Query psy1623
Match_columns 522
No_of_seqs 224 out of 412
Neff 5.8
Searched_HMMs 29240
Date Sat Aug 17 00:11:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nk4_A ZONA pellucida 3; ferti 99.6 3.2E-14 1.1E-18 144.2 22.5 221 126-390 4-252 (297)
2 3qw9_A Transforming growth fac 98.5 5.4E-07 1.9E-11 84.9 10.8 95 264-391 25-127 (176)
3 3hms_A Hepatocyte growth facto 97.8 2.4E-05 8.2E-10 67.3 5.2 79 20-108 14-97 (101)
4 3sp8_A Hepatocyte growth facto 95.5 0.014 4.9E-07 58.1 5.6 61 39-108 35-97 (264)
5 2ll3_A Micronemal protein 4; c 94.3 0.032 1.1E-06 46.1 3.8 43 35-84 21-63 (82)
6 4dur_A Plasminogen, serine pro 93.8 0.044 1.5E-06 62.4 5.0 65 33-108 14-78 (791)
7 2qj2_A Hepatocyte growth facto 90.9 0.32 1.1E-05 45.8 6.0 60 20-85 14-78 (184)
8 2yil_A Microneme antigen L2; s 82.9 0.81 2.8E-05 41.1 3.4 39 39-84 24-62 (138)
9 4a5v_A MIC4, micronemal protei 71.1 2.3 7.8E-05 38.9 2.9 41 37-84 24-64 (161)
10 1hky_A MIC-5, etmic5, micronem 67.2 12 0.00042 29.4 5.9 43 35-86 23-65 (86)
11 4a5v_A MIC4, micronemal protei 54.4 6.5 0.00022 35.8 2.7 39 39-84 99-137 (161)
12 2f83_A Coagulation factor XI; 49.1 14 0.00047 40.5 4.7 48 34-83 211-260 (625)
13 2f83_A Coagulation factor XI; 38.1 22 0.00075 38.9 4.1 49 34-84 121-171 (625)
14 2yil_A Microneme antigen L2; s 28.5 26 0.00088 31.2 2.2 34 43-85 101-134 (138)
15 2l34_A TYRO protein tyrosine k 20.7 64 0.0022 21.8 2.4 20 501-520 10-29 (33)
No 1
>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A*
Probab=99.62 E-value=3.2e-14 Score=144.24 Aligned_cols=221 Identities=18% Similarity=0.248 Sum_probs=139.5
Q ss_pred eEEEeCCCcEEEEEeCCCCceE------EEEecCCccCceEeccCCceeEEEEecccCCCCCCceee--Cc--eEEEEEE
Q psy1623 126 VNQVCSEDGMEFTLRTPEGFLG------RIYTYGYYDRCFYRGNGGTANVLRISGAQGYPDCGTQRY--GD--TMTNIVV 195 (522)
Q Consensus 126 v~v~C~~~~m~V~v~t~~pF~G------~IYvkg~~~~C~~~~~~~~~~~l~i~l~~~~~~CG~~~~--~~--~~s~~VV 195 (522)
|+|+|..+.|.|.|...-.-.| .++.++ ..|+....+.....+.|.+ +.+.||++.. ++ .|+|.|+
T Consensus 4 V~V~C~~~~m~V~V~k~~l~~~~~i~~~~L~L~d--~~C~~~~~~~~~~~~~f~~--~l~~CGT~~~~~~~~iiY~N~l~ 79 (297)
T 3nk4_A 4 VAVQCQEAQLVVTVHRDLFGTGRLINAADLTLGP--AACKHSSLNAAHNTVTFAA--GLHECGSVVQVTPDTLIYRTLIN 79 (297)
T ss_dssp EEEEECSSEEEEEEESCCSCSSCCCCGGGEEETT--TTBCCSEEETTTTEEEEEE--ETTCTTCEEEECSSEEEEEEEEE
T ss_pred EEEEeCCCEEEEEEEHHHhCCCCccccceeEECC--CCCCCeeeCCCCcEEEEEe--cCCCCCceeEecCCEEEEEEEEE
Confidence 8999999999999987432222 233331 3899876542222334443 3579999753 33 6899988
Q ss_pred EEecC----eEeeccceEEEEEeeeCCCCCeEEEeeccccCCCCCccee-ecCccCCCCCceEEEEeeCC---C-ceeee
Q psy1623 196 VQFSD----YVQTSRDKRYNLTCLFRGPGEAVVTSSYMTANSGSPIPIE-YLPAENSLSSRVRLQILFQG---R-PTNTI 266 (522)
Q Consensus 196 VQ~hp----~~vT~~Dr~y~V~C~y~~~~e~~vt~~~~~~~~g~p~pi~-~l~~e~~~~~~v~m~I~~~G---~-~v~~a 266 (522)
....| .|.....-.+.++|.|.... .++..... . ...|.. .+..+. .-.+.|++..+. + .-...
T Consensus 80 ~~~~~~~~~~ItR~~~~~l~~~C~Y~~~~--~vs~~~~~-p--~~~~~~~~~~~~g--~~~~~m~l~~d~~~~~~~~~~~ 152 (297)
T 3nk4_A 80 YDPSPASNPVIIRTNPAVIPIECHYPRRE--QVSSNAIR-P--TWSPFNSALSAEE--RLVFSLRLMSDDWSTERPFTGF 152 (297)
T ss_dssp ECCCCCSSTTEESSCCEEEEEEEEEEC-------------C--CBCTTC------C--CCCEEEEEECTTSSSBCCSCCB
T ss_pred EeccCCCCCceEecccEEEEEEEEEcCCC--ccccccCc-C--ccccccccccccc--ceEEEEEeccCCCcccccCCcc
Confidence 76543 36666788899999998632 23322110 0 001111 111111 124677776321 1 11346
Q ss_pred ecCCeEEEEEEEeCCCCceecEEEEEEEEECC---CCCceEEEEcCCCCceecccccCCCCCCCCCCCccccccceeccC
Q psy1623 267 AVGDPLTFKLDSQDGYNYVTDIFATNVIARDP---YSGRSVQLIDRYGYWIIESTFNHLPVNQCSPQRSFSALTVTIFSF 343 (522)
Q Consensus 267 ~VGd~L~l~we~~~~~~~~y~i~V~~C~A~Dg---~~~~~~~LIDe~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~n 343 (522)
.+||+|++++++.......+.++|.+|+|... .+..++.|||.+|
T Consensus 153 ~l~~~lyvev~v~~~~~~~l~l~l~~C~ATps~~~~~~~~y~lI~~~G-------------------------------- 200 (297)
T 3nk4_A 153 QLGDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNG-------------------------------- 200 (297)
T ss_dssp CTTCEEEEEEEECCTTBCCEEEEEEEEEEESSSCTTSSSEEEEEBTTT--------------------------------
T ss_pred cCCCEEEEEEEEecCCCCCEEEEEeeEEEeCCCCccCCceEEEEccCC--------------------------------
Confidence 89999999999876433467899999999964 2346677776677
Q ss_pred CCCCCccccC---Ceee-ccCCCeEEEEEEeEEcCC--CCeEEEEEEEEEccC
Q psy1623 344 RCPVDNFVFP---ALDR-SREGDGLEARFNAFKIPE--SNFLVFEATVRTCRD 390 (522)
Q Consensus 344 gC~~D~~i~~---~l~~-~~~~~~l~a~f~AFKFpd--s~~V~f~C~V~~C~~ 390 (522)
||.|..+.. .+.. ..+...+.-.|+||||++ ...|+|+|.|.+|..
T Consensus 201 -C~~d~~~~~~~s~~~~~~~~~~~~rF~~~~F~F~~~~~~~vylhC~v~vC~~ 252 (297)
T 3nk4_A 201 -CLVDGRVDDTSSAFITPRPREDVLRFRIDVFRFAGDNRNLIYITCHLKVTPA 252 (297)
T ss_dssp -EEGGGGSTTCCCEECSSCSSTTEEEEEEECCEETTCSSCEEEEEEEEEEEET
T ss_pred -CCcCCccccceeEEecCCCCCceEEEEEEeEeccCCCCCeEEEEEEEEEECC
Confidence 999988753 3322 123456777899999999 789999999999974
No 2
>3qw9_A Transforming growth factor beta receptor type 3; cytokine receptor, immunoglobulin domain, ZONA pellucida, TG ligand CO-receptor; HET: NAG BMA FUC MAN; 2.00A {Rattus norvegicus}
Probab=98.49 E-value=5.4e-07 Score=84.89 Aligned_cols=95 Identities=13% Similarity=0.110 Sum_probs=64.6
Q ss_pred eeeecCCeEEEEEEEeCCCCceecEEEEEEEEECCCCCceEEEEcCCCCceecccccCCCCCCCCCCCccccccceeccC
Q psy1623 264 NTIAVGDPLTFKLDSQDGYNYVTDIFATNVIARDPYSGRSVQLIDRYGYWIIESTFNHLPVNQCSPQRSFSALTVTIFSF 343 (522)
Q Consensus 264 ~~a~VGd~L~l~we~~~~~~~~y~i~V~~C~A~Dg~~~~~~~LIDe~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~n 343 (522)
-.+.+||+|++.+++.... ..+.+++.+|+|....+. .+.....||.|
T Consensus 25 ~~v~l~~~lyvev~l~~~d-~~l~l~ld~CwATps~d~-------------------------------~~~~~y~lI~n 72 (176)
T 3qw9_A 25 FSVAENEHVYVEVSVTKAD-QDLGFAIQTCFLSPYSNP-------------------------------DRMSDYTIIEN 72 (176)
T ss_dssp EEECTTCEEEEEEEEEESC-TTEEEEEEEEEEESCSCT-------------------------------TSCCSCEEEET
T ss_pred ceEecCCEEEEEEEeccCC-CceEEEEeeEEeecCCCc-------------------------------cCCccEEEEEC
Confidence 3678999999999987542 457899999999975321 11233456666
Q ss_pred CCCCCccccC-Cee---ec-cCCC--eEEEEEEeEEcC-CCCeEEEEEEEEEccCC
Q psy1623 344 RCPVDNFVFP-ALD---RS-REGD--GLEARFNAFKIP-ESNFLVFEATVRTCRDG 391 (522)
Q Consensus 344 gC~~D~~i~~-~l~---~~-~~~~--~l~a~f~AFKFp-ds~~V~f~C~V~~C~~~ 391 (522)
|||.|..+-- ... .. .++. .+.=.| +|||. +...|+++|.|.+|...
T Consensus 73 GC~~D~t~~~~~~~~v~~~~~ng~s~~~RFsf-~F~Fv~~~~~VYLHC~v~vC~~~ 127 (176)
T 3qw9_A 73 ICPKDDSVKFYSSKRVHFPIPHAEVDKKRFSF-LFKSVFNTSLLFLHCELTLCSRK 127 (176)
T ss_dssp TEECSTTCEEEEEEEEEETTTTEEEEEEEEEE-ECCCCSSCSEEEEEEEEEEEESS
T ss_pred CccCCCCEEEEeccccccccCCCCcceEEEEE-EEEecCCCCeEEEEEeeEEECCC
Confidence 6999986431 111 00 2332 233457 99998 58889999999999864
No 3
>3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A
Probab=97.77 E-value=2.4e-05 Score=67.26 Aligned_cols=79 Identities=16% Similarity=0.366 Sum_probs=60.6
Q ss_pred cccccccccccccccc---ceeeeeeccCHHHHHHHhhcCC--CeEEeeEEeccCCCCCCCCCeEeccCCccccccCCCC
Q psy1623 20 LPISNNIGVRMRMRRQ---FIKKSTTAASLAACERECAESR--DFICRSFNYRAVPYGGQRENCELSDRDARDLDMNNPS 94 (522)
Q Consensus 20 ~~~f~~vg~~~r~~~~---~~~r~~~v~S~~~C~~~C~~e~--~F~CRS~nY~~~~~~~~~~~C~Ls~~d~~sl~~~~p~ 94 (522)
...|.... +.++... ...+...+.|.++|-..|..|+ .|.||||.|+.. ...|.|...++.+- ..
T Consensus 14 L~~y~kTe-g~~L~~~~~~~~~~~~~~~s~eeCA~kC~~~~~~~F~CRAF~y~~k-----~q~C~ll~~ns~s~----~v 83 (101)
T 3hms_A 14 IHEFKKSA-KTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKA-----RKQCLWFPFNSMSS----GV 83 (101)
T ss_dssp GGGEEEEE-EEEEEECCTTCCCEEEECSCHHHHHHHHHHCTTCSSCCCEEEEETT-----TTEEEEESCCTTST----TE
T ss_pred HHHhhhcC-CeEEeccCCCccceeeccCCHHHHHHHHHhccCCCcceeeeEEecC-----CCcEEECCCcCCCc----hh
Confidence 55566655 3333331 4578889999999999999998 899999999853 67999999998763 22
Q ss_pred ceeecCCcceeecc
Q psy1623 95 YFEPTGDFDFYEKS 108 (522)
Q Consensus 95 ~~~~~~~~dYyE~~ 108 (522)
..+.+.++|.||+.
T Consensus 84 ~~~~~~~~dLYEKK 97 (101)
T 3hms_A 84 KKEFGHEFDLYENK 97 (101)
T ss_dssp EEEEEEEEEEEEEG
T ss_pred eeeccCceeeeecc
Confidence 45557889999985
No 4
>3sp8_A Hepatocyte growth factor alpha chain; kringle domain, Met tyrosine kinase, hormone; HET: MES; 1.86A {Homo sapiens} PDB: 3hn4_A*
Probab=95.49 E-value=0.014 Score=58.07 Aligned_cols=61 Identities=21% Similarity=0.492 Sum_probs=49.6
Q ss_pred eeeeccCHHHHHHHhhcCCC--eEEeeEEeccCCCCCCCCCeEeccCCccccccCCCCceeecCCcceeecc
Q psy1623 39 KSTTAASLAACERECAESRD--FICRSFNYRAVPYGGQRENCELSDRDARDLDMNNPSYFEPTGDFDFYEKS 108 (522)
Q Consensus 39 r~~~v~S~~~C~~~C~~e~~--F~CRS~nY~~~~~~~~~~~C~Ls~~d~~sl~~~~p~~~~~~~~~dYyE~~ 108 (522)
+...+.|.++|-..|..++. |.||+|.|+.. ...|.+...++.+- ......+..+|.||+.
T Consensus 35 ~~~~~~~~~~ca~~c~~~~~~~f~craf~~~~~-----~~~c~~~~~~~~s~----~~~~~~~~~~~l~ekk 97 (264)
T 3sp8_A 35 KTKKVNTADQCANRCTRNKGLPFTCKAFVFDKA-----RKQCLWFPFNSMSS----GVKKEFGHEFDLYENK 97 (264)
T ss_dssp EEEECSCHHHHHHHHHSTTCSSSCCCEEEEETT-----TTEEEEESCCTTST----TEEEEECTTEEEEEEH
T ss_pred eeeccCCHHHHHHHHhhccCCCccccceeeecc-----CCeEEEccccCCCC----ceEeecCccEEeeecC
Confidence 78889999999999999998 99999999864 68999999998762 1123334458899985
No 5
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*
Probab=94.31 E-value=0.032 Score=46.05 Aligned_cols=43 Identities=23% Similarity=0.485 Sum_probs=36.6
Q ss_pred cceeeeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCC
Q psy1623 35 QFIKKSTTAASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRD 84 (522)
Q Consensus 35 ~~~~r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d 84 (522)
+-+++.+.+.++++|+++|+.+. .|+.|+|+.. ...|.|-...
T Consensus 21 ~~i~~~~~~~sl~~Cq~aC~a~~--~C~aFTyN~~-----s~~CflKs~~ 63 (82)
T 2ll3_A 21 QTIGEVKRASSLSECRARCQAEK--ECSHYTYNVK-----SGLCYPKRGK 63 (82)
T ss_dssp CBSSSCEECSSHHHHHHHHHHCT--TEEEEEEETT-----TTEEEEEESS
T ss_pred ccccccccCCCHHHHHHHhhccC--CCCeEEeccC-----CCceEcccCC
Confidence 44678899999999999999987 6999999964 7999998543
No 6
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=93.84 E-value=0.044 Score=62.40 Aligned_cols=65 Identities=25% Similarity=0.534 Sum_probs=51.9
Q ss_pred cccceeeeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCCccccccCCCCceeecCCcceeecc
Q psy1623 33 RRQFIKKSTTAASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRDARDLDMNNPSYFEPTGDFDFYEKS 108 (522)
Q Consensus 33 ~~~~~~r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d~~sl~~~~p~~~~~~~~~dYyE~~ 108 (522)
+....++...+.|.++|-..|..++.|.||+|.|+.. ...|.|...++.+- .+....+++-||+.
T Consensus 14 ~~~~~~~~~~~~~~~~ca~~c~~~~~~~cr~f~~~~~-----~~~c~~~~~~~~~~------~~~~~~~~~l~~~~ 78 (791)
T 4dur_A 14 LFSVTKKQLGAGSIEECAAKCEEDEEFTCRAFQYHSK-----EQQCVIMAENRKSS------IIIRMRDVVLFEKK 78 (791)
T ss_dssp ECCSSEEEEECSSHHHHHHHHHHCSSSCCCEEEEETT-----TTEEEEESCCTTTS------CEEEEEEEEEEEEG
T ss_pred EeccChhhcccCCHHHHHHHhhccCCcceeeeeeecc-----CCceEECCCcCCCc------hhhccccccchhcc
Confidence 3355578889999999999999999999999999853 68999998887652 23334568888874
No 7
>2qj2_A Hepatocyte growth factor; HGF/SF, hormone/growth factor; 1.81A {Homo sapiens} SCOP: g.10.1.1 g.14.1.1 PDB: 1nk1_A 3mkp_A* 1gmn_A* 1gmo_A* 1bht_A* 1gp9_A* 2qj4_A
Probab=90.89 E-value=0.32 Score=45.84 Aligned_cols=60 Identities=13% Similarity=0.389 Sum_probs=43.6
Q ss_pred cccccccccccccc---ccceeeeeeccCHHHHHHHhhcCC--CeEEeeEEeccCCCCCCCCCeEeccCCc
Q psy1623 20 LPISNNIGVRMRMR---RQFIKKSTTAASLAACERECAESR--DFICRSFNYRAVPYGGQRENCELSDRDA 85 (522)
Q Consensus 20 ~~~f~~vg~~~r~~---~~~~~r~~~v~S~~~C~~~C~~e~--~F~CRS~nY~~~~~~~~~~~C~Ls~~d~ 85 (522)
+..|.+.. +.+|. +...++...+.+.++|-..|..++ .|.||+|.|+.. ...|.+.....
T Consensus 14 l~~~~~~~-~~~l~~~~~~~~~~~~~~~~~e~Ca~~C~~~~~~~~~C~af~y~~~-----~~~C~~~p~~~ 78 (184)
T 2qj2_A 14 IHEFKKSA-KTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKA-----RKQCLWFPFNS 78 (184)
T ss_dssp GGGEEEET-TEEEEECSTTCCCEEEECSCHHHHHHHHHTTTTCSSCCCEEEEETT-----TTEEEEESSCT
T ss_pred HHHHhhhc-CcEEeccCccccccccccCCHHHHHHHHHhccCCcceeecceEecc-----CCeEEEcCCcC
Confidence 45565555 33333 235667888999999999999997 799999999853 56898854443
No 8
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=82.85 E-value=0.81 Score=41.15 Aligned_cols=39 Identities=26% Similarity=0.561 Sum_probs=33.7
Q ss_pred eeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCC
Q psy1623 39 KSTTAASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRD 84 (522)
Q Consensus 39 r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d 84 (522)
....+.|.++|+++|..+. .|+-|+|+.. ...|+|.+..
T Consensus 24 ~~~~v~Sa~~Cq~~C~~~~--~C~~FTf~~~-----~k~C~LK~~~ 62 (138)
T 2yil_A 24 SVVHVASAQDCMKECQALP--TCSHFTYNKN-----SKKCHLKAGA 62 (138)
T ss_dssp EEEECSSHHHHHHHHHHST--TCCEEEEETT-----TCEEEEECSC
T ss_pred cccCCCCHHHHHHHccCCC--CCCEEEEECC-----CCEEEeccCc
Confidence 3789999999999999987 5999999854 7999999643
No 9
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=71.07 E-value=2.3 Score=38.90 Aligned_cols=41 Identities=22% Similarity=0.542 Sum_probs=34.6
Q ss_pred eeeeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCC
Q psy1623 37 IKKSTTAASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRD 84 (522)
Q Consensus 37 ~~r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d 84 (522)
++....+.+.++|+.+|.... .|+.|+|+.. ...|+|-+..
T Consensus 24 i~~~~~~~s~~~Cq~~C~~~p--~C~~fTf~~~-----~~~C~LK~s~ 64 (161)
T 4a5v_A 24 IGEPVPDVSLEQCAAQCKAVD--GCTHFTYNDD-----SKMCHVKEGK 64 (161)
T ss_dssp CSCCBTTCCHHHHHHHHHHST--TCSEEEEETT-----TCCEEEECSS
T ss_pred eeeeecCCCHHHHHHHCcCCC--CCcEEEEECC-----CCEEEEeCCC
Confidence 345678999999999999987 6999999843 7999999755
No 10
>1hky_A MIC-5, etmic5, microneme protein 5 precursor; adhesin, PAN module; NMR {Eimeria tenella} SCOP: g.10.1.3
Probab=67.21 E-value=12 Score=29.37 Aligned_cols=43 Identities=30% Similarity=0.475 Sum_probs=34.6
Q ss_pred cceeeeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCCcc
Q psy1623 35 QFIKKSTTAASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRDAR 86 (522)
Q Consensus 35 ~~~~r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d~~ 86 (522)
+-......+.|-..|+++|...- -||=|+.- ++.|.|+.+|..
T Consensus 23 gkaiseakaassqacqelcekda--kcrfftla-------sgkcslfaddaa 65 (86)
T 1hky_A 23 GKAISEAKAASSQACQELCEKDA--KCRFFTLA-------SGKCSLFADDAA 65 (86)
T ss_dssp SCCSEEECCSSHHHHHHHHHHCT--TCSBCEEC-------SSCEEEBSSCSS
T ss_pred chhhhhhHHHhHHHHHHHHhccc--ceeEEEee-------cCceeeeccchh
Confidence 33445667899999999998864 69999884 799999998864
No 11
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=54.44 E-value=6.5 Score=35.84 Aligned_cols=39 Identities=23% Similarity=0.635 Sum_probs=32.8
Q ss_pred eeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCC
Q psy1623 39 KSTTAASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRD 84 (522)
Q Consensus 39 r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d 84 (522)
+...+.+.++|+++|.... .|+.|+|+. ....|.|-...
T Consensus 99 ~~~~~~s~~~Cq~~C~~~~--~C~~fTy~~-----~~~~C~LK~~~ 137 (161)
T 4a5v_A 99 TAMVTSQSADCQAACAADP--SCEIFTYNE-----HDQKCTFKGRG 137 (161)
T ss_dssp CCCBCSCHHHHHHHHHHCT--TCCEEEEET-----TTTEEEEECTT
T ss_pred ccccCCCHHHHHHHcccCC--CCCEEEeeC-----CCCeeEeCCCC
Confidence 4578899999999999986 699999984 37999996554
No 12
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=49.06 E-value=14 Score=40.54 Aligned_cols=48 Identities=23% Similarity=0.348 Sum_probs=36.6
Q ss_pred ccceeeeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCC--CCCCCeEeccC
Q psy1623 34 RQFIKKSTTAASLAACERECAESRDFICRSFNYRAVPYG--GQRENCELSDR 83 (522)
Q Consensus 34 ~~~~~r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~--~~~~~C~Ls~~ 83 (522)
.+..-+...+.+.++|+++|..+. .|+.|+|....+. ..+..|.|-+.
T Consensus 211 ~g~d~~~~~~~~~~~C~~~C~~~~--~C~~fT~~~~~~~~~~~~~~C~LK~s 260 (625)
T 2f83_A 211 ADSNIDSVMAPDAFVCGRICTHHP--GCLFFTFFSQEWPKESQRNLCLLKTS 260 (625)
T ss_dssp CSEEEEEEECSSHHHHHHHHHTCS--SCSEEEEECTTCSSGGGTTEEEEEEC
T ss_pred cCcceeeeecCCHHHHHHhccCCC--CCcEEEEecCCccCcccCCeEEeecC
Confidence 345566688999999999999886 5999999754321 23689999874
No 13
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=38.11 E-value=22 Score=38.93 Aligned_cols=49 Identities=22% Similarity=0.499 Sum_probs=36.4
Q ss_pred ccceeeeeeccCHHHHHHHhhcCCCeEEeeEEeccCCCC--CCCCCeEeccCC
Q psy1623 34 RQFIKKSTTAASLAACERECAESRDFICRSFNYRAVPYG--GQRENCELSDRD 84 (522)
Q Consensus 34 ~~~~~r~~~v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~--~~~~~C~Ls~~d 84 (522)
.+.+-+.+.+.+.++|+++|.... .|+.|+|....+. ..+..|.|-+..
T Consensus 121 ~G~d~~~~~~~s~~~C~~~C~~~~--~C~~fTy~~~~~~~~~~~~~C~LK~s~ 171 (625)
T 2f83_A 121 KGINYNSSVAKSAQECQERCTDDV--HCHFFTYATRQFPSLEHRNICLLKHTQ 171 (625)
T ss_dssp ECEEEEEEECSCHHHHHHHHHTSS--SCSEEEEECSSCSCSSSTTEEEEEECS
T ss_pred ecceeeeEeeCCHHHHHHhccCCC--CCcEEEecCCcccCCCCCceeEeccCc
Confidence 455666788999999999998876 6999999643211 135789997644
No 14
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=28.49 E-value=26 Score=31.24 Aligned_cols=34 Identities=18% Similarity=0.481 Sum_probs=29.0
Q ss_pred ccCHHHHHHHhhcCCCeEEeeEEeccCCCCCCCCCeEeccCCc
Q psy1623 43 AASLAACERECAESRDFICRSFNYRAVPYGGQRENCELSDRDA 85 (522)
Q Consensus 43 v~S~~~C~~~C~~e~~F~CRS~nY~~~~~~~~~~~C~Ls~~d~ 85 (522)
+.+..+|+++|..+. .|+-|+|. ...|.|...|.
T Consensus 101 ~~~a~~CQ~~C~~~~--~C~~fTf~-------~~tC~lk~~da 134 (138)
T 2yil_A 101 GQPPALCWAACMGTP--GCDLYTFQ-------GMTCKLYSQTS 134 (138)
T ss_dssp TCCTHHHHHHHHTST--TCCEEECG-------GGEEEEECCCC
T ss_pred cCCHHHHHHHhCCCC--CCcEEEEe-------CCeeEEECCcc
Confidence 367999999999986 59999997 38899988775
No 15
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=20.69 E-value=64 Score=21.83 Aligned_cols=20 Identities=20% Similarity=0.295 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHhhhcee
Q psy1623 501 TTLFILLTFLIVVTAFAGFY 520 (522)
Q Consensus 501 ~~l~i~~~~~~~~~~~~~~~ 520 (522)
.+.++.-++..+.++++++|
T Consensus 10 aGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 10 AGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred EeEeHHHHHHHHHHHHHHhh
Confidence 33333333333344444433
Done!