Query psy16230
Match_columns 292
No_of_seqs 334 out of 2347
Neff 8.2
Searched_HMMs 29240
Date Sat Aug 17 00:12:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16230.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16230hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxe_A Na, K-ATPase alpha subu 100.0 9.7E-33 3.3E-37 285.4 19.2 189 92-292 58-266 (1028)
2 3ixz_A Potassium-transporting 100.0 1.8E-32 6E-37 283.8 18.9 190 91-292 62-271 (1034)
3 3ar4_A Sarcoplasmic/endoplasmi 100.0 1.8E-31 6.1E-36 275.6 17.6 193 91-292 14-227 (995)
4 1mhs_A Proton pump, plasma mem 100.0 1E-31 3.4E-36 273.3 14.4 177 93-292 79-263 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 1.1E-32 3.8E-37 280.0 -9.5 173 90-278 22-206 (885)
6 2hc8_A PACS, cation-transporti 99.9 2E-25 7E-30 172.8 3.9 73 178-252 2-75 (113)
7 2kij_A Copper-transporting ATP 99.9 2.9E-24 9.8E-29 169.1 2.7 75 176-252 6-87 (124)
8 3j08_A COPA, copper-exporting 99.9 1.1E-23 3.8E-28 208.3 4.7 137 139-285 80-221 (645)
9 3rfu_A Copper efflux ATPase; a 99.9 2.2E-23 7.7E-28 208.2 6.5 129 151-288 186-317 (736)
10 3j09_A COPA, copper-exporting 99.9 2.6E-23 9.1E-28 208.0 5.6 124 152-285 173-299 (723)
11 2kij_A Copper-transporting ATP 96.7 0.00079 2.7E-08 52.0 3.1 39 1-59 73-111 (124)
12 3ar4_A Sarcoplasmic/endoplasmi 96.4 0.0014 4.7E-08 67.8 3.3 53 1-60 180-232 (995)
13 2zxe_A Na, K-ATPase alpha subu 96.4 0.0016 5.4E-08 67.5 3.5 50 1-60 222-271 (1028)
14 2hc8_A PACS, cation-transporti 96.3 0.0011 3.6E-08 50.5 1.4 39 1-59 61-99 (113)
15 3ixz_A Potassium-transporting 96.0 0.0037 1.3E-07 64.8 4.1 50 1-60 227-276 (1034)
16 1mhs_A Proton pump, plasma mem 93.5 0.025 8.4E-07 57.8 1.9 40 1-60 229-268 (920)
17 3b8c_A ATPase 2, plasma membra 93.1 0.01 3.5E-07 60.5 -1.7 40 1-60 180-219 (885)
18 3j08_A COPA, copper-exporting 92.2 0.038 1.3E-06 54.3 1.2 39 1-59 182-220 (645)
19 3j09_A COPA, copper-exporting 91.6 0.05 1.7E-06 54.2 1.2 39 1-59 260-298 (723)
20 3rfu_A Copper efflux ATPase; a 90.9 0.092 3.1E-06 52.4 2.3 24 1-38 275-298 (736)
21 2jmz_A Hypothetical protein MJ 77.4 2.3 7.8E-05 34.5 4.2 35 188-224 104-138 (186)
22 3p42_A Predicted protein; beta 67.7 3.7 0.00013 34.8 3.3 31 188-218 167-204 (236)
23 2lcj_A PAB POLC intein; hydrol 64.1 6.7 0.00023 31.7 4.1 32 188-221 94-125 (185)
24 1at0_A 17-hedgehog; developmen 50.5 19 0.00066 27.7 4.5 22 196-218 82-103 (145)
25 3sgi_A DNA ligase; HET: DNA AM 40.5 10 0.00034 36.8 1.6 26 202-227 375-401 (615)
26 4glx_A DNA ligase; inhibitor, 35.3 9 0.00031 36.9 0.4 25 203-227 366-391 (586)
27 2owo_A DNA ligase; protein-DNA 34.9 12 0.0004 36.7 1.2 22 202-223 365-386 (671)
28 1dgs_A DNA ligase; AMP complex 33.5 13 0.00045 36.4 1.2 22 202-223 363-384 (667)
29 2z1c_A Hydrogenase expression/ 28.7 1.1E+02 0.0038 20.7 5.0 30 188-219 16-48 (75)
30 2k1g_A Lipoprotein SPR; soluti 28.5 38 0.0013 25.8 2.9 20 199-219 61-80 (135)
31 4e2u_A PHO RADA intein; HINT-f 27.7 43 0.0015 26.3 3.2 28 188-218 98-125 (168)
32 2jyx_A Lipoprotein SPR; soluti 27.5 28 0.00094 26.5 1.9 20 199-219 61-80 (136)
33 2cw8_A Endonuclease PI-pkoii; 23.2 83 0.0028 29.7 4.8 27 188-215 97-123 (537)
34 3v2d_V 50S ribosomal protein L 20.4 54 0.0018 23.7 2.2 22 206-228 14-39 (101)
No 1
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=9.7e-33 Score=285.42 Aligned_cols=189 Identities=20% Similarity=0.228 Sum_probs=159.7
Q ss_pred hhhhhc--CCCCHHHHHhhhcccccceecCC-CCcHHHHHHHHHhchhHHHHHHHHHHhhhh-------------hHHHH
Q psy16230 92 SQLHQF--NGFTFEEQFMRGIVYGKNEINVP-IQNISSLFVLEALNPFYIFQVFTLCVWFAE-------------AYYYY 155 (292)
Q Consensus 92 ~~~~~~--~GLs~~~~~~r~~~~G~N~i~~~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 155 (292)
..++++ +|||.+|+++|++.||+|+++.+ .+++|.+|++++++||.++++++.++.+.. ++++.
T Consensus 58 ~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~ 137 (1028)
T 2zxe_A 58 NKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYL 137 (1028)
T ss_dssp HHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHH
T ss_pred HHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHH
Confidence 344444 79999999999999999999876 589999999999999988887766554322 35667
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEEEeee-
Q psy16230 156 TGAIICMSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLLQGN- 231 (292)
Q Consensus 156 ~~~i~~~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G~- 231 (292)
+++++++++++.+..+++++ .+.++++....+ .++|+|+ |++++|++++|+|||+|.+ ++||+|||||+|++|+
T Consensus 138 ~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rd-g~~~~I~~~~Lv~GDiV~l-~~Gd~IPaD~~ll~g~~ 215 (1028)
T 2zxe_A 138 GVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRD-GEKSTINAEFVVAGDLVEV-KGGDRIPADLRIISAHG 215 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEET-TEEEEEEGGGCCTTCEEEE-ETTCBCCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEEC-CEEEEEEHHHCCcCCEEEE-CCCCEeeceEEEEeeCc
Confidence 78888889999999999988 666777666555 8999998 9999999999999999999 7999999999999995
Q ss_pred EEeecccccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccEEEEEEeC
Q psy16230 232 CIVNESMLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRT 292 (292)
Q Consensus 232 ~~vdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v~avvi~T 292 (292)
|.||||+|||||.|+.|.+++...++ .+++|++|+||.+.+|++ .++|++|
T Consensus 216 ~~VdeS~LTGES~pv~K~~~~~~~~~----~~~~n~v~~GT~v~~G~~------~~~V~~t 266 (1028)
T 2zxe_A 216 CKVDNSSLTGESEPQTRSPEFSSENP----LETRNIAFFSTNCVEGTA------RGVVVYT 266 (1028)
T ss_dssp EEEECHHHHSCCSCEECCSSCCCSST----TTCSSEECTTCEEEEEEE------EEEEEEC
T ss_pred EEEEcCccCCCCcceecccCCCCCCc----ccccceEEeCceEEcceE------EEEEEEe
Confidence 89999999999999999988764332 357899999999999764 7788776
No 2
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=1.8e-32 Score=283.78 Aligned_cols=190 Identities=19% Similarity=0.218 Sum_probs=158.8
Q ss_pred hhhhhhc--CCCCHHHHHhhhcccccceecCCC-CcHHHHHHHHHhchhHHHHHHHHHHhhhh-------------hHHH
Q psy16230 91 NSQLHQF--NGFTFEEQFMRGIVYGKNEINVPI-QNISSLFVLEALNPFYIFQVFTLCVWFAE-------------AYYY 154 (292)
Q Consensus 91 ~~~~~~~--~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 154 (292)
+..++++ +|||.+|+++|++.||+|+++.++ +++|..|++++++||.++++++.++.++. ++++
T Consensus 62 ~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~ 141 (1034)
T 3ixz_A 62 EQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLY 141 (1034)
T ss_pred HHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchh
Confidence 3445554 799999999999999999998664 78999999999999987777665544321 2466
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEEEeee
Q psy16230 155 YTGAIICMSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLLQGN 231 (292)
Q Consensus 155 ~~~~i~~~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G~ 231 (292)
.+++++++++++.++.++|++ .++++++....+ .++|+|| |++++|++++|||||+|.+ ++||+|||||+|++|.
T Consensus 142 ~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRd-G~~~~I~~~eLv~GDiV~l-~~Gd~VPAD~~ll~~~ 219 (1034)
T 3ixz_A 142 LALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRD-GDKFQINADQLVVGDLVEM-KGGDRVPADIRILQAQ 219 (1034)
T ss_pred hhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC-CEEEEEEHHHCCCCcEEEE-cCCceecCCeEEEEeC
Confidence 678888889999999999998 777888777665 8999998 9999999999999999999 7999999999999996
Q ss_pred -EEeecccccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccEEEEEEeC
Q psy16230 232 -CIVNESMLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRT 292 (292)
Q Consensus 232 -~~vdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v~avvi~T 292 (292)
+.||||+|||||.|+.|.+.+.... ....+|++|+||.+.+|++ .++|++|
T Consensus 220 ~l~VdES~LTGES~pv~K~~~~~~~~----~~~~~n~~f~GT~v~~G~~------~~vVv~t 271 (1034)
T 3ixz_A 220 GRKVDNSSLTGESEPQTRSPECTHES----PLETRNIAFFSTMCLEGTA------QGLVVNT 271 (1034)
T ss_pred CceEEecccCCCCCCeeccCCCcccc----ccccccceecceeEEeecc------eEEEEee
Confidence 6899999999999999998765432 2257899999999998764 5666665
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=99.97 E-value=1.8e-31 Score=275.56 Aligned_cols=193 Identities=22% Similarity=0.282 Sum_probs=156.0
Q ss_pred hhhhhhc--CCCCHHHHHhhhcccccceecCC-CCcHHHHHHHHHhchhHHHHHHHHHHhhhhh----------HHHHHH
Q psy16230 91 NSQLHQF--NGFTFEEQFMRGIVYGKNEINVP-IQNISSLFVLEALNPFYIFQVFTLCVWFAEA----------YYYYTG 157 (292)
Q Consensus 91 ~~~~~~~--~GLs~~~~~~r~~~~G~N~i~~~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 157 (292)
++.++++ +|||.+|+++|++.||+|+++.+ .+++|+++++++.+|+.++++++.++++..+ .|..++
T Consensus 14 ~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~ 93 (995)
T 3ar4_A 14 LAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPF 93 (995)
T ss_dssp HHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHH
T ss_pred HHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhH
Confidence 4455554 79999999999999999999876 4799999999999999877776655443321 345567
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCe--EEEEECCCCCCCcEEEEccCCCEEeccEEEEee--
Q psy16230 158 AIICMSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGL--YEEVPTTHLVPGDIIVIPKHGCTLACDATLLQG-- 230 (292)
Q Consensus 158 ~i~~~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~--~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G-- 230 (292)
+++++++++..+.+++++ .++++++....+ .++|+|+ |+ .++|++++|+|||+|.+ ++||+|||||+|++|
T Consensus 94 ~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~-g~~~~~~I~~~~lv~GDiV~l-~~Gd~IPaD~~ll~~~s 171 (995)
T 3ar4_A 94 VILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRA-DRKSVQRIKARDIVPGDIVEV-AVGDKVPADIRILSIKS 171 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBT-TCSSCEEEEGGGCCTTCEEEE-ETTCBCCSEEEEEEECS
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeC-CCceEEEEEHHHCCCCCEEEE-CCCCcccccEEEEEEee
Confidence 777788888888888887 677777776665 8999998 55 58999999999999999 799999999999764
Q ss_pred -eEEeecccccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccEEEEEEeC
Q psy16230 231 -NCIVNESMLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRT 292 (292)
Q Consensus 231 -~~~vdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v~avvi~T 292 (292)
.|.||||+|||||.|+.|.+++..+ ......++++++|+||.+.+|+ +.++|++|
T Consensus 172 ~~l~VdeS~LTGES~pv~K~~~~~~~-~~~~~~~~~~~v~~GT~v~~G~------~~~~V~~t 227 (995)
T 3ar4_A 172 TTLRVDQSILTGESVSVIKHTEPVPD-PRAVNQDKKNMLFSGTNIAAGK------ALGIVATT 227 (995)
T ss_dssp SCEEEECHHHHCCCSCEEECCSCCCC-TTCCGGGCTTEECTTCEEEECE------EEEEEEEC
T ss_pred ceEEEEcccccCCCcceeccccccCC-cccCcccccceEecCCEEEcce------EEEEEEEc
Confidence 5799999999999999999876432 1123446789999999999865 47788876
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=99.97 E-value=1e-31 Score=273.33 Aligned_cols=177 Identities=23% Similarity=0.303 Sum_probs=146.7
Q ss_pred hhhhc--CCCCHHHHHhhhcccccceecCCCCcHHHHHHHHHhchhHHHHHHH-HHHhhhhhHHHHHHHHHHHHHHHHHH
Q psy16230 93 QLHQF--NGFTFEEQFMRGIVYGKNEINVPIQNISSLFVLEALNPFYIFQVFT-LCVWFAEAYYYYTGAIICMSVFGIVS 169 (292)
Q Consensus 93 ~~~~~--~GLs~~~~~~r~~~~G~N~i~~~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 169 (292)
.++++ +|||.+|+++|++.||+|+++.+++++|..|++++.+|+.++++++ ++.|+..+|++ +++++++++++.++
T Consensus 79 ~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~-~~~i~~vv~i~~~i 157 (920)
T 1mhs_A 79 MLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVD-FGVICGLLLLNAVV 157 (920)
T ss_dssp TTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSH-HHHHHHHHHHHHHH
T ss_pred HhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHH
Confidence 34543 7999999999999999999998888899999999999986555554 44555555544 55667778888899
Q ss_pred HHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEEEeee--EEeecccccCCCc
Q psy16230 170 SVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLLQGN--CIVNESMLTGESV 244 (292)
Q Consensus 170 ~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G~--~~vdeS~LTGES~ 244 (292)
.+++++ .++++++....+ .++|+|+ |++++|++++|+|||+|.+ ++||+|||||+|++|+ +.||||+|||||.
T Consensus 158 ~~~qe~~a~~a~~~L~~l~~~~a~V~Rd-G~~~~I~~~eLv~GDiV~l-~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~ 235 (920)
T 1mhs_A 158 GFVQEFQAGSIVDELKKTLALKAVVLRD-GTLKEIEAPEVVPGDILQV-EEGTIIPADGRIVTDDAFLQVDQSALTGESL 235 (920)
T ss_dssp HHHHHHHHHHHHHTTTTCCCSSCEEECS-SSEEECCTTTSCTTSEEEE-CTTCBCSSEEEEEEESSCCEEBCTTTSSCCC
T ss_pred HHHHHHHHHHHHHHhhccCCCEEEEEEC-CEEEEEEHHHcCCCCEEEe-CCCCccccceEEEecCceeeeeccccCCCCc
Confidence 999988 777888876665 8999998 9999999999999999999 7999999999999997 4999999999999
Q ss_pred ceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccEEEEEEeC
Q psy16230 245 PVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRT 292 (292)
Q Consensus 245 pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v~avvi~T 292 (292)
|+.|.++ +.+|+||.+.+|+ +.++|++|
T Consensus 236 PV~K~~g--------------d~v~sGT~v~~G~------~~~~V~~t 263 (920)
T 1mhs_A 236 AVDKHKG--------------DQVFASSAVKRGE------AFVVITAT 263 (920)
T ss_dssp CEECCSS--------------CEECSCBCCSCCC------EEEEEEEC
T ss_pred ceEecCC--------------CeeecCceEecce------EEEEEEEe
Confidence 9999754 4678888887643 46677665
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=99.96 E-value=1.1e-32 Score=280.01 Aligned_cols=173 Identities=28% Similarity=0.343 Sum_probs=142.6
Q ss_pred Chhhhhhc-CCCCHHHHHhhhcccccceecCCCCcHHHHHHHHHhchhHHHHHHHHHH-hhhh------hHHHHHHHHHH
Q psy16230 90 TNSQLHQF-NGFTFEEQFMRGIVYGKNEINVPIQNISSLFVLEALNPFYIFQVFTLCV-WFAE------AYYYYTGAIIC 161 (292)
Q Consensus 90 ~~~~~~~~-~GLs~~~~~~r~~~~G~N~i~~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~i~~ 161 (292)
.+..++++ +|||.+|+++|++.||+|+++.+++++|..|++++++|+.++++++.++ ++.. ..|..++++++
T Consensus 22 ~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~ 101 (885)
T 3b8c_A 22 VFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIIC 101 (885)
T ss_dssp CTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHH
T ss_pred HHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHH
Confidence 34556655 8999999999999999999998888888889999999996665555544 4433 13444566777
Q ss_pred HHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEEEeeeE-Eeecc
Q psy16230 162 MSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLLQGNC-IVNES 237 (292)
Q Consensus 162 ~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G~~-~vdeS 237 (292)
+++++.++++++++ .++++++....+ +++|+|| |++++|++++|+|||+|.+ ++||+|||||+|++|++ .||||
T Consensus 102 ~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~Rd-G~~~~I~~~~Lv~GDiV~l-~~Gd~IPaDg~ll~g~~l~VdES 179 (885)
T 3b8c_A 102 LLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRD-GKWSEQEAAILVPGDIVSI-KLGDIIPADARLLEGDPLKVDQS 179 (885)
T ss_dssp HTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCS-SCSCCCCTTTTCTTSBCCC-CSSCCCSSCCCCCCSSCBCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC-CEEEEEEHHHCCCCCEEEE-CCCCEEeeceEEEEcCccccccc
Confidence 77888888888888 777888776655 8899998 9999999999999999999 79999999999999975 89999
Q ss_pred cccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEE
Q psy16230 238 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQAR 278 (292)
Q Consensus 238 ~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~ 278 (292)
+|||||.|+.|.+++ ++|+||.+.+|+
T Consensus 180 ~LTGES~Pv~K~~g~--------------~v~~GT~v~~G~ 206 (885)
T 3b8c_A 180 ALTGESLPVTKHPGQ--------------EVFSGSTCKQGE 206 (885)
T ss_dssp STTCCSSCCCBSSCC--------------CCCSCCCCCSCC
T ss_pred ccCCCCcceEecCCC--------------ccccCeEEeeeE
Confidence 999999999998653 568888887654
No 6
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.91 E-value=2e-25 Score=172.80 Aligned_cols=73 Identities=30% Similarity=0.544 Sum_probs=65.6
Q ss_pred HHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEEEeeeEEeecccccCCCcceeeccCC
Q psy16230 178 SLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLLQGNCIVNESMLTGESVPVMKTALP 252 (292)
Q Consensus 178 ~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G~~~vdeS~LTGES~pv~K~~~~ 252 (292)
++++|....+ .++|+|+ |+++++++++|+|||+|.+ ++|++|||||+|++|++.||||+|||||.|+.|.+++
T Consensus 2 al~~L~~l~p~~a~v~r~-g~~~~i~~~~l~~GDiv~v-~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~ 75 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRD-GKEIAVPVEEVAVGDIVIV-RPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGD 75 (113)
T ss_dssp HHHHHHHHSCSEEEEEET-TEEEEEEGGGCCTTCEEEE-CTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTC
T ss_pred HHHHHhcCCCCEEEEEEC-CEEEEEEHHHCCCCCEEEE-CCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCC
Confidence 3455555555 8999997 9999999999999999999 8999999999999999999999999999999998764
No 7
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.89 E-value=2.9e-24 Score=169.11 Aligned_cols=75 Identities=27% Similarity=0.438 Sum_probs=65.1
Q ss_pred HHHHHhhhccCc-eEEEEecCCe------EEEEECCCCCCCcEEEEccCCCEEeccEEEEeeeEEeecccccCCCcceee
Q psy16230 176 QKSLHDTVNTVD-KVTVKRSKGL------YEEVPTTHLVPGDIIVIPKHGCTLACDATLLQGNCIVNESMLTGESVPVMK 248 (292)
Q Consensus 176 ~~~l~~l~~~~~-~v~V~r~~g~------~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll~G~~~vdeS~LTGES~pv~K 248 (292)
.+++++|....+ .++|+|+ |+ +.++++++|+|||+|.+ ++|++|||||+|++|.+.||||+|||||.|+.|
T Consensus 6 ~~~l~~L~~l~p~~a~v~r~-g~~~~~~~~~~v~~~~l~~GDiv~v-~~G~~iPaDg~vi~g~~~vdeS~LTGEs~pv~k 83 (124)
T 2kij_A 6 SEALAKLISLQATEATIVTL-DSDNILLSEEQVDVELVQRGDIIKV-VPGGKFPVDGRVIEGHSMVDESLITGEAMPVAK 83 (124)
T ss_dssp CCHHHHHHHTCCSEEEEEEC-SSSTTCCEEEEEETTTCCTTCEEEC-CTTCBCSSCEEECSCCCEEECTTTTCCSSCEEC
T ss_pred HHHHHHHhccCCCEEEEEEC-CCCCceeEEEEEeHHHCCCCCEEEE-CCCCEEEeeEEEEEccEEEEeccccCCCccEEe
Confidence 345566665555 8999996 32 68899999999999999 899999999999999999999999999999999
Q ss_pred ccCC
Q psy16230 249 TALP 252 (292)
Q Consensus 249 ~~~~ 252 (292)
.+++
T Consensus 84 ~~g~ 87 (124)
T 2kij_A 84 KPGS 87 (124)
T ss_dssp CTTE
T ss_pred CCCC
Confidence 8654
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.88 E-value=1.1e-23 Score=208.26 Aligned_cols=137 Identities=22% Similarity=0.343 Sum_probs=103.7
Q ss_pred HHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEE
Q psy16230 139 FQVFTLCVWFAEA--YYYYTGAIICMSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIV 213 (292)
Q Consensus 139 ~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~ 213 (292)
+.+++++.|...+ ||..+++++++++++.+++.+.++ .+.++++....+ .++|+|+ |+++++++++|+|||+|.
T Consensus 80 ~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~-g~~~~i~~~~l~~GDiv~ 158 (645)
T 3j08_A 80 ASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRD-GKEIAVPVEEVAVGDIVI 158 (645)
T ss_dssp HHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEET-TEEEEEEGGGCCTTCEEE
T ss_pred HHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC-CEEEEEEHHHCCCCCEEE
Confidence 3344444444444 566677777888888888877765 556666666665 8999998 999999999999999999
Q ss_pred EccCCCEEeccEEEEeeeEEeecccccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccE
Q psy16230 214 IPKHGCTLACDATLLQGNCIVNESMLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYL 285 (292)
Q Consensus 214 i~~~G~~iP~D~~ll~G~~~vdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v 285 (292)
+ ++||+|||||+|++|++.||||+|||||.|+.|.+++.. .+++++-.|...+.+...|.++.
T Consensus 159 v-~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v--------~~Gt~~~~g~~~~~v~~~G~~T~ 221 (645)
T 3j08_A 159 V-RPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEV--------FGATINNTGVLKIRATRVGGETL 221 (645)
T ss_dssp E-CTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEE--------CTTCEECSSCEEEEEEECGGGSH
T ss_pred E-CCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEe--------eccEEEecCcEEEEEEEcCCccH
Confidence 9 899999999999999999999999999999999876543 34444444555555555554443
No 9
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.2e-23 Score=208.18 Aligned_cols=129 Identities=22% Similarity=0.355 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEE
Q psy16230 151 AYYYYTGAIICMSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATL 227 (292)
Q Consensus 151 ~~~~~~~~i~~~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~l 227 (292)
.||+.+++++++++++.+++.+.++ .++++++....+ .++++|+||++++|++++|+|||+|.| ++||+|||||+|
T Consensus 186 ~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v-~~Ge~IPaDg~v 264 (736)
T 3rfu_A 186 VYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRV-RPGEKIPVDGEV 264 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECC-CSSEECCSCEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEE-CCCCcccccEEE
Confidence 4777788888999999999988877 778888887776 888888449999999999999999999 899999999999
Q ss_pred EeeeEEeecccccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccEEEE
Q psy16230 228 LQGNCIVNESMLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAV 288 (292)
Q Consensus 228 l~G~~~vdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v~av 288 (292)
++|++.||||+|||||.|+.|.+++.. ..++++..|+..+.++..|.++.++.
T Consensus 265 l~G~~~VDES~LTGES~Pv~K~~gd~v--------~~Gt~~~~G~~~~~v~~~G~~T~l~~ 317 (736)
T 3rfu_A 265 QEGRSFVDESMVTGEPIPVAKEASAKV--------IGATINQTGSFVMKALHVGSDTMLAR 317 (736)
T ss_dssp CSSCEEEECSSSTTCSSCEEECTTCEE--------CTTCEEESCCCCEEECCCSTTSHHHH
T ss_pred EECceEeeecccCCccccEEeccCCcC--------CCceEeccceEEEEEEEechhhHHHH
Confidence 999999999999999999999987654 45666666666677777776665443
No 10
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.87 E-value=2.6e-23 Score=208.03 Aligned_cols=124 Identities=23% Similarity=0.377 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhccCc-eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEeccEEEE
Q psy16230 152 YYYYTGAIICMSVFGIVSSVIQTR--QKSLHDTVNTVD-KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLL 228 (292)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~~~~~~~--~~~l~~l~~~~~-~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D~~ll 228 (292)
||..+++++++++++.+++.+.++ .+.++++....+ .++|+|+ |+++++++++|+|||+|.| ++||+|||||+|+
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~-g~~~~i~~~~l~~GDiv~v-~~Ge~IPaDg~vl 250 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRD-GKEIAVPVEEVAVGDIVIV-RPGEKIPVDGVVV 250 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEET-TEEEEEEGGGCCTTCEEEE-CTTCBCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEC-CEEEEEEHHHCCCCCEEEE-CCCCEEeeEEEEE
Confidence 566677778888888888877765 566777766666 8999998 9999999999999999999 8999999999999
Q ss_pred eeeEEeecccccCCCcceeeccCCCCCCCCCcccCCCcEEecccEEEEEEEcCCccE
Q psy16230 229 QGNCIVNESMLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYL 285 (292)
Q Consensus 229 ~G~~~vdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~~l~~Gt~vi~~~~~~~~~v 285 (292)
+|++.||||+|||||.|+.|.+++.. .+++++-.|...+.+...|.++.
T Consensus 251 ~G~~~VdeS~LTGES~pv~K~~g~~v--------~~Gt~~~~g~~~~~v~~~g~~T~ 299 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLKSKGDEV--------FGATINNTGVLKIRATRVGGETL 299 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEE--------CTTCEECSSCEEEEEEECGGGSH
T ss_pred ECCeEEecccccCCCcceeecCCCee--------ccceEEecCcEEEEEEEecCccH
Confidence 99999999999999999999876543 34444445555555555554443
No 11
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=96.74 E-value=0.00079 Score=52.04 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=29.3
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeeccce
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTE 59 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~ 59 (292)
||||||.||.|.+ .+.+|+||.+.+ ..+...+.++|..+
T Consensus 73 ~LTGEs~pv~k~~--------------g~~v~aGt~~~~------G~~~~~v~~~g~~T 111 (124)
T 2kij_A 73 LITGEAMPVAKKP--------------GSTVIAGSINQN------GSLLICATHVGADT 111 (124)
T ss_dssp TTTCCSSCEECCT--------------TEEECTTCEEES------SCCEEEECSCTTTC
T ss_pred cccCCCccEEeCC--------------CCEEEcCCEEee------eEEEEEEEEecccC
Confidence 7999999999986 268999998864 23455666666544
No 12
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=96.42 E-value=0.0014 Score=67.79 Aligned_cols=53 Identities=32% Similarity=0.407 Sum_probs=38.9
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeecccee
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTEL 60 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~~ 60 (292)
||||||+||.|.+.+..+. .....++++.+|+||.+.+- .+.+.+.++|..+.
T Consensus 180 ~LTGES~pv~K~~~~~~~~-~~~~~~~~~~v~~GT~v~~G------~~~~~V~~tG~~T~ 232 (995)
T 3ar4_A 180 ILTGESVSVIKHTEPVPDP-RAVNQDKKNMLFSGTNIAAG------KALGIVATTGVSTE 232 (995)
T ss_dssp HHHCCCSCEEECCSCCCCT-TCCGGGCTTEECTTCEEEEC------EEEEEEEECGGGSH
T ss_pred cccCCCcceeccccccCCc-ccCcccccceEecCCEEEcc------eEEEEEEEcCcchH
Confidence 6999999999998754321 12234678999999999973 36677888887664
No 13
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=96.38 E-value=0.0016 Score=67.51 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=37.1
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeecccee
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTEL 60 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~~ 60 (292)
||||||+||.|.+-+..+... ..+|++|+||.+.+- .+.+.+..+|..+.
T Consensus 222 ~LTGES~pv~K~~~~~~~~~~----~~~n~v~~GT~v~~G------~~~~~V~~tG~~T~ 271 (1028)
T 2zxe_A 222 SLTGESEPQTRSPEFSSENPL----ETRNIAFFSTNCVEG------TARGVVVYTGDRTV 271 (1028)
T ss_dssp HHHSCCSCEECCSSCCCSSTT----TCSSEECTTCEEEEE------EEEEEEEECGGGSH
T ss_pred ccCCCCcceecccCCCCCCcc----cccceEEeCceEEcc------eEEEEEEEeccccH
Confidence 699999999999865443322 457999999999874 35667777776553
No 14
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=96.33 E-value=0.0011 Score=50.45 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=29.0
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeeccce
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTE 59 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~ 59 (292)
||||||.||.|.+- +.+|+||.+.. ..+...+.++|..+
T Consensus 61 ~LTGEs~pv~k~~g--------------~~v~aGt~~~~------G~~~~~V~~~g~~T 99 (113)
T 2hc8_A 61 MISGEPVPVLKSKG--------------DEVFGATINNT------GVLKIRATRVGGET 99 (113)
T ss_dssp HHHCCSSCEEECTT--------------CEECTTCEECS------SCEEEEEEECGGGS
T ss_pred ccCCCCccEEECCC--------------CEEEeCCEEee------ceEEEEEEEecCcC
Confidence 69999999999872 46999998863 34555666777554
No 15
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=96.05 E-value=0.0037 Score=64.84 Aligned_cols=50 Identities=20% Similarity=0.307 Sum_probs=37.1
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeecccee
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTEL 60 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~~ 60 (292)
||||||+||.|.|-+...... ..++++|+||.+.+-+ +.+.+..||..+.
T Consensus 227 ~LTGES~pv~K~~~~~~~~~~----~~~n~~f~GT~v~~G~------~~~vVv~tG~~T~ 276 (1034)
T 3ixz_A 227 SLTGESEPQTRSPECTHESPL----ETRNIAFFSTMCLEGT------AQGLVVNTGDRTI 276 (1034)
T ss_pred ccCCCCCCeeccCCCcccccc----ccccceecceeEEeec------ceEEEEeehhhhH
Confidence 799999999999865432222 3579999999998644 5567788887664
No 16
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=93.45 E-value=0.025 Score=57.82 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=29.9
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeecccee
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTEL 60 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~~ 60 (292)
||||||+||.|.+ .+.+|+||.+.+ ..+.+.+..+|..+.
T Consensus 229 ~LTGES~PV~K~~--------------gd~v~sGT~v~~------G~~~~~V~~tG~~T~ 268 (920)
T 1mhs_A 229 ALTGESLAVDKHK--------------GDQVFASSAVKR------GEAFVVITATGDNTF 268 (920)
T ss_dssp TTSSCCCCEECCS--------------SCEECSCBCCSC------CCEEEEEEECSTTCS
T ss_pred ccCCCCcceEecC--------------CCeeecCceEec------ceEEEEEEEeCCcCH
Confidence 7999999999986 247999997653 345667777776554
No 17
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=93.07 E-value=0.01 Score=60.46 Aligned_cols=40 Identities=40% Similarity=0.544 Sum_probs=30.1
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeecccee
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTEL 60 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~~ 60 (292)
||||||+||.|.|- +.+|+||.+.+- .+.+.+.++|..+.
T Consensus 180 ~LTGES~Pv~K~~g--------------~~v~~GT~v~~G------~~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 180 ALTGESLPVTKHPG--------------QEVFSGSTCKQG------EIEAVVIATGVHTF 219 (885)
T ss_dssp STTCCSSCCCBSSC--------------CCCCSCCCCCSC------CCCCBCCSCTTTTT
T ss_pred ccCCCCcceEecCC--------------CccccCeEEeee------EEEEEEEEcCcccH
Confidence 79999999999862 369999987653 34556777776654
No 18
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=92.20 E-value=0.038 Score=54.27 Aligned_cols=39 Identities=26% Similarity=0.398 Sum_probs=27.8
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeeccce
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTE 59 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~ 59 (292)
||||||+||.|.| .+.+|.||.+. +..+...+.++|..+
T Consensus 182 ~LTGES~Pv~K~~--------------g~~v~~Gt~~~------~g~~~~~v~~~G~~T 220 (645)
T 3j08_A 182 MISGEPVPVLKSK--------------GDEVFGATINN------TGVLKIRATRVGGET 220 (645)
T ss_dssp HHHCCSSCEEECT--------------TCEECTTCEEC------SSCEEEEEEECGGGS
T ss_pred cccCCCCceecCC--------------CCEeeccEEEe------cCcEEEEEEEcCCcc
Confidence 6999999999975 24688998765 344555666666544
No 19
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=91.56 E-value=0.05 Score=54.19 Aligned_cols=39 Identities=26% Similarity=0.398 Sum_probs=27.8
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEEEeeecCCeeeEEEeeeeccce
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVILQARYHGDEYLHAVVIRTEVTE 59 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~q~~~~g~~~v~a~~~~tg~~~ 59 (292)
||||||+||.|.| .+.+|.||.+. +..+...+.++|..+
T Consensus 260 ~LTGES~pv~K~~--------------g~~v~~Gt~~~------~g~~~~~v~~~g~~T 298 (723)
T 3j09_A 260 MISGEPVPVLKSK--------------GDEVFGATINN------TGVLKIRATRVGGET 298 (723)
T ss_dssp HHHCCSSCEEECT--------------TCEECTTCEEC------SSCEEEEEEECGGGS
T ss_pred cccCCCcceeecC--------------CCeeccceEEe------cCcEEEEEEEecCcc
Confidence 6999999999975 34689999764 344555666666544
No 20
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=90.89 E-value=0.092 Score=52.36 Aligned_cols=24 Identities=38% Similarity=0.544 Sum_probs=19.0
Q ss_pred CCCccccccccccCCCCCCCCCccccceeEEEeceEEE
Q psy16230 1 MLTGESVPVMKTALPSQSDFYNEKEDVNHTLYCGTVIL 38 (292)
Q Consensus 1 mltges~pv~k~~~~~~~~~~~~~~~~~~~l~~gt~i~ 38 (292)
||||||+||.|.+ ...+|.||.+.
T Consensus 275 ~LTGES~Pv~K~~--------------gd~v~~Gt~~~ 298 (736)
T 3rfu_A 275 MVTGEPIPVAKEA--------------SAKVIGATINQ 298 (736)
T ss_dssp SSTTCSSCEEECT--------------TCEECTTCEEE
T ss_pred ccCCccccEEecc--------------CCcCCCceEec
Confidence 8999999999976 12478888664
No 21
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=77.41 E-value=2.3 Score=34.55 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=27.4
Q ss_pred eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEEecc
Q psy16230 188 KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACD 224 (292)
Q Consensus 188 ~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~iP~D 224 (292)
.+.+.++ |+..++.+.+|.|||.|.++ .|..++.|
T Consensus 104 p~~v~~~-g~~~w~~A~eLk~GD~v~~~-~~~~~~~~ 138 (186)
T 2jmz_A 104 PVYISKT-GEVLEINAEMVKVGDYIYIP-KNNTINLD 138 (186)
T ss_dssp EEEEEET-TEEEEEEGGGCCTTSEEEEE-CSSSEEEE
T ss_pred EEEEeCC-CeEEEEEhhcCCCCCEEEec-ccCCccce
Confidence 6777776 88899999999999999994 55444433
No 22
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=67.74 E-value=3.7 Score=34.80 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=25.2
Q ss_pred eEEEEecCCeEEEEEC-------CCCCCCcEEEEccCC
Q psy16230 188 KVTVKRSKGLYEEVPT-------THLVPGDIIVIPKHG 218 (292)
Q Consensus 188 ~v~V~r~~g~~~~i~~-------~~Lv~GDii~i~~~G 218 (292)
.++|++.||.....+. .++.|||.|+|+...
T Consensus 167 ~v~VI~~nG~v~~~~~a~Wn~~~~~l~PG~~I~Vp~~~ 204 (236)
T 3p42_A 167 NVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSA 204 (236)
T ss_dssp EEEEECTTSCEEEEECSSTTCCCEECCTTCEEEECBCT
T ss_pred cEEEEeCCCCEEeccccccccCCCCCCCCCEEEEeCCc
Confidence 8999999899887763 379999999996443
No 23
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=64.14 E-value=6.7 Score=31.65 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=26.4
Q ss_pred eEEEEecCCeEEEEECCCCCCCcEEEEccCCCEE
Q psy16230 188 KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTL 221 (292)
Q Consensus 188 ~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G~~i 221 (292)
.+.+.++ |+..++.+.+|.+||.|.+ ..++..
T Consensus 94 ~~~v~~~-g~~~~~~A~eLk~GD~v~v-~~~~~~ 125 (185)
T 2lcj_A 94 PVLVYEN-GRFIEKRAFEVKEGDKVLV-SELELV 125 (185)
T ss_dssp EEEEEET-TEEEEEEGGGCCTTCEEEE-CCCCCS
T ss_pred EEEEecC-CeEEEEEHHHCCCCCEEEE-cccccc
Confidence 6677776 8889999999999999999 466543
No 24
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=50.46 E-value=19 Score=27.71 Aligned_cols=22 Identities=5% Similarity=0.019 Sum_probs=18.5
Q ss_pred CeEEEEECCCCCCCcEEEEccCC
Q psy16230 196 GLYEEVPTTHLVPGDIIVIPKHG 218 (292)
Q Consensus 196 g~~~~i~~~~Lv~GDii~i~~~G 218 (292)
|....+.+.+|++||.|.+ ..|
T Consensus 82 ~~~~~v~A~~l~~GD~v~~-~~~ 103 (145)
T 1at0_A 82 QKLTFVFADRIEEKNQVLV-RDV 103 (145)
T ss_dssp TEEEEEEGGGCCTTCEEEE-ECT
T ss_pred CcEEEEEHHHCcCCCEEEE-ecC
Confidence 4467899999999999999 465
No 25
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=40.46 E-value=10 Score=36.80 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=21.3
Q ss_pred ECCCCCCCcEEEEccCCCEEec-cEEE
Q psy16230 202 PTTHLVPGDIIVIPKHGCTLAC-DATL 227 (292)
Q Consensus 202 ~~~~Lv~GDii~i~~~G~~iP~-D~~l 227 (292)
.-.+|.+||.|.|.++||+||- .+++
T Consensus 375 ~~~di~iGD~V~V~rAGdVIP~V~~vv 401 (615)
T 3sgi_A 375 KRKGVLIGDTVVIRKAGDVIPEVLGPV 401 (615)
T ss_dssp TTTCCCBTCEEEEECCSSSSCCCCEEC
T ss_pred HHcCCCCCCEEEEEEcCCCccceeeec
Confidence 4578999999999889999995 4444
No 26
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=35.26 E-value=9 Score=36.91 Aligned_cols=25 Identities=24% Similarity=0.299 Sum_probs=20.7
Q ss_pred CCCCCCCcEEEEccCCCEEe-ccEEE
Q psy16230 203 TTHLVPGDIIVIPKHGCTLA-CDATL 227 (292)
Q Consensus 203 ~~~Lv~GDii~i~~~G~~iP-~D~~l 227 (292)
..+|.+||.|.|.++||+|| .+.++
T Consensus 366 ~~di~iGD~V~V~rAGdVIP~I~~Vv 391 (586)
T 4glx_A 366 RLGLRIGDKVVIRRAGDVIPQVVNVV 391 (586)
T ss_dssp HHTCEETCEEEEEEETTTEEEEEEEC
T ss_pred hcCCCcCCEEEEEECCCcCccceeee
Confidence 36889999999989999999 44444
No 27
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=34.94 E-value=12 Score=36.70 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=19.1
Q ss_pred ECCCCCCCcEEEEccCCCEEec
Q psy16230 202 PTTHLVPGDIIVIPKHGCTLAC 223 (292)
Q Consensus 202 ~~~~Lv~GDii~i~~~G~~iP~ 223 (292)
...+|.+||.|.|.++||+||-
T Consensus 365 ~~~di~iGD~V~V~rAGdvIP~ 386 (671)
T 2owo_A 365 ERLGLRIGDKVVIRRAGDVIPQ 386 (671)
T ss_dssp HHHTCCBTCEEEEEEETTTEEE
T ss_pred HHcCCCCCCEEEEEECCCcccc
Confidence 3568999999999889999993
No 28
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=33.53 E-value=13 Score=36.37 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=19.2
Q ss_pred ECCCCCCCcEEEEccCCCEEec
Q psy16230 202 PTTHLVPGDIIVIPKHGCTLAC 223 (292)
Q Consensus 202 ~~~~Lv~GDii~i~~~G~~iP~ 223 (292)
...+|.+||.|.|.++||+||-
T Consensus 363 ~~~di~iGD~V~V~rAGdvIP~ 384 (667)
T 1dgs_A 363 EELDIRIGDWVLVHKAGGVIPE 384 (667)
T ss_dssp HHTTCBSSCEEEEEEETTTEEE
T ss_pred HHcCCCCCCEEEEEECCCcchh
Confidence 4578889999999889999993
No 29
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=28.72 E-value=1.1e+02 Score=20.73 Aligned_cols=30 Identities=27% Similarity=0.457 Sum_probs=21.7
Q ss_pred eEEEEecCCeEEEEEC---CCCCCCcEEEEccCCC
Q psy16230 188 KVTVKRSKGLYEEVPT---THLVPGDIIVIPKHGC 219 (292)
Q Consensus 188 ~v~V~r~~g~~~~i~~---~~Lv~GDii~i~~~G~ 219 (292)
.++|-.+ |..++++. .+..|||-|.+ +.|-
T Consensus 16 ~A~vd~~-Gv~r~V~l~Lv~~~~vGD~VLV-H~Gf 48 (75)
T 2z1c_A 16 VAVVDFG-GVKREVRLDLMPDTKPGDWVIV-HTGF 48 (75)
T ss_dssp EEEEEET-TEEEEEECTTSTTCCTTCEEEE-ETTE
T ss_pred EEEEEcC-CEEEEEEEEEeCCCCCCCEEEE-ecch
Confidence 4555454 87788874 46779999999 7874
No 30
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=28.46 E-value=38 Score=25.81 Aligned_cols=20 Identities=25% Similarity=0.640 Sum_probs=15.8
Q ss_pred EEEECCCCCCCcEEEEccCCC
Q psy16230 199 EEVPTTHLVPGDIIVIPKHGC 219 (292)
Q Consensus 199 ~~i~~~~Lv~GDii~i~~~G~ 219 (292)
..|+.+++.|||+|.. ..|.
T Consensus 61 ~~V~~~~l~pGDLvFf-~~~~ 80 (135)
T 2k1g_A 61 KSVSRSNLRTGDLVLF-RAGS 80 (135)
T ss_dssp EEECGGGCCTTEEEEE-EETT
T ss_pred cEecHHHccCCcEEEE-CCCC
Confidence 4577889999999999 4543
No 31
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=27.73 E-value=43 Score=26.31 Aligned_cols=28 Identities=36% Similarity=0.586 Sum_probs=22.2
Q ss_pred eEEEEecCCeEEEEECCCCCCCcEEEEccCC
Q psy16230 188 KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHG 218 (292)
Q Consensus 188 ~v~V~r~~g~~~~i~~~~Lv~GDii~i~~~G 218 (292)
...+.++ +. .++.+.+|.+||.|.+ ..|
T Consensus 98 p~~~~~~-~~-~w~~a~~L~~Gd~l~~-~~g 125 (168)
T 4e2u_A 98 PVLLFRD-GL-QWVPAAEVKPGDVVVG-VRN 125 (168)
T ss_dssp EEEEESS-SE-EEEEGGGCCTTCEEEE-EET
T ss_pred cEEEEcC-CC-EEEEHHHCCCCCEEEe-ccC
Confidence 5666665 54 7789999999999999 466
No 32
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=27.54 E-value=28 Score=26.46 Aligned_cols=20 Identities=25% Similarity=0.640 Sum_probs=15.7
Q ss_pred EEEECCCCCCCcEEEEccCCC
Q psy16230 199 EEVPTTHLVPGDIIVIPKHGC 219 (292)
Q Consensus 199 ~~i~~~~Lv~GDii~i~~~G~ 219 (292)
..++.+++.|||+|.. ..+.
T Consensus 61 ~~v~~~~l~pGDLvff-~~~~ 80 (136)
T 2jyx_A 61 KSVSRSNLRTGDLVLF-RAGS 80 (136)
T ss_dssp EECCTTTCCTTEEEEE-ECSS
T ss_pred eEcchHhCCCCCEEEE-CCCC
Confidence 3567789999999999 5554
No 33
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=23.23 E-value=83 Score=29.67 Aligned_cols=27 Identities=33% Similarity=0.603 Sum_probs=23.0
Q ss_pred eEEEEecCCeEEEEECCCCCCCcEEEEc
Q psy16230 188 KVTVKRSKGLYEEVPTTHLVPGDIIVIP 215 (292)
Q Consensus 188 ~v~V~r~~g~~~~i~~~~Lv~GDii~i~ 215 (292)
.+.+.++ |+..++++.+|.+||.|.++
T Consensus 97 ~~l~~~~-g~~~~~~a~elk~GD~v~~~ 123 (537)
T 2cw8_A 97 SLFSVRN-GELVEVTGDELKPGDLVAVP 123 (537)
T ss_dssp EEEEEET-TEEEEEETTTCCTTCEEEEE
T ss_pred eEEEEEC-CEEEEEEhhcCCCCCEEEEe
Confidence 5556665 89999999999999999984
No 34
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=20.41 E-value=54 Score=23.72 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=15.9
Q ss_pred CCCCcEEEEc----cCCCEEeccEEEE
Q psy16230 206 LVPGDIIVIP----KHGCTLACDATLL 228 (292)
Q Consensus 206 Lv~GDii~i~----~~G~~iP~D~~ll 228 (292)
+.+||++.++ ++|+.|-.| +|+
T Consensus 14 V~~Gd~i~vekl~~~~G~~v~~~-VLl 39 (101)
T 3v2d_V 14 VEPGLKLRVEKLDAEPGATVELP-VLL 39 (101)
T ss_dssp ECTTCEEEESCCSCCTTCEEEEC-EEE
T ss_pred EeCCCEEEECCcCCCCCCEEEEE-EEE
Confidence 4578888884 367888888 654
Done!