Query psy16232
Match_columns 176
No_of_seqs 222 out of 1147
Neff 7.6
Searched_HMMs 29240
Date Sat Aug 17 00:15:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ohu_A Transcription regulator 99.9 5.3E-22 1.8E-26 143.8 10.3 94 4-97 21-116 (125)
2 2if5_A Zinc finger and BTB dom 99.9 8.6E-22 2.9E-26 141.7 9.3 94 4-97 14-110 (120)
3 3b84_A Zinc finger and BTB dom 99.9 5.3E-22 1.8E-26 143.0 8.0 92 4-97 13-105 (119)
4 2yy9_A Zinc finger and BTB dom 99.9 4E-22 1.4E-26 146.8 7.4 92 4-97 14-106 (135)
5 2ihc_A Transcription regulator 99.9 9.5E-22 3.3E-26 142.6 8.7 94 4-97 18-113 (124)
6 3fkc_A Transcriptional regulat 99.9 1.9E-21 6.7E-26 139.7 9.9 91 4-97 20-112 (116)
7 2z8h_A Transcription regulator 99.9 1.8E-21 6.2E-26 143.6 9.2 94 4-97 25-120 (138)
8 2vpk_A Myoneurin; transcriptio 99.9 1.7E-21 6E-26 139.4 8.8 92 4-97 11-105 (116)
9 3ga1_A Nucleus accumbens-assoc 99.8 2.7E-21 9.4E-26 141.0 9.4 92 4-97 22-115 (129)
10 1r29_A B-cell lymphoma 6 prote 99.8 3E-21 1E-25 140.2 9.2 94 4-97 18-114 (127)
11 1buo_A POZ domain, protein (pr 99.8 3E-21 1E-25 139.3 9.0 91 4-97 17-108 (121)
12 2ppi_A Gigaxonin; BTB domain, 99.8 2.7E-21 9.3E-26 144.0 7.6 94 4-97 36-134 (144)
13 2q81_A MIZ-1 protein; BTB/POZ 99.8 2.4E-21 8.3E-26 139.5 5.4 91 4-97 16-107 (119)
14 2vkp_A BTB/POZ domain-containi 99.8 5.9E-21 2E-25 134.8 6.4 88 9-97 2-96 (109)
15 4eoz_A Speckle-type POZ protei 99.8 2.4E-20 8.3E-25 137.5 5.9 95 3-97 13-110 (145)
16 3m5b_A Zinc finger and BTB dom 99.8 2.5E-20 8.4E-25 134.7 5.7 85 6-97 20-106 (119)
17 3htm_A Speckle-type POZ protei 99.8 7.1E-20 2.4E-24 138.6 8.3 94 4-97 23-119 (172)
18 3hve_A Gigaxonin; ubiquitin, c 99.8 2.2E-19 7.4E-24 144.6 5.8 93 5-97 21-118 (256)
19 3i3n_A Kelch-like protein 11; 99.7 6.7E-19 2.3E-23 143.5 5.0 94 4-97 21-126 (279)
20 3hqi_A Speckle-type POZ protei 99.7 3.4E-18 1.2E-22 141.1 9.2 94 4-97 163-259 (312)
21 4ajy_C Transcription elongatio 99.3 4.1E-12 1.4E-16 88.3 7.8 77 18-95 4-97 (97)
22 2ast_A S-phase kinase-associat 99.3 8.6E-12 2.9E-16 94.1 6.5 79 18-97 3-113 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 98.9 1.9E-09 6.4E-14 79.7 6.5 77 18-97 4-108 (141)
24 1hv2_A Elongin C, ELC1; protei 98.6 1.8E-07 6E-12 65.1 8.4 77 18-95 6-99 (99)
25 2fnj_C Transcription elongatio 98.6 8.2E-08 2.8E-12 66.4 6.2 77 18-95 3-96 (96)
26 2p1m_A SKP1-like protein 1A; F 98.6 2.7E-09 9.3E-14 80.4 -1.7 78 18-97 6-112 (160)
27 3drz_A BTB/POZ domain-containi 98.2 5.4E-06 1.9E-10 58.2 6.9 82 15-97 4-95 (107)
28 1vcb_B Protein (elongin C); tu 98.1 6.8E-06 2.3E-10 58.3 6.9 78 18-95 19-112 (112)
29 3v7d_A Suppressor of kinetocho 98.0 1.4E-05 5E-10 60.4 7.1 79 18-97 9-120 (169)
30 3kvt_A Potassium channel prote 97.2 0.00039 1.3E-08 49.3 4.2 81 18-99 7-93 (115)
31 3drx_A BTB/POZ domain-containi 97.1 0.00036 1.2E-08 54.2 3.8 85 12-97 7-101 (202)
32 1t1d_A Protein (potassium chan 96.6 0.00097 3.3E-08 46.1 2.3 79 18-97 3-88 (100)
33 1s1g_A Potassium voltage-gated 96.5 0.0036 1.2E-07 44.9 5.1 80 16-98 12-99 (124)
34 2nz0_B Potassium voltage-gated 96.3 0.006 2.1E-07 44.6 5.3 78 18-98 37-121 (140)
35 1nn7_A Potassium channel KV4.2 96.1 0.002 6.9E-08 44.8 1.8 80 18-98 2-86 (105)
36 2r9r_B Paddle chimera voltage 91.5 0.15 5.2E-06 44.5 4.1 82 15-97 50-139 (514)
37 2ckx_A NGTRF1, telomere bindin 26.1 45 0.0015 21.5 2.5 19 157-175 60-78 (83)
38 1gm6_A SAL, salivary lipocalin 22.1 59 0.002 23.1 2.8 42 69-110 120-161 (175)
39 1pd7_B MAD1; PAH2, SIN3, eukar 21.8 24 0.00081 17.8 0.3 13 82-94 4-16 (26)
40 3sao_A Extracellular fatty aci 20.9 1.1E+02 0.0037 21.3 4.0 42 69-110 111-152 (160)
No 1
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.87 E-value=5.3e-22 Score=143.82 Aligned_cols=94 Identities=16% Similarity=0.315 Sum_probs=88.2
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCC-CCHHHHHHHhhhhccCceecCHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKD-VQGWEIQAIVDFMYKGEISVGQD 81 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~-v~~~~~~~lL~fiYtg~i~i~~~ 81 (176)
+.++++++++.+.||++.++|+.|+|||+|||++ +||++||.+.+.....|.+++ +++++|+.+|+|+|||++.++.+
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~ 100 (125)
T 3ohu_A 21 LGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTARGFGPLLQFAYTAKLLLSRE 100 (125)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCSSCEEECCTTCCHHHHHHHHHHHTTSEEEECTT
T ss_pred HHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCCCcEEEeCCCCCHHHHHHHHHhHcCCceEECHH
Confidence 4567888888888899999999999999999999 999999998766688999998 99999999999999999999999
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
++.+++.+|++|++++
T Consensus 101 ~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 101 NIREVIRCAEFLRMHN 116 (125)
T ss_dssp THHHHHHHHHHHTBSS
T ss_pred HHHHHHHHHHHhCCHH
Confidence 9999999999999998
No 2
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.86 E-value=8.6e-22 Score=141.65 Aligned_cols=94 Identities=19% Similarity=0.337 Sum_probs=85.6
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcC--CCCCCCeEEeCCCCHHHHHHHhhhhccCceecCH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSE--TPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQ 80 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~--~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~ 80 (176)
+.+.+++.++.+.||++.++|+.|+|||+|||++ +||++||.+ .++....|.++++++++|+.+|+|+|||++.++.
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~ 93 (120)
T 2if5_A 14 SGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVST 93 (120)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCG
T ss_pred HHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 4567787888888899999999999999999999 999999998 4667789999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCc
Q psy16232 81 DQITSLIKAAENLQLPT 97 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v~~ 97 (176)
+++.+++.+|++|++++
T Consensus 94 ~~~~~ll~~A~~~~i~~ 110 (120)
T 2if5_A 94 ANVGDILSAARLLEIPA 110 (120)
T ss_dssp GGHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCHH
Confidence 99999999999999987
No 3
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.86 E-value=5.3e-22 Score=143.00 Aligned_cols=92 Identities=16% Similarity=0.278 Sum_probs=85.8
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCceecCHHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQDQ 82 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~~ 82 (176)
+.+++++.++.+.||++.++|+.|+|||+|||++ +||++||.++. ...|.++++++++|+.+|+|+|||++.++.++
T Consensus 13 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~--~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~ 90 (119)
T 3b84_A 13 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS--GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGN 90 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT--CCCEEECGGGHHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC--CCeEEeCCCCHHHHHHHHHHHcCCCCccCHHH
Confidence 4567788888888899999999999999999999 99999998754 67899999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCc
Q psy16232 83 ITSLIKAAENLQLPT 97 (176)
Q Consensus 83 v~~ll~aA~~l~v~~ 97 (176)
+.+++.+|++|++++
T Consensus 91 v~~ll~~A~~~~i~~ 105 (119)
T 3b84_A 91 RDQVLLAARELRVPE 105 (119)
T ss_dssp HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCcHH
Confidence 999999999999988
No 4
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.86 E-value=4e-22 Score=146.79 Aligned_cols=92 Identities=17% Similarity=0.294 Sum_probs=82.8
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCceecCHHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQDQ 82 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~~ 82 (176)
+.+++++.++.+.||+|.++|+.|+|||+|||++ +||++||.+.. ...|.++++++++|+.+|+|+|||++.++.++
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~--~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~ 91 (135)
T 2yy9_A 14 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT--GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGN 91 (135)
T ss_dssp HHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC------CCEEECGGGHHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC--CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHHH
Confidence 4567777777788899999999999999999999 99999998754 56899999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCc
Q psy16232 83 ITSLIKAAENLQLPT 97 (176)
Q Consensus 83 v~~ll~aA~~l~v~~ 97 (176)
+.+++.+|++|++++
T Consensus 92 v~~ll~~A~~l~i~~ 106 (135)
T 2yy9_A 92 RDQVLLAAKELRVPE 106 (135)
T ss_dssp HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCcHH
Confidence 999999999999999
No 5
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.86 E-value=9.5e-22 Score=142.62 Aligned_cols=94 Identities=14% Similarity=0.252 Sum_probs=85.5
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeC-CCCHHHHHHHhhhhccCceecCHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLK-DVQGWEIQAIVDFMYKGEISVGQD 81 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~-~v~~~~~~~lL~fiYtg~i~i~~~ 81 (176)
+.+++++.++.+.||++.++|+.|+|||+|||++ +||++||.+.......|.++ ++++++|+.+|+|+|||++.++.+
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~ 97 (124)
T 2ihc_A 18 LSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTVKGFEPLIQFAYTAKLILSKE 97 (124)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---CEEEECCTTSCHHHHHHHHHHHHHSEEEEETT
T ss_pred HHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCCceEeecCCcCHHHHHHHHHHhcCCCcccCHH
Confidence 4578888888888899999999999999999999 99999999866666789995 999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
++.+++.+|++|++++
T Consensus 98 ~v~~ll~~A~~~~~~~ 113 (124)
T 2ihc_A 98 NVDEVCKCVEFLSVHN 113 (124)
T ss_dssp THHHHHHHHHHHTBSS
T ss_pred HHHHHHHHHHHHCCHH
Confidence 9999999999999998
No 6
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.86 E-value=1.9e-21 Score=139.70 Aligned_cols=91 Identities=19% Similarity=0.279 Sum_probs=84.7
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCce-ecCHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGEI-SVGQD 81 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i-~i~~~ 81 (176)
+.+++++.++.+.||++.++|+.|+|||+|||++ +||+++|.++ ...|.++++++++|+.+|+|+|||++ .++.+
T Consensus 20 ~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~---~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~ 96 (116)
T 3fkc_A 20 NSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA---GQVVELSFIRAEIFAEILNYIYSSKIVRVRSD 96 (116)
T ss_dssp HHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHHHHHHHHHHHTTSCCCSCCHH
T ss_pred HHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC---CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHH
Confidence 4567888888888899999999999999999999 9999999875 67899999999999999999999999 79999
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
++.+++.+|++|++++
T Consensus 97 ~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 97 LLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhCccc
Confidence 9999999999999986
No 7
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.85 E-value=1.8e-21 Score=143.58 Aligned_cols=94 Identities=13% Similarity=0.273 Sum_probs=87.5
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeC-CCCHHHHHHHhhhhccCceecCHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLK-DVQGWEIQAIVDFMYKGEISVGQD 81 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~-~v~~~~~~~lL~fiYtg~i~i~~~ 81 (176)
+.+.+++.++.+.||+|.++|+.|+|||+|||++ +||++||.+.......|.++ ++++++|+.+|+|+|||++.++.+
T Consensus 25 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~ 104 (138)
T 2z8h_A 25 LSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTVKGFEPLIQFAYTAKLILSKD 104 (138)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTTEEEECCTTSCHHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCCceEEeCCCCCHHHHHHHHHHhcCCCcccCHH
Confidence 4578888888888899999999999999999999 99999999876666789995 899999999999999999999999
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
++.+++.+|++|++++
T Consensus 105 ~v~~ll~~A~~~~i~~ 120 (138)
T 2z8h_A 105 NVDEVCRCVEFLSVHN 120 (138)
T ss_dssp THHHHHHHHHHHTCGG
T ss_pred HHHHHHHHHHHhCCHH
Confidence 9999999999999999
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.7e-21 Score=139.37 Aligned_cols=92 Identities=17% Similarity=0.266 Sum_probs=85.4
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeC--CCCHHHHHHHhhhhccCceecCH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLK--DVQGWEIQAIVDFMYKGEISVGQ 80 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~--~v~~~~~~~lL~fiYtg~i~i~~ 80 (176)
+.+++++.++.+.||++.++|+.|+|||.|||++ +||++||.+. ....|.++ ++++++|+.+|+|+|||++.++.
T Consensus 11 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~ 88 (116)
T 2vpk_A 11 ERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST--SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS 88 (116)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC--CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC--CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCH
Confidence 4567888888888899999999999999999999 9999999876 46678888 99999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCc
Q psy16232 81 DQITSLIKAAENLQLPT 97 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v~~ 97 (176)
+++.+++.+|++|++++
T Consensus 89 ~~v~~ll~~A~~~~i~~ 105 (116)
T 2vpk_A 89 WNVKEIHQAADYLKVEE 105 (116)
T ss_dssp TTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCHH
Confidence 99999999999999987
No 9
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=140.99 Aligned_cols=92 Identities=22% Similarity=0.291 Sum_probs=85.6
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeC-CCCHHHHHHHhhhhccCceecCHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLK-DVQGWEIQAIVDFMYKGEISVGQD 81 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~-~v~~~~~~~lL~fiYtg~i~i~~~ 81 (176)
+.++++++++.+.||++.++|+.|+|||+|||++ +||++||.+. ....|.++ ++++++|+.+|+|+|||++.++.+
T Consensus 22 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~--~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~ 99 (129)
T 3ga1_A 22 ECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS--RSAVVELPAAVQPQSFQQILSFCYTGRLSMNVG 99 (129)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC--CCSEEECCTTCCHHHHHHHHHHHHHSEEECCTT
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC--CCCEEEECCCCCHHHHHHHHHHHhCCccccCHH
Confidence 4567777788888899999999999999999999 9999999876 67799996 999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
++.+++.+|++|++++
T Consensus 100 ~~~~ll~~A~~~~i~~ 115 (129)
T 3ga1_A 100 DQDLLMYTAGFLQIQE 115 (129)
T ss_dssp THHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHhCCHH
Confidence 9999999999999999
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.85 E-value=3e-21 Score=140.22 Aligned_cols=94 Identities=18% Similarity=0.309 Sum_probs=86.4
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCC-CCCeEEe-CCCCHHHHHHHhhhhccCceecCH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPC-KHPVIVL-KDVQGWEIQAIVDFMYKGEISVGQ 80 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~-~~~~I~l-~~v~~~~~~~lL~fiYtg~i~i~~ 80 (176)
+.+.+++.++.+.||++.++|+.|+|||+|||++ +||++||.+... ....|.+ +++++++|+.+|+|+|||++.++.
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~ 97 (127)
T 1r29_A 18 LNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLRE 97 (127)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCH
Confidence 4567787888888899999999999999999999 999999998432 6789999 899999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCc
Q psy16232 81 DQITSLIKAAENLQLPT 97 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v~~ 97 (176)
+++.+++.+|++|++++
T Consensus 98 ~~~~~ll~~A~~~~i~~ 114 (127)
T 1r29_A 98 GNIMAVMATAMYLQMEH 114 (127)
T ss_dssp TTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCHH
Confidence 99999999999999988
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.85 E-value=3e-21 Score=139.30 Aligned_cols=91 Identities=15% Similarity=0.222 Sum_probs=84.9
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCceecCHHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQDQ 82 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~~ 82 (176)
+.+++++.++.+.||++.++|+.|+|||+|||++ +||++||.++ ...|.++++++++|+.+|+|+|||++.++.++
T Consensus 17 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~ 93 (121)
T 1buo_A 17 CKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN---SQHYTLDFLSPKTFQQILEYAYTATLQAKAED 93 (121)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHHHHHHHHHHHHHSCCCCCGGG
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC---CcEEEeCCCCHHHHHHHHHhhcCCCcCCCHHH
Confidence 4567888888888899999999999999999999 9999999863 56899999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCc
Q psy16232 83 ITSLIKAAENLQLPT 97 (176)
Q Consensus 83 v~~ll~aA~~l~v~~ 97 (176)
+.+++.+|++|++++
T Consensus 94 ~~~ll~~A~~~~i~~ 108 (121)
T 1buo_A 94 LDDLLYAAEILEIEY 108 (121)
T ss_dssp HHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHCCHH
Confidence 999999999999988
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.84 E-value=2.7e-21 Score=143.95 Aligned_cols=94 Identities=19% Similarity=0.280 Sum_probs=83.0
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhhccCceec
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSET----PCKHPVIVLKDVQGWEIQAIVDFMYKGEISV 78 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~----e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i 78 (176)
+.+.+++.++.+.||+|.++|+.|+|||+|||++ +||++||.+. ++....|.++++++++|+.+|+|+|||++.+
T Consensus 36 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i 115 (144)
T 2ppi_A 36 RALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRL 115 (144)
T ss_dssp HHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCC
Confidence 3456666767777799999999999999999999 9999999873 2567899999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCc
Q psy16232 79 GQDQITSLIKAAENLQLPT 97 (176)
Q Consensus 79 ~~~~v~~ll~aA~~l~v~~ 97 (176)
+.+++.+++.+|++|++++
T Consensus 116 ~~~~v~~ll~~A~~l~i~~ 134 (144)
T 2ppi_A 116 NEDTIQDVVQAADLLLLTD 134 (144)
T ss_dssp CTTTHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHhCcHH
Confidence 9999999999999999988
No 13
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.83 E-value=2.4e-21 Score=139.52 Aligned_cols=91 Identities=18% Similarity=0.341 Sum_probs=84.0
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCceecCHHH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQDQ 82 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~~ 82 (176)
+.+++++.++.+.||++.++|+.|+|||.|||++ +||++||.+ ...+|.++++++++|+.+|+|+|||++.++.++
T Consensus 16 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~---~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~ 92 (119)
T 2q81_A 16 EQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD---QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPEN 92 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH---CCSGGGGGGCCHHHHHHHHHHHHHSCCCCCTTT
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC---CCCEEEeCCCCHHHHHHHHHHHcCCCCccCHHH
Confidence 4567788888888899999999999999999999 999999986 345788899999999999999999999999999
Q ss_pred HHHHHHHhhcccCCc
Q psy16232 83 ITSLIKAAENLQLPT 97 (176)
Q Consensus 83 v~~ll~aA~~l~v~~ 97 (176)
+.+++.+|++|++++
T Consensus 93 ~~~ll~~A~~l~i~~ 107 (119)
T 2q81_A 93 VDDVLAVATFLQMQD 107 (119)
T ss_dssp HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCCHH
Confidence 999999999999988
No 14
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.83 E-value=5.9e-21 Score=134.81 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=78.3
Q ss_pred HHhcCCCCcEEEEeCC----eEEEeehhhhcch-HHHHHhhcCC--CCCCCeEEeCCCCHHHHHHHhhhhccCceecCHH
Q psy16232 9 VKRTERIPCPAAVGFS----TNIKGDLCSLSLC-PYFQKIFSET--PCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD 81 (176)
Q Consensus 9 l~r~~~~~dv~l~v~~----~~f~aHr~VLaa~-~yF~~lf~~~--e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~ 81 (176)
++.++.+.||++.++| +.|+|||.|||++ +||++||.+. ++. ..|.++++++++|+.+|+|+|||++.++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 3456667779999988 8999999999999 9999999983 445 899999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
++.+++.+|++|++++
T Consensus 81 ~~~~ll~~A~~~~~~~ 96 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPA 96 (109)
T ss_dssp THHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCcHH
Confidence 9999999999999988
No 15
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.81 E-value=2.4e-20 Score=137.51 Aligned_cols=95 Identities=16% Similarity=0.233 Sum_probs=88.0
Q ss_pred hhhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCC--CCCCCeEEeCCCCHHHHHHHhhhhccCceecC
Q psy16232 3 TSKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSET--PCKHPVIVLKDVQGWEIQAIVDFMYKGEISVG 79 (176)
Q Consensus 3 ~s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~--e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~ 79 (176)
.+.+.+++.++.+.||++.++|+.|+|||.||+++ +||++||.+. ++....|.++++++++|+.+|+|+|||++.++
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~ 92 (145)
T 4eoz_A 13 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL 92 (145)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTG
T ss_pred HHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCc
Confidence 35678888999999999999999999999999999 9999999974 44557999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCc
Q psy16232 80 QDQITSLIKAAENLQLPT 97 (176)
Q Consensus 80 ~~~v~~ll~aA~~l~v~~ 97 (176)
.+++.+++.+|++|++++
T Consensus 93 ~~~~~~ll~~A~~~~~~~ 110 (145)
T 4eoz_A 93 DKMADDLLAAADKYALER 110 (145)
T ss_dssp GGTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhCHHH
Confidence 999999999999999998
No 16
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.80 E-value=2.5e-20 Score=134.75 Aligned_cols=85 Identities=11% Similarity=0.103 Sum_probs=76.0
Q ss_pred HHHHHhcCCCC-cEEEEeCCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCceecCHHHH
Q psy16232 6 TEDVKRTERIP-CPAAVGFSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQDQI 83 (176)
Q Consensus 6 ~~~l~r~~~~~-dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~~v 83 (176)
+..+.|.++.+ ||++.++|+.|+|||+|||++ +||++ ....|.++++++++|+.+|+|+|||++.++.+++
T Consensus 20 l~~l~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v 92 (119)
T 3m5b_A 20 VQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR-------RGQWALGEGISPSTFAQLLNFVYGESVELQPGEL 92 (119)
T ss_dssp HHHHHHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGH
T ss_pred HHHHHHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHH
Confidence 34455665544 599999999999999999999 99985 3568899999999999999999999999999999
Q ss_pred HHHHHHhhcccCCc
Q psy16232 84 TSLIKAAENLQLPT 97 (176)
Q Consensus 84 ~~ll~aA~~l~v~~ 97 (176)
.+++.+|++|++++
T Consensus 93 ~~ll~aA~~l~i~~ 106 (119)
T 3m5b_A 93 RPLQEAARALGVQS 106 (119)
T ss_dssp HHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhCCHH
Confidence 99999999999988
No 17
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.80 E-value=7.1e-20 Score=138.60 Aligned_cols=94 Identities=16% Similarity=0.234 Sum_probs=88.4
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcC--CCCCCCeEEeCCCCHHHHHHHhhhhccCceecCH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSE--TPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQ 80 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~--~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~ 80 (176)
+.+.+++.++.+.||++.++|+.|+|||.||+++ +||++||.+ .++....|.++++++++|+.+|+|+|||++.++.
T Consensus 23 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~ 102 (172)
T 3htm_A 23 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD 102 (172)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGG
T ss_pred HHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcH
Confidence 5678888899999999999999999999999999 999999998 4566789999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCc
Q psy16232 81 DQITSLIKAAENLQLPT 97 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v~~ 97 (176)
+++.+++.+|++|++++
T Consensus 103 ~~~~~ll~~A~~~~~~~ 119 (172)
T 3htm_A 103 KMADDLLAAADKYALER 119 (172)
T ss_dssp GTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHH
Confidence 99999999999999998
No 18
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.77 E-value=2.2e-19 Score=144.59 Aligned_cols=93 Identities=19% Similarity=0.284 Sum_probs=77.9
Q ss_pred hHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhhccCceecC
Q psy16232 5 KTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSET----PCKHPVIVLKDVQGWEIQAIVDFMYKGEISVG 79 (176)
Q Consensus 5 ~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~~----e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~ 79 (176)
.+++++.++.+.||++.++|+.|+|||+|||++ +||++||.++ ++....|.++++++++|+.+++|+|||++.++
T Consensus 21 ~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~ 100 (256)
T 3hve_A 21 ALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN 100 (256)
T ss_dssp HHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCccc
Confidence 445566666777799999999999999999999 9999999873 45678999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCc
Q psy16232 80 QDQITSLIKAAENLQLPT 97 (176)
Q Consensus 80 ~~~v~~ll~aA~~l~v~~ 97 (176)
.+++.+++.+|++|++++
T Consensus 101 ~~~v~~ll~~A~~l~i~~ 118 (256)
T 3hve_A 101 EDTIQDVVQAADLLLLTD 118 (256)
T ss_dssp -CCHHHHHHHHHHHTCHH
T ss_pred HhHHHHHHHHHHHHChHH
Confidence 999999999999999998
No 19
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.75 E-value=6.7e-19 Score=143.46 Aligned_cols=94 Identities=14% Similarity=0.273 Sum_probs=81.9
Q ss_pred hhHHHHHhcCCCCcEEEEeC---CeEEEeehhhhcch-HHHHHhhcC--CCCCCCeEEeC------CCCHHHHHHHhhhh
Q psy16232 4 SKTEDVKRTERIPCPAAVGF---STNIKGDLCSLSLC-PYFQKIFSE--TPCKHPVIVLK------DVQGWEIQAIVDFM 71 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~---~~~f~aHr~VLaa~-~yF~~lf~~--~e~~~~~I~l~------~v~~~~~~~lL~fi 71 (176)
..++++++++.+.||++.++ |+.|+|||+|||++ +||++||.+ .++....|.++ ++++++|+.+|+|+
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~ 100 (279)
T 3i3n_A 21 WRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYM 100 (279)
T ss_dssp HHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhh
Confidence 45677878888888999998 99999999999999 999999998 46777899998 89999999999999
Q ss_pred ccCceecCHHHHHHHHHHhhcccCCc
Q psy16232 72 YKGEISVGQDQITSLIKAAENLQLPT 97 (176)
Q Consensus 72 Ytg~i~i~~~~v~~ll~aA~~l~v~~ 97 (176)
|||++.++.+++.+++.+|++|++++
T Consensus 101 Ytg~~~i~~~~v~~ll~~A~~l~i~~ 126 (279)
T 3i3n_A 101 YTGRIRVSTGSVHEVLELADRFLLIR 126 (279)
T ss_dssp HHSEEEEETTTHHHHHHHHHHTTCHH
T ss_pred CcCCcccCHHHHHHHHHHHHHHCcHH
Confidence 99999999999999999999999998
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.74 E-value=3.4e-18 Score=141.09 Aligned_cols=94 Identities=16% Similarity=0.234 Sum_probs=86.6
Q ss_pred hhHHHHHhcCCCCcEEEEeCCeEEEeehhhhcch-HHHHHhhcC--CCCCCCeEEeCCCCHHHHHHHhhhhccCceecCH
Q psy16232 4 SKTEDVKRTERIPCPAAVGFSTNIKGDLCSLSLC-PYFQKIFSE--TPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQ 80 (176)
Q Consensus 4 s~~~~l~r~~~~~dv~l~v~~~~f~aHr~VLaa~-~yF~~lf~~--~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~ 80 (176)
..|.+++.++.+.||+|.++|+.|+|||+|||++ +||++||.+ .++...+|.++++++++|+.+|+|+|||++.+..
T Consensus 163 ~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~ 242 (312)
T 3hqi_A 163 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD 242 (312)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHH
T ss_pred HHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChH
Confidence 4578888888899999999999999999999999 999999987 5677889999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCc
Q psy16232 81 DQITSLIKAAENLQLPT 97 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v~~ 97 (176)
+++.+++.+|++|+++.
T Consensus 243 ~~~~~ll~~A~~~~~~~ 259 (312)
T 3hqi_A 243 KMADDLLAAADKYALER 259 (312)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCHHH
Confidence 99999999999999998
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.32 E-value=4.1e-12 Score=88.32 Aligned_cols=77 Identities=10% Similarity=0.132 Sum_probs=65.0
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcC----CCCCCCeEEeCCCCHHHHHHHhhhhc-----c---Ccee---cCH
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSE----TPCKHPVIVLKDVQGWEIQAIVDFMY-----K---GEIS---VGQ 80 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~----~e~~~~~I~l~~v~~~~~~~lL~fiY-----t---g~i~---i~~ 80 (176)
|+|.. ||..|.+||.| |++ +||++||.+ .|+....|.++++++.+++.+++|+| + +++. ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 56665 78999999999 888 999999986 24567899999999999999999999 5 6776 899
Q ss_pred HHHHHHHHHhhcccC
Q psy16232 81 DQITSLIKAAENLQL 95 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v 95 (176)
+++.+|+.||++|+.
T Consensus 83 ~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 EIALELLMAANFLDC 97 (97)
T ss_dssp GGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhCC
Confidence 999999999999973
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.25 E-value=8.6e-12 Score=94.07 Aligned_cols=79 Identities=13% Similarity=0.127 Sum_probs=68.5
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcC-C---CCCCCeEEeCCCCHHHHHHHhhhhccCc----------------
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSE-T---PCKHPVIVLKDVQGWEIQAIVDFMYKGE---------------- 75 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~-~---e~~~~~I~l~~v~~~~~~~lL~fiYtg~---------------- 75 (176)
|+|.. +|..|.+||.+ |++ +||++||.+ . ++....|.|++|++.+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 89999999999 788 999999986 2 4555789999999999999999999998
Q ss_pred ----------eecCHHHHHHHHHHhhcccCCc
Q psy16232 76 ----------ISVGQDQITSLIKAAENLQLPT 97 (176)
Q Consensus 76 ----------i~i~~~~v~~ll~aA~~l~v~~ 97 (176)
+.++.+++.+|+.||++|++++
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~ 113 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKG 113 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH
Confidence 7889999999999999999998
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.92 E-value=1.9e-09 Score=79.71 Aligned_cols=77 Identities=13% Similarity=0.124 Sum_probs=68.8
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCc--------------------
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGE-------------------- 75 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~-------------------- 75 (176)
|+|.. +|..|.+||.+ |.+ .+++.|+.+.. ...|.++++++.+++.+++|+|.+.
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~ 80 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIP 80 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhh
Confidence 67776 88999999998 777 99999998632 5689999999999999999999876
Q ss_pred ------eecCHHHHHHHHHHhhcccCCc
Q psy16232 76 ------ISVGQDQITSLIKAAENLQLPT 97 (176)
Q Consensus 76 ------i~i~~~~v~~ll~aA~~l~v~~ 97 (176)
+.++.+++.+|+.||++|++++
T Consensus 81 ~wD~~F~~vd~~~l~eLi~AAnyL~I~~ 108 (141)
T 1fs1_B 81 VWDQEFLKVDQGTLFELILAANYLDIKG 108 (141)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhhhH
Confidence 6788899999999999999998
No 24
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.62 E-value=1.8e-07 Score=65.06 Aligned_cols=77 Identities=13% Similarity=0.177 Sum_probs=65.8
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcCC-CCCCCeEEeCCCCHHHHHHHhhhhccCc--------------eecCH
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSET-PCKHPVIVLKDVQGWEIQAIVDFMYKGE--------------ISVGQ 80 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~~-e~~~~~I~l~~v~~~~~~~lL~fiYtg~--------------i~i~~ 80 (176)
|+|.. +|..|.+++.+ |.+ .+++.|+.+. +.....|.++++++.+++.+++|+|... ..++.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~ 84 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPT 84 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCCH
Confidence 77876 89999999997 666 9999999862 3344789999999999999999998754 36788
Q ss_pred HHHHHHHHHhhcccC
Q psy16232 81 DQITSLIKAAENLQL 95 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v 95 (176)
+.+.+|+.||++|++
T Consensus 85 ~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 85 EMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCc
Confidence 999999999999975
No 25
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.60 E-value=8.2e-08 Score=66.37 Aligned_cols=77 Identities=8% Similarity=0.085 Sum_probs=63.2
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcC----CCCCCCeEEeCCCCHHHHHHHhhhhccCc-----------eecCH
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSE----TPCKHPVIVLKDVQGWEIQAIVDFMYKGE-----------ISVGQ 80 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~----~e~~~~~I~l~~v~~~~~~~lL~fiYtg~-----------i~i~~ 80 (176)
|+|.. +|..|.++|.+ |.+ .+++.|+.+ .+.....|.++++++.+++.+++|+|... ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 56666 89999999997 666 999999986 24445689999999999999999998754 36788
Q ss_pred HHHHHHHHHhhcccC
Q psy16232 81 DQITSLIKAAENLQL 95 (176)
Q Consensus 81 ~~v~~ll~aA~~l~v 95 (176)
+.+.+|+.||++|++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999975
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.59 E-value=2.7e-09 Score=80.42 Aligned_cols=78 Identities=13% Similarity=0.201 Sum_probs=38.4
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhhccCc--------------------
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSETPCKHPVIVLKDVQGWEIQAIVDFMYKGE-------------------- 75 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~~e~~~~~I~l~~v~~~~~~~lL~fiYtg~-------------------- 75 (176)
|+|.. +|..|.+|+.+ |.+ .+|+.||.+. .....|.|++|++.+++.+++|+|.+.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~-~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i 83 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDD-CVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDL 83 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC-------------CCTTSCHHHHHHHHHC-------------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHcc-CCCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccchh
Confidence 67765 89999999999 677 9999999863 234579999999999999999999986
Q ss_pred -------eecCHHHHHHHHHHhhcccCCc
Q psy16232 76 -------ISVGQDQITSLIKAAENLQLPT 97 (176)
Q Consensus 76 -------i~i~~~~v~~ll~aA~~l~v~~ 97 (176)
+.++.+++.+|+.||++|+|++
T Consensus 84 ~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~ 112 (160)
T 2p1m_A 84 KAWDADFMKIDQATLFELILAANYLNIKN 112 (160)
T ss_dssp -----------------CHHHHHHTTCHH
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHhHHH
Confidence 3577888999999999999998
No 27
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.15 E-value=5.4e-06 Score=58.15 Aligned_cols=82 Identities=9% Similarity=0.132 Sum_probs=67.0
Q ss_pred CCc-EEEEeCCeEEEeehhhhcch--HHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhhhhccCceecCHH-HHH
Q psy16232 15 IPC-PAAVGFSTNIKGDLCSLSLC--PYFQKIFSET------PCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD-QIT 84 (176)
Q Consensus 15 ~~d-v~l~v~~~~f~aHr~VLaa~--~yF~~lf~~~------e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~-~v~ 84 (176)
... |+|.|||+.|...+..|+.. .+|.+||... ......+.+ |-++..|+.||+|+.+|++.++.+ ...
T Consensus 4 ~~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~ 82 (107)
T 3drz_A 4 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEE 82 (107)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHH
T ss_pred CCCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHH
Confidence 345 99999999999999999988 6899998753 123445655 789999999999999999987654 357
Q ss_pred HHHHHhhcccCCc
Q psy16232 85 SLIKAAENLQLPT 97 (176)
Q Consensus 85 ~ll~aA~~l~v~~ 97 (176)
.+++-|++|++++
T Consensus 83 ~l~~Ea~fy~l~~ 95 (107)
T 3drz_A 83 GVLEEAEFYNITS 95 (107)
T ss_dssp HHHHHHHHHTCHH
T ss_pred HHHHHHHHCCCHH
Confidence 8999999999987
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.12 E-value=6.8e-06 Score=58.25 Aligned_cols=78 Identities=6% Similarity=0.043 Sum_probs=63.0
Q ss_pred EEEE-eCCeEEEeehhhhcchHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhhccCc-----------eecCHH
Q psy16232 18 PAAV-GFSTNIKGDLCSLSLCPYFQKIFSET----PCKHPVIVLKDVQGWEIQAIVDFMYKGE-----------ISVGQD 81 (176)
Q Consensus 18 v~l~-v~~~~f~aHr~VLaa~~yF~~lf~~~----e~~~~~I~l~~v~~~~~~~lL~fiYtg~-----------i~i~~~ 81 (176)
|+|. .+|..|.+++.+...+..++.|+... +.....|.|++|+..+++.+++|++... ..++.+
T Consensus 19 v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~ 98 (112)
T 1vcb_B 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPE 98 (112)
T ss_dssp EEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCCHH
T ss_pred EEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccCHH
Confidence 8887 48899999999643339999999852 3334689999999999999999997654 367889
Q ss_pred HHHHHHHHhhcccC
Q psy16232 82 QITSLIKAAENLQL 95 (176)
Q Consensus 82 ~v~~ll~aA~~l~v 95 (176)
.+.+|+.||++|++
T Consensus 99 ~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 99 IALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999975
No 29
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.00 E-value=1.4e-05 Score=60.45 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=64.0
Q ss_pred EEEEe-CCeEEEeehhhhcch-HHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhhhhccCc--------------
Q psy16232 18 PAAVG-FSTNIKGDLCSLSLC-PYFQKIFSETP------CKHPVIVLKDVQGWEIQAIVDFMYKGE-------------- 75 (176)
Q Consensus 18 v~l~v-~~~~f~aHr~VLaa~-~yF~~lf~~~e------~~~~~I~l~~v~~~~~~~lL~fiYtg~-------------- 75 (176)
|+|.. +|..|.+++.+ |.+ .+++.|+.... .....|.|++|+..+++.+++|++...
T Consensus 9 i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~~ 87 (169)
T 3v7d_A 9 VVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRK 87 (169)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 77766 78899999998 555 99999998621 223789999999999999999997643
Q ss_pred -----------eecCHHHHHHHHHHhhcccCCc
Q psy16232 76 -----------ISVGQDQITSLIKAAENLQLPT 97 (176)
Q Consensus 76 -----------i~i~~~~v~~ll~aA~~l~v~~ 97 (176)
+.++.+.+.+|+.||++|+|++
T Consensus 88 ~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~ 120 (169)
T 3v7d_A 88 SAPVDSWDREFLKVDQEMLYEIILAANYLNIKP 120 (169)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH
T ss_pred cccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH
Confidence 2466788999999999999998
No 30
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=97.16 E-value=0.00039 Score=49.33 Aligned_cols=81 Identities=10% Similarity=-0.025 Sum_probs=65.3
Q ss_pred EEEEeCCeEEEeehhhhcch--HHHHHhhcCCC---CCCCeEEeCCCCHHHHHHHhhhhccCceecCHH-HHHHHHHHhh
Q psy16232 18 PAAVGFSTNIKGDLCSLSLC--PYFQKIFSETP---CKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD-QITSLIKAAE 91 (176)
Q Consensus 18 v~l~v~~~~f~aHr~VLaa~--~yF~~lf~~~e---~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~-~v~~ll~aA~ 91 (176)
|+|.|||..|...+..|+.. ..+.+|+.... .....+-+ |=++..|+.||+|+.+|++.++.+ .+..+++-|+
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~ 85 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELE 85 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHH
Confidence 89999999999999999988 56677776421 23455655 568899999999999999977653 4678999999
Q ss_pred cccCCccc
Q psy16232 92 NLQLPTQQ 99 (176)
Q Consensus 92 ~l~v~~~~ 99 (176)
+|+++...
T Consensus 86 fy~i~~~~ 93 (115)
T 3kvt_A 86 FWGLDSNQ 93 (115)
T ss_dssp HHTCCGGG
T ss_pred HhCCChHH
Confidence 99999943
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.10 E-value=0.00036 Score=54.19 Aligned_cols=85 Identities=9% Similarity=0.156 Sum_probs=68.0
Q ss_pred cCCCCc-EEEEeCCeEEEeehhhhcch--HHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhhhhccCceecCHH-
Q psy16232 12 TERIPC-PAAVGFSTNIKGDLCSLSLC--PYFQKIFSETP------CKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD- 81 (176)
Q Consensus 12 ~~~~~d-v~l~v~~~~f~aHr~VLaa~--~yF~~lf~~~e------~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~- 81 (176)
.++..+ |+|.|||..|..-+..|... .+|..||.+.. .....+.+ |-++..|+.||+|+-+|++.++.+
T Consensus 7 ~g~~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~ 85 (202)
T 3drx_A 7 PGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDL 85 (202)
T ss_dssp SSCCCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTS
T ss_pred CCCCCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCC
Confidence 344555 99999999999999999987 58899987531 12345555 568999999999999999987654
Q ss_pred HHHHHHHHhhcccCCc
Q psy16232 82 QITSLIKAAENLQLPT 97 (176)
Q Consensus 82 ~v~~ll~aA~~l~v~~ 97 (176)
....+++-|++|++.+
T Consensus 86 ~~~~l~eEA~FygL~~ 101 (202)
T 3drx_A 86 AEEGVLEEAEFYNITS 101 (202)
T ss_dssp CHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHCCcHH
Confidence 3467999999999998
No 32
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=96.57 E-value=0.00097 Score=46.08 Aligned_cols=79 Identities=10% Similarity=0.036 Sum_probs=61.6
Q ss_pred EEEEeCCeEEEeehhhhcch--HHHHHhhcCC---CCCCCeEEeCCCCHHHHHHHhhhhcc-CceecCHH-HHHHHHHHh
Q psy16232 18 PAAVGFSTNIKGDLCSLSLC--PYFQKIFSET---PCKHPVIVLKDVQGWEIQAIVDFMYK-GEISVGQD-QITSLIKAA 90 (176)
Q Consensus 18 v~l~v~~~~f~aHr~VLaa~--~yF~~lf~~~---e~~~~~I~l~~v~~~~~~~lL~fiYt-g~i~i~~~-~v~~ll~aA 90 (176)
|+|.|||..|...+..|+.. ..+.+++... ......+-+ |=++..|+.||+|+-+ |++.++.+ .+..+++-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 78999999999999999776 4555555421 123456666 5688999999999998 89877644 468899999
Q ss_pred hcccCCc
Q psy16232 91 ENLQLPT 97 (176)
Q Consensus 91 ~~l~v~~ 97 (176)
++|++..
T Consensus 82 ~fy~i~~ 88 (100)
T 1t1d_A 82 KFYELGE 88 (100)
T ss_dssp HHTTCCH
T ss_pred HHcCCCH
Confidence 9999987
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.54 E-value=0.0036 Score=44.88 Aligned_cols=80 Identities=8% Similarity=-0.008 Sum_probs=61.1
Q ss_pred Cc-EEEEeCCeEEEeehhhhcch-H-HHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhhccCceecCHH-HHHHHH
Q psy16232 16 PC-PAAVGFSTNIKGDLCSLSLC-P-YFQKIFSET----PCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD-QITSLI 87 (176)
Q Consensus 16 ~d-v~l~v~~~~f~aHr~VLaa~-~-yF~~lf~~~----e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~-~v~~ll 87 (176)
.+ |+|.|||..|..-+..|... + .+.. ... ......+.+ |=++..|+.||+|+-+|++.++.+ .+..++
T Consensus 12 ~~~V~LNVGG~~F~t~~~TL~~~p~S~L~~--~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 88 (124)
T 1s1g_A 12 DELIVLNVSGRRFQTWRTTLERYPDTLLGS--TEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYD 88 (124)
T ss_dssp CCEEEEEETTEEEEEEHHHHTTSTTSSTTS--SGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred CCEEEEEeCCEEEEEeHHHHhcCCCceecc--cCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 34 99999999999999999876 4 2222 111 123345555 559999999999999999987654 478899
Q ss_pred HHhhcccCCcc
Q psy16232 88 KAAENLQLPTQ 98 (176)
Q Consensus 88 ~aA~~l~v~~~ 98 (176)
+-|++|+++..
T Consensus 89 ~Ea~fy~i~~l 99 (124)
T 1s1g_A 89 DELAFYGILPE 99 (124)
T ss_dssp HHHHHTTCCGG
T ss_pred HHHHHcCCChH
Confidence 99999999983
No 34
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=96.31 E-value=0.006 Score=44.58 Aligned_cols=78 Identities=8% Similarity=0.007 Sum_probs=60.4
Q ss_pred EEEEeCCeEEEeehhhhcch-H-HHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhhccCceecCHH-HHHHHHHHh
Q psy16232 18 PAAVGFSTNIKGDLCSLSLC-P-YFQKIFSET----PCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD-QITSLIKAA 90 (176)
Q Consensus 18 v~l~v~~~~f~aHr~VLaa~-~-yF~~lf~~~----e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~-~v~~ll~aA 90 (176)
|+|.|||..|..-+..|... + .+.. ... ......+.+ |=++..|+.||+|+-+|++.++.+ .+..+++-|
T Consensus 37 V~LNVGG~~F~T~~~TL~~~P~S~L~~--~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa 113 (140)
T 2nz0_B 37 IVLNVSGRRFQTWRTTLERYPDTLLGS--TEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDEL 113 (140)
T ss_dssp EEEEETTEEEEEEHHHHHTCTTSTTTS--GGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCeeecc--cCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHH
Confidence 99999999999999999876 4 2222 111 123445555 569999999999999999987654 478899999
Q ss_pred hcccCCcc
Q psy16232 91 ENLQLPTQ 98 (176)
Q Consensus 91 ~~l~v~~~ 98 (176)
++|+|+..
T Consensus 114 ~fy~i~~l 121 (140)
T 2nz0_B 114 AFYGILPE 121 (140)
T ss_dssp HHHTCCGG
T ss_pred HHcCCChH
Confidence 99999983
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=96.12 E-value=0.002 Score=44.77 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=59.1
Q ss_pred EEEEeCCeEEEeehhhhcch-H-HHHHhhcC--CCCCCCeEEeCCCCHHHHHHHhhhhccCceecCHH-HHHHHHHHhhc
Q psy16232 18 PAAVGFSTNIKGDLCSLSLC-P-YFQKIFSE--TPCKHPVIVLKDVQGWEIQAIVDFMYKGEISVGQD-QITSLIKAAEN 92 (176)
Q Consensus 18 v~l~v~~~~f~aHr~VLaa~-~-yF~~lf~~--~e~~~~~I~l~~v~~~~~~~lL~fiYtg~i~i~~~-~v~~ll~aA~~ 92 (176)
|+|.|||..|...+..|... + .+.+.-.. .......+.+ |=++..|+.||+|+-+|++.++.+ .+..+++-|++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~f 80 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDTLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAF 80 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSSSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHH
Confidence 68999999999999999876 3 33221000 0112345555 458999999999999999987654 47889999999
Q ss_pred ccCCcc
Q psy16232 93 LQLPTQ 98 (176)
Q Consensus 93 l~v~~~ 98 (176)
|+++..
T Consensus 81 y~i~~l 86 (105)
T 1nn7_A 81 FGLIPE 86 (105)
T ss_dssp HTCCSC
T ss_pred cCCCHH
Confidence 999983
No 36
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=91.51 E-value=0.15 Score=44.50 Aligned_cols=82 Identities=9% Similarity=-0.010 Sum_probs=61.3
Q ss_pred CCc-EEEEeCCeEEEeehhhhcch--HHHHHhhcCC---CCCCCeEEeCCCCHHHHHHHhhhhcc-CceecCHH-HHHHH
Q psy16232 15 IPC-PAAVGFSTNIKGDLCSLSLC--PYFQKIFSET---PCKHPVIVLKDVQGWEIQAIVDFMYK-GEISVGQD-QITSL 86 (176)
Q Consensus 15 ~~d-v~l~v~~~~f~aHr~VLaa~--~yF~~lf~~~---e~~~~~I~l~~v~~~~~~~lL~fiYt-g~i~i~~~-~v~~l 86 (176)
..+ |+|.|||..|...+..|+.. ..+..++... .....++-+ |=++..|+.+|+|+.+ |++..+.+ ....+
T Consensus 50 ~~~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~ 128 (514)
T 2r9r_B 50 SSERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIF 128 (514)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHH
T ss_pred CCCEEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHH
Confidence 345 99999999999999999866 3333333211 123455665 6799999999999999 99877654 35678
Q ss_pred HHHhhcccCCc
Q psy16232 87 IKAAENLQLPT 97 (176)
Q Consensus 87 l~aA~~l~v~~ 97 (176)
++=|++|++.+
T Consensus 129 ~~E~~f~~i~~ 139 (514)
T 2r9r_B 129 SEEIRFYELGE 139 (514)
T ss_dssp HHHHHHTTCCH
T ss_pred HHHHHhcCCCH
Confidence 89999999988
No 37
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=26.08 E-value=45 Score=21.50 Aligned_cols=19 Identities=32% Similarity=0.579 Sum_probs=16.3
Q ss_pred ccCCcccHHHHHHHHhhhC
Q psy16232 157 KIMTPIPQSFFLKVLRLHG 175 (176)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~ 175 (176)
+--+|||.++.++|+++|.
T Consensus 60 ~~~~~~p~~~~~rv~~~~a 78 (83)
T 2ckx_A 60 RRGEPVPQDLLDRVLAAHA 78 (83)
T ss_dssp CCSSCCCHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHH
Confidence 4468999999999999984
No 38
>1gm6_A SAL, salivary lipocalin; odorant-binding protein; HET: NAG; 2.13A {Sus scrofa} SCOP: b.60.1.1
Probab=22.10 E-value=59 Score=23.15 Aligned_cols=42 Identities=7% Similarity=0.012 Sum_probs=29.6
Q ss_pred hhhccCceecCHHHHHHHHHHhhcccCCcccccccccCCCCC
Q psy16232 69 DFMYKGEISVGQDQITSLIKAAENLQLPTQQLFVLSFGYIPL 110 (176)
Q Consensus 69 ~fiYtg~i~i~~~~v~~ll~aA~~l~v~~~~~~~~~~~~~~~ 110 (176)
-++|+-+..++++....+...|..++++...+......+.|.
T Consensus 120 ~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~ 161 (175)
T 1gm6_A 120 MEFYGRKPDVEPKLKDKFVEICQQYGIIKENIIDLTKIDRCF 161 (175)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHTTTCCGGGEEEGGGSCCCG
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCc
Confidence 355666678888999999999999999884443333333443
No 39
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=21.81 E-value=24 Score=17.83 Aligned_cols=13 Identities=38% Similarity=0.593 Sum_probs=10.9
Q ss_pred HHHHHHHHhhccc
Q psy16232 82 QITSLIKAAENLQ 94 (176)
Q Consensus 82 ~v~~ll~aA~~l~ 94 (176)
+++.+|+||+++.
T Consensus 4 nvq~LLeAAeyLE 16 (26)
T 1pd7_B 4 NIQMLLEAADYLE 16 (26)
T ss_dssp STHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6788999999885
No 40
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=20.91 E-value=1.1e+02 Score=21.34 Aligned_cols=42 Identities=14% Similarity=0.051 Sum_probs=31.3
Q ss_pred hhhccCceecCHHHHHHHHHHhhcccCCcccccccccCCCCC
Q psy16232 69 DFMYKGEISVGQDQITSLIKAAENLQLPTQQLFVLSFGYIPL 110 (176)
Q Consensus 69 ~fiYtg~i~i~~~~v~~ll~aA~~l~v~~~~~~~~~~~~~~~ 110 (176)
-++|+-...++++..+.+.+.|..++++...+......+.|.
T Consensus 111 ~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~ 152 (160)
T 3sao_A 111 MRLYSRSREVSPTAMAIFRKLARERNYTDEMVAVLPSQAACS 152 (160)
T ss_dssp EEEEESSSSCCHHHHHHHHHHHHTTTCCGGGEEECCCCSSCC
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccC
Confidence 357777788899999999999999999885544444444443
Done!