Your job contains 1 sequence.
>psy16234
MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE
TKLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRF
LHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILID
AVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACS
SVINHKFDPKMPSKSPEYLAKYCDMLLKKSSKGLSESEMDDKLSQSITVFKYIDDKDVFH
KFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHS
EFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKL
SWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRH
IASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED
RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN
STDEYSYVA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16234
(609 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 1615 5.9e-187 2
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 1493 4.5e-178 2
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 1492 5.7e-178 2
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 1490 9.2e-178 2
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 1491 2.4e-177 2
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 1481 2.4e-177 2
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 1030 8.3e-171 3
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 1177 1.6e-159 3
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 1498 1.3e-153 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 1490 9.5e-153 1
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 1190 4.7e-146 2
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 1393 1.8e-142 1
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 1127 1.2e-136 2
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 1010 5.9e-118 2
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 1010 5.9e-118 2
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 1062 7.9e-112 2
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 1062 7.9e-112 2
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 1062 7.9e-112 2
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 1062 7.9e-112 2
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 1062 7.9e-112 2
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 1057 2.7e-111 2
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 1057 2.7e-111 2
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 1051 1.1e-110 2
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 1045 4.9e-110 2
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 1018 1.0e-109 3
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 1029 1.2e-108 2
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 1029 4.0e-106 2
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 957 2.9e-99 2
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 954 5.9e-96 1
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 806 3.4e-90 2
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 858 8.9e-86 1
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 785 4.8e-78 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 543 5.2e-75 2
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 705 2.0e-73 2
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 738 4.6e-73 1
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 700 1.1e-72 2
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 696 1.1e-72 2
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 696 1.8e-72 2
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 696 1.8e-72 2
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 690 1.8e-72 2
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 696 2.3e-72 2
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 731 2.5e-72 1
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 726 8.6e-72 1
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 673 1.6e-69 2
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 680 2.0e-69 2
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 660 4.7e-68 2
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 673 3.6e-66 1
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 658 1.4e-64 1
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 658 1.4e-64 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 657 1.8e-64 1
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 655 2.9e-64 1
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 654 3.7e-64 1
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 430 9.9e-64 2
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 430 5.1e-63 2
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 431 7.9e-63 2
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 430 1.3e-62 2
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 637 2.3e-62 1
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 427 2.8e-62 2
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 426 4.1e-62 2
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 426 5.0e-62 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 430 5.6e-62 2
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 426 6.4e-62 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 426 1.0e-61 2
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 423 2.0e-61 2
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 626 3.4e-61 1
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 598 4.2e-61 2
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 598 4.2e-61 2
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 419 6.6e-61 2
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 342 4.0e-59 3
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 378 5.9e-57 2
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 551 4.9e-56 2
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 372 9.3e-55 3
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 372 9.3e-55 3
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 549 4.9e-53 1
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 331 2.2e-52 3
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 534 1.9e-51 1
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 431 2.9e-51 3
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 517 1.2e-49 1
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 279 8.0e-49 4
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 249 7.0e-48 3
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 487 1.8e-46 1
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 478 1.1e-44 1
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 450 1.5e-43 2
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 465 2.0e-43 1
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 294 3.8e-41 3
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 294 3.8e-41 3
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 293 3.8e-41 3
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 293 7.9e-41 3
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 293 7.9e-41 3
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 388 3.5e-40 2
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 290 3.5e-40 3
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 293 1.9e-39 3
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 293 1.9e-39 3
UNIPROTKB|F1P9Q4 - symbol:CUL5 "Uncharacterized protein" ... 289 2.3e-39 4
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 288 7.1e-39 4
SGD|S000003235 - symbol:CUL3 "Ubiquitin-protein ligase" s... 405 2.6e-35 1
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 373 6.1e-34 1
UNIPROTKB|F1SR60 - symbol:F1SR60 "Uncharacterized protein... 265 7.5e-31 3
UNIPROTKB|F1RUC1 - symbol:CUL4B "Uncharacterized protein"... 324 1.9e-27 2
CGD|CAL0005748 - symbol:orf19.7497 species:5476 "Candida ... 199 1.7e-24 3
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 1615 (573.6 bits), Expect = 5.9e-187, Sum P(2) = 5.9e-187
Identities = 306/543 (56%), Positives = 404/543 (74%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
LY ++FE LE SG +Y EA+KLL C+VS+YM+ V+++L E+ R+ +FLHVSS PK
Sbjct: 214 LYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVSSLPK 273
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINI-LIDAVRDHIC 187
++ +CE+ + D L F+ EC MV+EERR DL NMY +L+ + + + LI DHI
Sbjct: 274 LRKECEEKFINDRLGFIYSECREMVSEERRQDLRNMYVVLKPIPDNLKSELITTFLDHIK 333
Query: 188 KQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKF 247
+GL+ +S L G+NI FVENML VH KY+ + ++F D F+ ALDKAC+SVIN +
Sbjct: 334 SEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDKACASVINRRP 393
Query: 248 DPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKML 307
+ P +S EY+AKYCD E+E+D KL+ +IT+FKYI+DKDV+ KFY+++L
Sbjct: 394 TERQPCRSAEYVAKYCD--TLLKKSKTCEAEIDQKLTNNITIFKYIEDKDVYQKFYSRLL 451
Query: 308 AKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE 367
AKRLIH+QS SMD EE MIN+LKQACGYEFTNK HRM TDI +S LN KF++ +K +
Sbjct: 452 AKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMFTDISVSVDLNNKFNTH-LKDSN 510
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
+DLGI+ +I +LQAG+WPLG T + F+VPQE EK I MFE +YH F+GRKL+WLH++
Sbjct: 511 VDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFEDYYHKLFSGRKLTWLHHMC 570
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
ELKLS+LK+ Y VTMQT+QMAI+LLFE D+++C +IQ L L+ + +H+ ++E
Sbjct: 571 HGELKLSHLKKSYIVTMQTYQMAIILLFETCDSLSCREIQNTLQLNDETFQKHMQPIIES 630
Query: 488 KLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQA 547
KLL ++ E L +T I LNL Y NKRTK KIS A+QKETPQE+E T++SVDEDRKL+LQA
Sbjct: 631 KLLNASSENLAGETRIELNLDYTNKRTKFKISSALQKETPQEVEHTINSVDEDRKLFLQA 690
Query: 548 AIVRIMKSRKQIRHNALIQEVLSQSK-SFAPSISMIKKCIESLIDKNYVERTANSTDEYS 606
AIVRIMK+RK ++HNALIQEVLS SK SF P+I+MIKKC+ESLIDK Y+ERTANS DEYS
Sbjct: 691 AIVRIMKARKVLKHNALIQEVLSLSKVSFTPNIAMIKKCVESLIDKQYIERTANSGDEYS 750
Query: 607 YVA 609
Y+A
Sbjct: 751 YMA 753
Score = 220 (82.5 bits), Expect = 5.9e-187, Sum P(2) = 5.9e-187
Identities = 52/115 (45%), Positives = 71/115 (61%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKPK V+F W L+ + VITL V R+ WN FSD+Y+LCVA PEP+ADRLY E
Sbjct: 1 MSLKPKIVEFVDVWPRLRCIAESVITLTKVERSVWNTSFSDVYTLCVAQPEPMADRLYGE 60
Query: 61 TKLFLDQHLYVDIFETQFLEMSGEWYKSEASK-LLQTCNVSQYME--RVLQVLHE 112
TK FL+QH+ + + +E GE S LLQ ++ +ME + ++ LH+
Sbjct: 61 TKHFLEQHVQEMLAKKVLIE--GECSHSNGGPDLLQRYYIT-WMEYSQGIKYLHQ 112
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 1493 (530.6 bits), Expect = 4.5e-178, Sum P(2) = 4.5e-178
Identities = 293/545 (53%), Positives = 399/545 (73%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y +IFE+ FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ +E+++D+ANMY LLR+V G+ +I +++HI +
Sbjct: 263 IHECQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIQDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +N+ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 323 GLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 381
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++DKL+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+K +
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTV 500
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 561 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 620
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYL 545
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YL
Sbjct: 621 KMINHDSEKEDIDTESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYL 680
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDE 604
QAAIVRIMK+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DE
Sbjct: 681 QAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADE 740
Query: 605 YSYVA 609
YSYVA
Sbjct: 741 YSYVA 745
Score = 258 (95.9 bits), Expect = 4.5e-178, Sum P(2) = 4.5e-178
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLHKRVLESEEQVLVMYHRYWE-EYSK 96
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 1492 (530.3 bits), Expect = 5.7e-178, Sum P(2) = 5.7e-178
Identities = 293/545 (53%), Positives = 399/545 (73%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y +IFE+ FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ +E+++D+ANMY LLR+V G+ +I +++HI +
Sbjct: 263 IHECQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +N+ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 323 GLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 381
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++DKL+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+K +
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTV 500
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 561 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 620
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYL 545
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YL
Sbjct: 621 KMINHDSEKEDIDVESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYL 680
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDE 604
QAAIVRIMK+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DE
Sbjct: 681 QAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADE 740
Query: 605 YSYVA 609
YSYVA
Sbjct: 741 YSYVA 745
Score = 258 (95.9 bits), Expect = 5.7e-178, Sum P(2) = 5.7e-178
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWSKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLHKRVLESEEQVLVMYHRYWE-EYSK 96
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 1490 (529.6 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 292/545 (53%), Positives = 399/545 (73%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y +IFE+ FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ +E+++D+ANMY LLR+V G+ +I +++HI +
Sbjct: 263 IHECQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +N+ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 323 GLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 381
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++D+L+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+K +
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTV 500
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 561 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 620
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYL 545
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YL
Sbjct: 621 KMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYL 680
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDE 604
QAAIVRIMK+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DE
Sbjct: 681 QAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADE 740
Query: 605 YSYVA 609
YSYVA
Sbjct: 741 YSYVA 745
Score = 258 (95.9 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLHKRVLESEEQVLVMYHRYWE-EYSK 96
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 1491 (529.9 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 303/602 (50%), Positives = 419/602 (69%)
Query: 14 WGSLQ-ETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLYVD 72
W L E +Q ++ +G + + NDR + + V + + ++ K Y +
Sbjct: 166 WRKLMIEPLQPML-IGKLLKEIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQE 224
Query: 73 IFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKVKAK 132
IFE FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV +
Sbjct: 225 IFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHPSSYSKVIHE 284
Query: 133 CEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQGLE 192
C+Q MVADHL FL GEC ++ +E+R D+ANMY LLR+V G+ +I ++ HI +G+
Sbjct: 285 CQQRMVADHLQFLHGECQNIIRQEKRDDMANMYTLLRAVSSGLPHMIQELQVHIHDEGIR 344
Query: 193 AISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDPKMP 252
A LS +N+ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +PK
Sbjct: 345 ATINLSQENMPTLFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EPKSI 403
Query: 253 SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLI 312
K+PE LAKYCD E+E++DKL+ ITVFKYIDDKDVF K YA+MLAKRLI
Sbjct: 404 CKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKIYARMLAKRLI 463
Query: 313 HQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE--IDL 370
H S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+KT E +DL
Sbjct: 464 HGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSTDLNNKFNN-FIKTQETVVDL 522
Query: 371 GIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVE 430
GI F I +LQAG+WPL S+F++PQELEK + MFE FY+ F+GRKL+WLH + E
Sbjct: 523 GISFQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTWLHYLCTGE 582
Query: 431 LKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECKLL 490
+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++ K++
Sbjct: 583 VKMNYLSKPYVAVVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELQKTIKSLLDVKMI 642
Query: 491 TSN--KEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+ + KEE+ ++ L + + +KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YLQAA
Sbjct: 643 SHDLQKEEIEPESTFSLIMSFTSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAA 702
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMK+RK +RHNALIQEV++QSK+ F PSISMIKKCIE LIDK Y+ER+ +S DEYSY
Sbjct: 703 IVRIMKARKVLRHNALIQEVINQSKARFNPSISMIKKCIEVLIDKQYIERSQSSADEYSY 762
Query: 608 VA 609
VA
Sbjct: 763 VA 764
Score = 253 (94.1 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 45/69 (65%), Positives = 56/69 (81%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL ++LY E
Sbjct: 20 MSLKPRVVDFDETWNKLLTTIRAVVMLDYVERATWNDRFSDIYALCVAYPEPLGEKLYTE 79
Query: 61 TKLFLDQHL 69
TK+FL+ H+
Sbjct: 80 TKVFLENHV 88
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 1481 (526.4 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 291/545 (53%), Positives = 397/545 (72%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y IF + FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ +ER++D+ANMY LLR+V G+ +I+ ++ HI +
Sbjct: 263 IHECQQRMVADHLQFLHSECHSIIQQERKNDMANMYVLLRAVSSGLPHMIEELQKHIHDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +++ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 323 GLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 381
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++DKL+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F++ +
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIRNQDTV 500
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 561 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 620
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYL 545
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YL
Sbjct: 621 KMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYL 680
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDE 604
QAAIVRIMK+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DE
Sbjct: 681 QAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADE 740
Query: 605 YSYVA 609
YSYVA
Sbjct: 741 YSYVA 745
Score = 263 (97.6 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 55/97 (56%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HLY + E+ Q L M +++ E SK
Sbjct: 61 TKIFLESHVRHLYKRVLESEEQVLVMYHRYWE-EYSK 96
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 1030 (367.6 bits), Expect = 8.3e-171, Sum P(3) = 8.3e-171
Identities = 200/356 (56%), Positives = 268/356 (75%)
Query: 259 LAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTS 318
LAKYCD E+E++DKL+ ITVFKYIDDKDVF KFYA+MLAKRLIH S S
Sbjct: 371 LAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMS 430
Query: 319 MDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE--IDLGIHFSI 376
MD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F++ + IDLGI F I
Sbjct: 431 MDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIRNQDTVIDLGISFQI 489
Query: 377 NILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYL 436
+LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH + E+K++YL
Sbjct: 490 YVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYL 549
Query: 437 KRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLT--SNK 494
+PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++ K++ S K
Sbjct: 550 GKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVKMINHDSEK 609
Query: 495 EELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMK 554
E++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YLQAAIVRIMK
Sbjct: 610 EDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMK 669
Query: 555 SRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DEYSYVA
Sbjct: 670 ARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 725
Score = 405 (147.6 bits), Expect = 8.3e-171, Sum P(3) = 8.3e-171
Identities = 82/168 (48%), Positives = 113/168 (67%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y IF + FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ ER++D+ANMY LLR+V G+ +I+ ++ HI +
Sbjct: 263 IHECQQRMVADHLQFLHSECHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDK 237
GL A S L+ +++ T FVE++L VH K+ + + +GDQ FM ALDK
Sbjct: 323 GLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDK 370
Score = 263 (97.6 bits), Expect = 8.3e-171, Sum P(3) = 8.3e-171
Identities = 55/97 (56%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HLY + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLYKRVLESEEQVLVMYHRYWE-EYSK 96
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 1177 (419.4 bits), Expect = 1.6e-159, Sum P(3) = 1.6e-159
Identities = 230/468 (49%), Positives = 326/468 (69%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y IF + FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ ER++D+ANMY LLR+V G+ +I+ ++ HI +
Sbjct: 263 IHECQQRMVADHLQFLHSECHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +++ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 323 GLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 381
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++DKL+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F++ +
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIRNQDTV 500
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 561 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 620
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERT 533
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQ I ++
Sbjct: 621 KMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQVISQS 668
Score = 263 (97.6 bits), Expect = 1.6e-159, Sum P(3) = 1.6e-159
Identities = 55/97 (56%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYAE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HLY + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLYKRVLESEEQVLVMYHRYWE-EYSK 96
Score = 151 (58.2 bits), Expect = 1.6e-159, Sum P(3) = 1.6e-159
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 567 EVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+V+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DEYSYVA
Sbjct: 663 QVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 706
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 1498 (532.4 bits), Expect = 1.3e-153, P = 1.3e-153
Identities = 307/604 (50%), Positives = 422/604 (69%)
Query: 14 WGSLQ-ETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLYVD 72
W L E +Q ++ + + R NDR + + V + + ++ K L Y +
Sbjct: 147 WRKLMIEPLQAIL-IRMLLREIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQE 205
Query: 73 IFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKVKAK 132
IFE FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV +
Sbjct: 206 IFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHE 265
Query: 133 CEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQGLE 192
C+Q MVADHL FL EC ++ +E+R+D+ANMY LLR+V G+ +I +++HI +GL
Sbjct: 266 CQQRMVADHLQFLHAECHNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGLR 325
Query: 193 AISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDPKMP 252
A S LS +N+ TQFVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +PK
Sbjct: 326 ATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EPKSI 384
Query: 253 SKSPEYL--AKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
K+PE L AKYCD E+E++DKL+ ITVFKYIDDKDVF KFYA+MLAKR
Sbjct: 385 CKAPELLELAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKR 444
Query: 311 LIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE--I 368
LIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+K + I
Sbjct: 445 LIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTII 503
Query: 369 DLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
DLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 504 DLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCT 563
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECK 488
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++ K
Sbjct: 564 GEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVK 623
Query: 489 LLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQ 546
++ S+KE++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YLQ
Sbjct: 624 MINHDSDKEDVEAESTFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQ 683
Query: 547 AAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEY 605
AAIVRIMK+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DEY
Sbjct: 684 AAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEY 743
Query: 606 SYVA 609
SYVA
Sbjct: 744 SYVA 747
Score = 232 (86.7 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 50/96 (52%), Positives = 65/96 (67%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEP+ Y E
Sbjct: 2 MSLKPRVVDFDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPEPVRREPYTE 61
Query: 61 TKLFLDQ--HLYVDIFET--QFLEMSGEWYKSEASK 92
TK+F + HL+ + E+ Q L M +++ E SK
Sbjct: 62 TKIFENHVHHLHKRVLESEEQVLVMYHRYWE-EYSK 96
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
Identities = 292/545 (53%), Positives = 399/545 (73%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y +IFE+ FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 146 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 205
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ +E+++D+ANMY LLR+V G+ +I +++HI +
Sbjct: 206 IHECQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDE 265
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +N+ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 266 GLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 324
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++D+L+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 325 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAK 384
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+K +
Sbjct: 385 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTV 443
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 444 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 503
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 504 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 563
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYL 545
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQE+E+T S+VDEDRK+YL
Sbjct: 564 KMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYL 623
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDE 604
QAAIVRIMK+RK +RHNALIQEV+SQS++ F PSISMIKKCIE LIDK Y+ER+ S DE
Sbjct: 624 QAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADE 683
Query: 605 YSYVA 609
YSYVA
Sbjct: 684 YSYVA 688
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 1190 (424.0 bits), Expect = 4.7e-146, Sum P(2) = 4.7e-146
Identities = 231/468 (49%), Positives = 329/468 (70%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y +IFE+ FL +GE+YK EAS LLQ N SQYME+VL L +E R ++LH SSY KV
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
+C+Q MVADHL FL EC ++ +E+++D+ANMY LLR+V G+ +I +++HI +
Sbjct: 263 IHECQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDE 322
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GL A S L+ +N+ T FVE++L VH K+ + + +GDQ FM ALDKA +SV+N++ +P
Sbjct: 323 GLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYR-EP 381
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
K K+PE LAKYCD E+E++D+L+ ITVFKYIDDKDVF KFYA+MLAK
Sbjct: 382 KSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAK 441
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-- 367
RLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF++ F+K +
Sbjct: 442 RLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNN-FIKNQDTV 500
Query: 368 IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNIS 427
IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+GRKL+WLH +
Sbjct: 501 IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLC 560
Query: 428 QVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC 487
E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ ++ + I SL++
Sbjct: 561 TGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDV 620
Query: 488 KLLT--SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERT 533
K++ S KE++ ++ LN+ +++KRTK KI+ ++QK+TPQ I ++
Sbjct: 621 KMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQVISQS 668
Score = 258 (95.9 bits), Expect = 4.7e-146, Sum P(2) = 4.7e-146
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLHKRVLESEEQVLVMYHRYWE-EYSK 96
Score = 152 (58.6 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 45/127 (35%), Positives = 63/127 (49%)
Query: 489 LLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQ-KETPQEIERTVSSVDEDRKLYLQA 547
LL N E E++ + N K I + K + E+ +D + L
Sbjct: 585 LLAFNNSETVSYKELQDSTQMNEKELTKTIKSLLDVKMINHDSEK--EDIDAESSFSLN- 641
Query: 548 AIVRIMKSRKQIRHNALIQ----EVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANST 602
+ R + + +Q +V+SQS++ F PSISMIKKCIE LIDK Y+ER+ S
Sbjct: 642 --MNFSSKRTKFKITTSMQKDTPQVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASA 699
Query: 603 DEYSYVA 609
DEYSYVA
Sbjct: 700 DEYSYVA 706
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 1393 (495.4 bits), Expect = 1.8e-142, P = 1.8e-142
Identities = 273/512 (53%), Positives = 375/512 (73%)
Query: 103 MERVLQVLHEETNRSVRFLHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLA 162
ME+VL L +E R ++LH SSY KV +C+Q MVADHL FL EC ++ +E+++D+A
Sbjct: 1 MEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHAECHNIIRQEKKNDMA 60
Query: 163 NMYPLLRSVREGINILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVK 222
NMY LLR+V G+ +I +++HI +GL A S L+ +N+ T FVE++L VH K+ +
Sbjct: 61 NMYVLLRAVSTGLPHMIQELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLIN 120
Query: 223 ELFSGDQSFMGALDKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDK 282
+ +GDQ FM ALDKA +SV+N++ +PK K+PE LAKYCD E+E++DK
Sbjct: 121 TVLNGDQHFMSALDKALTSVVNYR-EPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDK 179
Query: 283 LSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFH 342
L+ ITVFKYIDDKDVF KFYA+MLAKRLIH S SMD EEAMINKLKQACGYEFT+K H
Sbjct: 180 LTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLH 239
Query: 343 RMLTDIKISGGLNEKFHSEFVKTNE--IDLGIHFSINILQAGSWPLGPTVISSFSVPQEL 400
RM TD+ +S LN KF++ F+K + IDLGI F I +LQAG+WPL S+F++PQEL
Sbjct: 240 RMYTDMSVSADLNNKFNN-FIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQEL 298
Query: 401 EKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDA 460
EK + MFE FY F+GRKL+WLH + E+K++YL +PY + T+QMA+LL F ++
Sbjct: 299 EKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSET 358
Query: 461 MTCGDIQTVLSLSQDQIGRHIASLVECKLLT--SNKEELTEDTEIRLNLGYNNKRTKLKI 518
++ ++Q +++ ++ + I SL++ K++ S KE++ ++ LN+ +++KRTK KI
Sbjct: 359 VSYKELQDSTQMNEKELTKTIKSLLDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKI 418
Query: 519 SGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAP 577
+ ++QK+TPQE+E+T S+VDEDRK+YLQAAIVRIMK+RK +RHNALIQEV+SQS++ F P
Sbjct: 419 TTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNP 478
Query: 578 SISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
SISMIKKCIE LIDK Y+ER+ S DEYSYVA
Sbjct: 479 SISMIKKCIEVLIDKQYIERSQASADEYSYVA 510
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 1127 (401.8 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 221/449 (49%), Positives = 311/449 (69%)
Query: 59 QETKLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSV 118
++ K L Y +IFE FL +GE+YK EAS LLQ N SQYME+VL L +E R
Sbjct: 220 EQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCR 279
Query: 119 RFLHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINIL 178
++LH SSY KV +C+Q MVADHL FL EC ++ +E+R+D+ANMY LLR+V G+ +
Sbjct: 280 KYLHPSSYGKVIHECQQRMVADHLQFLHAECHNIIRQEKRNDMANMYTLLRAVSSGLPHM 339
Query: 179 IDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKA 238
I +++HI +GL A S LS +N+ TQFVE++L VH K+ + + +GDQ FM ALDKA
Sbjct: 340 IQELQNHIHDEGLRATSNLSQENMPTQFVESVLEVHSKFVQLINTVLNGDQHFMSALDKA 399
Query: 239 CSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDV 298
+SV+N++ +PK K+PE LAKYCD E+E++DKL+ ITVFKYIDDKDV
Sbjct: 400 LTSVVNYR-EPKSICKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFITVFKYIDDKDV 458
Query: 299 FHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKF 358
F KFYA+MLAKRLIH S SMD EEAMINKLKQACGYEFT+K HRM TD+ +S LN KF
Sbjct: 459 FQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKF 518
Query: 359 HSEFVKTNE--IDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFN 416
++ F+K + IDLGI F I +LQAG+WPL S+F++PQELEK + MFE FY F+
Sbjct: 519 NN-FIKNQDTIIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFS 577
Query: 417 GRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQ 476
GRKL+WLH + E+K++YL +PY + T+QMA+LL F ++ ++ ++Q +++ +
Sbjct: 578 GRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKE 637
Query: 477 IGRHIASLVECKLLTSNKEELTEDTEIRL 505
+ + I SL++ K++ + +++ + +I++
Sbjct: 638 LTKTIKSLLDVKMINHDSDKVCSN-DIKM 665
Score = 232 (86.7 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 50/96 (52%), Positives = 65/96 (67%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEP+ Y E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPEPVRREPYTE 60
Query: 61 TKLFLDQ--HLYVDIFET--QFLEMSGEWYKSEASK 92
TK+F + HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFENHVHHLHKRVLESEEQVLVMYHRYWE-EYSK 95
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 1010 (360.6 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 218/560 (38%), Positives = 334/560 (59%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y + FE L + ++Y + A K+L + S+YME+V+ +L +E R+ ++LH SS KV
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
C++ M+ H + L C ++ E DL NMY LL+ ++ G+++++ +++ K+
Sbjct: 355 ITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKK 414
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GLEA+S L+G+N+ QFVEN+L V+ K+ +F D F LDKA V+N K
Sbjct: 415 GLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPG 474
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
+ K+ E LA+Y D E++++ KL +I +F+YI+DKD+F KFY+KMLA
Sbjct: 475 QSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLAN 534
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKF--HSEFVKTNE 367
RLI S SMD EE MINKLKQACGYEFT+K RM TDI +S L+ F H +KT +
Sbjct: 535 RLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQ 594
Query: 368 IDLG-IHFSINILQAGSWPLG-PTV-----------ISSFSVPQELEKCIHMFEKFYHGQ 414
D+ + ILQAGSWPL P + +++F +P+ L+ I FEKFY G+
Sbjct: 595 PDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQEFEKFYTGK 654
Query: 415 FNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQ 474
NGRKL+WL N+SQ +++L+YL + Y M +QMA LL FE+ DA+ DI + +S
Sbjct: 655 HNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSG 714
Query: 475 DQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGA-VQKETPQEIERT 533
D + + I ++++ LLT + + LT D+ +RLN+ +KR K ++ V K +E E
Sbjct: 715 DYLLKTIRTILDVTLLTCDDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAV 774
Query: 534 VSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKN 593
++V +DRK Y++ AIVRIMK+RK ++HNAL+ E++ Q+K S I+ I+ +
Sbjct: 775 ANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKG---RFSPDVPFIKKSIE-D 830
Query: 594 YVERT----ANSTDEYSYVA 609
+E+ + DEY Y+A
Sbjct: 831 LIEKMYIQRTDQNDEYQYLA 850
Score = 172 (65.6 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 2 SLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
SLKPK V+F+K W L+ +I +I L + W+ +FSD+Y +CV+ P PL++RLY E
Sbjct: 79 SLKPKVVEFDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEV 138
Query: 62 KLFLDQHL 69
K + +H+
Sbjct: 139 KACIQEHV 146
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 1010 (360.6 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 218/560 (38%), Positives = 334/560 (59%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y + FE L + ++Y + A K+L + S+YME+V+ +L +E R+ ++LH SS KV
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
C++ M+ H + L C ++ E DL NMY LL+ ++ G+++++ +++ K+
Sbjct: 355 ITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKK 414
Query: 190 GLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDP 249
GLEA+S L+G+N+ QFVEN+L V+ K+ +F D F LDKA V+N K
Sbjct: 415 GLEAVSRLTGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPG 474
Query: 250 KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAK 309
+ K+ E LA+Y D E++++ KL +I +F+YI+DKD+F KFY+KMLA
Sbjct: 475 QSVPKASERLARYTDGLLKKSTKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLAN 534
Query: 310 RLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKF--HSEFVKTNE 367
RLI S SMD EE MINKLKQACGYEFT+K RM TDI +S L+ F H +KT +
Sbjct: 535 RLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQ 594
Query: 368 IDLG-IHFSINILQAGSWPLG-PTV-----------ISSFSVPQELEKCIHMFEKFYHGQ 414
D+ + ILQAGSWPL P + +++F +P+ L+ I FEKFY G+
Sbjct: 595 PDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQEFEKFYTGK 654
Query: 415 FNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQ 474
NGRKL+WL N+SQ +++L+YL + Y M +QMA LL FE+ DA+ DI + +S
Sbjct: 655 HNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSG 714
Query: 475 DQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGA-VQKETPQEIERT 533
D + + I ++++ LLT + + LT D+ +RLN+ +KR K ++ V K +E E
Sbjct: 715 DYLLKTIRTILDVTLLTCDDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAV 774
Query: 534 VSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKN 593
++V +DRK Y++ AIVRIMK+RK ++HNAL+ E++ Q+K S I+ I+ +
Sbjct: 775 ANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKG---RFSPDVPFIKKSIE-D 830
Query: 594 YVERT----ANSTDEYSYVA 609
+E+ + DEY Y+A
Sbjct: 831 LIEKMYIQRTDQNDEYQYLA 850
Score = 172 (65.6 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 2 SLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
SLKPK V+F+K W L+ +I +I L + W+ +FSD+Y +CV+ P PL++RLY E
Sbjct: 79 SLKPKVVEFDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEV 138
Query: 62 KLFLDQHL 69
K + +H+
Sbjct: 139 KACIQEHV 146
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 1062 (378.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 232/554 (41%), Positives = 328/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 228 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 287
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 288 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 347
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 348 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 407
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 408 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 467
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 468 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 527
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 528 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 583
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA T + + D + + +
Sbjct: 584 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQI 643
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 644 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 703
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 704 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 763
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 764 ERVDGEKDTYSYLA 777
Score = 62 (26.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 1062 (378.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 232/554 (41%), Positives = 328/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 526
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 527 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 582
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA T + + D + + +
Sbjct: 583 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQI 642
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 643 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 762
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 763 ERVDGEKDTYSYLA 776
Score = 62 (26.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 1062 (378.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 232/554 (41%), Positives = 328/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 526
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 527 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 582
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA T + + D + + +
Sbjct: 583 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQI 642
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 643 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 762
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 763 ERVDGEKDTYSYLA 776
Score = 62 (26.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 1062 (378.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 232/554 (41%), Positives = 328/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 526
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 527 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 582
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA T + + D + + +
Sbjct: 583 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQI 642
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 643 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 762
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 763 ERVDGEKDTYSYLA 776
Score = 62 (26.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 1062 (378.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 232/554 (41%), Positives = 328/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 526
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 527 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 582
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA T + + D + + +
Sbjct: 583 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQI 642
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 643 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 762
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 763 ERVDGEKDTYSYLA 776
Score = 62 (26.9 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 1057 (377.1 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 231/554 (41%), Positives = 327/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 526
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 527 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 582
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA + + D + + +
Sbjct: 583 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQI 642
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 643 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 762
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 763 ERVDGEKDTYSYLA 776
Score = 62 (26.9 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 1057 (377.1 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 231/554 (41%), Positives = 327/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 526
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 527 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 582
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ +S+ EL + K Y + TFQMAILL + DA + + D + + +
Sbjct: 583 YQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQI 642
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 643 LLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYL 762
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 763 ERVDGEKDTYSYLA 776
Score = 62 (26.9 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 1051 (375.0 bits), Expect = 1.1e-110, Sum P(2) = 1.1e-110
Identities = 231/554 (41%), Positives = 325/554 (58%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FETQFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 228 VYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 287
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ + +G+ L + HI
Sbjct: 288 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYN 347
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G S N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 348 QGLAAIEKCGESALNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 407
Query: 247 FDPKM---PSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 408 AVTKMVQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 467
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
AKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 468 AKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLT 527
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+WL
Sbjct: 528 NSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTWL 583
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+++S+ EL + K Y + TFQMAILL + D T + + D + + +
Sbjct: 584 YHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDVYTVQQLTDSTQIKIDILVQVLQI 643
Query: 484 LVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
L++ KLL E E DT I+L LGY NK+ ++ I+ ++ E QE E T +
Sbjct: 644 LLKSKLLVLEDENANVDEVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKN 703
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYV 595
++EDRKL +QAAIVR MK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y+
Sbjct: 704 IEEDRKLLIQAAIVRTMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYL 763
Query: 596 ERTANSTDEYSYVA 609
ER D YSY+A
Sbjct: 764 ERVDGEKDTYSYLA 777
Score = 62 (26.9 bits), Expect = 1.1e-110, Sum P(2) = 1.1e-110
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 1045 (372.9 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 230/555 (41%), Positives = 326/555 (58%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 227 VYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 286
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ +++G+ L + HI
Sbjct: 287 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHN 346
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
QGL AI G + N +V+ +L VHKKY A V F+ D F+ ALDKAC IN+
Sbjct: 347 QGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNN 406
Query: 247 FDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
KM SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KFY
Sbjct: 407 AVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466
Query: 304 AKMLAKRLIHQQSTSMDGEEAMI-NKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEF 362
AKMLAK L+HQ S S D E +MI NKLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 467 AKMLAK-LVHQNSASDDAEASMISNKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHL 525
Query: 363 VKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSW 422
+ +D + FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+W
Sbjct: 526 TNSEPLDSPVDFSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYASRHSGRKLTW 583
Query: 423 LHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIA 482
L+ +S+ EL + K Y + TFQMAILL + DA + + D + + +
Sbjct: 584 LYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQVLQ 643
Query: 483 SLVECKLLTSNKE-------ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVS 535
L++ KLL E EL DT I+L LGY NK+ ++ I+ ++ E QE E T
Sbjct: 644 ILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHK 703
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNY 594
+++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y
Sbjct: 704 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEY 763
Query: 595 VERTANSTDEYSYVA 609
+ER D YSY+A
Sbjct: 764 LERVDGEKDTYSYLA 778
Score = 62 (26.9 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ ++ W L+ IQ V T ++ ++ + + ++ +Y+ C +
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTS 55
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 1018 (363.4 bits), Expect = 1.0e-109, Sum P(3) = 1.0e-109
Identities = 217/554 (39%), Positives = 329/554 (59%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y FE FL + +Y +E++K + +V+ YM++V L+EE R ++LH ++ +
Sbjct: 218 VYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESE 277
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ AKCE+ ++ H+ + E ++ +++ DL MY LL + G+ L + H+
Sbjct: 278 LIAKCEKVLIEKHVEVIWNEFQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQN 337
Query: 189 QGLEAISGLSGDNISTQ--FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
GL+A+S ++ + + ++E +L V KKY V F D F+ +LDKAC IN
Sbjct: 338 VGLQAVSSIATNGVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINEN 397
Query: 247 ---FDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
K SKSPE LA++ D ESEM+ L+ + VFKYI+DKDVF FY
Sbjct: 398 AVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESEMEQLLNDVMIVFKYIEDKDVFQDFY 457
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
+KMLAKRLIH STS D E MI KLK CGYE+T+K RM TD+ +S L ++F++
Sbjct: 458 SKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHIE 517
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ L I FS+ +L GSWPL P ++FS+P+EL+ C +F+KFY Q +GRKL+WL
Sbjct: 518 QVERSSLNIDFSVLVLATGSWPLQPPS-TNFSIPKELQACEQLFQKFYQNQHSGRKLNWL 576
Query: 424 HNISQVELKLSYL---KRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRH 480
H++S+ ELK YL K Y + T+Q+ +LL F + + +T +IQ L +
Sbjct: 577 HHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGT 636
Query: 481 IASLVECKLLTSNK----EELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
+ SL + K+L ++ EE+ + T+ LN + NK+TK+ I+ V + +EI+ +
Sbjct: 637 LTSLAKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKT 696
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYV 595
V+EDRKL +QAAIVRIMK RKQ+ H+ L+ EV+SQ ++ F P +++IKKCI+ LI+K Y+
Sbjct: 697 VEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYL 756
Query: 596 ERTANSTDEYSYVA 609
R D YSYVA
Sbjct: 757 MRVEGKKDHYSYVA 770
Score = 52 (23.4 bits), Expect = 1.0e-109, Sum P(3) = 1.0e-109
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 53 LADRLYQETKLFLDQHL--YVDIFETQFLEMSGEWYKSE----ASKLLQTCNVSQYMER 105
+ + LY LFL +H+ + + ET+ E +Y +E S + N+ QYM R
Sbjct: 77 VGEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNIFQYMNR 135
Score = 48 (22.0 bits), Expect = 1.0e-109, Sum P(3) = 1.0e-109
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGN--VRRATWNDRFSDIYSLCVA 48
+ V + W L+E I +IT N + W ++ +Y C A
Sbjct: 11 RSVKLDDIWPELEEGIYKIITDLNKGFPKQKWIALYTHVYDYCAA 55
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 1029 (367.3 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 229/555 (41%), Positives = 327/555 (58%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE QFL + +Y E+++ LQ V++YM++ L EE R +LH S+ +
Sbjct: 225 VYKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDE 284
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ KCEQ ++ HL E ++ ++ DL MY L+ + +G+ L + HI
Sbjct: 285 LARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHN 344
Query: 189 QGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDK-ACSSVINH 245
QGL AI G S N +V+ L VHKKY A V F+ D F+ ALDK AC IN+
Sbjct: 345 QGLAAIEKCGDSALNDPKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKVACGRFINN 404
Query: 246 KFDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKF 302
+M SKSPE LA+YCD E+E++D L+Q + VFKYI+DKDVF KF
Sbjct: 405 NAVTRMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKF 464
Query: 303 YAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEF 362
YAKMLAKRL+HQ S S D E +MI+KLKQACG+E+T+K RM DI +S LNE+F
Sbjct: 465 YAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHL 524
Query: 363 VKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSW 422
+ +DL FSI +L +GSWP + +F++P ELE+ F FY + +GRKL+W
Sbjct: 525 SNSEPLDLD--FSIQVLSSGSWPFQQSC--TFALPSELERSYQRFTAFYGSRHSGRKLTW 580
Query: 423 LHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIA 482
L+++S+ EL + K Y + TFQMAILL F + + + + D + + +
Sbjct: 581 LYHLSKGELVTNCFKNRYTLQASTFQMAILLQFNTENCYSVQQLADSTQIKTDILVQVLQ 640
Query: 483 SLVECKLLT-----SNKEELT--EDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVS 535
L++ KLL +N +E+ DT I+L LGY NK+ ++ I+ ++ E QE E T
Sbjct: 641 ILLKSKLLVLEDENANIDEMDFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHK 700
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNY 594
+++EDRKL +QAAIVRIMK RK ++H L+ EVL+Q S F P + +IKKCI+ LI+K Y
Sbjct: 701 NIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEY 760
Query: 595 VERTANSTDEYSYVA 609
+ER D YSY+A
Sbjct: 761 LERVDGEKDTYSYLA 775
Score = 65 (27.9 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA 48
KQ+ + W L+ IQ V T ++ R+ + + ++ +Y+ C +
Sbjct: 13 KQIGLEQIWDDLRSGIQQVYTRQSMARSRYMELYTHVYNYCTS 55
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 1029 (367.3 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
Identities = 229/568 (40%), Positives = 331/568 (58%)
Query: 55 DRLYQETKLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEET 114
D ++E+ + +Y + FE+QFL + +Y ++++LLQ V++YM++V +L EE
Sbjct: 207 DNQFEESPMLT---VYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEER 263
Query: 115 NRSVRFLHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREG 174
R+ +LH SS K+ KC Q +V HL E ++ + DL MY L+ ++ G
Sbjct: 264 RRARVYLHQSSKGKLARKCRQVLVEKHLEIFLTEFQNLLNANKSEDLGRMYRLIYRIKNG 323
Query: 175 INILIDAVRDHICKQGLEAIS--GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFM 232
+ + HI QGL AI G + N +VE +L +HKKY A V F F+
Sbjct: 324 LGEFKKILETHIHNQGLSAIEECGEAALNDPRMYVETVLNIHKKYNALVISAFRNHADFV 383
Query: 233 GALDKACSSVINHKFDPKMP---SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITV 289
ALDKACS IN+ KM SKSPE LA+YCD E+E++D L+ +TV
Sbjct: 384 AALDKACSGFINNNAVTKMAQSSSKSPELLAQYCDSLLKKSSKNPEEAELEDTLNHVMTV 443
Query: 290 FKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIK 349
FKY+DDKDV KFY KMLAKRL+HQ S S D E +M++KLKQACG+E+T+K RM DI
Sbjct: 444 FKYMDDKDVVQKFYTKMLAKRLVHQNSASDDAEASMVSKLKQACGFEYTSKLQRMFQDIG 503
Query: 350 ISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEK 409
+S LN +F + + +DL FSI++L G WP + + +P ELE C F
Sbjct: 504 VSKALNAQFKKHLMDSEPLDLD--FSIHVLSYGWWPFEESC--TVLLPSELEPCYRRFTA 559
Query: 410 FYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTV 469
FY ++ RKLSW + +S+ EL +Y K Y + + TFQMAILL + DA T +
Sbjct: 560 FYASCYSDRKLSWAYQLSEGELVTNYFKNNYTLRVSTFQMAILLQYNTEDAYTIQQLMDS 619
Query: 470 LSLSQDQIGRHIASLVECKLL-----TSNKEE--LTEDTEIRLNLGYNNKRTKLKISGAV 522
+ D + + + L++ KLL ++N +E L DT I+L+ GY +K+ ++ IS +
Sbjct: 620 TQIKMDIVAQVLQILLKFKLLVLEDKSANVDEVELKPDTLIKLHFGYKSKKLRVNISLPM 679
Query: 523 QKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISM 581
+ E +E E +++EDRKL +QAAIVRIMK RK ++H L+ EV +Q S F P IS+
Sbjct: 680 KIEQKREQETMYKNIEEDRKLLIQAAIVRIMKMRKVVKHQQLLGEVATQLSSVFKPQISV 739
Query: 582 IKKCIESLIDKNYVERTANSTDEYSYVA 609
IKKCI+ LI+K Y+ER + D YSY+A
Sbjct: 740 IKKCIDILIEKEYLERVGDEKDTYSYLA 767
Score = 41 (19.5 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
Identities = 14/73 (19%), Positives = 40/73 (54%)
Query: 11 NKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE-TKLFLDQHL 69
++ W +++ IQ V ++ ++ + + ++ +Y+ C+ Y P A ++ KL D+ +
Sbjct: 18 DELWDNIRAGIQQVYARQSMVKSRYIELYTLLYNHCL-YVSPQAQTQSKKGQKLREDKTV 76
Query: 70 YVDIFET--QFLE 80
++++ +FL+
Sbjct: 77 GFELYKRIKEFLK 89
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 957 (341.9 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 216/564 (38%), Positives = 334/564 (59%)
Query: 61 TKLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRF 120
TK L+ + Y F+ FLE + +Y+ E+ + + +V +YM++ L EE R +
Sbjct: 207 TKSTLEIYRYY--FQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLY 264
Query: 121 LHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILID 180
L+ + + C +V H L+ E P++ ER+ DLA MY LL +++G++ L
Sbjct: 265 LNNDISKDLTSTCLDVLVTAHSELLRDEFQPLLDNERQDDLARMYRLLSRIKDGLDPLRT 324
Query: 181 AVRDHICKQGLEAISGLS--GDNISTQ-FVENMLAVHKKYKAFVKELFSGDQSFMGALDK 237
H+ + GL A+ ++ GD+ + +V+ +L+VH +Y + VKE F+G+ F+ +LD
Sbjct: 325 KFEAHVRRAGLSAVEKVAAEGDSFEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDN 384
Query: 238 ACSSVIN-HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDK 296
AC +N +K +K+PE LAKY D ESE+++ L Q +TVFKYI+DK
Sbjct: 385 ACREFVNRNKICKSGSTKTPELLAKYTDSLLKRGSKAAEESELEEMLVQIMTVFKYIEDK 444
Query: 297 DVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNE 356
DVF KFY+KMLAKRL+H S S D E +MI+KLK+ACG+E+TNK RM DI+IS LN
Sbjct: 445 DVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNS 504
Query: 357 KF----HSEFVKTNEIDLGIHFSINILQAGSWPL-GPTVISSFSVPQELEKCIHMFEKFY 411
+ F+ ++ + IL G WPL P+ +SF P E+ K F+KFY
Sbjct: 505 SYKDWLEKSFLDDDDRKKLVDSHFQILGTGFWPLTAPS--TSFLAPPEIVKTSERFQKFY 562
Query: 412 HGQFNGRKLSWLHNISQVELKLSYLKR---PYFVTMQTFQMAILLLFEKNDAMTCGDIQT 468
+ NGRKL+WL + + ELK +Y+K PY + T+QM ILLLF ++D +T DIQ
Sbjct: 563 CDKHNGRKLTWLWQLCKGELKANYIKNTKVPYTFLVSTYQMGILLLFNESDTLTYSDIQK 622
Query: 469 VLSLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQ 528
+L+ + + +++ ++ K+L + E + +L YN K K+K++ +Q + Q
Sbjct: 623 ATTLTPEILDPNLSIFLKAKVLNISPEGSKPGPDSTFSLNYNFKNKKIKVNLNIQIRSEQ 682
Query: 529 EIER--TVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKC 585
++E T +++EDRKL LQ+AIVRIMKSRK+++H L+QEV+ Q KS F P + IKK
Sbjct: 683 KVETDDTHKTIEEDRKLLLQSAIVRIMKSRKKMKHVQLVQEVIHQVKSRFPPQVPDIKKN 742
Query: 586 IESLIDKNYVERTANSTDEYSYVA 609
IE+L++K+Y+ER DE +Y+A
Sbjct: 743 IEALMEKDYIERLDG--DEIAYIA 764
Score = 48 (22.0 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 19/93 (20%), Positives = 36/93 (38%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITL--GNVRRATWNDRFSDIYSLCVAYPEPLADRLY 58
M P + D +TW L+ I V+ V + ++ +++ C ++ +
Sbjct: 5 MPQAPHKDDLEETWVFLENGINNVMVKLEDGVDMKNYMALYTAVHNFCTSHKAVSGQAIQ 64
Query: 59 -QETKLFLDQHLYVDIFETQFLEMSGEWYKSEA 90
Q L + LY + E +L EW E+
Sbjct: 65 AQRGAHLLGEELYRKLGE--YLSRHLEWVHGES 95
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
Identities = 212/560 (37%), Positives = 318/560 (56%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNR--------SVRF 120
+Y FE +F+ + +Y+ E+ L T V++Y++ V L EET R + +
Sbjct: 218 VYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLSY 277
Query: 121 LHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILID 180
LH ++ +K+ CE+ ++ HL E ++ +R DL MY L+ + + L
Sbjct: 278 LHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKS 337
Query: 181 AVRDHICKQGLEAISGL-SGD--NISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDK 237
+ +HI QG EAI+ + D N +V+ +L VHKKY A V F+ D F+ ALDK
Sbjct: 338 ILENHILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDK 397
Query: 238 ACSSVINHKFDP--KMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDD 295
AC IN SKSPE LAKYCD+ + E++D L+Q + VFKYI+D
Sbjct: 398 ACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMVVFKYIED 457
Query: 296 KDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLN 355
KDVF K+Y+KMLAKRL++ S S D E MI+KLKQ CGYE+T K RM DI +S LN
Sbjct: 458 KDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLN 517
Query: 356 EKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQF 415
F +++ + + I F I +L +GSWP + ++F +P ELE+ + F +FY +
Sbjct: 518 SYF-KQYLAEKNLTMEIDFGIEVLSSGSWPF--QLSNNFLLPSELERSVRQFNEFYAARH 574
Query: 416 NGRKLSWLHNISQVELKLSYLKR---PYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSL 472
+GRKL+WL+ + + EL ++ + Y + TFQM++LL F + T +Q
Sbjct: 575 SGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQT 634
Query: 473 SQDQIGRHIASLVECKLLTS--NKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEI 530
Q+ + + + L++ K+LTS N+ LT ++ + L L Y NK+ ++ I+ ++ E E
Sbjct: 635 QQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQ 694
Query: 531 ERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESL 589
E ++EDRKL +QAAIVRIMK RK++ H LI EVL+Q S F P + +IKKCI+ L
Sbjct: 695 ETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDIL 754
Query: 590 IDKNYVERTANSTDEYSYVA 609
I+K Y+ER D YSY+A
Sbjct: 755 IEKEYLERMEGHKDTYSYLA 774
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 806 (288.8 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 164/449 (36%), Positives = 265/449 (59%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D+ LY+ +E +LE + ++Y E+ + + +S YM++ + EE RS ++L+ SS
Sbjct: 190 DRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSS 249
Query: 126 YPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDH 185
+ K++ ++ H LQ EC+ + +E+ ++ NMY LL + G+ +++ V+ +
Sbjct: 250 HDKMRRLLHSILIEKHKELLQSECINYLKDEKLDEIYNMYKLLSRIEGGLAPVLETVQKY 309
Query: 186 ICKQGLEAISGLSGDNISTQ--FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVI 243
I G++AI + N +VE +L ++ ++ + +K+ F+ D SF+ LD AC +
Sbjct: 310 IQHVGIDAIKSIPDRNNPDPKIYVETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIF 369
Query: 244 NHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFY 303
N + +KSPE LAKYCDM E E+++KL Q I +FKY+DDKDVF KFY
Sbjct: 370 NQNHITRNTTKSPELLAKYCDMLLKKGNKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFY 429
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
+KML++RLI+ S S D E+ MI LKQACG+E+T+KF RM DI +S NE+F + +
Sbjct: 430 SKMLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLI 489
Query: 364 KTNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSW 422
K N + +G I FSI +L +GSW L SSF VPQEL CI F+++Y Q GRKL+W
Sbjct: 490 K-NSLSIGKIDFSILVLTSGSWSLHSQT-SSFIVPQELTLCISAFQQYYSTQHQGRKLNW 547
Query: 423 LHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIA 482
LH++ + E K + K+ Y + FQ+ ILL+F ++++ +I +L+++++ R +
Sbjct: 548 LHHLCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQ 607
Query: 483 SLVECKLLTSNKEELTEDTEIRLNLGYNN 511
SL+E K+L S K++ N NN
Sbjct: 608 SLIEAKILISKKKDQNSINNNNNNNNNNN 636
Score = 315 (115.9 bits), Expect = 5.1e-32, Sum P(3) = 5.1e-32
Identities = 70/168 (41%), Positives = 101/168 (60%)
Query: 443 TMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDTE 502
T+Q+ A +L+ +K D + + + + + G SLV+ + E
Sbjct: 605 TLQSLIEAKILISKKKDQNSINNNNNNNNNNNNN-GEGNNSLVDSANNMQPSSSSSSTQE 663
Query: 503 IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHN 562
+N Y+NKR+K+K+S ++QKETP + E T +DEDRKLYLQA+IVRIMK+RK + H
Sbjct: 664 YTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHV 723
Query: 563 ALIQEVLSQSK-SFAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+LIQEV+ S+ F P+I MIKKCIE LI+K Y+ R +D Y Y A
Sbjct: 724 SLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
Score = 113 (44.8 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFL 65
+ +DFN W ++ + + ++T G+ + + + D+Y LC+A P+P + LY+ K F
Sbjct: 8 QDIDFNTIWKNIADQVYKILT-GS-QNVSAMFLYEDVYKLCIAQPQPYCEPLYENIKKFF 65
Query: 66 DQHL 69
+QH+
Sbjct: 66 EQHV 69
Score = 40 (19.1 bits), Expect = 5.1e-32, Sum P(3) = 5.1e-32
Identities = 10/41 (24%), Positives = 25/41 (60%)
Query: 87 KSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFL-HVSSY 126
K +L+Q +SQ+ME ++++ + +R++ + + +SY
Sbjct: 162 KDRDGELVQHQFISQFMESLIKLDSVDKDRTLYLIEYEASY 202
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 192/558 (34%), Positives = 318/558 (56%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTC-NVSQYMERVLQVLHEETNRSVRFLHVSSYP 127
+Y + FE +FLE + +Y EA+ L NV+ YM +V L++E +R +L+ S+
Sbjct: 227 VYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKT 286
Query: 128 KVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHIC 187
+ CE ++++ L+FLQ ++ ++R DL+ M+ L V G++ L ++ +HI
Sbjct: 287 PLATCCESVLISNQLDFLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIA 346
Query: 188 KQGLEAISGLSGDNISTQ--FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINH 245
K+G +A+ ++ + + +V+ +L VH++Y++ V F + FM +LDKA +S IN+
Sbjct: 347 KEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINN 406
Query: 246 KFDPKM--P----SKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVF 299
K P +KS E LA+YCD E+E+++ ++ + VFKYIDDKDVF
Sbjct: 407 NAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVF 466
Query: 300 HKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFH 359
KFY KM +KRLI + S S + E I KLK CGYE+T + +M+ D ++S L F
Sbjct: 467 SKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFK 526
Query: 360 SEFVKTNEI-DLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGR 418
+ K + + + F++ +L +GSWP PT + ++PQ+L K I +F +FY+ +FNGR
Sbjct: 527 EK--KADMLGQKSVEFNVLVLSSGSWPTFPT--TPITLPQQLSKTIEIFGQFYNEKFNGR 582
Query: 419 KLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIG 478
+L+W+++ S+ E+ + + Y T T QM +LLF + D+ T I + +
Sbjct: 583 RLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAP 642
Query: 479 RHIASLVECKLLTSNKEELTED-----TEIRLNLGYNNKRTKLKISGAVQKETP-QEIER 532
+ SL++ +L ++ E ED + LN Y NK+ ++ +S K+ ++ E
Sbjct: 643 AIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRVDLSKFTMKQDAVRDTEN 702
Query: 533 TVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLID 591
+V+EDRK + A IVRIMK+RK+++H L+ EV++Q S F P + MIK+CI SLI+
Sbjct: 703 VQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIE 762
Query: 592 KNYVERTANSTDEYSYVA 609
K Y+ RT D Y Y+A
Sbjct: 763 KEYMLRTEGQKDLYEYLA 780
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 180/554 (32%), Positives = 298/554 (53%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y FET F+E + +Y E+S+ L + +++ Y+++ L EE +LH S+ +
Sbjct: 221 YKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPL 280
Query: 130 KAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQ 189
E ++A H L + M+ + D+ MY L+ G+ L + + +
Sbjct: 281 LEATEDVLIAQHEEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRS 340
Query: 190 GLEAIS------GLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVI 243
G A++ G D +++E +L+ +K K V F GD F +LD A ++
Sbjct: 341 GFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELV 400
Query: 244 NHKFD-PKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKF 302
N + S+SPE LAKY D +++D LS I +F+Y++DKDVF F
Sbjct: 401 NRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNF 460
Query: 303 YAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHS-E 361
Y K+LAKRL++ S S D E +M++KLK+ CG+E+T+K RM DI +S + E F
Sbjct: 461 YTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQLP 520
Query: 362 FVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLS 421
+ ID FS +L WPL P ++ F +P+EL F+ +Y+ NGRKLS
Sbjct: 521 QSRAGNID----FSALVLGTSFWPLSPNNVN-FHLPEELVPLYEGFQNYYYSCHNGRKLS 575
Query: 422 WLHNISQVELKLSYLKRP---YFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIG 478
WL ++S+ E+K + Y + T+QM +LLL+ D+ T ++ + LS D +
Sbjct: 576 WLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLT 635
Query: 479 RHIASLVECK-LLTSNKEELTE-DTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSS 536
+ ++ K LL + ++L + ++ ++N + K+ +++++ ++ E QE T +
Sbjct: 636 GILNIFLKAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQKQESLETHKT 695
Query: 537 VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYV 595
++EDRKL LQ+AIVRIMK+R+ ++H L++E + Q KS F P +S IK+CI+ LI+K Y+
Sbjct: 696 IEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYL 755
Query: 596 ERTANSTDEYSYVA 609
ER DEY Y+A
Sbjct: 756 ERQGR--DEYIYLA 767
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 543 (196.2 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 128/467 (27%), Positives = 235/467 (50%)
Query: 67 QHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSY 126
+++Y++ FE L + Y++++ L+QTC+ YM++V L EE R +L SS
Sbjct: 193 KNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSE 252
Query: 127 PKVKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAV 182
PK+K CE+ ++++H+ L + M+ +++ DL MY L V +G+N++ D +
Sbjct: 253 PKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVI 312
Query: 183 RDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSV 242
++ + G + S + +++L + KY ++ D+ F+ ++ +A
Sbjct: 313 SSYVKEIGRGIVMDEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYF 372
Query: 243 INHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKF 302
IN +PK SPEY++ + D E E+D L + + +F+ I +KDVF K+
Sbjct: 373 IN--LNPK----SPEYISLFIDEKLKKGLKGVSEEEVDIILDKILMLFRLIQEKDVFEKY 426
Query: 303 YAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEF 362
Y + LAKRL+ +S S D E MI KLK CGY+FT+K M TD+++S F + +
Sbjct: 427 YKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSGFKT-Y 485
Query: 363 VKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSW 422
++ + L I ++++L G WP T ++ ++P+E+ C F+ +Y NGR L W
Sbjct: 486 IQNLKKALPIDLNVHVLTTGFWPTQNT--ANCNLPREILLCCEAFKSYYLSNHNGRLLLW 543
Query: 423 LHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIA 482
N+ E+K ++ + + + + ++QM ILLLF +T +I + + R++
Sbjct: 544 QTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLL 603
Query: 483 SLV--ECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETP 527
+L + K+L T T ++ + S + TP
Sbjct: 604 ALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTP 650
Score = 232 (86.7 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 48/116 (41%), Positives = 74/116 (63%)
Query: 495 EELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMK 554
+ + E N + +K ++K+ VQKETP E + T VDEDRK ++A+IVRIMK
Sbjct: 654 KSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMK 713
Query: 555 SRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+RK + H+ L+ EV+ Q +S F P+ ++KK IESLI++ Y+ER+ Y+Y+A
Sbjct: 714 ARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
Score = 74 (31.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 9 DFNK-TWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQ 67
DF K TW L +T I N ++ + + + Y++ + + D LY K +D+
Sbjct: 24 DFPKRTW-KLLKTAMRQIHQQNASNLSFEELYRNGYNMVL---QKHGDLLYNNLKKMVDK 79
Query: 68 HLYV-------DIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRF 120
HL I E LE++ W + S +L ++ YM+R + + SV
Sbjct: 80 HLKAVAKTVSESIDEKFLLELNSSWINHKTS-MLMIRDILMYMDR--NYVKQNNLSSVFD 136
Query: 121 LHVSSYPKVKAKCEQHMVADHL-NFLQGECVPMVAEERRHDLANMYPLLRSVREGINILI 179
L + + A C + D L N L + MV +ER ++ + L++++ + +LI
Sbjct: 137 LGLYLFRDNVAHCST--IKDRLLNTL----LSMVQKEREGEVIDRI-LIKNI---VQMLI 186
Query: 180 D 180
D
Sbjct: 187 D 187
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 705 (253.2 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 171/549 (31%), Positives = 287/549 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 347 DLQIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQST 406
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 407 QKPLIATVEKQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIE 466
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 467 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFIN 523
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 524 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 578
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 579 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQQYMQ 638
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
+ I ++NIL G WP V +P E+ K +F+ FY G+ +GRKL W
Sbjct: 639 NQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQS 696
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F + + + +I+ + ++ R + SL
Sbjct: 697 TLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSL 756
Query: 485 V--ECKLLT-SNKEELTEDTE-IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
+ ++LT S K + ED + N + +K ++KI+ KET +E T V +D
Sbjct: 757 ACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQD 816
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 817 RQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDKE 875
Query: 601 STDEYSYVA 609
+ ++Y+Y+A
Sbjct: 876 NPNQYNYIA 884
Score = 55 (24.4 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 175 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 230
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 231 RQICEDHIKAQIH--QFREDS 249
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 176/562 (31%), Positives = 301/562 (53%)
Query: 62 KLFLD--QHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVR 119
K+F+D + +Y D FE FLE S E+YK E+ + +++C+ +Y+++ + L EE R V
Sbjct: 182 KMFMDLGESVYQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVN 241
Query: 120 FLHVSSYPKVKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGI 175
+L S K+ + E+ M+A+H+ L V M+ ++ D+ MY L R V G+
Sbjct: 242 YLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGL 301
Query: 176 NILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGAL 235
+ D + H+ + G + ++ +FV+ +L KY + F+ D++F AL
Sbjct: 302 VTVRDVMTLHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDRIINMAFNNDKTFQNAL 361
Query: 236 DKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDD 295
+ + +N + ++SPE+++ + D E ++D L + + +F+Y+ +
Sbjct: 362 NSSFEYFVN------LNTRSPEFISLFVDDKLRKGLKGVGEEDVDLILDKVMMLFRYLQE 415
Query: 296 KDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLN 355
KDVF K+Y + LAKRL+ ++ S D E +I KLK CGY+FT+K M TD+K S
Sbjct: 416 KDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTL 475
Query: 356 EKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQF 415
F++ + +E G + +L GSWP PT+ ++P E+ F +Y G
Sbjct: 476 LGFYNSHPELSE---GPTLVVQVLTTGSWPTQPTI--QCNLPAEVSVLCEKFRSYYLGTH 530
Query: 416 NGRKLSWLHNISQVELKLSYLK-RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQ 474
GR+LSW N+ ++K + K + + + + TFQM +L+LF +D ++ +I+ +
Sbjct: 531 TGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPT 590
Query: 475 DQIGRHIASLVECK---LLTSN--KEELTEDTEIRLNLGYNNKRTKLKISGAV-QKETPQ 528
+ R + S+ K +L +E+ E+ +N + +K K+KI V QKET
Sbjct: 591 PDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASKFYKVKIGTVVAQKETEP 650
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIE 587
E + T V+EDRK ++AAIVRIMKSR+ + HN +I EV Q ++ F + + IKK IE
Sbjct: 651 EKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQTRFLANPTEIKKRIE 710
Query: 588 SLIDKNYVERTANSTDEYSYVA 609
SLI+++++ER Y Y+A
Sbjct: 711 SLIERDFLERDNTDRKLYRYLA 732
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 700 (251.5 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 167/549 (30%), Positives = 286/549 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE QFL+ + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 434 DLQIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 493
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 494 QKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE 553
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 554 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFIN 610
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 611 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 665
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 666 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQ 724
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
+ I ++NIL G WP V +P E+ K +F+ FY G+ +GRKL W
Sbjct: 725 NQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQS 782
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F + + + +I+ + ++ R + SL
Sbjct: 783 TLGHCVLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSL 842
Query: 485 V--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
+ ++L N + ++ + + N + +K ++KI+ KET +E T V +D
Sbjct: 843 ACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQD 902
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 903 RQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDKE 961
Query: 601 STDEYSYVA 609
+ ++Y+Y+A
Sbjct: 962 NPNQYNYIA 970
Score = 53 (23.7 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC ++ LY++
Sbjct: 262 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC---SHKISANLYKQL 317
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 318 RQICEDHIKAQIH--QFREDS 336
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 696 (250.1 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 167/549 (30%), Positives = 286/549 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 429 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 488
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 489 QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE 548
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 549 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 605
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 606 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 660
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 661 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQ 719
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
+ I ++NIL G WP V +P E+ K +F+ FY G+ +GRKL W
Sbjct: 720 NQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQS 777
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F + + + +I+ + ++ R + SL
Sbjct: 778 TLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSL 837
Query: 485 V--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
+ ++L N + ++ + + N + +K ++KI+ KET +E T V +D
Sbjct: 838 ACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQD 897
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 898 RQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDKE 956
Query: 601 STDEYSYVA 609
+ ++Y+Y+A
Sbjct: 957 NPNQYNYIA 965
Score = 57 (25.1 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 257 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 312
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 313 RQICEDHIKAQIH--QFREYS 331
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 696 (250.1 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 167/549 (30%), Positives = 286/549 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 364 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 423
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 424 QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE 483
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 484 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 540
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 541 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 595
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 596 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQ 654
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
+ I ++NIL G WP V +P E+ K +F+ FY G+ +GRKL W
Sbjct: 655 NQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQS 712
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F + + + +I+ + ++ R + SL
Sbjct: 713 TLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSL 772
Query: 485 V--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
+ ++L N + ++ + + N + +K ++KI+ KET +E T V +D
Sbjct: 773 ACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQD 832
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 833 RQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDKE 891
Query: 601 STDEYSYVA 609
+ ++Y+Y+A
Sbjct: 892 NPNQYNYIA 900
Score = 55 (24.4 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 192 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 247
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 248 RQICEDHIKAQIH--QFREDS 266
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 696 (250.1 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 167/549 (30%), Positives = 286/549 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 377 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 436
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 437 QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE 496
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 497 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 553
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 554 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 608
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 609 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQ 667
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
+ I ++NIL G WP V +P E+ K +F+ FY G+ +GRKL W
Sbjct: 668 NQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQS 725
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F + + + +I+ + ++ R + SL
Sbjct: 726 TLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSL 785
Query: 485 V--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
+ ++L N + ++ + + N + +K ++KI+ KET +E T V +D
Sbjct: 786 ACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQD 845
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 846 RQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDKE 904
Query: 601 STDEYSYVA 609
+ ++Y+Y+A
Sbjct: 905 NPNQYNYIA 913
Score = 55 (24.4 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 205 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 260
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 261 RQICEDHIKAQIH--QFREDS 279
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 690 (248.0 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 168/550 (30%), Positives = 285/550 (51%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 348 DLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQST 407
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 408 QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIE 467
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ + +A + IN
Sbjct: 468 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDVCFMKNEKFVNGMKEAFETFIN 524
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYI-DDKDVFHKFY 303
K P+K E +AKY D + E++ L + + +F++I + KDVF FY
Sbjct: 525 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYEGKDVFEAFY 579
Query: 304 AKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFV 363
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F + +
Sbjct: 580 KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQF-KQHM 638
Query: 364 KTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
+ I I ++NIL G WP V +P E+ + +F+ FY G+ +GRKL W
Sbjct: 639 QCQNIPGNIELTVNILTMGYWPT--YVPMEVHLPAEMVRLQEIFKTFYLGKHSGRKLQWQ 696
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ LK + + + + FQ +LL+F + + + DI+ + ++ R + S
Sbjct: 697 STLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDSELRRTLQS 756
Query: 484 LV--ECKLLTS--NKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L + ++LT +++ + + N + +K ++KI+ KET +E T V +
Sbjct: 757 LACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQ 816
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 817 DRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDK 875
Query: 600 NSTDEYSYVA 609
+ ++Y+YVA
Sbjct: 876 ENPNQYNYVA 885
Score = 61 (26.5 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 17/79 (21%), Positives = 39/79 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + N+TW L+E ++ + +++ + + + +LC ++ +LY++
Sbjct: 176 KPKLPENYTNETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC---SHKISAKLYKQL 231
Query: 62 KLFLDQHLYVDIFETQFLE 80
++ + H+ I QF E
Sbjct: 232 RVVCEDHIKAQI--DQFRE 248
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 696 (250.1 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
Identities = 167/549 (30%), Positives = 286/549 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 446 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 505
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 506 QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE 565
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 566 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 622
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 623 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 677
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 678 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQ 736
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
+ I ++NIL G WP V +P E+ K +F+ FY G+ +GRKL W
Sbjct: 737 NQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQS 794
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F + + + +I+ + ++ R + SL
Sbjct: 795 TLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSL 854
Query: 485 V--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
+ ++L N + ++ + + N + +K ++KI+ KET +E T V +D
Sbjct: 855 ACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQD 914
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID++Y+ER
Sbjct: 915 RQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDRDYMERDKE 973
Query: 601 STDEYSYVA 609
+ ++Y+Y+A
Sbjct: 974 NPNQYNYIA 982
Score = 55 (24.4 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 274 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 329
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 330 RQICEDHIKAQIH--QFREDS 348
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 181/561 (32%), Positives = 301/561 (53%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y FE QFL+ + +YK+E++ ++ V +YM V + +ETNR +++ +S+ K
Sbjct: 192 IYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEK 251
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ +++++ + + ++ E++ DL MY LL V + L + D I
Sbjct: 252 LTKILNNVLISNYKEQFASKFLDILIEDKSSDLVMMYSLLSRVNH-LTPLKNIFSDFIKS 310
Query: 189 QGLEAI-SGLSGDNISTQ-FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHK 246
+GL+ I S L Q + +L ++ ++ +KE + D F A+DK+ S ++N
Sbjct: 311 EGLKEIESNLKEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKSFSILVNEN 370
Query: 247 ---FDPKMP-SKSPEYLAKYCDMXXXXX-XXXXXESEMDDKLSQSITVFKYIDDKDVFHK 301
+DPK S P L+K+CD E+E++ KL++++ +FKY+ DKD+F
Sbjct: 371 PASYDPKKKESNIPVVLSKFCDQILRKGPHHISDEAELEKKLTEAVCLFKYLPDKDIFML 430
Query: 302 FYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSE 361
Y KML+KRL+ S S D E MINKLK G+++ K RM+TD+++ +N F +
Sbjct: 431 NYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQNH 490
Query: 362 FVKTNEIDLGIHFSINILQAGSWPL-GPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKL 420
+ + L F+ +L GSW L + F P E+ I FE FY + GR L
Sbjct: 491 -LNEKSLTLPYQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSITYFESFYKKSYQGRVL 549
Query: 421 SWLHNISQVELKLSYLK-RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGR 479
++L++ S+ ++ K + Y +T +QMAILL+F D +T I + L + I
Sbjct: 550 TFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGLDETSIRL 609
Query: 480 HIASLVECKLLTSNKEEL---TEDTEIRLNLGYNNKRTKLKISGAVQ-KETPQ-EIERTV 534
+ +L++ ++ ++ DTE +N +++K+ K+ + AVQ ET Q E ++TV
Sbjct: 610 PLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQTV 669
Query: 535 SS--VDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLID 591
S ++++R LQAAIVRIMKS+K + HN L E +Q SK F P I+ IKK IE LID
Sbjct: 670 SEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLID 729
Query: 592 KNYVERTAN---STDEYSYVA 609
+ Y+ RT + S +Y Y+A
Sbjct: 730 QEYIRRTTDDNPSARKYEYMA 750
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 174/562 (30%), Positives = 299/562 (53%)
Query: 62 KLFLD--QHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVR 119
K+F+D + +Y + FE FL+ S E+YK E+ + +++C+ Y+++ + L EE R
Sbjct: 182 KMFMDLGESVYQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAH 241
Query: 120 FLHVSSYPKVKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGI 175
+L S K+ + E+ M+A+H+ L V M+ ++ DL MY L R V G+
Sbjct: 242 YLDAKSEEKITSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGL 301
Query: 176 NILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGAL 235
+ D + H+ + G + ++ +FV+ +L KY + F D++F AL
Sbjct: 302 VTVRDVMTSHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNAL 361
Query: 236 DKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDD 295
+ + IN + ++SPE+++ + D + +++ L + + +F+Y+ +
Sbjct: 362 NSSFEYFIN------LNARSPEFISLFVDDKLRKGLKGITDVDVEVILDKVMMLFRYLQE 415
Query: 296 KDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLN 355
KDVF K+Y + LAKRL+ ++ S D E ++I KLK CGY+FT+K M TD+K S
Sbjct: 416 KDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTM 475
Query: 356 EKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQF 415
F+ + +E G + +L GSWP P V ++P E+ F +Y G
Sbjct: 476 RGFYGSHPELSE---GPTLIVQVLTTGSWPTQPAV--PCNLPAEVSVLCEKFRSYYLGTH 530
Query: 416 NGRKLSWLHNISQVELKLSYLK-RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQ 474
GR+LSW N+ ++K + K + + + + TFQM +L+LF +D ++ +I+ +
Sbjct: 531 TGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPA 590
Query: 475 DQIGRHIASL--VECKLLTSNK---EELTEDTEIRLNLGYNNKRTKLKISGAV-QKETPQ 528
+ R + SL V+ K + + +++ E+ +N + +K K+KI V QKET
Sbjct: 591 ADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQKETEP 650
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIE 587
E + T V+EDRK ++AAIVRIMKSRK + HN +I EV Q + F + + IKK IE
Sbjct: 651 EKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIE 710
Query: 588 SLIDKNYVERTANSTDEYSYVA 609
SLI+++++ER + Y Y+A
Sbjct: 711 SLIERDFLERDSTDRKLYRYLA 732
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 673 (242.0 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 167/554 (30%), Positives = 283/554 (51%)
Query: 62 KLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFL 121
++ D +Y FE +FL+ + + YK+E+ + +Q V +Y++ V + L EE R +L
Sbjct: 280 RMLCDLQIYTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYL 339
Query: 122 HVSSYPKVKAKCEQHMVADHL-NFLQGECVPMVAEERRHDLANMYPLLRSVREGINILID 180
S+ + E+ ++A+HL + LQ ++ + R DL +Y LL V+ G + L
Sbjct: 340 DSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCG 399
Query: 181 AVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACS 240
I K+G + D V+++L K V+ F ++ F +L +A
Sbjct: 400 NFNGFIKKKGRTIVIDPEKDK---SMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFE 456
Query: 241 SVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFH 300
IN + +K E +AKY DM + E++ L + + +F++I KDVF
Sbjct: 457 FFINQR-----ANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVLFRFIHGKDVFE 511
Query: 301 KFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHS 360
FY K LAKRL+ +S S+D E++M++KLKQ CG FT+K M D+++S +N F
Sbjct: 512 AFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDINIAFRG 571
Query: 361 EFVKTNEIDLGIHFSINILQAGSWPL-GPTVISSFSVPQELEKCIHMFEKFYHGQFNGRK 419
+ N + ++IL G WP PT ++ +P + +F KFY + +GRK
Sbjct: 572 HALSNNRDVHNLDLCVSILTMGYWPTYAPTEVT---MPPQFINPQQIFNKFYLEKHSGRK 628
Query: 420 LSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGR 479
L W + L+ + P + + FQ +LLLF ++ +I + ++ R
Sbjct: 629 LQWQPTLGNCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRR 688
Query: 480 HIASLV--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVS 535
+ SL +++T + E+ + + N + NK ++KI+ KET +E + T
Sbjct: 689 TLQSLACGRARVITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEEQKATEE 748
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
V +DR+ + AAIVRIMK RK + HN LI E+ +Q +F + +KK IESLID++Y+
Sbjct: 749 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQL-TFPVKPADLKKRIESLIDRDYM 807
Query: 596 ERTANSTDEYSYVA 609
ER ++ ++Y+YVA
Sbjct: 808 ERDKDNQNQYNYVA 821
Score = 50 (22.7 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 4 KPKQVD-FNK-TWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KP D ++K T+ L+E + I L + + + + + ++C + +LY +
Sbjct: 110 KPTLPDNYSKDTYVKLEEAVIA-IQLSKPIKYSLEELYQAVVNMC---SHKMDAQLYAKL 165
Query: 62 KLFLDQHLYVDIFETQF----------LEMSGEWYKSEASKLLQTCNVSQYMERVLQVLH 111
K +QH+ +I + LE W+ S +++ ++ YM+R VL
Sbjct: 166 KELTEQHVKRNIKLKELTGGSMDKLILLEKINHWWLSFCQQMIMIRSIFLYMDRTY-VLQ 224
Query: 112 EETNRSV 118
T S+
Sbjct: 225 NSTVHSI 231
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 680 (244.4 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 173/559 (30%), Positives = 283/559 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y FE QFL+ + +YK E +T V +YM V L +E RS R+L S+
Sbjct: 184 IYKVSFEPQFLDATKLFYKQEVLNSKET--VIEYMITVENRLFQEEYRSRRYLGPSTNDL 241
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ CE +++D L FL E ++ + L MY L R V G+ L + I K
Sbjct: 242 LIDSCESILISDRLKFLHSEFERLLEARKDEHLTRMYSLCRRVTHGLEDLRVYLEKRILK 301
Query: 189 QGLEAISGLSGDN-IST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+G E + L+ D+ + T +++ +L VH+ Y + + F + FM +LDKA I
Sbjct: 302 EGHETLQRLAKDSGLKTTPKEYITKLLEVHEIYFNLINKAFDRNALFMQSLDKASKDFIE 361
Query: 245 HKFDPKM-PSK-----SPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDV 298
+ P K S +YLA+YCD E+ +D +++TV KYI +KDV
Sbjct: 362 ANAVTMLAPEKHRSTRSADYLARYCDQLLKKNSKVQDETALD----KALTVLKYISEKDV 417
Query: 299 FHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKF 358
F +Y ++R+I+ S S D EE I L G E+T +M+ D KIS L +F
Sbjct: 418 FQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEF 477
Query: 359 HSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGR 418
+KT + I F++ + G+WP + +P+EL + F+ FY+ NGR
Sbjct: 478 KD--IKTEK---SIDFNVILQTTGAWPSLDQI--KIILPRELSTILKEFDTFYNASHNGR 530
Query: 419 KLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIG 478
+L+W ++ + E+ ++ Y + Q+ L LF + D+ T I + ++
Sbjct: 531 RLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTS 590
Query: 479 RHIASL---VECKLLT---SNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETP-QEIE 531
+ SL ++ L+ + K+ D + LN Y NK+ ++ ++ A++K T +E +
Sbjct: 591 AIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETD 650
Query: 532 RTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLI 590
++V+ DRK ++A IVRIMK+RK + H LI E++SQ KS F P++ MIK CIE LI
Sbjct: 651 AVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILI 710
Query: 591 DKNYVERTANSTDEYSYVA 609
++ Y+ R+ N + Y Y+A
Sbjct: 711 EQLYIRRSENEHNVYEYLA 729
Score = 42 (19.8 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 18/111 (16%), Positives = 44/111 (39%)
Query: 14 WGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLYVDI 73
WG+LQ+ + + ++ + + + +Y++C LA+ + F + LY +
Sbjct: 7 WGTLQDGLNLLYRREHMSKKYYMMLYDAVYNICTT--TTLANSNNNSPE-FASEFLYKQL 63
Query: 74 ---FETQFLEMSGEWYKSEASKLLQTCNVS----QYMERVLQVLHEETNRS 117
T + + +LL C + ++ R+ + + NR+
Sbjct: 64 ENYIRTYVIAIRDRISACSGDELLGKCTIEWDNFKFSTRICNCIFQYLNRN 114
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 660 (237.4 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 174/550 (31%), Positives = 280/550 (50%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 223 DLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 282
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DLA MY L VR G L+ +
Sbjct: 283 QKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSE 342
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+++L K ++ F ++ F+ + ++ + IN
Sbjct: 343 YIKTFGTAIVINPEKDK---DMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFIN 399
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AK+ D + E++ L + + +F++I KDVF FY
Sbjct: 400 -----KRPNKPAELIAKHVDSKLRAGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYK 454
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + F
Sbjct: 455 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHM-- 512
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
N+ D G I ++NIL G WP T + P E+ K +F+ FY G+ +GRKL W
Sbjct: 513 QNQSDSGPIDLTVNILTMGYWPTY-TPMEVHLTP-EMIKLQEVFKAFYLGKHSGRKLQWQ 570
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ LK + + + FQ +LL+F + D + +I+ + ++ R + S
Sbjct: 571 TTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQS 630
Query: 484 LVECK---LLTSNKEELTEDTE-IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L K L+ S K + ED + N + +K ++KI+ KET +E T V +
Sbjct: 631 LACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQ 690
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AAIVRIMK RK + HN L+ E+ +Q K F +KK IESLID++Y+ER
Sbjct: 691 DRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLK-FPVKPGDLKKRIESLIDRDYMERDK 749
Query: 600 NSTDEYSYVA 609
++ ++Y YVA
Sbjct: 750 DNPNQYHYVA 759
Score = 49 (22.3 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 13/61 (21%), Positives = 28/61 (45%)
Query: 13 TWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLYVD 72
TW L E ++ V + ++R + + + +LC P+ LY++ + + H+
Sbjct: 62 TWRKLHEAVRAVQSSTSIRY-NLEELYQAVENLCSHKVSPM---LYKQLRQACEDHVQAQ 117
Query: 73 I 73
I
Sbjct: 118 I 118
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 177/550 (32%), Positives = 283/550 (51%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y++ V + L EE +R + +L S+
Sbjct: 184 DLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITYLDHST 243
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL MY L VR G L+ D
Sbjct: 244 QKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSD 303
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+++L + + F + F+ + ++ + IN
Sbjct: 304 YIKTFGTTIVINPEKDK---DMVQDLLDFKDRVDHVIDVCFQRSEKFVNLMKESFETFIN 360
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AK+ D + E++ L + + +F++I KDVF FY
Sbjct: 361 -----KRPNKPAELIAKHVDSKLRAGNKEATDEELERMLDKVMILFRFIHGKDVFEAFYK 415
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + F ++++
Sbjct: 416 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF-KQYMQ 474
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
N+ D G I ++NIL G WP T + P E+ K +F+ FY G+ +GRKL W
Sbjct: 475 -NQSDPGSIDLTVNILTMGYWPTY-TPMEVHLTP-EMIKLQEVFKTFYLGKHSGRKLQWQ 531
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ LK + + + FQ +LL+F + D + DI+ + ++ R + S
Sbjct: 532 TTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIEDSELRRTLQS 591
Query: 484 LVECK---LLTSNKEELTEDTEIRL-NLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L K LL S K + ED + L N + +K ++KI+ KET +E T V +
Sbjct: 592 LACGKARVLLKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQVSTTERVFQ 651
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AAIVRIMK RK + HN L+ E+ +Q K F +KK IESLID++Y+ER
Sbjct: 652 DRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLK-FPVKPGDLKKRIESLIDRDYMERDK 710
Query: 600 NSTDEYSYVA 609
+S ++Y YVA
Sbjct: 711 DSPNQYHYVA 720
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 169/549 (30%), Positives = 279/549 (50%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 223 DLQVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHST 282
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL MY L V+ G + L+ +
Sbjct: 283 QKPLIACVEKQLLGEHLTAILQKGLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSE 342
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+++L K V+ F ++ F+ + ++ + IN
Sbjct: 343 YIKTFGTTIVINPEKDK---DMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFIN 399
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AK+ D + E++ L + + +F++I KDVF FY
Sbjct: 400 -----KRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAFYK 454
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + F + ++
Sbjct: 455 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF-KQHMQ 513
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
I ++NIL G WP + +P E+ + +F+ FY G+ +GRKL W
Sbjct: 514 NQSAPGPIDLTVNILTMGYWPTYTPM--EVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQT 571
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + FQ +LL+F + D + +I+ + ++ R + SL
Sbjct: 572 TLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSL 631
Query: 485 VECK---LLTSNKEELTEDTE-IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDED 540
K L+ S K + ED + N + +K ++KI+ KET +E T V +D
Sbjct: 632 ACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQD 691
Query: 541 RKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTAN 600
R+ + AAIVRIMK RK + HN L+ E+ +Q K F +KK IESLID++Y+ER +
Sbjct: 692 RQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLK-FPVKPGDLKKRIESLIDRDYMERDKD 750
Query: 601 STDEYSYVA 609
S ++Y YVA
Sbjct: 751 SPNQYHYVA 759
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 167/555 (30%), Positives = 281/555 (50%)
Query: 62 KLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFL 121
K+F +Y++ FE FLE + E+Y +E K +Q +V +Y++ V LHEE R + ++
Sbjct: 252 KMFTALGIYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILYI 311
Query: 122 HVSSYPKVKAKCEQHMVADH-LNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILID 180
+ + E+ ++ H L L+ ++ R DL M L V + L
Sbjct: 312 DAVTRKPLITTVERQLLERHILVVLEKGFTTLMDGRRTEDLQRMQTLFSRVN-ALESLRQ 370
Query: 181 AVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACS 240
A+ ++ K G + + D V+++L +E F ++SF + +
Sbjct: 371 ALSSYVRKTGQKIVMDEEKDK---DMVQSLLDFKASLDIIWEESFYKNESFGNTIKDSFE 427
Query: 241 SVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFH 300
+IN + ++ E +AK+ D E E++ L + + +F++I KDVF
Sbjct: 428 HLINLR-----QNRPAELIAKFLDEKLRAGNKGTSEEELESVLEKVLVLFRFIQGKDVFE 482
Query: 301 KFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHS 360
FY K LAKRL+ +S S+D E++MI+KLK CG +FTNK M DI++S +NE F
Sbjct: 483 AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 542
Query: 361 EFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKL 420
++ GI S+++L G WP P + +P EL +F++FY +++GR+L
Sbjct: 543 SSQARTKLPSGIEMSVHVLTTGYWPTYPPM--DVKLPHELNVYQDIFKEFYLSKYSGRRL 600
Query: 421 SWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCG--DIQTVLSLSQDQIG 478
W +++ LK + K + + FQ +L+LF NDAM DI+ S+ ++
Sbjct: 601 MWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLF--NDAMKLSFEDIKDSTSIEDKELR 658
Query: 479 RHIASLV--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTV 534
R + SL + ++L N + ++ + E N + ++K++ KET +E T
Sbjct: 659 RTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMKETVEENTSTT 718
Query: 535 SSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNY 594
V +DR+ + AAIVRIMK+RK + H LI E+ Q K F + +KK IESLID+ Y
Sbjct: 719 ERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLK-FPIKPADLKKRIESLIDREY 777
Query: 595 VERTANSTDEYSYVA 609
+ER ++ Y+Y+A
Sbjct: 778 LEREKSNPQIYNYLA 792
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 170/550 (30%), Positives = 286/550 (52%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 225 DLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 284
Query: 126 YPKVKAKCEQHMVADHLNFLQGECVPMVAEERR-HDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL + + + + +E R DL MY L V+ G IL+ +
Sbjct: 285 QKPLIACVEKQLLGEHLTAILHKGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSE 344
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+++L + ++ F ++ F+ + ++ + IN
Sbjct: 345 YIKTFGTTIVINPEKDK---DMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFETFIN 401
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AK+ D + E++ L + + +F++I KDVF FY
Sbjct: 402 -----KRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYK 456
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 457 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQF-KQYMQ 515
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
N+ D G I ++NIL G WP T + P E+ K +F+ FY G+ +GRKL W
Sbjct: 516 -NQSDPGSIDLTVNILTMGYWPTY-TPMEVHLTP-EMIKLQEVFKTFYLGKHSGRKLQWQ 572
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ LK + + + FQ +LL+F + D + +I+ + ++ R + S
Sbjct: 573 TTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQS 632
Query: 484 LVECK---LLTSNKEELTEDTE-IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L K L+ S K + ED + N + +K ++KI+ KET +E T V +
Sbjct: 633 LACGKARVLVKSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQ 692
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AAIVRIMK RK + HN L+ E+ +Q K F +KK IESLID++Y+ER
Sbjct: 693 DRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLK-FPVKPGDLKKRIESLIDRDYMERDK 751
Query: 600 NSTDEYSYVA 609
++ ++Y YVA
Sbjct: 752 DNPNQYHYVA 761
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 169/550 (30%), Positives = 283/550 (51%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y + FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 205 DLQVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDHST 264
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL Y L V+ G IL+ +
Sbjct: 265 QKPLIACVEKQLLGEHLTAILQKGLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSE 324
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K ++ F ++ F+ + ++ + IN
Sbjct: 325 YIKNFGTTIVVNPEKDK---DMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFIN 381
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 382 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYK 436
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 437 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQF-KQYMQ 495
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
N+ D G I ++NIL G WP + + E+ K +F+ FY G+ +GRKL W
Sbjct: 496 -NQSDPGNIDLTVNILTMGYWPTYTPM--EVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQ 552
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ LK + + + FQ +LL+F + D + +I+ + ++ R + S
Sbjct: 553 TTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELRRTLQS 612
Query: 484 LV--ECKLLTSN-KEELTEDTE-IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L + ++L N K + ED + N + +K ++KI+ KET +E T V +
Sbjct: 613 LACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQ 672
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AAIVRIMK RK + HN L+ E+ +Q K F +KK IESLID++Y+ER
Sbjct: 673 DRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLK-FPVKPGDLKKRIESLIDRDYMERDK 731
Query: 600 NSTDEYSYVA 609
++ ++Y YVA
Sbjct: 732 DNPNQYHYVA 741
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 173/550 (31%), Positives = 281/550 (51%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E +L+Q V +Y+ V + L EE +R + +L S+
Sbjct: 225 DLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHST 284
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL MY L VR G L+ +
Sbjct: 285 QKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSE 344
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+++L + + F ++ F+ + ++ + IN
Sbjct: 345 YIKTFGTTIVINPEKDK---DMVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFEAFIN 401
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AK+ D + E++ L + + +F++I KDVF FY
Sbjct: 402 -----KRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYK 456
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + F ++++
Sbjct: 457 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF-KQYMQ 515
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
N+ D G I ++NIL G WP T + P E+ K +F+ FY G+ +GRKL W
Sbjct: 516 -NQSDPGSIDLTVNILTMGYWPTY-TPMDVHLTP-EMVKLQEVFKTFYLGKHSGRKLQWQ 572
Query: 424 HNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIAS 483
+ LK + + + FQ +LL+F + D +I+ + ++ R + S
Sbjct: 573 TALGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELRRTLQS 632
Query: 484 LVECK---LLTSNKEELTEDTE-IRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L K L+ S K + ED + N + +K ++KI+ KET +E T V +
Sbjct: 633 LACGKARVLIKSPKGKEVEDGDKFFFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQ 692
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AAIVRIMK RK + HN L+ E+ +Q K F +KK IESLID++Y+ER
Sbjct: 693 DRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLK-FPVKPGDLKKRIESLIDRDYMERDK 751
Query: 600 NSTDEYSYVA 609
+S ++Y YVA
Sbjct: 752 DSPNQYHYVA 761
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 430 (156.4 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 102/360 (28%), Positives = 188/360 (52%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FL S +YK E+ L N Y+++V + EE++R+ +L + P+
Sbjct: 359 VYEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPR 418
Query: 129 VKAKCEQHMVADHLN-FLQGE---CVPMVAEERRHDLANMYPLLRSVRE-GINILIDAVR 183
+ E+ ++ H+ ++ E V M+ + DLA Y L ++E G+ ++ D +
Sbjct: 419 IVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLKEEGLKVIADTMS 478
Query: 184 DHICKQGLEAISGLSGDNIST-QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSV 242
++ +QG + N + FV+N+L + ++ F+ F+ D+ F + SS
Sbjct: 479 AYLREQGRMLVKEEENGNTNPITFVQNLLDLKDRFDQFLVHSFANDRIFKNVI----SSD 534
Query: 243 INHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKF 302
H + + +KSPEYL+ + D E E++ L +++ +F+++ +KDVF ++
Sbjct: 535 FEHFLN--LNNKSPEYLSLFIDDKLKKGGKGMSEQEIESILDKTMVLFRFLLEKDVFERY 592
Query: 303 YAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEF 362
Y LAKRL+ +S S D E+ MI+KLK CG +FT+K M D+ +S + ++F + F
Sbjct: 593 YKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIMDEFKN-F 651
Query: 363 VKTNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLS 421
V N + LG + ++ IL G WP T + ++P + +F+ FY + +GR+L+
Sbjct: 652 VNNNNLSLGGVELTVRILTTGFWPT-QTATPNCNIPAAPREAFDIFKNFYLNKHSGRQLT 710
Score = 280 (103.6 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 70/182 (38%), Positives = 104/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECK----LLTSN 493
R + + + T+QM +LLLF D +T DI + + ++ R + SL K LL N
Sbjct: 753 RKHILQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVRN 812
Query: 494 KEELTEDTE----IRLNLGYNNKRTKLKISGAVQK-ETPQEIERTVSSVDEDRKLYLQAA 548
+ T+D E +N +N+K ++KI K E+ E + T VDEDRK ++AA
Sbjct: 813 SKTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRKHEIEAA 872
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMK+RK++ HN L+ +V SQ KS F PS IKK IE LI++ Y++R+ Y+Y
Sbjct: 873 IVRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVYNY 932
Query: 608 VA 609
+A
Sbjct: 933 LA 934
Score = 56 (24.8 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 26/121 (21%), Positives = 51/121 (42%)
Query: 2 SLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
S+ K V+ W SL+ IQ + N ++ + + Y++ V + +RLY
Sbjct: 183 SMDEKYVE--TIWASLKNAIQEIQKKNN-SGLSFEQLYRNAYNM-VLHKH--GNRLYYGL 236
Query: 62 KLFLDQHLY----VDIFE---TQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEET 114
+ + +HL D+ E + FL + + + ++ ++ YM+RV E
Sbjct: 237 REVVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREVD 296
Query: 115 N 115
N
Sbjct: 297 N 297
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 430 (156.4 bits), Expect = 5.1e-63, Sum P(2) = 5.1e-63
Identities = 98/372 (26%), Positives = 190/372 (51%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSL 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E FS D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F + ++
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFR-QHLQ 492
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 493 TTGVSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 268 (99.4 bits), Expect = 5.1e-63, Sum P(2) = 5.1e-63
Identities = 69/182 (37%), Positives = 103/182 (56%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF D T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N--KEELTEDTEIRLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+E+ +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 431 (156.8 bits), Expect = 7.9e-63, Sum P(2) = 7.9e-63
Identities = 98/372 (26%), Positives = 190/372 (51%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSL 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E FS D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F + ++
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFR-QHLQ 492
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 493 TTGVSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 264 (98.0 bits), Expect = 7.9e-63, Sum P(2) = 7.9e-63
Identities = 68/182 (37%), Positives = 103/182 (56%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N--KEELTEDTEIRLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+E+ +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 430 (156.4 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 98/372 (26%), Positives = 190/372 (51%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSL 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E FS D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F + ++
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFR-QHLQ 492
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 493 TTGVSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 264 (98.0 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 68/182 (37%), Positives = 103/182 (56%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N--KEELTEDTEIRLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+E+ +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 159/562 (28%), Positives = 285/562 (50%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y + FE+ L+ + +Y +AS +Q + YM + + L +E R +LH SS PK+
Sbjct: 188 YEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPKL 247
Query: 130 KAKCEQHMVADHLN-FLQGE---CVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDH 185
K + ++ + L+ E C ++ +++ DL+ MY L + G+ + + + H
Sbjct: 248 VEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQH 307
Query: 186 ICKQGLEAISGLSGDNISTQ-----------FVENMLAVHKKYKAFVKELFSGDQSFMGA 234
+ +G A+ + D + Q + ++ +H KY +V E F F A
Sbjct: 308 VTAEG-NALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHTLFHKA 366
Query: 235 LDKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESE-MDDKLSQSITVFKYI 293
L +A N S S E LA +CD E ++D L + + + YI
Sbjct: 367 LKEAFEIFCNKTV---AGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYI 423
Query: 294 DDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGG 353
DKD+F +FY K LA+RL+ +S + D E +++ KLKQ CG +FT+K M+TD+ ++
Sbjct: 424 SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE 483
Query: 354 LNEKFHSEFVKTNEI-DLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYH 412
N+ +++ +N + GI ++ +L G WP + ++P E+ KC+ +F+ FY
Sbjct: 484 -NQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSF--DINLPSEMIKCVEVFKGFYE 540
Query: 413 GQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSL 472
+ RKL+W++++ + + ++ + + T+Q A+LLLF D ++ +I L+L
Sbjct: 541 TKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNL 600
Query: 473 SQDQIGR--HIASLVECKLLTS--NKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQ 528
S + + R H S + K+L N + ++++ N + ++ ++KI
Sbjct: 601 SHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIP----LPPVD 656
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIE 587
E ++ V VD+DR+ + AAIVRIMKSRK + H L+ E + Q S+ F P I IKK +E
Sbjct: 657 ERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 716
Query: 588 SLIDKNYVERTANSTDEYSYVA 609
LI ++Y+ER + + + Y+A
Sbjct: 717 DLITRDYLERDKENPNMFRYLA 738
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 427 (155.4 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 97/372 (26%), Positives = 187/372 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 178 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 237
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 238 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSS 297
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 298 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 357
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 358 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYK 411
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 412 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQS 471
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 472 TG-VSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 529
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 530 HHMGSADLNATF 541
Score = 265 (98.3 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 70/182 (38%), Positives = 105/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 566 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 624
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E+ I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 625 EPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 684
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 685 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 744
Query: 608 VA 609
VA
Sbjct: 745 VA 746
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 426 (155.0 bits), Expect = 4.1e-62, Sum P(2) = 4.1e-62
Identities = 97/372 (26%), Positives = 187/372 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 182 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 241
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 242 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSS 301
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 302 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 361
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 362 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYK 415
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 416 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQA 475
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 476 TG-VSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 533
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 534 HHMGSADLNATF 545
Score = 265 (98.3 bits), Expect = 4.1e-62, Sum P(2) = 4.1e-62
Identities = 70/182 (38%), Positives = 105/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 570 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 628
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E+ I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 629 EPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 688
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 689 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 748
Query: 608 VA 609
VA
Sbjct: 749 VA 750
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 426 (155.0 bits), Expect = 5.0e-62, Sum P(2) = 5.0e-62
Identities = 97/372 (26%), Positives = 187/372 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSS 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQA 493
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 494 TG-VSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 265 (98.3 bits), Expect = 5.0e-62, Sum P(2) = 5.0e-62
Identities = 70/182 (38%), Positives = 105/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E+ I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 430 (156.4 bits), Expect = 5.6e-62, Sum P(2) = 5.6e-62
Identities = 97/372 (26%), Positives = 186/372 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 199 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVIHCLDKSTEEP 258
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 259 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSS 318
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 319 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 378
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 379 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYK 432
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 433 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLTS 492
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + + +L G WP + ++P +F +FY + +GR+L+
Sbjct: 493 TG-VSLGGVDLIVRVLTTGYWPT-QSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQ 550
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 551 HHMGSADLNATF 562
Score = 258 (95.9 bits), Expect = 5.6e-62, Sum P(2) = 5.6e-62
Identities = 66/182 (36%), Positives = 103/182 (56%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 586 RKHILQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 644
Query: 493 N--KEELTEDTEIRLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+E+ +N + ++ R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 645 EPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 704
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q ++ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 705 IVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 764
Query: 608 VA 609
VA
Sbjct: 765 VA 766
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 426 (155.0 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 97/372 (26%), Positives = 187/372 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSS 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQA 493
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 494 TG-VSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 264 (98.0 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 70/182 (38%), Positives = 104/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 426 (155.0 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 96/372 (25%), Positives = 191/372 (51%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FL+MS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 198 VYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 257
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 258 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVPNGLKTMCECMSW 317
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 318 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 377
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 378 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYK 431
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F ++
Sbjct: 432 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRHH-LQ 490
Query: 365 TNEIDL-GIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T+++ L G+ ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 491 TSQVSLCGVDLTVRVLTTGYWPT-QSATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQ 549
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 550 HHMGSADLNATF 561
Score = 262 (97.3 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 67/182 (36%), Positives = 103/182 (56%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 586 RKHILQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 644
Query: 493 N--KEELTEDTEIRLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+E+ +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 645 EPKSKEIESGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 704
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q ++ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 705 IVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 764
Query: 608 VA 609
VA
Sbjct: 765 VA 766
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 423 (154.0 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 97/372 (26%), Positives = 187/372 (50%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DLA MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSC 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F++E F+ D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQA 493
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 494 TG-VSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 264 (98.0 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 70/182 (38%), Positives = 104/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 165/562 (29%), Positives = 282/562 (50%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y + FE+ LE S +Y AS+ Q + YM + + L E R +LH ++ PK+
Sbjct: 189 YEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTEPKL 248
Query: 130 KAKCEQHM-VADHLNFLQGE---CVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDH 185
AK + + V ++ E C ++ +++ DLA MY L + +G++ + D + H
Sbjct: 249 VAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQH 308
Query: 186 IC-------KQGLEAIS----GLSGDNISTQ-FVENMLAVHKKYKAFVKELFSGDQSFMG 233
I KQ EA + SG + Q + ++ +H K+ +V E F F
Sbjct: 309 ITVEGSALIKQATEAATDKAASTSGLKVQDQVLIRQLIDLHDKFMVYVDECFQKHSLFHK 368
Query: 234 ALDKACSSVINHKFDPKMPSKSPEYLAKYCD-MXXXXXXXXXXESE-MDDKLSQSITVFK 291
AL +A N S E LA YCD + E+E ++ L + + +
Sbjct: 369 ALKEAFEVFCNKTV---AGVSSAEILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLV 425
Query: 292 YIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKIS 351
YI DKD+F +F+ K A+RL+ ++ + E +++ K K+ G +FT+K MLTD+ ++
Sbjct: 426 YISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLA 485
Query: 352 GGLNEKFHSEFVKTNEID-LGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKF 410
F EF+ N+ LG+ F++ +L G WP T + ++P E+ C+ F+ +
Sbjct: 486 KEHQTNF-VEFLSVNKTKKLGMDFTVTVLTTGFWPSYKT--TDLNLPIEMVNCVEAFKAY 542
Query: 411 YHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVL 470
Y + N R+LSW++++ +L + K+ + + T+Q A+LLLF + ++ +I L
Sbjct: 543 YGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQL 602
Query: 471 SLSQDQIGR--HIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQ 528
+L + + R H S ++ K+L KE ++ + +N+K T V
Sbjct: 603 NLGHEDLARLLHSLSCLKYKILI--KEPMSRNISNTDTFEFNSKFTDKMRRIRVPLPPMD 660
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIE 587
E ++ V VD+DR+ + AA+VRIMKSRK + H L+ E + SK F P I MIKK IE
Sbjct: 661 ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSKMFKPDIKMIKKRIE 720
Query: 588 SLIDKNYVERTANSTDEYSYVA 609
LI ++Y+ER ++ + + Y+A
Sbjct: 721 DLISRDYLERDTDNPNTFKYLA 742
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 598 (215.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 158/563 (28%), Positives = 293/563 (52%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+YV+ FE FLE + E+Y E++ L + NV YM++ + EE +RS +L +
Sbjct: 212 IYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKP 271
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ ++ H N + + + ++ + + + MY LL V++ ++ L + + +I K
Sbjct: 272 LLEVLNAALIEKHANEMYDQFLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLELYIKK 331
Query: 189 QGLEAISGLS--GDNISTQ--------FVENMLAVHKKYKAFVKELFSGDQSFMGALDKA 238
+ A+ + +N + +V +++++ ++ V FS D F+ +LD A
Sbjct: 332 EAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNA 391
Query: 239 CSSVINHKF----DPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMD-DKLSQSITVFKYI 293
C +N+ P+ P ++PE LA+Y D ++EM+ D L + VFK+I
Sbjct: 392 CRHFVNNNPIATPKPRSPCRTPELLARYAD---GFLKSNSKDNEMNADNL---MIVFKFI 445
Query: 294 DDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGG 353
++D F + Y ++LAKRL++ S S + EE++I++L++ E+T+K +M TDIK S
Sbjct: 446 AERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKASDD 505
Query: 354 LNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTV-ISSFSVPQELEKCIHMFEKFYH 412
L KF + +++ FS +L +WP + + + EL+ I F+ Y
Sbjct: 506 LKIKFK------DGMNVLFDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYL 559
Query: 413 GQFNGRKLSWLHNISQVELKLSYLK----RPYFVTMQTFQMAILLLFEKNDAMTCGDIQT 468
Q G+++ WL N + ELK K +P+ + Q+ +LL + + T D+
Sbjct: 560 QQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVK 619
Query: 469 VLSLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQ 528
++ + ++ + H+ V+ KLL KEE D + ++ Y +K+ K+ GA+ K +
Sbjct: 620 IVGIKKELLQNHVTPFVKYKLL---KEE--GDQLVIVD-HYPSKKNKVSFIGAITKTKEE 673
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-F-APSISMIKKCI 586
++E V + R ++L+A+IVRIMKS+K + N L+ EV+ Q+ + F A +I +K+ I
Sbjct: 674 DVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNID-VKRAI 732
Query: 587 ESLIDKNYVERTANSTDEYSYVA 609
+SLIDK Y++R D+Y Y++
Sbjct: 733 DSLIDKEYLKRNG---DDYEYIS 752
Score = 45 (20.9 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 2 SLKPKQVDFNKTWGSLQ---ETIQGVITLGNVRRATWNDRFSDIYSLCV 47
S P D N TW +Q E I G V + + ++ +Y+ CV
Sbjct: 3 STLPPFSDLNATWTFIQPGLEYILGAHGEQGVTATVYMNCYTAVYNYCV 51
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 598 (215.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 158/563 (28%), Positives = 293/563 (52%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+YV+ FE FLE + E+Y E++ L + NV YM++ + EE +RS +L +
Sbjct: 212 IYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKP 271
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICK 188
+ ++ H N + + + ++ + + + MY LL V++ ++ L + + +I K
Sbjct: 272 LLEVLNAALIEKHANEMYDQFLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLELYIKK 331
Query: 189 QGLEAISGLS--GDNISTQ--------FVENMLAVHKKYKAFVKELFSGDQSFMGALDKA 238
+ A+ + +N + +V +++++ ++ V FS D F+ +LD A
Sbjct: 332 EAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKSLDNA 391
Query: 239 CSSVINHKF----DPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMD-DKLSQSITVFKYI 293
C +N+ P+ P ++PE LA+Y D ++EM+ D L + VFK+I
Sbjct: 392 CRHFVNNNPIATPKPRSPCRTPELLARYAD---GFLKSNSKDNEMNADNL---MIVFKFI 445
Query: 294 DDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGG 353
++D F + Y ++LAKRL++ S S + EE++I++L++ E+T+K +M TDIK S
Sbjct: 446 AERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKASDD 505
Query: 354 LNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTV-ISSFSVPQELEKCIHMFEKFYH 412
L KF + +++ FS +L +WP + + + EL+ I F+ Y
Sbjct: 506 LKIKFK------DGMNVLFDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKAMYL 559
Query: 413 GQFNGRKLSWLHNISQVELKLSYLK----RPYFVTMQTFQMAILLLFEKNDAMTCGDIQT 468
Q G+++ WL N + ELK K +P+ + Q+ +LL + + T D+
Sbjct: 560 QQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDDLVK 619
Query: 469 VLSLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQ 528
++ + ++ + H+ V+ KLL KEE D + ++ Y +K+ K+ GA+ K +
Sbjct: 620 IVGIKKELLQNHVTPFVKYKLL---KEE--GDQLVIVD-HYPSKKNKVSFIGAITKTKEE 673
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-F-APSISMIKKCI 586
++E V + R ++L+A+IVRIMKS+K + N L+ EV+ Q+ + F A +I +K+ I
Sbjct: 674 DVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNID-VKRAI 732
Query: 587 ESLIDKNYVERTANSTDEYSYVA 609
+SLIDK Y++R D+Y Y++
Sbjct: 733 DSLIDKEYLKRNG---DDYEYIS 752
Score = 45 (20.9 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 2 SLKPKQVDFNKTWGSLQ---ETIQGVITLGNVRRATWNDRFSDIYSLCV 47
S P D N TW +Q E I G V + + ++ +Y+ CV
Sbjct: 3 STLPPFSDLNATWTFIQPGLEYILGAHGEQGVTATVYMNCYTAVYNYCV 51
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 419 (152.6 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 96/372 (25%), Positives = 185/372 (49%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE FLEMS E+++ E+ K L + S Y+++V ++EE R + L S+
Sbjct: 200 VYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEP 259
Query: 129 VKAKCEQHMVADHLNFL----QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ E+ +++ H+ + V M+ + DL MY L V G+ + + +
Sbjct: 260 IVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSS 319
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
++ +QG +S +++ +L + ++ F+ E F+ D+ F + +N
Sbjct: 320 YLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLN 379
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ S+SPEYL+ + D E E++ L +++ +F+++ +KDVF ++Y
Sbjct: 380 ------LNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYK 433
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
+ LA+RL+ +S S D E+ MI+KLK CG +FT+K M D+ IS ++F
Sbjct: 434 QHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQA 493
Query: 365 TNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWL 423
T + LG + ++ +L G WP + ++P +F +FY + +GR+L+
Sbjct: 494 TG-VSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 551
Query: 424 HNISQVELKLSY 435
H++ +L ++
Sbjct: 552 HHMGSADLNATF 563
Score = 265 (98.3 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 70/182 (38%), Positives = 105/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 646
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E+ I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 647 EPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 706
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 707 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 766
Query: 608 VA 609
VA
Sbjct: 767 VA 768
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 342 (125.4 bits), Expect = 4.0e-59, Sum P(3) = 4.0e-59
Identities = 79/257 (30%), Positives = 137/257 (53%)
Query: 357 KFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFN 416
K E+++ + I ++NIL G WP V +P E+ K +F+ FY G+ +
Sbjct: 501 KLKHEYMQNQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVKLQEIFKTFYLGKHS 558
Query: 417 GRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQ 476
GRKL W + LK + + + + FQ +LL+F + + + +I+ + +
Sbjct: 559 GRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGE 618
Query: 477 IGRHIASLV--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIER 532
+ R + SL + ++L N + ++ + + N + +K ++KI+ KET +E
Sbjct: 619 LRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQAS 678
Query: 533 TVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDK 592
T V +DR+ + AAIVRIMK RK + HN L+ EV +Q K F + +KK IESLID+
Sbjct: 679 TTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVKPADLKKRIESLIDR 737
Query: 593 NYVERTANSTDEYSYVA 609
+Y+ER + ++Y+Y+A
Sbjct: 738 DYMERDKENPNQYNYIA 754
Score = 324 (119.1 bits), Expect = 4.0e-59, Sum P(3) = 4.0e-59
Identities = 80/266 (30%), Positives = 135/266 (50%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FL+ + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 246 DLQIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 305
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 306 QKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIE 365
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 366 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFIN 422
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 423 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 477
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLK 330
K LAKRL+ +S S+D E++M++KLK
Sbjct: 478 KDLAKRLLVGKSASVDAEKSMLSKLK 503
Score = 57 (25.1 bits), Expect = 4.0e-59, Sum P(3) = 4.0e-59
Identities = 17/79 (21%), Positives = 40/79 (50%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 74 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 129
Query: 62 KLFLDQHLYVDI--FETQF 78
+ + H+ I F+T F
Sbjct: 130 RQICEDHIKAQIHQFKTGF 148
Score = 46 (21.3 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 29/138 (21%), Positives = 60/138 (43%)
Query: 85 WYK-SEASKLLQTCNVSQY-MERVLQVLHEETNRSVRFLHVSSYPKVKAKCEQHMVADHL 142
W K EA + +Q +Y +E + Q + E S + + + Y +++ CE H+ A
Sbjct: 86 WQKLKEAVEAIQNSTSIKYNLEELYQAV--ENLCSYK-ISANLYKQLRQICEDHIKAQIH 142
Query: 143 NFLQG--ECVPMVAEERR--HDLANMYPLLRSV---REGINILIDAVRDHICKQGLEAIS 195
F G + V + + R + ++RS+ + +L +++ I GLE
Sbjct: 143 QFKTGFKDTVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFR 202
Query: 196 G--LSGDNISTQFVENML 211
+S + T+ ++ +L
Sbjct: 203 AHIISDQKVQTKTIDGIL 220
Score = 43 (20.2 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 320 DGEEAMINKLKQACGYE 336
+GEE + ++KQA G E
Sbjct: 599 EGEEFSLEEIKQATGIE 615
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 378 (138.1 bits), Expect = 5.9e-57, Sum P(2) = 5.9e-57
Identities = 88/352 (25%), Positives = 173/352 (49%)
Query: 89 EASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKVKAKCEQHMVADHLNFL--- 145
E+ K L + S Y+++V ++EE R + L S+ + E+ +++ H+ +
Sbjct: 2 ESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEM 61
Query: 146 -QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQGLEAISGLSGDNIST 204
V M+ + DLA MY L V G+ + + + ++ +QG +S
Sbjct: 62 ENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPV 121
Query: 205 QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDPKMPSKSPEYLAKYCD 264
+++ +L + ++ F++E F+ D+ F + +N + S+SPEYL+ + D
Sbjct: 122 DYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN------LNSRSPEYLSLFID 175
Query: 265 MXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEA 324
E E++ L +++ +F+++ +KDVF ++Y + LA+RL+ +S S D E+
Sbjct: 176 DKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKN 235
Query: 325 MINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLG-IHFSINILQAGS 383
MI+KLK CG +FT+K M D+ IS ++F T + LG + ++ +L G
Sbjct: 236 MISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATG-VSLGGVDLTVRVLTTGY 294
Query: 384 WPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSY 435
WP + ++P +F +FY + +GR+L+ H++ +L ++
Sbjct: 295 WPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 263 (97.6 bits), Expect = 5.9e-57, Sum P(2) = 5.9e-57
Identities = 68/182 (37%), Positives = 103/182 (56%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 370 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 428
Query: 493 N--KEELTEDTEIRLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
+E+ +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 429 EPKSKEIKNGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 488
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 489 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 548
Query: 608 VA 609
VA
Sbjct: 549 VA 550
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 551 (199.0 bits), Expect = 4.9e-56, Sum P(2) = 4.9e-56
Identities = 160/572 (27%), Positives = 279/572 (48%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
LY +F +FL + +Y+ E+S ++ V +Y+++ + EE RS +L
Sbjct: 223 LYDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASP 282
Query: 129 VKAKCEQHMVADHLN-FLQGECV---PMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ + E +++ HL+ L+ + M+ L +Y V G+ L +
Sbjct: 283 LLSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAK 342
Query: 185 HICKQG----------LE---AISGLSGD-NISTQFVENMLAVHKKYKAFVKELFSGDQS 230
++ G LE A+ LS + ++T +V+ +LA+ + + D+S
Sbjct: 343 YVAHHGKLINETTSQALEGKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADRS 402
Query: 231 FMGALDKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVF 290
+ +L A + ++ +++PEY++ + D E ++ L S+T+F
Sbjct: 403 ILNSLSDAFVTFVDGY------TRAPEYISLFIDDNLKKDARKAIEGSIEATLQNSVTLF 456
Query: 291 KYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKI 350
++I +KDVF K+Y LAKRL++ +S S D E MI++LKQ G FT K M D+ +
Sbjct: 457 RFISEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNL 516
Query: 351 SGGLNEKF-HSEFVKTNEIDLGIHFSINILQAGSWP--LGPTVISSFSVPQELEKCIHMF 407
S L +++ H+ +++ + L ++ ++IL + WP L P I + P+ L I F
Sbjct: 517 SQELLQEYKHNSALQSAKPALDLN--VSILASTFWPIDLSPHKIKC-NFPKVLLAQIDQF 573
Query: 408 EKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQ 467
FY + GRKL W ++ ++++++ R Y + + T ILLLF+ C +
Sbjct: 574 TDFYLSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFE 633
Query: 468 TVLSLSQDQIG---RHIASLVECK---LLTSNK-EELTEDTEIRLNLGYNNKRTKLKISG 520
+L + ++G R++ SL K LL K E+ + N + + ++KIS
Sbjct: 634 EILEKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKIST 693
Query: 521 AVQK--ETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAP 577
Q E E +RT+ VDE RK A IVR+MK RK HN L+ EV Q + F P
Sbjct: 694 VAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHP 753
Query: 578 SISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
S MIK+ IE+LI++ Y++R A++ Y Y+A
Sbjct: 754 SPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
Score = 45 (20.9 bits), Expect = 4.9e-56, Sum P(2) = 4.9e-56
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 7 QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV-AYPEPLADRLYQETKLFL 65
QVDF W LQ I G I + + ++ + + + Y L + Y E L + + + L
Sbjct: 19 QVDFATHWEVLQRAI-GDIFQKSTSQLSFEELYRNAYILVLHKYGEKLYNHVQDVIRSRL 77
Query: 66 DQHLYVDIFETQFLEMSG 83
+ I++ + G
Sbjct: 78 KEETVPAIYKNYDASLLG 95
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 372 (136.0 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 99/384 (25%), Positives = 183/384 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCN-VSQYMERVLQVLHEETNRSVRFLHVSSYP 127
+Y D FE L+ + ++Y+ L N Y+ +V +H+E +R+ R+L +
Sbjct: 198 VYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTEA 257
Query: 128 KVKAKCEQHMVADHLN---FLQGECVPMVAEERR-HDLANMYPLLRSVRE-------GIN 176
K+ + MVA+H+ ++Q V + E ++ DL ++ + + + + G+
Sbjct: 258 KILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLK 317
Query: 177 ILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALD 236
L+ AV +++ + G + FV +L + + + + F+ D+ F
Sbjct: 318 ALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTTAFADDRDFKNRFQ 377
Query: 237 KACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDK 296
+ +N +SPE++A Y D ++EMD+KL + +F+Y+ +K
Sbjct: 378 HDFETFLNSN------RQSPEFVALYMDDMLRSGLKCVSDAEMDNKLDNVMILFRYLQEK 431
Query: 297 DVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNE 356
DVF K++ + LAKRL+ +S S D E+A++ KLK CG +FT K M D ++ L
Sbjct: 432 DVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLAT 491
Query: 357 KFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTV-ISSFSVPQELEKCIHMFEKFYHGQF 415
F ++ + + I S+ +L AG WP TV + +PQEL MF ++Y +
Sbjct: 492 SFR-DWREAQPTKMSIDISLRVLTAGVWP---TVQCNPVVLPQELSVAYEMFTQYYTEKH 547
Query: 416 NGRKLSWLHNISQVELKLSYLKRP 439
GRKL+ + ++K ++ P
Sbjct: 548 TGRKLTINTLLGNADVKATFYPPP 571
Score = 248 (92.4 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 61/175 (34%), Positives = 100/175 (57%)
Query: 444 MQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECK-----LLTSNK--EE 496
+ T QM ILL F ++ ++C + L + + ++ R++ SL K L+ NK +
Sbjct: 603 VNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDA 662
Query: 497 LTEDTEIRLNLGYNNKRTKLKISGAVQK-ETPQEIERTVSSVDEDRKLYLQAAIVRIMKS 555
+ E +N + +K T++K+ K E+ EI T V++DRKL ++AAIVRIMK+
Sbjct: 663 IDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKA 722
Query: 556 RKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
RK++ HN L+ EV Q + F PS +IK+ IE+LI++ Y+ R + Y Y+A
Sbjct: 723 RKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
Score = 56 (24.8 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 22/102 (21%), Positives = 45/102 (44%)
Query: 12 KTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLY- 70
+TW L+ IQ + N ++ + + + Y++ V + +RLY K + H+
Sbjct: 29 QTWELLKRAIQEIQRKNN-SGLSFEELYRNAYTM-VLHKH--GERLYNGLKDVIQDHMAS 84
Query: 71 --VDIFETQ----FLEMSGEWYKSEASKLLQTCNVSQYMERV 106
+ I E+ FLE E + ++ ++ YM+R+
Sbjct: 85 VRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRI 126
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 372 (136.0 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 99/384 (25%), Positives = 183/384 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCN-VSQYMERVLQVLHEETNRSVRFLHVSSYP 127
+Y D FE L+ + ++Y+ L N Y+ +V +H+E +R+ R+L +
Sbjct: 198 VYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFYLAQVEIAMHDEASRASRYLDKMTEA 257
Query: 128 KVKAKCEQHMVADHLN---FLQGECVPMVAEERR-HDLANMYPLLRSVRE-------GIN 176
K+ + MVA+H+ ++Q V + E ++ DL ++ + + + + G+
Sbjct: 258 KILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLK 317
Query: 177 ILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALD 236
L+ AV +++ + G + FV +L + + + + F+ D+ F
Sbjct: 318 ALLKAVSEYLNETGSNIVKNEDLLKNPVNFVNELLQLKDYFSSLLTTAFADDRDFKNRFQ 377
Query: 237 KACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDK 296
+ +N +SPE++A Y D ++EMD+KL + +F+Y+ +K
Sbjct: 378 HDFETFLNSN------RQSPEFVALYMDDMLRSGLKCVSDAEMDNKLDNVMILFRYLQEK 431
Query: 297 DVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNE 356
DVF K++ + LAKRL+ +S S D E+A++ KLK CG +FT K M D ++ L
Sbjct: 432 DVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLAT 491
Query: 357 KFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTV-ISSFSVPQELEKCIHMFEKFYHGQF 415
F ++ + + I S+ +L AG WP TV + +PQEL MF ++Y +
Sbjct: 492 SFR-DWREAQPTKMSIDISLRVLTAGVWP---TVQCNPVVLPQELSVAYEMFTQYYTEKH 547
Query: 416 NGRKLSWLHNISQVELKLSYLKRP 439
GRKL+ + ++K ++ P
Sbjct: 548 TGRKLTINTLLGNADVKATFYPPP 571
Score = 248 (92.4 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 61/175 (34%), Positives = 100/175 (57%)
Query: 444 MQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECK-----LLTSNK--EE 496
+ T QM ILL F ++ ++C + L + + ++ R++ SL K L+ NK +
Sbjct: 603 VNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDA 662
Query: 497 LTEDTEIRLNLGYNNKRTKLKISGAVQK-ETPQEIERTVSSVDEDRKLYLQAAIVRIMKS 555
+ E +N + +K T++K+ K E+ EI T V++DRKL ++AAIVRIMK+
Sbjct: 663 IDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKA 722
Query: 556 RKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
RK++ HN L+ EV Q + F PS +IK+ IE+LI++ Y+ R + Y Y+A
Sbjct: 723 RKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
Score = 56 (24.8 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 22/102 (21%), Positives = 45/102 (44%)
Query: 12 KTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLY- 70
+TW L+ IQ + N ++ + + + Y++ V + +RLY K + H+
Sbjct: 29 QTWELLKRAIQEIQRKNN-SGLSFEELYRNAYTM-VLHKH--GERLYNGLKDVIQDHMAS 84
Query: 71 --VDIFETQ----FLEMSGEWYKSEASKLLQTCNVSQYMERV 106
+ I E+ FLE E + ++ ++ YM+R+
Sbjct: 85 VRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRI 126
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 155/557 (27%), Positives = 267/557 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE+ L+ + +Y +AS+ Q + YM + + L E R +LH ++ PK
Sbjct: 196 IYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHSTTEPK 255
Query: 129 VKAKCEQHM-VADHLNFLQGE---CVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ K + + V ++ E C+ ++ +++ DL+ MY L R + +G+ + D +
Sbjct: 256 LVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIADLFKQ 315
Query: 185 HICKQGLEAI-----SGLSGDNISTQ-FVENMLAVHKKYKAFVKELFSGDQSFMGALDKA 238
H+ +G I + + D ++Q V + +H KY +V E F F L +A
Sbjct: 316 HVTAEGNALIKQAADAATNQDASASQVLVRKEIELHDKYMVYVDECFQKHSLFHKLLKEA 375
Query: 239 CSSVINHKFDPKMPSKSPEYLAKYCD--MXXXXXXXXXXESEMDDKLSQSITVFKYIDDK 296
N + S E LA YCD + + + L + + + YI DK
Sbjct: 376 FEVFCNKTV---AGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLLVYISDK 432
Query: 297 DVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNE 356
D+F +FY K A+RL+ +S M K+ +TDI ++ L
Sbjct: 433 DLFAEFYRKKQARRLLFDRSGIM----------KE-------------VTDITLARELQT 469
Query: 357 KFHSEFVKTN-EIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQF 415
F +++ N LGI F++ +L G WP T + ++P E+ C+ F+ FY +
Sbjct: 470 NF-VDYLSANMTTKLGIDFTVTVLTTGFWPSYKT--TDLNLPTEMVNCVEAFKVFYGTKT 526
Query: 416 NGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQD 475
N R+LSW++++ + + K+ + + T+Q A+LLLF + ++ +I L+LS +
Sbjct: 527 NSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEISEQLNLSHE 586
Query: 476 QIGR--HIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERT 533
+ R H S ++ K+L KE ++ +N+K T V E ++
Sbjct: 587 DLVRLLHSLSCLKYKILI--KEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPPMDERKKV 644
Query: 534 VSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDK 592
V VD+DR+ + AA+VRIMKSRK + H L+ E + SK F P I MIKK IE LI++
Sbjct: 645 VEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKRIEDLINR 704
Query: 593 NYVERTANSTDEYSYVA 609
+Y+ER + + + YVA
Sbjct: 705 DYLERDTENANTFKYVA 721
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 331 (121.6 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 89/299 (29%), Positives = 155/299 (51%)
Query: 205 QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDPKMPSKSPEYLAKYCD 264
++V+++LA+ KK+ K+ F DQ A+ + SS +N P +S E+L+ + D
Sbjct: 399 KWVDDILALKKKFDGIWKDAFGSDQVLQSAITASFSSFLN-----STP-RSSEFLSLFFD 452
Query: 265 MXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEA 324
++E+D L IT+ +YI DKD F +Y K L++RL+ ++S SMD E
Sbjct: 453 ENLKKGVKGKTDNEVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQ 512
Query: 325 MINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTN-EIDLG-IHFSINILQAG 382
MI+K+K G +FT + M D+ IS L + +FV+ + D IN+L +
Sbjct: 513 MISKMKMEVGNQFTQRLEAMFRDMTISEDLTASY-KQFVREQGDPDKKRFELDINVLTST 571
Query: 383 SWPLGPTVISSFS---------VPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKL 433
WP+ ++SS +P+E+E FEKFY + +GRKLSW ++ ++K
Sbjct: 572 MWPM--EIMSSSRDGQVELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKA 629
Query: 434 SYLK-----RPYFVTMQTFQMAILLLFEK---NDAMTCGDIQTVLSLSQDQIGRHIASL 484
++ + + + + + T+ M ILLLF +++T +IQ + + + R++ SL
Sbjct: 630 TFHRSNGKVQRHELNVSTYAMFILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSL 688
Score = 221 (82.9 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 63/181 (34%), Positives = 98/181 (54%)
Query: 442 VTMQTFQMAILLLFEK---NDAMTCGDIQTVLSLSQDQIGRHIASL-VECKLLTSNKEEL 497
+ + T+ M ILLLF +++T +IQ + + + R++ SL V K K +
Sbjct: 643 LNVSTYAMFILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAPKTRVLKKVPM 702
Query: 498 TEDTEIRLNLGYNNKRT----KLKI---SGAVQK-ETPQEIERTVSSVDEDRKLYLQAAI 549
+ D + +NN K++I SG K E+ + + T ++ +R ++AAI
Sbjct: 703 SRDVKPTDKFYFNNDFQSPFMKVRIGVVSGGANKVESQDQRKETEEKMNNERGGSIEAAI 762
Query: 550 VRIMKSRKQIRHNALIQEVLSQ-SKSFAPSISMIKKCIESLIDKNYVERTANSTDEYSYV 608
VRIMK RK + H+ LI EVLSQ S F P ++M+K+ IESLID+ Y+ER + Y YV
Sbjct: 763 VRIMKQRKTLIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERVSEDPPTYGYV 822
Query: 609 A 609
A
Sbjct: 823 A 823
Score = 111 (44.1 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 53 LADRLYQETKLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHE 112
+ + LY+ LY+ FE +LE S +Y++E +LL+T + + + V + E
Sbjct: 213 MLEGLYETEAEEESSKLYLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAE 272
Query: 113 ETNRSVRFLHVSSYPKVKAKCEQHMVADHL----NFLQGECVPMVAEERRHD-LANMYPL 167
E R + + S K+K + ++ ++L NF +G V ++ + R D L+ +Y L
Sbjct: 273 EKERCQYTISLLSESKIKEIVDNELIRNNLAEVVNF-EGTGVRVMLDHDRIDNLSKIYAL 331
Query: 168 LRSVREGINILIDAVRDHICKQGLE 192
V L AV+ I + G E
Sbjct: 332 SARVDPKKTHLTAAVQKRIVEMGNE 356
Score = 37 (18.1 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 414 QFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLF 455
Q + W+ +I ++ K + + F + Q Q AI F
Sbjct: 392 QVTSSAIKWVDDILALKKKFDGIWKDAFGSDQVLQSAITASF 433
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 149/565 (26%), Positives = 267/565 (47%)
Query: 55 DRLY-QETKLFLDQ-HLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHE 112
D Y Q+ L L + +Y +F +L M +Y +E+S+ +Q + +Y+E + L
Sbjct: 182 DHAYLQDAMLMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQELPLEEYLEYAMSSLER 241
Query: 113 ETNRSVRFLHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVR 172
E +F V ++ ++ ++ HL+ L + + H +Y LL+
Sbjct: 242 EDAYVEKFDIVRDKKSIRETVQRCLITSHLDTLTKGISQFIEKRDAHSCKLLYALLQFNH 301
Query: 173 EGINILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFM 232
E LI D + G + ++ S D+ V+ +L+ HK + V E F D++
Sbjct: 302 E-TEYLIQPWSDCLVDVGFKLVNDESKDDT---LVQELLSFHKFLQVVVDESFLHDETLS 357
Query: 233 GALDKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKY 292
A+ KA + IN + + + +AKY D + + S+ + +F+Y
Sbjct: 358 YAMRKAFETFINGAKGSQREAPA-RLIAKYIDYLLRVGEQASGGKPLKEVFSEILDLFRY 416
Query: 293 IDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISG 352
I KD+F +Y +AKRL+ +S S E +++ LK+ CG +FT+ M D+ IS
Sbjct: 417 IASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISK 476
Query: 353 GLNEKF-HSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFY 411
F HS+ DL +N+L WP P S +P ++++ + FEKFY
Sbjct: 477 EFTSSFRHSKAAHNLHRDL----YVNVLSQAYWPSYPE--SHIRLPDDMQQDLDCFEKFY 530
Query: 412 HGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEK---NDAMTCGDIQT 468
+ G+K+SW ++ +K + +++ FQ +LL F + ++ D++
Sbjct: 531 LSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQDLKK 590
Query: 469 VLSLSQDQIGRHIASL----VECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQK 524
LS + R + SL + ++ ++ + DT +N + +K ++KI+ K
Sbjct: 591 STELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYLK 650
Query: 525 ETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFA-PSISMIK 583
E QE V DR+ LQA+IVR+MK +++++H+ L+Q V++ K P +S +K
Sbjct: 651 EERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVK 710
Query: 584 KCIESLIDKNYVERTANSTDEYSYV 608
IE L++K Y+ER N D Y+YV
Sbjct: 711 TAIEKLLEKEYLEREDN--DIYTYV 733
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 431 (156.8 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
Identities = 123/409 (30%), Positives = 197/409 (48%)
Query: 102 YMERVLQVLHEETNRSVRFLHVSSYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDL 161
Y ++ L+ + R + +S K K +V + + EC ++A + L
Sbjct: 218 YADKKLEEEQQRAKRYLEMNSPTS-GKHMEKAVIALVESFEDTILAECSKLIASKDVERL 276
Query: 162 ANMYPLLRSVREGINILIDAVRDHICKQGLEAI----SGLSGDNISTQFVENMLAVHKKY 217
+Y L+R R GI+ ++ + HI +GL + LS D ++V+ +L + K+
Sbjct: 277 QRLYRLIRRTRSGIDTVLKCIDTHIRTEGLNDMRNNAENLSTD--PERYVQQLLLMFDKF 334
Query: 218 KAFVKELFSGDQSFMGALDKACSSVINHK--FDPKM----------PSKSPEYLAKYCDM 265
+ V+E F D + A DKA +V+N F +M SK E LA YCD+
Sbjct: 335 SSLVREGFCDDARLLTARDKAFRAVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDL 394
Query: 266 XXXXXXXXX--XESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEE 323
E+D+KL+Q + V KY+++KDVF +F+ L++RLI + S + EE
Sbjct: 395 LLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEE 454
Query: 324 AMINKLKQACGY--EFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSIN--IL 379
M+ KL++ CG + NK RML DI+++ +N F TN + I SIN +L
Sbjct: 455 MMVTKLRE-CGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNN-NKSIADSINMKVL 512
Query: 380 QAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRP 439
G+W G + FS+P+ELE + E FY Q NGRKL W+H+ S +
Sbjct: 513 NGGAWGRGGSERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGG 572
Query: 440 YF-VTMQTFQMAILLLFEK--NDAMTCGDIQTVLSLSQDQIGRHIASLV 485
F + TFQMA+L F +D ++ ++ L ++ R + SLV
Sbjct: 573 RFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLV 621
Score = 226 (84.6 bits), Expect = 7.1e-25, Sum P(3) = 7.1e-25
Identities = 65/215 (30%), Positives = 107/215 (49%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y FE QF+E + E+YK LL V +YM + L EE R+ R+L ++S P
Sbjct: 182 VYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNS-PT 240
Query: 129 VKAKCEQHMVADHLNF---LQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDH 185
E+ ++A +F + EC ++A + L +Y L+R R GI+ ++ + H
Sbjct: 241 SGKHMEKAVIALVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTH 300
Query: 186 ICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSV 242
I +GL + + +N+ST ++V+ +L + K+ + V+E F D + A DKA +V
Sbjct: 301 IRTEGLNDMRN-NAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFRAV 359
Query: 243 INHK--FDPKM----------PSKSPEYLAKYCDM 265
+N F +M SK E LA YCD+
Sbjct: 360 VNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDL 394
Score = 131 (51.2 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 467 QTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYN-------NKRTKLKIS 519
+T+LSL R+ L + T + T+ T+ +N +N +R K+ +
Sbjct: 615 RTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLI 674
Query: 520 GAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPS 578
G +Q E+ S+ R+L +Q IV+I+K+RK L E++ K F P+
Sbjct: 675 GRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPN 734
Query: 579 ISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+IK+ I+ LI+ Y+ER A+ + + Y++
Sbjct: 735 RKIIKEQIDWLIENKYMERRADDINTFVYIS 765
Score = 52 (23.4 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 8 VDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSL 45
+ F++ W + ++ +V A W D F +Y +
Sbjct: 1 MQFDEEWSKADPIVHALLHQKSVTPAAWQDLFYHVYKI 38
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 123/438 (28%), Positives = 221/438 (50%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FL + Y +E +L+Q +V +Y+ V + L EE +R + +L S+
Sbjct: 208 DLQVYKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQST 267
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +H+ LQ ++ E R +L +Y L V+ G+ L+ + R+
Sbjct: 268 QKPLIATVEKQLLGEHMTTILQKGLRTLLDENRVCELTLLYELFSKVKGGLTALLQSWRE 327
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G E + D + V+ +L + + + F ++SF+ A+ +A + IN
Sbjct: 328 YIKSVGAETVCSPERDR---EMVQELLDFKDQMDSVTQSCFQRNESFINAMKEAFENFIN 384
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
+ P+K E +AKY D E E++ L + + +F++I KDVF FY
Sbjct: 385 QR-----PNKPAELIAKYVDSKLRAGNKEATEEELERILDKIMIIFRFIHGKDVFEAFYK 439
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVK 364
K LAKRL+ +S S+D E++M++KLK CG FT+K M D+++S + +F ++++
Sbjct: 440 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQ 498
Query: 365 TNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLH 424
I ++NIL G WP + +P E+ K +F+ FY G+ +GRKL W
Sbjct: 499 NQTEPSNIELTVNILTMGYWPSYTPM--DVHLPAEMVKLQEVFKLFYLGKHSGRKLQWQP 556
Query: 425 NISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASL 484
+ LK + + + + FQ +LL+F ++D + +I+ + + ++ R + SL
Sbjct: 557 TLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEEGELKRTLQSL 616
Query: 485 VECKLLTSNKEELTEDTE 502
K NK ++ E
Sbjct: 617 ACGKARVLNKTPRGKEVE 634
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 279 (103.3 bits), Expect = 8.0e-49, Sum P(4) = 8.0e-49
Identities = 76/239 (31%), Positives = 119/239 (49%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM +++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQVF-KEMHKHNKLA 520
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E FY +GRKL W H +S
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSN 579
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 580 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 638
Score = 202 (76.2 bits), Expect = 8.0e-49, Sum P(4) = 8.0e-49
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRDNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 257 SVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLMDKVPNGIEPMLKDLEE 316
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 317 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 375
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 376 VVNDATIFKLELPMK 390
Score = 127 (49.8 bits), Expect = 8.0e-49, Sum P(4) = 8.0e-49
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEI 741
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y++R + + Y+A
Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA 780
Score = 66 (28.3 bits), Expect = 8.0e-49, Sum P(4) = 8.0e-49
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV 47
LK K + F W ++ + ++ +V + W D+FSD++++C+
Sbjct: 7 LKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDQFSDVHAVCL 52
Score = 40 (19.1 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 62 KLFLDQHLYVDIF-ETQFLEMSGEW---------YKSEASKLLQTCNVSQYMERVLQVLH 111
K L + L +DI +++ E EW Y ++ +++ Q VS+ + +V + +H
Sbjct: 455 KAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQVFKEMH 514
Query: 112 E 112
+
Sbjct: 515 K 515
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 249 (92.7 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 205 QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDPKMPSKSPEYLAKYCD 264
++V ++L + K+ ++ F+ D + K S I H+F +S E+++ Y D
Sbjct: 396 KWVHDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFI-HQF-----GRSSEFVSLYID 449
Query: 265 MXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEA 324
+ E+ L +SI + +Y+ DKD+F ++Y K L +RL+H +++S + E+
Sbjct: 450 ENLKRGIRGKSDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQ 509
Query: 325 MINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLG---IHFSINILQA 381
+I ++ G FT+KF M DI IS L+ K+ ++D+ I +I++L +
Sbjct: 510 LITMMQLELGKHFTSKFEGMFKDITISEELSTKYGEHIRSLGDVDVHHKPIDLAISVLTS 569
Query: 382 GSWPL-------------GPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
SWP GP + + P E+++ F KFY +GR L+W+ +
Sbjct: 570 NSWPPDVMGRPAQVGRGDGPPAVDC-NYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGS 628
Query: 429 VELK 432
++K
Sbjct: 629 ADIK 632
Score = 242 (90.2 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 67/185 (36%), Positives = 102/185 (55%)
Query: 437 KRPYFVTMQTFQMAILLLF---EKNDAMTCGDIQTVLSLSQDQIGRHIASL-VECKLLTS 492
+R Y + + T+ M +L+LF E + ++ DIQ S+ + R +ASL + K
Sbjct: 648 ERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVL 707
Query: 493 NKEELTEDT----EIRLNLGYNNKRTKLK---ISGAVQKETPQEIERTVSSVDEDRKLYL 545
K+ T+ + N G+ +K K+K I+ + E +E +RT DE R+ +
Sbjct: 708 LKDPATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVEGDEERQRTEDKNDETRRHMI 767
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDE 604
AAIVRIMKSRK++ HNAL+ EV+ Q S F P ++MIK IE LI + Y+ER +S
Sbjct: 768 DAAIVRIMKSRKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLERLDDSG-- 825
Query: 605 YSYVA 609
Y Y+A
Sbjct: 826 YKYMA 830
Score = 139 (54.0 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 53 LADRLYQETKLFLD-QHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLH 111
+ + LY ET +D LY+ FE LE S +Y+SEA KLL+ + S ++ + + L
Sbjct: 210 MLEDLY-ETDEEMDADRLYLVRFEPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLL 268
Query: 112 EETNRSVRFLHVSSYPKVKAKCEQHMVADHLN-FLQGE---CVPMVAEERRHDLANMYPL 167
EE +R L S K+ E +++ HLN FL E M+ ++R DLA +Y L
Sbjct: 269 EEEDRCKTTLSTLSIEKMTRAVEAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQL 328
Query: 168 LRSVREGINILIDAVRDHICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKE 223
+ V ++L V + I G E LS + S EN A K +A ++
Sbjct: 329 VARVDPSKDLLKKGVLNRILALGAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQ 387
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 109/331 (32%), Positives = 186/331 (56%)
Query: 283 LSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFH 342
L + + +F++I KDVF FY K LAKRL+ +S S+D E++M++KLK CG FT+K
Sbjct: 2 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 61
Query: 343 RMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEK 402
M D+++S + +F ++++ + I ++NIL G WP V +P E+ K
Sbjct: 62 GMFKDMELSKDIMIQF-KQYMQNQNVPGNIELTVNILTMGYWPT--YVPMEVHLPPEMVK 118
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMT 462
+F+ FY G+ +GRKL W + LK + + + + FQ +LL+F + + +
Sbjct: 119 LQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFS 178
Query: 463 CGDIQTVLSLSQDQIGRHIASLV--ECKLLTSNKE--ELTEDTEIRLNLGYNNKRTKLKI 518
+I+ + ++ R + SL + ++L N + ++ + + N + +K ++KI
Sbjct: 179 LEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKI 238
Query: 519 SGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPS 578
+ KET +E T V +DR+ + AAIVRIMK RK + HN L+ EV +Q K F
Sbjct: 239 NQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLK-FPVK 297
Query: 579 ISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+ +KK IESLID++Y+ER + ++Y+Y+A
Sbjct: 298 PADLKKRIESLIDRDYMERDKENPNQYNYIA 328
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 478 (173.3 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 156/575 (27%), Positives = 271/575 (47%)
Query: 62 KLFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRF- 120
+LF +YV FE + S +++ A + T ++ Y+E +++ E NR +F
Sbjct: 316 ELFHSLDVYVSGFEPVLVSGSKDFFSLWAQQEA-TGYLASYVENSHRLIEREMNRCEQFS 374
Query: 121 LHVSSYPKVKAKCEQHMVADHLNFL--QGECVPMVAEERRHDLANMYPLLRSVREGINIL 178
+ ++ K+ +Q +V D + L Q + + ++ + L +Y LL G L
Sbjct: 375 FNRTTKQKLSESLDQTLVTDQESVLLSQKDVLGLLRIGNKIALGQLYTLLERRDLGAK-L 433
Query: 179 IDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKY-KAFVKELFSGD---QSFMGA 234
A +I ++G + S ++ + + + + ++F + G +SF
Sbjct: 434 KGAFSTYIVEEGTGIVFDESEADMVVRLLSFKKQLDDIWNESFRRNEGLGHALRESFESF 493
Query: 235 LDKACSSVINHKFDPKMPSKSPEYLAKYCDMX------------XXXXXXXXXESEMDDK 282
++K S D P K+ E +AKY D ++E++ +
Sbjct: 494 MNKGRKSDATGGTDN--P-KTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQ 550
Query: 283 LSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFH 342
L Q + +F+++ K VF FY LA+RL+ +S S D E++M+ +LK CG FT+
Sbjct: 551 LDQVLDLFRFVHGKAVFEAFYKNDLARRLLMGRSASDDAEKSMLARLKTECGSSFTHNLE 610
Query: 343 RMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEK 402
M D++++ ++S + + L + +++L A +WP P V +P E+
Sbjct: 611 SMFKDMEVARDEMSAYNS-IKRERQTPLPVDLHVSVLSASAWPTYPDV--QVRIPPEIAT 667
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEK---ND 459
I FEKFY ++NGRKL+W H ++ +L+ + + + +FQ +LLLF +
Sbjct: 668 AISDFEKFYDTKYNGRKLAWKHQLAHCQLRARFPNGNKELVVSSFQAIVLLLFNELPEGG 727
Query: 460 AMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDT----EIRLNLGYNNKRTK 515
+ IQ +LS ++ R + SL K +K+ D E N + + + +
Sbjct: 728 TLNYRQIQEATTLSDQELTRTLQSLACAKYRVLSKKPKGRDVSPTDEFSYNASFTDPKFR 787
Query: 516 LKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSF 575
+KI+ KET +E + T V DR QAAIVRIMKSRK I H L+ EV+ ++S
Sbjct: 788 IKINQIQLKETKEENKTTHERVAADRHYETQAAIVRIMKSRKTITHAELVAEVIKATRSR 847
Query: 576 AP-SISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+ IKK IE LI+K+Y+ER + Y YVA
Sbjct: 848 GVLEPADIKKNIEKLIEKDYMER--EDGNRYQYVA 880
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 450 (163.5 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 141/550 (25%), Positives = 255/550 (46%)
Query: 84 EWYKSEASKLLQTCNVSQYMERVLQVLHEETNR-SVRFLHVSSYPKVKAKCEQHMVADHL 142
E Y +E + N + YME ++ + V F S+ V+A ++ +
Sbjct: 308 EHYNNERIDKVPKMNCNDYMEYCEDQINRYSQLVKVNFDEPSALKDVQATVTNCLIQQAI 367
Query: 143 -NFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQGLEAISGLSGDN 201
L + ++ + D+ M+ L R G + + ++ K+G + I+ ++
Sbjct: 368 PEILTHDFDDLIDSDNISDIGRMFNLCRQCVGGEDEVRTQFSKYLKKRGEKLIATCPDED 427
Query: 202 ISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALD----KACSSVINHKFDPKMPSKSPE 257
+ V +LA KK V + +G SF A D + C S F K +S E
Sbjct: 428 L----VSELLAFKKK----VDFIMTG--SFKSANDPVKMRQCLSDAFESFVNKQVDRSAE 477
Query: 258 YLAKYCD-MXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQS 316
++K+ + ++ +D + ++I +F+Y+ KDVF +Y + LAKRL ++S
Sbjct: 478 LISKHFHTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERS 537
Query: 317 TSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSI 376
S+D E+ ++ KLK CG FT K M D+ S F+ N+ +F+
Sbjct: 538 ASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEHMNKEKA--NFTA 595
Query: 377 NILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSY- 435
++ WP T ++P+E+ + ++ FY Q R + W H ++ + S+
Sbjct: 596 RVITPEYWPTYDTY--EINIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFR 653
Query: 436 --LKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLV----ECKL 489
K+ TM +Q ILLLF K + T +I + + ++ +++ +L+ + K+
Sbjct: 654 PGCKKELIATM--YQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKV 711
Query: 490 LT------SNKEELT----EDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE 539
L S K+E T ++ + +N + KR +++I+ K +E + V+
Sbjct: 712 LQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNS 771
Query: 540 DRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTA 599
DR+ + AA+VRIMK+RKQ+ H L+ E+L Q + F S + IKK +ESLI++ Y+ R
Sbjct: 772 DRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLR-FPVSTADIKKRLESLIEREYISRDP 830
Query: 600 NSTDEYSYVA 609
Y+YVA
Sbjct: 831 EEASSYNYVA 840
Score = 42 (19.8 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 19/87 (21%), Positives = 38/87 (43%)
Query: 20 TIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETKLFLDQHLYVDIFETQFL 79
T++G+ + VR ++ +Y VA A L + L D E Q+L
Sbjct: 141 TLEGLFS--KVRSVCDKNQSKVLYDRLVAIVVQFAKSLKESLNAVEQVPLAEDNCE-QYL 197
Query: 80 EMSGEWYKSEASKLLQTCNVSQYMERV 106
E G+ +++ K+ N+ +++R+
Sbjct: 198 EKFGQIWQAYPVKINLIRNIFLHLDRI 224
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 465 (168.7 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 145/557 (26%), Positives = 273/557 (49%)
Query: 29 NVRRATWNDRFSDIYSL-CVAYPEPL-ADRLYQETKLFLDQHLYVDIFETQFLEMSGEWY 86
N+ R T + S +YS+ C + + D ++ K+ ++Y FE +F++ + +Y
Sbjct: 198 NLERKTID---SLLYSIRCEREGDEIDRDLIHSLVKMLSSLNIYTK-FEIEFIKETNRFY 253
Query: 87 KSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKVKAKCEQHMVADHLN-FL 145
E + + Y++ V + L++E R +R+L S+ ++ A ++ ++ H++ L
Sbjct: 254 DMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVIL 313
Query: 146 QGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDHICKQGLEAISGLSGDNISTQ 205
+ MV +R DL +Y LL SV E I + ++ + +I + G++ ++ +
Sbjct: 314 EKGFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIKESWQSYIKQTGIQMLNDKEKE---AT 369
Query: 206 FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVINHKFDPKMPSKSPEYLAKYCDM 265
++++L + + + FS ++ AL ++ IN K +K E +A++ D
Sbjct: 370 LIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTK-----QNKPAELVARFIDS 424
Query: 266 XXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAM 325
E E++ L++S+ +F+YI KDVF FY + L+KRL+ +STS+D E++M
Sbjct: 425 KLKVGGKRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSM 484
Query: 326 INKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWP 385
I+KLK CG FT K M DI++S + F + N I +I +L +G+WP
Sbjct: 485 ISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNF--KSIEMNIYVLTSGNWP 542
Query: 386 LGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQ 445
+ P + ++ +P+E + +F KFY + NG+ L W + +S LK ++++ +++
Sbjct: 543 IQPPIEAT--LPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVS 600
Query: 446 TFQMAILLLFEKNDAMTCG-----DIQTVLSLSQDQIGRHIASLVECK--LLTSNKEELT 498
FQ IL LF ND + G DIQ L+ ++ +++ SL K +L K +
Sbjct: 601 LFQTIILYLF--NDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTS 658
Query: 499 EDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDE-DRKLYLQAAIVRIMKSRK 557
+T N N T SG+ +T +DE D L+ ++ K
Sbjct: 659 SNTSS--NTSSN---TSSSASGSASGGASGGATKT-KVIDETDTFLFNSKFSSKLFK--- 709
Query: 558 QIRHNAL-IQEVLSQSK 573
I+ N++ IQE + +++
Sbjct: 710 -IKVNSIQIQETVEENQ 725
Score = 184 (69.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 44/119 (36%), Positives = 74/119 (62%)
Query: 492 SNKEELTEDTEIRL-NLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIV 550
+ K ++ ++T+ L N +++K K+K++ +ET +E ++T ++ DR+ + AAIV
Sbjct: 685 ATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIV 744
Query: 551 RIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
RIMK+RK + HN LI E++S K F P +KK IE LI+K Y+ R + Y+Y+A
Sbjct: 745 RIMKTRKTLAHNLLISELVSLLK-FQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
Score = 64 (27.6 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 24/125 (19%), Positives = 54/125 (43%)
Query: 5 PKQVDF--NKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQETK 62
PK D + +W L I I + T + + + +LC + + LA LY +
Sbjct: 60 PKTPDNYEDSSWNKLSSAITS-INMKQATTLTQEELYKMVENLC--FDKILASNLYNKIS 116
Query: 63 LFLDQHLYVDIFE---TQ------FLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEE 113
+ +++H+ + I T FL+ +K ++++ ++ Y++R + +
Sbjct: 117 VQIEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSN 176
Query: 114 TNRSV 118
T +S+
Sbjct: 177 TVKSI 181
Score = 42 (19.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 9/36 (25%), Positives = 23/36 (63%)
Query: 458 NDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSN 493
+ A+T +++ +L+Q+++ + + +L K+L SN
Sbjct: 75 SSAITSINMKQATTLTQEELYKMVENLCFDKILASN 110
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 294 (108.6 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 520
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 579
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 580 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 639
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 640 FPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLT-TER 698
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 699 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 753
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 754 KEQIEWLIEHKYI 766
Score = 198 (74.8 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 257 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEE 316
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 317 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 375
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 376 VVNDATIFKLELPLK 390
Score = 125 (49.1 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 492 SNKEELTEDTEIRLNLGYN-------NKRTKLKISGAVQKETPQEIERTVSSVDEDRKLY 544
++ ++ TE T +N ++ KR K+ + G +Q T + E + + R L
Sbjct: 655 NSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILR 714
Query: 545 LQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTD 603
Q AI++IMK RK+I + L E++ K+ F P MIK+ IE LI+ Y+ R +
Sbjct: 715 TQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADIN 774
Query: 604 EYSYVA 609
+ Y+A
Sbjct: 775 TFIYMA 780
Score = 67 (28.6 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
LK K + F W ++ + ++ +V + W D FSD++++C+ + + + +++Q
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL-WDDKGSSKIHQAL 65
Query: 62 K 62
K
Sbjct: 66 K 66
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 294 (108.6 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 520
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 579
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 580 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 639
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 640 FPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLT-TER 698
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 699 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 753
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 754 KEQIEWLIEHKYI 766
Score = 198 (74.8 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 257 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEE 316
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 317 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 375
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 376 VVNDATIFKLELPLK 390
Score = 125 (49.1 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 492 SNKEELTEDTEIRLNLGYN-------NKRTKLKISGAVQKETPQEIERTVSSVDEDRKLY 544
++ ++ TE T +N ++ KR K+ + G +Q T + E + + R L
Sbjct: 655 NSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILR 714
Query: 545 LQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTD 603
Q AI++IMK RK+I + L E++ K+ F P MIK+ IE LI+ Y+ R +
Sbjct: 715 TQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADIN 774
Query: 604 EYSYVA 609
+ Y+A
Sbjct: 775 TFIYMA 780
Score = 67 (28.6 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
LK K + F W ++ + ++ +V + W D FSD++++C+ + + + +++Q
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL-WDDKGSSKIHQAL 65
Query: 62 K 62
K
Sbjct: 66 K 66
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 293 (108.2 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 520
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 579
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 580 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 639
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 640 FPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLT-TER 698
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 699 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 753
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 754 KEQMEWLIEHRYI 766
Score = 200 (75.5 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 257 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEE 316
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 317 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 375
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 376 VVNDATIFKLELPLK 390
Score = 122 (48.0 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 492 SNKEELTEDTEIRLNLGYN-------NKRTKLKISGAVQKETPQEIERTVSSVDEDRKLY 544
++ ++ TE T +N ++ KR K+ + G +Q T + E + + R L
Sbjct: 655 NSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILR 714
Query: 545 LQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTD 603
Q AI++IMK RK+I + L E++ K+ F P MIK+ +E LI+ Y+ R +
Sbjct: 715 TQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADIN 774
Query: 604 EYSYVA 609
+ Y+A
Sbjct: 775 TFIYMA 780
Score = 66 (28.3 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
LK K + F W + + ++ +V + W D FSD++++C+ + + + +++Q
Sbjct: 7 LKNKGSLQFEDKWDFMHPIVLKLLRQESVTKQQWFDLFSDVHAVCL-WDDKGSSKIHQAL 65
Query: 62 K 62
K
Sbjct: 66 K 66
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 293 (108.2 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 520
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 579
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 580 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 639
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 640 FPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLT-TER 698
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 699 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 753
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 754 KEQIEWLIEHKYI 766
Score = 200 (75.5 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 257 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEE 316
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 317 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 375
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 376 VVNDATIFKLELPLK 390
Score = 127 (49.8 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 741
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y+ R + + + Y+A
Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 63 (27.2 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV 47
LK K + F W ++ + ++ +V + W D FSD++++C+
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL 52
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 293 (108.2 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 520
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 579
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 580 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 639
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 640 FPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLT-TER 698
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 699 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 753
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 754 KEQIEWLIEHKYI 766
Score = 200 (75.5 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 257 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEE 316
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 317 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 375
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 376 VVNDATIFKLELPLK 390
Score = 127 (49.8 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 741
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y+ R + + + Y+A
Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 63 (27.2 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV 47
LK K + F W ++ + ++ +V + W D FSD++++C+
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL 52
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 388 (141.6 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 113/401 (28%), Positives = 188/401 (46%)
Query: 206 FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN-HKF-----DPKMP-SKSPEY 258
+++ +L VH + E F D ALD AC + IN ++F PK SK+ E
Sbjct: 379 YIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEM 438
Query: 259 LAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTS 318
LAKY D+ S+M D+ IT+FKY+ DKD F Y ++ AKRLIH STS
Sbjct: 439 LAKYSDILLKKATKPEVASDMSDE--DIITIFKYLTDKDAFETHYRRLFAKRLIHGTSTS 496
Query: 319 MDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSIN- 377
+ EE +I +L+ A E+T K +M DI++S L + F + + +
Sbjct: 497 AEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQP 556
Query: 378 -ILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYL 436
+L WP + F +P+EL ++ Y + NGR L WL + + ELK
Sbjct: 557 FVLAENMWPFSYQEVE-FKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIG 615
Query: 437 K---RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTS- 492
K P+ T+ FQMAILLL+ D +T +IQ SL+ I + ++ KL+
Sbjct: 616 KPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAMVPFIKFKLIQQV 675
Query: 493 --NKEELTE-DTEIRLNLGYNNKRTKLKISGAVQKETPQEIER----TVSSVDEDRKLYL 545
+ L + +T+ +L+ Y +T + + V+ + Q + + +++L
Sbjct: 676 PPGLDALVKPETQFKLSRPYKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTE 735
Query: 546 QAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCI 586
I + + + +QI A I ++ ++ P +++ +CI
Sbjct: 736 DERIEKELNTERQIFLEACIVRIMKAKRNL-PHTTLVNECI 775
Score = 162 (62.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 31/82 (37%), Positives = 56/82 (68%)
Query: 529 EIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQS-KSFAPSISMIKKCIE 587
E ER ++ +R+++L+A IVRIMK+++ + H L+ E ++QS + F +SM+K+ I+
Sbjct: 735 EDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAID 794
Query: 588 SLIDKNYVERTANSTDEYSYVA 609
SLI K Y++R + + Y+Y+A
Sbjct: 795 SLIQKGYLQR-GDDGESYAYLA 815
Score = 109 (43.4 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 50/250 (20%), Positives = 99/250 (39%)
Query: 6 KQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSD-IYSLCVAYPEPLADRLYQETKLF 64
K+V F+ + L + +TLG + S I SL +P Q+ K
Sbjct: 162 KEVMFDPSKDVLINELLDQVTLGREGQIIQRSNISTAIKSLVALGIDP------QDLKK- 214
Query: 65 LDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVS 124
L+ ++Y+ +FE FL+ + E+Y + L+ +V++Y+ +++ E +
Sbjct: 215 LNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDH 274
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ + + ++ DH+ L+ E V ++ + ++Y L+R I + +
Sbjct: 275 TKKPLSMALNKVLITDHIEKLENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFEN 334
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALD--KACSSV 242
++ K G IS L + ++N A KK S L+ S +
Sbjct: 335 YVKKTGENEISSLLAMH-KHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKI 393
Query: 243 INHKFDPKMP 252
N F +P
Sbjct: 394 FNESFPDDIP 403
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 290 (107.1 bits), Expect = 3.5e-40, Sum P(3) = 3.5e-40
Identities = 94/324 (29%), Positives = 157/324 (48%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 398 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 457
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 458 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 516
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 517 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 575
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 576 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 635
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 636 FPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLT-TER 694
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQI 559
+E+ + +Q I+R ++ QI
Sbjct: 695 MREEENEGIVQLRILRTQEAIIQI 718
Score = 200 (75.5 bits), Expect = 3.5e-40, Sum P(3) = 3.5e-40
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 193 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 252
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 253 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEE 312
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 313 HIVSAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 371
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 372 VVNDATIFKLELPLK 386
Score = 127 (49.8 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 678 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEI 737
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y+ R + + + Y+A
Sbjct: 738 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 776
Score = 60 (26.2 bits), Expect = 3.5e-40, Sum P(3) = 3.5e-40
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 8 VDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV 47
+ F W ++ + ++ +V + W D FSD++++C+
Sbjct: 9 LQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL 48
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 293 (108.2 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 381 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 440
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 441 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 499
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 500 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 558
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 559 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 618
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 619 FPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLT-TER 677
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 678 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 732
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 733 KEQIEWLIEHKYI 745
Score = 200 (75.5 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 176 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 235
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 236 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEE 295
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 296 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 354
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 355 VVNDATIFKLELPLK 369
Score = 127 (49.8 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 661 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 720
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y+ R + + + Y+A
Sbjct: 721 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 759
Score = 49 (22.3 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 29 NVRRATWNDRFSDIYSLCV 47
+V + W D FSD++++C+
Sbjct: 13 SVTKQQWFDLFSDVHAVCL 31
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 293 (108.2 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 99/373 (26%), Positives = 178/373 (47%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 381 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 440
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 441 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 499
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 500 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 558
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV- 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 559 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVA 618
Query: 486 --ECK---LL----TSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKETPQEIERTVS 535
+ K LL ++ ++ TE T +N ++ K K++ G + ++ T
Sbjct: 619 FPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLT-TER 677
Query: 536 SVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
+E+ + +Q +RI+++++ I +++ +S ++ + ++K L K +
Sbjct: 678 MREEENEGIVQ---LRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMF--LPQKKMI 732
Query: 596 ERTANSTDEYSYV 608
+ E+ Y+
Sbjct: 733 KEQIEWLIEHKYI 745
Score = 200 (75.5 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 54/195 (27%), Positives = 92/195 (47%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 176 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 235
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
S + C +V + EC M+ L M+ L+ V GI ++ + +
Sbjct: 236 SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEE 295
Query: 185 HICKQGLEAISGLSGDNIST---QFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSS 241
HI GL + + + I+T ++VE +L + ++ VKE F D F+ A DKA +
Sbjct: 296 HIISAGLADMVA-AAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKA 354
Query: 242 VINHK--FDPKMPSK 254
V+N F ++P K
Sbjct: 355 VVNDATIFKLELPLK 369
Score = 127 (49.8 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 661 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 720
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y+ R + + + Y+A
Sbjct: 721 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 759
Score = 49 (22.3 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 29 NVRRATWNDRFSDIYSLCV 47
+V + W D FSD++++C+
Sbjct: 13 SVTKQQWFDLFSDVHAVCL 31
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 289 (106.8 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 77/239 (32%), Positives = 120/239 (50%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM E++ KL + + V KY+ +KDVF +++ L +R
Sbjct: 412 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 471
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE M+ L++ ++ NK RM DIK+S LN+ F E K N++
Sbjct: 472 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAF-KEMHKNNKLA 530
Query: 370 LGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQ 428
L +I IL AG+W + S+P ELE I E+FY +GRKL W H +S
Sbjct: 531 LPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN 589
Query: 429 VELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQIGRHIASLV 485
+ Y + + TFQ+A+L + + + ++ +++ L ++ R + SLV
Sbjct: 590 GIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLV 648
Score = 132 (51.5 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 160 DLANMYPLLRSVREGINILIDAVRDHICKQGLEAISGLSGDNIST---QFVENMLAVHKK 216
+L M+ L+ V GI ++ + +HI GL + + + I+T ++VE +L + +
Sbjct: 302 ELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVA-AAETITTDSEKYVEQLLTLFNR 360
Query: 217 YKAFVKELFSGDQSFMGALDKACSSVINHK--FDPKMP-------------SKSPEYLAK 261
+ VKE F D F+ A DKA +V+N F ++P SK PE LA
Sbjct: 361 FSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAN 420
Query: 262 YCDM 265
YCDM
Sbjct: 421 YCDM 424
Score = 97 (39.2 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y D FE +L+ + +Y+++A LQ V YM+ L EE R++R+L +
Sbjct: 192 IYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN 251
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREG 174
S + C +V + EC M+ +R++ + Y L V +G
Sbjct: 252 SVEALMECCVNALVTSFKETILAECQGMI---KRNETESRYQYL-CVEDG 297
Score = 60 (26.2 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 8 VDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV 47
+ F W ++ + ++ +V + W D FSD++++C+
Sbjct: 8 LQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL 47
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 288 (106.4 bits), Expect = 7.1e-39, Sum P(4) = 7.1e-39
Identities = 99/383 (25%), Positives = 180/383 (46%)
Query: 243 INHKFDPKMPSKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFH 300
++ K P+ SK PE LA YCDM E++ KL + + V KY+ +KDVF
Sbjct: 409 VSLKTQPE--SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFM 466
Query: 301 KFYAKMLAKRLIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFH 359
+++ L +RLI S + EE M+ L++ ++ NK RM DIK+S LN+ F
Sbjct: 467 RYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSF- 525
Query: 360 SEFVKTNEIDLGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGR 418
E K N++ L +I IL AG+W + S+P ELE I E FY +GR
Sbjct: 526 KEMHKHNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEDFYKKNHSGR 584
Query: 419 KLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKN--DAMTCGDIQTVLSLSQDQ 476
KL W H +S + Y + + TFQ+A+L + + + ++ +++ L +
Sbjct: 585 KLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAE 644
Query: 477 IGRHIASLVEC-KL---------LTSNKEELTEDTEIRLNLGYNN-KRTKLKISGAVQKE 525
+ R + SLV KL + + ++ E T +N ++ K +K++ G +
Sbjct: 645 LRRTLWSLVAFPKLKRQVLSYEPVVGSPKDFAEGTVFSINQEFSLIKNSKVQKRGKINLI 704
Query: 526 TPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKC 585
++ T +E+ + +Q +RI+++++ I +++ +S ++ + ++K
Sbjct: 705 GRLQLT-TERMREEENEGIVQ---LRILRTQEAIIQIMKMRKRISNAQLQTELVEILKNM 760
Query: 586 IESLIDKNYVERTANSTDEYSYV 608
L K ++ E+ Y+
Sbjct: 761 F--LPQKKMIKEQIEWLIEHKYI 781
Score = 136 (52.9 bits), Expect = 7.1e-39, Sum P(4) = 7.1e-39
Identities = 40/124 (32%), Positives = 61/124 (49%)
Query: 160 DLANMYPLLRSVREGINILIDAVRDHICKQGLEAISGLSGDNIST---QFVENMLAVHKK 216
+L M+ L+ V GI ++ + DHI GL + S + I+T ++VE +L + +
Sbjct: 307 ELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVA-SAETITTDSEKYVEQLLTLFNR 365
Query: 217 YKAFVKELFSGDQSFMGALDKACSSVINHK--FDPKMP-------------SKSPEYLAK 261
+ VKE F D F+ + DKA +V+N F ++P SK PE LA
Sbjct: 366 FSKLVKEAFQDDPRFLTSRDKAYKAVVNDATIFKLELPLKQKGVSLKTQPESKCPELLAN 425
Query: 262 YCDM 265
YCDM
Sbjct: 426 YCDM 429
Score = 127 (49.8 bits), Expect = 1.5e-20, Sum P(4) = 1.5e-20
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 512 KRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQ 571
KR K+ + G +Q T + E + + R L Q AI++IMK RK+I + L E++
Sbjct: 697 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKRISNAQLQTELVEI 756
Query: 572 SKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
K+ F P MIK+ IE LI+ Y++R + + Y+A
Sbjct: 757 LKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA 795
Score = 90 (36.7 bits), Expect = 7.1e-39, Sum P(4) = 7.1e-39
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHV----S 124
+Y + FE +L+ + +YK++A LQ V YM+ L EE R++R+L +
Sbjct: 197 IYRENFEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLETRRECN 256
Query: 125 SYPKVKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMY 165
S + C +V + EC M+ +R++ + Y
Sbjct: 257 SVQALMECCVNALVTSFKETILTECPGMI---KRNETESEY 294
Score = 63 (27.2 bits), Expect = 7.1e-39, Sum P(4) = 7.1e-39
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 3 LKPK-QVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCV 47
LK K + F W ++ + ++ +V + W D FSD++++C+
Sbjct: 7 LKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCL 52
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 405 (147.6 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 134/567 (23%), Positives = 262/567 (46%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D D FE + + E+Y ++ + +E++ ++ E+ FL+V S
Sbjct: 192 DSFFLTD-FEPVLISATEEYYNKAID--IELLTPIESLEKIRKLRQFESMLDSSFLNVDS 248
Query: 126 YPKVKAKCEQHMVADHLNFLQGECV--PMVAEERRHDLANMYPLLRSVREGINILIDAVR 183
+ K+K E ++ L+ + + MV + L +Y L + + + I++++
Sbjct: 249 HNKLKTVLENVLIWGKLSDIIEDLTHEAMVISNGKL-LQEIYDLSSEEKYRVTV-IESIK 306
Query: 184 DHICKQGLEAI----SGLSGDNISTQFVENMLAVHKKYKAFVKELFSGD---QSFMGALD 236
+I K + + G N T E ++ +++ +F++ + G + G +
Sbjct: 307 SYINKNAINIPFNEGNRKKGQNAITWSSE-IVELYRSQHSFLESIDFGSVRLNNLTGDVS 365
Query: 237 KACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXES-EMDDKLSQSITVFKYIDD 295
A + + K + EYL+ Y D E ++ L S + + +
Sbjct: 366 NAILGDVFSMYFSKEGALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTE 425
Query: 296 KDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLN 355
KD+F K Y K L++RL+ Q+S ++ E+ M+ +K+ G FT+K ML DI +S +
Sbjct: 426 KDIFEKIYKKQLSRRLLQQRSL-VEIEKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMY 484
Query: 356 EKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPT--VISSFSVPQELEKCIHMFEKFYHG 413
+ F + N I+ + F+ +L SWP T + S+P + + + FE +Y
Sbjct: 485 QAFQHSTI--NSIEY-LSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSL 541
Query: 414 QFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLS 473
++ R L W H++S +E+ + Y ++ + I LLFE + +T G+I + +
Sbjct: 542 KYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIP 601
Query: 474 QDQIGRHIASLV---ECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEI 530
D + + S+ CK+L K + + + +N +++ K+K+ Q+
Sbjct: 602 IDDVKSLVMSMSTIPRCKIL--KKSSSSGNMKFSVNYFFSSPNRKVKVPVIACPLPSQKS 659
Query: 531 ER--TVSSVDE-DRKLYLQ--AAIVRIMKSRKQIRHNALIQEVL--SQSK-SFAPSISMI 582
+ T SSVD D ++ ++ A IVRIMK+ ++ H L++ +QS+ S PSI +
Sbjct: 660 DNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSI--L 717
Query: 583 KKCIESLIDKNYVERTANSTDEYSYVA 609
K+ I+ LI+K Y++R A+ Y Y++
Sbjct: 718 KRSIQLLIEKEYIQRNADDPSYYHYLS 744
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 373 (136.4 bits), Expect = 6.1e-34, P = 6.1e-34
Identities = 86/281 (30%), Positives = 151/281 (53%)
Query: 333 CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVIS 392
CG FT+K M D+++S + +F ++++ + I ++NIL G WP V
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQF-KQYMQNQNVPGNIELTVNILTMGYWPT--YVPM 58
Query: 393 SFSVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAIL 452
+P E+ K +F+ FY G+ +GRKL W + LK + + + + FQ +L
Sbjct: 59 EVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVL 118
Query: 453 LLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLV--ECKLLTSNKE--ELTEDTEIRLNLG 508
L+F + + + +I+ + ++ R + SL + ++L N + ++ + + N
Sbjct: 119 LMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDD 178
Query: 509 YNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEV 568
+ +K ++KI+ KET +E T V +DR+ + AAIVRIMK RK + HN L+ EV
Sbjct: 179 FKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEV 238
Query: 569 LSQSKSFAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
+Q K F + +KK IESLID++Y+ER + ++Y+Y+A
Sbjct: 239 YNQLK-FPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA 278
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 265 (98.3 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 70/182 (38%), Positives = 105/182 (57%)
Query: 438 RPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLVEC-----KLLTS 492
R + + + TFQM IL+LF + T +IQ + + ++ R + SL C ++LT
Sbjct: 128 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA-CGKPTQRVLTK 186
Query: 493 N-KEELTEDTEI-RLNLGYNNK--RTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAA 548
K + E+ I +N + +K R K++ A Q E+ E + T VD+DRK ++AA
Sbjct: 187 EPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAA 246
Query: 549 IVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLIDKNYVERTANSTDEYSY 607
IVRIMKSRK+++HN L+ EV Q K+ F PS +IKK IE LI++ Y+ RT Y+Y
Sbjct: 247 IVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 306
Query: 608 VA 609
VA
Sbjct: 307 VA 308
Score = 86 (35.3 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 362 FVKTNEIDLG-IHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYHGQFNGRKL 420
F ++ LG + ++ +L G WP + ++P +F +FY + +GR+L
Sbjct: 30 FFSFTQVSLGGVDLTVRVLTTGYWPT-QSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQL 88
Query: 421 SWLHNISQVELKLSY 435
+ H++ +L ++
Sbjct: 89 TLQHHMGSADLNATF 103
Score = 38 (18.4 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 175 INILIDAVRDHICKQGLEAISGLSGDNISTQFVE 208
+N L+ + ++ + G + IS L G NI F +
Sbjct: 3 MNTLV-TLTQYLYEHGRDNISQLIGGNIFFSFTQ 35
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 324 (119.1 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 81/266 (30%), Positives = 135/266 (50%)
Query: 66 DQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSS 125
D +Y D FE +FLE + Y +E KL+Q V +Y+ V + L EE +R + +L ++
Sbjct: 430 DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT 489
Query: 126 YPKVKAKCEQHMVADHLN-FLQGECVPMVAEERRHDLANMYPLLRSVREGINILIDAVRD 184
+ A E+ ++ +HL LQ ++ E R DL+ +Y L VR G+ +L+ +
Sbjct: 490 QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE 549
Query: 185 HICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSVIN 244
+I G + D V+ +L K + F ++ F+ A+ +A + IN
Sbjct: 550 YIKAFGSTIVINPEKDKT---MVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFIN 606
Query: 245 HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYA 304
K P+K E +AKY D + E++ L + + +F++I KDVF FY
Sbjct: 607 -----KRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYK 661
Query: 305 KMLAKRLIHQQSTSMDGEEAMINKLK 330
K LAKRL+ +S S+D E++M++KLK
Sbjct: 662 KDLAKRLLVGKSASVDAEKSMLSKLK 687
Score = 57 (25.1 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 4 KPKQVD--FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQET 61
KPK + ++TW L+E ++ + +++ + + + +LC +Y ++ LY++
Sbjct: 258 KPKLPENYTDETWQKLKEAVEAIQNSTSIKY-NLEELYQAVENLC-SYK--ISANLYKQL 313
Query: 62 KLFLDQHLYVDIFETQFLEMS 82
+ + H+ I QF E S
Sbjct: 314 RQICEDHIKAQIH--QFREYS 332
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 199 (75.1 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 44/101 (43%), Positives = 67/101 (66%)
Query: 510 NNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVL 569
++K T ++ Q+E E+E +++ E RK+ + AAIVRI+KSR+ I+HN LI+E+L
Sbjct: 762 SSKNTNKSVAKTEQEE---ELEEVNANIMEGRKIEVNAAIVRILKSRQSIKHNDLIEELL 818
Query: 570 SQ-SKSFAPSISMIKKCIESLIDKNYVERTANSTDEYSYVA 609
Q S F PSI +IK+ IE LIDK Y++R + + Y Y+A
Sbjct: 819 KQLSNRFQPSIILIKQRIEDLIDKEYLKRDTDDRNLYHYIA 859
Score = 134 (52.2 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 69/288 (23%), Positives = 120/288 (41%)
Query: 165 YPLLR-SVREGINILIDAVRDHICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKE 223
Y LLR ++E I +++ D++ + +E SG N S F + KY+ + +
Sbjct: 341 YQLLRLRLKEAIVAQGNSLPDYV-RSSIEN-SGKKQSNNSPAFATKWIETILKYRDQLMQ 398
Query: 224 LF--SGDQSFM--GALDKACSSVIN--HKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXES 277
++ S D++ M A IN +K P + +PE L+ Y D +
Sbjct: 399 VWKNSFDENLMIEQTFTFAMRDFINGSNKRGPASVN-APELLSVYMDYFIKQLTKGSSSN 457
Query: 278 ---------EMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQ-----STSMDGEE 323
+ +D +S SI ++I DKD F YA AKR ++ + S++ D EE
Sbjct: 458 KDISLKSGDQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKTGNSPSSNKDIEE 517
Query: 324 AMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNE-IDLGIHFSINILQAG 382
++ KL + G +K +M D++ S + K ++ DL + + I
Sbjct: 518 IILAKLSEEMGTSSLDKVIKMNRDVRSSKDTTNDWKRYLNKQSKSTDL-VEMELKICNVT 576
Query: 383 SWPLGPTVI-----------SSFSVPQELEKCIHMFEKFYHGQFNGRK 419
WP T + F P++L I F++F+ NG+K
Sbjct: 577 DWPKSMTKDYKWFSRTENEETPFKWPRQLRNTIKQFDEFWS---NGKK 621
Score = 126 (49.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 45/187 (24%), Positives = 80/187 (42%)
Query: 302 FYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISGGLNEKFHSE 361
F + L + + S++ D EE ++ KL + G +K +M D++ S +
Sbjct: 496 FAKRFLNSKTGNSPSSNKDIEEIILAKLSEEMGTSSLDKVIKMNRDVRSSKDTTNDWKRY 555
Query: 362 FVKTNE-IDLGIHFSINILQAGSWPLGPTVI-----------SSFSVPQELEKCIHMFEK 409
K ++ DL + + I WP T + F P++L I F++
Sbjct: 556 LNKQSKSTDL-VEMELKICNVTDWPKSMTKDYKWFSRTENEETPFKWPRQLRNTIKQFDE 614
Query: 410 FY-HGQFNGRK-LSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQ 467
F+ +G+ N K L W ++L+++Y R Y + + TF I+LLF T D
Sbjct: 615 FWSNGKKNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQS--TNADGS 672
Query: 468 TVLSLSQ 474
TV + +
Sbjct: 673 TVSAFDE 679
Score = 100 (40.3 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 43/215 (20%), Positives = 99/215 (46%)
Query: 408 EKFYHGQFNGRK-LSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLF--EKNDA---- 460
E + +G+ N K L W ++L+++Y R Y + + TF I+LLF + +A
Sbjct: 614 EFWSNGKKNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQSTNADGST 673
Query: 461 ---------MTCGDIQTVLSLSQDQIGRHIASLV---ECKLLTS--NKEELTEDTEIRLN 506
+T +I + + + ++ RH+ S+ + +LL +++ ++ +LN
Sbjct: 674 VSAFDEMKELTYEEILELTGIPEPELKRHLQSIAVAPKSRLLVKVPMSKDVNKNDVFKLN 733
Query: 507 LGYNNKRTKLKI---------SGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKSRK 557
+ + K+K+ S + + + ++V+ +++ +L + IM+ RK
Sbjct: 734 AKFKSPSVKVKVLTVSASSSSSASSSSSSSKNTNKSVAKTEQEEEL--EEVNANIMEGRK 791
Query: 558 QIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDK 592
I NA I +L +S + +I++ ++ L ++
Sbjct: 792 -IEVNAAIVRILKSRQSIKHN-DLIEELLKQLSNR 824
Score = 77 (32.2 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 63 LFLDQHLYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRF-L 121
LF D + + FE +FL+ S E + + + + ++Y++ Q + +E NR VRF L
Sbjct: 213 LFGDSYYQIK-FEPKFLKSSEESLYNLSQEFVSHNLGTKYLQLTTQFIKDEDNR-VRFYL 270
Query: 122 HVSSYPKVKAKCEQHMVADHLN 143
S+YPK+ M+ D ++
Sbjct: 271 PPSTYPKLVELMNNIMIKDKID 292
Score = 52 (23.4 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 25/113 (22%), Positives = 47/113 (41%)
Query: 8 VDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVA-YPEPLADRLYQETKLFL- 65
+DF+K W L I + NV ++ + Y L + + L D + K L
Sbjct: 34 IDFDKNWSVLSSAISQIQNK-NVSNLSYEQLYRKAYVLVLRKFGGKLYDNVANVIKTHLL 92
Query: 66 ---DQHLYVDIFETQFLE-MSGEWYKS-EASKLLQTCNVSQYMERVLQVLHEE 113
++ L V F++ + EW + +A K + +V Y+ +V H++
Sbjct: 93 TRREKLLSVSANHDLFMQSILQEWSEHLQAMKFIS--DVLMYLNKVYVAEHKK 143
Score = 38 (18.4 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 85 WYKSEASKLLQTCNVSQYMERVLQVLHEETNR 116
W K S + + N+ Y L++L+ R
Sbjct: 305 WLKPVVSNIFEDTNIETYHYADLKMLYNLIGR 336
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 284 (105.0 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 104/379 (27%), Positives = 182/379 (48%)
Query: 253 SKSPEYLAKYCDMXXXXX--XXXXXESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKR 310
SK PE LA YCDM ++D +L + V KY+++KDVF +++ L +R
Sbjct: 479 SKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRR 538
Query: 311 LIHQQSTSMDGEEAMINKLKQA-CGYEFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEID 369
LI S + EE ++ L++ ++ N+ RM DIK+S LN +F + + + I+
Sbjct: 539 LILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTSISRHDAIN 598
Query: 370 LGIHFS---INILQAGSWPLGPTVISSFSVP--QELEKCIHMFEK--FYHGQFNGRKLSW 422
+ I + + S L P + + +P +E K H K +YH NG +++
Sbjct: 599 IKILNAGAWARCSERVSVSL-PIELEDY-IPDVEEFYKKKHSGRKLQWYHHMSNGT-ITF 655
Query: 423 LHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQ---TVLSL-SQDQIG 478
++N + +L ++ + Q + A D + T+ SL + +I
Sbjct: 656 VNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIK 715
Query: 479 RHIASLVECKLLTSNKEELTEDTEIRLNL-------GYNNKRTKLKISGAVQKETPQEIE 531
+ I L+E ++S K+ E+T +N G + +R KL + G +Q T + +
Sbjct: 716 KQIL-LMEPAAISSPKD-FAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQ 773
Query: 532 RTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESLI 590
S+ + R L Q AI++IMK RK++ + AL E++ K+ F PS MIK+ +E LI
Sbjct: 774 EDNQSIVQLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLI 833
Query: 591 DKNYVERTANSTDEYSYVA 609
+ Y+ R + + + YVA
Sbjct: 834 ENKYMRRDDDDINMFIYVA 852
Score = 238 (88.8 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
Identities = 95/411 (23%), Positives = 176/411 (42%)
Query: 69 LYVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPK 128
+Y + FE +L+ + E+Y+ ++++ Q V YM+ L EE R+ R+L SS+
Sbjct: 275 IYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSI 334
Query: 129 VKAKCEQHMVADHLNFLQGECVPMVAEERRHDLANMYPLLRSVREGINI--LIDAVRDHI 186
+ ++ DHLN + EC ++ + L M+ L+ V G+ + ++ ++ HI
Sbjct: 335 LTYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHI 394
Query: 187 CKQGLEAISGLSGDNISTQ----FVENMLAVHKKYKAFVKELFSGDQSFMGALDKACSSV 242
GL + LS + TQ +VE +L + K+ V+ F+ D F+ A D A +V
Sbjct: 395 MSAGLADM--LSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTV 452
Query: 243 INHK--FDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYIDDKDVFH 300
+N F ++P+ KY +M L + + K + + +
Sbjct: 453 VNDTSVFKMELPTSIANRGVKYTAPESKCPELLANYCDM---LLRRTPLSKRLTSEQIDA 509
Query: 301 KFYAKMLAKRLIHQQSTSMDGEEAMINK---LKQACGYEFTNKFHRMLTDIKISGGLNEK 357
+ +L + ++ + M + + + L + E L ++ + +
Sbjct: 510 RLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNR 569
Query: 358 FHSEF--VKTNEIDLGIHF--------SINILQAGSWPLGP-TVISSFSVPQELEKCIHM 406
F +K +E DL F +INI + + S S+P ELE I
Sbjct: 570 LARMFQDIKVSE-DLNTQFRTSISRHDAINIKILNAGAWARCSERVSVSLPIELEDYIPD 628
Query: 407 FEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEK 457
E+FY + +GRKL W H++S + Y + + TFQMA+L + +
Sbjct: 629 VEEFYKKKHSGRKLQWYHHMSNGTITFVNNFGRYDLDVTTFQMAVLFAWNQ 679
Score = 51 (23.0 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 10 FNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLY 58
F + W + + ++ V + W D F ++ +C+ + E A ++Y
Sbjct: 13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCL-WDEKGAAKIY 60
>UNIPROTKB|Q5T2B4 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00643617
SMR:Q5T2B4 Ensembl:ENST00000421317 Uniprot:Q5T2B4
Length = 216
Score = 258 (95.9 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLHKRVLESEEQVLVMYHRYWE-EYSK 96
>UNIPROTKB|F1RUR6 [details] [associations]
symbol:F1RUR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:CU914378 Ensembl:ENSSSCT00000012152 Uniprot:F1RUR6
Length = 106
Score = 258 (95.9 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 1 MSLKPKQVDFNKTWGSLQETIQGVITLGNVRRATWNDRFSDIYSLCVAYPEPLADRLYQE 60
MSLKP+ VDF++TW L TI+ V+ L V RATWNDRFSDIY+LCVAYPEPL +RLY E
Sbjct: 1 MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE 60
Query: 61 TKLFLD---QHLYVDIFET--QFLEMSGEWYKSEASK 92
TK+FL+ +HL+ + E+ Q L M +++ E SK
Sbjct: 61 TKIFLENHVRHLHKRVLESEEQVLVMYHRYWE-EYSK 96
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 261 (96.9 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 93/379 (24%), Positives = 177/379 (46%)
Query: 235 LDKACSSVINHKFDPKMPSKSPEYLAKYCDMXXXXXXXXXXESEMDDKLSQSITVFKYID 294
+D C IN K P++ L Y + E + D+L + + +++
Sbjct: 310 VDAVCKEEINRKGQIIDPTR---LLVTYAN--ELMTKRQESEEAIIDELKRIVKCVEFLS 364
Query: 295 DKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKL--KQACGYEFTNKFHRMLTDIKISG 352
D+ F Y K L R I++ STS DG E+++ L K+ + T + L D+
Sbjct: 365 DEYKFIDMYLKALRIRQINETSTS-DGVESIMYSLLNKKMANF-VTRCIYVQLRDVDKLR 422
Query: 353 GLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIHMFEKFYH 412
L ++F + + + I LG F + G + ++P EL++ F FY
Sbjct: 423 TLKKEFQ-DHLNSKGIKLGFDFRPKCFKND----GSFENFNLTLPDELQQAWKEFRIFYE 477
Query: 413 GQ-FNGRKLSWLHN-ISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVL 470
+ + + L+N +S E+ + Y + + T QMA+L+LF +++ T ++ T L
Sbjct: 478 ARKLQSKAIIQLNNELSSGEITCHLNQSVYILEVSTLQMAVLMLFNRHERFTEQELVTAL 537
Query: 471 SLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEI 530
+ + + +L + K L E+ + I +N+ + N++ +L + + ++ +
Sbjct: 538 GVELETLQE---ALKQIKFLVYI--EVNKVNYIEINMDFTNRKRRLFCNEPLPRKMRKIE 592
Query: 531 ERTVSSVDEDRKLYLQAAIVRIMKSRKQIRHNALIQEVLSQSKS-FAPSISMIKKCIESL 589
E++ + R + AAIVRIMK +KQ+ ++ LI V + K P +S IKK ++ L
Sbjct: 593 EKSEIELKIRRDKQVDAAIVRIMKGQKQLEYSELISLVYEELKDRVKPQVSFIKKRLDYL 652
Query: 590 IDKNYVERTANSTDEYSYV 608
+++ Y+ER N + Y Y+
Sbjct: 653 VEREYLERD-NYYNIYRYL 670
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 157 (60.3 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 287 ITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLT 346
+++F+Y+ DK+ F K+Y + KRLI+ S ++ + + LK+ CG +FT K +L
Sbjct: 705 LSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGAQFTKKIEIILK 764
Query: 347 DIKISGGLNEKFHSEFVKT-NEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIH 405
D+K + KF+ E N +++NI+ SW T ++ P ++ C
Sbjct: 765 DMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESWEYVNTE-NNVIYPPMIKMCNE 823
Query: 406 MFEKFYHGQFNGRKLSWLHNISQVELKLSY 435
F FY + + +L + L++ +
Sbjct: 824 AFFLFYQKYNKSKNIKFLPLLGLCTLRVHF 853
Score = 104 (41.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 36/166 (21%), Positives = 78/166 (46%)
Query: 437 KRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLV---ECKLLTSN 493
K+ ++T+ Q +LLLF K + +I+ + +S + I R++ ++ E +L +
Sbjct: 959 KKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYD 1018
Query: 494 KEELTEDTEIRLNLGYNNKRTKLKIS--GAVQKET--PQEIERTVSSVDEDRKLYLQAAI 549
K + ++LN + +K+ L ++ + K+ P + ED+ L++ AAI
Sbjct: 1019 KA----NEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSLLNEDNEIEDKTLHIDAAI 1074
Query: 550 VRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
V+ +K+ + + + + K S IK I SL+ + ++
Sbjct: 1075 VKFLKTNGKSSERKICSFI--KDKMDISSNEQIKNRISSLLSREFI 1118
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 157 (60.3 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 287 ITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLT 346
+++F+Y+ DK+ F K+Y + KRLI+ S ++ + + LK+ CG +FT K +L
Sbjct: 705 LSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGAQFTKKIEIILK 764
Query: 347 DIKISGGLNEKFHSEFVKT-NEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEKCIH 405
D+K + KF+ E N +++NI+ SW T ++ P ++ C
Sbjct: 765 DMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESWEYVNTE-NNVIYPPMIKMCNE 823
Query: 406 MFEKFYHGQFNGRKLSWLHNISQVELKLSY 435
F FY + + +L + L++ +
Sbjct: 824 AFFLFYQKYNKSKNIKFLPLLGLCTLRVHF 853
Score = 104 (41.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 36/166 (21%), Positives = 78/166 (46%)
Query: 437 KRPYFVTMQTFQMAILLLFEKNDAMTCGDIQTVLSLSQDQIGRHIASLV---ECKLLTSN 493
K+ ++T+ Q +LLLF K + +I+ + +S + I R++ ++ E +L +
Sbjct: 959 KKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYD 1018
Query: 494 KEELTEDTEIRLNLGYNNKRTKLKIS--GAVQKET--PQEIERTVSSVDEDRKLYLQAAI 549
K + ++LN + +K+ L ++ + K+ P + ED+ L++ AAI
Sbjct: 1019 KA----NEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSLLNEDNEIEDKTLHIDAAI 1074
Query: 550 VRIMKSRKQIRHNALIQEVLSQSKSFAPSISMIKKCIESLIDKNYV 595
V+ +K+ + + + + K S IK I SL+ + ++
Sbjct: 1075 VKFLKTNGKSSERKICSFI--KDKMDISSNEQIKNRISSLLSREFI 1118
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 136 (52.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 39/166 (23%), Positives = 80/166 (48%)
Query: 70 YVDIFETQFLEMSGEWYKSEASKLLQTCNVSQYMERVLQVLHEETNRSVRFLHVSSYPKV 129
Y + FE+ L+ + +Y +AS+ + + YM +V + L E R +LH + PK+
Sbjct: 194 YEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYLHSITEPKL 253
Query: 130 KAKCEQHM-VADHLNFLQGE---CVPMVAEERRHDLANMYPLLRSVREGINILIDAVRDH 185
K + + V N L+ E ++ +++++DL+ +Y L + + + + D + H
Sbjct: 254 VEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPKRLGRVADLFKKH 313
Query: 186 ICKQGLEAISGLSGDNISTQFVENMLAVHKKYKAFVKELFSGDQSF 231
I ++G A+ + D + Q ++ +H K+ +V E F F
Sbjct: 314 ITEEG-NALIKQADDKTTNQL---LIELHNKFIVYVIECFQNHTLF 355
Score = 55 (24.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/71 (19%), Positives = 36/71 (50%)
Query: 4 KPKQVDFNKTWGSLQETIQGVITL--GNVRRATWNDR----FSDIYSLCVAYPEPLADRL 57
+P+Q+ F + W ++Q+ I +I + G + ++ IY +CV + + +L
Sbjct: 8 RPRQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSD-YSQQL 66
Query: 58 YQETKLFLDQH 68
Y++ + ++ +
Sbjct: 67 YEKYRKVIEDY 77
>POMBASE|SPBP23A10.04 [details] [associations]
symbol:apc2 "anaphase-promoting complex cullin family
subunit Apc2" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0008054 "cyclin catabolic process"
evidence=IC] [GO:0016567 "protein ubiquitination" evidence=IC]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IC] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IC] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 PomBase:SPBP23A10.04 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 GO:GO:0030071 EMBL:CU329671
Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145 GO:GO:0008054
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:NP_001018806.1 ProteinModelPortal:Q874R3
IntAct:Q874R3 STRING:Q874R3 EnsemblFungi:SPBP23A10.04.1
GeneID:3361204 KEGG:spo:SPBP23A10.04 OMA:SHWANFR OrthoDB:EOG4XPTQ5
NextBio:20811314 Uniprot:Q874R3
Length = 681
Score = 149 (57.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 58/245 (23%), Positives = 102/245 (41%)
Query: 281 DKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNK 340
D + I++FK K+ K +LA RL+ + E I LK G
Sbjct: 374 DVVGSLISIFK---SKEPLVKELQLLLADRLLQLTDYHYEVEAKNIEFLKYRFGETVLQM 430
Query: 341 FHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQEL 400
ML DI+ S +++ H E N + G+H + IL WP + F +P L
Sbjct: 431 CSVMLNDIENSRFIDQSIHME----NYVSKGLH--VTILSRLFWPT--LSVRYFHLPGPL 482
Query: 401 EKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDA 460
+K + + + Y + R+L +L N+ VEL++ R +T+ Q A + LFE+
Sbjct: 483 KKELDAYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPEQAAFISLFEETST 542
Query: 461 MTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLGYNNKRTKLKISG 520
+ +L ++ + RH+ + ++LT ++ E +++
Sbjct: 543 LHIEKAAELLDQPKEIVERHLKFWLHHRVLTDIGDDRYRVRETEAETATETVLDEIQGVS 602
Query: 521 AVQKE 525
AVQ E
Sbjct: 603 AVQSE 607
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 47/193 (24%), Positives = 83/193 (43%)
Query: 293 IDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRMLTDIKISG 352
I K+ Y MLA++L+++ +D E + LK G + ML D+ S
Sbjct: 547 IGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDLIDSK 606
Query: 353 GLN---EKFHSEFVKTNEIDLGIH-FSINILQAGSWPLGPTVISSFSVPQELEKCIHMFE 408
+N +K + E +L + + IL WP P +P ++K + +
Sbjct: 607 RVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWP--PIQDEPLELPGPVDKLLSDYA 664
Query: 409 KFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTCGDIQT 468
YH RKL W N+ V+L+L + R T+ AI++ F++ + T D+
Sbjct: 665 NRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTYKDLAE 724
Query: 469 VLSLSQDQIGRHI 481
V+ + D + R +
Sbjct: 725 VIGIPIDALNRRV 737
>CGD|CAL0005690 [details] [associations]
symbol:orf19.6821 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0010458 "exit from mitosis" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069
CGD:CAL0005690 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
KO:K03349 InterPro:IPR014786 Pfam:PF08672 SUPFAM:SSF75632
GO:GO:0031461 eggNOG:NOG306201 EMBL:AACQ01000029 EMBL:AACQ01000028
RefSeq:XP_719797.1 RefSeq:XP_719914.1 ProteinModelPortal:Q5ADM0
STRING:Q5ADM0 GeneID:3638545 GeneID:3638645 KEGG:cal:CaO19.14113
KEGG:cal:CaO19.6821 Uniprot:Q5ADM0
Length = 807
Score = 150 (57.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 81/341 (23%), Positives = 159/341 (46%)
Query: 276 ESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGY 335
+ ++ D + I++F D KD+F + ++ LI + +++ E+ +N LK G
Sbjct: 472 KGKVSDIIESLISIF---DSKDIFIDEFTRLFGDSLIKLKDYNVEEIESNLNLLKSRFGK 528
Query: 336 EFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWP--LGP--TVI 391
+ M+ DIK S LN+ F TN F+ ++L W L T
Sbjct: 529 QNFATLDVMIRDIKESEYLNDLFVRNTRNTN-------FNTSVLSHLYWSSILENINTDA 581
Query: 392 SSFSVPQELEKCIHMF-EKFYHGQFNGRKLSWLHNISQVELKLSYLKR-PYFVTMQTFQM 449
++F VP+E+E F +KF ++ GR L L ++ V L+L + K P + +
Sbjct: 582 NNFKVPKEIEDKFQSFKDKFAQEKY-GRTLELLPSLGLVTLQLEFKKSGPRVFKVTPDKA 640
Query: 450 AILLLF-EKNDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDTEIRLNLG 508
+I+ LF EK D ++ I L++S+ + +A V+ +LT ELT+ I +N
Sbjct: 641 SIISLFNEKEDELSVSYIAQTLNMSEYMVSNGLAYWVKEGVLT----ELTKTLYI-VNDD 695
Query: 509 YNNKRTKLKISGAVQKETPQEIERTVSSVD------EDRK---LYLQAAIVRIMKSRKQI 559
+ + + + + + I+ S++ ED+ +++ IV I+++ I
Sbjct: 696 DDEEEEEGNVFPEKAESSKHGIDSATSNLTSVKSGMEDKFSEIAIIESYIVTILQNITSI 755
Query: 560 ---RHNALIQEVLSQSK-SFAP-SISMIKKCIESLIDKNYV 595
R L+ ++ + K FA S S++++ ++SL++ + +
Sbjct: 756 NFERMKTLLNLMVPKDKLDFANVSESLLEEYLDSLVENSKI 796
Score = 44 (20.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 36 NDRFSDIYSLCVAYPE 51
N R +IYS+ + YPE
Sbjct: 289 NLRIQEIYSMVLQYPE 304
>RGD|1305546 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005680
"anaphase-promoting complex" evidence=ISO] [GO:0031915 "positive
regulation of synaptic plasticity" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
[GO:0070979 "protein K11-linked ubiquitination" evidence=ISO]
[GO:0090129 "positive regulation of synapse maturation"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 RGD:1305546 GO:GO:0005634
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773
GO:GO:0006511 GO:GO:0005680 HOVERGEN:HBG045327 GO:GO:0090129
GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 EMBL:BC107471 IPI:IPI00373399
UniGene:Rn.20099 STRING:Q3B7T7 PhosphoSite:Q3B7T7 UCSC:RGD:1305546
InParanoid:Q3B7T7 ArrayExpress:Q3B7T7 Genevestigator:Q3B7T7
Uniprot:Q3B7T7
Length = 539
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 286 SITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRML 345
S+ V Y KD+F Y +LA RL+HQ S S + E + LK G + ML
Sbjct: 220 SLLVSIY-GSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVML 278
Query: 346 TDIKISGGLNEKFHSEFVKT---NEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEK 402
D+ S +N E K + G+ +++ IL + WP P VP+++
Sbjct: 279 KDMADSRRINANIREEDEKRPVEEQPPFGV-YAV-ILSSEFWP--PFKDEKLEVPEDIRA 334
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMT 462
+ ++ K Y R LSW H + V + + R V + Q +LL F+ + T
Sbjct: 335 ALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQASWT 394
Query: 463 CGDIQTVLSL 472
++ V+ +
Sbjct: 395 LEELSKVVKM 404
>UNIPROTKB|F1PYP1 [details] [associations]
symbol:TMEM210 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 OMA:MLRGVLF
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00390000008939 EMBL:AAEX03006734
Ensembl:ENSCAFT00000030976 Uniprot:F1PYP1
Length = 885
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 286 SITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRML 345
S+ V Y KD+F Y +LA RL+HQ S S + E + LK G + ML
Sbjct: 499 SLLVSIY-GSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVML 557
Query: 346 TDIKISGGLNEKFHSEFVKT---NEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEK 402
D+ S +N E K + G+ +++ IL + WP P VP+++ +
Sbjct: 558 KDMADSRRINANIREEDEKRPAEEQPPFGV-YAV-ILSSEFWP--PFKDEKLEVPEDIRE 613
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMT 462
+ ++ K Y R LSW H + V + + R V + Q +LL F+ T
Sbjct: 614 ALEVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQATWT 673
Query: 463 CGDIQTVLSL 472
++ V+ +
Sbjct: 674 LEELSKVVKM 683
>MGI|MGI:2139135 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005680 "anaphase-promoting complex" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0045773 "positive regulation of axon extension"
evidence=ISO] [GO:0050775 "positive regulation of dendrite
morphogenesis" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISO] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 UniPathway:UPA00143
MGI:MGI:2139135 GO:GO:0051301 GO:GO:0007067 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773 GO:GO:0006511
GO:GO:0005680 CTD:29882 eggNOG:COG5647 HOVERGEN:HBG045327 KO:K03349
OMA:MLRGVLF OrthoDB:EOG4T1HM4 GO:GO:0090129 GO:GO:0031915
GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 EMBL:AK033784 EMBL:AK170676 EMBL:AL732309
EMBL:BC027351 EMBL:BC137583 IPI:IPI00227654 RefSeq:NP_780509.2
UniGene:Mm.291624 ProteinModelPortal:Q8BZQ7 SMR:Q8BZQ7
STRING:Q8BZQ7 PhosphoSite:Q8BZQ7 PaxDb:Q8BZQ7 PRIDE:Q8BZQ7
Ensembl:ENSMUST00000028341 GeneID:99152 KEGG:mmu:99152
GeneTree:ENSGT00390000016127 InParanoid:Q3TCK5 NextBio:353811
Bgee:Q8BZQ7 CleanEx:MM_ANAPC2 Genevestigator:Q8BZQ7
GermOnline:ENSMUSG00000026965 Uniprot:Q8BZQ7
Length = 837
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 286 SITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRML 345
S+ V Y KD+F Y +LA RL+HQ S S + E + LK G + ML
Sbjct: 518 SLLVSIY-GSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVML 576
Query: 346 TDIKISGGLNEKFHSEFVKT---NEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEK 402
D+ S +N E K + G+ +++ IL + WP P VP+++
Sbjct: 577 KDMADSRRINANIREEDEKRPVEEQPPFGV-YAV-ILSSEFWP--PFKDEKLEVPEDIRA 632
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMT 462
+ ++ K Y R LSW H + V + + R V + Q +LL F+ + T
Sbjct: 633 ALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQNQASWT 692
Query: 463 CGDIQTVLSL 472
++ V+ +
Sbjct: 693 LEELSKVVKM 702
>UNIPROTKB|F1NLT0 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0005680
OMA:MLRGVLF GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 EMBL:AADN02026919 IPI:IPI00604035
Ensembl:ENSGALT00000014053 Uniprot:F1NLT0
Length = 820
Score = 143 (55.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 286 SITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRML 345
S+ V Y KD+F Y +LA RL+HQ + S + E + LK G + ML
Sbjct: 501 SLLVSIY-GSKDLFINEYRTLLADRLLHQFNYSAEREIRNVELLKLRFGEAQMHYCEVML 559
Query: 346 TDIKISGGLNEKFHSEFVKTNEIDLGIHFSIN--ILQAGSWPLGPTVISSFSVPQELEKC 403
D+ S +N E K E + FS+ IL + WP P +P+++++
Sbjct: 560 KDMADSRRINANIRDEEEKLPEEERP-PFSLVAVILSSEFWP--PLKEEKLELPEQVKEA 616
Query: 404 IHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMTC 463
+ + K Y R L+W +++ V L + R +++ AI+L F+ T
Sbjct: 617 MEAYSKKYEKLKAMRTLNWKYHLGLVSLDVELADRTLSLSVSPVHAAIILHFQTKSTWTL 676
Query: 464 GDIQTVLSLSQDQIGR 479
++ VL + + R
Sbjct: 677 AELSEVLKVPVTSLKR 692
>ASPGD|ASPL0000051025 [details] [associations]
symbol:AN10258 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GO:GO:0031461
EnsemblFungi:CADANIAT00008784 OMA:TWQATVI Uniprot:C8VLZ0
Length = 918
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 55/225 (24%), Positives = 93/225 (41%)
Query: 276 ESEMDDKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGY 335
+S+ D + I++F D K+ F + MLA RL+ Q+ + E +++ LK G
Sbjct: 569 KSKSSDVIGSLISIF---DSKETFVRELRDMLADRLL-QKRAEFEQEMSVLELLKLRFGD 624
Query: 336 EFTNKFHRMLTDIKISGGLNEKFHSEFVKTNEIDLGI-HFSINILQAGSWPLGPTVISSF 394
ML DI S ++ ++ TN D IL WP F
Sbjct: 625 NALQACEVMLRDIFDSRRVDTVVRNDQGMTNSQDQETPELHAKILSHFFWP--ELKGHQF 682
Query: 395 SVPQELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLL 454
VP E+ + + + + RKL+WL+ QV ++L R + + T+Q ++
Sbjct: 683 KVPSEITELQQRYAEGFESLKQSRKLTWLNGFGQVTVELDLEDRVFVEEVSTWQATVIYA 742
Query: 455 FEKNDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTE 499
F A + +T+ LS Q+ A + L ++ LTE
Sbjct: 743 FNSGTAESESVSKTIPELSA-QLDMSAALVRSACLFWVSRRILTE 786
>WB|WBGene00000143 [details] [associations]
symbol:apc-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 GO:GO:0009792 GO:GO:0007126 GO:GO:0006898
GO:GO:0051301 GO:GO:0007067 GO:GO:0040035 GO:GO:0040039
GO:GO:0006511 KO:K03349 InterPro:IPR014786 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:FO080533 PIR:S44845 PIR:S44846 RefSeq:NP_498762.2
ProteinModelPortal:P34514 SMR:P34514 IntAct:P34514
MINT:MINT-1054240 STRING:P34514 PaxDb:P34514 EnsemblMetazoa:K06H7.6
GeneID:176139 KEGG:cel:CELE_K06H7.6 UCSC:K06H7.6 CTD:176139
WormBase:K06H7.6 eggNOG:NOG306201 HOGENOM:HOG000022396
InParanoid:P34514 OMA:HEINAEL NextBio:891294 Uniprot:P34514
Length = 731
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 285 QSITVFKYI----DDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNK 340
Q + VF + K++F K Y +LA+RL + + E+ ++ LK Y
Sbjct: 397 QGVDVFNMLVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQH 456
Query: 341 FHRMLTDIKISGGLNEKFH--SEFVKTN-EIDLGIHFSINILQAGSWPLGPTVISSFSVP 397
ML D+ S +++KF SE N ++ + I S I+ + WP T + +P
Sbjct: 457 CEVMLRDVIHSLDIDKKFEDMSERSAGNYDVPI-IPISACIISSHYWPKLETEKTEALMP 515
Query: 398 QELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEK 457
Q L+ + ++++ Y RKL WL ++ VE+ ++ T+ +L LF +
Sbjct: 516 QPLQAAMDVYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLE 575
Query: 458 NDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDT 501
+ T ++ + +S + + LV+ + N ++ DT
Sbjct: 576 KETWTTAEVVEKMGMSVVVTRKRLEWLVKQGFICMNPI-ISSDT 618
>UNIPROTKB|P34514 [details] [associations]
symbol:apc-2 "Anaphase-promoting complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 GO:GO:0009792
GO:GO:0007126 GO:GO:0006898 GO:GO:0051301 GO:GO:0007067
GO:GO:0040035 GO:GO:0040039 GO:GO:0006511 KO:K03349
InterPro:IPR014786 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:FO080533 PIR:S44845
PIR:S44846 RefSeq:NP_498762.2 ProteinModelPortal:P34514 SMR:P34514
IntAct:P34514 MINT:MINT-1054240 STRING:P34514 PaxDb:P34514
EnsemblMetazoa:K06H7.6 GeneID:176139 KEGG:cel:CELE_K06H7.6
UCSC:K06H7.6 CTD:176139 WormBase:K06H7.6 eggNOG:NOG306201
HOGENOM:HOG000022396 InParanoid:P34514 OMA:HEINAEL NextBio:891294
Uniprot:P34514
Length = 731
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 285 QSITVFKYI----DDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNK 340
Q + VF + K++F K Y +LA+RL + + E+ ++ LK Y
Sbjct: 397 QGVDVFNMLVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQH 456
Query: 341 FHRMLTDIKISGGLNEKFH--SEFVKTN-EIDLGIHFSINILQAGSWPLGPTVISSFSVP 397
ML D+ S +++KF SE N ++ + I S I+ + WP T + +P
Sbjct: 457 CEVMLRDVIHSLDIDKKFEDMSERSAGNYDVPI-IPISACIISSHYWPKLETEKTEALMP 515
Query: 398 QELEKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEK 457
Q L+ + ++++ Y RKL WL ++ VE+ ++ T+ +L LF +
Sbjct: 516 QPLQAAMDVYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLE 575
Query: 458 NDAMTCGDIQTVLSLSQDQIGRHIASLVECKLLTSNKEELTEDT 501
+ T ++ + +S + + LV+ + N ++ DT
Sbjct: 576 KETWTTAEVVEKMGMSVVVTRKRLEWLVKQGFICMNPI-ISSDT 618
>UNIPROTKB|Q9UJX6 [details] [associations]
symbol:ANAPC2 "Anaphase-promoting complex subunit 2"
species:9606 "Homo sapiens" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISS] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000079 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007067 GO:GO:0007094
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0051436
GO:GO:0045773 GO:GO:0004842 GO:GO:0005680 EMBL:AF191337
EMBL:AL929554 EMBL:BC032503 EMBL:BC001579 EMBL:BC009487
EMBL:AB037827 IPI:IPI00002549 IPI:IPI00375832 RefSeq:NP_037498.1
UniGene:Hs.533262 ProteinModelPortal:Q9UJX6 SMR:Q9UJX6
DIP:DIP-32957N IntAct:Q9UJX6 MINT:MINT-1196367 STRING:Q9UJX6
PhosphoSite:Q9UJX6 DMDM:37537863 PaxDb:Q9UJX6 PRIDE:Q9UJX6
DNASU:29882 Ensembl:ENST00000323927 GeneID:29882 KEGG:hsa:29882
UCSC:uc004clq.1 UCSC:uc004clr.1 CTD:29882 GeneCards:GC09M140069
HGNC:HGNC:19989 HPA:CAB018692 MIM:606946 neXtProt:NX_Q9UJX6
PharmGKB:PA134884359 eggNOG:COG5647 HOGENOM:HOG000033936
HOVERGEN:HBG045327 InParanoid:Q9UJX6 KO:K03349 OMA:MLRGVLF
OrthoDB:EOG4T1HM4 PhylomeDB:Q9UJX6 Reactome:REACT_8017
GenomeRNAi:29882 NextBio:52411 ArrayExpress:Q9UJX6 Bgee:Q9UJX6
CleanEx:HS_ANAPC2 CleanEx:HS_APC2 Genevestigator:Q9UJX6
GermOnline:ENSG00000176248 GO:GO:0031145 GO:GO:0008054
GO:GO:0090129 GO:GO:0031915 GO:GO:0051437 GO:GO:0070979
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
Uniprot:Q9UJX6
Length = 822
Score = 140 (54.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 50/190 (26%), Positives = 80/190 (42%)
Query: 286 SITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRML 345
S+ V Y KD+F Y +LA RL+HQ S S + E + LK G + ML
Sbjct: 503 SLLVSIY-GSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVML 561
Query: 346 TDIKISGGLNEKFHSEFVKT---NEIDLGIHFSINILQAGSWPLGPTVISSFSVPQELEK 402
D+ S +N E K + G+ +++ IL + WP P VP+++
Sbjct: 562 KDMADSRRINANIREEDEKRPAEEQPPFGV-YAV-ILSSEFWP--PFKDEKLEVPEDIRA 617
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDAMT 462
+ + K Y R LSW H + V + + R V + Q ILL F+ + T
Sbjct: 618 ALEAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQDQASWT 677
Query: 463 CGDIQTVLSL 472
++ + +
Sbjct: 678 LEELSKAVKM 687
Score = 41 (19.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 497 LTEDTEIRLNLGYNNKRTKLKISGAVQKETPQEIERTVSSVDEDRKLYLQAAIVRIMKS 555
LT + L+ YN R + A+ + QE++ + D++L A + R+ K+
Sbjct: 762 LTNLESLSLDRIYNMLRMFVVTGPALAEIDLQELQGYLQKKVRDQQLVYSAGVYRLPKN 820
>FB|FBgn0002791 [details] [associations]
symbol:mr "morula" species:7227 "Drosophila melanogaster"
[GO:0000090 "mitotic anaphase" evidence=NAS] [GO:0005680
"anaphase-promoting complex" evidence=NAS;TAS;IPI] [GO:0051726
"regulation of cell cycle" evidence=TAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045886 "negative
regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 EMBL:AE013599 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0045886 GO:GO:0006511
GO:GO:0005680 KO:K03349 OMA:MLRGVLF InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GeneTree:ENSGT00390000016127
GO:GO:0050804 FlyBase:FBgn0002791 EMBL:AY129297 EMBL:BT031326
RefSeq:NP_611862.1 UniGene:Dm.759 SMR:Q9W1E5 IntAct:Q9W1E5
MINT:MINT-292405 STRING:Q9W1E5 EnsemblMetazoa:FBtr0072156
GeneID:45906 KEGG:dme:Dmel_CG3060 UCSC:CG3060-RA InParanoid:Q9W1E5
GenomeRNAi:45906 NextBio:838467 Uniprot:Q9W1E5
Length = 802
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 44/202 (21%), Positives = 83/202 (41%)
Query: 281 DKLSQSITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNK 340
D +S + ++ K++F Y ++A RL+ Q + + E + LK G +
Sbjct: 485 DIISMVVDIY---GSKELFMTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHS 541
Query: 341 FHRMLTDIKISGGLNEKFHSEFVKTNEIDLGIHFSINILQAGSWPLGPTVISSFSVPQEL 400
ML D+ S +N HS+ +T E L S I+ A WP S +P+E+
Sbjct: 542 CEVMLKDVTDSKRINAHIHSDGDRT-ENQL-FDISSLIVSAQFWPSFNK--ESLQLPEEI 597
Query: 401 EKCIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYFVTMQTFQMAILLLFEKNDA 460
E + K Y R L+W +V +++ R + + I+ F+ +
Sbjct: 598 ENEFKKYTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIYHFQTKNE 657
Query: 461 MTCGDIQTVLSLSQDQIGRHIA 482
T D+ ++ + + R ++
Sbjct: 658 WTIEDLSSITKVPASALRRRLS 679
>ZFIN|ZDB-GENE-081104-256 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit
2" species:7955 "Danio rerio" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 ZFIN:ZDB-GENE-081104-256
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 CTD:29882
eggNOG:COG5647 HOGENOM:HOG000033936 HOVERGEN:HBG045327 KO:K03349
OrthoDB:EOG4T1HM4 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:CU468929 IPI:IPI00920305 RefSeq:NP_001243675.1
UniGene:Dr.105374 Ensembl:ENSDART00000133722 GeneID:100318335
KEGG:dre:100318335 Uniprot:B8JLK0
Length = 802
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 53/201 (26%), Positives = 83/201 (41%)
Query: 286 SITVFKYIDDKDVFHKFYAKMLAKRLIHQQSTSMDGEEAMINKLKQACGYEFTNKFHRML 345
S+ V Y K++F Y +LA RL+HQ + + E + LK G + ML
Sbjct: 480 SLLVSIY-GSKEIFVNEYKTVLADRLLHQLNYNTAREIRNVELLKLRFGESHMHYCEVML 538
Query: 346 TDIKISGGLNEKFHSEFVKTN-EIDLGIHFSINILQAGSWP-LGPTVISSFSVPQE-LEK 402
D+ S +N H E + E + S I+ + WP L + +V + +E
Sbjct: 539 KDVADSRRINSNIHEEERRLPAEEQPTLPLSAMIISSEFWPQLKEEKMELPAVASKAMED 598
Query: 403 CIHMFEKFYHGQFNGRKLSWLHNISQVELKLSYLKRPYF-VTMQTFQMAILLLFEKNDAM 461
H FEK R L W + V L L R +T+ AI+L F+
Sbjct: 599 YTHRFEKLKAM----RTLRWKPQLGSVTLDLELEDRTITDLTVSPIHAAIILHFQDKGTW 654
Query: 462 TCGDIQTVLSLSQDQIGRHIA 482
T ++ VL + Q+ + R +A
Sbjct: 655 TLEELSGVLGVPQEMVRRKLA 675
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 609 599 0.00085 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 616 (65 KB)
Total size of DFA: 333 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.73u 0.14s 52.87t Elapsed: 00:00:06
Total cpu time: 52.78u 0.14s 52.92t Elapsed: 00:00:06
Start: Thu Aug 15 17:31:14 2013 End: Thu Aug 15 17:31:20 2013
WARNINGS ISSUED: 1