Query psy16238
Match_columns 123
No_of_seqs 119 out of 1039
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 16:21:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16238.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16238hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ihc_A Transcription regulator 99.7 1.7E-18 5.6E-23 121.4 3.7 65 2-68 1-65 (124)
2 2z8h_A Transcription regulator 99.7 3.6E-18 1.2E-22 121.6 3.8 64 3-68 9-72 (138)
3 3ohu_A Transcription regulator 99.7 7.1E-18 2.4E-22 117.6 4.5 65 2-68 4-68 (125)
4 3b84_A Zinc finger and BTB dom 99.7 3.4E-18 1.2E-22 119.1 1.3 58 7-66 1-58 (119)
5 2if5_A Zinc finger and BTB dom 99.7 1.1E-17 3.9E-22 115.6 3.3 59 7-67 2-60 (120)
6 1r29_A B-cell lymphoma 6 prote 99.7 1.5E-17 5.2E-22 116.2 4.0 64 3-68 2-65 (127)
7 3fkc_A Transcriptional regulat 99.7 1.2E-17 4.1E-22 116.5 2.7 61 3-65 4-64 (116)
8 1buo_A POZ domain, protein (pr 99.7 2.3E-17 7.8E-22 114.9 2.9 60 4-65 2-61 (121)
9 3ga1_A Nucleus accumbens-assoc 99.7 2.3E-17 8E-22 116.0 2.5 61 3-65 6-66 (129)
10 2ppi_A Gigaxonin; BTB domain, 99.6 3.3E-17 1.1E-21 118.3 2.7 63 2-66 19-81 (144)
11 2yy9_A Zinc finger and BTB dom 99.6 7.9E-17 2.7E-21 114.8 2.2 57 8-66 3-59 (135)
12 3i3n_A Kelch-like protein 11; 99.6 4.3E-16 1.5E-20 121.4 4.6 64 3-67 5-70 (279)
13 2vpk_A Myoneurin; transcriptio 99.6 1.9E-16 6.5E-21 109.1 1.7 54 10-65 2-55 (116)
14 2q81_A MIZ-1 protein; BTB/POZ 99.6 1.4E-16 4.9E-21 110.8 0.6 57 6-64 3-59 (119)
15 3hve_A Gigaxonin; ubiquitin, c 99.6 6.3E-16 2.2E-20 118.9 2.8 62 4-67 5-66 (256)
16 3htm_A Speckle-type POZ protei 99.4 1E-14 3.5E-19 105.0 1.0 62 4-67 8-69 (172)
17 4eoz_A Speckle-type POZ protei 99.3 4.8E-14 1.6E-18 98.9 -1.0 52 13-66 8-59 (145)
18 3m5b_A Zinc finger and BTB dom 99.3 2.6E-13 8.9E-18 95.5 2.2 52 5-60 7-58 (119)
19 2vkp_A BTB/POZ domain-containi 99.3 1.5E-13 5.1E-18 92.9 0.6 44 23-67 1-47 (109)
20 3hqi_A Speckle-type POZ protei 99.2 3.8E-12 1.3E-16 100.0 3.0 52 14-67 158-209 (312)
21 4ajy_C Transcription elongatio 97.9 3.7E-06 1.3E-10 57.2 2.5 31 32-64 3-33 (97)
22 2ast_A S-phase kinase-associat 97.5 3.5E-05 1.2E-09 56.5 2.2 30 33-64 3-32 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 96.5 0.0011 3.7E-08 47.8 2.1 30 33-64 4-33 (141)
24 2p1m_A SKP1-like protein 1A; F 95.1 0.002 6.7E-08 47.3 -1.5 31 33-65 6-36 (160)
25 2fnj_C Transcription elongatio 94.2 0.016 5.3E-07 39.3 1.4 30 33-64 3-32 (96)
26 1hv2_A Elongin C, ELC1; protei 93.5 0.022 7.5E-07 38.8 1.1 31 33-65 6-36 (99)
27 1vcb_B Protein (elongin C); tu 79.0 0.68 2.3E-05 32.1 1.2 31 32-64 18-48 (112)
28 3v7d_A Suppressor of kinetocho 77.8 0.83 2.8E-05 33.6 1.5 32 32-65 8-39 (169)
29 3drz_A BTB/POZ domain-containi 44.5 7.6 0.00026 26.1 1.1 31 33-65 8-39 (107)
30 4iao_C Regulatory protein SIR4 43.6 6.1 0.00021 29.7 0.5 13 102-114 115-127 (159)
No 1
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.72 E-value=1.7e-18 Score=121.45 Aligned_cols=65 Identities=15% Similarity=0.195 Sum_probs=57.8
Q ss_pred CCCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCCC
Q psy16238 2 SSPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPEI 68 (123)
Q Consensus 2 ~~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~~ 68 (123)
+++.+.++|..|++.+++.|++||+++.+|||+|.++ |+.|+|||+ ||||+|+||++||.+.+..
T Consensus 1 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~-vLaa~S~yF~~mf~~~~~e 65 (124)
T 2ihc_A 1 SMSVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVE-GQRFRAHRS-VLAACSSYFHSRIVGQADG 65 (124)
T ss_dssp --CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHBHHHHHHHTTC---
T ss_pred CCceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEEC-CEEEecHHH-HHHHcCHHHHHHHcCCCCC
Confidence 4578999999999999999999999999999999997 999999995 9999999999999987643
No 2
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.71 E-value=3.6e-18 Score=121.64 Aligned_cols=64 Identities=16% Similarity=0.224 Sum_probs=59.4
Q ss_pred CCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCCC
Q psy16238 3 SPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPEI 68 (123)
Q Consensus 3 ~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~~ 68 (123)
++.+.++|..|+..+++.|++||+++.+|||+|.++ |+.|+|||+ ||||+|+||++||.+.+..
T Consensus 9 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~yF~~~f~~~~~e 72 (138)
T 2z8h_A 9 SAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVE-GQRFRAHRS-VLAACSSYFHSRIVGQTDA 72 (138)
T ss_dssp TCCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHTTCCCT
T ss_pred CCeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEEC-CEEEechHH-HHHHcCHHHHHHHhcCCCC
Confidence 367899999999999999999999999999999997 999999995 9999999999999987654
No 3
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.70 E-value=7.1e-18 Score=117.62 Aligned_cols=65 Identities=25% Similarity=0.286 Sum_probs=60.1
Q ss_pred CCCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCCC
Q psy16238 2 SSPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPEI 68 (123)
Q Consensus 2 ~~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~~ 68 (123)
+++.+.+.|..|...+++.|++||+++.+|||+|.++ |+.|+|||. |||++|+||++||.+.+..
T Consensus 4 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~yF~~~f~~~~~e 68 (125)
T 3ohu_A 4 GSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVE-RKEFRAHRA-VLAACSEYFWQALVGQTKN 68 (125)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHBHHHHHHHTTCCCS
T ss_pred CCcceeeecHHHHHHHHHHHHHHHhcCCccceEEEEC-CEEEechHH-HHHHcCHHHHHHhcCCCCC
Confidence 3577899999999999999999999999999999997 999999995 9999999999999987654
No 4
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.69 E-value=3.4e-18 Score=119.07 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=54.1
Q ss_pred eeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCC
Q psy16238 7 SLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGP 66 (123)
Q Consensus 7 ~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p 66 (123)
+++|++|...+++.|++||+++.+|||+|.++ |+.|+|||+ |||++|+||++||.+++
T Consensus 1 s~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~yF~~~f~~~~ 58 (119)
T 3b84_A 1 SMSFVQHSVRVLQELNKQREKGQYCDATLDVG-GLVFKAHWS-VLACCSHFFQSLYGDGS 58 (119)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHTTTT
T ss_pred CcccchHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEEeeHH-HHhhcCHHHHHHHCCCC
Confidence 46899999999999999999999999999997 999999995 99999999999999865
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.68 E-value=1.1e-17 Score=115.56 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=53.7
Q ss_pred eeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCC
Q psy16238 7 SLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPE 67 (123)
Q Consensus 7 ~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~ 67 (123)
.++|+.|.+.+++.|+++|.++.+|||+|.++ |+.|+|||+ |||++|+||++||.+.+.
T Consensus 2 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~-vLaa~S~~F~~~f~~~~~ 60 (120)
T 2if5_A 2 GIPFPDHSSDILSGLNEQRTQGLLCDVVILVE-GREFPTHRS-VLAACSQYFKKLFTSGAV 60 (120)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHHC---
T ss_pred CcCccchHHHHHHHHHHHHhcCCCCCeEEEEC-CEEEeHHHH-HHHHhCHHHHHHhcCCcc
Confidence 57899999999999999999999999999997 999999995 999999999999997653
No 6
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.68 E-value=1.5e-17 Score=116.21 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=57.3
Q ss_pred CCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCCC
Q psy16238 3 SPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPEI 68 (123)
Q Consensus 3 ~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~~ 68 (123)
++.+.++|..|.+.+++.|++||.++.+|||+|.++ |+.|+|||+ |||++|+||++||.+.+..
T Consensus 2 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~-iLaa~S~~F~~~f~~~~~e 65 (127)
T 1r29_A 2 SADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVS-REQFRAHKT-VLMACSGLFYSIFTDQLKR 65 (127)
T ss_dssp ---CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHTSTTTT
T ss_pred CCCccccchhHHHHHHHHHHHHHhcCCCCCEEEEEC-CEEEehHHH-HHHHhCHHHHHHhcCCccC
Confidence 467789999999999999999999999999999997 999999995 9999999999999986543
No 7
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.67 E-value=1.2e-17 Score=116.54 Aligned_cols=61 Identities=20% Similarity=0.047 Sum_probs=57.8
Q ss_pred CCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 3 SPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 3 ~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
++.+.+.|.+|+..+++.|+++|.++.+|||+|.++ |+.|+|||. |||+||+||++||.+.
T Consensus 4 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~~F~~~f~~~ 64 (116)
T 3fkc_A 4 RKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVE-DRKFRAHKN-ILSASSTYFHQLFSVA 64 (116)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEET-TEEEEECHH-HHHHHCHHHHHHTTSC
T ss_pred CceeeecCccHHHHHHHHHHHHHhcCCceeEEEEEC-CEEEehhHH-HHHHcCHHHHHHHcCC
Confidence 478899999999999999999999999999999997 999999995 9999999999999975
No 8
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.66 E-value=2.3e-17 Score=114.94 Aligned_cols=60 Identities=18% Similarity=0.067 Sum_probs=56.3
Q ss_pred CceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 4 PHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 4 ~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
+.+.++|+.|++.+++.|+++|.++.+|||+|.++ |+.|+|||+ |||++|+||++||.+.
T Consensus 2 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~yF~~~f~~~ 61 (121)
T 1buo_A 2 GMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVD-SQEFHAHRT-VLACTSKMFEILFHRN 61 (121)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEES-SCEEEECHH-HHHHHCHHHHHHTTSC
T ss_pred CceeccCcchHHHHHHHHHHHHhcCCCCCEEEEEC-CEEEehhHH-HHhhcCHHHHHHHcCC
Confidence 45789999999999999999999999999999997 999999995 9999999999999874
No 9
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.65 E-value=2.3e-17 Score=116.01 Aligned_cols=61 Identities=15% Similarity=0.136 Sum_probs=57.6
Q ss_pred CCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 3 SPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 3 ~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
++.+.++|+.|...++..|+++|+++.+|||+|.++ |+.|+|||+ |||++|+||++||.+.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~~Hk~-vLaa~S~~F~~~f~~~ 66 (129)
T 3ga1_A 6 AQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVK-GHAFKAHRA-VLAASSSYFRDLFNNS 66 (129)
T ss_dssp -CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEET-TEEEEECHH-HHHHHBHHHHHHHHHC
T ss_pred CceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEEehHH-HHHHcCHHHHHHHcCC
Confidence 578999999999999999999999999999999997 999999995 9999999999999976
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.65 E-value=3.3e-17 Score=118.26 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=56.6
Q ss_pred CCCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCC
Q psy16238 2 SSPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGP 66 (123)
Q Consensus 2 ~~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p 66 (123)
..+.+.++|+.|...+++.|++||+++.+|||+|.++ |+.|+|||+ ||||+|+||++||.+.+
T Consensus 19 ~~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~yF~~mf~~~~ 81 (144)
T 2ppi_A 19 YFQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLD-GEEIPVQKN-ILAAASPYIRTKLNYNP 81 (144)
T ss_dssp CCCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHHHCC
T ss_pred eeeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEEC-CEEEehHHH-HHHHcCHHHHHHHcCCC
Confidence 4577899999999999999999999999999999997 999999995 99999999999998754
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.62 E-value=7.9e-17 Score=114.77 Aligned_cols=57 Identities=18% Similarity=0.119 Sum_probs=48.7
Q ss_pred eecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCC
Q psy16238 8 LRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGP 66 (123)
Q Consensus 8 l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p 66 (123)
-.|..|...+++.|++||+++.+|||+|.++ |+.|+|||+ |||++|+||++||.+.+
T Consensus 3 s~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~-vLaa~S~yF~~mf~~~~ 59 (135)
T 2yy9_A 3 SGSSGHSVRVLQELNKQREKGQYCDATLDVG-GLVFKAHWS-VLACCSHFFQRIYGDGT 59 (135)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCCEEEEET-TEEEEECHH-HHHHHCHHHHHTCC---
T ss_pred CccccHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEehHHH-HHHHhCHHHHHHHcCCC
Confidence 3678999999999999999999999999997 999999995 99999999999999765
No 12
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.60 E-value=4.3e-16 Score=121.44 Aligned_cols=64 Identities=14% Similarity=-0.002 Sum_probs=55.6
Q ss_pred CCceeeecCCcHHHHHHHHHHHhhcCCCccEEEecC--CCceEecccceeeecCCcchHHhhcCCCC
Q psy16238 3 SPHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARP--RRRSGEACGAQDLSKCPAGSPDAFIDGPE 67 (123)
Q Consensus 3 ~~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~--dg~~f~AHKv~VLAA~S~YFr~mF~~~p~ 67 (123)
+..+.+.|..|+..++..|++||.++.+|||+|.++ +|+.|+|||+ |||++|+||++||.+++.
T Consensus 5 ~~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~-vLaa~S~yF~~mf~~~~~ 70 (279)
T 3i3n_A 5 MEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRS-VLAAATEYFTPLLSGQFS 70 (279)
T ss_dssp CCEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHH-HHHHHCTTSGGGCCC---
T ss_pred ccccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHH-HHHHcCHHHHHHhcCCCc
Confidence 456889999999999999999999999999999995 3899999995 999999999999998654
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.59 E-value=1.9e-16 Score=109.07 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=50.7
Q ss_pred cCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 10 WNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 10 w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
+.+|+..+++.|++||.++.+|||+|.++ |+.|+|||. |||++|+||++||.+.
T Consensus 2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~-vLaa~S~yF~~~f~~~ 55 (116)
T 2vpk_A 2 MSHHCEHLLERLNKQREAGFLCDCTIVIG-EFQFKAHRN-VLASFSEYFGAIYRST 55 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHHHhcCCCCcEEEEEC-CEEEeccHH-HHhhcCHHHHHHHcCC
Confidence 45789999999999999999999999997 999999995 9999999999999976
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.59 E-value=1.4e-16 Score=110.84 Aligned_cols=57 Identities=23% Similarity=0.243 Sum_probs=52.4
Q ss_pred eeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcC
Q psy16238 6 YSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFID 64 (123)
Q Consensus 6 ~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~ 64 (123)
..+.|+.|...+++.|++||+++.+|||+|.++ |+.|+|||+ |||++|+||++||.+
T Consensus 3 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~-vLaa~S~yF~~~f~~ 59 (119)
T 2q81_A 3 LGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVD-GVHFKAHKA-VLAACSEYFKMLFVD 59 (119)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEehhHH-HHHHcCHHHHHHHcC
Confidence 346788999999999999999999999999997 999999995 999999999999986
No 15
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.57 E-value=6.3e-16 Score=118.90 Aligned_cols=62 Identities=15% Similarity=0.090 Sum_probs=48.7
Q ss_pred CceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCC
Q psy16238 4 PHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPE 67 (123)
Q Consensus 4 ~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~ 67 (123)
..+.+.++.|+..++..|++||.++.+|||+|.++ |+.|+|||+ |||++|+||++||.+++.
T Consensus 5 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~~Hr~-vLaa~S~yF~~mf~~~~~ 66 (256)
T 3hve_A 5 EGSAVSDPQHAARLLRALSSFREESRFCDAHLVLD-GEEIPVQKN-ILAAASPYIRTKLNYNPP 66 (256)
T ss_dssp -----CCTTTHHHHHHHHHTCCC--CCCCEEEEET-TEEEEECHH-HHHTTCHHHHHTC-----
T ss_pred CCCccCChHHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEechHH-HHHHcCHHHHHHhCCCCC
Confidence 44778899999999999999999999999999997 999999995 999999999999997653
No 16
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.45 E-value=1e-14 Score=105.01 Aligned_cols=62 Identities=16% Similarity=0.072 Sum_probs=52.2
Q ss_pred CceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCC
Q psy16238 4 PHYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPE 67 (123)
Q Consensus 4 ~~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~ 67 (123)
+.....+..+++.++..|+++++++.+|||+|.++ |+.|+|||. |||++|+||++||.+.+.
T Consensus 8 ~~~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~~Hk~-iL~~~S~~F~~~f~~~~~ 69 (172)
T 3htm_A 8 QNTMNMVKVPECRLADELGGLWENSRFTDCCLCVA-GQEFQAHKA-ILAARSPVFSAMFEHEME 69 (172)
T ss_dssp ----CCSCCCCCCHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHHSCCC
T ss_pred ccccccCCCCHHHHHHHHHHHHhCCCCcceEEEEC-CEEEEeeHH-HHHHcCHHHHHHHccCcc
Confidence 33444566677889999999999999999999997 999999995 999999999999997643
No 17
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.35 E-value=4.8e-14 Score=98.94 Aligned_cols=52 Identities=17% Similarity=0.133 Sum_probs=47.5
Q ss_pred cHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCC
Q psy16238 13 HQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGP 66 (123)
Q Consensus 13 h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p 66 (123)
.++.++..|+++++++.+|||+|.++ |+.|+|||. |||++|+||++||.+..
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~~Hk~-iL~~~S~~F~~~f~~~~ 59 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVA-GQEFQAHKA-ILAARSPVFSAMFEHEM 59 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEET-TEEEEECHH-HHHHHCHHHHHHHHSSS
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEEC-CEEEEeehH-HHHHcCHHHHHHHcCCC
Confidence 45568999999999999999999997 999999995 99999999999999764
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.34 E-value=2.6e-13 Score=95.51 Aligned_cols=52 Identities=12% Similarity=-0.036 Sum_probs=44.8
Q ss_pred ceeeecCCcHHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHH
Q psy16238 5 HYSLRWNNHQSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPD 60 (123)
Q Consensus 5 ~~~l~w~~h~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~ 60 (123)
-.....+.|+..++..|+ |.++.||||||.++ |+.|+||| +||||||+||++
T Consensus 7 p~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~-~~~f~aHk-~vLaa~S~yF~~ 58 (119)
T 3m5b_A 7 PIRLPSPYGSDRLVQLAA--RLRPALCDTLITVG-SQEFPAHS-LVLAGVSQQLGR 58 (119)
T ss_dssp CEEECCTTTTCHHHHHHH--HHTTTTCCEEEEET-TEEEEECH-HHHHTTCGGGCC
T ss_pred CCCCCCCcchHHHHHHHH--HhcCCCcceEEEEC-CEEEeeEH-HHHHHcCHHHhc
Confidence 344556678889999997 77899999999997 99999999 599999999985
No 19
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.33 E-value=1.5e-13 Score=92.91 Aligned_cols=44 Identities=20% Similarity=0.119 Sum_probs=36.3
Q ss_pred HHhhcCCCccEEEecCCC---ceEecccceeeecCCcchHHhhcCCCC
Q psy16238 23 SLLQNETLVDVTLARPRR---RSGEACGAQDLSKCPAGSPDAFIDGPE 67 (123)
Q Consensus 23 ~LR~~~~l~DVtL~v~dg---~~f~AHKv~VLAA~S~YFr~mF~~~p~ 67 (123)
+|++++.+|||+|.++|| +.|+|||. |||++|+||++||.+.+.
T Consensus 1 ~l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~-iLa~~S~~F~~~f~~~~~ 47 (109)
T 2vkp_A 1 SMFNNELMADVHFVVGPPGATRTVPAHKY-VLAVGSSVFYAMFYGDLA 47 (109)
T ss_dssp CCTTCCTTCCEEEEESSTTSCEEEEECHH-HHHHHCHHHHHHHC----
T ss_pred CcccCCCcccEEEEECCCCCcEEEEeeHH-HHHHcCHHHHHHhcCCcc
Confidence 368899999999999743 89999995 999999999999997654
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.21 E-value=3.8e-12 Score=100.05 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhcCCCccEEEecCCCceEecccceeeecCCcchHHhhcCCCC
Q psy16238 14 QSHLLNAFDSLLQNETLVDVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDGPE 67 (123)
Q Consensus 14 ~s~ll~~L~~LR~~~~l~DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~p~ 67 (123)
++.+...|++|+.++.++||+|.++ |+.|+||| +||||+||||++||.+...
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~~Hk-~vLaa~S~~F~~~f~~~~~ 209 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCVA-GQEFQAHK-AILAARSPVFSAMFEHEME 209 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEET-TEEEEECH-HHHHHHCHHHHHHTTC---
T ss_pred CchHHHHHHHHHhCCCCCceEEEEC-CEEEeHHH-HHHHHcCHHHHHHhccCcc
Confidence 3468899999999999999999997 99999999 5999999999999997643
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.94 E-value=3.7e-06 Score=57.18 Aligned_cols=31 Identities=6% Similarity=-0.130 Sum_probs=27.8
Q ss_pred cEEEecCCCceEecccceeeecCCcchHHhhcC
Q psy16238 32 DVTLARPRRRSGEACGAQDLSKCPAGSPDAFID 64 (123)
Q Consensus 32 DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~ 64 (123)
-|+|...||++|++||. | |++|+||++||.+
T Consensus 3 ~v~L~SsDg~~F~v~r~-v-A~~S~~ik~m~~~ 33 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKRE-H-ALTSGTIKAMLSG 33 (97)
T ss_dssp EEEEECTTCCEEEEEHH-H-HTTSHHHHHHHCC
T ss_pred EEEEEecCCcEEEecHH-H-HHHhHHHHHHHHh
Confidence 37888877999999995 8 9999999999986
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=97.51 E-value=3.5e-05 Score=56.45 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=27.1
Q ss_pred EEEecCCCceEecccceeeecCCcchHHhhcC
Q psy16238 33 VTLARPRRRSGEACGAQDLSKCPAGSPDAFID 64 (123)
Q Consensus 33 VtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~ 64 (123)
|+|.+.||+.|++||. | |+||+||++||.+
T Consensus 3 v~L~ssDg~~f~v~~~-v-A~~S~~i~~m~~~ 32 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVE-I-AKQSVTIKTMLED 32 (159)
T ss_dssp EEEECTTSCEEEEEHH-H-HHTCHHHHHHTTS
T ss_pred EEEEcCCCCEEEeCHH-H-HHHhHHHHHHHHh
Confidence 8888767999999995 7 9999999999987
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.49 E-value=0.0011 Score=47.80 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=27.2
Q ss_pred EEEecCCCceEecccceeeecCCcchHHhhcC
Q psy16238 33 VTLARPRRRSGEACGAQDLSKCPAGSPDAFID 64 (123)
Q Consensus 33 VtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~ 64 (123)
|+|.+.||+.|.+|+. | |.+|+||++||.+
T Consensus 4 v~L~SsDg~~f~v~~~-v-A~~S~~ik~ml~~ 33 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVE-I-AKQSVTIKTMLED 33 (141)
T ss_dssp EEEECTTSCEEEEEGG-G-GGTCHHHHHHHHH
T ss_pred EEEEeCCCCEEEecHH-H-HHHhHHHHHHHHh
Confidence 7888877999999995 7 8999999999986
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=95.10 E-value=0.002 Score=47.31 Aligned_cols=31 Identities=16% Similarity=-0.020 Sum_probs=12.4
Q ss_pred EEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 33 VTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 33 VtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
|+|.+.||+.|.+|+. | |.+|+||+.||.+.
T Consensus 6 v~L~SsDg~~f~v~~~-v-A~~S~~ik~ml~~~ 36 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEA-V-ALESQTIAHMVEDD 36 (160)
T ss_dssp --CCC---------CH-H-HHTCTTTC------
T ss_pred EEEEcCCCCEEEECHH-H-HHHhHHHHHHHHcc
Confidence 7888767999999995 7 89999999999864
No 25
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=94.21 E-value=0.016 Score=39.27 Aligned_cols=30 Identities=7% Similarity=-0.104 Sum_probs=26.7
Q ss_pred EEEecCCCceEecccceeeecCCcchHHhhcC
Q psy16238 33 VTLARPRRRSGEACGAQDLSKCPAGSPDAFID 64 (123)
Q Consensus 33 VtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~ 64 (123)
|+|...||..|.+++. + |.+|.+++.||.+
T Consensus 3 v~L~SsDg~~f~V~~~-~-A~~S~~ik~ml~~ 32 (96)
T 2fnj_C 3 VKLISSDGHEFIVKRE-H-ALTSGTIKAMLSG 32 (96)
T ss_dssp EEEECTTSCEEEEEHH-H-HTTSHHHHHHHHC
T ss_pred EEEEecCCCEEEeCHH-H-HHHhHHHHHHHHc
Confidence 7888877999999994 5 8999999999986
No 26
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=93.48 E-value=0.022 Score=38.80 Aligned_cols=31 Identities=13% Similarity=0.019 Sum_probs=27.3
Q ss_pred EEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 33 VTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 33 VtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
|+|...||+.|.+++. | |.+|.+++.||.++
T Consensus 6 v~L~SsDg~~f~V~~~-v-A~~S~~ik~ml~~~ 36 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRS-A-AMISPTLKAMIEGP 36 (99)
T ss_dssp EEEEETTTEEEEEEHH-H-HTTCHHHHHHHHSS
T ss_pred EEEEecCCCEEEECHH-H-HHHhHHHHHHHhcc
Confidence 7888877999999994 5 99999999999873
No 27
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=78.96 E-value=0.68 Score=32.11 Aligned_cols=31 Identities=6% Similarity=-0.126 Sum_probs=26.9
Q ss_pred cEEEecCCCceEecccceeeecCCcchHHhhcC
Q psy16238 32 DVTLARPRRRSGEACGAQDLSKCPAGSPDAFID 64 (123)
Q Consensus 32 DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~ 64 (123)
-|+|...||..|.+.+ -.|.+|.+++.|+.+
T Consensus 18 ~v~L~SsDG~~F~V~~--~~A~~S~tIk~ml~~ 48 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKR--EHALTSGTIKAMLSG 48 (112)
T ss_dssp EEEEECTTSCEEEEEH--HHHHTSHHHHHHSSC
T ss_pred EEEEEcCCCCEEEECH--HHHHHhHHHHHHHHh
Confidence 4789877899999999 368899999999985
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=77.85 E-value=0.83 Score=33.62 Aligned_cols=32 Identities=9% Similarity=-0.139 Sum_probs=27.4
Q ss_pred cEEEecCCCceEecccceeeecCCcchHHhhcCC
Q psy16238 32 DVTLARPRRRSGEACGAQDLSKCPAGSPDAFIDG 65 (123)
Q Consensus 32 DVtL~v~dg~~f~AHKv~VLAA~S~YFr~mF~~~ 65 (123)
-|+|...||+.|.+++. | |.+|.+++.|+.+.
T Consensus 8 ~i~L~SsDG~~F~V~~~-v-A~~S~tIk~ml~~~ 39 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKK-I-AERSLLLKNYLNDM 39 (169)
T ss_dssp EEEEECTTCCEEEEEHH-H-HTTSHHHHHHHHC-
T ss_pred eEEEEeCCCCEEEecHH-H-HHHhHHHHHHHHhc
Confidence 58898888999999994 5 88999999999853
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=44.52 E-value=7.6 Score=26.09 Aligned_cols=31 Identities=13% Similarity=-0.120 Sum_probs=25.8
Q ss_pred EEEecCCCceEecccceeeecCC-cchHHhhcCC
Q psy16238 33 VTLARPRRRSGEACGAQDLSKCP-AGSPDAFIDG 65 (123)
Q Consensus 33 VtL~v~dg~~f~AHKv~VLAA~S-~YFr~mF~~~ 65 (123)
|+|.|+ |+.|...+. .|+... .+|..||.+.
T Consensus 8 v~LNVG-G~~f~t~~~-TL~~~p~s~L~~~~~~~ 39 (107)
T 3drz_A 8 VRLNVG-GTYFLTTRQ-TLCRDPKSFLYRLCQAD 39 (107)
T ss_dssp EEEEET-TEEEEEEHH-HHTSSTTSHHHHHHTTC
T ss_pred EEEEEC-CEEEEECHH-HHhcCCCcchhHHHhcC
Confidence 578897 999999995 999886 5688998764
No 30
>4iao_C Regulatory protein SIR4; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=43.65 E-value=6.1 Score=29.67 Aligned_cols=13 Identities=46% Similarity=0.769 Sum_probs=11.2
Q ss_pred CCCCCCCcchhhh
Q psy16238 102 TPNSSPTNNICNE 114 (123)
Q Consensus 102 ~~~~~~~~~~~~~ 114 (123)
.|+.|-|||||+-
T Consensus 115 dp~VSvTNNICSv 127 (159)
T 4iao_C 115 NPLTSVTNDICSV 127 (159)
T ss_dssp CTTCBTTTTSSCT
T ss_pred CCccccccccccc
Confidence 5788999999974
Done!