BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16222
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+SFARISD DW ++ VHL G+F+V+RAAW HMKKQ YGR++MT+S SG+ GNFGQ
Sbjct: 123 ILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQ 182
Query: 61 ANYRFLSQQLL 71
ANY LL
Sbjct: 183 ANYSAAKLGLL 193
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 15/104 (14%)
Query: 42 YGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAA 101
+GR+ + +N+G+L + ++ +S + +W ++ VHL G+F+V+RAA
Sbjct: 111 FGRIDVVVNNAGILRD---RSFARISDE--DW----------DIIHRVHLRGSFQVTRAA 155
Query: 102 WPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
W HMKKQ YGR++MT+S SG+ GNFGQANYS G L + S+
Sbjct: 156 WEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSL 199
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+SF+RISD DW ++Q VHL G+F+V+RAAW H KKQNYGR++ TAS SG+ GNFGQ
Sbjct: 102 ILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQ 161
Query: 61 ANYRFLSQQLLEWCETNVL 79
ANY LL T V+
Sbjct: 162 ANYSAAKLGLLGLANTLVI 180
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 15/107 (14%)
Query: 40 QNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSR 99
+GR+ + +N+G+L + ++ +S + +W ++Q VHL G+F+V+R
Sbjct: 88 DTFGRIDVVVNNAGILRD---RSFSRISDE--DW----------DIIQRVHLRGSFQVTR 132
Query: 100 AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSVI 146
AAW H KKQNYGR++ TAS SG+ GNFGQANYS G L + +++
Sbjct: 133 AAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLV 179
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+S + S+ DW LV DVHL G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ
Sbjct: 112 ILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ 171
Query: 61 ANYRFLSQQLLEWCETNVLNVEQQ--LVQDVHLTGAFRVSRAAWPHM 105
NY L+ T + + L + T A R++ P +
Sbjct: 172 VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGILPDI 218
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 48/61 (78%)
Query: 85 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
LV DVHL G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ NY+ G + + +
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANT 187
Query: 145 V 145
V
Sbjct: 188 V 188
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 92.4 bits (228), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD S ++++ D++LV DVHL GAF V++AAWP+ +KQ YGR+V T+S +GL GNFGQ
Sbjct: 101 ILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ 160
Query: 61 ANYRFLSQQLLEWCET 76
ANY LL + ET
Sbjct: 161 ANYASAKSALLGFAET 176
Score = 82.8 bits (203), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+SFA++S +W VQ VHL G F +SR AWP+ ++ +GR++ S SG+ GNFGQ
Sbjct: 405 ILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ 464
Query: 61 ANY 63
ANY
Sbjct: 465 ANY 467
Score = 75.9 bits (185), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 15/93 (16%)
Query: 40 QNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSR 99
+N+G + + +N+G+L + A+ + ++++ + +LV DVHL GAF V++
Sbjct: 87 KNFGTVHVIINNAGILRD---ASMKKMTEK------------DYKLVIDVHLNGAFAVTK 131
Query: 100 AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
AAWP+ +KQ YGR+V T+S +GL GNFGQANY+
Sbjct: 132 AAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA 164
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 15/104 (14%)
Query: 42 YGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAA 101
YG + + +N+G+L + ++ +S+Q EW VQ VHL G F +SR A
Sbjct: 393 YGTIDILVNNAGILRD---RSFAKMSKQ--EW----------DSVQQVHLIGTFNLSRLA 437
Query: 102 WPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
WP+ ++ +GR++ S SG+ GNFGQANYS G L + +++
Sbjct: 438 WPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTM 481
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ D DW+ V + +L+ FR +R A M K +GR+V S G+LGN GQ
Sbjct: 90 ITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQ 149
Query: 61 ANY 63
ANY
Sbjct: 150 ANY 152
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIER 143
+ V + +L+ FR +R A M K +GR+V S G+LGN GQANY G + R
Sbjct: 105 EAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTR 164
Query: 144 SV 145
+V
Sbjct: 165 AV 166
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK F R+S DW+ V V+LTG F V++ + M KQ +GR+V +S G GN GQ
Sbjct: 95 ITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ 154
Query: 61 ANYRFLSQQLLEWCET 76
NY L+ + ++
Sbjct: 155 VNYSTTKAGLIGFTKS 170
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 65 FLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
FL LL+W E V V+LTG F V++ + M KQ +GR+V +S G G
Sbjct: 101 FLRMSLLDWEE----------VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG 150
Query: 125 NFGQANYSFLAGGALKIERSV 145
N GQ NYS G + +S+
Sbjct: 151 NVGQVNYSTTKAGLIGFTKSL 171
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + W V D++LTG F ++AA M K+ GR++ AS GL+GN GQ
Sbjct: 89 ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ 148
Query: 61 ANYRFLSQQLLEWCET 76
ANY ++ + +T
Sbjct: 149 ANYAAAKAGVIGFSKT 164
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V D++LTG F ++AA M K+ GR++ AS GL+GN GQANY+ G + ++
Sbjct: 106 VIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKT 164
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ DWQ V D++L G F SRAA M KQ GR++ AS G +GN GQ
Sbjct: 116 ITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ 175
Query: 61 ANYRFLSQQLLEWCET 76
ANY ++ +T
Sbjct: 176 ANYSAAKAGVIGLTKT 191
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIER 143
Q V D++L G F SRAA M KQ GR++ AS G +GN GQANYS G + + +
Sbjct: 131 QSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTK 190
Query: 144 SV 145
+V
Sbjct: 191 TV 192
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ D +W + + +L+ FR+S+A M K+ +GR++ S G +GN GQ
Sbjct: 89 ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ 148
Query: 61 ANYRFLSQQLLEWCET 76
ANY L+ + ++
Sbjct: 149 ANYAAAKAGLIGFSKS 164
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +L+ FR+S+A M K+ +GR++ S G +GN GQANY+ G + +S+
Sbjct: 106 IIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSL 165
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFG 59
I RD F R+SD DW V V+LT F ++R P M+++N GR++ S G+ GN G
Sbjct: 91 ITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRN-GRIINITSIVGVTGNPG 149
Query: 60 QANY 63
QANY
Sbjct: 150 QANY 153
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 86 VQDVHLTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V V+LT F ++R P M+++N GR++ S G+ GN GQANY G + +S
Sbjct: 108 VLTVNLTSVFNLTRELTHPMMRRRN-GRIINITSIVGVTGNPGQANYCASKAGLIGFSKS 166
Query: 145 V 145
+
Sbjct: 167 L 167
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFG 59
I RD F R+SD DW V V+LT F ++R P M+++N GR++ S G+ GN G
Sbjct: 94 ITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRN-GRIINITSIVGVTGNPG 152
Query: 60 QANY 63
QANY
Sbjct: 153 QANY 156
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 86 VQDVHLTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V V+LT F ++R P M+++N GR++ S G+ GN GQANY G + +S
Sbjct: 111 VLTVNLTSVFNLTRELTHPMMRRRN-GRIINITSIVGVTGNPGQANYCASKAGLIGFSKS 169
Query: 145 V 145
+
Sbjct: 170 L 170
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ D +W + + +L+ FR+S+A M K+ +GR++ S G +GN GQ
Sbjct: 89 ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ 148
Query: 61 ANYRFLSQQLLEWCET 76
AN+ L+ + ++
Sbjct: 149 ANFAAAKAGLIGFSKS 164
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +L+ FR+S+A M K+ +GR++ S G +GN GQAN++ G + +S+
Sbjct: 106 IIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSL 165
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W + + +LT FR+S+A M K+ GR++ S G +GN GQ
Sbjct: 96 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155
Query: 61 ANY 63
ANY
Sbjct: 156 ANY 158
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +LT FR+S+A M K+ GR++ S G +GN GQANY+ G + +S+
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W + + +LT FR+S+A M K+ GR++ S G +GN GQ
Sbjct: 96 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155
Query: 61 ANY 63
ANY
Sbjct: 156 ANY 158
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +LT FR+S+A M K+ GR++ S G +GN GQANY+ G + +S+
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ +D+ R+S+ D+ V + +LTG FRV + A M + GR+V+ +S GLLG+ GQ
Sbjct: 97 VTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQ 156
Query: 61 ANY 63
ANY
Sbjct: 157 ANY 159
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
V + +LTG FRV + A M + GR+V+ +S GLLG+ GQANY+ G + RS+
Sbjct: 114 VVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W + + +LT FR+S+A M K+ GR++ S G +GN GQ
Sbjct: 96 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155
Query: 61 ANY 63
ANY
Sbjct: 156 ANY 158
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +LT FR+S+A M K+ GR++ S G +GN GQANY+ G + +S+
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W + + +LT FR+S+A M K+ GR++ S G +GN GQ
Sbjct: 96 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155
Query: 61 ANY 63
ANY
Sbjct: 156 ANY 158
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +LT FR+S+A M K+ GR++ S G +GN GQANY+ G + +S+
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD + DW+LV V+LTG+F V++AA +++N G +V+TAS LGN GQ
Sbjct: 87 ITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRV-YLGNLGQ 145
Query: 61 ANY 63
ANY
Sbjct: 146 ANY 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIER 143
+LV V+LTG+F V++AA +++N G +V+TAS LGN GQANY+ G + + R
Sbjct: 102 ELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTR 160
Query: 144 SV 145
++
Sbjct: 161 TL 162
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD F R+ D DW V V+LT A ++R M ++ YGR++ S G++GN GQ
Sbjct: 111 ITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ 170
Query: 61 ANY 63
NY
Sbjct: 171 TNY 173
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
V+LT A ++R M ++ YGR++ S G++GN GQ NY G + +++
Sbjct: 131 VNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W + + +LT FR+S+A M K+ GR++ S G +GN GQ
Sbjct: 96 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155
Query: 61 ANY 63
AN+
Sbjct: 156 ANF 158
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +LT FR+S+A M K+ GR++ S G +GN GQAN++ G + +S+
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSM 172
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD F +++ DWQ V D +LT F V++ M ++ +GR++ +S +G G FGQ
Sbjct: 101 ITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ 160
Query: 61 ANY 63
NY
Sbjct: 161 TNY 163
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V D +LT F V++ M ++ +GR++ +S +G G FGQ NYS G
Sbjct: 116 QAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG 169
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD ++S+ DW V + +L A+ ++A M KQ G+++ S +G++GN GQ
Sbjct: 93 ITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ 152
Query: 61 ANYRFLSQQLLEWCET 76
ANY L+ + ++
Sbjct: 153 ANYAASKAGLIGFTKS 168
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
V + +L A+ ++A M KQ G+++ S +G++GN GQANY+ G + +S+
Sbjct: 110 VLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSI 169
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ +D R+ + +W V + +L G F ++A M +Q +GR+V AS G+ GN GQ
Sbjct: 92 VTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ 151
Query: 61 ANY 63
ANY
Sbjct: 152 ANY 154
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V + +L G F ++A M +Q +GR+V AS G+ GN GQANY G + + ++
Sbjct: 109 VINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKT 167
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W V D +L G F + A P M +Q G ++ +S G +GN GQ
Sbjct: 98 ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ 157
Query: 61 ANY 63
ANY
Sbjct: 158 ANY 160
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V D +L G F + A P M +Q G ++ +S G +GN GQANY G + + +S
Sbjct: 115 VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKS 173
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I D R+ D D+ V D++L F ++R A M ++ YGR++ +S G+ GN GQ
Sbjct: 94 ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ 153
Query: 61 ANY 63
ANY
Sbjct: 154 ANY 156
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
V D++L F ++R A M ++ YGR++ +S G+ GN GQANY G + + +S+
Sbjct: 111 VIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSL 170
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I +D+ R+ D +W V D +L FR+SRA M K GR+V S G GN GQ
Sbjct: 115 ITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ 174
Query: 61 ANY 63
NY
Sbjct: 175 VNY 177
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
V D +L FR+SRA M K GR+V S G GN GQ NY+ G + R++
Sbjct: 132 VIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRAL 191
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 4 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
D R+++ ++ V + +LTGAFRV++ A M++ +GR++ AS SGL G QANY
Sbjct: 114 DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGNQANY 173
Query: 64 RFLSQQLL--------EWCETNVL-NVEQQLVQDVHLTGAF--RVSRAAWPHMKKQNYGR 112
++ E + NV NV D +T A R+ + A + + G
Sbjct: 174 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVG- 232
Query: 113 LVMTASNSGLLGNFGQANYSFLAGGALKIE 142
A +G++ + S+++G + ++
Sbjct: 233 --TPAEVAGVVSFLASEDASYISGAVIPVD 260
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 54 LLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRL 113
L+ N G + FL + E E V+N +LTGAFRV++ A M++ +GR+
Sbjct: 105 LVSNAGLSADAFLMRMTEEKFE-KVINA--------NLTGAFRVAQRASRSMQRNKFGRM 155
Query: 114 VMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ AS SGL G QANY+ G + + RS+
Sbjct: 156 IFIASVSGLWGIGNQANYAASKAGVIGMARSI 187
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R + +W + + +LT FR+S+A K+ GR++ S G GN GQ
Sbjct: 93 ITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQ 152
Query: 61 ANY 63
ANY
Sbjct: 153 ANY 155
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
+ + +LT FR+S+A K+ GR++ S G GN GQANY+ G + +S
Sbjct: 110 IXETNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKS 168
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD F R+ + +W+ V +L F +++ M YGR++ +S GL GN GQ
Sbjct: 131 ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ 190
Query: 61 ANY 63
ANY
Sbjct: 191 ANY 193
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 80 NVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGAL 139
N E + V +L F +++ M YGR++ +S GL GN GQANYS G +
Sbjct: 142 NDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVI 201
Query: 140 KIERSV 145
+S+
Sbjct: 202 GFTKSL 207
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLS 67
A +SD W+ V V+L AF SRA P M KQ G +V TAS +G+ G F A Y
Sbjct: 102 AEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161
Query: 68 QQLL 71
L+
Sbjct: 162 HGLI 165
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 76 TNVLNVEQQL---VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
T V V +L V V+L AF SRA P M KQ G +V TAS +G+ G F A Y+
Sbjct: 99 TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYT 158
Query: 133 FLAGGALKIERSV 145
G + + RS+
Sbjct: 159 VAKHGLIGLTRSI 171
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ D +W V + +L +R+S+A M K +GR++ S G +GN GQ
Sbjct: 114 ITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQ 173
Query: 61 ANY 63
NY
Sbjct: 174 TNY 176
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +L +R+S+A M K +GR++ S G +GN GQ NY+
Sbjct: 131 VVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYA 177
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 6 SFARISD---TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+FA + D D+ V +++TGAF V +A M QNYGR+V TAS +G+ G A
Sbjct: 97 AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAA 156
Query: 63 YRFLSQQLLEWCETNVLNV 81
Y ++ ET L++
Sbjct: 157 YGTSKGAIIALTETAALDL 175
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V +++TGAF V +A M QNYGR+V TAS +G+ G A Y G + + +
Sbjct: 112 VLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTET 170
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 4 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
D R+++ ++ V + +LTGAFRV++ A M++ +GR++ S SGL G QANY
Sbjct: 94 DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANY 153
Query: 64 RFLSQQLL--------EWCETNVL-NVEQQLVQDVHLTGAF--RVSRAAWPHMKKQNYGR 112
++ E + NV NV D +T A R+ + A + + G
Sbjct: 154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVG- 212
Query: 113 LVMTASNSGLLGNFGQANYSFLAGGALKIE 142
A +G++ + S+++G + ++
Sbjct: 213 --TPAEVAGVVSFLASEDASYISGAVIPVD 240
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 54 LLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRL 113
L+ N G + FL + E E V+N +LTGAFRV++ A M++ +GR+
Sbjct: 85 LVSNAGLSADAFLMRMTEEKFE-KVINA--------NLTGAFRVAQRASRSMQRNKFGRM 135
Query: 114 VMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ S SGL G QANY+ G + + RS+
Sbjct: 136 IFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD +F +++ DW V L F V++ M ++ +GR+V S +G G FGQ
Sbjct: 113 ITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ 172
Query: 61 ANY 63
ANY
Sbjct: 173 ANY 175
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V L F V++ M ++ +GR+V S +G G FGQANY+
Sbjct: 130 VMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYA 176
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R + +W V D +L G F + A P +Q G ++ +S G +GN GQ
Sbjct: 92 ITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQ 151
Query: 61 ANY 63
ANY
Sbjct: 152 ANY 154
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V D +L G F + A P +Q G ++ +S G +GN GQANY G + + +S
Sbjct: 109 VIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKS 167
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R S+ +WQ V + +L+ FR S+ K+ +GR++ S G GN GQ
Sbjct: 92 ITRDNLXXRXSEDEWQSVINTNLSSIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQ 151
Query: 61 ANY 63
NY
Sbjct: 152 TNY 154
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 82 EQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKI 141
E Q V + +L+ FR S+ K+ +GR++ S G GN GQ NY G +
Sbjct: 105 EWQSVINTNLSSIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGF 164
Query: 142 ERSV 145
+S+
Sbjct: 165 SKSL 168
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 7 FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ W V +LTG F A P M K+NYGR+V +S G NF QA+Y
Sbjct: 115 LPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASY 171
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 90 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
+LTG F A P M K+NYGR+V +S G NF QA+Y
Sbjct: 130 NLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASY 171
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 4 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
D R+++ ++ V + +LTGAFRV++ A M++ +GR++ S SG G QANY
Sbjct: 94 DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANY 153
Query: 64 RFLSQQLL--------EWCETNVL-NVEQQLVQDVHLTGAF--RVSRAAWPHMKKQNYGR 112
++ E + NV NV D +T A R+ + A + + G
Sbjct: 154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVG- 212
Query: 113 LVMTASNSGLLGNFGQANYSFLAGGALKIE 142
A +G++ + S+++G + ++
Sbjct: 213 --TPAEVAGVVSFLASEDASYISGAVIPVD 240
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 54 LLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRL 113
L+ N G + FL + E E V+N +LTGAFRV++ A M++ +GR+
Sbjct: 85 LVSNAGLSADAFLMRMTEEKFE-KVINA--------NLTGAFRVAQRASRSMQRNKFGRM 135
Query: 114 VMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ S SG G QANY+ G + + RS+
Sbjct: 136 IFIGSVSGSWGIGNQANYAASKAGVIGMARSI 167
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++RDK ++ D+ V D +LT AF R A M K +G +V AS G GN GQ
Sbjct: 117 VVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ 176
Query: 61 ANY 63
NY
Sbjct: 177 TNY 179
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V D +LT AF R A M K +G +V AS G GN GQ NYS GG + + +S
Sbjct: 134 VIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKS 192
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWC 74
W + ++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y ++ +
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFT 166
Query: 75 ETNVLNVEQQ 84
+ L Q
Sbjct: 167 KVTALETAGQ 176
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAY 155
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWC 74
W + ++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y ++ +
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFT 166
Query: 75 ETNVLNVEQQ 84
+ L Q
Sbjct: 167 KVTALETAGQ 176
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAY 155
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWC 74
W + ++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y ++ +
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFT 166
Query: 75 ETNVLNVEQQ 84
+ L Q
Sbjct: 167 KVTALETAGQ 176
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAY 155
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAA---WPHMKKQNY---GRLVMTASNSGL 54
I+RD+ A S+ ++ V VHL G F R A W + K GR++ T+S +GL
Sbjct: 124 IVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183
Query: 55 LGNFGQANY 63
G+ GQ NY
Sbjct: 184 QGSVGQGNY 192
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 77 NVLNVEQQLVQDVHLTGAFRVSRAA---WPHMKKQNY---GRLVMTASNSGLLGNFGQAN 130
N E V VHL G F R A W + K GR++ T+S +GL G+ GQ N
Sbjct: 132 NTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGN 191
Query: 131 YS 132
YS
Sbjct: 192 YS 193
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAA-WPHMKKQNYGRLVMTASNSGLLGNFG 59
I RD +F +S+ DW V +L + V + P + + GR++ +S SG++GN G
Sbjct: 114 IARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG 173
Query: 60 QANY 63
Q NY
Sbjct: 174 QVNY 177
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 103 PHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGG------ALKIE 142
P + + GR++ +S SG++GN GQ NYS G AL IE
Sbjct: 149 PMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIE 194
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ D +W + + +L+ FR+S+A M K+ +GR++ GQ
Sbjct: 89 ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIG---------GQ 139
Query: 61 ANYRFLSQQLLEWCET 76
ANY L+ + ++
Sbjct: 140 ANYAAAKAGLIGFSKS 155
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
+ + +L+ FR+S+A M K+ +GR++ GQANY+ G + +S+
Sbjct: 106 IIETNLSSVFRLSKAVMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSL 156
>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum
Length = 267
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANYSFLAGGALKIER 143
V V L G F ++A H K++ G LV+TAS SG + NF Q +Y+ G + + R
Sbjct: 128 VVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMAR 187
Query: 144 SV 145
S+
Sbjct: 188 SL 189
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRF 65
W V V L G F ++A H K++ G LV+TAS SG + NF Q +
Sbjct: 125 WNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSY 175
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
W + ++L+ F +R A P M+ +N+GR++ AS GL+G+ G+A Y
Sbjct: 103 WDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAY 151
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
++L+ F +R A P M+ +N+GR++ AS GL+G+ G+A Y G + + + V
Sbjct: 109 LNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVV 165
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYRFLS 67
++D W V V+LTG +R RA P M + N G +V+ +S++GL G +Y
Sbjct: 123 ELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASK 182
Query: 68 QQLLEWCETNVLNVE 82
L TN L +E
Sbjct: 183 HGLTAL--TNTLAIE 195
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 58 FGQANYRFLSQQLLEWCETNVLNVEQ-QLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVM 115
FG+ + + +L W L EQ V V+LTG +R RA P M + N G +V+
Sbjct: 103 FGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVV 162
Query: 116 TASNSGLLGNFGQANYS 132
+S++GL G +YS
Sbjct: 163 VSSSAGLKATPGNGHYS 179
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + D W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 282 ITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ 341
Query: 61 ANY 63
NY
Sbjct: 342 TNY 344
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
V+L R++ + GR++ +S +G+ GN GQ NY+ G + I +++
Sbjct: 302 VNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 358
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + D W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 290 ITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ 349
Query: 61 ANY 63
NY
Sbjct: 350 TNY 352
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 111 GRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
GR++ +S +G+ GN GQ NY+ G + I +++
Sbjct: 332 GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 366
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + D W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 298 ITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ 357
Query: 61 ANY 63
NY
Sbjct: 358 TNY 360
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 111 GRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
GR++ +S +G+ GN GQ NY+ G + I +++
Sbjct: 340 GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 374
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + D W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 306 ITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ 365
Query: 61 ANY 63
NY
Sbjct: 366 TNY 368
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 111 GRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
GR++ +S +G+ GN GQ NY+ G + I +++
Sbjct: 348 GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 382
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + D W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 319 ITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ 378
Query: 61 ANY 63
NY
Sbjct: 379 TNY 381
Score = 28.5 bits (62), Expect = 1.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 111 GRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
GR++ +S +G+ GN GQ NY+ G + I +++
Sbjct: 361 GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 395
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 40 QNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLN---VEQ-QLVQDVHLTGAF 95
+ +G + + +N+G+ GN E VL+ VEQ V V++ G F
Sbjct: 76 EQFGAIDVLVNNAGITGN----------------SEAGVLHTTPVEQFDKVMAVNVRGIF 119
Query: 96 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
RA PHM Q G +V AS + L+ G++ Y+ G L++ +SV
Sbjct: 120 LGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSV 169
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
V V++ G F RA PHM Q G +V AS + L+ G++ Y
Sbjct: 110 VMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAY 155
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
I +D+ +S+ DW V V+L G F V++AA + G ++ +S G +GN G
Sbjct: 102 ITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG 161
Query: 60 QANY 63
Q NY
Sbjct: 162 QTNY 165
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
V+L G F V++AA + G ++ +S G +GN GQ NY+ G + + ++
Sbjct: 122 VNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQT 178
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
K + DWQ V D +LT AF + R A M + YG++V S + L A Y
Sbjct: 117 KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPY 175
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIER 143
Q V D +LT AF + R A M + YG++V S + L A Y+ GG + R
Sbjct: 128 QRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTR 187
Query: 144 SV 145
++
Sbjct: 188 AM 189
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYRFLSQQLLE 72
++Q +QD ++TG F ++AA M Q G ++ TAS SG + N + QQ+
Sbjct: 132 EFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN--------IPQQVSH 183
Query: 73 WCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQN 109
+C + VHLT A V A PH + N
Sbjct: 184 YCTSKAAV--------VHLTKAMAVELA--PHQIRVN 210
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 82 EQQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQ 128
E Q +QD ++TG F ++AA M Q G ++ TAS SG + N Q
Sbjct: 132 EFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ 179
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 13 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
T+WQ + DV+LTG F RA MK+ G ++ +S GL G Y
Sbjct: 103 TEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGY 153
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 42 YGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAA 101
+G L + +N+G+L N G L EW Q + DV+LTG F RA
Sbjct: 79 FGGLHVLVNNAGIL-NIGTIE----DYALTEW----------QRILDVNLTGVFLGIRAV 123
Query: 102 WPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
MK+ G ++ +S GL G Y+
Sbjct: 124 VKPMKEAGRGSIINISSIEGLAGTVACHGYT 154
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
W + ++L+ F + AA P M+KQ +GR++ AS GL+ + ++ Y
Sbjct: 107 WNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAY 155
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
++L+ F + AA P M+KQ +GR++ AS GL+ + ++ Y
Sbjct: 113 LNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAY 155
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWC 74
W + V+L+ +F R A P KK+ +GR++ AS GL+ + ++ Y +
Sbjct: 128 WDRIIAVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLT 187
Query: 75 ETNVLNVEQQLV 86
+T L V + V
Sbjct: 188 KTVALEVAESGV 199
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
V+L+ +F R A P KK+ +GR++ AS GL+ + ++ Y
Sbjct: 134 VNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAY 176
>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221q Complexed With Estradiol
Length = 327
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDV|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
Length = 327
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
C-Terminal Deletion Mutant Complexed With Estradiol And
Nadp+
Length = 289
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With 17- Beta-Estradiol
pdb|1FDT|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With Estradiol And Nadp+
pdb|3KLM|X Chain X, 17beta-Hsd1 In Complex With Dht
Length = 327
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1EQU|B Chain B, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1DHT|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dihydrotestosterone
pdb|3DHE|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dehydroepiandrosterone
pdb|1I5R|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Em1745 Complex
pdb|1JTV|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
Type 1 Complexed With Testosterone
pdb|1QYV|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Complex With Nadp
pdb|1QYW|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Comlex With
Androstanedione And Nadp
pdb|1QYX|A Chain A, Crystal Structure Of Human Estrogenic
17beta-Hydroxysteroid Dehydrogenase Complex With
Androstenedione And Nadp
pdb|1BHS|A Chain A, Human Estrogenic 17beta-hydroxysteroid Dehydrogenase
pdb|3DEY|X Chain X, Crystal Structure Of 17beta-Hsd1 With Dht In Normal And
Reverse Orientation.
pdb|3HB4|X Chain X, 17beta-Hydroxysteroid Dehydrogenase Type1 Complexed With
E2b
pdb|3HB5|X Chain X, Binary And Ternary Crystal Structures Of A Novel Inhibitor
Of 17 Beta-Hsd Type 1: A Lead Compound For Breast Cancer
Therapy
pdb|3KLP|X Chain X, 17beta-Hsd1 In Complex With A-Diol
pdb|3KM0|A Chain A, 17betahsd1 In Complex With 3beta-Diol
pdb|3KM0|B Chain B, 17betahsd1 In Complex With 3beta-Diol
Length = 327
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
V DV++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 12 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG 56
D W V DV+LTG + + A P + KQ G +V+ +S++GL G
Sbjct: 119 DDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG 164
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG 124
V DV+LTG + + A P + KQ G +V+ +S++GL G
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG 164
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
+ DV+LTG F V+RA M+ GR++ ASN+ G A Y GG + R+
Sbjct: 107 IIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRA 166
Query: 145 V 145
+
Sbjct: 167 L 167
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANY 63
W+ + DV+LTG F V+RA M+ GR++ ASN+ G A Y
Sbjct: 104 WRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAY 153
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANY 63
R+ W+ + DV+L GA+ +R A PH M + G +V T+S GL G NY
Sbjct: 136 RMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNY 191
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANY 131
DV+L GA+ +R A PH M + G +V T+S GL G NY
Sbjct: 147 DVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNY 191
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 35.0 bits (79), Expect = 0.013, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + + W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 298 ITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ 357
Query: 61 ANY 63
NY
Sbjct: 358 TNY 360
Score = 27.7 bits (60), Expect = 2.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 111 GRLVMTASNSGLLGNFGQANYSFLAGGALKIERSV 145
GR++ +S +G+ GN GQ NY+ G + + ++
Sbjct: 340 GRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEAL 374
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
W+ V V+LTG+F V+R A +++ G LV+T S +G LG FG A+Y
Sbjct: 104 WEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVAG-LGAFGLAHY 149
>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase (Nadph) From Sinorhizobium Meliloti
Length = 324
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 7 FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFL 66
FAR +D D + ++ + + V RA + + GR+ + N+G FG A F
Sbjct: 53 FARDNDVDLRTLE-LDVQSQVSVDRAIDQIIGED--GRIDVLIHNAGHX-VFGPAEA-FT 107
Query: 67 SQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLV 114
+Q E + NVL+ + RV+RAA PH ++Q +G L+
Sbjct: 108 PEQFAELYDINVLSTQ-------------RVNRAALPHXRRQKHGLLI 142
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAW--PHMKKQNYGRLVMTASNSGLLGNFGQANY 63
A + D W V D +LTG FRV+R M++ +GR+V AS G G A Y
Sbjct: 118 ADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPY 175
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 86 VQDVHLTGAFRVSRAAW--PHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIER 143
V D +LTG FRV+R M++ +GR+V AS G G A Y+ G + +
Sbjct: 128 VLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTK 187
Query: 144 SV 145
SV
Sbjct: 188 SV 189
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFG 59
I+ A+++ DW+ V D+ L G+ A P + +Q G + TAS +GL+ N G
Sbjct: 118 IVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG 177
Query: 60 QANYRFLSQQLLEWCET 76
Y ++ ET
Sbjct: 178 LGTYGVAKYGVVGLAET 194
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANY 131
V D+ L G+ A P + +Q G + TAS +GL+ N G Y
Sbjct: 135 VIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTY 181
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS 50
K +S +W+ V +HL AF +++AA PHM + +GR++ S
Sbjct: 84 KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGS 129
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 89 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKI 141
+HL AF +++AA PHM + +GR++ S + +F AGG + I
Sbjct: 100 LHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVT-----------TFTAGGPVPI 141
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 13 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
T+WQ + DV+LTG F RA K+ G ++ +S GL G Y
Sbjct: 103 TEWQRILDVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGY 153
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 42 YGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAA 101
+G L + +N+G+L N G L EW Q + DV+LTG F RA
Sbjct: 79 FGGLHVLVNNAGIL-NIGTIE----DYALTEW----------QRILDVNLTGVFLGIRAV 123
Query: 102 WPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
K+ G ++ +S GL G Y+
Sbjct: 124 VKPXKEAGRGSIINISSIEGLAGTVACHGYT 154
>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed
17-beta- Estradiol
Length = 327
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V +V++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLEVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 124
V +V++ G R+ +A P MK++ GR+++T S GL+G
Sbjct: 110 VLEVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 26/60 (43%)
Query: 11 SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQL 70
+D DW L V++ FR+ RAA P G +V AS GL G A Y L
Sbjct: 114 TDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAAL 173
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 17/119 (14%)
Query: 17 LVQDVHLTGAFRVSRAA--WPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWC 74
+ D+HL G R + A P GRL + +N+G++ + R +W
Sbjct: 65 IAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVI-----SRGRITETTDADWS 119
Query: 75 ETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSF 133
+ +NVE FR+ RAA P G +V AS GL G A Y
Sbjct: 120 LSLGVNVEAP----------FRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCL 168
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYR 64
K ++ +W+LV D +LTGAF R A P + ++ G +V S +G G A Y
Sbjct: 92 KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYN 151
Query: 65 FLSQQLLEWCETNVLNVEQQLVQDVHL 91
LL +L++ + V+ V++
Sbjct: 152 ASKFGLLGLAGAAMLDLREANVRVVNV 178
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANY 63
++D W + +L GA+ RA P M ++ G ++ +S GL G GQ++Y
Sbjct: 154 LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHY 208
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 90 HLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYS 132
+L GA+ RA P M ++ G ++ +S GL G GQ++Y+
Sbjct: 166 NLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYA 209
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I+R ++ ++ V D+ L F VS+A P M K+ +G+++ S LG
Sbjct: 121 IIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV 180
Query: 61 ANY-------RFLSQQLL-EWCETNV 78
+ Y + L++ + E+ E N+
Sbjct: 181 SAYAAAKGGLKMLTKNIASEYGEANI 206
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGG 137
V D+ L F VS+A P M K+ +G+++ S LG + Y+ GG
Sbjct: 138 VIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGG 189
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGL 54
+ + S+ DW + D++L G ++ +A PHM G +++T+S GL
Sbjct: 120 TLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL 169
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYSFLAGGALKIERS 144
+ DV+LTG F V+RA + GR++ ASN+ G A Y GG + R+
Sbjct: 107 IIDVNLTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRA 166
Query: 145 V 145
+
Sbjct: 167 L 167
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANY 63
W+ + DV+LTG F V+RA + GR++ ASN+ G A Y
Sbjct: 104 WRKIIDVNLTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAY 153
>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
pdb|1UAY|B Chain B, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
Length = 242
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 86 VQDVHLTGAFRVSR-AAW-----PHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGAL 139
V +V+L G F V R AAW P + G +V TAS + G GQA Y+ GG +
Sbjct: 97 VLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVV 156
Query: 140 KI 141
+
Sbjct: 157 AL 158
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 15 WQLVQDVHLTGAFRVSR-AAW-----PHMKKQNYGRLVMTASNSGLLGNFGQANY 63
++ V +V+L G F V R AAW P + G +V TAS + G GQA Y
Sbjct: 94 FRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 49 ASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQ 108
S GL+ N G + FL + +E + V +++LTG F + P MK
Sbjct: 78 GSVDGLVNNAGISTGMFLETESVERF---------RKVVEINLTGVFIGMKTVIPAMKDA 128
Query: 109 NYGRLVMTASNSGLLG 124
G +V +S +GL+G
Sbjct: 129 GGGSIVNISSAAGLMG 144
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V +++LTG F + P MK G +V +S +GL+G
Sbjct: 106 VVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG 144
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 49 ASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQ 108
S GL+ N G + FL + +E + V +++LTG F + P MK
Sbjct: 78 GSVDGLVNNAGISTGMFLETESVERF---------RKVVEINLTGVFIGMKTVIPAMKDA 128
Query: 109 NYGRLVMTASNSGLLG 124
G +V +S +GL+G
Sbjct: 129 GGGSIVNISSAAGLMG 144
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 18 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
V +++LTG F + P MK G +V +S +GL+G
Sbjct: 106 VVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG 144
>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3TL3|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 257
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKK--------QNYGRLVMTASNSGLLGNFGQANYSFLAGG 137
+ D++L G+F V R A + K + G ++ TAS + G GQA YS GG
Sbjct: 110 IVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGG 169
Query: 138 AL 139
+
Sbjct: 170 VV 171
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKK--------QNYGRLVMTASNSGLLGNFGQANY 63
++ + D++L G+F V R A + K + G ++ TAS + G GQA Y
Sbjct: 107 FRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAY 163
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG 43
K + +WQ V D +LT AF VSR+A M +N G
Sbjct: 100 KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG 138
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 100 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 157
>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
Length = 259
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG 53
++ K+ A + + W V DV+LT F ++ A P M K G +V +S +G
Sbjct: 97 LIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG--GAIVTFSSQAG 147
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 120 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 177
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILR + ++S DWQ V++ GAF + + ++Q G +V AS++ G
Sbjct: 84 ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGM 143
Query: 61 ANY 63
+ Y
Sbjct: 144 SAY 146
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 116 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 173
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
+ A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 118 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 177
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 120 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 177
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 120 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 177
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 116 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY 173
>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
Length = 286
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSG 53
+ +I D WQ + D++LTG + +A PH + G +V+T+S G
Sbjct: 119 RKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGG 168
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 40 QNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSR 99
+ GRL + +N+G+ G G+ ++ NV Q ++ D++LTG + +
Sbjct: 100 EQLGRLDIIVANAGV-GTDGRKLHKIRD------------NVWQDMI-DINLTGVWHTVK 145
Query: 100 AAWPH-MKKQNYGRLVMTASNSG 121
A PH + G +V+T+S G
Sbjct: 146 AGVPHVLSGGRGGSIVLTSSVGG 168
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG 53
+ S DW+ + D + G ++RA P M ++N+G ++ S +G
Sbjct: 93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137
>pdb|1Q36|A Chain A, Epsp Synthase (Asp313ala) Liganded With Tetrahedral
Reaction Intermediate
Length = 427
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|2QFS|A Chain A, E.coli Epsp Synthase Pro101ser Liganded With S3p
pdb|2QFT|A Chain A, E.Coli Epsp Synthase Pro101ser Liganded With S3p And
Glyphosate
Length = 427
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|2QFQ|A Chain A, E. Coli Epsp Synthase Pro101leu Liganded With S3p
pdb|2QFU|A Chain A, E.Coli Epsp Synthase Pro101leu Liganded With S3p And
Glyphosate
Length = 427
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|1MI4|A Chain A, Glyphosate Insensitive G96a Mutant Epsp Synthase Liganded
With Shikimate-3-Phosphate
Length = 427
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|3FK0|A Chain A, E. Coli Epsp Synthase (Tips Mutation) Liganded With S3p
pdb|3FK1|A Chain A, E. Coli Epsp Synthase (Tips Mutation) Liganded With S3p
And Glyphosate
Length = 427
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|1G6S|A Chain A, Structure Of Epsp Synthase Liganded With Shikimate-3-
Phosphate And Glyphosate
pdb|1G6T|A Chain A, Structure Of Epsp Synthase Liganded With Shikimate-3-
Phosphate
pdb|1X8R|A Chain A, Epsps Liganded With The (s)-phosphonate Analog Of The
Tetrahedral Reaction Intermediate
pdb|1X8T|A Chain A, Epsps Liganded With The (r)-phosphonate Analog Of The
Tetrahedral Reaction Intermediate
pdb|2AA9|A Chain A, Epsp Synthase Liganded With Shikimate
pdb|2AAY|A Chain A, Epsp Synthase Liganded With Shikimate And Glyphosate
pdb|2PQ9|A Chain A, E. Coli Epsps Liganded With (R)-Difluoromethyl Tetrahedral
Reaction Intermediate Analog
Length = 427
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANY 63
A ++D W V + +LTG FRV++ M ++ GR+V AS G G A Y
Sbjct: 120 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPY 177
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLV 46
+ K + +W + +LT F + + P M+KQN+GR++
Sbjct: 97 VFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRII 142
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 38 KKQNYGRLVMTASNSGLLGNFGQAN--------YRFLSQQLLEWCETNVLNVEQQLVQDV 89
KK++ ++V A + +FG+ + Y F ++L+++ E +++Q
Sbjct: 68 KKEDLHKIVEEA-----MSHFGKIDFLINNAGPYVFERKKLVDYEEDEW----NEMIQG- 117
Query: 90 HLTGAFRVSRAAWPHMKKQNYGRLV 114
+LT F + + P M+KQN+GR++
Sbjct: 118 NLTAVFHLLKLVVPVMRKQNFGRII 142
>pdb|3FJX|A Chain A, E. Coli Epsp Synthase (T97i) Liganded With S3p
pdb|3FJZ|A Chain A, E. Coli Epsp Synthase (T97i) Liganded With S3p And
Glyphosate
Length = 427
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++D W D++L G FR +A M +Q G +V S SGL+ N Q
Sbjct: 110 MTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ 160
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGA 138
D++L G FR +A M +Q G +V S SGL+ N Q ++ A A
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKA 170
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAF---RVSRAAWPHMKKQNYGRLVMTASNSGLLGN 57
+LRD + +Q V +G RV+R A P + +Y V+ +S S GN
Sbjct: 1974 VLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL---DY--FVIFSSVSCGRGN 2028
Query: 58 FGQANYRFLSQQLLEWCE 75
GQANY F + + CE
Sbjct: 2029 AGQANYGFANSAMERICE 2046
>pdb|1EPS|A Chain A, Structure And Topological Symmetry Of The Glyphosphate
5-enol- Pyruvylshikimate-3-phosphate Synthase: A
Distinctive Protein Fold
Length = 427
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 128 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 185
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-------LLGNFGQ 128
V+ ++ LV ++ + + ++ Q+Y + V+ S + G+
Sbjct: 186 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASS 245
Query: 129 ANYSFLAGGALK 140
A+Y FLA A+K
Sbjct: 246 ASY-FLAAAAIK 256
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 4 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS 50
+++ +D WQ ++H+ A R++R P M+ + G ++ AS
Sbjct: 98 NETIMEAADEKWQFYWELHVMAAVRLARGLVPGMRARGGGAIIHNAS 144
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANY 63
D+Q V DV+L G F V R M + G ++ TAS + G GQA Y
Sbjct: 113 DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAY 168
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V DV+L G F V R M + G ++ TAS + G GQA YS GG
Sbjct: 115 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANY 63
D+Q V DV+L G F V R M + G ++ TAS + G GQA Y
Sbjct: 113 DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAY 168
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V DV+L G F V R M + G ++ TAS + G GQA YS GG
Sbjct: 115 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANY 63
D+Q V DV+L G F V R M + G ++ TAS + G GQA Y
Sbjct: 115 DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAY 170
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V DV+L G F V R M + G ++ TAS + G GQA YS GG
Sbjct: 117 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 176
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+SD +W ++L FR+S+ A PHM+K G ++ +S +G N A+Y
Sbjct: 109 MSDFEWAF--KLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASY 160
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 95 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
FR+S+ A PHM+K G ++ +S +G N A+Y
Sbjct: 124 FRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASY 160
>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|B Chain B, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|C Chain C, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|D Chain D, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
Length = 281
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 88 DVHLTGAFRVSR-------AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALK 140
D++L G + V+R AA P + G LV+TAS +G G GQ Y+ G +
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGER-GALVLTASIAGYEGQIGQTAYAAAKAGVIG 196
Query: 141 I 141
+
Sbjct: 197 L 197
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 20 DVHLTGAFRVSR-------AAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
D++L G + V+R AA P + G LV+TAS +G G GQ Y
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGER-GALVLTASIAGYEGQIGQTAY 187
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 13 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG 53
TDW + D +L G ++RAA PH+ + G +V +S +G
Sbjct: 106 TDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAG 145
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 56
++D +W V +V LT R +RAA + + ++G +++ +N+ +LG
Sbjct: 120 MTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIV--NNASVLG 164
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 66 LSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN 125
L+ +L EW + V +V+LT +S A M+K G +V AS GL
Sbjct: 94 LTVRLPEW----------RRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE 143
Query: 126 FGQANYSFLAGGALKIERSV 145
A Y+ GG + + RS+
Sbjct: 144 QENAAYNASKGGLVNLTRSL 163
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 13 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+W+ V +V+LT +S A M+K G +V AS GL A Y
Sbjct: 99 PEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAY 149
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
D++ V D+++ GAF V++ A M G +V TAS S G
Sbjct: 117 DFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG 162
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 55 LGNFGQANYRFLSQQLLEWCETNVL---NVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYG 111
+ G+ + F + +L ++L N + + V D+++ GAF V++ A M G
Sbjct: 87 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG 146
Query: 112 RLVMTASNSGLLGNFG 127
+V TAS S G
Sbjct: 147 SIVFTASISSFTAGEG 162
>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
pdb|3T4X|B Chain B, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
Length = 267
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I + I D DW + +V++ R++R+ ++ GR++ AS + + +
Sbjct: 95 IFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEX 154
Query: 61 ANY 63
A+Y
Sbjct: 155 AHY 157
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAA---WPHMKKQNYGRLVMTASNSGLLGN 57
K ++ D+ V DV++ G F RA W ++KQ G +V+T+S S + N
Sbjct: 106 KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLW--LQKQQKGSIVVTSSMSSQIIN 159
>pdb|1P88|A Chain A, Substrate-Induced Structural Changes To The Isolated N-
Terminal Domain Of 5-Enolpyruvylshikimate-3-Phosphate
Synthase
pdb|1P89|A Chain A, Substrate-Induced Structural Changes To The Isolated
N-Terminal Domain Of 5-Enolpyruvylshikimate-3-Phosphate
Synthase
Length = 216
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 22 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---GQANYRFLSQQLLE---WCE 75
HL A R+ A +++++NY L + +G GN G + +FL+ L+ E
Sbjct: 104 HLVDALRLGGAKITYLEQENYPPLRLQGGFTG--GNVDVDGSVSSQFLTALLMTAPLAPE 161
Query: 76 TNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS 120
V+ ++ LV ++ + + ++ Q+Y + V+ S
Sbjct: 162 DTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQS 206
>pdb|4B4T|O Chain O, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 393
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 81 VEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQAN 130
+E V+++ + +S+A H+ K N LVM A + GLL G+ Q N
Sbjct: 297 IETVFVKNIRMLSFEDISKAT--HLPKDNVEHLVMRAISLGLLKGSIDQVN 345
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 17 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQAN 62
V+++ + +S+A H+ K N LVM A + GLL G+ Q N
Sbjct: 301 FVKNIRMLSFEDISKAT--HLPKDNVEHLVMRAISLGLLKGSIDQVN 345
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 13 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG 53
TDW D +L G +RAA PH+ + G +V +S +G
Sbjct: 106 TDWTRXIDTNLLGLXYXTRAALPHLLRSK-GTVVQXSSIAG 145
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN 51
+S +DW V D +LTGAF SR A + + + V+ S+
Sbjct: 103 EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
>pdb|3UOW|A Chain A, Crystal Structure Of Pf10_0123, A Gmp Synthetase From
Plasmodium Falciparum
pdb|3UOW|B Chain B, Crystal Structure Of Pf10_0123, A Gmp Synthetase From
Plasmodium Falciparum
Length = 556
Score = 27.7 bits (60), Expect = 2.7, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 54 LLGNFGQANYRFLSQQLLE---WCETNVLNVEQQLVQDVHLTGA------FRVSRAAWPH 104
L+ NFG + + ++L + ET VE + ++D+++ G + V+ A PH
Sbjct: 11 LVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPH 70
Query: 105 MKKQNY 110
+KK+ +
Sbjct: 71 LKKEVF 76
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN 51
+S +DW V D +LTGAF SR A + + + V+ S+
Sbjct: 103 EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
Length = 264
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 20 DVHLTGA--FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETN 77
D+H+ + + + A +MK+ N G+ V +GL+ +A + EW ETN
Sbjct: 63 DIHVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGF--------EWDETN 114
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN 51
+S +DW V D +LTGAF SR A + + + V+ S+
Sbjct: 103 EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN 51
+S +DW V D +LTGAF SR A + + + V+ S+
Sbjct: 103 EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
>pdb|2Z23|A Chain A, Crystal Structure Of Y.Pestis Oligo Peptide Binding
Protein Oppa With Tri-Lysine Ligand
Length = 517
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS 52
++ + +W+ D G + V+RAAW + L M SNS
Sbjct: 391 KLENQEWKTFLDTRHQGTYDVARAAWCADYNEPSSFLNMMLSNS 434
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 13 TDWQLVQDVHLTGAFRVSR--AAWPHMKKQNYGRLVMTASNS 52
TD +LV+D+++ GA+R A WP + N GR ++T +
Sbjct: 57 TDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTVDGA 98
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 74 CETNVLNVEQQLVQDVHLTGAFRVSR--AAWPHMKKQNYGRLVMTASNS 120
E L + +LV+D+++ GA+R A WP + N GR ++T +
Sbjct: 50 AEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTVDGA 98
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V +V+L G F V R M + G ++ TAS + G GQA YS GG
Sbjct: 114 QRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 173
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V +V+L G F V R M + G ++ TAS + G GQA YS GG
Sbjct: 115 QRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSFLAGG 137
Q V +V+L G F V R M + G ++ TAS + G GQA YS GG
Sbjct: 115 QRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
>pdb|1NY7|2 Chain 2, Cowpea Mosaic Virus (Cpmv)
pdb|2BFU|L Chain L, X-Ray Structure Of Cpmv Top Component
Length = 369
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 40 QNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEW---CETN 77
N G +M A NSG+ G + Y SQ + W C+ N
Sbjct: 82 DNSGCCLMLAINSGVRGKYSTDVYTICSQDSMTWNPGCKKN 122
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS 52
F ++ W+ ++++ F +++A P MK+ +GR++ S +
Sbjct: 97 PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT 143
>pdb|3O9P|A Chain A, The Structure Of The Escherichia Coli Murein Tripeptide
Binding Protein Mppa
Length = 519
Score = 26.6 bits (57), Expect = 5.9, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRL-VMTASNSGLLGNFGQANY-RFL 66
++ + +W+ D TG F V RA+W + L ++T+++SG + F Y + L
Sbjct: 393 KLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVL 452
Query: 67 SQQLLE 72
+Q E
Sbjct: 453 AQASTE 458
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRA-AWPHMKKQNYGRLVMTAS 50
I+R S+ DW V DV+L F ++A A + K G++V AS
Sbjct: 89 IIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS 139
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 15 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLV-MTASNSGLLGNFGQA 61
++ V D+ +G F VSR + + + G +V +TA+ LGN GQA
Sbjct: 129 FKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITAT----LGNRGQA 172
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 12 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQ 69
D W+ V V++ G F SRA M + G +V S SG + N Q +++ +
Sbjct: 106 DATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASK 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,946,852
Number of Sequences: 62578
Number of extensions: 134596
Number of successful extensions: 517
Number of sequences better than 100.0: 150
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 283
Number of HSP's gapped (non-prelim): 264
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)