RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16222
(146 letters)
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 122 bits (308), Expect = 5e-35
Identities = 46/63 (73%), Positives = 56/63 (88%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+SF+RISD DW ++Q VHL G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQ
Sbjct: 102 ILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ 161
Query: 61 ANY 63
ANY
Sbjct: 162 ANY 164
Score = 98.6 bits (246), Expect = 8e-26
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++Q VHL G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQANYS
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS 165
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 122 bits (308), Expect = 1e-33
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+SFA++S +W VQ VHL G F +SR AWP+ ++ +GR++ S SG+ GNFGQ
Sbjct: 405 ILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ 464
Query: 61 ANY 63
ANY
Sbjct: 465 ANY 467
Score = 122 bits (307), Expect = 2e-33
Identities = 38/63 (60%), Positives = 51/63 (80%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD S ++++ D++LV DVHL GAF V++AAWP+ +KQ YGR+V T+S +GL GNFGQ
Sbjct: 101 ILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ 160
Query: 61 ANY 63
ANY
Sbjct: 161 ANY 163
Score = 97.8 bits (244), Expect = 8e-25
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+LV DVHL GAF V++AAWP+ +KQ YGR+V T+S +GL GNFGQANY+
Sbjct: 116 KLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA 164
Score = 97.5 bits (243), Expect = 1e-24
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
VQ VHL G F +SR AWP+ ++ +GR++ S SG+ GNFGQANYS
Sbjct: 420 DSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYS 468
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 121 bits (306), Expect = 3e-33
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILRD+S + S+ DW LV DVHL G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ
Sbjct: 112 ILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ 171
Query: 61 ANY 63
NY
Sbjct: 172 VNY 174
Score = 96.4 bits (240), Expect = 2e-24
Identities = 32/49 (65%), Positives = 43/49 (87%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
LV DVHL G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ NY+
Sbjct: 127 NLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYT 175
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 115 bits (290), Expect = 2e-32
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK------KQNYGRLVMTASNSGL 54
I+RD+ A S+ ++ V VHL G F R A + + K GR++ T+S +GL
Sbjct: 124 IVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183
Query: 55 LGNFGQANY 63
G+ GQ NY
Sbjct: 184 QGSVGQGNY 192
Score = 90.9 bits (226), Expect = 6e-23
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMK------KQNYGRLVMTASNSGLLGNFGQANYS 132
V VHL G F R A + + K GR++ T+S +GL G+ GQ NYS
Sbjct: 139 DAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYS 193
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 94.5 bits (236), Expect = 7e-25
Identities = 13/63 (20%), Positives = 29/63 (46%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I F ++ W+ ++++ F +++A P MK+ +GR++ S + L
Sbjct: 92 IYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY 151
Query: 61 ANY 63
+Y
Sbjct: 152 THY 154
Score = 75.6 bits (187), Expect = 1e-17
Identities = 10/47 (21%), Positives = 23/47 (48%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++++ F +++A P MK+ +GR++ S + L +Y
Sbjct: 109 TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYI 155
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 91.4 bits (228), Expect = 1e-23
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
ILR + ++S DWQ V++ GAF + + ++Q G +V AS++ G
Sbjct: 84 ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGM 143
Query: 61 ANY 63
+ Y
Sbjct: 144 SAY 146
Score = 71.4 bits (176), Expect = 4e-16
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
Q V++ GAF + + ++Q G +V AS++ G + Y
Sbjct: 99 QQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYG 147
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 87.2 bits (217), Expect = 5e-22
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG 59
I+ ++ + W+ + DV+LTG F V+RA M+ GR++ ASN+ G
Sbjct: 90 IVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN 149
Query: 60 QANY 63
A Y
Sbjct: 150 MAAY 153
Score = 69.4 bits (171), Expect = 2e-15
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYS 132
+ DV+LTG F V+RA M+ GR++ ASN+ G A Y
Sbjct: 107 IIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYV 154
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 87.2 bits (217), Expect = 5e-22
Identities = 10/63 (15%), Positives = 17/63 (26%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
R +FA +D W + RA P ++ + +V S
Sbjct: 97 QGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM 156
Query: 61 ANY 63
Sbjct: 157 VAT 159
Score = 69.5 bits (171), Expect = 3e-15
Identities = 6/47 (12%), Positives = 11/47 (23%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ RA P ++ + +V S S
Sbjct: 114 ELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS 160
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 86.8 bits (216), Expect = 9e-22
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I + W V +LTG F A P M K+NYGR+V +S G NF Q
Sbjct: 109 ISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQ 168
Query: 61 ANY 63
A+Y
Sbjct: 169 ASY 171
Score = 70.2 bits (173), Expect = 2e-15
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V +LTG F A P M K+NYGR+V +S G NF QA+Y
Sbjct: 124 DEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYV 172
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 86.5 bits (215), Expect = 1e-21
Identities = 21/63 (33%), Positives = 28/63 (44%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++ +D DW L V++ FR+ RAA P M G +V AS GL G
Sbjct: 104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGH 163
Query: 61 ANY 63
A Y
Sbjct: 164 ALY 166
Score = 69.1 bits (170), Expect = 3e-15
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V++ FR+ RAA P M G +V AS GL G A Y
Sbjct: 121 SLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYC 167
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 86.5 bits (215), Expect = 1e-21
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFG 59
+ D A ++ + V++ G F +A + GR+V+T+S +G + G G
Sbjct: 98 VFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG 157
Query: 60 QANY 63
++Y
Sbjct: 158 WSHY 161
Score = 68.4 bits (168), Expect = 6e-15
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYS 132
+ V++ G F +A + GR+V+T+S +G + G G ++Y
Sbjct: 113 NGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG 162
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 85.7 bits (213), Expect = 2e-21
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS--GLLGNF 58
+ K + +W + +LT F + + P M+KQN+GR++ G
Sbjct: 97 VFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI 156
Query: 59 GQANY 63
++ +
Sbjct: 157 YRSAF 161
Score = 68.4 bits (168), Expect = 6e-15
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS--GLLGNFGQANYS 132
+ +LT F + + P M+KQN+GR++ G ++ ++
Sbjct: 114 MIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA 162
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 85.3 bits (212), Expect = 2e-21
Identities = 13/63 (20%), Positives = 26/63 (41%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ K F ++ D+ V++ G F +++ A M KQ G +V ++ G
Sbjct: 106 VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM 165
Query: 61 ANY 63
+
Sbjct: 166 PSA 168
Score = 66.0 bits (162), Expect = 4e-14
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 131
V++ G F +++ A M KQ G +V ++ G +
Sbjct: 123 NLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSA 168
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 84.9 bits (211), Expect = 3e-21
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD ++ DW+LV V+LTG+F V++AA M+++N G +V+TAS LGN GQ
Sbjct: 87 ITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQ 145
Query: 61 ANY 63
ANY
Sbjct: 146 ANY 148
Score = 68.3 bits (168), Expect = 6e-15
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+LV V+LTG+F V++AA M+++N G +V+TAS LGN GQANY+
Sbjct: 102 ELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYA 149
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 84.9 bits (211), Expect = 5e-21
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
+ ++D +W V +V LT R +RAA + + ++ G +V AS G
Sbjct: 111 LGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS 170
Query: 60 QANY 63
Q++Y
Sbjct: 171 QSHY 174
Score = 67.6 bits (166), Expect = 1e-14
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V +V LT R +RAA + + ++ G +V AS G Q++Y+
Sbjct: 126 DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYA 175
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 84.6 bits (210), Expect = 6e-21
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNF 58
A + D W V D +LTG FRV+R M++ +GR+V AS G G
Sbjct: 111 RNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM 170
Query: 59 GQANY 63
A Y
Sbjct: 171 YAAPY 175
Score = 66.9 bits (164), Expect = 3e-14
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D +LTG FRV+R M++ +GR+V AS G G A Y+
Sbjct: 128 VLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT 176
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 84.2 bits (209), Expect = 8e-21
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I + I D DW + +V++ R++R+ M ++ GR++ AS + ++ +
Sbjct: 95 IFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM 154
Query: 61 ANY 63
A+Y
Sbjct: 155 AHY 157
Score = 64.9 bits (159), Expect = 1e-13
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+V++ R++R+ M ++ GR++ AS + ++ + A+YS
Sbjct: 114 EVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS 158
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 83.7 bits (208), Expect = 1e-20
Identities = 12/63 (19%), Positives = 28/63 (44%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+++ +D WQ ++ + A R++R P M+ + G ++ AS + + +
Sbjct: 95 TGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYE 154
Query: 61 ANY 63
Y
Sbjct: 155 PIY 157
Score = 66.4 bits (163), Expect = 4e-14
Identities = 9/45 (20%), Positives = 22/45 (48%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++ + A R++R P M+ + G ++ AS + + + Y+
Sbjct: 114 ELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYN 158
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 83.3 bits (207), Expect = 1e-20
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I S + +W+ V +V+LT +S A M+K G +V AS GL
Sbjct: 87 IAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN 146
Query: 61 ANY 63
A Y
Sbjct: 147 AAY 149
Score = 67.1 bits (165), Expect = 2e-14
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V +V+LT +S A M+K G +V AS GL A Y+
Sbjct: 104 VLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYN 150
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 83.4 bits (207), Expect = 2e-20
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFG 59
I + ++ V DV++ G +A + GR+++T+S +G + G G
Sbjct: 129 IFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG 188
Query: 60 QANY 63
++Y
Sbjct: 189 WSHY 192
Score = 66.1 bits (162), Expect = 5e-14
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYS 132
V DV++ G +A + GR+++T+S +G + G G ++Y
Sbjct: 144 SEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG 193
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 83.0 bits (206), Expect = 2e-20
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
K F + +D++ ++L FR+S+ A PHM+K G ++ +S +G N
Sbjct: 99 GGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM 157
Query: 61 ANY 63
A+Y
Sbjct: 158 ASY 160
Score = 70.6 bits (174), Expect = 8e-16
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++L FR+S+ A PHM+K G ++ +S +G N A+Y
Sbjct: 115 AFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYG 161
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 82.6 bits (205), Expect = 3e-20
Identities = 8/63 (12%), Positives = 20/63 (31%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ + +T W +++ ++ A M+K G +V +S +
Sbjct: 92 SGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY 151
Query: 61 ANY 63
Sbjct: 152 TTV 154
Score = 64.5 bits (158), Expect = 1e-13
Identities = 6/47 (12%), Positives = 15/47 (31%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+++ ++ A M+K G +V +S +
Sbjct: 109 TMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVG 155
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 83.1 bits (206), Expect = 4e-20
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFG 59
I ++D W + +L GA+ RA P M ++ G ++ +S GL G G
Sbjct: 145 ISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPG 204
Query: 60 QANY 63
Q++Y
Sbjct: 205 QSHY 208
Score = 66.9 bits (164), Expect = 3e-14
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
+ +L GA+ RA P M ++ G ++ +S GL G GQ++Y+
Sbjct: 160 SDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYA 209
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 81.8 bits (203), Expect = 5e-20
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD F +++ DWQ V D +LT F V++ M ++ +GR++ +S +G G FGQ
Sbjct: 101 ITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ 160
Query: 61 ANY 63
NY
Sbjct: 161 TNY 163
Score = 64.5 bits (158), Expect = 2e-13
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D +LT F V++ M ++ +GR++ +S +G G FGQ NYS
Sbjct: 118 VIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYS 164
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 81.9 bits (203), Expect = 6e-20
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I + W + ++L+ F +R A P M+ +N+GR++ AS GL+G+ G+
Sbjct: 89 IQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGK 148
Query: 61 ANY 63
A Y
Sbjct: 149 AAY 151
Score = 68.8 bits (169), Expect = 3e-15
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ ++L+ F +R A P M+ +N+GR++ AS GL+G+ G+A Y
Sbjct: 104 DKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYV 152
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 82.2 bits (204), Expect = 6e-20
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFG 59
+L ++D W V V+LTG +R RA P M + N G +V+ +S++GL G
Sbjct: 115 VLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG 174
Query: 60 QANY 63
+Y
Sbjct: 175 NGHY 178
Score = 66.4 bits (163), Expect = 4e-14
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
V V+LTG +R RA P M + N G +V+ +S++GL G +YS
Sbjct: 130 DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYS 179
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 81.5 bits (202), Expect = 8e-20
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I W + ++L+ F + AA PHMKKQ +GR++ AS GL+ + +
Sbjct: 93 IQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK 152
Query: 61 ANY 63
+ Y
Sbjct: 153 SAY 155
Score = 69.2 bits (170), Expect = 3e-15
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ ++L+ F + AA PHMKKQ +GR++ AS GL+ + ++ Y
Sbjct: 108 DAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYV 156
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 81.5 bits (202), Expect = 8e-20
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD +F +++ DW V L F V++ M ++ +GR+V S +G G FGQ
Sbjct: 113 ITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ 172
Query: 61 ANY 63
ANY
Sbjct: 173 ANY 175
Score = 64.1 bits (157), Expect = 2e-13
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V L F V++ M ++ +GR+V S +G G FGQANY+
Sbjct: 130 VMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYA 176
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 81.5 bits (202), Expect = 8e-20
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNF 58
+ A ++D W V + +LTG FRV++ M ++ GR+V AS G G
Sbjct: 109 RPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV 168
Query: 59 GQANY 63
A Y
Sbjct: 169 HAAPY 173
Score = 64.2 bits (157), Expect = 3e-13
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +LTG FRV++ M ++ GR+V AS G G A YS
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS 174
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 81.0 bits (201), Expect = 1e-19
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ + W+ V V+LTG+F V+R A +++ G LV+T S +G LG FG
Sbjct: 90 VAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAG-LGAFGL 146
Query: 61 ANY 63
A+Y
Sbjct: 147 AHY 149
Score = 63.3 bits (155), Expect = 4e-13
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V V+LTG+F V+R A +++ G LV+T S +G LG FG A+Y+
Sbjct: 105 EKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAG-LGAFGLAHYA 150
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 80.7 bits (200), Expect = 1e-19
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 1 ILRDKS-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
+ + + D++ + F + A MKK+ G ++ S +
Sbjct: 82 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE 141
Query: 60 QANY 63
+ Y
Sbjct: 142 LSTY 145
Score = 68.4 bits (168), Expect = 6e-15
Identities = 8/47 (17%), Positives = 16/47 (34%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ F + A MKK+ G ++ S + + Y+
Sbjct: 100 AVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYT 146
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 81.1 bits (201), Expect = 1e-19
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFG 59
+ + I+D +W DV+ G F ++ A H G +V TAS + +G
Sbjct: 96 VSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL 155
Query: 60 QANY 63
A+Y
Sbjct: 156 LAHY 159
Score = 63.7 bits (156), Expect = 3e-13
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
DV+ G F ++ A H G +V TAS + +G A+YS
Sbjct: 113 NFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYS 160
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 81.2 bits (201), Expect = 1e-19
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ + W + V+L+ +F R A P MKK+ +GR++ AS GL+ + +
Sbjct: 114 VQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK 173
Query: 61 ANY 63
+ Y
Sbjct: 174 SAY 176
Score = 68.8 bits (169), Expect = 5e-15
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V+L+ +F R A P MKK+ +GR++ AS GL+ + ++ Y
Sbjct: 129 DRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYV 177
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 80.2 bits (199), Expect = 2e-19
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + W V D++LTG F ++AA M K+ GR++ AS GL+GN GQ
Sbjct: 89 ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ 148
Query: 61 ANY 63
ANY
Sbjct: 149 ANY 151
Score = 63.7 bits (156), Expect = 3e-13
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D++LTG F ++AA M K+ GR++ AS GL+GN GQANY+
Sbjct: 106 VIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYA 152
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 80.3 bits (199), Expect = 2e-19
Identities = 31/63 (49%), Positives = 37/63 (58%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ DWQ V D++L G F SRAA M KQ GR++ AS G +GN GQ
Sbjct: 116 ITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ 175
Query: 61 ANY 63
ANY
Sbjct: 176 ANY 178
Score = 63.7 bits (156), Expect = 3e-13
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D++L G F SRAA M KQ GR++ AS G +GN GQANYS
Sbjct: 133 VLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS 179
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 79.9 bits (198), Expect = 2e-19
Identities = 8/66 (12%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 1 ILRDKSFARI---SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN 57
I R + + S+ D + + + + ++A ++ ++ S+ G
Sbjct: 82 IPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL 141
Query: 58 FGQANY 63
Y
Sbjct: 142 AYNPLY 147
Score = 68.3 bits (168), Expect = 5e-15
Identities = 4/47 (8%), Positives = 14/47 (29%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + + ++A ++ ++ S+ G Y
Sbjct: 102 MFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYG 148
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 79.8 bits (198), Expect = 3e-19
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
K F + D++ ++++ F +S+ P M+K G ++ S + N
Sbjct: 98 GGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM 156
Query: 61 ANY 63
+Y
Sbjct: 157 TSY 159
Score = 68.7 bits (169), Expect = 4e-15
Identities = 9/47 (19%), Positives = 21/47 (44%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++++ F +S+ P M+K G ++ S + N +Y+
Sbjct: 114 AYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA 160
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 79.5 bits (197), Expect = 3e-19
Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ + ++ + V L + +SR + K GR++ AS
Sbjct: 85 RGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDS 143
Query: 61 ANY 63
Y
Sbjct: 144 EAY 146
Score = 62.9 bits (154), Expect = 5e-13
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V L + +SR + K GR++ AS Y+
Sbjct: 102 ILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYA 147
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 79.4 bits (197), Expect = 4e-19
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD ++S+ DW V + +L A+ ++A M KQ G+++ S +G++GN GQ
Sbjct: 93 ITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ 152
Query: 61 ANY 63
ANY
Sbjct: 153 ANY 155
Score = 62.9 bits (154), Expect = 5e-13
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +L A+ ++A M KQ G+++ S +G++GN GQANY+
Sbjct: 110 VLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYA 156
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 78.8 bits (195), Expect = 7e-19
Identities = 12/60 (20%), Positives = 22/60 (36%)
Query: 4 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ +W + V+L + + RA P M G ++ +S +G A Y
Sbjct: 120 GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAY 179
Score = 68.4 bits (168), Expect = 6e-15
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V+L + + RA P M G ++ +S +G A Y+
Sbjct: 134 LIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYT 180
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 79.1 bits (196), Expect = 7e-19
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-- 58
D S W V V L G F ++A H K++ G LV+TAS SG + NF
Sbjct: 111 ATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ 170
Query: 59 GQANY 63
Q +Y
Sbjct: 171 EQTSY 175
Score = 67.2 bits (165), Expect = 2e-14
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYS 132
V V L G F ++A H K++ G LV+TAS SG + NF Q +Y+
Sbjct: 128 VVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYN 176
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 78.7 bits (195), Expect = 7e-19
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ +D R+ + +W V + +L G F ++A M +Q +GR+V AS G+ GN GQ
Sbjct: 92 VTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ 151
Query: 61 ANY 63
ANY
Sbjct: 152 ANY 154
Score = 62.1 bits (152), Expect = 9e-13
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +L G F ++A M +Q +GR+V AS G+ GN GQANY
Sbjct: 109 VINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYV 155
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 78.8 bits (195), Expect = 7e-19
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 ILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
D+ V +++TGAF V +A M QNYGR+V TAS +G+ G
Sbjct: 94 YQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN 153
Query: 60 QANY 63
A Y
Sbjct: 154 MAAY 157
Score = 69.1 bits (170), Expect = 3e-15
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V +++TGAF V +A M QNYGR+V TAS +G+ G A Y
Sbjct: 112 VLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYG 158
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 78.8 bits (195), Expect = 9e-19
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I +S +W+ + DV+L G + S+ A P+M + +V +S +
Sbjct: 84 IESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNA 143
Query: 61 ANY 63
+ Y
Sbjct: 144 SAY 146
Score = 64.5 bits (158), Expect = 1e-13
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ DV+L G + S+ A P+M + +V +S + + Y
Sbjct: 101 IIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYV 147
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 78.4 bits (194), Expect = 1e-18
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ D R+++ ++ V + +LTGAFRV++ A M++ +GR++ S SGL G Q
Sbjct: 91 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ 150
Query: 61 ANY 63
ANY
Sbjct: 151 ANY 153
Score = 63.3 bits (155), Expect = 4e-13
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +LTGAFRV++ A M++ +GR++ S SGL G QANY+
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA 154
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 78.3 bits (194), Expect = 1e-18
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W V D +L G F + A P M +Q G ++ +S G +GN GQ
Sbjct: 92 ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ 151
Query: 61 ANY 63
ANY
Sbjct: 152 ANY 154
Score = 61.7 bits (151), Expect = 1e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D +L G F + A P M +Q G ++ +S G +GN GQANY
Sbjct: 109 VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYV 155
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 80.0 bits (198), Expect = 1e-18
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK A + + W V V+L R++ + GR++ +S +G+ GN GQ
Sbjct: 298 ITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ 357
Query: 61 ANY 63
NY
Sbjct: 358 TNY 360
Score = 61.5 bits (150), Expect = 3e-12
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V+L R++ + GR++ +S +G+ GN GQ NY+
Sbjct: 315 VIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYA 361
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 78.4 bits (194), Expect = 1e-18
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFG 59
I +D+ +S+ DW V V+L G F V++AA + G ++ +S G +GN G
Sbjct: 102 ITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG 161
Query: 60 QANY 63
Q NY
Sbjct: 162 QTNY 165
Score = 63.3 bits (155), Expect = 5e-13
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
V V+L G F V++AA + G ++ +S G +GN GQ NY+
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYA 166
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 78.3 bits (194), Expect = 1e-18
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+R K + D+ +L A+ +S+ A P +K G ++ +S +G++
Sbjct: 102 AIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG 161
Query: 61 ANY 63
+ Y
Sbjct: 162 SIY 164
Score = 63.7 bits (156), Expect = 3e-13
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+L A+ +S+ A P +K G ++ +S +G++ + YS
Sbjct: 119 HISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS 165
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 77.6 bits (192), Expect = 2e-18
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
+ I+ V ++++ G +AA KK+ + G+++ S +G +GN
Sbjct: 89 VAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE 148
Query: 60 QANY 63
A Y
Sbjct: 149 LAVY 152
Score = 61.8 bits (151), Expect = 1e-12
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V ++++ G +AA KK+ + G+++ S +G +GN A YS
Sbjct: 106 VYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYS 153
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 77.6 bits (192), Expect = 2e-18
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+ I ++ V+L GA +RA + M K+ G +V +S +
Sbjct: 101 KLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNY 157
Query: 63 Y 63
Y
Sbjct: 158 Y 158
Score = 62.1 bits (152), Expect = 1e-12
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V+L GA +RA + M K+ G +V +S + Y
Sbjct: 116 FMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG 159
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 77.5 bits (192), Expect = 2e-18
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ D DW+ V + +L+ FR +R A M K +GR+V S G+LGN GQ
Sbjct: 90 ITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQ 149
Query: 61 ANY 63
ANY
Sbjct: 150 ANY 152
Score = 61.3 bits (150), Expect = 2e-12
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +L+ FR +R A M K +GR+V S G+LGN GQANY
Sbjct: 107 VLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYV 153
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 77.6 bits (192), Expect = 2e-18
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I +D+ R+ D +W V D +L FR+SRA M K GR+V S G GN GQ
Sbjct: 115 ITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ 174
Query: 61 ANY 63
NY
Sbjct: 175 VNY 177
Score = 61.8 bits (151), Expect = 2e-12
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D +L FR+SRA M K GR+V S G GN GQ NY+
Sbjct: 132 VIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYA 178
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 78.0 bits (193), Expect = 2e-18
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD F R+ + +W+ V +L F +++ M YGR++ +S GL GN GQ
Sbjct: 131 ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ 190
Query: 61 ANY 63
ANY
Sbjct: 191 ANY 193
Score = 62.2 bits (152), Expect = 1e-12
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V +L F +++ M YGR++ +S GL GN GQANYS
Sbjct: 148 VLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS 194
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 77.2 bits (191), Expect = 3e-18
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-----NYGRLVMTASNSGLL 55
++ K I DT + V D ++ ++ A PH+ ++ T S +G
Sbjct: 96 LVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT 155
Query: 56 GNF-GQANY 63
G G Y
Sbjct: 156 GGGPGAGLY 164
Score = 58.3 bits (142), Expect = 2e-11
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQ-----NYGRLVMTASNSGLLGNF-GQANYS 132
V D ++ ++ A PH+ ++ T S +G G G Y
Sbjct: 113 VMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYG 165
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 76.8 bits (190), Expect = 4e-18
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ +D+ R+S+ D+ V + +LTG FRV + A M + GR+V+ +S GLLG+ GQ
Sbjct: 97 VTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQ 156
Query: 61 ANY 63
ANY
Sbjct: 157 ANY 159
Score = 61.8 bits (151), Expect = 1e-12
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +LTG FRV + A M + GR+V+ +S GLLG+ GQANY+
Sbjct: 114 VVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYA 160
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 76.8 bits (190), Expect = 4e-18
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQ 60
+ ++D W D++L G FR +A M +Q G +V S SGL+ N Q
Sbjct: 103 SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ 162
Query: 61 ANY 63
A Y
Sbjct: 163 AAY 165
Score = 67.5 bits (166), Expect = 1e-14
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYS 132
D++L G FR +A M +Q G +V S SGL+ N QA Y+
Sbjct: 116 LKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN 166
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 76.8 bits (190), Expect = 4e-18
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+ + +W + + +LT FR+S+A M K+ GR++ S G +GN GQ
Sbjct: 93 ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 152
Query: 61 ANY 63
ANY
Sbjct: 153 ANY 155
Score = 61.0 bits (149), Expect = 3e-12
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + +LT FR+S+A M K+ GR++ S G +GN GQANY+
Sbjct: 110 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYA 156
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 77.2 bits (191), Expect = 4e-18
Identities = 12/64 (18%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFG 59
+ +++ I+ D++ V D+++TG + A P + + G +++ +S +G+
Sbjct: 111 VAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF 170
Query: 60 QANY 63
+Y
Sbjct: 171 MIHY 174
Score = 61.8 bits (151), Expect = 1e-12
Identities = 10/50 (20%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
+ V D+++TG + A P + + G +++ +S +G+ +Y+
Sbjct: 126 RDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYT 175
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 76.4 bits (189), Expect = 5e-18
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
+ S +S +DW V D +LTGAF SR A + + + G ++ +S +
Sbjct: 95 LENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL 154
Query: 60 QANY 63
+Y
Sbjct: 155 FVHY 158
Score = 61.0 bits (149), Expect = 3e-12
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V D +LTGAF SR A + + + G ++ +S + +Y+
Sbjct: 110 NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA 159
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 76.4 bits (189), Expect = 8e-18
Identities = 11/63 (17%), Positives = 29/63 (46%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++ K ++ D+ ++ + A+ +S+ A+P +K G ++ +S +G
Sbjct: 109 VVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV 168
Query: 61 ANY 63
+ Y
Sbjct: 169 SLY 171
Score = 62.9 bits (154), Expect = 7e-13
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + A+ +S+ A+P +K G ++ +S +G + YS
Sbjct: 126 IMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS 172
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 76.0 bits (188), Expect = 9e-18
Identities = 15/61 (24%), Positives = 22/61 (36%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
R F + DW + A V R A M ++ +GR+V S + L A
Sbjct: 97 RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLAL 156
Query: 63 Y 63
Sbjct: 157 S 157
Score = 60.6 bits (148), Expect = 4e-12
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ A V R A M ++ +GR+V S + L A +
Sbjct: 114 RLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSN 158
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 76.1 bits (188), Expect = 9e-18
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-- 58
+ + + L+Q V+ G+F ++A PH+ + ++ A L +
Sbjct: 100 AIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG 159
Query: 59 GQANY 63
Y
Sbjct: 160 AHTGY 164
Score = 63.0 bits (154), Expect = 7e-13
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYS 132
L+Q V+ G+F ++A PH+ + ++ A L + Y+
Sbjct: 115 DLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYT 165
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 76.5 bits (189), Expect = 1e-17
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNF 58
+ + R+ W+ + DV+L GA+ +R A PH+ + G +V T+S GL G
Sbjct: 127 LASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE 186
Query: 59 GQANY 63
NY
Sbjct: 187 NIGNY 191
Score = 65.7 bits (161), Expect = 7e-14
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + DV+L GA+ +R A PH+ + G +V T+S GL G NY
Sbjct: 143 RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYI 192
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 75.7 bits (187), Expect = 1e-17
Identities = 11/63 (17%), Positives = 30/63 (47%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ R + + +++ D+ + +L G F +++A + M++Q+ G + S +
Sbjct: 96 VGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS 155
Query: 61 ANY 63
+ Y
Sbjct: 156 SIY 158
Score = 63.8 bits (156), Expect = 2e-13
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ +L G F +++A + M++Q+ G + S + + Y
Sbjct: 115 NTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC 159
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 75.6 bits (187), Expect = 1e-17
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 ILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
I+ A +SD W+ V V+L AF SRA P M KQ G +V TAS +G+ G F
Sbjct: 94 IMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA 153
Query: 60 QANY 63
A Y
Sbjct: 154 GAPY 157
Score = 64.8 bits (159), Expect = 1e-13
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V V+L AF SRA P M KQ G +V TAS +G+ G F A Y+
Sbjct: 110 ERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYT 158
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 75.2 bits (186), Expect = 1e-17
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--GNF 58
+ K +S +W+ V +HL AF +++AA PHM + +GR++ S + G
Sbjct: 80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPV 139
Query: 59 GQANY 63
Y
Sbjct: 140 PIPAY 144
Score = 59.8 bits (146), Expect = 7e-12
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--GNFGQANYS 132
V +HL AF +++AA PHM + +GR++ S + G Y+
Sbjct: 97 VLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYT 145
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 75.2 bits (186), Expect = 1e-17
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RDK F R+S DW+ V V+LTG F V++ + M KQ +GR+V +S G GN GQ
Sbjct: 95 ITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ 154
Query: 61 ANY 63
NY
Sbjct: 155 VNY 157
Score = 59.8 bits (146), Expect = 6e-12
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V+LTG F V++ + M KQ +GR+V +S G GN GQ NYS
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYS 158
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 75.2 bits (186), Expect = 1e-17
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD R+S+ +WQ V + +L+ FR+S+ M K+ +GR++ S G GN GQ
Sbjct: 92 ITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ 151
Query: 61 ANY 63
NY
Sbjct: 152 TNY 154
Score = 59.8 bits (146), Expect = 6e-12
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +L+ FR+S+ M K+ +GR++ S G GN GQ NY
Sbjct: 109 VINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYC 155
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 75.3 bits (186), Expect = 1e-17
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
I + K +++ D + + V++ F +AA + G+++ AS + + G
Sbjct: 91 IAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI 150
Query: 60 QANY 63
+ Y
Sbjct: 151 LSAY 154
Score = 59.5 bits (145), Expect = 1e-11
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
+ V++ F +AA + G+++ AS + + G + YS
Sbjct: 108 IYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYS 155
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 74.9 bits (185), Expect = 2e-17
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ K FA + + ++ + GA R+ + P + +++ G +V S
Sbjct: 99 VPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPAL-EESKGAVVNVNSMVVRHSQAKY 157
Query: 61 ANY 63
Y
Sbjct: 158 GAY 160
Score = 61.4 bits (150), Expect = 2e-12
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++ + GA R+ + P ++ ++ G +V S Y
Sbjct: 116 AIELTVFGALRLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYK 161
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 75.3 bits (186), Expect = 2e-17
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++ S + D+ V ++L GA+ ++ A P M ++ G +V +S +G + G
Sbjct: 113 VVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGT 172
Query: 61 ANY 63
Y
Sbjct: 173 GAY 175
Score = 61.4 bits (150), Expect = 2e-12
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V ++L GA+ ++ A P M ++ G +V +S +G + G Y
Sbjct: 130 VIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYG 176
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 74.5 bits (184), Expect = 2e-17
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I D R+ D D+ V D++L F ++R A M ++ YGR++ +S G+ GN GQ
Sbjct: 94 ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ 153
Query: 61 ANY 63
ANY
Sbjct: 154 ANY 156
Score = 59.4 bits (145), Expect = 9e-12
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D++L F ++R A M ++ YGR++ +S G+ GN GQANY
Sbjct: 111 VIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYC 157
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 74.9 bits (185), Expect = 2e-17
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I RD F R+ D DW V V+LT A ++R M ++ YGR++ S G++GN GQ
Sbjct: 111 ITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ 170
Query: 61 ANY 63
NY
Sbjct: 171 TNY 173
Score = 59.9 bits (146), Expect = 8e-12
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V+LT A ++R M ++ YGR++ S G++GN GQ NY
Sbjct: 128 VLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYC 174
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 74.5 bits (184), Expect = 3e-17
Identities = 12/61 (19%), Positives = 25/61 (40%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+ F +++ D++ D ++ R P MK++ +GR+V S S +
Sbjct: 93 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYT 152
Query: 63 Y 63
Sbjct: 153 S 153
Score = 58.7 bits (143), Expect = 2e-11
Identities = 10/45 (22%), Positives = 18/45 (40%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D ++ R P MK++ +GR+V S S + +
Sbjct: 110 DSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSN 154
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 74.1 bits (183), Expect = 4e-17
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 ILRDKS-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
I+ ++ ++ D D+ V V++ F ++RA P +K+ + T+S+ G G
Sbjct: 104 IIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN 163
Query: 60 QANY 63
Y
Sbjct: 164 WGAY 167
Score = 62.2 bits (152), Expect = 9e-13
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 14/94 (14%)
Query: 39 KQNYGRLVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQQLVQDVHLTGAFRVS 98
+ +GRL N+ ++G ++ V V++ F ++
Sbjct: 89 EHEFGRLDGLLHNASIIGPRT----PLEQLPDEDF----------MQVMHVNVNATFMLT 134
Query: 99 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
RA P +K+ + T+S+ G G Y
Sbjct: 135 RALLPLLKRSEDASIAFTSSSVGRKGRANWGAYG 168
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 74.2 bits (183), Expect = 5e-17
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 1 ILRDK-SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGN 57
++ W + +LTGAF ++ A+ MK Q GR++ S S
Sbjct: 121 SNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR 180
Query: 58 FGQANY 63
A Y
Sbjct: 181 PNSAPY 186
Score = 63.0 bits (154), Expect = 6e-13
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYS 132
+ +LTGAF ++ A+ MK Q GR++ S S A Y+
Sbjct: 139 IVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT 187
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 74.2 bits (183), Expect = 5e-17
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 1 ILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--LGN 57
I + +W V+L G F P++K++ G +V+ +S +G
Sbjct: 115 INGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT 174
Query: 58 FGQANY 63
G Y
Sbjct: 175 PGATAY 180
Score = 63.8 bits (156), Expect = 3e-13
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--LGNFGQANYS 132
V+L G F P++K++ G +V+ +S +G G Y+
Sbjct: 133 TIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT 181
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 73.7 bits (182), Expect = 6e-17
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I+ K + D+ L+ ++ A+ +S A P +K G +V +S SG L +
Sbjct: 97 IVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE 156
Query: 61 ANY 63
A Y
Sbjct: 157 AVY 159
Score = 61.0 bits (149), Expect = 3e-12
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ ++ A+ +S A P +K G +V +S SG L +A Y
Sbjct: 114 IMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG 160
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 74.2 bits (183), Expect = 6e-17
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I+R ++ ++ V D+ L F VS+A P M K+ +G+++ S LG
Sbjct: 121 IIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV 180
Query: 61 ANY 63
+ Y
Sbjct: 181 SAY 183
Score = 59.2 bits (144), Expect = 2e-11
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D+ L F VS+A P M K+ +G+++ S LG + Y+
Sbjct: 138 VIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA 184
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 73.5 bits (181), Expect = 7e-17
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 7/77 (9%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ +D ++ V ++ F R + M G++ T + + L G G
Sbjct: 93 ANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF 152
Query: 61 ANY-------RFLSQQL 70
A + R ++Q +
Sbjct: 153 AAFASAKFGLRAVAQSM 169
Score = 60.0 bits (146), Expect = 7e-12
Identities = 9/45 (20%), Positives = 18/45 (40%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++ F R + M G++ T + + L G G A ++
Sbjct: 112 EMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFA 156
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 73.3 bits (181), Expect = 9e-17
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I S ++ V +++LTG F + P MK G +V +S +GL+G
Sbjct: 89 ISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT 148
Query: 61 ANY 63
++Y
Sbjct: 149 SSY 151
Score = 59.4 bits (145), Expect = 1e-11
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V +++LTG F + P MK G +V +S +GL+G ++Y
Sbjct: 104 RKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYG 152
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 73.3 bits (181), Expect = 9e-17
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG 59
+ I+ ++ + +++ G +AA M Q G+++ AS +G G
Sbjct: 92 LFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL 151
Query: 60 QANY 63
A Y
Sbjct: 152 VAIY 155
Score = 58.7 bits (143), Expect = 2e-11
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYS 132
+ +++ G +AA M Q G+++ AS +G G A Y
Sbjct: 109 LFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYC 156
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 73.0 bits (180), Expect = 1e-16
Identities = 9/60 (15%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 7 FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK---QNYGRLVMTASNSGLLGNFGQANY 63
F + ++ + V+L G ++A M + ++ S S ++ + + +Y
Sbjct: 125 FLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDY 184
Score = 63.4 bits (155), Expect = 4e-13
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKK---QNYGRLVMTASNSGLLGNFGQANYS 132
+ V+L G ++A M + ++ S S ++ + + +Y
Sbjct: 136 IVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYC 185
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 72.7 bits (179), Expect = 1e-16
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
R+K+F + W + +V L G + S M G +V+ +S L
Sbjct: 102 RNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVP 160
Query: 63 Y 63
Y
Sbjct: 161 Y 161
Score = 59.9 bits (146), Expect = 6e-12
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ +V L G + S M G +V+ +S L Y
Sbjct: 117 INNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYG 162
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 72.1 bits (178), Expect = 2e-16
Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFG 59
+ + + DW ++++ + + +A P M Q G ++ +S + + G
Sbjct: 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN 143
Query: 60 QANY 63
+ Y
Sbjct: 144 RCVY 147
Score = 57.9 bits (141), Expect = 3e-11
Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQANYS 132
++++ + + +A P M Q G ++ +S + + G + YS
Sbjct: 99 DFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYS 148
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 72.6 bits (179), Expect = 2e-16
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I+ +S W+ V V+L A+ +SR+ M GR+V AS G
Sbjct: 116 IIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV 175
Query: 61 ANY 63
A Y
Sbjct: 176 AAY 178
Score = 59.1 bits (144), Expect = 2e-11
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V+L A+ +SR+ M GR+V AS G A Y+
Sbjct: 133 VLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYA 179
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 72.6 bits (179), Expect = 2e-16
Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFG 59
I + + V+L ++ A M G ++ AS + L
Sbjct: 108 ISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD 167
Query: 60 QANY 63
Y
Sbjct: 168 HYAY 171
Score = 57.5 bits (140), Expect = 5e-11
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
V+L ++ A M G ++ AS + L Y
Sbjct: 125 TIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC 172
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 72.2 bits (178), Expect = 2e-16
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I R D W+ V V++ G F SRA M + G +V S SG + N Q
Sbjct: 95 IARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ 154
Query: 61 --ANY 63
++Y
Sbjct: 155 FASSY 159
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYS 132
V V++ G F SRA M + G +V S SG + N Q ++Y
Sbjct: 112 VMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYM 160
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 72.2 bits (178), Expect = 3e-16
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+ + ++ V ++L G F M++Q G +V TAS G+ G Q+
Sbjct: 105 KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSG 164
Query: 63 Y 63
Y
Sbjct: 165 Y 165
Score = 61.8 bits (151), Expect = 2e-12
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V ++L G F M++Q G +V TAS G+ G Q+ Y+
Sbjct: 120 VVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA 166
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 71.8 bits (177), Expect = 3e-16
Identities = 9/59 (15%), Positives = 24/59 (40%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ ++ W + V++ +++A P M+K+ G +++ +S Y
Sbjct: 106 GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPY 164
Score = 63.3 bits (155), Expect = 4e-13
Identities = 8/47 (17%), Positives = 21/47 (44%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V++ +++A P M+K+ G +++ +S Y+
Sbjct: 119 ILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYN 165
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 71.8 bits (177), Expect = 4e-16
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSG------ 53
+ K ++ D+ V DV++ G F RA +KQ G +V+T+S S
Sbjct: 102 VSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS 161
Query: 54 -LLGNFGQANY 63
L G+ Q Y
Sbjct: 162 SLNGSLTQVFY 172
Score = 58.3 bits (142), Expect = 3e-11
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 86 VQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSG-------LLGNFGQANYS 132
V DV++ G F RA +KQ G +V+T+S S L G+ Q Y+
Sbjct: 119 VYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN 173
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 71.4 bits (176), Expect = 5e-16
Identities = 12/63 (19%), Positives = 24/63 (38%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ I + W + V++ G F S+ P M++ G ++ T S + +
Sbjct: 111 FGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADR 170
Query: 61 ANY 63
Y
Sbjct: 171 TAY 173
Score = 59.5 bits (145), Expect = 1e-11
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V++ G F S+ P M++ G ++ T S + + Y
Sbjct: 128 IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYV 174
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 71.0 bits (175), Expect = 6e-16
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 ILRDKS-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
+L D + + WQ V V++ F +++A P + K + G LV T+S+ G G
Sbjct: 102 LLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN 161
Query: 60 QANY 63
Y
Sbjct: 162 WGAY 165
Score = 61.4 bits (150), Expect = 2e-12
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V++ F +++A P + K + G LV T+S+ G G Y+
Sbjct: 120 VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA 166
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 71.1 bits (175), Expect = 6e-16
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 11 SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRL---VMTASNSGLLGNFGQANY 63
++ +W+ ++L + +M KQN G + +S +GL+ Q Y
Sbjct: 98 NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY 153
Score = 64.2 bits (157), Expect = 2e-13
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRL---VMTASNSGLLGNFGQANYS 132
+ ++L + +M KQN G + +S +GL+ Q Y
Sbjct: 103 EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC 154
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 71.0 bits (175), Expect = 7e-16
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I + W+ + DV++ G++ +++ P M +G ++ AS
Sbjct: 91 IEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA 150
Query: 61 ANY 63
A Y
Sbjct: 151 AAY 153
Score = 58.7 bits (143), Expect = 2e-11
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ DV++ G++ +++ P M +G ++ AS A Y
Sbjct: 108 IIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYV 154
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 70.6 bits (174), Expect = 7e-16
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 1 ILRDKSFARISDT---DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN 57
I + + T + V V++ G F RA PHM Q G +V AS + L+
Sbjct: 90 ITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF 149
Query: 58 FGQANY 63
G++ Y
Sbjct: 150 PGRSAY 155
Score = 61.3 bits (150), Expect = 2e-12
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V++ G F RA PHM Q G +V AS + L+ G++ Y+
Sbjct: 110 VMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYT 156
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 71.2 bits (175), Expect = 7e-16
Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-G 59
+ S + + L+ + + G + VS++ PHMK ++ ++ + L +
Sbjct: 103 AINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR 162
Query: 60 QANY 63
Y
Sbjct: 163 PTPY 166
Score = 59.2 bits (144), Expect = 1e-11
Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYS 132
L+ + + G + VS++ PHMK ++ ++ + L + Y
Sbjct: 118 DLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYM 167
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 70.6 bits (174), Expect = 8e-16
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
IL + + T+WQ + DV+LTG F RA MK+ G ++ +S GL G
Sbjct: 91 ILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC 150
Query: 61 ANY 63
Y
Sbjct: 151 HGY 153
Score = 57.9 bits (141), Expect = 4e-11
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
Q + DV+LTG F RA MK+ G ++ +S GL G Y+
Sbjct: 106 QRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT 154
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 71.0 bits (175), Expect = 9e-16
Identities = 10/57 (17%), Positives = 21/57 (36%)
Query: 7 FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
++ W+ D+++ G V + A M + G V +S + + Y
Sbjct: 108 ITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY 164
Score = 62.6 bits (153), Expect = 1e-12
Identities = 9/47 (19%), Positives = 17/47 (36%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D+++ G V + A M + G V +S + + Y
Sbjct: 119 TVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYG 165
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 70.6 bits (174), Expect = 1e-15
Identities = 10/61 (16%), Positives = 20/61 (32%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
D +++ W V+ G + + A P + G +V +S +
Sbjct: 99 ADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTA 158
Query: 63 Y 63
Y
Sbjct: 159 Y 159
Score = 59.8 bits (146), Expect = 7e-12
Identities = 8/47 (17%), Positives = 16/47 (34%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V+ G + + A P + G +V +S + Y+
Sbjct: 114 TFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYA 160
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 69.5 bits (171), Expect = 2e-15
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 9 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANY 63
+ W + V L G + S KK G L++T+S SG + N QA Y
Sbjct: 131 VDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY 187
Score = 64.5 bits (158), Expect = 2e-13
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANYS 132
+ V L G + S KK G L++T+S SG + N QA Y+
Sbjct: 140 IISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYN 188
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 69.1 bits (170), Expect = 3e-15
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-G 59
++ K+ A + + W V DV+LT F ++ A P M K G +V +S +G G G
Sbjct: 97 LIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPG 154
Query: 60 QANY 63
Y
Sbjct: 155 ALAY 158
Score = 52.9 bits (128), Expect = 3e-09
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYS 132
V DV+LT F ++ A P M K G +V +S +G G G Y+
Sbjct: 114 VLDVNLTSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYA 159
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 69.1 bits (170), Expect = 4e-15
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
I+ ++ + ++Q +QD ++TG F ++AA M Q G ++ TAS SG + N
Sbjct: 119 IVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP 178
Query: 60 Q--ANY 63
Q ++Y
Sbjct: 179 QQVSHY 184
Score = 57.2 bits (139), Expect = 7e-11
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQ--ANYS 132
+QD ++TG F ++AA M Q G ++ TAS SG + N Q ++Y
Sbjct: 136 IQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYC 185
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 68.7 bits (169), Expect = 4e-15
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
IL S I + V D+++ + + ++K +V S+ +
Sbjct: 80 ILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNS 137
Query: 61 ANY 63
Y
Sbjct: 138 FAY 140
Score = 54.1 bits (131), Expect = 9e-10
Identities = 6/47 (12%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D+++ + + ++K +V S+ + Y+
Sbjct: 97 VLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYT 141
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 68.4 bits (168), Expect = 6e-15
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 1 ILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
+L ++ I W+ + D++ + A P +KK N G +V +S++ +
Sbjct: 88 VLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSS 146
Query: 60 QANY 63
Y
Sbjct: 147 WGAY 150
Score = 57.3 bits (139), Expect = 6e-11
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D++ + A P +KK N G +V +S++ + Y
Sbjct: 108 DINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYG 151
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 67.9 bits (167), Expect = 8e-15
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
+S W V ++ L G F S+A + ++ G ++ + G
Sbjct: 93 GNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG 152
Query: 60 QANY 63
+
Sbjct: 153 VIHS 156
Score = 55.6 bits (135), Expect = 3e-10
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V ++ L G F S+A + ++ G ++ + G + +
Sbjct: 110 VINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSA 157
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 68.0 bits (167), Expect = 1e-14
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 1 ILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNF 58
I + + S+ DW + D++L G ++ +A PHM G +++T+S GL
Sbjct: 114 IGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYP 173
Query: 59 GQANY 63
+Y
Sbjct: 174 HTGHY 178
Score = 59.1 bits (144), Expect = 2e-11
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYS 132
+ D++L G ++ +A PHM G +++T+S GL +Y
Sbjct: 130 TEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYV 179
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 67.6 bits (166), Expect = 1e-14
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I+ + A D + V V+L G F R A + + GR++ +++ L +
Sbjct: 115 IMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSY 172
Query: 61 ANY 63
Y
Sbjct: 173 GIY 175
Score = 51.4 bits (124), Expect = 8e-09
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V V+L G F R A + + GR++ +++ L + Y+
Sbjct: 132 VIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYA 176
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 67.7 bits (166), Expect = 2e-14
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
IS W V + +LTG F + +A + K++ G +V G
Sbjct: 110 GQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLA 168
Query: 61 ANY 63
+
Sbjct: 169 VHS 171
Score = 53.4 bits (129), Expect = 2e-09
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V + +LTG F + +A + K++ G +V G +
Sbjct: 127 VLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSG 172
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 66.9 bits (164), Expect = 2e-14
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQANY 63
+ D + ++ TG + A K+ G + S +G Y
Sbjct: 95 LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY 151
Score = 61.1 bits (149), Expect = 3e-12
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Query: 78 VLNVEQ-QLVQDVHLTGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQANYS 132
+L+ Q + ++ TG + A K+ G + S +G YS
Sbjct: 94 ILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 67.1 bits (165), Expect = 2e-14
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
I K + +WQ V D +LT AF VSR+A M +N G+++ S +
Sbjct: 96 IQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT 155
Query: 60 QANY 63
A Y
Sbjct: 156 VAPY 159
Score = 53.6 bits (130), Expect = 1e-09
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V D +LT AF VSR+A M +N G+++ S + A Y+
Sbjct: 113 VIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 66.9 bits (164), Expect = 2e-14
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANY 63
++ W+ V D +LTG F ++ A+ MK Q GR++ S S A Y
Sbjct: 118 PMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPY 177
Score = 58.8 bits (143), Expect = 2e-11
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYS 132
V D +LTG F ++ A+ MK Q GR++ S S A Y+
Sbjct: 130 VVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT 178
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 67.5 bits (165), Expect = 2e-14
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-- 58
+ + L+ +V+ G + S+A P++KK ++ + L +
Sbjct: 139 AISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK 198
Query: 59 GQANY 63
Y
Sbjct: 199 QHCAY 203
Score = 55.6 bits (134), Expect = 3e-10
Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYS 132
L+ +V+ G + S+A P++KK ++ + L + Y+
Sbjct: 154 DLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYT 204
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 66.3 bits (163), Expect = 2e-14
Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
+ + F ++ + +V+L +VS+ + + G +V +S
Sbjct: 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN 145
Query: 60 QANY 63
+ Y
Sbjct: 146 HSVY 149
Score = 52.9 bits (128), Expect = 2e-09
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
+V+L +VS+ + + G +V +S + Y
Sbjct: 103 SFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYC 150
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 66.4 bits (163), Expect = 3e-14
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ K S+ ++ + ++ A+ + A HM G ++ A++
Sbjct: 101 KVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFY 158
Query: 61 ANY 63
+ Y
Sbjct: 159 STY 161
Score = 49.8 bits (120), Expect = 3e-08
Identities = 7/47 (14%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ ++ A+ + A HM G ++ A++ + Y+
Sbjct: 118 MDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYSTYA 162
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 66.4 bits (163), Expect = 3e-14
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ D S + D +++ + ++++ + + + MK Q G + AS + G
Sbjct: 97 MFMDGSLSEPVD-NFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADG 155
Query: 61 ANY 63
Y
Sbjct: 156 GIY 158
Score = 59.9 bits (146), Expect = 8e-12
Identities = 8/45 (17%), Positives = 17/45 (37%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++++ + + + MK Q G + AS + G Y
Sbjct: 115 EINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG 159
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 66.0 bits (162), Expect = 4e-14
Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFG 59
I R +++ V +V+L G + V R A+ +++ + ++ S +
Sbjct: 109 INRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN 168
Query: 60 QANY 63
+ Y
Sbjct: 169 ISAY 172
Score = 53.3 bits (129), Expect = 2e-09
Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYS 132
V +V+L G + V R A+ +++ + ++ S + + Y+
Sbjct: 126 VIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA 173
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 66.0 bits (162), Expect = 4e-14
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ + F ++S+ + V+ GAF + P +++ G +V T+S + G+ G
Sbjct: 92 VSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGM 149
Query: 61 ANY 63
+ Y
Sbjct: 150 SVY 152
Score = 52.5 bits (127), Expect = 4e-09
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V+ GAF + P +++ G +V T+S + G+ G + YS
Sbjct: 109 QFAVNTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGMSVYS 153
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 66.1 bits (162), Expect = 4e-14
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG----NFGQAN 62
D W V DV+LTG + + A P + KQ G +V+ +S++GL G + G
Sbjct: 115 MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVG 174
Query: 63 Y 63
Y
Sbjct: 175 Y 175
Score = 57.2 bits (139), Expect = 7e-11
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG----NFGQANYS 132
V DV+LTG + + A P + KQ G +V+ +S++GL G + G Y
Sbjct: 123 HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYV 176
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 66.1 bits (162), Expect = 5e-14
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+S ++ V D+ +G F VSR + + + G +V + G G Q +
Sbjct: 117 FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVH 176
Query: 63 Y 63
Sbjct: 177 A 177
Score = 55.7 bits (135), Expect = 3e-10
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V D+ +G F VSR + + + G +V + G G Q +
Sbjct: 132 VMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAG 178
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 65.7 bits (161), Expect = 7e-14
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 11 SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
D + + V++ G +A P + G +V T SN+G N G Y
Sbjct: 104 IDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY 155
Score = 61.5 bits (150), Expect = 2e-12
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ V++ G +A P + G +V T SN+G N G Y+
Sbjct: 111 IFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYT 156
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 65.2 bits (160), Expect = 8e-14
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
++ + F ++ + V+L F+VS+ M + G +V +S +
Sbjct: 86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN 145
Query: 60 QANY 63
Y
Sbjct: 146 LITY 149
Score = 51.3 bits (124), Expect = 8e-09
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V+L F+VS+ M + G +V +S + YS
Sbjct: 103 SFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS 150
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 65.4 bits (160), Expect = 8e-14
Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ + + + D++L AF + + + G V+T +++ L G Y
Sbjct: 102 NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAY 158
Score = 56.5 bits (137), Expect = 1e-10
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + D++L AF + + + G V+T +++ L G Y
Sbjct: 113 KGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYG 159
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 64.2 bits (157), Expect = 2e-13
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFG 59
+ ++ + V +++ G F V++ H + GR+++T+S + + G
Sbjct: 109 MEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPN 166
Query: 60 QANY 63
A Y
Sbjct: 167 HALY 170
Score = 49.1 bits (118), Expect = 5e-08
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYS 132
V +++ G F V++ H + GR+++T+S + + G A Y+
Sbjct: 126 VFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYA 171
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 63.4 bits (155), Expect = 4e-13
Identities = 9/68 (13%), Positives = 20/68 (29%), Gaps = 6/68 (8%)
Query: 1 ILRDKSFARISD----TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLL 55
+F + ++L +++ PH+ G +V +S +G
Sbjct: 96 AAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQ 154
Query: 56 GNFGQANY 63
Y
Sbjct: 155 AQPDFLYY 162
Score = 54.9 bits (133), Expect = 5e-10
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYS 132
++L +++ PH+ G +V +S +G Y+
Sbjct: 117 TLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDFLYYA 163
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 63.3 bits (155), Expect = 4e-13
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVM----TASNSGLLGNF 58
+ ++ + ++ + V++ G + ++ PH K+ AS
Sbjct: 96 KPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP 155
Query: 59 GQANY 63
A Y
Sbjct: 156 NLAWY 160
Score = 53.7 bits (130), Expect = 1e-09
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVM----TASNSGLLGNFGQANYS 132
+ V++ G + ++ PH K+ AS A Y+
Sbjct: 111 IVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN 161
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 63.5 bits (155), Expect = 5e-13
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFG 59
I+ A+++ DW+ V D+ L G+ A P + +Q G + TAS +GL+ N G
Sbjct: 118 IVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG 177
Query: 60 QANY 63
Y
Sbjct: 178 LGTY 181
Score = 53.1 bits (128), Expect = 3e-09
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYS 132
V D+ L G+ A P + +Q G + TAS +GL+ N G Y
Sbjct: 135 VIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYG 182
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 62.6 bits (153), Expect = 8e-13
Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 13/67 (19%)
Query: 8 ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--------- 58
A + + DV G AA P++ ++ T S +GL+
Sbjct: 114 AHLPVQAFADAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQ 171
Query: 59 --GQANY 63
G A Y
Sbjct: 172 GPGGAGY 178
Score = 53.8 bits (130), Expect = 1e-09
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 13/60 (21%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-----------GQANYS 132
DV G AA P++ ++ T S +GL+ G A YS
Sbjct: 122 ADAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYS 179
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 62.7 bits (153), Expect = 8e-13
Identities = 7/66 (10%), Positives = 17/66 (25%), Gaps = 6/66 (9%)
Query: 4 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK------KQNYGRLVMTASNSGLLGN 57
D S + +T + + F ++ + K + +V
Sbjct: 129 DNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC 188
Query: 58 FGQANY 63
+ Y
Sbjct: 189 MAFSLY 194
Score = 54.2 bits (131), Expect = 9e-10
Identities = 4/53 (7%), Positives = 13/53 (24%), Gaps = 6/53 (11%)
Query: 86 VQDVHLTGAFRVSRAAWPHMK------KQNYGRLVMTASNSGLLGNFGQANYS 132
+ + F ++ + K + +V + Y+
Sbjct: 143 LIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 195
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 62.5 bits (153), Expect = 8e-13
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFG 59
I +KS + +W+ + V+L G F +R MK + G ++ +S G +G+
Sbjct: 92 IAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS 151
Query: 60 QANY 63
Y
Sbjct: 152 LGAY 155
Score = 50.6 bits (122), Expect = 1e-08
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYS 132
+ + V+L G F +R MK + G ++ +S G +G+ Y+
Sbjct: 107 RKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN 156
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 62.6 bits (153), Expect = 9e-13
Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQA 61
+ +Q ++ +++ H+ K G +V +S +G + G
Sbjct: 120 DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYP 178
Query: 62 NY 63
Y
Sbjct: 179 YY 180
Score = 54.5 bits (132), Expect = 8e-10
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYS 132
++ +++ H+ K G +V +S +G + G Y+
Sbjct: 135 TFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA 181
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 62.6 bits (153), Expect = 9e-13
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQA 61
+ +S W+ D +LT AF ++ P + G L T+S G G G A
Sbjct: 98 AMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVA 157
Query: 62 NY 63
Y
Sbjct: 158 PY 159
Score = 52.9 bits (128), Expect = 3e-09
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQANYS 132
D +LT AF ++ P + G L T+S G G G A Y+
Sbjct: 113 TLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA 160
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 62.2 bits (152), Expect = 1e-12
Identities = 6/63 (9%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++ ++ + VH+ + ++ P + +V + + G+
Sbjct: 109 EWLAETP-GEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH 167
Query: 61 ANY 63
Y
Sbjct: 168 IAY 170
Score = 56.4 bits (137), Expect = 1e-10
Identities = 6/45 (13%), Positives = 15/45 (33%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
VH+ + ++ P + +V + + G+ Y
Sbjct: 127 SVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC 171
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 62.2 bits (152), Expect = 1e-12
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFG 59
I + D+ V V+ F R+A H+ GR++ SN + L+ G
Sbjct: 119 IWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG--GRIITIGSNLAELVPWPG 176
Query: 60 QANY 63
+ Y
Sbjct: 177 ISLY 180
Score = 47.2 bits (113), Expect = 3e-07
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYS 132
V V+ F R+A H+ GR++ SN + L+ G + YS
Sbjct: 136 VMAVNFRAPFVAIRSASRHLGDG--GRIITIGSNLAELVPWPGISLYS 181
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 61.9 bits (151), Expect = 2e-12
Identities = 8/64 (12%), Positives = 15/64 (23%), Gaps = 5/64 (7%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK-----KQNYGRLVMTASNSGLLGNFG 59
+ A+ D + + + RA + +V L G
Sbjct: 119 AADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPG 178
Query: 60 QANY 63
Y
Sbjct: 179 FCVY 182
Score = 52.6 bits (127), Expect = 3e-09
Identities = 6/52 (11%), Positives = 12/52 (23%), Gaps = 5/52 (9%)
Query: 86 VQDVHLTGAFRVSRAAWPHMK-----KQNYGRLVMTASNSGLLGNFGQANYS 132
+ + + RA + +V L G Y+
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 61.5 bits (150), Expect = 2e-12
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-G 59
++ ++ ++ V ++ G F V+R A+ H+ + GRL++ S +G
Sbjct: 117 VVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPK 174
Query: 60 QANY 63
A Y
Sbjct: 175 HAVY 178
Score = 46.8 bits (112), Expect = 4e-07
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYS 132
++ G F V+R A+ H+ + GRL++ S +G A YS
Sbjct: 136 TINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYS 179
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 60.6 bits (148), Expect = 4e-12
Identities = 11/61 (18%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+ S ++ + +++L G + +++ A P+++K G ++ +S G +G
Sbjct: 95 PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVP 153
Query: 63 Y 63
Y
Sbjct: 154 Y 154
Score = 51.0 bits (123), Expect = 1e-08
Identities = 10/49 (20%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + +++L G + +++ A P+++K G ++ +S G +G Y
Sbjct: 108 RQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYV 155
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 60.3 bits (147), Expect = 5e-12
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ RD + S +W D+++ +SR P + + G ++ S +G + G
Sbjct: 85 VARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPAL-RAASGCVIYINSGAGNGPHPGN 143
Query: 61 ANY-------RFLSQQL-LEWCETNV 78
Y R L+ E +
Sbjct: 144 TIYAASKHALRGLADAFRKEEANNGI 169
Score = 49.1 bits (118), Expect = 5e-08
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D+++ +SR P + + G ++ S +G + G Y+
Sbjct: 104 DLNVIVPAELSRQLLPAL-RAASGCVIYINSGAGNGPHPGNTIYA 147
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 59.9 bits (146), Expect = 1e-11
Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQA 61
+ K+ S + +++L +++ A PH+ G +V +S SGL
Sbjct: 102 QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLHATPDFP 160
Query: 62 NY 63
Y
Sbjct: 161 YY 162
Score = 50.3 bits (121), Expect = 2e-08
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYS 132
+++L +++ A PH+ G +V +S SGL YS
Sbjct: 117 TLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLHATPDFPYYS 163
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 59.5 bits (145), Expect = 1e-11
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 1 ILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGLLG 56
I+ + +S + + V++TG+ + A M + G +V +S + +LG
Sbjct: 114 IVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG 173
Query: 57 NFGQ-ANY 63
+ Q +Y
Sbjct: 174 SATQYVDY 181
Score = 48.3 bits (116), Expect = 1e-07
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGLLGNFGQ-ANYS 132
+ V++TG+ + A M + G +V +S + +LG+ Q +Y+
Sbjct: 132 MLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA 182
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 59.1 bits (144), Expect = 1e-11
Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ + V + +L V++ + ++ G L S++ +G +
Sbjct: 87 TGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANE 145
Query: 61 ANY 63
+ Y
Sbjct: 146 SLY 148
Score = 49.1 bits (118), Expect = 4e-08
Identities = 7/45 (15%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ +L V++ + ++ G L S++ +G ++ Y
Sbjct: 106 ESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYC 149
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 59.0 bits (144), Expect = 1e-11
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
IL D+ + ++ F + MK+ G ++ AS S L
Sbjct: 90 ILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQY 148
Query: 61 ANY 63
A Y
Sbjct: 149 AGY 151
Score = 48.6 bits (117), Expect = 8e-08
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ ++ F + MK+ G ++ AS S L A YS
Sbjct: 105 SRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYS 152
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 59.2 bits (144), Expect = 2e-11
Identities = 14/63 (22%), Positives = 26/63 (41%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++ D + +V++ F ++A P M K N+G +V AS +G +
Sbjct: 118 VVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL 177
Query: 61 ANY 63
Y
Sbjct: 178 LAY 180
Score = 48.8 bits (117), Expect = 7e-08
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ +V++ F ++A P M K N+G +V AS +G + Y
Sbjct: 133 EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC 181
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 58.4 bits (142), Expect = 2e-11
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGL 54
K + D+Q V DV+L G F V R M + G ++ TAS +
Sbjct: 102 TYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF 161
Query: 55 LGNFGQANY 63
G GQA Y
Sbjct: 162 EGQVGQAAY 170
Score = 56.1 bits (136), Expect = 2e-10
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYS 132
Q V DV+L G F V R M + G ++ TAS + G GQA YS
Sbjct: 117 QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS 171
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 58.5 bits (142), Expect = 3e-11
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANY 63
+ D++L G + V+R + G LV+TAS +G G GQ Y
Sbjct: 132 GFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAY 187
Score = 55.4 bits (134), Expect = 4e-10
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYS 132
D++L G + V+R + G LV+TAS +G G GQ Y+
Sbjct: 134 TKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYA 188
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 58.1 bits (141), Expect = 3e-11
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+ ++ + L+ + + S A H+K+ G L + + + L G G
Sbjct: 87 WAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGM 144
Query: 61 ANY 63
Y
Sbjct: 145 IGY 147
Score = 49.2 bits (118), Expect = 5e-08
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
L+ + + S A H+K+ G L + + + L G G Y
Sbjct: 102 DLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYG 148
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 57.9 bits (141), Expect = 4e-11
Identities = 7/63 (11%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
I ++ + + V+ F + + A + ++ R++ +S + +
Sbjct: 101 IGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDF 158
Query: 61 ANY 63
Y
Sbjct: 159 IAY 161
Score = 44.8 bits (107), Expect = 2e-06
Identities = 7/45 (15%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V+ F + + A + ++ R++ +S + + YS
Sbjct: 120 SVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYS 162
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 58.0 bits (141), Expect = 4e-11
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFG 59
++ +++ ++ V ++ G F V+R A+ H+ + GR+V+T+S S
Sbjct: 106 VVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPK 163
Query: 60 QANY 63
+ Y
Sbjct: 164 HSLY 167
Score = 44.1 bits (105), Expect = 3e-06
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYS 132
V ++ G F V+R A+ H+ + GR+V+T+S S + YS
Sbjct: 123 VFSLNTRGQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLYS 168
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 57.9 bits (141), Expect = 5e-11
Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+++ + D ++ G + A P + + +V+T S +G G
Sbjct: 113 GGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAF 170
Query: 61 ANY 63
+ Y
Sbjct: 171 SVY 173
Score = 47.5 bits (114), Expect = 2e-07
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D ++ G + A P + + +V+T S +G G + Y+
Sbjct: 130 TFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYA 174
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 58.1 bits (141), Expect = 5e-11
Identities = 4/83 (4%), Positives = 15/83 (18%), Gaps = 20/83 (24%)
Query: 1 ILRDKSFARISDTDWQL--------------VQDVHLTGAFRVSRAAWPHM------KKQ 40
R + + + + + + +A + +
Sbjct: 115 SFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG 174
Query: 41 NYGRLVMTASNSGLLGNFGQANY 63
++ G Y
Sbjct: 175 TNYSIINMVDAMTNQPLLGYTIY 197
Score = 51.2 bits (123), Expect = 1e-08
Identities = 3/53 (5%), Positives = 13/53 (24%), Gaps = 6/53 (11%)
Query: 86 VQDVHLTGAFRVSRAAWPHM------KKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + + + +A + + ++ G Y+
Sbjct: 146 LFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 198
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 57.6 bits (140), Expect = 5e-11
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANY 63
+ V+L G F + R A M + G +V TAS + G GQA Y
Sbjct: 108 SFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY 163
Score = 54.9 bits (133), Expect = 4e-10
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYS 132
V+L G F + R A M + G +V TAS + G GQA Y+
Sbjct: 110 ARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYA 164
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 57.6 bits (140), Expect = 6e-11
Identities = 10/62 (16%), Positives = 15/62 (24%), Gaps = 1/62 (1%)
Query: 2 LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA 61
L D +S V A + A P ++ G + G
Sbjct: 93 LLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ-THL 151
Query: 62 NY 63
Y
Sbjct: 152 AY 153
Score = 53.8 bits (130), Expect = 1e-09
Identities = 11/123 (8%), Positives = 23/123 (18%), Gaps = 42/123 (34%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQ 69
++ + LV V+ G + + +
Sbjct: 74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPA------------------------- 108
Query: 70 LLEWCETNVLNVEQQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA 129
V A + A P ++ G + G
Sbjct: 109 ----------------AVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ-THL 151
Query: 130 NYS 132
Y+
Sbjct: 152 AYA 154
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 57.8 bits (140), Expect = 6e-11
Identities = 4/83 (4%), Positives = 15/83 (18%), Gaps = 20/83 (24%)
Query: 1 ILRDKSFARISDTDWQL--------------VQDVHLTGAFRVSRAAWPHM------KKQ 40
R + + + + + + +A + +
Sbjct: 152 SFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG 211
Query: 41 NYGRLVMTASNSGLLGNFGQANY 63
++ G Y
Sbjct: 212 TNYSIINMVDAMTNQPLLGYTIY 234
Score = 51.3 bits (123), Expect = 1e-08
Identities = 3/53 (5%), Positives = 13/53 (24%), Gaps = 6/53 (11%)
Query: 86 VQDVHLTGAFRVSRAAWPHM------KKQNYGRLVMTASNSGLLGNFGQANYS 132
+ + + + +A + + ++ G Y+
Sbjct: 183 LFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 235
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 56.9 bits (138), Expect = 9e-11
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANY 63
++ V +V+L G F V R A M++ G +V TAS + G GQA Y
Sbjct: 93 SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148
Score = 54.2 bits (131), Expect = 7e-10
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYS 132
+ V +V+L G F V R A M++ G +V TAS + G GQA Y+
Sbjct: 95 RRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA 149
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 56.1 bits (136), Expect = 1e-10
Identities = 5/63 (7%), Positives = 13/63 (20%), Gaps = 2/63 (3%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
++ + L G + + + G +T
Sbjct: 68 SATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQG 125
Query: 61 ANY 63
A+
Sbjct: 126 ASA 128
Score = 45.0 bits (107), Expect = 1e-06
Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 3/52 (5%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGAL 139
L G + + + G +T A+ + +A GA+
Sbjct: 87 SSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAA-MANGAV 135
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 56.5 bits (137), Expect = 1e-10
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQA 61
R+S W+ + D+ L G V+ + K Q + + G+
Sbjct: 116 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVV 175
Query: 62 NY 63
Sbjct: 176 PS 177
Score = 46.4 bits (111), Expect = 4e-07
Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 86 VQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYS 132
+ D+ L G V+ + K Q + + G+ +
Sbjct: 131 ITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 56.4 bits (137), Expect = 2e-10
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK----QNYGRLVMTASNSGLLG 56
+ + W+ V +++T F + P +++ +N R++ S +G+
Sbjct: 115 TSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA 174
Query: 57 NFGQA-NY 63
QA Y
Sbjct: 175 MGEQAYAY 182
Score = 44.1 bits (105), Expect = 3e-06
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKK----QNYGRLVMTASNSGLLGNFGQA-NYS 132
V +++T F + P +++ +N R++ S +G+ QA Y
Sbjct: 132 VMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYG 183
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 55.7 bits (135), Expect = 2e-10
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKK--------QNYGRLVMTASNSGLLGNFGQANY 63
++ + D++L G+F V R A + K + G ++ TAS + G GQA Y
Sbjct: 106 AFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAY 163
Score = 53.4 bits (129), Expect = 2e-09
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKK--------QNYGRLVMTASNSGLLGNFGQANYS 132
+ + D++L G+F V R A + K + G ++ TAS + G GQA YS
Sbjct: 108 RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYS 164
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 54.9 bits (133), Expect = 6e-10
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
+ I+ + +++ F V++AA H+K+ ++ TAS GN +
Sbjct: 138 PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLID 195
Query: 63 Y-----------RFLSQQLLE 72
Y R LSQ L++
Sbjct: 196 YSATKGAIVAFTRSLSQSLVQ 216
Score = 41.8 bits (99), Expect = 2e-05
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+++ F V++AA H+K+ ++ TAS GN +YS
Sbjct: 155 RINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYS 197
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 53.7 bits (130), Expect = 1e-09
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
S + D++ V D+++ GAF V++ A M G +V TAS S G ++
Sbjct: 106 TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSH 165
Score = 45.6 bits (109), Expect = 9e-07
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN-YS 132
+ V D+++ GAF V++ A M G +V TAS S G ++ Y+
Sbjct: 119 KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT 168
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 53.1 bits (128), Expect = 2e-09
Identities = 8/59 (13%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ ++ + L+ + + ++ A H+K G L +T + + + Y
Sbjct: 87 SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGY 143
Score = 46.5 bits (111), Expect = 4e-07
Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
L+ + + ++ A H+K G L +T + + + Y
Sbjct: 98 DLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYG 144
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 49.9 bits (120), Expect = 2e-08
Identities = 11/61 (18%), Positives = 16/61 (26%), Gaps = 4/61 (6%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
S + + HL A H + Q R V + + G A
Sbjct: 78 GRASVREAGRDLVEEMLAAHLLTA----AFVLKHARFQKGARAVFFGAYPRYVQVPGFAA 133
Query: 63 Y 63
Y
Sbjct: 134 Y 134
Score = 42.5 bits (101), Expect = 8e-06
Identities = 10/45 (22%), Positives = 14/45 (31%), Gaps = 4/45 (8%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
HL A H + Q R V + + G A Y+
Sbjct: 95 AAHLLTA----AFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYA 135
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 50.0 bits (120), Expect = 3e-08
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Query: 1 ILRDKSFARISDTD---WQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLL 55
L D S ++ D ++LT ++ + +V +S L
Sbjct: 102 TLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161
Query: 56 GNFGQANY 63
G Y
Sbjct: 162 PYKGWGLY 169
Score = 42.0 bits (99), Expect = 2e-05
Identities = 7/47 (14%), Positives = 14/47 (29%), Gaps = 2/47 (4%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYS 132
++LT ++ + +V +S L G Y
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYC 170
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 49.5 bits (119), Expect = 4e-08
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 13/81 (16%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN 62
++ +Q V++ F +++ A P + K ++ T+S + +
Sbjct: 141 AIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLD 198
Query: 63 Y-----------RFLSQQLLE 72
Y R L++Q+ E
Sbjct: 199 YAATKAAILNYSRGLAKQVAE 219
Score = 39.5 bits (93), Expect = 1e-04
Identities = 8/45 (17%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
V++ F +++ A P + K ++ T+S + +Y+
Sbjct: 158 AVNVFALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYA 200
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 48.5 bits (116), Expect = 8e-08
Identities = 11/51 (21%), Positives = 19/51 (37%)
Query: 11 SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA 61
V V+ GA + A P +KK + V+ +S + F +
Sbjct: 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKN 125
Score = 45.0 bits (107), Expect = 1e-06
Identities = 12/63 (19%), Positives = 23/63 (36%)
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSFLAGGALKIER 143
V V+ GA + A P +KK + V+ +S + F + + + +
Sbjct: 80 GNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA 139
Query: 144 SVI 146
I
Sbjct: 140 RAI 142
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 9/81 (11%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-- 63
Q + + +L+ A V R K Q +VM S + ++ Y
Sbjct: 87 LLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCA 145
Query: 64 -----RFLSQQL-LEWCETNV 78
+ L + + LE +
Sbjct: 146 VKWAVKGLIESVRLELKGKPM 166
Score = 39.5 bits (93), Expect = 1e-04
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+ +L+ A V R K Q +VM S + ++ Y
Sbjct: 101 ENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYC 144
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 46.6 bits (111), Expect = 5e-07
Identities = 16/64 (25%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK------QNYGRLVMTASNSGLLGNFG 59
S DW + V+L G P M + Q G +V TAS + L
Sbjct: 102 PIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS 161
Query: 60 QANY 63
Y
Sbjct: 162 PGIY 165
Score = 39.7 bits (93), Expect = 1e-04
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Query: 86 VQDVHLTGAFRVSRAAWPHMKK------QNYGRLVMTASNSGLLGNFGQANYS 132
+ V+L G P M + Q G +V TAS + L Y+
Sbjct: 114 LLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYN 166
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 46.5 bits (111), Expect = 5e-07
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
++ + + + ++H+ G R++RA P M+++ G +V +S G L G + Y
Sbjct: 98 TTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAY 151
Score = 46.1 bits (110), Expect = 6e-07
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
++H+ G R++RA P M+++ G +V +S G L G + YS
Sbjct: 108 ELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYS 152
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 45.6 bits (109), Expect = 7e-07
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-------RFL 66
+W+LV D +LTGAF R A P + ++ G +V S +G G A Y L
Sbjct: 101 EWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGL 160
Query: 67 SQQL-LEWCETNV 78
+ L+ E NV
Sbjct: 161 AGAAMLDLREANV 173
Score = 40.2 bits (95), Expect = 6e-05
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D +LTGAF R A P + ++ G +V S +G G A Y+
Sbjct: 107 DTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYN 151
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 45.5 bits (108), Expect = 1e-06
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG 59
+ + + D+++ RV+RAA PHM++Q +G L+ +S+S G
Sbjct: 106 FTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP 155
Score = 44.0 bits (104), Expect = 4e-06
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYS 132
D+++ RV+RAA PHM++Q +G L+ +S+S G A Y
Sbjct: 116 DINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYF 161
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 44.1 bits (105), Expect = 3e-06
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG 53
+S+ ++ + +V+L G +R +A +K+ LV T+ S
Sbjct: 95 RLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA 142
Score = 37.1 bits (87), Expect = 7e-04
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG 121
+V+L G +R +A +K+ LV T+ S
Sbjct: 109 EVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA 142
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 44.3 bits (105), Expect = 3e-06
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 10 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ + V DV++ G R+ +A P MK++ GR+++T S GL+G Y
Sbjct: 102 LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVY 155
Score = 43.9 bits (104), Expect = 4e-06
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
DV++ G R+ +A P MK++ GR+++T S GL+G Y
Sbjct: 112 DVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC 156
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 39.8 bits (94), Expect = 9e-05
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-- 63
+ S DW+ + D + G ++RA P M ++N+G ++ S +G G Y
Sbjct: 90 PAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGA 149
Query: 64 -----RFLSQQL-LEWCETNV 78
R S L + T V
Sbjct: 150 TKAFVRQFSLNLRTDLHGTAV 170
Score = 32.9 bits (76), Expect = 0.021
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D + G ++RA P M ++N+G ++ S +G G Y
Sbjct: 104 DTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYG 148
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 39.5 bits (93), Expect = 1e-04
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL 54
+W+ + DV++ G A P M+ Q G+++ S L
Sbjct: 104 EWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGAL 144
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
DV++ G A P M+ Q G+++ S L A Y
Sbjct: 110 DVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYC 154
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 39.1 bits (92), Expect = 1e-04
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-------RFL 66
+WQ + DV++ G +A MK +N G ++ +S +G A Y +
Sbjct: 110 EWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAI 169
Query: 67 SQQL-LEWCETNV 78
S+ + E +NV
Sbjct: 170 SENVREEVAASNV 182
Score = 35.3 bits (82), Expect = 0.004
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
DV++ G +A MK +N G ++ +S +G A Y
Sbjct: 116 DVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYC 160
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 38.8 bits (91), Expect = 2e-04
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-- 63
+I+ D Q V D ++T +++A P + +N G +V S +G + Y
Sbjct: 131 RVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCA 190
Query: 64 -----RFLSQQL-LEWCETNV 78
+ L E T +
Sbjct: 191 SKFAVGAFTDSLRKELINTKI 211
Score = 33.4 bits (77), Expect = 0.014
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D ++T +++A P + +N G +V S +G + Y
Sbjct: 145 DTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC 189
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 39.2 bits (92), Expect = 2e-04
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY 63
+ + +V+ ++ AA P +K+ N G +V+ +S +G + A Y
Sbjct: 121 NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAY 177
Score = 36.5 bits (85), Expect = 0.001
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
+V+ ++ AA P +K+ N G +V+ +S +G + A YS
Sbjct: 135 EVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYS 178
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 38.4 bits (89), Expect = 3e-04
Identities = 12/85 (14%), Positives = 29/85 (34%)
Query: 5 KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYR 64
+ + + ++ G V+ P ++ + R+V +S++G L
Sbjct: 135 QELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETAL 194
Query: 65 FLSQQLLEWCETNVLNVEQQLVQDV 89
+ E + V L++D
Sbjct: 195 EILGDGDALTEERIDMVVNMLLKDF 219
Score = 34.5 bits (79), Expect = 0.006
Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 15/103 (14%)
Query: 39 KQNYGRLVMTASNSGLLG---------------NFGQANYRFLSQQLLEWCETNVLNVEQ 83
K ++G+L + +N+G+ G + ++ +
Sbjct: 86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELA 145
Query: 84 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF 126
+ ++ G V+ P ++ + R+V +S++G L
Sbjct: 146 EECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 34.9 bits (81), Expect = 0.004
Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 9/82 (10%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGR-LVMTASNSGLLGNFGQANY- 63
DW + D ++ G +R P + G +V S +G G Y
Sbjct: 113 PAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYG 172
Query: 64 ------RFLSQQL-LEWCETNV 78
S L + T V
Sbjct: 173 GTKAFVEQFSLNLRCDLQGTGV 194
Score = 29.5 bits (67), Expect = 0.33
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYG 111
D ++ G +R P + G
Sbjct: 127 DTNIKGLLYSTRLLLPRLIAHGAG 150
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 33.8 bits (78), Expect = 0.011
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGR 44
+ R + S + W+ + +V++ +R A+ MK++N
Sbjct: 121 LARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDD 164
Score = 28.4 bits (64), Expect = 0.70
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGR 112
+V++ +R A+ MK++N
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDD 164
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 33.5 bits (77), Expect = 0.017
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ 60
+L D ++ V + GA + P + LV+ +S SG+LG+ GQ
Sbjct: 621 VLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQ 674
Query: 61 ANY 63
NY
Sbjct: 675 GNY 677
Score = 30.8 bits (70), Expect = 0.13
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 114 VMTASNSGLLGNFGQANYS 132
V+ +S SG+LG+ GQ NY+
Sbjct: 660 VLFSSVSGVLGSGGQGNYA 678
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 33.3 bits (77), Expect = 0.018
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 14 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-------RFL 66
DW + D +L G ++RAA PH+ + G +V +S +G + A Y
Sbjct: 107 DWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAF 165
Query: 67 SQQL-LEWCETNV 78
S+ L E E V
Sbjct: 166 SETLRQEVTERGV 178
Score = 29.0 bits (66), Expect = 0.43
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 88 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS 132
D +L G ++RAA PH+ + G +V +S +G + A Y
Sbjct: 113 DTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQ 156
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.1 bits (75), Expect = 0.029
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 22/98 (22%)
Query: 27 FRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQANYRFLSQQLLEWCETNVLNVEQQL 85
+ +AA+ +K + G + A+ +G LG + A L+ +V+++E L
Sbjct: 1737 TLMEKAAFEDLKSK--GLIPADATFAGHSLGEYA-A----LA------SLADVMSIE-SL 1782
Query: 86 VQDVHLTGAFRVSRAAWP--HMKKQNYGRLVMTASNSG 121
V+ V G + A P + + NYG M A N G
Sbjct: 1783 VEVVFYRG--MTMQVAVPRDELGRSNYG---MIAINPG 1815
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.9 bits (74), Expect = 0.032
Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 38/165 (23%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAF----------------RVSRAAWPHMKKQNYGR 44
IL A + + D + VQD+ R W + KQ
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDM-PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE--E 77
Query: 45 LVMTASNSGLLGNFGQANYRFLSQQLLEWCETNVLNVEQ------QLVQDVHLTGAFRVS 98
+V L + NY+FL + + +L D + + VS
Sbjct: 78 MVQKFVEEVL-----RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132
Query: 99 RAAWPHMKKQNYGRLVMTASN---SGLLGNFGQANYSFLAGGALK 140
R P++K + + A N G+LG G+ +++A
Sbjct: 133 RLQ-PYLKLRQALLELRPAKNVLIDGVLG-SGK---TWVALDVCL 172
Score = 30.2 bits (67), Expect = 0.26
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 12/55 (21%)
Query: 36 HMKKQNYGRLVMTASNSGLLGNFGQANYRFLSQQL----LEWCET-NVLNVEQQL 85
H+K + + L ++RFL Q++ W + ++LN QQL
Sbjct: 480 HLKNIEHPERMTLFRMVFL-------DFRFLEQKIRHDSTAWNASGSILNTLQQL 527
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 29.6 bits (67), Expect = 0.34
Identities = 4/37 (10%), Positives = 12/37 (32%)
Query: 3 RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK 39
+ + + + +++A P +KK
Sbjct: 115 KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 151
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2;
short-chain dehydrogenase/reductase, rossman fold; 1.95A
{Streptomyces fradiae}
Length = 511
Score = 29.4 bits (66), Expect = 0.48
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 46 VMTASNSGLLGNFGQANY 63
V+ +S +G GN GQ Y
Sbjct: 387 VLFSSVTGTWGNAGQGAY 404
Score = 29.4 bits (66), Expect = 0.48
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 114 VMTASNSGLLGNFGQANY 131
V+ +S +G GN GQ Y
Sbjct: 387 VLFSSVTGTWGNAGQGAY 404
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 28.9 bits (65), Expect = 0.57
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 114 VMTASNSGLLGNFGQANYSFLAGGA 138
V+ +S + G G Y+ G A
Sbjct: 357 VLFSSFASAFGAPGLGGYA--PGNA 379
Score = 28.9 bits (65), Expect = 0.58
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 46 VMTASNSGLLGNFGQANY 63
V+ +S + G G Y
Sbjct: 357 VLFSSFASAFGAPGLGGY 374
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces
nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Length = 496
Score = 28.9 bits (65), Expect = 0.64
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 114 VMTASNSGLLGNFGQANYS 132
V+ +S + + G+ GQ Y+
Sbjct: 371 VLFSSGAAVWGSGGQPGYA 389
Score = 28.9 bits (65), Expect = 0.64
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 46 VMTASNSGLLGNFGQANY 63
V+ +S + + G+ GQ Y
Sbjct: 371 VLFSSGAAVWGSGGQPGY 388
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase,
epimerization, oxidoreductase; 1.88A {Streptomyces
venezuelae}
Length = 525
Score = 28.6 bits (64), Expect = 0.74
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 46 VMTASNSGLLGNFGQANY 63
V+ +S + + G GQ Y
Sbjct: 398 VLFSSVAAIWGGAGQGAY 415
Score = 28.6 bits (64), Expect = 0.74
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 114 VMTASNSGLLGNFGQANY 131
V+ +S + + G GQ Y
Sbjct: 398 VLFSSVAAIWGGAGQGAY 415
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 28.3 bits (63), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 114 VMTASNSGLLGNFGQANYSFLA 135
V+ +S S GN GQANY F
Sbjct: 2017 VIFSSVSCGRGNAGQANYGFAN 2038
Score = 27.9 bits (62), Expect = 1.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 1 ILRDKSFARISDTDWQLVQDVHLTGAF---RVSRAAWPHMKKQNYGRLVMTASNSGLLGN 57
+LRD + +Q V +G RV+R A P + V+ +S S GN
Sbjct: 1974 VLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELD-----YFVIFSSVSCGRGN 2028
Query: 58 FGQANY 63
GQANY
Sbjct: 2029 AGQANY 2034
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 27.3 bits (61), Expect = 1.6
Identities = 5/34 (14%), Positives = 12/34 (35%)
Query: 6 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK 39
+ + DV+ T +++ P +K
Sbjct: 97 TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKN 130
>2kz6_A Uncharacterized protein; protein of unknown function, structural
genomics, PSI-2, Pro structure initiative; NMR
{Chromobacterium violaceum}
Length = 102
Score = 24.9 bits (54), Expect = 5.9
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 2 LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAW 34
LR + R+ DW VQDV LT +A W
Sbjct: 46 LRIERDERLRACDWTQVQDVVLTAD---QKATW 75
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.133 0.404
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,089,225
Number of extensions: 105728
Number of successful extensions: 660
Number of sequences better than 10.0: 1
Number of HSP's gapped: 482
Number of HSP's successfully gapped: 386
Length of query: 146
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 61
Effective length of database: 4,328,508
Effective search space: 264038988
Effective search space used: 264038988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.0 bits)