Your job contains 1 sequence.
>psy16216
YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGFGP
DNNDEDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCS
AGIAHNKVK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16216
(129 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1309893 - symbol:Polh "polymerase (DNA directed), eta... 269 2.2e-22 1
ZFIN|ZDB-GENE-060421-4949 - symbol:polh "polymerase (DNA ... 265 7.1e-22 1
UNIPROTKB|E2RC81 - symbol:POLH "Uncharacterized protein" ... 260 2.2e-21 1
MGI|MGI:1891457 - symbol:Polh "polymerase (DNA directed),... 256 5.7e-21 1
UNIPROTKB|B4DG64 - symbol:POLH "DNA polymerase eta" speci... 246 6.0e-20 1
UNIPROTKB|F1MZ79 - symbol:POLH "Uncharacterized protein" ... 246 7.1e-20 1
UNIPROTKB|Q9Y253 - symbol:POLH "DNA polymerase eta" speci... 246 7.2e-20 1
UNIPROTKB|F1RRJ6 - symbol:POLH "Uncharacterized protein" ... 237 6.4e-19 1
FB|FBgn0037141 - symbol:DNApol-eta "DNApol-eta" species:7... 207 1.6e-15 1
UNIPROTKB|F1NCM3 - symbol:POLH "Uncharacterized protein" ... 203 2.6e-15 1
UNIPROTKB|F1NAG6 - symbol:POLH "Uncharacterized protein" ... 203 2.8e-15 1
TAIR|locus:2156309 - symbol:POLH "Y-family DNA polymerase... 174 3.5e-12 1
WB|WBGene00018721 - symbol:polh-1 species:6239 "Caenorhab... 149 1.4e-09 1
UNIPROTKB|J3KRG0 - symbol:POLI "DNA polymerase iota" spec... 95 5.7e-09 2
UNIPROTKB|I3LUT8 - symbol:LOC100737500 "Uncharacterized p... 132 7.6e-09 1
UNIPROTKB|J3QR36 - symbol:POLI "DNA polymerase iota" spec... 95 2.2e-08 2
UNIPROTKB|J3KTN3 - symbol:POLI "DNA polymerase iota" spec... 95 4.2e-08 2
UNIPROTKB|Q5JTF2 - symbol:POLH "DNA polymerase eta" speci... 116 3.8e-07 1
UNIPROTKB|J3KSW2 - symbol:POLI "DNA polymerase iota" spec... 95 1.1e-06 2
UNIPROTKB|Q9UNA4 - symbol:POLI "DNA polymerase iota" spec... 95 1.6e-06 2
UNIPROTKB|G5EH81 - symbol:MGCH7_ch7g688 "Sister chromatid... 120 2.1e-06 1
UNIPROTKB|F1PDA5 - symbol:POLI "Uncharacterized protein" ... 94 9.4e-06 2
RGD|1305212 - symbol:Poli "polymerase (DNA directed), iot... 90 3.4e-05 2
UNIPROTKB|J3KQ09 - symbol:POLI "DNA polymerase iota" spec... 102 0.00018 1
UNIPROTKB|Q83EN5 - symbol:dinP "DNA polymerase IV" specie... 83 0.00068 2
TIGR_CMR|CBU_0280 - symbol:CBU_0280 "DNA-damage-inducible... 83 0.00068 2
>RGD|1309893 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta" species:10116
"Rattus norvegicus" [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA;ISO] [GO:0006301 "postreplication repair"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010225 "response to UV-C" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1309893 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
EMBL:CH473987 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML OrthoDB:EOG4RBQJ8 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 IPI:IPI00194322
RefSeq:NP_001101674.1 UniGene:Rn.53711 Ensembl:ENSRNOT00000026049
GeneID:316235 KEGG:rno:316235 UCSC:RGD:1309893 NextBio:670614
Uniprot:D4ADZ0
Length = 689
Score = 269 (99.8 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 64/136 (47%), Positives = 88/136 (64%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ ++S F+ ++ERASIDEAYIDLT+ V ER++ + G ++A L +T++ G
Sbjct: 92 YREASVEVMEIMSHFA-VIERASIDEAYIDLTNAVQERLEKLQGQPVSADLLPSTYIEGL 150
Query: 59 --GPDNND----EDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVL 112
GP D ED RK G+++WLG + D TS D + L + VIVEE+RAA+
Sbjct: 151 PRGPAVEDTVEKEDIRKQGLLQWLGSLEKDDPTS-----PDLR-LTVGAVIVEEMRAAIE 204
Query: 113 SKTQFHCSAGIAHNKV 128
KT F CSAGI+HNKV
Sbjct: 205 RKTGFQCSAGISHNKV 220
>ZFIN|ZDB-GENE-060421-4949 [details] [associations]
symbol:polh "polymerase (DNA directed), eta"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 ZFIN:ZDB-GENE-060421-4949 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AL929536 IPI:IPI00758987 Ensembl:ENSDART00000139589
OMA:MKSLEKH ArrayExpress:F1Q7Z9 Bgee:F1Q7Z9 Uniprot:F1Q7Z9
Length = 749
Score = 265 (98.3 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 67/135 (49%), Positives = 87/135 (64%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMK--SIGHIAASQLSNTFVVGF 58
YR A EVI V+S F+ ++ERASIDEAY+DLT V ER+K S+ I A QL NT + GF
Sbjct: 92 YREASVEVIEVMSRFA-VIERASIDEAYMDLTASVQERLKNTSVQDITAQQLKNTHIQGF 150
Query: 59 GP--DNN--DEDA-RKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLS 113
+N D DA R AG+ +WL + S T++S D + LA+ +IVE++RAAV
Sbjct: 151 PTQQENTHLDRDAQRAAGLQQWLDLLSSSTESS----PADLR-LAVGALIVEQMRAAVEE 205
Query: 114 KTQFHCSAGIAHNKV 128
T F CSAGI+HNKV
Sbjct: 206 HTGFRCSAGISHNKV 220
>UNIPROTKB|E2RC81 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0003887
GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:AAEX03008345 RefSeq:XP_532150.2
Ensembl:ENSCAFT00000003028 GeneID:474915 KEGG:cfa:474915
NextBio:20850851 Uniprot:E2RC81
Length = 712
Score = 260 (96.6 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 64/137 (46%), Positives = 87/137 (63%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ +LS F+ ++ERASIDEAYIDLT V ER++++ G I+A L T++ G
Sbjct: 92 YREASVEVMGILSRFA-VIERASIDEAYIDLTSAVQERLQNLQGQPISADLLPTTYIEGL 150
Query: 59 --GP---DNND--EDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAV 111
GP + D E+ RK G+ +WL + D +TS D Q L + VIVEE+RAA+
Sbjct: 151 PQGPTTAEGTDQKEETRKQGLFQWLDSLQIDNNTS-----PDLQ-LTVGAVIVEEMRAAI 204
Query: 112 LSKTQFHCSAGIAHNKV 128
+T F CSAGI+HNKV
Sbjct: 205 ERETGFQCSAGISHNKV 221
>MGI|MGI:1891457 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta (RAD 30
related)" species:10090 "Mus musculus" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IDA] [GO:0006301
"postreplication repair" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1891457 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 HOGENOM:HOG000115605 HOVERGEN:HBG053633 OMA:SPPLTML
OrthoDB:EOG4RBQJ8 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AB027128 EMBL:AB037184 EMBL:AK036296 IPI:IPI00122040
RefSeq:NP_109640.1 UniGene:Mm.311585 ProteinModelPortal:Q9JJN0
SMR:Q9JJN0 IntAct:Q9JJN0 STRING:Q9JJN0 PhosphoSite:Q9JJN0
PRIDE:Q9JJN0 Ensembl:ENSMUST00000024749 GeneID:80905 KEGG:mmu:80905
UCSC:uc008crx.1 GeneTree:ENSGT00530000062942 InParanoid:Q9JJN0
NextBio:350254 Bgee:Q9JJN0 CleanEx:MM_POLH Genevestigator:Q9JJN0
GermOnline:ENSMUSG00000023953 Uniprot:Q9JJN0
Length = 694
Score = 256 (95.2 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 63/136 (46%), Positives = 87/136 (63%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ ++S F+ ++ERASIDEAYIDLT V ER++ + G I+A L +T++ G
Sbjct: 92 YREASVEVMEIMSYFA-VIERASIDEAYIDLTSAVQERLQKLQGQPISADLLPSTYIEGL 150
Query: 59 --GPDNND----EDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVL 112
GP + E RK G+++WL + SD TS D + L + +IVEE+RAA+
Sbjct: 151 PRGPTVEETVQKEAIRKQGLLQWLDSLQSDDPTS-----PDLR-LTVGAMIVEEMRAAIE 204
Query: 113 SKTQFHCSAGIAHNKV 128
SKT F CSAGI+HNKV
Sbjct: 205 SKTGFQCSAGISHNKV 220
>UNIPROTKB|B4DG64 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0006301
GO:GO:0003887 GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879
EMBL:AL353602 EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181
HOVERGEN:HBG053633 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AK294430 IPI:IPI00646080 SMR:B4DG64 STRING:B4DG64
Ensembl:ENST00000535400 Uniprot:B4DG64
Length = 651
Score = 246 (91.7 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 61/137 (44%), Positives = 84/137 (61%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ ++S F+ ++ERASIDEAY+DLT V ER++ + G I+A L +T++ G
Sbjct: 30 YREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGL 88
Query: 59 --GPDNNDEDA-----RKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAV 111
GP +E RK G+ +WL + D TS D Q L + VIVEE+RAA+
Sbjct: 89 PQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTS-----PDLQ-LTVGAVIVEEMRAAI 142
Query: 112 LSKTQFHCSAGIAHNKV 128
+T F CSAGI+HNKV
Sbjct: 143 ERETGFQCSAGISHNKV 159
>UNIPROTKB|F1MZ79 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:DAAA02055099 IPI:IPI00691559 Ensembl:ENSBTAT00000007900
Uniprot:F1MZ79
Length = 710
Score = 246 (91.7 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 59/137 (43%), Positives = 87/137 (63%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGH--IAASQLSNTFVVGF 58
YR+A EV+ V+S F+ ++ER SIDEAY+DLT V ER++ + + I+A L T + GF
Sbjct: 91 YRDASMEVMEVMSRFA-VMERGSIDEAYLDLTSAVQERLQKLQNQPISADLLPTTCIEGF 149
Query: 59 --GPDNND-----EDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAV 111
GP + E+ RK G+++WL + +++ +S D Q L + VIVEE+RAA+
Sbjct: 150 PQGPTTTEGTVEKEERRKQGLLQWLDSLQTESTSS-----PDLQ-LTMGAVIVEEMRAAI 203
Query: 112 LSKTQFHCSAGIAHNKV 128
+T F CSAGI+HNKV
Sbjct: 204 ERQTGFQCSAGISHNKV 220
>UNIPROTKB|Q9Y253 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IDA]
[GO:0010225 "response to UV-C" evidence=IDA] [GO:0006282
"regulation of DNA repair" evidence=TAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_216
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0006282
GO:GO:0003887 GO:GO:0006290 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CleanEx:HS_POLH KO:K03509 EMBL:AL353602
EMBL:AB024313 EMBL:AF158185 EMBL:AB038008 EMBL:AY388614
EMBL:AL355802 EMBL:BC015742 IPI:IPI00008011 IPI:IPI00552037
RefSeq:NP_006493.1 UniGene:Hs.655467 PDB:2I5O PDB:2LSK PDB:3MR2
PDB:3MR3 PDB:3MR5 PDB:3MR6 PDB:3SI8 PDB:3TQ1 PDB:4DL2 PDB:4DL3
PDB:4DL4 PDB:4DL5 PDB:4DL6 PDB:4DL7 PDB:4ECQ PDB:4ECR PDB:4ECS
PDB:4ECT PDB:4ECU PDB:4ECV PDB:4ECW PDB:4ECX PDB:4ECY PDB:4ECZ
PDB:4ED0 PDB:4ED1 PDB:4ED2 PDB:4ED3 PDB:4ED6 PDB:4ED7 PDB:4ED8
PDB:4EEY PDBsum:2I5O PDBsum:2LSK PDBsum:3MR2 PDBsum:3MR3
PDBsum:3MR5 PDBsum:3MR6 PDBsum:3SI8 PDBsum:3TQ1 PDBsum:4DL2
PDBsum:4DL3 PDBsum:4DL4 PDBsum:4DL5 PDBsum:4DL6 PDBsum:4DL7
PDBsum:4ECQ PDBsum:4ECR PDBsum:4ECS PDBsum:4ECT PDBsum:4ECU
PDBsum:4ECV PDBsum:4ECW PDBsum:4ECX PDBsum:4ECY PDBsum:4ECZ
PDBsum:4ED0 PDBsum:4ED1 PDBsum:4ED2 PDBsum:4ED3 PDBsum:4ED6
PDBsum:4ED7 PDBsum:4ED8 PDBsum:4EEY ProteinModelPortal:Q9Y253
SMR:Q9Y253 IntAct:Q9Y253 MINT:MINT-2789553 STRING:Q9Y253
PhosphoSite:Q9Y253 DMDM:59798441 PRIDE:Q9Y253
Ensembl:ENST00000372226 Ensembl:ENST00000372236 GeneID:5429
KEGG:hsa:5429 UCSC:uc003ovq.4 CTD:5429 GeneCards:GC06P043543
HGNC:HGNC:9181 HPA:HPA006721 HPA:HPA026762 MIM:278750 MIM:603968
neXtProt:NX_Q9Y253 Orphanet:90342 PharmGKB:PA279
HOGENOM:HOG000115605 HOVERGEN:HBG053633 InParanoid:Q9Y253
OMA:SPPLTML OrthoDB:EOG4RBQJ8 PhylomeDB:Q9Y253 SABIO-RK:Q9Y253
BindingDB:Q9Y253 ChEMBL:CHEMBL5542 EvolutionaryTrace:Q9Y253
GenomeRNAi:5429 NextBio:21005 ArrayExpress:Q9Y253 Bgee:Q9Y253
Genevestigator:Q9Y253 GermOnline:ENSG00000170734 InterPro:IPR017061
PIRSF:PIRSF036603 Uniprot:Q9Y253
Length = 713
Score = 246 (91.7 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 61/137 (44%), Positives = 84/137 (61%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ ++S F+ ++ERASIDEAY+DLT V ER++ + G I+A L +T++ G
Sbjct: 92 YREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGL 150
Query: 59 --GPDNNDEDA-----RKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAV 111
GP +E RK G+ +WL + D TS D Q L + VIVEE+RAA+
Sbjct: 151 PQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTS-----PDLQ-LTVGAVIVEEMRAAI 204
Query: 112 LSKTQFHCSAGIAHNKV 128
+T F CSAGI+HNKV
Sbjct: 205 ERETGFQCSAGISHNKV 221
>UNIPROTKB|F1RRJ6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509 CTD:5429
OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:CR974460 RefSeq:XP_003356678.1
UniGene:Ssc.83954 Ensembl:ENSSSCT00000001879 GeneID:100153104
KEGG:ssc:100153104 Uniprot:F1RRJ6
Length = 698
Score = 237 (88.5 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 59/138 (42%), Positives = 85/138 (61%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ V+S F+ ++ERASIDEA++DLT V ER++ + G ++A L T++ GF
Sbjct: 92 YREASAEVMEVMSRFA-MIERASIDEAFVDLTSAVRERLQKLQGQPVSADLLPTTYIEGF 150
Query: 59 GPDN--------NDEDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAA 110
P E+ RK G+++WL + SD +TS E +L + VIVEE+RAA
Sbjct: 151 -PQGLTTAEGTVEKEEMRKQGLLQWLDSLQSD-NTSSPE-----LQLTVGAVIVEEMRAA 203
Query: 111 VLSKTQFHCSAGIAHNKV 128
+ +T CSAGI+HNKV
Sbjct: 204 IERQTGLQCSAGISHNKV 221
>FB|FBgn0037141 [details] [associations]
symbol:DNApol-eta "DNApol-eta" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0000724 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HSSP:P96022 InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AY058771
EMBL:AB049433 EMBL:AB036766 IntAct:Q9GNC0 STRING:Q9GNC0
FlyBase:FBgn0037141 InParanoid:Q9GNC0 OrthoDB:EOG4XPNX1
Uniprot:Q9GNC0
Length = 885
Score = 207 (77.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 55/138 (39%), Positives = 77/138 (55%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI--GHIAAS--QLSNTFVV 56
YR+AG+EV VL F+ ++ERAS+DEAY+D+T+ V+ RM+ + G A +L NTF V
Sbjct: 101 YRDAGKEVANVLQRFTQLLERASVDEAYLDITETVNHRMQQMQSGAFALQPQELVNTFAV 160
Query: 57 GF---GPDNNDEDARKAGVM---EWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAA 110
G+ G N R A E Y D + + D + L I + E+RAA
Sbjct: 161 GYPSIGDYVNKITNRFANPYMDDERYQMSYDQNDLPAVRQS-DIR-LLIGASVAGEVRAA 218
Query: 111 VLSKTQFHCSAGIAHNKV 128
V +T + CSAGIAHNK+
Sbjct: 219 VKKETGYECSAGIAHNKI 236
>UNIPROTKB|F1NCM3 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 EMBL:AADN02011866
EMBL:AADN02011865 IPI:IPI00818532 Ensembl:ENSGALT00000038044
ArrayExpress:F1NCM3 Uniprot:F1NCM3
Length = 657
Score = 203 (76.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 60/133 (45%), Positives = 71/133 (53%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGF-- 58
YR A EV+ VLS F+ I ERASI + Y+DLT ER A L TFV G
Sbjct: 92 YREASAEVMEVLSRFAAI-ERASIFKGYLDLTGSARERXXX-----AELLPTTFVQGLPA 145
Query: 59 --GPDNND-EDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKT 115
G D E+ R+ G+ EWL + D N D Q LA+ VIVEEIR AV T
Sbjct: 146 EPGLQPADKEELRRRGLQEWLASLSFDN-----VNCPDLQ-LAMGAVIVEEIRVAVEKAT 199
Query: 116 QFHCSAGIAHNKV 128
F CSAGI+HNK+
Sbjct: 200 GFRCSAGISHNKM 212
>UNIPROTKB|F1NAG6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AADN02011866 EMBL:AADN02011865 IPI:IPI00596429
Ensembl:ENSGALT00000016798 ArrayExpress:F1NAG6 Uniprot:F1NAG6
Length = 686
Score = 203 (76.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 60/133 (45%), Positives = 71/133 (53%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGF-- 58
YR A EV+ VLS F+ I ERASI + Y+DLT ER A L TFV G
Sbjct: 92 YREASAEVMEVLSRFAAI-ERASIFKGYLDLTGSARERXXX-----AELLPTTFVQGLPA 145
Query: 59 --GPDNND-EDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKT 115
G D E+ R+ G+ EWL + D N D Q LA+ VIVEEIR AV T
Sbjct: 146 EPGLQPADKEELRRRGLQEWLASLSFDN-----VNCPDLQ-LAMGAVIVEEIRVAVEKAT 199
Query: 116 QFHCSAGIAHNKV 128
F CSAGI+HNK+
Sbjct: 200 GFRCSAGISHNKM 212
>TAIR|locus:2156309 [details] [associations]
symbol:POLH "Y-family DNA polymerase H" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010224 "response to UV-B" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0042732 "D-xylose metabolic process" evidence=RCA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:CP002688
GO:GO:0003684 GO:GO:0010224 GO:GO:0003887 GO:GO:0042276
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AJ416380 IPI:IPI00537089
RefSeq:NP_568638.2 UniGene:At.19023 SMR:Q8H2D5 IntAct:Q8H2D5
STRING:Q8H2D5 EnsemblPlants:AT5G44740.2 GeneID:834503
KEGG:ath:AT5G44740 TAIR:At5g44740 InParanoid:Q8H2D5 OMA:CPLRYGT
ProtClustDB:CLSN2680435 Genevestigator:Q8H2D5 Uniprot:Q8H2D5
Length = 672
Score = 174 (66.3 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/131 (38%), Positives = 72/131 (54%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG--- 57
YR+AG EV+++L++ S ERASIDE Y+DLTD E M + + +L + V+
Sbjct: 97 YRSAGSEVVSILAK-SGKCERASIDEVYLDLTDAA-ESMLADAPPESLELIDEEVLKSHI 154
Query: 58 FGPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQF 117
G + D D K V W+ + +D L L+ +IV E+R VL +T+F
Sbjct: 155 LGMNREDGDDFKESVRNWICREDADRRDKL---------LSCGIIIVAELRKQVLKETEF 205
Query: 118 HCSAGIAHNKV 128
CSAGIAHNK+
Sbjct: 206 TCSAGIAHNKM 216
>WB|WBGene00018721 [details] [associations]
symbol:polh-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005634
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:FO080224 EMBL:AB244413 PIR:A88395
RefSeq:NP_497480.2 UniGene:Cel.10441 ProteinModelPortal:G5EFY1
SMR:G5EFY1 EnsemblMetazoa:F53A3.2 GeneID:175337
KEGG:cel:CELE_F53A3.2 CTD:175337 WormBase:F53A3.2 OMA:GVGNNKM
NextBio:887718 Uniprot:G5EFY1
Length = 584
Score = 149 (57.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 40/133 (30%), Positives = 69/133 (51%)
Query: 1 YRNAGREVIAVLSEFSN--IVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGF 58
YR+A EV VL+ + + I+E+AS+DEA++DL+ +++++ + + + +
Sbjct: 91 YRDASAEVFRVLNNYDSQIIIEKASVDEAFLDLSAYTNQKLQELRENEGLEEFLQAAITY 150
Query: 59 GPDNNDEDARKAGVMEWLGQVYSDTDTSLMENTEDFQE---LAIAGVIVEEIRAAVLSKT 115
P + E L + D +EN + E L IA V VE+IR + +T
Sbjct: 151 LPTTHLATGEDVKENEHLRE---DVLLEYIENARNCTENLLLLIAAVTVEQIRQQIHEET 207
Query: 116 QFHCSAGIAHNKV 128
QF CSAG+ +NK+
Sbjct: 208 QFFCSAGVGNNKM 220
>UNIPROTKB|J3KRG0 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000580880 Uniprot:J3KRG0
Length = 145
Score = 95 (38.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG 57
YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 24 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSG 77
Score = 50 (22.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L++ L + I E+R A+ ++ AG+A NK+
Sbjct: 77 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKL 126
>UNIPROTKB|I3LUT8 [details] [associations]
symbol:LOC100737500 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 GeneTree:ENSGT00530000062942
EMBL:CU928880 Ensembl:ENSSSCT00000029503 OMA:FRRSEAK Uniprot:I3LUT8
Length = 191
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI-GH-IAASQLSNTFVVGF 58
YR A EV+ V+S F+ ++ERASIDEA++DLT+ V ER++ + G ++A L T++ GF
Sbjct: 92 YREASAEVMEVMSRFA-MIERASIDEAFVDLTNAVRERLQKLQGQPVSADLLPTTYIEGF 150
>UNIPROTKB|J3QR36 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000577612 Uniprot:J3QR36
Length = 195
Score = 95 (38.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG 57
YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 84 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSG 137
Score = 50 (22.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L++ L + I E+R A+ ++ AG+A NK+
Sbjct: 137 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKL 186
>UNIPROTKB|J3KTN3 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000583136 Uniprot:J3KTN3
Length = 222
Score = 95 (38.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG 57
YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 59 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSG 112
Score = 50 (22.7 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L++ L + I E+R A+ ++ AG+A NK+
Sbjct: 112 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKL 161
>UNIPROTKB|Q5JTF2 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006301 GO:GO:0003887 GO:GO:0006290 EMBL:AL353602
EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181 HOGENOM:HOG000115605
IPI:IPI00646080 SMR:Q5JTF2 STRING:Q5JTF2 Ensembl:ENST00000443535
Uniprot:Q5JTF2
Length = 72
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI 42
YR A EV+ ++S F+ ++ERASIDEAY+DLT V ER++ +
Sbjct: 30 YREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQERLQKL 70
>UNIPROTKB|J3KSW2 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KSW2 Ensembl:ENST00000579434
Uniprot:J3KSW2
Length = 637
Score = 95 (38.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG 57
YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 24 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSG 77
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L++ L + I E+R A+ ++ AG+A NK+
Sbjct: 77 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKL 126
>UNIPROTKB|Q9UNA4 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005654 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AY094607 EMBL:AC093462
EMBL:AF140501 EMBL:AL136670 EMBL:BC032662 EMBL:AF245438
IPI:IPI00296840 RefSeq:NP_009126.2 UniGene:Hs.438533 PDB:1T3N
PDB:1ZET PDB:2ALZ PDB:2DPI PDB:2DPJ PDB:2FLL PDB:2FLN PDB:2FLP
PDB:2KHU PDB:2KHW PDB:2KTF PDB:2L0F PDB:2L0G PDB:3EPG PDB:3EPI
PDB:3G6V PDB:3G6X PDB:3G6Y PDB:3GV5 PDB:3GV7 PDB:3GV8 PDB:3H40
PDB:3H4B PDB:3H4D PDB:3NGD PDB:3OSN PDB:3Q8P PDB:3Q8Q PDB:3Q8R
PDB:3Q8S PDB:4EBC PDB:4EBD PDB:4EBE PDB:4EYH PDB:4EYI PDB:4FS1
PDB:4FS2 PDBsum:1T3N PDBsum:1ZET PDBsum:2ALZ PDBsum:2DPI
PDBsum:2DPJ PDBsum:2FLL PDBsum:2FLN PDBsum:2FLP PDBsum:2KHU
PDBsum:2KHW PDBsum:2KTF PDBsum:2L0F PDBsum:2L0G PDBsum:3EPG
PDBsum:3EPI PDBsum:3G6V PDBsum:3G6X PDBsum:3G6Y PDBsum:3GV5
PDBsum:3GV7 PDBsum:3GV8 PDBsum:3H40 PDBsum:3H4B PDBsum:3H4D
PDBsum:3NGD PDBsum:3OSN PDBsum:3Q8P PDBsum:3Q8Q PDBsum:3Q8R
PDBsum:3Q8S PDBsum:4EBC PDBsum:4EBD PDBsum:4EBE PDBsum:4EYH
PDBsum:4EYI PDBsum:4FS1 PDBsum:4FS2 ProteinModelPortal:Q9UNA4
SMR:Q9UNA4 IntAct:Q9UNA4 MINT:MINT-1189678 STRING:Q9UNA4
PhosphoSite:Q9UNA4 DMDM:59798440 PaxDb:Q9UNA4 PRIDE:Q9UNA4
DNASU:11201 Ensembl:ENST00000579534 GeneID:11201 KEGG:hsa:11201
UCSC:uc002lfj.4 CTD:11201 GeneCards:GC18P051731 H-InvDB:HIX0014457
HGNC:HGNC:9182 HPA:HPA012000 MIM:605252 neXtProt:NX_Q9UNA4
PharmGKB:PA33502 HOGENOM:HOG000234325 HOVERGEN:HBG053634
InParanoid:Q9UNA4 KO:K03510 OMA:VFYELPE OrthoDB:EOG46T310
ChEMBL:CHEMBL5391 ChiTaRS:POLI EvolutionaryTrace:Q9UNA4
GenomeRNAi:11201 NextBio:42637 Bgee:Q9UNA4 CleanEx:HS_POLI
Genevestigator:Q9UNA4 GermOnline:ENSG00000101751 Uniprot:Q9UNA4
Length = 740
Score = 95 (38.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVG 57
YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 127 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSG 180
Score = 50 (22.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L++ L + I E+R A+ ++ AG+A NK+
Sbjct: 180 GHVYNNQSINLLDVLHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKL 229
>UNIPROTKB|G5EH81 [details] [associations]
symbol:MGCH7_ch7g688 "Sister chromatid cohesion protein
Eso1" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0003684 GO:GO:0006281 EMBL:CM000230 EMBL:CM001237
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 RefSeq:XP_003720794.1
EnsemblFungi:MGG_02924T0 GeneID:2682477 KEGG:mgr:MGG_02924
Uniprot:G5EH81
Length = 668
Score = 120 (47.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 1 YRNAGREVIAVLSE----FSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVV 56
YR R ++A++ E VE+ASIDE +IDL+ VH ++ I +L++
Sbjct: 146 YRLQSRTILALIKECLPPHQCKVEKASIDEVFIDLSANVHSKL--IERFP--ELASP--- 198
Query: 57 GFGPDNNDEDAR----KAGVMEWLGQVYSDTDTSLMENTE-DFQELA--IAGVIVEEIRA 109
P D AR ++W + D + E + D+ ++A IA I +IR
Sbjct: 199 ---PPGADAQARLPLPPVSALDWQADALIELDETETETDDPDWDDIALLIASEITRDIRQ 255
Query: 110 AVLSKTQFHCSAGIAHNKV 128
+ ++ ++ CSAG+A NK+
Sbjct: 256 TIFTRLKYTCSAGVAGNKL 274
>UNIPROTKB|F1PDA5 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:AAEX03000145 Ensembl:ENSCAFT00000000242
Uniprot:F1PDA5
Length = 702
Score = 94 (38.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI 42
YR +V +L EFS +VER DE ++DLT++V +R++ +
Sbjct: 88 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL 129
Score = 43 (20.2 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L + L + I E+R A+ ++ AG+A NK+
Sbjct: 141 GHVYNNQYINLHDILHI--RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKL 190
Score = 34 (17.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 93 DFQELAIAGVIVEEIRAAVLSKTQFHCSAGI 123
D QE ++G E+++ H S G+
Sbjct: 499 DIQEEILSGKSGEKVQGKGSLNCPLHASRGV 529
>RGD|1305212 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10116
"Rattus norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1305212 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:CH473971
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201 KO:K03510
OrthoDB:EOG46T310 IPI:IPI00870858 RefSeq:NP_001099607.1
UniGene:Rn.136855 Ensembl:ENSRNOT00000016189 GeneID:291526
KEGG:rno:291526 NextBio:632673 Uniprot:D4A8I8
Length = 732
Score = 90 (36.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSI 42
YR +V +L EFS VER DE ++DLT++V +R++ +
Sbjct: 122 YREMSYKVTELLEEFSPAVERLGFDENFVDLTEMVEKRLQQL 163
Score = 58 (25.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 77 GQVYSDTDTSLMENTEDFQELAIAGVIVEEIRAAVLSKTQFHCSAGIAHNKV 128
G VY++ +L +T LA+ I E+R A+ ++ AG+A NK+
Sbjct: 175 GHVYNNQSVNLHSSTH--VRLAVGSQIAAEMREAMHNQLGLTGCAGVAPNKL 224
>UNIPROTKB|J3KQ09 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KQ09 Ensembl:ENST00000406285
Uniprot:J3KQ09
Length = 661
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDVVHERMKSIGHIAASQLSNTFVVGFGP 60
YR +V +L EFS +VER DE ++DLT++V +R++ + + +LS V G
Sbjct: 127 YREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSGHVY 183
Query: 61 DNNDEDARKAGVMEWLG 77
+N + A +E LG
Sbjct: 184 NNQCIGYKTAKCLEALG 200
>UNIPROTKB|Q83EN5 [details] [associations]
symbol:dinP "DNA polymerase IV" species:227377 "Coxiella
burnetii RSA 493" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003887
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 83 (34.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV-VHE 37
YR G ++ + E++++VE S+DEAY+D++D +H+
Sbjct: 102 YRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCKIHQ 139
Score = 52 (23.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 103 IVEEIRAAVLSKTQFHCSAGIAHNKV 128
I +EIR ++ + SAG+A NK+
Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKL 170
>TIGR_CMR|CBU_0280 [details] [associations]
symbol:CBU_0280 "DNA-damage-inducible protein P"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 83 (34.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 1 YRNAGREVIAVLSEFSNIVERASIDEAYIDLTDV-VHE 37
YR G ++ + E++++VE S+DEAY+D++D +H+
Sbjct: 102 YRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCKIHQ 139
Score = 52 (23.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 103 IVEEIRAAVLSKTQFHCSAGIAHNKV 128
I +EIR ++ + SAG+A NK+
Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKL 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 129 129 0.00091 102 3 11 22 0.41 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 571 (61 KB)
Total size of DFA: 121 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.97u 0.10s 13.07t Elapsed: 00:00:04
Total cpu time: 12.97u 0.10s 13.07t Elapsed: 00:00:04
Start: Thu Aug 15 16:34:50 2013 End: Thu Aug 15 16:34:54 2013