BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16223
(153 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 102 bits (254), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG--HLSQITNLELKKRLME 65
PF IQAE T+ TN++G C L PL++ RVVN+SS+ G L++ + EL+++
Sbjct: 101 PFHIQAELTMKTNFMGTRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSP-ELQQKFKS 159
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E +L +M +F++ TK H +GW DS Y V+KIGV++L+RIY +K +
Sbjct: 160 ETITEEELVGLMNKFVEDTKNG--VHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAG 217
Query: 126 QDKVINAVHPGYVATNMSS 144
++NA PG+V T+M
Sbjct: 218 DKILLNACCPGWVRTDMGG 236
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS--SAGHLSQITNLELKK 61
A PF IQAE T+ TN+ G C L PL++ RVVN+SS S L + EL++
Sbjct: 97 ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP-ELQQ 155
Query: 62 RLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC 121
+ + ++E +L +M +F++ TK+ H +GWP SAY V+KIGV +L+RI+ +K
Sbjct: 156 KFRSETITEEELVGLMNKFVEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 213
Query: 122 ELGNQDKVINAVHPGYVATNMSS 144
+ ++NA PG+V T+M+
Sbjct: 214 QRKGDKILLNACCPGWVRTDMAG 236
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS--SAGHLSQITNLELKK 61
A PF IQAE T+ TN+ G L PL++ RVVN+SS S L + EL++
Sbjct: 97 ADPTPFHIQAEVTMKTNFFGTRDVXTELLPLIKPQGRVVNVSSIMSVRALKSCSP-ELQQ 155
Query: 62 RLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC 121
+ + ++E +L +M +F++ TK+ H +GWP SAY V+KIGV +L+RI+ +K
Sbjct: 156 KFRSETITEEELVGLMNKFVEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 213
Query: 122 ELGNQDKVINAVHPGYVATNMSS 144
+ ++NA PG+V T+M+
Sbjct: 214 QRKGDKILLNACCPGWVRTDMAG 236
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 7 VPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS-SAGHLSQITNLELKKRLME 65
+PF I+AE T+ TN+ C L P+++ H RVVN+SS + + +L++R
Sbjct: 98 MPFDIKAEMTLKTNFFATRNMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHS 157
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E L D+M +F++ TK H +GWP+S Y VSK+GV +L+RI ++ D +
Sbjct: 158 ETLTEGDLVDLMKKFVEDTKNE--VHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKA 215
Query: 126 QDKVINAVHPGYVATNMSS 144
++NA PG V T+M
Sbjct: 216 DRILVNACCPGPVKTDMDG 234
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 13 AEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAGHLSQITNLELKKRLME-DCVS 69
AE+ + NY G+ L PLL+ R+VN+SSS G L ++N + L + D ++
Sbjct: 145 AEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALT 204
Query: 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPD--SAYAVSKIGVNLLTRIYQKKFDCELGNQD 127
E ++ ++ + KE+ GWP +AY SK +N TR+ K
Sbjct: 205 EERIDMVVNMLLKDFKENLIE--TNGWPSFGAAYTTSKACLNAYTRVLANKI------PK 256
Query: 128 KVINAVHPGYVATNMSSFMGN 148
+N V PG V T M+ +GN
Sbjct: 257 FQVNCVCPGLVKTEMNYGIGN 277
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 95 GWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
G P A Y+ +K GV LT+ K EL ++ +NAV PG++AT+M+S
Sbjct: 171 GNPGQANYSAAKAGVIGLTKTVAK----ELASRGITVNAVAPGFIATDMTS 217
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 95 GWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
G P A Y +K GV LT+ K EL +++ +NA+ PG++AT+M+ +
Sbjct: 147 GNPGQANYVAAKAGVIGLTKTSAK----ELASRNITVNAIAPGFIATDMTDVL 195
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140
AY SK V ++++ DC L + D +N VHPGY+ T
Sbjct: 153 GAYNASKGAVRIMSK--SAALDCALKDYDVRVNTVHPGYIKT 192
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140
AY SK V ++++ DC L + D +N VHPGY+ T
Sbjct: 153 GAYNASKGAVRIMSK--SAALDCALKDYDVRVNTVHPGYIKT 192
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 83 ITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+T E RA VA Y V+K G+ +LTR ++ + G Q NA+ PGY+ T+M
Sbjct: 163 LTSELARATVAP------YTVAKGGIKMLTRAMAAEW-AQYGIQ---ANAIGPGYMLTDM 212
Query: 143 SSFMGNVNIFD 153
+ + + FD
Sbjct: 213 NQALIDNPEFD 223
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA +K GV +TR + E+G++ +N V PG++ T+M+
Sbjct: 177 YAAAKAGVAGMTRALAR----EIGSRGITVNCVAPGFIDTDMT 215
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140
SAYA +K G+ +LT K E G + N + PGY+AT
Sbjct: 181 SAYAAAKGGLKMLT----KNIASEYGEANIQCNGIGPGYIAT 218
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA +K G+ TR + E+G++ +NAV PG++ T+M+
Sbjct: 176 YAAAKAGLEGFTRALAR----EVGSRAITVNAVAPGFIDTDMT 214
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
S+Y SK V+ LTR E + +NA+ PGYVAT M+
Sbjct: 157 SSYMASKGAVHQLTR----ALAAEWAGRGVRVNALAPGYVATEMT 197
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
YA +K GV T + K EL +D +NAV PG AT++
Sbjct: 175 YAAAKAGVEAXTHVLSK----ELRGRDITVNAVAPGPTATDL 212
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
Y SK V L R F ELG +N+VHPG V T M S
Sbjct: 174 YTASKHAVTGLAR----AFAAELGKHSIRVNSVHPGPVNTPMGS 213
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147
S+Y SK GV L+++ ELG +N+VHPG T M++ G
Sbjct: 149 SSYGASKWGVRGLSKLAA----VELGTDRIRVNSVHPGMTYTPMTAETG 193
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147
S+Y SK GV L+++ ELG +N+VHPG T M++ G
Sbjct: 149 SSYGASKWGVRGLSKLAA----VELGTDRIRVNSVHPGMTYTPMTAETG 193
>pdb|2B8N|A Chain A, Crystal Structure Of Glycerate Kinase (ec 2.7.1.31)
(tm1585) From Thermotoga Maritima At 2.70 A Resolution
pdb|2B8N|B Chain B, Crystal Structure Of Glycerate Kinase (ec 2.7.1.31)
(tm1585) From Thermotoga Maritima At 2.70 A Resolution
Length = 429
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 34 LLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVA 93
LL+ A + +++ HLSQ+ +R+ V L+D++ + +D+ P
Sbjct: 160 LLKSGASIEEINTVRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGP----- 214
Query: 94 KGWPDSA 100
WPDS+
Sbjct: 215 -AWPDSS 220
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
S Y+ SK V+ RI+ K DC G++ +NAV PG T+M
Sbjct: 165 SLYSGSKGAVDSFVRIFSK--DC--GDKKITVNAVAPGGTVTDM 204
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140
Y ++K+G+N LT ++ ELG ++ INA+ PG + T
Sbjct: 158 YGLAKVGINGLT----QQLSRELGGRNIRINAIAPGPIDT 193
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA SK GV LT+ + ELG N+V PG++AT M+
Sbjct: 165 YAASKAGVIGLTQTAAR----ELGRHGIRCNSVLPGFIATPMT 203
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
SAYA SK GV LT+ K E G +N + PG+ T M+
Sbjct: 170 SAYAASKGGVASLTKALAK----EWGRYGIRVNVIAPGWYRTKMT 210
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
YA SK G+ R + ELG+++ N V PG+V T+M+ +
Sbjct: 159 YAASKAGLVGFARSLAR----ELGSRNITFNVVAPGFVDTDMTKVL 200
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 34/145 (23%)
Query: 26 RTC---------VFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76
RTC + ++ R+ V L ++AG L EL L D V E LT +
Sbjct: 80 RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV-ETNLTGV 138
Query: 77 ------------MYE-----FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119
M E ++I + V P Y+ SK GV T K
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP---YSASKHGVVGFT----KAL 191
Query: 120 DCELGNQDKVINAVHPGYVATNMSS 144
EL +NAV PG+V T M++
Sbjct: 192 GLELARTGITVNAVCPGFVETPMAA 216
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 34/145 (23%)
Query: 26 RTC---------VFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76
RTC + ++ R+ V L ++AG L EL L D V E LT +
Sbjct: 76 RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV-ETNLTGV 134
Query: 77 ------------MYE-----FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119
M E ++I + V P Y+ SK GV T K
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP---YSASKHGVVGFT----KAL 187
Query: 120 DCELGNQDKVINAVHPGYVATNMSS 144
EL +NAV PG+V T M++
Sbjct: 188 GLELARTGITVNAVCPGFVETPMAA 212
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
S ++ SK V+ RI+ K DC G++ +NAV PG T+M
Sbjct: 165 SLFSGSKGAVDSFVRIFSK--DC--GDKKITVNAVAPGGTVTDM 204
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 93 AKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
A G P A Y +K GV LT+ + EL ++ +NAV PG++ ++M+ +
Sbjct: 151 AVGNPGQANYVATKAGVIGLTKSAAR----ELASRGITVNAVAPGFIVSDMTDAL 201
>pdb|2R9Q|A Chain A, Crystal Structure Of 2'-Deoxycytidine 5'-Triphosphate
Deaminase From Agrobacterium Tumefaciens
pdb|2R9Q|B Chain B, Crystal Structure Of 2'-Deoxycytidine 5'-Triphosphate
Deaminase From Agrobacterium Tumefaciens
pdb|2R9Q|C Chain C, Crystal Structure Of 2'-Deoxycytidine 5'-Triphosphate
Deaminase From Agrobacterium Tumefaciens
pdb|2R9Q|D Chain D, Crystal Structure Of 2'-Deoxycytidine 5'-Triphosphate
Deaminase From Agrobacterium Tumefaciens
Length = 370
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 28 CVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70
CV++ PL+ A ++S+SA S L++ R+M D E
Sbjct: 90 CVYIVPLMESLALPADMSASANPKSSTGRLDIFTRVMTDNAQE 132
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 95 GWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
G P A Y SK G+ TR K++ + +NAV PG++ T M+
Sbjct: 145 GNPGQANYVASKAGLIGFTRAVAKEY----AQRGITVNAVAPGFIETEMT 190
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
Y+ SK GV T+ K EL +++ +NA+ PG+++++M+
Sbjct: 193 YSSSKAGVIGFTKSLAK----ELASRNITVNAIAPGFISSDMT 231
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 100 AYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
Y +K V LT K ELG +N++HPG V T M+ ++
Sbjct: 152 GYTATKFAVRGLT----KSTALELGPSGIRVNSIHPGLVKTPMTDWV 194
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
Y+ +K G+ T+ K EL ++ ++NAV PG++ T+M++ +
Sbjct: 157 YSTTKAGLIGFTKSLAK----ELAPRNVLVNAVAPGFIETDMTAVL 198
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 94 KGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNVNIF 152
K +P + Y +K GV L R F ELG +N+VHP +V T M G +F
Sbjct: 170 KAYPHTGHYVAAKHGVVGLMR----AFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMF 225
>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose
Reductase
pdb|2PK3|B Chain B, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose
Reductase
Length = 321
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPG 136
M + +E P + + P S Y VSK V +L R Y K + ++ + N + PG
Sbjct: 132 MILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDI-IHTRTFNHIGPG 186
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA SK GV + R + EL + N V PGY+ T+M+
Sbjct: 153 YAASKAGVIGMARSIAR----ELSKANVTANVVAPGYIDTDMT 191
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA SK GV + R + EL + N V PGY+ T+M+
Sbjct: 153 YAASKAGVIGMARSIAR----ELSKANVTANVVAPGYIDTDMT 191
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA SK GV + R + EL + N V PGY+ T+M+
Sbjct: 173 YAASKAGVIGMARSIAR----ELSKANVTANVVAPGYIDTDMT 211
>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose
4,6- Dehydratase) From Streptomyces Venezuelae With Nad
And Dau Bound
Length = 337
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 97 PDSAYAVSKIGVNLLTRIYQKKFDCEL 123
P+S YA SK G +L+ R Y + + ++
Sbjct: 147 PNSPYAASKAGSDLVARAYHRTYGLDV 173
>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase)
From Streptomyces Venezuelae With Nad And Tyd Bound
Length = 337
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 97 PDSAYAVSKIGVNLLTRIYQKKFDCEL 123
P+S YA SK G +L+ R Y + + ++
Sbjct: 147 PNSPYAASKAGSDLVARAYHRTYGLDV 173
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
Y+ SK GV T K EL +NAV PG+V T M++
Sbjct: 177 YSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
Y+ SK GV T K EL +NAV PG+V T M++
Sbjct: 177 YSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
Y+ SK GV T K EL +NAV PG+V T M++
Sbjct: 177 YSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 216
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 12 QAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLS 52
Q EKT N L T P + + H +V ++S+AGH+S
Sbjct: 131 QIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 173
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
Y+ SK GV T K EL +NAV PG+V T M++
Sbjct: 173 YSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 212
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+G+P SAY+ +K V LT+ + EL + +NA PG V T M
Sbjct: 146 QGFPILSAYSTTKFAVRGLTQAAAQ----ELAPKGHTVNAYAPGIVGTGM 191
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
YA +K G++ T K E + +N V PGY+AT M
Sbjct: 175 YASAKAGIHGFT----KTLALETAKRGITVNTVSPGYLATAM 212
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
Y+ SK GV T K EL +NAV PG+V T M++
Sbjct: 157 YSASKHGVVGFT----KALGLELARTGITVNAVCPGFVETPMAA 196
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 100 AYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141
+Y +K GV LT++ ++ + N +NA+ PGY+ TN
Sbjct: 151 SYTAAKHGVAGLTKLLANEWAAKGIN----VNAIAPGYIETN 188
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
Y SK GV T K EL +NAV PGYV T M+
Sbjct: 175 YTASKHGVVGFT----KSVGFELAKTGITVNAVCPGYVETPMA 213
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 56 NLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIY 115
NL L+ + + L+ E ++I+ H +P Y+++K ++ TR
Sbjct: 119 NLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP--YYSIAKAAIDQYTR-- 174
Query: 116 QKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147
+L +N++ PG VAT S MG
Sbjct: 175 --NTAIDLIQHGIRVNSISPGLVATGFGSAMG 204
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA +K GV T K E+ ++ +N V PG++ T+M+
Sbjct: 158 YAAAKAGVIGFT----KSMAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA +K GV T K E+ ++ +N V PG++ T+M+
Sbjct: 158 YAAAKAGVIGFT----KSMAREVASRGVTVNTVAPGFIETDMT 196
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
YA +K GV T K E+ ++ +N V PG++ T+M+
Sbjct: 158 YAAAKAGVIGFT----KSMAREVASRGVTVNTVAPGFIETDMT 196
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140
S Y+ SK +N +T K CE + +N+V PG + T
Sbjct: 169 SLYSASKGAINQMT----KSLACEWAKDNIRVNSVAPGVILT 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,913,716
Number of Sequences: 62578
Number of extensions: 130301
Number of successful extensions: 325
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 305
Number of HSP's gapped (non-prelim): 56
length of query: 153
length of database: 14,973,337
effective HSP length: 90
effective length of query: 63
effective length of database: 9,341,317
effective search space: 588502971
effective search space used: 588502971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)