772 PCNEVVD 778
>FB|FBgn0031452 [details] [associations]
symbol:Cwc25 "Cwc25" species:7227 "Drosophila melanogaster"
[GO:0007052 "mitotic spindle organization" evidence=IMP]
GO:GO:0007052 EMBL:AE014134 InterPro:IPR019339 Pfam:PF10197
SMART:SM01083 InterPro:IPR022209 Pfam:PF12542 eggNOG:NOG296370
CTD:54883 GeneTree:ENSGT00440000039055 EMBL:BT031272
RefSeq:NP_608705.1 UniGene:Dm.18387 IntAct:Q9VQF5 MINT:MINT-760834
STRING:Q9VQF5 EnsemblMetazoa:FBtr0077712 GeneID:33460
KEGG:dme:Dmel_CG2843 UCSC:CG2843-RA FlyBase:FBgn0031452
InParanoid:Q9VQF5 OMA:HKERSNY OrthoDB:EOG4KKWK4 GenomeRNAi:33460
NextBio:783683 Uniprot:Q9VQF5
Length = 521
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 71/303 (23%), Positives = 127/303 (41%)
Query: 482 LNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSK-DSN 540
+NR E L K E+ L + + ++ +G + + I ++ + V +RT+ SN
Sbjct: 86 INREEYLLGRKIDKSFET-LQAEESRQEQNTVG-LKQTINHVEHDCVPFSIRTYRNVQSN 143
Query: 541 AS-DEDEESFNDKLVSIEREVEESVGKDIEE--SLKNVSDVLFNEKVENLTMENKKSIKN 597
D ++ D L+ I++ ES K +E LK + +L E+ + KK+ KN
Sbjct: 144 EQVDIQRKTLEDPLMLIKQREMESRRKLLENPVKLKEIHRILKTEQEQKAAEGKKKNKKN 203
Query: 598 ECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKE 657
+ S KSK E+ S SD D+ RK ++ V +K +
Sbjct: 204 K----KSKKSKKKKKNRRSSNEESSDSESNDSDDDLD------RKLARQV--SKLKGDQG 251
Query: 658 ELPLVKRVD---NTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSI 714
+L L K +D TI N + T ++ K + + ++SD +D+E+ P+ K S
Sbjct: 252 DLKLDKLLDAKYRTISNQLDMATKKKKSKKSKKKKSSDSSDESSDEEEEPRRKHKRSHSS 311
Query: 715 SMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNS-SNKRGKSYSFFENYLRRKKE 773
R R+S + + Q +P+ + S +R + S + L R++
Sbjct: 312 EDRNQRERRRSRSPRDR------KKRQSRSPEQRQRQRSPEERRERRRSRSRSPLARRQR 365
Query: 774 RER 776
R R
Sbjct: 366 RTR 368
>ZFIN|ZDB-GENE-090313-297 [details] [associations]
symbol:si:dkey-27m7.4 "si:dkey-27m7.4" species:7955
"Danio rerio" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-090313-297 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038
GeneTree:ENSGT00560000076873 EMBL:BX470214 IPI:IPI00495678
Ensembl:ENSDART00000057913 Uniprot:F1Q5R6
Length = 1128
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 109/531 (20%), Positives = 195/531 (36%)
Query: 449 EHSSLPEQSTNHDSKKRDK---TLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCN 505
E + P Q D+ K DK L ++T ++A+ +E K E L+ N
Sbjct: 606 EKETSPVQPVEKDTPKPDKHDLDKLTTEEKTSAKIAV--VEEKS--------EKDLEDNN 655
Query: 506 ANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVG 565
+K V +E + + E+ + D +++D+ ++K E+E E
Sbjct: 656 KQPEKPVEKKETESKEQKSEESTKDSKAAKVIDDVKTEKDDGIKSNKA---EKEKVEEQS 712
Query: 566 KDIEESLK--NVSDVLFNEKVENLTMENKKSI-KNECLSPVSSKSKDLTNENLGHTFETL 622
K E+S NV V E T + ++ I K + + KS N N
Sbjct: 713 KKQEDSKTDGNVETVPIETTKEKETEKKQEDIPKEKSKTEKDDKSDSAGNANTEKDDRAA 772
Query: 623 PSPILTSDRDIHTSTPCRRKGSKNVFENKTLKS---KEELPLVKRVDNT---IPNSFEFI 676
P + +D+ + + K + + KS K EL K + T +P + E
Sbjct: 773 PKETEKTQQDLPKVAEGKSQPEKLQEKQEDSKSDYVKAELAKPKETEKTQEDLPKAAEEK 832
Query: 677 TYTRRQVKPENISNGNNSDNKTD--DEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFA 734
T + EN + + KT + D+ + K + E T+ K +
Sbjct: 833 TQPEKSQTQENSKSDSAGSTKTKKLESDATRETGKTQEDLPKAAEEKTQPE---KSQTQE 889
Query: 735 DFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERL----NSKS--CKDETLT 788
+ + S G+ +++ + GK+ K + E+ N+KS K E +
Sbjct: 890 NSKSDSAGSAKTKKLESDATKETGKTQENLPKVTEEKSQPEKPQKQENNKSDAVKPENIE 949
Query: 789 HGQVHPSVETNT--HTILEEVTSSI-ETVDNGSIETNAMTRIRDDIHLARENNTKFLADP 845
H + + + + LEEV S I + + S++ N + I E K
Sbjct: 950 HPKPTETKDNSKGMEPKLEEVKSEIKDDAKSDSVDINKTETTKPAIPKETEEKRKK---- 1005
Query: 846 IKDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKST 905
+D+ES + + T +E + K D + S S T ++ E D N K
Sbjct: 1006 -EDSESVSAAESVKTSKDEAKTKEKAVDETQSTQSPKTQEPSSEAKPEQKDTNEGKGKMP 1064
Query: 906 VQFHS-NSIN-KGNGNA---DVSPMDTVDIINTIADSSTVDSAINIADPTK 951
+ N++ KG+ + D P D + A + T D + +D K
Sbjct: 1065 EKAEEVNTVTTKGSKDVKGEDTVPKDKAGEVKAPAATKTEDKTVEKSDQVK 1115
>MGI|MGI:1917887 [details] [associations]
symbol:Ankrd26 "ankyrin repeat domain 26" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005813
"centrosome" evidence=ISO] [GO:0005884 "actin filament"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IMP] [GO:0019217 "regulation of fatty acid metabolic
process" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0045599 "negative regulation of fat
cell differentiation" evidence=IMP] [GO:0046621 "negative
regulation of organ growth" evidence=IMP] [GO:0046627 "negative
regulation of insulin receptor signaling pathway" evidence=IMP]
[GO:0060259 "regulation of feeding behavior" evidence=IMP]
[GO:0070373 "negative regulation of ERK1 and ERK2 cascade"
evidence=IMP] InterPro:IPR002110 Pfam:PF00023 PROSITE:PS50088
SMART:SM00248 MGI:MGI:1917887 eggNOG:COG0666 GO:GO:0060259
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0019217 GO:GO:0042593 GO:GO:0070373
GO:GO:0045599 GO:GO:0040015 HOVERGEN:HBG079895 GO:GO:0046621
InterPro:IPR021885 Pfam:PF12001 EMBL:BC047067 EMBL:AK017783
EMBL:AK173096 IPI:IPI00464279 UniGene:Mm.276116
ProteinModelPortal:Q811D2 SMR:Q811D2 STRING:Q811D2
PhosphoSite:Q811D2 PRIDE:Q811D2 HOGENOM:HOG000033957
OrthoDB:EOG4JT04K CleanEx:MM_ANKRD26 Genevestigator:Q811D2
GermOnline:ENSMUSG00000007827 GO:GO:0046627 Uniprot:Q811D2
Length = 1581
Score = 130 (50.8 bits), Expect = 0.00043, P = 0.00043
Identities = 58/254 (22%), Positives = 118/254 (46%)
Query: 455 EQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIG 514
E S +H+ ++K LL+ NQ+ ++A+ R+E +D KSH + K ++ +
Sbjct: 871 EVSVSHE---KEKDLLHKNQRLQDEVAVLRLE---MDTIKSHNQEKEKRYLEDIK--IAN 922
Query: 515 DISEQIKNIAAENV-RKYLRTHSKDSNASDEDEESFNDKLVS-IEREVE-ESVGKDIEES 571
+ ++ ++ + N+ L ++ + D ESF +L S + E ++ +D+E +
Sbjct: 923 EKNDNLQRMVKLNMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIA 982
Query: 572 LKNVSDVLFNEKVE-NLTMENKKSIKNECLSPVSSKSKDLTNE---NLGHTFETLPSPIL 627
+ D F K + N M N + NE LS SK++ N HT + L L
Sbjct: 983 FQRARDEWFRVKDKMNFDMSNLRD-NNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTL 1041
Query: 628 T---SDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVK 684
+ RD+ + T C+ K +++F+++ K + + + ++ + T R+Q+
Sbjct: 1042 ALKHAQRDL-SQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQL- 1099
Query: 685 PENISNGNNSDNKT 698
++ +N S +KT
Sbjct: 1100 -DDAANKAESKDKT 1112
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 129 (50.5 bits), Expect = 0.00049, P = 0.00049
Identities = 70/425 (16%), Positives = 174/425 (40%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSI 595
S S S + + + ++VS EV S + + S S+V + +V + + E S
Sbjct: 229 SSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS----SEVSSSSEVVSSSSEVSSSS 284
Query: 596 KNECLSPVSSKSKDLTNENLGHTFETLPSP-ILTSDRDIHTSTPCRRKGSKNVFENKTLK 654
+ S VSS S+ ++ + + + + S +++S ++ +S+ S+ ++ +
Sbjct: 285 EVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVS 344
Query: 655 SKEELPLVKRVDNTIP-NSFEFITYTRRQVKPENISNGNNSD--NKTDDEDSPQVITKPI 711
S E+ V ++ +S +T + V + + ++S+ + + + S +
Sbjct: 345 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS 404
Query: 712 GSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRK 771
+S ++ + ++ + +S + E +SS++ S +
Sbjct: 405 SEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVS 464
Query: 772 KERERLNSKSCKDET-LTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDD 830
E +S + +T S + + EV SS V + S ++ + +
Sbjct: 465 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 524
Query: 831 IHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDH--SQMTSATKA 888
++ + + I +E S+ +S+ S+EV+ + +VSSS S + + +
Sbjct: 525 SEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSS--EVSSSSEVVSSSSEVSSS 582
Query: 889 DFIKESGD-PNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIA 947
+ S + ++ S+ + S+S + +++VS V + ++ SS V S+ ++
Sbjct: 583 SEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVS 642
Query: 948 DPTKI 952
+++
Sbjct: 643 SSSQV 647
Score = 128 (50.1 bits), Expect = 0.00062, P = 0.00062
Identities = 81/438 (18%), Positives = 198/438 (45%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEES--VGKDIEESLKNVSDVLFNEKVENLTMENKK 593
S ++ +S + S + ++VS +V S V E + + S+V + +V + + E
Sbjct: 165 SSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSS 224
Query: 594 SIKNECLSPVSSKSK-DLTNENLGHTFE--TLPSPILTSDRDIHTSTPCRRKGSKNVFEN 650
S + S VSS S+ ++E + + E + S +++S ++ +S+ S+ V +
Sbjct: 225 SSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSE-VSSS 283
Query: 651 KTLKSKEELPLVKRVDNT--IPNSFEFITYTRR-QVKPENISNGNNSDNKTDDEDSPQVI 707
+ S E+ V ++ + +S + I+ + E +S+ + + ++ S +V+
Sbjct: 284 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVV 343
Query: 708 TKPIGSISMRKYETTRQ-SHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFEN 766
+ S + ++ + S ++ ++ ++S + + E +SS++ S +
Sbjct: 344 SSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSS 403
Query: 767 YLRRKKERERLNSK--SCKDETLTHGQVHPS--VETNTHTILE--EVTSSIETVDNGSIE 820
E +S S E + +V S V +++ + EV+SS E V + S E
Sbjct: 404 SSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSS-E 462
Query: 821 TNAMTRIRDDIHLARENNTKFLADPIKDTE--STGPSNVISTESNEVIDQTKIRDVSSSD 878
++ + + ++ + ++ + + S+ S V+S+ S+EV +++ SSS+
Sbjct: 463 VSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSS-SSEVSSSSEVVS-SSSE 520
Query: 879 HSQMTSATKADFIKESGD--PNNEMCKSTVQFHSNSINKGNGNADVSPM-DTVDIINTIA 935
S + + + + S ++E+ S+ + S+S + +++VS + V + ++
Sbjct: 521 VSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVS 580
Query: 936 DSSTVDSAINIADPTKII 953
SS V S+ ++ +++I
Sbjct: 581 SSSEVSSSSEVSSSSQVI 598
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 129 (50.5 bits), Expect = 0.00049, P = 0.00049
Identities = 70/425 (16%), Positives = 174/425 (40%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSI 595
S S S + + + ++VS EV S + + S S+V + +V + + E S
Sbjct: 229 SSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS----SEVSSSSEVVSSSSEVSSSS 284
Query: 596 KNECLSPVSSKSKDLTNENLGHTFETLPSP-ILTSDRDIHTSTPCRRKGSKNVFENKTLK 654
+ S VSS S+ ++ + + + + S +++S ++ +S+ S+ ++ +
Sbjct: 285 EVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVS 344
Query: 655 SKEELPLVKRVDNTIP-NSFEFITYTRRQVKPENISNGNNSD--NKTDDEDSPQVITKPI 711
S E+ V ++ +S +T + V + + ++S+ + + + S +
Sbjct: 345 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS 404
Query: 712 GSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRK 771
+S ++ + ++ + +S + E +SS++ S +
Sbjct: 405 SEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVS 464
Query: 772 KERERLNSKSCKDET-LTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDD 830
E +S + +T S + + EV SS V + S ++ + +
Sbjct: 465 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 524
Query: 831 IHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSSSDH--SQMTSATKA 888
++ + + I +E S+ +S+ S+EV+ + +VSSS S + + +
Sbjct: 525 SEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSS--EVSSSSEVVSSSSEVSSS 582
Query: 889 DFIKESGD-PNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIA 947
+ S + ++ S+ + S+S + +++VS V + ++ SS V S+ ++
Sbjct: 583 SEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVS 642
Query: 948 DPTKI 952
+++
Sbjct: 643 SSSQV 647
Score = 128 (50.1 bits), Expect = 0.00062, P = 0.00062
Identities = 81/438 (18%), Positives = 198/438 (45%)
Query: 536 SKDSNASDEDEESFNDKLVSIEREVEES--VGKDIEESLKNVSDVLFNEKVENLTMENKK 593
S ++ +S + S + ++VS +V S V E + + S+V + +V + + E
Sbjct: 165 SSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSS 224
Query: 594 SIKNECLSPVSSKSK-DLTNENLGHTFE--TLPSPILTSDRDIHTSTPCRRKGSKNVFEN 650
S + S VSS S+ ++E + + E + S +++S ++ +S+ S+ V +
Sbjct: 225 SSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSE-VSSS 283
Query: 651 KTLKSKEELPLVKRVDNT--IPNSFEFITYTRR-QVKPENISNGNNSDNKTDDEDSPQVI 707
+ S E+ V ++ + +S + I+ + E +S+ + + ++ S +V+
Sbjct: 284 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVV 343
Query: 708 TKPIGSISMRKYETTRQ-SHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFEN 766
+ S + ++ + S ++ ++ ++S + + E +SS++ S +
Sbjct: 344 SSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSS 403
Query: 767 YLRRKKERERLNSK--SCKDETLTHGQVHPS--VETNTHTILE--EVTSSIETVDNGSIE 820
E +S S E + +V S V +++ + EV+SS E V + S E
Sbjct: 404 SSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSS-E 462
Query: 821 TNAMTRIRDDIHLARENNTKFLADPIKDTE--STGPSNVISTESNEVIDQTKIRDVSSSD 878
++ + + ++ + ++ + + S+ S V+S+ S+EV +++ SSS+
Sbjct: 463 VSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSS-SSEVSSSSEVVS-SSSE 520
Query: 879 HSQMTSATKADFIKESGD--PNNEMCKSTVQFHSNSINKGNGNADVSPM-DTVDIINTIA 935
S + + + + S ++E+ S+ + S+S + +++VS + V + ++
Sbjct: 521 VSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVS 580
Query: 936 DSSTVDSAINIADPTKII 953
SS V S+ ++ +++I
Sbjct: 581 SSSEVSSSSEVSSSSQVI 598
>GENEDB_PFALCIPARUM|PF10_0213 [details] [associations]
symbol:PF10_0213 "10b antigen, putative"
species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR006626 SMART:SM00710 EMBL:AE014185 InterPro:IPR019385
Pfam:PF10258 OMA:NNMNHPN RefSeq:XP_001347497.1 HSSP:Q53591
ProteinModelPortal:Q8IJI4 IntAct:Q8IJI4 MINT:MINT-1671833
PRIDE:Q8IJI4 EnsemblProtists:PF10_0213:mRNA GeneID:810370
KEGG:pfa:PF10_0213 EuPathDB:PlasmoDB:PF3D7_1021900
ProtClustDB:CLSZ2514700 Uniprot:Q8IJI4
Length = 2290
Score = 131 (51.2 bits), Expect = 0.00051, P = 0.00051
Identities = 115/580 (19%), Positives = 228/580 (39%)
Query: 429 SHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIER- 487
+HP+ +HP M ++ + NH + L+N+ +N +
Sbjct: 875 NHPNNMNHPNNMNHPNNMNHPNNMNHLNNMNHPNNINQPNLINYQYPMNHVQHINHPDNR 934
Query: 488 -KLID-KFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAEN-VRKYLRT---HSKDSN- 540
K+ + ++ + + D +I + E+ K I E V + L+ H+K +N
Sbjct: 935 NKMNNPNIPNYPNVNVSAPETKQDTKIIPN-KEKKKIINNEGTVLQPLKNNVEHNKANNL 993
Query: 541 -ASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNEC 599
S + + N+K S + V++ E +K++ NE+ EN+ K+ N+
Sbjct: 994 LTSKKHNTNVNNKKKS--KNVQQ------ETPIKHLP----NEE-ENMKQGKTKNSNNKN 1040
Query: 600 LSPVSSKSKDLTNENLGHTFETLP-----SPILTSDRDIHTSTPCRRKGSKNVFENKTLK 654
+ ++K+K+ N N + E++ S ++++ + +KG N + KT +
Sbjct: 1041 NNNKNNKNKNNNNNNNNNNLESITKNKNNSQYISTNVENENLNKNEQKGKMNKMKTKTQR 1100
Query: 655 -SKEELPLVKR-VDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIG 712
+KEE +N S + + Q K N+ N N+ N D + T +
Sbjct: 1101 FNKEEQNETNNFTNNNKKGSNRYQQNKKGQFKNSNM-NYNSWINNQQGNDQQHLNTN-VD 1158
Query: 713 SISMRKYETTRQSHLNKPKLFADFPTTSQGNNP--DTHEPPNSSNKRGKSYSFFENYLRR 770
+ +E + H F D+ + GN D +SSN +++ +N +
Sbjct: 1159 KDKNKDFEVNHEIHK-----FIDYCLKNYGNRNIMDVLNEFSSSNGMNENFDELKNIFQI 1213
Query: 771 KKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSI-ETVDNGSIETNAMTR--I 827
+ E N+ + + + H E N + +E+ I E + IE + +
Sbjct: 1214 QLNEENFNALAALENEAQTNKFHFINEKNMNETIEKGIEEIFEDTNKDIIEEYDKFKKML 1273
Query: 828 RDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSS-SDHSQMTSAT 886
+ + + + I D + + IS ++ E+ D KI D +D+ ++
Sbjct: 1274 SESMDESSMRKIQIENKEISDNKEISDNKEIS-DNKEISDNKKISDNKEINDNKEINDNE 1332
Query: 887 KADFIKESGD--PNNEMC---KSTVQFHSNSINKGNG--NADVSP-MDTVDIINTIADSS 938
K + K+ D NNE K V+ ++ ++ + N N + P + DI + S+
Sbjct: 1333 KINDNKKINDNKDNNEKIEEKKELVENNTKNMFEENNKINITIPPGLSLPDINRALLHSA 1392
Query: 939 TVDSAINIADPTKIICDKC-SQPIDINELQE--HQDYHFA 975
+D NI + KC + DIN L + H+A
Sbjct: 1393 YLD---NIT-----VVKKCLEKKADINYLDKIGRSALHYA 1424
>UNIPROTKB|Q8IJI4 [details] [associations]
symbol:PF10_0213 "10b antigen, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002110
PROSITE:PS50088 SMART:SM00248 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR006626
SMART:SM00710 EMBL:AE014185 InterPro:IPR019385 Pfam:PF10258
OMA:NNMNHPN RefSeq:XP_001347497.1 HSSP:Q53591
ProteinModelPortal:Q8IJI4 IntAct:Q8IJI4 MINT:MINT-1671833
PRIDE:Q8IJI4 EnsemblProtists:PF10_0213:mRNA GeneID:810370
KEGG:pfa:PF10_0213 EuPathDB:PlasmoDB:PF3D7_1021900
ProtClustDB:CLSZ2514700 Uniprot:Q8IJI4
Length = 2290
Score = 131 (51.2 bits), Expect = 0.00051, P = 0.00051
Identities = 115/580 (19%), Positives = 228/580 (39%)
Query: 429 SHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIER- 487
+HP+ +HP M ++ + NH + L+N+ +N +
Sbjct: 875 NHPNNMNHPNNMNHPNNMNHPNNMNHLNNMNHPNNINQPNLINYQYPMNHVQHINHPDNR 934
Query: 488 -KLID-KFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAEN-VRKYLRT---HSKDSN- 540
K+ + ++ + + D +I + E+ K I E V + L+ H+K +N
Sbjct: 935 NKMNNPNIPNYPNVNVSAPETKQDTKIIPN-KEKKKIINNEGTVLQPLKNNVEHNKANNL 993
Query: 541 -ASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNEC 599
S + + N+K S + V++ E +K++ NE+ EN+ K+ N+
Sbjct: 994 LTSKKHNTNVNNKKKS--KNVQQ------ETPIKHLP----NEE-ENMKQGKTKNSNNKN 1040
Query: 600 LSPVSSKSKDLTNENLGHTFETLP-----SPILTSDRDIHTSTPCRRKGSKNVFENKTLK 654
+ ++K+K+ N N + E++ S ++++ + +KG N + KT +
Sbjct: 1041 NNNKNNKNKNNNNNNNNNNLESITKNKNNSQYISTNVENENLNKNEQKGKMNKMKTKTQR 1100
Query: 655 -SKEELPLVKR-VDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIG 712
+KEE +N S + + Q K N+ N N+ N D + T +
Sbjct: 1101 FNKEEQNETNNFTNNNKKGSNRYQQNKKGQFKNSNM-NYNSWINNQQGNDQQHLNTN-VD 1158
Query: 713 SISMRKYETTRQSHLNKPKLFADFPTTSQGNNP--DTHEPPNSSNKRGKSYSFFENYLRR 770
+ +E + H F D+ + GN D +SSN +++ +N +
Sbjct: 1159 KDKNKDFEVNHEIHK-----FIDYCLKNYGNRNIMDVLNEFSSSNGMNENFDELKNIFQI 1213
Query: 771 KKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSI-ETVDNGSIETNAMTR--I 827
+ E N+ + + + H E N + +E+ I E + IE + +
Sbjct: 1214 QLNEENFNALAALENEAQTNKFHFINEKNMNETIEKGIEEIFEDTNKDIIEEYDKFKKML 1273
Query: 828 RDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEVIDQTKIRDVSS-SDHSQMTSAT 886
+ + + + I D + + IS ++ E+ D KI D +D+ ++
Sbjct: 1274 SESMDESSMRKIQIENKEISDNKEISDNKEIS-DNKEISDNKKISDNKEINDNKEINDNE 1332
Query: 887 KADFIKESGD--PNNEMC---KSTVQFHSNSINKGNG--NADVSP-MDTVDIINTIADSS 938
K + K+ D NNE K V+ ++ ++ + N N + P + DI + S+
Sbjct: 1333 KINDNKKINDNKDNNEKIEEKKELVENNTKNMFEENNKINITIPPGLSLPDINRALLHSA 1392
Query: 939 TVDSAINIADPTKIICDKC-SQPIDINELQE--HQDYHFA 975
+D NI + KC + DIN L + H+A
Sbjct: 1393 YLD---NIT-----VVKKCLEKKADINYLDKIGRSALHYA 1424
>GENEDB_PFALCIPARUM|PF11_0388 [details] [associations]
symbol:PF11_0388 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014186 RefSeq:XP_001348058.2
EnsemblProtists:PF11_0388:mRNA GeneID:810934 KEGG:pfa:PF11_0388
EuPathDB:PlasmoDB:PF3D7_1137600 Uniprot:Q8IHY8
Length = 656
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 104/536 (19%), Positives = 224/536 (41%)
Query: 438 KPQDHPEPMTS--EHSSLPEQSTNHDSKKRD--KTLLNF-NQQTPFQLALNRIERKLIDK 492
K +D +PM++ E + + +D + + K L+ F N + +N K I+
Sbjct: 3 KGKDKNDPMSTRIEKKIILDMLKENDCQTIEELKNLVLFLNNENKRLHTMNMDSLKKINI 62
Query: 493 FKSHIESKLDSCNANVDKLVIGD--ISEQIKNIAAENV--RKYLRTHSKDSNAS-DEDEE 547
++S L+ + D+ ++K + ++V + Y + N +E ++
Sbjct: 63 LSVRVKS-LEKISKKYDQFYASKKKYKNKLKELERKSVTLKNYTMDKENEYNKMCEEHDK 121
Query: 548 SFNDKLVSIEREVEESVGKDIEESLKN-VSDVLF---NEKVENLTMENKKSIKNECLSP- 602
F + ++ R++E + + E + + VS+ ++ N+ +N++ N +I N+ +S
Sbjct: 122 YFKNLFKNLNRKIEYTFACEKENTYDDSVSNSIYTNSNQNEDNISYNNN-NINNDNISSS 180
Query: 603 -VSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPL 661
+S S + N + T I D++++ KN++++K L + +
Sbjct: 181 SISKNSNNTKNSSFNETKNINDDKIKYDDKNVYDDKNIN--DDKNIYDDKYLYDDKNINH 238
Query: 662 VK-RVDNTIPNSFEFITYTRRQVKPENISNGNN-SDNKTDDED--SPQVITK-PIGSISM 716
K D+ N +++ + NI NN ++N T+ SP K + +I++
Sbjct: 239 DKYSYDDKNINDDKYLYDDKNLYDGNNIYEENNYNNNNTNGHQMKSPTYHMKNSVQNITI 298
Query: 717 RKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERER 776
Y + ++ ++K + T+ N ++ N N + + N K E
Sbjct: 299 --YTSINKNDISKDINKINEKNTANINTSHIYQIKNDENNN----NIYNNVEHIKSLCE- 351
Query: 777 LNSKSCKDETLTHGQVHPSVETNTHT--ILEEV-TSSIETVDNGSIETNAMTR-IRDDIH 832
+ K+ ++ L + + H + + H I TS +E +N + N M I+++I
Sbjct: 352 -SYKNYDNDHLLYYKKHSHSKEDIHNYPIFNNAKTSQLENSNNDFL--NIMNNNIKNNIS 408
Query: 833 LARENNTKFLADPIKDTESTGPSNVISTE-SNEVIDQT-KIRDVSSSDHSQMTSATKADF 890
E++ K K + +N I + SN I+ T KI + ++ + Q T K
Sbjct: 409 -EMESSKK------KKKSNLLITNEIEDKLSNIQINHTNKINENNTIQYGQKTKGNKIGN 461
Query: 891 IKES-GDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAIN 945
K + + N++ ++ + +N I N D++ MD + N + D D+ N
Sbjct: 462 HKTNIKEKLNDLIEN-IHLKNNKIENMNNMDDMNDMDNM---NNMDDMDNTDNMNN 513
>UNIPROTKB|Q8IHY8 [details] [associations]
symbol:PF11_0388 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014186 RefSeq:XP_001348058.2
EnsemblProtists:PF11_0388:mRNA GeneID:810934 KEGG:pfa:PF11_0388
EuPathDB:PlasmoDB:PF3D7_1137600 Uniprot:Q8IHY8
Length = 656
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 104/536 (19%), Positives = 224/536 (41%)
Query: 438 KPQDHPEPMTS--EHSSLPEQSTNHDSKKRD--KTLLNF-NQQTPFQLALNRIERKLIDK 492
K +D +PM++ E + + +D + + K L+ F N + +N K I+
Sbjct: 3 KGKDKNDPMSTRIEKKIILDMLKENDCQTIEELKNLVLFLNNENKRLHTMNMDSLKKINI 62
Query: 493 FKSHIESKLDSCNANVDKLVIGD--ISEQIKNIAAENV--RKYLRTHSKDSNAS-DEDEE 547
++S L+ + D+ ++K + ++V + Y + N +E ++
Sbjct: 63 LSVRVKS-LEKISKKYDQFYASKKKYKNKLKELERKSVTLKNYTMDKENEYNKMCEEHDK 121
Query: 548 SFNDKLVSIEREVEESVGKDIEESLKN-VSDVLF---NEKVENLTMENKKSIKNECLSP- 602
F + ++ R++E + + E + + VS+ ++ N+ +N++ N +I N+ +S
Sbjct: 122 YFKNLFKNLNRKIEYTFACEKENTYDDSVSNSIYTNSNQNEDNISYNNN-NINNDNISSS 180
Query: 603 -VSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPL 661
+S S + N + T I D++++ KN++++K L + +
Sbjct: 181 SISKNSNNTKNSSFNETKNINDDKIKYDDKNVYDDKNIN--DDKNIYDDKYLYDDKNINH 238
Query: 662 VK-RVDNTIPNSFEFITYTRRQVKPENISNGNN-SDNKTDDED--SPQVITK-PIGSISM 716
K D+ N +++ + NI NN ++N T+ SP K + +I++
Sbjct: 239 DKYSYDDKNINDDKYLYDDKNLYDGNNIYEENNYNNNNTNGHQMKSPTYHMKNSVQNITI 298
Query: 717 RKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERER 776
Y + ++ ++K + T+ N ++ N N + + N K E
Sbjct: 299 --YTSINKNDISKDINKINEKNTANINTSHIYQIKNDENNN----NIYNNVEHIKSLCE- 351
Query: 777 LNSKSCKDETLTHGQVHPSVETNTHT--ILEEV-TSSIETVDNGSIETNAMTR-IRDDIH 832
+ K+ ++ L + + H + + H I TS +E +N + N M I+++I
Sbjct: 352 -SYKNYDNDHLLYYKKHSHSKEDIHNYPIFNNAKTSQLENSNNDFL--NIMNNNIKNNIS 408
Query: 833 LARENNTKFLADPIKDTESTGPSNVISTE-SNEVIDQT-KIRDVSSSDHSQMTSATKADF 890
E++ K K + +N I + SN I+ T KI + ++ + Q T K
Sbjct: 409 -EMESSKK------KKKSNLLITNEIEDKLSNIQINHTNKINENNTIQYGQKTKGNKIGN 461
Query: 891 IKES-GDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAIN 945
K + + N++ ++ + +N I N D++ MD + N + D D+ N
Sbjct: 462 HKTNIKEKLNDLIEN-IHLKNNKIENMNNMDDMNDMDNM---NNMDDMDNTDNMNN 513
>DICTYBASE|DDB_G0290503 [details] [associations]
symbol:DDB_G0290503 species:44689 "Dictyostelium
discoideum" [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
dictyBase:DDB_G0290503 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 eggNOG:NOG12793 EMBL:AAFI02000164
RefSeq:XP_635612.1 HSSP:P11978 ProteinModelPortal:Q54G05
PRIDE:Q54G05 EnsemblProtists:DDB0188916 GeneID:8627684
KEGG:ddi:DDB_G0290503 OMA:FNSKKQQ Uniprot:Q54G05
Length = 1492
Score = 129 (50.5 bits), Expect = 0.00052, P = 0.00052
Identities = 109/545 (20%), Positives = 221/545 (40%)
Query: 438 KPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHI 497
K Q+ E + S SS+ E+ D + +D LN Q +L N D+ +S +
Sbjct: 557 KLQEKDEKLKSLESSIIERDEKID-QLQDN--LNEKQDKINELVENNESSS--DELQSKL 611
Query: 498 ESKLDSCNANVDKLVIGD-ISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSI 556
D +KL+ I ++++ EN K + ++SDE N KL+ +
Sbjct: 612 IQLSDQLQEKDEKLLNNQSIINELQSNLNENQNKINELIENNQSSSDE----LNSKLIKL 667
Query: 557 EREVEESVGKDIEESLKNV-SDVLFNE-KVENLTMENKKSIKNECLSPVSSKSKDLTN-- 612
E+ KD E+++++ + ++ N+ K++ L N+ ++ NE S ++ K ++
Sbjct: 668 SDEL-----KDKNENVRSLETSIIENQDKLDQLIQSNQVTV-NELQSKLNEKEININQLI 721
Query: 613 ENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNS 672
EN + + L S + +I+ + S + K +E L +++ I N+
Sbjct: 722 ENNQSSLDELQSKLNEKQNEINQLIENNQSSSDELQSKLNEKHQEISELQSKLNELIENN 781
Query: 673 FEFITYTRRQVKPENISNG-NNSDNKTDDEDSPQVITKPIGSISMRKYETTR----QSHL 727
+ Q K +S+ D K DS +I + + K QS L
Sbjct: 782 ES--SSDELQSKLIQLSDELKEKDEKLKSLDSI-IIENQEKLVQLTKSNQDSLDELQSKL 838
Query: 728 NKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFF-ENYLRRKKE-RERLNSKSCKDE 785
N+ + + + N ++E + N++ + EN E + +LN K
Sbjct: 839 NEKQ--NEINELIENNQSSSNELQSKLNEKQNEINLLIENNQSSSDELQSKLNEK----- 891
Query: 786 TLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNA-MTRIRDDIHLARENNTKFLAD 844
H +++ +++ + ++ +E ++ S E + + ++ D + +EN K
Sbjct: 892 ---HQEIN-ELQSKLNEKQNKINELVENNESSSDELQSKLIQLSDQLQ-EKENQLKSFES 946
Query: 845 PI--KDTESTGPSNVISTESNEVIDQTKIRDVSSSDHSQMTSATKADFIK---ESGDPNN 899
I +D + + ++ + NE IDQ + SS D Q K + I E+ +
Sbjct: 947 SIIERDEKLNQLQSKLNEKQNE-IDQITENNQSSLDELQSNLNEKQNEINQLIENNQSSL 1005
Query: 900 EMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAINIADPTKIICDKCSQ 959
+ +S + N IN+ + + + T + ++ S + + + I D SQ
Sbjct: 1006 DELQSKLNEKLNEINEKDNKIN-ELIQTNESLSKDQQSKFENLEQELEEKNNKILDLNSQ 1064
Query: 960 PIDIN 964
ID+N
Sbjct: 1065 IIDVN 1069
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 69/322 (21%), Positives = 137/322 (42%)
Query: 429 SHPSIQQFFKPQDHPEPMTSEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQL--ALNRIE 486
S S Q+ K ++ E E SS E+S + +++ ++K + ++T + A ++E
Sbjct: 420 SEVSSQEESKGKES-ETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVE 478
Query: 487 RKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDE 546
+K + K++S K + E+ ++ + E + T +KD+ S E
Sbjct: 479 SSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEK-ETETKDNEESSSQE 537
Query: 547 ESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSK 606
E+ + + IE+E S EES +N ++ EK E+ + E K +NE + S
Sbjct: 538 ETKDKENEKIEKEEASSQ----EESKENETET--KEKEESSSQEETKEKENEKIEKEESA 591
Query: 607 SKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVF-ENKTLKSKEELPLVKRV 665
++ T E E S ++ T T + + S N EN +S+++ ++V
Sbjct: 592 PQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKK----EQV 647
Query: 666 DNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQS 725
+ + E T K ++S+ ++ K +E S + + G + + ++ S
Sbjct: 648 EENEKKTDED---TSESSKENSVSD---TEQKQSEETSEKEESNKNGETEVTQEQSDSSS 701
Query: 726 HLNKPKLFADFPTTSQGNNPDT 747
N P+ D T + PD+
Sbjct: 702 DTNLPQEVKDVRTDLE-TLPDS 722
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 82/391 (20%), Positives = 158/391 (40%)
Query: 451 SSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNAN--- 507
S LP + N +S +K+ + + L + E + ++K +E + + N
Sbjct: 346 SVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEK-NELLEKEFNDSNGESSV 404
Query: 508 VDKLV-IGDI-SEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREV----E 561
K GD S++ ++++ K + +KD S EES + + + E+E E
Sbjct: 405 TGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQE 464
Query: 562 ESVGKD------IEESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENL 615
E++ K+ +E S + ++ EK+E+ +E K ++E S S++ T E
Sbjct: 465 ETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKE 524
Query: 616 GHTF--ETLPSPILTSDRDIHTSTPCRRKGSKNVFENKT-LKSKEELPLVKRVDNTIPNS 672
T E S T D++ + EN+T K KEE + T
Sbjct: 525 TETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEES---SSQEETKEKE 581
Query: 673 FEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKL 732
E I + + P+ + ++ +E + Q TK + + K E++
Sbjct: 582 NEKIE--KEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNT 639
Query: 733 FADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQV 792
++ + N T E + S+K + E+E N K+ + E +T Q
Sbjct: 640 ESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESN-KNGETE-VTQEQS 697
Query: 793 HPSVETNTHTILEEVTSSIETV-DNGSIETN 822
S +TN +++V + +ET+ D+G+ +N
Sbjct: 698 DSSSDTNLPQEVKDVRTDLETLPDSGNGGSN 728
>SGD|S000000211 [details] [associations]
symbol:DSF2 "Deletion suppressor of mpt5 mutation"
species:4932 "Saccharomyces cerevisiae" [GO:0005934 "cellular bud
tip" evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR011990
SGD:S000000211 EMBL:BK006936 Gene3D:1.25.40.10 InterPro:IPR006597
Pfam:PF08238 SMART:SM00671 EMBL:Z35876 PIR:S45859
RefSeq:NP_009561.2 ProteinModelPortal:P38213 SMR:P38213
IntAct:P38213 MINT:MINT-658840 STRING:P38213 PaxDb:P38213
EnsemblFungi:YBR007C GeneID:852292 KEGG:sce:YBR007C CYGD:YBR007c
eggNOG:NOG40183 HOGENOM:HOG000112284 OMA:PALYECG OrthoDB:EOG4GF6QP
NextBio:970940 Genevestigator:P38213 GermOnline:YBR007C
Uniprot:P38213
Length = 736
Score = 125 (49.1 bits), Expect = 0.00060, P = 0.00060
Identities = 77/352 (21%), Positives = 136/352 (38%)
Query: 529 RKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVG-KDIE--ESLKNVSDVLFNEKV- 584
RK + S + ES D S + S+ + I+ E L + D+ +++
Sbjct: 21 RKANSSEVSQSPPPNNSFESSMDSQFSYAHSNKSSISFESIQTTERLLDKLDLSLEDELI 80
Query: 585 -ENLTMENKKSIKNECLSPVSSKSKDL-TNENLGHTFETLPSP--ILTSDRDIHTSTPCR 640
+ +E + + +N LS S + + +E + T PSP I DR + +
Sbjct: 81 LQEALLEEENASRNSQLSQTSGPTLCMPASEFPSLRYRTNPSPTYIQARDRSLIIDN-LK 139
Query: 641 RKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTDD 700
K S + + K + LP+ R + ++ T++ +KP+ N N D K +
Sbjct: 140 EKDSTLRGKYSSGKVERHLPVKSRYSYIVEEDYDSETFSG--MKPQ--MNRNEKDYKYPN 195
Query: 701 EDSPQVITKPIGSISMRKY--ETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRG 758
++ T + KY E TR HL +PT NN NS N R
Sbjct: 196 LENGNRSTNSPNPFNFEKYRIENTRLHHL--------YPTLISDNNTSVDNNANSKNNRT 247
Query: 759 KSYSFFENYLRRKKERERLNSK-SCKDE-TLTHGQ---VHPSVETNTHTILEEVTSSIET 813
S N + + +R++ K SC +E T T T+T+T EV +
Sbjct: 248 TS-----NNINTSTKTDRISEKQSCPNEFTTTQKSNCLYRNGSSTSTNTSFSEVGQLSKP 302
Query: 814 VDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVISTESNEV 865
S E+ + + + + L + + T P + ST +T +N++
Sbjct: 303 KTQSSFESESSSFSK--LKLTKSDTTPIKPSPKRSNSSTSTITKTNTMTNDI 352
>GENEDB_PFALCIPARUM|PFL0745c [details] [associations]
symbol:PFL0745c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014188 RefSeq:XP_001350558.1
ProteinModelPortal:Q8I5Q2 PRIDE:Q8I5Q2
EnsemblProtists:PFL0745c:mRNA GeneID:811202 KEGG:pfa:PFL0745c
EuPathDB:PlasmoDB:PF3D7_1215400 HOGENOM:HOG000136620
ProtClustDB:CLSZ2500957 Uniprot:Q8I5Q2
Length = 616
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 74/370 (20%), Positives = 151/370 (40%)
Query: 516 ISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNV 575
++E + N++ +T S ++ + + + +D ++ E ++ +S G+ ++ LK +
Sbjct: 236 LNENVNEFVEGNIQNVEQT-SISNDITSHQQNNIDDSFITGEDKITDS-GEYVD--LKKI 291
Query: 576 SDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHT 635
SD + NE + + + N +I N ++ +KD+ +N + + L + D
Sbjct: 292 SDEINNEHILDY-INNIDNINNN----MNYYNKDICLDNKLNDDKDLMDFLNIKCSDKED 346
Query: 636 STPCRRKGSKNVFENK-TLKSKEELPLVKRVDNTIPNSFEFI-----TYTRRQVKPEN-I 688
+P +++ E K ++ + ++K +DN N+ + TY + N I
Sbjct: 347 DSPM----DESINEPKGEVEQTNKTKILKNIDNVECNNNDAYNNNNNTYNINDINNVNDI 402
Query: 689 SNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTH 748
+N N+ +N D + ++ K +K E +S L+ K P + + PDT
Sbjct: 403 NNVNDINNVNDINNVNDIVKKRFLLFKKKKTEKVNESELDSSK--KKIPQDDEFDYPDTK 460
Query: 749 -----EPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTI 803
PN+S +GK +N K E N+ DE + H + + +N
Sbjct: 461 TNEIINDPNNSYNKGKD----KNVCPAKDTNEYFNNT---DENVLHNGKN-GINSNLRKR 512
Query: 804 LEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKD----TESTGPSNVIS 859
+ T N + + I D +A ++DPI++ TE N
Sbjct: 513 KNNNLNDSSTTFNHILNNSISEFINSDDEVA-----PLISDPIQNNATNTEPKEEQNTTE 567
Query: 860 TESNEVIDQT 869
T+ N+ + T
Sbjct: 568 TKQNDKENNT 577
>UNIPROTKB|Q8I5Q2 [details] [associations]
symbol:PFL0745c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014188 RefSeq:XP_001350558.1
ProteinModelPortal:Q8I5Q2 PRIDE:Q8I5Q2
EnsemblProtists:PFL0745c:mRNA GeneID:811202 KEGG:pfa:PFL0745c
EuPathDB:PlasmoDB:PF3D7_1215400 HOGENOM:HOG000136620
ProtClustDB:CLSZ2500957 Uniprot:Q8I5Q2
Length = 616
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 74/370 (20%), Positives = 151/370 (40%)
Query: 516 ISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNV 575
++E + N++ +T S ++ + + + +D ++ E ++ +S G+ ++ LK +
Sbjct: 236 LNENVNEFVEGNIQNVEQT-SISNDITSHQQNNIDDSFITGEDKITDS-GEYVD--LKKI 291
Query: 576 SDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHT 635
SD + NE + + + N +I N ++ +KD+ +N + + L + D
Sbjct: 292 SDEINNEHILDY-INNIDNINNN----MNYYNKDICLDNKLNDDKDLMDFLNIKCSDKED 346
Query: 636 STPCRRKGSKNVFENK-TLKSKEELPLVKRVDNTIPNSFEFI-----TYTRRQVKPEN-I 688
+P +++ E K ++ + ++K +DN N+ + TY + N I
Sbjct: 347 DSPM----DESINEPKGEVEQTNKTKILKNIDNVECNNNDAYNNNNNTYNINDINNVNDI 402
Query: 689 SNGNNSDNKTDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTH 748
+N N+ +N D + ++ K +K E +S L+ K P + + PDT
Sbjct: 403 NNVNDINNVNDINNVNDIVKKRFLLFKKKKTEKVNESELDSSK--KKIPQDDEFDYPDTK 460
Query: 749 -----EPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTI 803
PN+S +GK +N K E N+ DE + H + + +N
Sbjct: 461 TNEIINDPNNSYNKGKD----KNVCPAKDTNEYFNNT---DENVLHNGKN-GINSNLRKR 512
Query: 804 LEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKD----TESTGPSNVIS 859
+ T N + + I D +A ++DPI++ TE N
Sbjct: 513 KNNNLNDSSTTFNHILNNSISEFINSDDEVA-----PLISDPIQNNATNTEPKEEQNTTE 567
Query: 860 TESNEVIDQT 869
T+ N+ + T
Sbjct: 568 TKQNDKENNT 577
>DICTYBASE|DDB_G0275919 [details] [associations]
symbol:DDB_G0275919 "tRNA/rRNA methyltransferase SpoU
family protein" species:44689 "Dictyostelium discoideum"
[GO:0008173 "RNA methyltransferase activity" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0001510 "RNA methylation" evidence=IEA]
InterPro:IPR001537 Pfam:PF00588 dictyBase:DDB_G0275919
GO:GO:0003723 EMBL:AAFI02000013 GO:GO:0006396 GO:GO:0008173
GO:GO:0001510 eggNOG:COG0566 RefSeq:XP_643609.1
ProteinModelPortal:Q552S2 EnsemblProtists:DDB0217723 GeneID:8620196
KEGG:ddi:DDB_G0275919 InParanoid:Q552S2 Uniprot:Q552S2
Length = 787
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 107/502 (21%), Positives = 201/502 (40%)
Query: 487 RKLIDKFKSHIESKLDSC--NANVDKLV-IGDISEQIKNIAAENVRKYLRTHSKDSNASD 543
R L D + I+ K D+ N N++K I S I+ + E + K +++ N S
Sbjct: 47 RNLRDSSEVIIKPKNDNNDNNNNINKNNDINVNSGDIQRSSGEVITKPKNSNNNVDNESK 106
Query: 544 EDEESFNDKLVSIEREVEE------SVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKN 597
+ ++ VSI+ +E+ +V ++I S K S + K N N + N
Sbjct: 107 KVTKNRTSSEVSIKPRIEKINDNNNNVDREIIYSQKRTSSGVKTIKPINDNSNNNNNNGN 166
Query: 598 ECL--SPVS-SKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLK 654
E + SP S+ K N +T+ S P K S+ + K
Sbjct: 167 EKIDDSPKRYSRLKPSKTINKHENEKTIDSQKRIYGLKTFDKEPI--KSSRMGLGSMLTK 224
Query: 655 SKEELPLVKRVDNTIPNSFEFITYTRRQV-KPENISN-GNNSDNKTDDEDSPQVITKPIG 712
++ + +N P+ +T +V + + N N D K ++ED P T P+
Sbjct: 225 ERKSYKNINLENNDEPSPI--VTLNSEKVFSQKRVRNLKTNEDKKIENEDLP---TPPLK 279
Query: 713 SISMRKY----ETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYL 768
S K +T ++++ K K D T+ NN +++ N++N +Y+ EN
Sbjct: 280 SYQPNKKPTITDTQNRNYILKSKSSIDIDDTNNNNNYNSYNRNNNNNNN--NYNNNENEN 337
Query: 769 RRKKERERLNSKSC-KDETLTHGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRI 827
+ E E N K E + + + H + ++ S + + + ++
Sbjct: 338 ENENENENENENEIEKQENNNNNNYNEEKKNEIH--ISQIRSVLSIFER---RPEDLVKL 392
Query: 828 RDDIHLARENNTKFLADPIKD-TESTGPSNVISTESNEVIDQTKIRDVSSS-DHSQMTSA 885
D ++N + A IK +S+ +++ E +E +T +R VS + H + +
Sbjct: 393 YIDSKFYKDNKLELKA-LIKHFVDSSKTYKILNEEESE---ET-LRKVSGTIHHGGICAV 447
Query: 886 TKADFIKESGDP-NNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAI 944
TK + + + + EM K+ F SNS ++ S I+N I +S + S
Sbjct: 448 TKKKYCMPTKELFDKEMEKAN--FLSNSPFTNKVHSFSSEFSKSKILNQIKFNS-LGSG- 503
Query: 945 NIADPTKIICDKCSQPIDINEL 966
+ P ++ D P +I +
Sbjct: 504 --SKPVVLLLDGIENPQNIGAI 523
>SGD|S000004635 [details] [associations]
symbol:HOF1 "Bud neck-localized, SH3 domain-containing
protein required for cytoki" species:4932 "Saccharomyces
cerevisiae" [GO:0000142 "cellular bud neck contractile ring"
evidence=IDA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] [GO:0008092 "cytoskeletal protein
binding" evidence=IPI] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005935 "cellular bud neck"
evidence=IEA] [GO:0000144 "cellular bud neck septin ring"
evidence=IDA] [GO:0000281 "cytokinesis after mitosis" evidence=IMP]
[GO:0044697 "HICS complex" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IGI;IPI] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001452 PROSITE:PS50002 SMART:SM00326
SGD:S000004635 GO:GO:0007067 GO:GO:0006974 EMBL:BK006946
SUPFAM:SSF50044 GO:GO:0000281 GO:GO:0000142 EMBL:Z49213
GO:GO:0000144 InterPro:IPR001060 Pfam:PF00611 SMART:SM00055
PROSITE:PS50133 GO:GO:0071937 OrthoDB:EOG4N07PQ PIR:S53948
RefSeq:NP_013746.1 ProteinModelPortal:Q05080 SMR:Q05080
DIP:DIP-2729N IntAct:Q05080 MINT:MINT-470371 STRING:Q05080
PaxDb:Q05080 PeptideAtlas:Q05080 EnsemblFungi:YMR032W GeneID:855048
KEGG:sce:YMR032W CYGD:YMR032w eggNOG:NOG303196 HOGENOM:HOG000112128
OMA:FAKSWNS NextBio:978280 Genevestigator:Q05080 GermOnline:YMR032W
Uniprot:Q05080
Length = 669
Score = 124 (48.7 bits), Expect = 0.00067, P = 0.00067
Identities = 94/447 (21%), Positives = 185/447 (41%)
Query: 448 SEHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDSCNAN 507
+E++ + + H+ ++ K N +Q+ QL + + E K KF H ++L SC
Sbjct: 157 NENNMIGAKRVEHNKRELLKWESN-SQEYKVQLDVLKQEYKASQKFWIHEWAQL-SCELQ 214
Query: 508 -VDKLVIGDISEQIKNIAAENVRKYLRTHSK-DSNASDEDEESFNDKLVSIEREVEESVG 565
++ I + +++ A ++ Y+ +K D + + + D++ + +E G
Sbjct: 215 EMENARISFLQSKLQQFATSSMETYILEQTKMDMLTNHLNSFTAADEISTFSKE--NGTG 272
Query: 566 KDIEESLKNVSDVLFN-EKVENLTMENKKSIKN-ECLSPVSSKSKDLTNE----NLGHTF 619
+ ++ K + N ++ +++ +KK+ + + +SS+ K+ N+ ++
Sbjct: 273 RLKHKTSKGDMNSSANWAQMSSISTTSKKTESYMDNIRKLSSQLKETENKRKLASIDKYE 332
Query: 620 ETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEE-LPLVKRVDNTI----PNSFE 674
+ LPSP +T STP R +K V N TL + + L VD+++ P+
Sbjct: 333 KPLPSPEVTMATQFRNSTPVIRNETK-VVANPTLSLRSSPVQLQSNVDDSVLRQKPDKPR 391
Query: 675 FITYTRRQVKPENISNGNNSDNK-TDDEDSPQVITKPIGSISMRKYETTRQSHLNKPKLF 733
I Q+KP+ S N D K Q ++ P S S T SH+ K +
Sbjct: 392 PIV-GEEQLKPDEDSK--NPDEKGLMVHKRNQSLSSPSESSSSNP---TDFSHIKKRQSM 445
Query: 734 ADFPTT--SQGNNPDTHE----PPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETL 787
T+ S N+ D + NSSN++ KS S + + L
Sbjct: 446 ESMTTSVSSMANSIDDSQRFAKSWNSSNRKRKSMSHLQVPSSASSRSDDGGRTPNSAHNL 505
Query: 788 THGQVHPSVETNTHTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIK 847
+ +T+T TIL + ++ G T+ + I D +N + D +
Sbjct: 506 NEDDYNTRRDTSTSTILFKPPVAVRGTSRG--HTHRQSMIMQD-----SSNP--IEDALY 556
Query: 848 DTESTGPSNVISTESNEVIDQTKI-RD 873
+ E S+ T++ ++D+ + RD
Sbjct: 557 EMERIQSSSKPGTKTGNIMDERGVVRD 583
>DICTYBASE|DDB_G0286985 [details] [associations]
symbol:zipA "zipper-like domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0286985 GO:GO:0005615
GenomeReviews:CM000153_GR EMBL:AAFI02000093 RefSeq:XP_637450.1
EnsemblProtists:DDB0191488 GeneID:8625896 KEGG:ddi:DDB_G0286985
InParanoid:Q54L07 OMA:LQSTKDQ Uniprot:Q54L07
Length = 1024
Score = 126 (49.4 bits), Expect = 0.00070, P = 0.00070
Identities = 103/541 (19%), Positives = 231/541 (42%)
Query: 422 SKFSPLGSH-PSIQQFFKPQDHPEPMTSE-HSSLPEQSTNHDSKKRDKTL--LNFNQQTP 477
++ S L S +Q + +D TS+ S+L EQ + DS+ +D+ L + N Q
Sbjct: 468 TELSQLQSEFEKLQNQLQSKDSELLETSKKQSALLEQQSE-DSQSKDEKLKSVELNLQQT 526
Query: 478 FQLALNRIERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIKNIAAENVRKYLRTHSK 537
Q L +++L KS +E + + + KL +++ Q ++V+ L S+
Sbjct: 527 LQ-QLQSKDQEL-QNVKSQLEQQSEDSESKDQKLKSVELTLQQTLQQLQDVKSQLEQQSE 584
Query: 538 DSNASDEDEESFNDKLVS-IEREVEESVGKD-----IEESLKNVSDVLFNEKVENLTMEN 591
+ + DE +S L ++ + E KD +E L +V + L ++ N E
Sbjct: 585 HNESKDEKLKSIELNLQQQLQSKDSELSSKDEQLKCLESELSSVKEQLSSQS-SNTDSE- 642
Query: 592 KKSIKNECLSPVSS-KSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFEN 650
S+K++ LS S KSKD N +++ S L S +D +S + +K+ +
Sbjct: 643 LSSVKDQLLSKDSELKSKDEQLSNKDSQIKSIESD-LQSVKDQLSSKDQELQSTKDQLSS 701
Query: 651 KTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKP--ENISNGNNSDNKTDDEDSP--QV 706
K + + +K +++ + + + ++ ++++ + +S+ + T D+ S Q
Sbjct: 702 KDEQLSNKDTQIKSIESDLQSVKDQLSSKDQELQSTKDQLSSKDQELQSTKDQLSTKDQE 761
Query: 707 ITKPIGSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFEN 766
+ +S + TT Q +L + S ++ S K + S +
Sbjct: 762 LQSAKDQLSCQS-STTDQLSAKDTELQSTKDQLSSKDSELQSIKDQLSTKDSELQSSKDQ 820
Query: 767 YLRRKKERERLNSK-SCKDETLTHGQVH-PSVETNTHTILEEVTSSIETVDNGSIETNAM 824
+ E + + + S KD L + S +++ + ++++S + + + E +
Sbjct: 821 LSSKDSELQSIKDQLSSKDSDLQSVKDQLSSKDSDLQSTKDQLSSKDQELQSVKDELTSK 880
Query: 825 TRIRDDIHLARENNTKFLADPIKDTESTGPSNV-ISTESNEVIDQ--TKIRDVSSS-DHS 880
+ I + ++ +D E+ + ++ E IDQ T+I+D+++ +++
Sbjct: 881 DQELQQITSKQSEQDSKVSQIQQDLENKNAEFLSVTFEKQTEIDQLKTQIQDLNNIINNN 940
Query: 881 QMTSATKADFIKESGDPNN--EMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSS 938
+ + + E+G+ N E+ +Q + I++G DV + ++A+++
Sbjct: 941 KNNNNNNNNSNTENGNANGNGEIKADDIQSLQDQIDEGKARYDVISNQNKQLQASLAEAN 1000
Query: 939 T 939
T
Sbjct: 1001 T 1001
>GENEDB_PFALCIPARUM|MAL13P1.120 [details] [associations]
symbol:MAL13P1.120 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:AL844509 HSSP:Q60900 TIGRFAMs:TIGR01622
KO:K13091 OMA:VDINIDE RefSeq:XP_001349956.1
ProteinModelPortal:Q8IE99 IntAct:Q8IE99 MINT:MINT-1582995
EnsemblProtists:MAL13P1.120:mRNA GeneID:813670 KEGG:pfa:MAL13P1.120
EuPathDB:PlasmoDB:PF3D7_1321700 ProtClustDB:CLSZ2848098
Uniprot:Q8IE99
Length = 864
Score = 125 (49.1 bits), Expect = 0.00073, P = 0.00073
Identities = 78/346 (22%), Positives = 149/346 (43%)
Query: 449 EHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDS--CNA 506
E+ L + N+++ DK N + +N + K+ ++ K+ K + +
Sbjct: 36 ENKELKNDNLNNNTCDSDKKKTNKREVKRKSKVIN--DNKIDNENKNTKRKKKTNGDVDI 93
Query: 507 NVDKLVIGDISEQIKNIAAENVRKYL-RTHSKDSNASDEDEESFNDKLVSIEREVEESVG 565
N+D+ D E + +NV K + + +D D +++ +D E + E+
Sbjct: 94 NIDENFDEDNDENVDKNVDKNVDKNVDKNDDEDDGEDDGEDDGEDDGEHDGEDDGEDDSD 153
Query: 566 KDIEESL-KNVSDVLFNEK-VENLTMENKKS--IKNECLSPVS-SKSKDLTNENLGHTFE 620
+D E++ KN +D L E V + N+KS IKN S S SK+K ++N H
Sbjct: 154 EDKHENIPKNKADTLKEESDVSDNHHNNRKSKNIKNSIRSKSSNSKTKKEDDDNNIHCNN 213
Query: 621 TLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLK----SKEELPLVKRVDNTIPNSFEFI 676
+ + + +++G KN +K K S +E + DNT +S E
Sbjct: 214 SSQENEQKRKEQLLENKDNKKEG-KNTNSSKVKKRYHTSSDEND--RNNDNT--SSEEER 268
Query: 677 TYTRRQVKPENISNGNNSDNKTDD-----EDSPQVITKPIGSISMRKYETTRQSHLNKPK 731
T +R++ K +N ++ ++N+ D S + S R ++ + N+ +
Sbjct: 269 TKSRKK-KHKNDNSDKKNENRVVDYSSSSSSSSDASNEYSSSDEERDHKKRKIRKTNRSR 327
Query: 732 LFADFPTTSQGNNP-DTHEPPNSSNKRGKSYSFFENYLRRKKERER 776
+ ++S+ N+ D + S + K YS ++ RR +ERER
Sbjct: 328 RISR--SSSESNSSTDNDKRGTSRSSEEKVYSKYDKMKRRDRERER 371
>UNIPROTKB|Q8IE99 [details] [associations]
symbol:MAL13P1.120 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:AL844509 HSSP:Q60900 TIGRFAMs:TIGR01622
KO:K13091 OMA:VDINIDE RefSeq:XP_001349956.1
ProteinModelPortal:Q8IE99 IntAct:Q8IE99 MINT:MINT-1582995
EnsemblProtists:MAL13P1.120:mRNA GeneID:813670 KEGG:pfa:MAL13P1.120
EuPathDB:PlasmoDB:PF3D7_1321700 ProtClustDB:CLSZ2848098
Uniprot:Q8IE99
Length = 864
Score = 125 (49.1 bits), Expect = 0.00073, P = 0.00073
Identities = 78/346 (22%), Positives = 149/346 (43%)
Query: 449 EHSSLPEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIERKLIDKFKSHIESKLDS--CNA 506
E+ L + N+++ DK N + +N + K+ ++ K+ K + +
Sbjct: 36 ENKELKNDNLNNNTCDSDKKKTNKREVKRKSKVIN--DNKIDNENKNTKRKKKTNGDVDI 93
Query: 507 NVDKLVIGDISEQIKNIAAENVRKYL-RTHSKDSNASDEDEESFNDKLVSIEREVEESVG 565
N+D+ D E + +NV K + + +D D +++ +D E + E+
Sbjct: 94 NIDENFDEDNDENVDKNVDKNVDKNVDKNDDEDDGEDDGEDDGEDDGEHDGEDDGEDDSD 153
Query: 566 KDIEESL-KNVSDVLFNEK-VENLTMENKKS--IKNECLSPVS-SKSKDLTNENLGHTFE 620
+D E++ KN +D L E V + N+KS IKN S S SK+K ++N H
Sbjct: 154 EDKHENIPKNKADTLKEESDVSDNHHNNRKSKNIKNSIRSKSSNSKTKKEDDDNNIHCNN 213
Query: 621 TLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLK----SKEELPLVKRVDNTIPNSFEFI 676
+ + + +++G KN +K K S +E + DNT +S E
Sbjct: 214 SSQENEQKRKEQLLENKDNKKEG-KNTNSSKVKKRYHTSSDEND--RNNDNT--SSEEER 268
Query: 677 TYTRRQVKPENISNGNNSDNKTDD-----EDSPQVITKPIGSISMRKYETTRQSHLNKPK 731
T +R++ K +N ++ ++N+ D S + S R ++ + N+ +
Sbjct: 269 TKSRKK-KHKNDNSDKKNENRVVDYSSSSSSSSDASNEYSSSDEERDHKKRKIRKTNRSR 327
Query: 732 LFADFPTTSQGNNP-DTHEPPNSSNKRGKSYSFFENYLRRKKERER 776
+ ++S+ N+ D + S + K YS ++ RR +ERER
Sbjct: 328 RISR--SSSESNSSTDNDKRGTSRSSEEKVYSKYDKMKRRDRERER 371
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 122 (48.0 bits), Expect = 0.00080, P = 0.00080
Identities = 93/474 (19%), Positives = 188/474 (39%)
Query: 454 PEQSTNHDSKKRDKTLLNFNQQTPFQLALNRIE--RKLIDKFKSHIESK--LDSCNANVD 509
P N+++K + N N ++E +K K K +ES DS +++
Sbjct: 65 PRNGNNNNNKNNNNNNNNNNNNNNNNNNKRKLEENKKEEAKKKKKVESSDSSDSSSSDSS 124
Query: 510 KLVIGDISEQIKNIAAENVRKYLR-THSKDSNASDEDEESFNDKLVSIEREVEESVGKDI 568
D ++ K I +K ++ S DS+ SD + S D+ + + E+ K +
Sbjct: 125 SSESEDEKKKKKEIKKVETKKPIKKVESSDSSDSDSSDSSSEDEKKKKDNKKVET--KKV 182
Query: 569 EESLKNVSDV-LFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNENLG-HTFETLPSPI 626
E V E+ + + S +E S K KD + E+ S
Sbjct: 183 ETKKVETKKVETKKEESSDSDSSDSDSSSSESESEDEKKKKDTKKVEIKKEESESESSES 242
Query: 627 LTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPE 686
+ D + +K + ++ + +S+ E K+ + + E + + + + E
Sbjct: 243 ESEDENKDNKKVGTKKEESSDSDSSSSESESEDEKKKKNNKKVEAKKEESSDSESESESE 302
Query: 687 NISNGNNS--DNKTDDE----DSPQVITKPIGSI-SMRKYETTRQSHLNKPKLFADFPTT 739
+ S+ ++S +++++DE DS +V TK GS S E+ ++ K+
Sbjct: 303 SSSSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSESSSESVEDEKMDIEKVEIK---K 359
Query: 740 SQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKDETLTHGQVHPSVETN 799
+ ++ ++ P +S +K + E +K+E +S+S +++ + + S E++
Sbjct: 360 EESSDSESSSPASSESKEEEKMDI-EKEETKKEESSSSSSESEEEQKKSKKEDSDSDESS 418
Query: 800 T-HTILEEVTSSIETVDNGSIETNAMTRIRDDIHLARENNTKFLADPIKDTESTGPSNVI 858
EE +SS E+ D E + D + + K +D +ES
Sbjct: 419 EDEKKKEESSSSSESEDEKKKEDS-------DSESSEDEKKKEDSDSSSSSESEDEDKKK 471
Query: 859 STESNEVIDQTKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNS 912
S+ + K D SSS S+ S++ +D S ++ S+ + S S
Sbjct: 472 KDSSSSESESEKESD-SSSSSSESDSSSSSDSDSSSSSSSSSSSSSSSESESES 524
>SGD|S000002764 [details] [associations]
symbol:SPC110 "Inner plaque spindle pole body (SPB)
component" species:4932 "Saccharomyces cerevisiae" [GO:0005816
"spindle pole body" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000742 "karyogamy involved in conjugation with
cellular fusion" evidence=IGI;IMP] [GO:0005200 "structural
constituent of cytoskeleton" evidence=IPI] [GO:0005823 "central
plaque of spindle pole body" evidence=IDA] [GO:0005822 "inner
plaque of spindle pole body" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007020 "microtubule nucleation"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] SGD:S000002764
GO:GO:0005634 GO:GO:0005200 EMBL:BK006938 eggNOG:NOG12793
GO:GO:0007020 EMBL:U28372 KO:K15262 RefSeq:NP_010648.3
GeneID:851963 KEGG:sce:YDR361C GO:GO:0000742 GO:GO:0005823
GeneTree:ENSGT00700000104848 RefSeq:NP_010643.3 GeneID:851957
KEGG:sce:YDR356W EMBL:Z11582 EMBL:X73297 PIR:S26710 PDB:4DS7
PDBsum:4DS7 ProteinModelPortal:P32380 SMR:P32380 DIP:DIP-702N
IntAct:P32380 MINT:MINT-644728 STRING:P32380 PaxDb:P32380
PeptideAtlas:P32380 EnsemblFungi:YDR356W CYGD:YDR356w OMA:EVRHNND
OrthoDB:EOG4F4WKW NextBio:970062 Genevestigator:P32380
GermOnline:YDR356W GO:GO:0005822 Uniprot:P32380
Length = 944
Score = 125 (49.1 bits), Expect = 0.00082, P = 0.00082
Identities = 94/401 (23%), Positives = 178/401 (44%)
Query: 241 LYANLSIKKVRHLGGKLGDEVVETLQCSTMLELEKFSLK-QLQSHFEEKTASWLYYIARG 299
LY N IK ++H +L E +TL LE E LK +LQ+ +E A
Sbjct: 160 LYIN-EIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAK-------- 210
Query: 300 IDHEPVNARLVSKSIGCCK-RFPGKTCLATRQDVSHWIQELADEVCERLEDD-----LTL 353
++ VN+R V GC + R + LA ++ ++ + D+V E LE++ L L
Sbjct: 211 --NKIVNSRKVDDHSGCIEEREQMERKLA---ELERKLKTVKDQVLE-LENNSDVQSLKL 264
Query: 354 NKRRAQLLTV--------SFTQETDGKVNSCSRSIALASYKLQDIV----EVSMQVINKT 401
+ +L + S +E D ++ + + +L ++ E+ +Q+ K
Sbjct: 265 RSKEDELKNLMNELNELKSNAEEKDTQLEFKKNELRKRTNELNELKIKSDEMDLQLKQKQ 324
Query: 402 NSAPPISDLTPPLLFLGLSASKFSPLGSHPSIQQ----FFKPQ--DHPEPMTSEHSSLPE 455
N + + D L +KFS GS S ++ K + + E +++++S L
Sbjct: 325 NESKRLKDELNEL------ETKFSENGSQSSAKENELKMLKNKIAELEEEISTKNSQLIA 378
Query: 456 QSTNHDSKKRDKTLLNFN-QQTPFQLALNRIE-RKLIDKFKSHIESKLDSCNANVDKLVI 513
+ S T L Q QL E +K DK + I + + D+ +I
Sbjct: 379 KEGKLASLMAQLTQLESKLNQRDSQLGSREEELKKTNDKLQKDIRIAREE-TVSKDERII 437
Query: 514 GDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSI-EREVEESVGKDIEESL 572
D+ +++K + ++ +THS+ +D + ES DKL+ I E +++ + K +
Sbjct: 438 -DLQKKVKQLE-NDLFVIKKTHSESKTITDNELES-KDKLIKILENDLKVAQEK-YSKME 493
Query: 573 KNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTNE 613
K + + FN K+ +E++K+ NE +S +++++ L N+
Sbjct: 494 KELKEREFNYKISESKLEDEKTTLNEKISNLAAENSQLKNK 534
>DICTYBASE|DDB_G0280177 [details] [associations]
symbol:DDB_G0280177 "Hepatoma-derived growth
factor-related protein 2" species:44689 "Dictyostelium discoideum"
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0280177
Pfam:PF00855 EMBL:AAFI02000035 InterPro:IPR000313 PROSITE:PS50812
RefSeq:XP_641286.1 ProteinModelPortal:Q54VR9
EnsemblProtists:DDB0206422 GeneID:8622418 KEGG:ddi:DDB_G0280177
eggNOG:NOG289843 InParanoid:Q54VR9 OMA:SKRESKW Uniprot:Q54VR9
Length = 1221
Score = 126 (49.4 bits), Expect = 0.00087, P = 0.00087
Identities = 91/413 (22%), Positives = 170/413 (41%)
Query: 539 SNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFNEKVENLTMENKKSIKNE 598
++ S+ D +S D S + +E + ES K V ++K E T + I N
Sbjct: 109 NSESEPDSDSDGDYSGSDDSNIESASSSSESESEK----VKTSKKSEKSTSGSSSIINNS 164
Query: 599 CLSPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEE 658
S SS SK ++ + + +L S + + + +S + GS V +K K+ E
Sbjct: 165 SSSSKSSDSKKKSSSSSSSSSSSLSSNLKSESKKSTSSLKSKSNGSSKVKASKPDKTPE- 223
Query: 659 LPLVKRVDNT-IPNSFEFITYTRRQVKPENISNGNNSDNKTDDEDSPQVITKPIGSISMR 717
P+ +T E + V P S+ ++S K +S K I SIS
Sbjct: 224 -PIKTESSSTKSEGKTEKAKLKKETVSPTLSSSSSSSSKKKSSTNSSNGKRK-IKSIS-- 279
Query: 718 KYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERL 777
+ S + L +D + S + + + +K+ K + +KKE+
Sbjct: 280 --SDSESSDSDSDSL-SDSDSMSDSDFSSSED--EEKHKKHKRLKKLVDQPPKKKEKLS- 333
Query: 778 NSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIE--TVDNGSIETNAMTRIRDDIHLAR 835
N S K+ +V ++ T TI E SI+ + + S +++ +R I
Sbjct: 334 NGGSKKEIASKSSKVTTAITT---TIAETPQQSIKKSSTSSSSSSSSSSPPLRSPITTTT 390
Query: 836 ENNTKFLADPIKDTESTGPSNVISTESNEVIDQ---TKIRDVSSSDHSQMTSATKADFIK 892
T L P T+ N +S+ SN+++ + TKI VSSS T+ + + +
Sbjct: 391 TTTTTTLMSP--PTQHQSNQNSLSS-SNKLLSKLTNTKIPIVSSSS---TTTTSNGNGLG 444
Query: 893 ESGDPNNEMCKSTVQFHSNSINKGNGNADVSPMDTVDIINTIADSSTVDSAIN 945
G + S +N+ + GN N+ + +++ I N+ + ++ +D +I+
Sbjct: 445 NGGSIIGVIGNSI----TNNGSSGNSNSSSNSINSSSITNSNS-TNIIDFSID 492
>GENEDB_PFALCIPARUM|PFL0115w [details] [associations]
symbol:PFL0115w "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR026983 EMBL:AE014188
GO:GO:0003777 GO:GO:0007018 PANTHER:PTHR10676 RefSeq:XP_001350432.1
ProteinModelPortal:Q8I622 EnsemblProtists:PFL0115w:mRNA
GeneID:811076 KEGG:pfa:PFL0115w EuPathDB:PlasmoDB:PF3D7_1202300
HOGENOM:HOG000212657 ProtClustDB:CLSZ2446668 Uniprot:Q8I622
Length = 5729
Score = 138 (53.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 95/503 (18%), Positives = 204/503 (40%)
Query: 448 SEHSSLPEQSTNHDSKKRDKTL----LNFNQQTPFQLALNRIERKLIDKFKSHIESKLDS 503
SEH++ P D+K+++KT+ +++ + + N ++K ++ K + + +D
Sbjct: 3402 SEHNTKPISIKKKDNKEKNKTIFINSVDYIKNKNEENETNEKKKKNNNENKQN-KDNIDE 3460
Query: 504 CNANVD-------KLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFND-KLVS 555
N N KL + + N +NV + ++ + N DE + N L
Sbjct: 3461 KNKNNQTEKIKDPKLNLQNEENNNNNNTQDNVHNNIIINNNNINNYDEHIKQNNHYNLYP 3520
Query: 556 IEREVEESVGKDIE---ESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTN 612
++ K+ + E +N++ K++N T + KK KN+ + S++K++
Sbjct: 3521 TNKKTHNEQNKNSQGKGEETQNINQNENKNKIKNSTNKKKKK-KNQT-QKIFSQNKNVKQ 3578
Query: 613 ENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIP-- 670
EN+ P P + + H R + N E K K+K+++ D P
Sbjct: 3579 ENV-------PIP---QNHNTHGIQHKRIHDTLNSKEKKEKKNKQKIINTNNNDKNEPAD 3628
Query: 671 -NSFEFITYTRRQVKPENISNGNNSD----NKTDDEDSPQVITKPIGSISMRKYETTRQS 725
N + T + VK I N++ N + ++ Q K I M++ T +
Sbjct: 3629 TNIKDNSNNTIKNVKLNTIQKKNHTKQSIKNIKKESNTIQEQNKKIKKTQMKENMNTNEQ 3688
Query: 726 HLNKPKL-FADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKD 784
++ K + S+ + + K K+ + N + E + K
Sbjct: 3689 NVKHTKQKIGNQNNKSKAKEKEKTNKITNIKKANKNDKY--NIIMSSSHDE----DNTKQ 3742
Query: 785 ETLTHGQV-HPSVETNTHTILE---EVTSSIETVDNGSIETNA-MTRIRDDIHLARENNT 839
E H Q+ + +E N + + EV + + VDN + A + +I + +A NN
Sbjct: 3743 ELQKHDQIINQELECNQKNVQQPTCEVQNKLHNVDNEQDKKQAPLNKINEQNEIA--NNQ 3800
Query: 840 KFLADPIKDTESTGPSNVISTESNEVI--DQTKIRDVSSSDH-SQMTSATKADFIKESGD 896
+ + + ++++ + +++ ++ + D KI+ ++ ++ +M + + + D
Sbjct: 3801 DIIEN-MDNSKNINEAKLLNNKTMNLQNGDHNKIKHITGTEECKKMEKSNNNNNDDHNND 3859
Query: 897 PNNEMCKSTVQFHSNSINKGNGN 919
NN+ H+N N +GN
Sbjct: 3860 HNNDHNNDHNNDHNNDHNNDHGN 3882
Score = 53 (23.7 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 215 KVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIK-KVRHLGGKLGDE---VVETLQCSTM 270
K + + +HK + + + S+++ + SIK K+ H + + TL+CST+
Sbjct: 1347 KTITNIQNKIHKEKDKKNIQFISLNISFVLNSIKTKLNHSKKFFFNNLHFIFTTLKCSTL 1406
Query: 271 LELEKFS 277
E+ K+S
Sbjct: 1407 SEITKYS 1413
>UNIPROTKB|Q8I622 [details] [associations]
symbol:PFL0115w "Dynein heavy chain, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR026983 EMBL:AE014188 GO:GO:0003777
GO:GO:0007018 PANTHER:PTHR10676 RefSeq:XP_001350432.1
ProteinModelPortal:Q8I622 EnsemblProtists:PFL0115w:mRNA
GeneID:811076 KEGG:pfa:PFL0115w EuPathDB:PlasmoDB:PF3D7_1202300
HOGENOM:HOG000212657 ProtClustDB:CLSZ2446668 Uniprot:Q8I622
Length = 5729
Score = 138 (53.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 95/503 (18%), Positives = 204/503 (40%)
Query: 448 SEHSSLPEQSTNHDSKKRDKTL----LNFNQQTPFQLALNRIERKLIDKFKSHIESKLDS 503
SEH++ P D+K+++KT+ +++ + + N ++K ++ K + + +D
Sbjct: 3402 SEHNTKPISIKKKDNKEKNKTIFINSVDYIKNKNEENETNEKKKKNNNENKQN-KDNIDE 3460
Query: 504 CNANVD-------KLVIGDISEQIKNIAAENVRKYLRTHSKDSNASDEDEESFND-KLVS 555
N N KL + + N +NV + ++ + N DE + N L
Sbjct: 3461 KNKNNQTEKIKDPKLNLQNEENNNNNNTQDNVHNNIIINNNNINNYDEHIKQNNHYNLYP 3520
Query: 556 IEREVEESVGKDIE---ESLKNVSDVLFNEKVENLTMENKKSIKNECLSPVSSKSKDLTN 612
++ K+ + E +N++ K++N T + KK KN+ + S++K++
Sbjct: 3521 TNKKTHNEQNKNSQGKGEETQNINQNENKNKIKNSTNKKKKK-KNQT-QKIFSQNKNVKQ 3578
Query: 613 ENLGHTFETLPSPILTSDRDIHTSTPCRRKGSKNVFENKTLKSKEELPLVKRVDNTIP-- 670
EN+ P P + + H R + N E K K+K+++ D P
Sbjct: 3579 ENV-------PIP---QNHNTHGIQHKRIHDTLNSKEKKEKKNKQKIINTNNNDKNEPAD 3628
Query: 671 -NSFEFITYTRRQVKPENISNGNNSD----NKTDDEDSPQVITKPIGSISMRKYETTRQS 725
N + T + VK I N++ N + ++ Q K I M++ T +
Sbjct: 3629 TNIKDNSNNTIKNVKLNTIQKKNHTKQSIKNIKKESNTIQEQNKKIKKTQMKENMNTNEQ 3688
Query: 726 HLNKPKL-FADFPTTSQGNNPDTHEPPNSSNKRGKSYSFFENYLRRKKERERLNSKSCKD 784
++ K + S+ + + K K+ + N + E + K
Sbjct: 3689 NVKHTKQKIGNQNNKSKAKEKEKTNKITNIKKANKNDKY--NIIMSSSHDE----DNTKQ 3742
Query: 785 ETLTHGQV-HPSVETNTHTILE---EVTSSIETVDNGSIETNA-MTRIRDDIHLARENNT 839
E H Q+ + +E N + + EV + + VDN + A + +I + +A NN
Sbjct: 3743 ELQKHDQIINQELECNQKNVQQPTCEVQNKLHNVDNEQDKKQAPLNKINEQNEIA--NNQ 3800
Query: 840 KFLADPIKDTESTGPSNVISTESNEVI--DQTKIRDVSSSDH-SQMTSATKADFIKESGD 896
+ + + ++++ + +++ ++ + D KI+ ++ ++ +M + + + D
Sbjct: 3801 DIIEN-MDNSKNINEAKLLNNKTMNLQNGDHNKIKHITGTEECKKMEKSNNNNNDDHNND 3859
Query: 897 PNNEMCKSTVQFHSNSINKGNGN 919
NN+ H+N N +GN
Sbjct: 3860 HNNDHNNDHNNDHNNDHNNDHGN 3882
Score = 53 (23.7 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 215 KVLAKLVCGLHKPQKQSILPQSSVSMLYANLSIK-KVRHLGGKLGDE---VVETLQCSTM 270
K + + +HK + + + S+++ + SIK K+ H + + TL+CST+
Sbjct: 1347 KTITNIQNKIHKEKDKKNIQFISLNISFVLNSIKTKLNHSKKFFFNNLHFIFTTLKCSTL 1406
Query: 271 LELEKFS 277
E+ K+S
Sbjct: 1407 SEITKYS 1413
>CGD|CAL0001468 [details] [associations]
symbol:SYS3 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0043001
"Golgi to plasma membrane protein transport" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 CGD:CAL0001468
eggNOG:NOG12793 EMBL:AACQ01000131 GO:GO:0000042 Gene3D:1.10.220.60
RefSeq:XP_713243.1 GeneID:3645119 KEGG:cal:CaO19.2410
Uniprot:Q59UF5
Length = 895
Score = 124 (48.7 bits), Expect = 0.00098, P = 0.00098
Identities = 109/529 (20%), Positives = 216/529 (40%)
Query: 463 KKRDKTLLNFNQQTPFQLALNRI-ERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIK 521
KK+++ + F + ++ + E KL+ ++ + + K N + KL + + K
Sbjct: 143 KKKNEIIKIFEKVLQENTPVSSLSEGKLLVEYLNGLNEKTKLLNGEIRKLTKDNNTMNFK 202
Query: 522 NIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFN 581
+ E K L K + +++E K+ S+ E+E + ++ K++ D
Sbjct: 203 IVKLEESNKELNNDVKRLDTMQKEKEVMGKKIDSMSEELE-IINNQNDKLTKDLKDK--E 259
Query: 582 EKVENLTME-NKKSIKNECL-SPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPC 639
EK+E+L +E + K + L S SS SK+L E L E +P+ + D+
Sbjct: 260 EKIESLKLEITDRDNKIKDLESNTSSNSKELNTE-LEEPKE-VPTEKVNQDKSSSGEENT 317
Query: 640 RRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTD 699
+ S + + E+ +K +T E +T R +K + N N + + D
Sbjct: 318 DKDSSVGDSSDNSDVLNTEISQLKSQLSTKETEVEELTNEVRTLKSQ--LNDKNEEIE-D 374
Query: 700 DEDSPQVITKPI--GSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKR 757
DS + I + ++ + +++S N+ + T +Q N D NS K
Sbjct: 375 LRDSVKEIGNELVTSKDEIKSLKNSQKSTDNEDSTTKE-DTNTQIN--DWELKYNSQLKE 431
Query: 758 GKSYSF-FENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDN 816
K + + KE+E+ KS +D+ Q +T E T ++ N
Sbjct: 432 NKELKEELDVATKESKEKEKERKKS-EDQLRKQIQTLKQKLESTENKFESKTKDLK---N 487
Query: 817 GSIETNAMTRIRDDIHLARENNT--KFLADPIKD--TESTGPSNVISTESNEVIDQ---- 868
S E + + ++ + N++ K +K T N + T+ +E+
Sbjct: 488 LSEEKEKLEKRISELSKFKSNDSSLKLEISSLKSSLTNKDNSINELKTQVDELKQSNKSL 547
Query: 869 -TKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPM-- 925
+K+ ++S S++ +++ DF+K D N + K V N + N+ V+ +
Sbjct: 548 NSKVEELSKSNNELQSNSM--DFLK---DKNELLTKQEVLME----NTKSLNSQVTKLQQ 598
Query: 926 DTVDIINTIADSST-VDSAINIADPTKIICDKCSQPIDINELQ-EHQDY 972
+ D+I + + +D I IAD ++ D S EL + ++Y
Sbjct: 599 EKQDVITELEKTKNKLD--IVIADKSQSANDMLSYKKQHEELMMKSKEY 645
>UNIPROTKB|Q59UF5 [details] [associations]
symbol:SYS3 "Potential GRIP domain Golgi protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000237 Pfam:PF01465
PROSITE:PS50913 CGD:CAL0001468 eggNOG:NOG12793 EMBL:AACQ01000131
GO:GO:0000042 Gene3D:1.10.220.60 RefSeq:XP_713243.1 GeneID:3645119
KEGG:cal:CaO19.2410 Uniprot:Q59UF5
Length = 895
Score = 124 (48.7 bits), Expect = 0.00098, P = 0.00098
Identities = 109/529 (20%), Positives = 216/529 (40%)
Query: 463 KKRDKTLLNFNQQTPFQLALNRI-ERKLIDKFKSHIESKLDSCNANVDKLVIGDISEQIK 521
KK+++ + F + ++ + E KL+ ++ + + K N + KL + + K
Sbjct: 143 KKKNEIIKIFEKVLQENTPVSSLSEGKLLVEYLNGLNEKTKLLNGEIRKLTKDNNTMNFK 202
Query: 522 NIAAENVRKYLRTHSKDSNASDEDEESFNDKLVSIEREVEESVGKDIEESLKNVSDVLFN 581
+ E K L K + +++E K+ S+ E+E + ++ K++ D
Sbjct: 203 IVKLEESNKELNNDVKRLDTMQKEKEVMGKKIDSMSEELE-IINNQNDKLTKDLKDK--E 259
Query: 582 EKVENLTME-NKKSIKNECL-SPVSSKSKDLTNENLGHTFETLPSPILTSDRDIHTSTPC 639
EK+E+L +E + K + L S SS SK+L E L E +P+ + D+
Sbjct: 260 EKIESLKLEITDRDNKIKDLESNTSSNSKELNTE-LEEPKE-VPTEKVNQDKSSSGEENT 317
Query: 640 RRKGSKNVFENKTLKSKEELPLVKRVDNTIPNSFEFITYTRRQVKPENISNGNNSDNKTD 699
+ S + + E+ +K +T E +T R +K + N N + + D
Sbjct: 318 DKDSSVGDSSDNSDVLNTEISQLKSQLSTKETEVEELTNEVRTLKSQ--LNDKNEEIE-D 374
Query: 700 DEDSPQVITKPI--GSISMRKYETTRQSHLNKPKLFADFPTTSQGNNPDTHEPPNSSNKR 757
DS + I + ++ + +++S N+ + T +Q N D NS K
Sbjct: 375 LRDSVKEIGNELVTSKDEIKSLKNSQKSTDNEDSTTKE-DTNTQIN--DWELKYNSQLKE 431
Query: 758 GKSYSF-FENYLRRKKERERLNSKSCKDETLTHGQVHPSVETNTHTILEEVTSSIETVDN 816
K + + KE+E+ KS +D+ Q +T E T ++ N
Sbjct: 432 NKELKEELDVATKESKEKEKERKKS-EDQLRKQIQTLKQKLESTENKFESKTKDLK---N 487
Query: 817 GSIETNAMTRIRDDIHLARENNT--KFLADPIKD--TESTGPSNVISTESNEVIDQ---- 868
S E + + ++ + N++ K +K T N + T+ +E+
Sbjct: 488 LSEEKEKLEKRISELSKFKSNDSSLKLEISSLKSSLTNKDNSINELKTQVDELKQSNKSL 547
Query: 869 -TKIRDVSSSDHSQMTSATKADFIKESGDPNNEMCKSTVQFHSNSINKGNGNADVSPM-- 925
+K+ ++S S++ +++ DF+K D N + K V N + N+ V+ +
Sbjct: 548 NSKVEELSKSNNELQSNSM--DFLK---DKNELLTKQEVLME----NTKSLNSQVTKLQQ 598
Query: 926 DTVDIINTIADSST-VDSAINIADPTKIICDKCSQPIDINELQ-EHQDY 972
+ D+I + + +D I IAD ++ D S EL + ++Y
Sbjct: 599 EKQDVITELEKTKNKLD--IVIADKSQSANDMLSYKKQHEELMMKSKEY 645
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1041 1010 0.00079 123 3 11 23 0.46 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 149
No. of states in DFA: 623 (66 KB)
Total size of DFA: 455 KB (2215 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 132.53u 0.15s 132.68t Elapsed: 00:00:15
Total cpu time: 132.58u 0.15s 132.73t Elapsed: 00:00:15
Start: Thu Aug 15 16:31:04 2013 End: Thu Aug 15 16:31:19 2013
WARNINGS ISSUED: 1