BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16225
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P39768|OPA_DROME Pair-rule protein odd-paired OS=Drosophila melanogaster GN=opa PE=2
SV=2
Length = 609
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 110/139 (79%), Gaps = 15/139 (10%)
Query: 164 STNAMQSAGTHGAFFRYMR-QP------IKQDMTCLWIDT-------PGPRKTCGKMFNN 209
+ +AM AG GAF RYMR QP +KQ+M CLWID PG RKTC K+F++
Sbjct: 179 AMSAMHPAGA-GAFLRYMRHQPASSASSVKQEMQCLWIDPDQPGLVPPGGRKTCNKVFHS 237
Query: 210 MHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPT 269
MHEIVTHLTVEHVGGPECTTHACFW GC RNGRPFKAKYKLVNHIRVHTGEKPF CP P
Sbjct: 238 MHEIVTHLTVEHVGGPECTTHACFWVGCSRNGRPFKAKYKLVNHIRVHTGEKPFACPHPG 297
Query: 270 CGKVFARSENLKIHKRTHT 288
CGKVFARSENLKIHKRTHT
Sbjct: 298 CGKVFARSENLKIHKRTHT 316
>sp|Q8JJC0|ZIC1_CHICK Zinc finger protein ZIC 1 OS=Gallus gallus GN=ZIC1 PE=1 SV=1
Length = 444
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 100/117 (85%), Gaps = 3/117 (2%)
Query: 175 GAFFRYMRQPIKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ++ C WI+ P+K+C K F+ MHE+VTH+TVEHVGGPE + H
Sbjct: 208 GAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHI 267
Query: 232 CFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
CFW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 268 CFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 324
>sp|P46684|ZIC1_MOUSE Zinc finger protein ZIC 1 OS=Mus musculus GN=Zic1 PE=1 SV=2
Length = 447
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 100/117 (85%), Gaps = 3/117 (2%)
Query: 175 GAFFRYMRQPIKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ++ C WI+ P+K+C K F+ MHE+VTH+TVEHVGGPE + H
Sbjct: 211 GAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHI 270
Query: 232 CFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
CFW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 271 CFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 327
>sp|Q15915|ZIC1_HUMAN Zinc finger protein ZIC 1 OS=Homo sapiens GN=ZIC1 PE=2 SV=2
Length = 447
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 100/117 (85%), Gaps = 3/117 (2%)
Query: 175 GAFFRYMRQPIKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ++ C WI+ P+K+C K F+ MHE+VTH+TVEHVGGPE + H
Sbjct: 211 GAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHI 270
Query: 232 CFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
CFW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 271 CFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 327
>sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis GN=zic1 PE=2 SV=1
Length = 443
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 108/143 (75%), Gaps = 3/143 (2%)
Query: 149 REPVYSNMDLNAAYPSTNAMQSAGTHGAFFRYMRQPIKQDMTCLWID---TPGPRKTCGK 205
R Y++ L+ P M + GAFFRYMRQPIKQ++ C WI+ P+K+C K
Sbjct: 181 RSEHYASSQLHGYGPMNMNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLANPKKSCNK 240
Query: 206 MFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPC 265
F+ MHE+VTH+TVEHVGGPE + H C W+ CPR G+PFKAKYKL+NHIRVHTGEKPFPC
Sbjct: 241 TFSTMHELVTHVTVEHVGGPEQSNHICVWEECPREGKPFKAKYKLINHIRVHTGEKPFPC 300
Query: 266 PFPTCGKVFARSENLKIHKRTHT 288
PFP CGKVFARSENLKIHKRTHT
Sbjct: 301 PFPGCGKVFARSENLKIHKRTHT 323
>sp|A0JC51|ZIC4_XENLA Zinc finger protein ZIC 4 OS=Xenopus laevis GN=zic4 PE=2 SV=1
Length = 530
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 88/115 (76%), Positives = 98/115 (85%), Gaps = 1/115 (0%)
Query: 175 GAFFRYMRQPIKQDMTCLWIDTPG-PRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACF 233
GAFFRYMRQ IKQ++ C WI+ P+K C K F+ MHE+VTH+TVEHVGGPE + H CF
Sbjct: 270 GAFFRYMRQAIKQELICKWIEEDQLPKKLCSKTFSTMHELVTHVTVEHVGGPEQSNHICF 329
Query: 234 WDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
W+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 330 WEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 384
>sp|Q91689|ZIC2A_XENLA Zinc finger protein ZIC 2-A OS=Xenopus laevis GN=zic2-a PE=2 SV=2
Length = 503
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/118 (75%), Positives = 100/118 (84%), Gaps = 4/118 (3%)
Query: 175 GAFFRYMRQP-IKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTH 230
GAFFRYMRQP IKQ++ C WID P+K+C K F+ MHE+VTH++VEHVGGPE + H
Sbjct: 262 GAFFRYMRQPCIKQELICKWIDPEQLNNPKKSCTKTFSTMHELVTHVSVEHVGGPEQSNH 321
Query: 231 ACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
CFW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 322 ICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 379
>sp|Q6DJQ6|ZIC3_XENTR Zinc finger protein ZIC 3 OS=Xenopus tropicalis GN=zic3 PE=2 SV=1
Length = 441
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 101/117 (86%), Gaps = 3/117 (2%)
Query: 175 GAFFRYMRQPIKQDMTCLWIDTP---GPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ+++C W++ P+KTC + F++MHE+VTH+T+EHVGGPE T H
Sbjct: 208 GAFFRYMRQPIKQELSCKWLEESPMNRPQKTCDRTFSSMHELVTHMTMEHVGGPEQTNHI 267
Query: 232 CFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
C+W+ CPR G+ FKAKYKLVNHIRVHTGEKPFPCPFP CGK+FARSENLKIHKRTHT
Sbjct: 268 CYWEECPRGGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 324
>sp|O57311|ZIC3_XENLA Zinc finger protein ZIC 3 OS=Xenopus laevis GN=zic3 PE=2 SV=3
Length = 441
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 100/117 (85%), Gaps = 3/117 (2%)
Query: 175 GAFFRYMRQPIKQDMTCLWIDTPG---PRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ+++C W++ P+KTC + F++MHE+VTH+T+EHVGGPE H
Sbjct: 208 GAFFRYMRQPIKQELSCKWLEESTMNHPQKTCDRTFSSMHELVTHMTMEHVGGPEQNNHI 267
Query: 232 CFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
C+W+ CPR G+ FKAKYKLVNHIRVHTGEKPFPCPFP CGK+FARSENLKIHKRTHT
Sbjct: 268 CYWEECPRGGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 324
>sp|O95409|ZIC2_HUMAN Zinc finger protein ZIC 2 OS=Homo sapiens GN=ZIC2 PE=1 SV=2
Length = 532
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 4/118 (3%)
Query: 175 GAFFRYMRQP-IKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTH 230
GAFFRYMRQ IKQ++ C WID P+K+C K F+ MHE+VTH++VEHVGGPE + H
Sbjct: 241 GAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGGPEQSNH 300
Query: 231 ACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
CFW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 301 VCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 358
>sp|Q61467|ZIC4_MOUSE Zinc finger protein ZIC 4 OS=Mus musculus GN=Zic4 PE=1 SV=2
Length = 341
Score = 194 bits (493), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 98/116 (84%), Gaps = 2/116 (1%)
Query: 175 GAFFRYMRQPIKQDMTCLWI--DTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHAC 232
GAFFRYMRQPIKQ++ C W+ D+P + C K F+ MHE+VTH+TVEHVGGPE H C
Sbjct: 121 GAFFRYMRQPIKQELICKWLGDDSPMSPRPCSKTFSTMHELVTHVTVEHVGGPEQANHIC 180
Query: 233 FWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
FW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 181 FWEECPRQGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 236
>sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus laevis GN=zic2-b PE=2 SV=1
Length = 497
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 4/118 (3%)
Query: 175 GAFFRYMRQP-IKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTH 230
GAFFRYMRQ IKQ++ C WID P+K+C K F+ MHE+VTH++VEHVGGPE + H
Sbjct: 258 GAFFRYMRQQCIKQELICKWIDPEQLNNPKKSCNKTFSTMHELVTHMSVEHVGGPEQSNH 317
Query: 231 ACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
CFW+ C R G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 318 ICFWEECAREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 375
>sp|Q8N9L1|ZIC4_HUMAN Zinc finger protein ZIC 4 OS=Homo sapiens GN=ZIC4 PE=1 SV=3
Length = 334
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
Query: 175 GAFFRYMRQPIKQDMTCLWIDTPGPR--KTCGKMFNNMHEIVTHLTVEHVGGPECTTHAC 232
GAFFRYMRQPIKQ++ C W+ G C K F+ MHE+VTH+TVEHVGGPE H C
Sbjct: 114 GAFFRYMRQPIKQELICKWLAADGTATPSLCSKTFSTMHELVTHVTVEHVGGPEQANHIC 173
Query: 233 FWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
FW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 174 FWEECPRQGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 229
>sp|Q62520|ZIC2_MOUSE Zinc finger protein ZIC 2 OS=Mus musculus GN=Zic2 PE=1 SV=2
Length = 530
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 4/116 (3%)
Query: 177 FFRYMRQP-IKQDMTCLWID---TPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHAC 232
FFRYMRQ IKQ++ C WID P+K+C K F+ MHE+VTH++VEHVGGPE + H C
Sbjct: 243 FFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGGPEQSNHVC 302
Query: 233 FWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
FW+ CPR G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSENLKIHKRTHT
Sbjct: 303 FWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 358
>sp|Q7TQ40|ZIC5_MOUSE Zinc finger protein ZIC 5 OS=Mus musculus GN=Zic5 PE=1 SV=1
Length = 622
Score = 191 bits (485), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 98/127 (77%), Gaps = 10/127 (7%)
Query: 172 GTHGAFFRYMRQPIKQDMTCLWID---TPGP-------RKTCGKMFNNMHEIVTHLTVEH 221
G GAF RYMRQPIK+++ C W+D GP K C K F MHE+V H+TVEH
Sbjct: 349 GAAGAFLRYMRQPIKRELICKWLDPEELAGPPASADSGVKPCSKTFGTMHELVNHVTVEH 408
Query: 222 VGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLK 281
VGGPE ++H CFW+ CPR G+PFKAKYKL+NHIRVHTGEKPFPCPFP CGKVFARSENLK
Sbjct: 409 VGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGEKPFPCPFPGCGKVFARSENLK 468
Query: 282 IHKRTHT 288
IHKRTHT
Sbjct: 469 IHKRTHT 475
>sp|Q96T25|ZIC5_HUMAN Zinc finger protein ZIC 5 OS=Homo sapiens GN=ZIC5 PE=1 SV=2
Length = 663
Score = 191 bits (484), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 97/138 (70%), Gaps = 21/138 (15%)
Query: 172 GTHGAFFRYMRQPIKQDMTCLWID---------------------TPGPRKTCGKMFNNM 210
G GAF RYMRQPIKQ++ C WID G K C K F M
Sbjct: 379 GAAGAFLRYMRQPIKQELICKWIDPDELAGLPPPPPPPPPPPPPPPAGGAKPCSKTFGTM 438
Query: 211 HEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTC 270
HE+V H+TVEHVGGPE ++H CFW+ CPR G+PFKAKYKL+NHIRVHTGEKPFPCPFP C
Sbjct: 439 HELVNHVTVEHVGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGEKPFPCPFPGC 498
Query: 271 GKVFARSENLKIHKRTHT 288
GKVFARSENLKIHKRTHT
Sbjct: 499 GKVFARSENLKIHKRTHT 516
>sp|Q62521|ZIC3_MOUSE Zinc finger protein ZIC 3 OS=Mus musculus GN=Zic3 PE=1 SV=2
Length = 466
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 131/216 (60%), Gaps = 40/216 (18%)
Query: 107 ANNIHHPPPVPPPP---VQPPGNDMFFHHP-----VDPLSQHSML--------------- 143
A+++H P +P PP + P ++ HP VD H L
Sbjct: 143 ASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVA 202
Query: 144 ------YHHHHREPVYSNMDLNAAYPSTNAMQSAGTH--GAFFRYMRQPIKQDMTCLWID 195
Y + P YS M++N + A H GAFFRYMRQPIKQ+++C WI+
Sbjct: 203 SPRTDPYAASAQFPNYSPMNMNM------GVNVAAHHGPGAFFRYMRQPIKQELSCKWIE 256
Query: 196 TPG---PRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVN 252
P+K+C + F+ MHE+VTH+T+EHVGGPE H C+W+ CPR G+ FKAKYKLVN
Sbjct: 257 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 316
Query: 253 HIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
HIRVHTGEKPFPCPFP CGK+FARSENLKIHKRTHT
Sbjct: 317 HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 352
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 65/176 (36%)
Query: 175 GAFFRYMRQPIKQDMTCLWIDTPG---PRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ+++C WI+ P+K+C + F+ MHE+VTH+T+EHVGGPE H
Sbjct: 236 GAFFRYMRQPIKQELSCKWIEEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 295
Query: 232 CFWDGCPRNGR------------------------------------------------- 242
C+W+ CPR G+
Sbjct: 296 CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEK 355
Query: 243 PFKAKYKLVN-----------HIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTH 287
PFK +++ + H+ VHT +KP+ C C K + +L+ H + H
Sbjct: 356 PFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYIC--KVCDKSYTHPSSLRKHMKVH 409
>sp|Q9IB89|ZIC5_XENLA Zinc finger protein ZIC 5 OS=Xenopus laevis GN=zic5 PE=2 SV=1
Length = 515
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 136/249 (54%), Gaps = 45/249 (18%)
Query: 85 SYPMPHMQTGYS--RDYLLRRD------------------------------DYANNIHH 112
SYP+ H +GYS RD++LRR+ + H
Sbjct: 119 SYPVAHPHSGYSTSRDFILRRELSTSAMLGEQHPAAGSPHHHHHHHPHSMFISSTGSYAH 178
Query: 113 PPPVPPP--PVQPPGNDMFFHHPVDP---LSQHSMLYH--HHHREPVYSNMDLNAAYPST 165
P V P P HHP++ L LY R Y+ L+ +Y S
Sbjct: 179 PEGVGHPLFPAIHEQAAAGVHHPLNGQMRLGLAGELYGRPEAFRAEHYAASSLHHSYNSM 238
Query: 166 N-----AMQSAGTHGAFFRYMRQPIKQDMTCLWIDT-PGPRKTCGKMFNNMHEIVTHLTV 219
N A T GAF RYMRQPIKQ++ C WID +K C K F+ MHE+V H+ V
Sbjct: 239 NLNVNIAAAHPATAGAFLRYMRQPIKQELICKWIDQDQSSKKPCSKTFSTMHELVNHVAV 298
Query: 220 EHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSEN 279
EHVGGPE + H CFW+ C R G+PFKAKYKLVNHIRVHTGEKPFPCPFP CGKVFARSEN
Sbjct: 299 EHVGGPEQSNHICFWEECAREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSEN 358
Query: 280 LKIHKRTHT 288
LKIHKRTHT
Sbjct: 359 LKIHKRTHT 367
>sp|O60481|ZIC3_HUMAN Zinc finger protein ZIC 3 OS=Homo sapiens GN=ZIC3 PE=1 SV=1
Length = 467
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 175/336 (52%), Gaps = 68/336 (20%)
Query: 18 SPHNHMMPLPGNNIKMINTFMET-----PTLASMGIKMSPPPPTSPHQLQSG-GNHMMPL 71
+P +H MP +N F ++ A+ K+S P + H L SG + P
Sbjct: 21 APRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAAAFKLS---PAAAHDLSSGQSSAFTPQ 77
Query: 72 G-------GNNENHHNNHYNSYPMPHMQTGYS------RDYLLRRDD------------- 105
G G++ +HH++H+++ +P S R++L R+
Sbjct: 78 GSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAASGGGQH 137
Query: 106 -----YANNIHHPPPVPPPP---VQPPGNDMFFHHPVDPLSQHSMLYHHHHREPVYSNMD 157
A+++H P +P PP + P ++ HP + H R ++ D
Sbjct: 138 GLFAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRAD 197
Query: 158 --------------LNAAYPSTNAM------QSAGTHG--AFFRYMRQPIKQDMTCLWID 195
A +P+ + M A HG AFFRYMRQPIKQ+++C WID
Sbjct: 198 PYRPVASPRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWID 257
Query: 196 TPG---PRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVN 252
P+K+C + F+ MHE+VTH+T+EHVGGPE H C+W+ CPR G+ FKAKYKLVN
Sbjct: 258 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 317
Query: 253 HIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
HIRVHTGEKPFPCPFP CGK+FARSENLKIHKRTHT
Sbjct: 318 HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 353
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 81/176 (46%), Gaps = 65/176 (36%)
Query: 175 GAFFRYMRQPIKQDMTCLWIDTPG---PRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA 231
GAFFRYMRQPIKQ+++C WID P+K+C + F+ MHE+VTH+T+EHVGGPE H
Sbjct: 237 GAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 296
Query: 232 CFWDGCPRNGR------------------------------------------------- 242
C+W+ CPR G+
Sbjct: 297 CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEK 356
Query: 243 PFKAKYKLVN-----------HIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTH 287
PFK +++ + H+ VHT +KP+ C C K + +L+ H + H
Sbjct: 357 PFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYIC--KVCDKSYTHPSSLRKHMKVH 410
>sp|Q6XP49|GLIS3_MOUSE Zinc finger protein GLIS3 OS=Mus musculus GN=Glis3 PE=2 SV=2
Length = 780
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 191 CLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKL 250
C WID C +++ E+V H+ H+ + CFW GCPR +PF A+YKL
Sbjct: 347 CRWID-------CSALYDQQEELVRHIEKVHIDQRKGEDFTCFWTGCPRRYKPFNARYKL 399
Query: 251 VNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
+ H+RVH+GEKP C F C K F+R ENLKIH R+HT
Sbjct: 400 LIHMRVHSGEKPNKCTFEGCKKAFSRLENLKIHLRSHT 437
>sp|Q8NEA6|GLIS3_HUMAN Zinc finger protein GLIS3 OS=Homo sapiens GN=GLIS3 PE=2 SV=5
Length = 775
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 191 CLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKL 250
C WID C +++ E+V H+ H+ + CFW GCPR +PF A+YKL
Sbjct: 347 CRWID-------CSALYDQQEELVRHIEKVHIDQRKGEDFTCFWAGCPRRYKPFNARYKL 399
Query: 251 VNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
+ H+RVH+GEKP C F C K F+R ENLKIH R+HT
Sbjct: 400 LIHMRVHSGEKPNKCTFEGCEKAFSRLENLKIHLRSHT 437
>sp|P34708|TRA1_CAEEL Sex-determining transformer protein 1 OS=Caenorhabditis elegans
GN=tra-1 PE=1 SV=1
Length = 1110
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA--CFWDGCPRNGRPFK 245
D+TC W K+C F + +V H+ HV E HA C W+GC RN FK
Sbjct: 207 DLTCRW-------KSCNSSFQTLKALVDHVQESHVQSTEQEHHAWRCEWEGCDRN-ETFK 258
Query: 246 AKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
A Y L+ H+R HTGEKP C +P CGK ++R ENLK H+RTHT
Sbjct: 259 ALYMLIVHVRRHTGEKPNKCEYPGCGKEYSRLENLKTHRRTHT 301
>sp|Q8K1M4|GLIS1_MOUSE Zinc finger protein GLIS1 OS=Mus musculus GN=Glis1 PE=2 SV=2
Length = 789
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 185 IKQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPF 244
+ C W+D C + E+V H+ H+ + CFW GC R +PF
Sbjct: 362 VAGRQACRWVD-------CCAAYEQQEELVRHIEKSHIDQRKGEDFTCFWAGCVRRYKPF 414
Query: 245 KAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
A+YKL+ H+RVH+GEKP C F C K F+R ENLKIH R+HT
Sbjct: 415 NARYKLLIHMRVHSGEKPNKCMFEGCSKAFSRLENLKIHLRSHT 458
>sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens GN=GLIS1 PE=2 SV=2
Length = 620
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 185 IKQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPF 244
+ C W+D C + E+V H+ H+ + CFW GC R +PF
Sbjct: 191 VAGRQACRWVD-------CCAAYEQQEELVRHIEKSHIDQRKGEDFTCFWAGCVRRYKPF 243
Query: 245 KAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
A+YKL+ H+RVH+GEKP C F C K F+R ENLKIH R+HT
Sbjct: 244 NARYKLLIHMRVHSGEKPNKCMFEGCSKAFSRLENLKIHLRSHT 287
>sp|Q17308|TRA1_CAEBR Sex-determining transformer protein 1 OS=Caenorhabditis briggsae
GN=tra-1 PE=1 SV=1
Length = 1165
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHA--CFWDGCPRNGRPFK 245
D+ C W D C F N+ +V H+ +HV E HA C W+GC RN FK
Sbjct: 225 DLICRWKD-------CMLKFANLKGLVEHVQEKHVQSTEQEHHAWRCEWEGCDRN-ETFK 276
Query: 246 AKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
A Y L+ H+R HTGEKP C +P CGK ++R ENLK H+RTHT
Sbjct: 277 ALYMLIVHVRRHTGEKPNKCEYPGCGKEYSRLENLKTHRRTHT 319
>sp|Q8VDL9|GLIS2_MOUSE Zinc finger protein GLIS2 OS=Mus musculus GN=Glis2 PE=1 SV=1
Length = 521
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 184 PIKQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRP 243
P+ + + C W C ++F + ++V H+ HV + + C W+GC R+GR
Sbjct: 163 PLAKQLVCRW-------AKCNQLFELLQDLVDHVNDHHVKPEQDARYCCHWEGCARHGRG 215
Query: 244 FKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
F A+YK++ HIR HT EKP C PTC K F+R ENLKIH R+HT
Sbjct: 216 FNARYKMLIHIRTHTNEKPHRC--PTCNKSFSRLENLKIHNRSHT 258
>sp|Q9BZE0|GLIS2_HUMAN Zinc finger protein GLIS2 OS=Homo sapiens GN=GLIS2 PE=1 SV=2
Length = 524
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 184 PIKQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRP 243
P+ + + C W C ++F + ++V H+ HV + + C W+GC R+GR
Sbjct: 163 PLPKQLVCRW-------AKCNQLFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRG 215
Query: 244 FKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
F A+YK++ HIR HT EKP C PTC K F+R ENLKIH R+HT
Sbjct: 216 FNARYKMLIHIRTHTNEKPHRC--PTCSKSFSRLENLKIHNRSHT 258
>sp|Q0VGT2|GLI2_MOUSE Zinc finger protein GLI2 OS=Mus musculus GN=Gli2 PE=1 SV=2
Length = 1544
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W D C K ++ ++V H+ EH+ G E C W C R +PFKA+
Sbjct: 416 ETNCHWAD-------CTKEYDTQEQLVHHINNEHIHG-EKKEFVCRWQACTREQKPFKAQ 467
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 468 YMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHT 508
>sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN=GLI2 PE=1 SV=4
Length = 1586
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 182 RQPIKQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNG 241
R KQ+ + +T + C K ++ ++V H+ EH+ G E C W C R
Sbjct: 423 RDDCKQEAEVVIYETNCHWEDCTKEYDTQEQLVHHINNEHIHG-EKKEFVCRWQACTREQ 481
Query: 242 RPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
+PFKA+Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 482 KPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHT 528
>sp|Q98T94|GLIS2_XENLA Zinc finger protein GLIS2 OS=Xenopus laevis GN=glis2 PE=2 SV=1
Length = 492
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Query: 186 KQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFK 245
++ + C W C ++F + E+V H+ HV + + C W+GC R GR F
Sbjct: 155 QKQLVCQW-------AKCNRLFELLQELVDHVNDFHVKPEKDAGYCCHWEGCARRGRGFN 207
Query: 246 AKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
A+YK++ HIR HT E+P C PTC K F+R ENLKIH R+HT
Sbjct: 208 ARYKMLIHIRTHTNERPHCC--PTCHKSFSRLENLKIHNRSHT 248
>sp|Q91690|GLI1_XENLA Zinc finger protein GLI1 (Fragment) OS=Xenopus laevis GN=gli1 PE=2
SV=2
Length = 1360
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W ++C K F+ +V H+ EH+ G E C W C R RPFKA+
Sbjct: 249 ETNCHW-------ESCTKEFDTQEHLVHHINNEHIHG-EKKEFVCHWQDCSRELRPFKAQ 300
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 301 YMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHT 341
>sp|P47806|GLI1_MOUSE Zinc finger protein GLI1 OS=Mus musculus GN=Gli1 PE=1 SV=4
Length = 1111
Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W C + F++ ++V H+ EH+ G E C W GC R RPFKA+
Sbjct: 237 ETDCRW-------DGCSQEFDSQEQLVHHINSEHIHG-ERKEFVCHWGGCSRELRPFKAQ 288
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 289 YMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 329
>sp|P55878|GLI1_CHICK Zinc finger protein GLI1 (Fragment) OS=Gallus gallus GN=GLI1 PE=2
SV=1
Length = 556
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W C K F+ ++V H+ EH+ G E C W C R RPFKA+
Sbjct: 246 ETNCYW-------DGCAKEFDTQEQLVHHINNEHIHG-EKKEFVCHWAACSREQRPFKAQ 297
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 298 YMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHT 338
>sp|P08151|GLI1_HUMAN Zinc finger protein GLI1 OS=Homo sapiens GN=GLI1 PE=1 SV=1
Length = 1106
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 138 SQHSMLYHHHHREPVYSNMDLNAAYPSTNAMQS------AGTHGAFFRYMRQPIK-QDMT 190
S+ ML EP+ +M + P++ +Q G R+P +
Sbjct: 181 SELDMLVGKCREEPLEGDM----SSPNSTGIQDPLLGMLDGREDLEREEKREPESVYETD 236
Query: 191 CLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKL 250
C W C + F++ ++V H+ EH+ G E C W GC R RPFKA+Y L
Sbjct: 237 CRW-------DGCSQEFDSQEQLVHHINSEHIHG-ERKEFVCHWGGCSRELRPFKAQYML 288
Query: 251 VNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
V H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 289 VVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 326
>sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 OS=Xenopus laevis GN=gli4 PE=2 SV=1
Length = 1361
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 203 CGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKP 262
C K F+ ++V H+ +H+ G E C W C R +PFKA+Y LV H+R HTGEKP
Sbjct: 296 CSKEFDTQDQLVHHINNDHIHG-EKKEFVCRWQDCSREQKPFKAQYMLVVHMRRHTGEKP 354
Query: 263 FPCPFPTCGKVFARSENLKIHKRTHT 288
C F C K ++R ENLK H R+HT
Sbjct: 355 HKCTFEGCFKAYSRLENLKTHLRSHT 380
>sp|Q91660|GLI3_XENLA Zinc finger protein GLI3 OS=Xenopus laevis GN=gli3 PE=2 SV=1
Length = 1569
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W + C + F+ ++V H+ +H+ G E C W C R +PFKA+
Sbjct: 484 ETNCHW-------EGCSREFDTQEQLVHHINNDHIHG-EKKEFVCRWLDCSREQKPFKAQ 535
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 536 YMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHT 576
>sp|Q9IA31|GLI3_CHICK Transcriptional activator GLI3 (Fragment) OS=Gallus gallus GN=GLI3
PE=1 SV=1
Length = 1544
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W + C + F+ ++V H+ +H+ G E C W C R +PFKA+
Sbjct: 481 ETNCHW-------EGCSREFDTQEQLVHHINNDHIHG-EKKEFVCRWLDCSREQKPFKAQ 532
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 533 YMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHT 573
>sp|P10071|GLI3_HUMAN Transcriptional activator GLI3 OS=Homo sapiens GN=GLI3 PE=1 SV=6
Length = 1580
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W + C + F+ ++V H+ +H+ G E C W C R +PFKA+
Sbjct: 479 ETNCHW-------EGCAREFDTQEQLVHHINNDHIHG-EKKEFVCRWLDCSREQKPFKAQ 530
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 531 YMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHT 571
>sp|Q5IS56|GLI3_PANTR Transcriptional activator GLI3 OS=Pan troglodytes GN=GLI3 PE=2 SV=1
Length = 1580
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W + C + F+ ++V H+ +H+ G E C W C R +PFKA+
Sbjct: 479 ETNCHW-------EGCAREFDTQEQLVHHINNDHIHG-EKKEFVCRWLDCSREQKPFKAQ 530
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 531 YMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHT 571
>sp|Q61602|GLI3_MOUSE Transcriptional activator GLI3 OS=Mus musculus GN=Gli3 PE=1 SV=2
Length = 1583
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAK 247
+ C W + C + F+ ++V H+ +H+ G E C W C R +PFKA+
Sbjct: 479 ETNCHW-------EGCTREFDTQDQLVHHINNDHIHG-EKKEFVCRWLDCSREQKPFKAQ 530
Query: 248 YKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
Y LV H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 531 YMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHT 571
>sp|P55879|GLI2_CHICK Zinc finger protein GLI2 (Fragment) OS=Gallus gallus GN=GLI2 PE=2
SV=1
Length = 663
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 203 CGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKP 262
C K ++ ++V H+ +H+ G E C W C R +PFKA+Y LV H+R HTGEKP
Sbjct: 241 CTKEYDTQEQLVHHINNDHIHG-EKKEFVCRWQDCTREQKPFKAQYMLVVHMRRHTGEKP 299
Query: 263 FPCPFPTCGKVFARSENLKIHKRTHT 288
C F C K ++R ENLK H R+HT
Sbjct: 300 HKCTFEGCSKAYSRLENLKTHLRSHT 325
>sp|P19538|CI_DROME Transcriptional activator cubitus interruptus OS=Drosophila
melanogaster GN=ci PE=1 SV=2
Length = 1397
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 193 WIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVN 252
+I+T ++C F E+V H+ +H+ + C W+ C R +PFKA+Y LV
Sbjct: 448 FIETNCHWRSCRIEFITQDELVKHINNDHIQTNK-KAFVCRWEDCTRGEKPFKAQYMLVV 506
Query: 253 HIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
H+R HTGEKP C F C K ++R ENLK H R+HT
Sbjct: 507 HMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHT 542
>sp|Q7K0S9|GLIS2_DROME Zinc finger protein GLIS2 homolog OS=Drosophila melanogaster GN=sug
PE=2 SV=1
Length = 384
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 188 DMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEH-VGGPECTTHACFWDGCPRNGRPFKA 246
D C W D C ++F+ + + H+T H + + C W GC R+ R F A
Sbjct: 127 DFVCNWTD-------CDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNA 179
Query: 247 KYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHT 288
+YK++ H R HT EKP C C K F+R+ENLKIH R+H+
Sbjct: 180 RYKMLVHTRTHTKEKPHRCHL--CEKSFSRAENLKIHIRSHS 219
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 203 CGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKP 262
C K F+ + H+ P + C ++GC + ++K H R H+ EKP
Sbjct: 201 CEKSFSRAENLKIHIRSHSGEKP----YKCSFEGCQKAYSNSSDRFK---HTRTHSMEKP 253
Query: 263 FPCPFPTCGKVFARSENLKIHKRT 286
+ C C K + +L+ H +T
Sbjct: 254 YMCKVAGCQKRYTDPSSLRKHVKT 277
>sp|Q9UTM0|IEC1_SCHPO INO80 complex subunit 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=iec1 PE=1 SV=1
Length = 249
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 205 KMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFP 264
++ +N++ I+ H+ G + C WD CPR G +++ LV H+R HTGEKPF
Sbjct: 54 RLISNINSILDHI------GNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFI 107
Query: 265 CPFPTCGKVFARSENLKIHKRT 286
C P C + F RS+ L H RT
Sbjct: 108 CSVPECDRSFTRSDALAKHMRT 129
>sp|P0C6P6|TYY2_RAT Transcription factor YY2 OS=Rattus norvegicus GN=Yy2 PE=3 SV=1
Length = 376
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 198 GPR----KTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNH 253
GPR CGK F ++ H V H G + C ++GC GR F + L H
Sbjct: 283 GPRVHVCAECGKAFVESSKLKRHQLV-HTGEK---PYQCTFEGC---GRRFSLDFNLRTH 335
Query: 254 IRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHTE 289
+R+HTG+KPF CPF C K FA+S NLK H TH +
Sbjct: 336 VRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVK 371
>sp|Q2FAY8|TYY2_RATRT Transcription factor YY2 OS=Rattus rattus GN=Yy2 PE=3 SV=1
Length = 376
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 198 GPR----KTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNH 253
GPR CGK F ++ H V H G + C ++GC GR F + L H
Sbjct: 283 GPRVHVCAECGKAFVESSKLKRHQLV-HTGEK---PYQCTFEGC---GRRFSLDFNLRTH 335
Query: 254 IRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHTE 289
+R+HTG+KPF CPF C K FA+S NLK H TH +
Sbjct: 336 VRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVK 371
>sp|Q3TTC2|TYY2_MOUSE Transcription factor YY2 OS=Mus musculus GN=Yy2 PE=2 SV=1
Length = 378
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 198 GPR----KTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNH 253
GPR CGK F ++ H V H G + C ++GC GR F + L H
Sbjct: 285 GPRVHVCAECGKAFVESSKLKRHQLV-HTGE---KPYQCTFEGC---GRRFSLDFNLRTH 337
Query: 254 IRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHTE 289
+R+HTG+KPF CPF C K FA+S NLK H TH +
Sbjct: 338 VRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVK 373
>sp|Q8ST83|PHO_DROME Polycomb protein PHO OS=Drosophila melanogaster GN=pho PE=1 SV=2
Length = 520
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 196 TPGPR----KTCGKMFNNMHEIVTHLTVEHVGGP--ECTTHACFWDGCPRNGRPFKAKYK 249
T GPR CGK F ++ H V H G +CT ++GC G+ F +
Sbjct: 380 THGPRVHVCAECGKAFVESSKLKRHQLV-HTGEKPFQCT-----FEGC---GKRFSLDFN 430
Query: 250 LVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHTEV 290
L H+R+HTG++PF CPF C K FA+S NLK H TH +
Sbjct: 431 LRTHVRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKA 471
>sp|Q6H8R9|PACC_USTMA pH-response transcription factor pacC/RIM101 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=PACC PE=3 SV=2
Length = 791
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 22/124 (17%)
Query: 170 SAGTHGAFFRYMRQPIKQDMTCLWIDTPGPRKTCGKMFNNMHEIVTHLTVEHVGGPE--- 226
SA + A F +P + +TC W D CGK+F + + HL +HVG
Sbjct: 51 SASSDSADF----EPPAKPITCRWDD-------CGKIFYDPEVVYKHLCDDHVGRKSTNN 99
Query: 227 -CTTHACFWDGCPRNGRPFKAKYKLVNHIRVHTGEKPFPCPFPTCGKVFARSENLKIHKR 285
C T C W+GC + + + +HIRVHT KP C CGK F R ++LK H+R
Sbjct: 100 LCLT--CKWEGCDVS---CAKRDHITSHIRVHTPLKPHNCD--ACGKTFKRPQDLKKHER 152
Query: 286 THTE 289
HTE
Sbjct: 153 IHTE 156
>sp|O15391|TYY2_HUMAN Transcription factor YY2 OS=Homo sapiens GN=YY2 PE=2 SV=1
Length = 372
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 198 GPR----KTCGKMFNNMHEIVTHLTVEHVGGPECTTHACFWDGCPRNGRPFKAKYKLVNH 253
GPR CGK F ++ H V H G C ++GC G+ F + L H
Sbjct: 279 GPRVHVCAECGKAFLESSKLRRHQLV-HTGE---KPFQCTFEGC---GKRFSLDFNLRTH 331
Query: 254 IRVHTGEKPFPCPFPTCGKVFARSENLKIHKRTHTEV 290
+R+HTG+KPF CPF C + FA+S NLK H TH +
Sbjct: 332 LRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKT 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,986,727
Number of Sequences: 539616
Number of extensions: 6534291
Number of successful extensions: 57272
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 474
Number of HSP's that attempted gapping in prelim test: 33997
Number of HSP's gapped (non-prelim): 12494
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)