BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16240
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24524|SING_DROME Protein singed OS=Drosophila melanogaster GN=sn PE=3 SV=1
Length = 512
Score = 228 bits (580), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%), Gaps = 4/177 (2%)
Query: 110 PSKFKIYSVPLSFLS--SGVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLET 167
P I + L ++S GVDVTANQ+E+ ++ETFQLE+D S RW +RT QDRYW L
Sbjct: 275 PQASFIAGLNLRYVSVKQGVDVTANQDEVGENETFQLEYDWSAHRWALRTTQDRYWCLSA 334
Query: 168 GGGIQASGDKKSSNALYDLVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYF 227
GGGIQA+G+++ ++AL++L+W GDGS++ RANNGKF+ATKRSGHL+A S+S ++ ++YF
Sbjct: 335 GGGIQATGNRRCADALFELIWHGDGSLSFRANNGKFLATKRSGHLFATSESIEEIAKFYF 394
Query: 228 YLINRPILVLKCEQGFVGFKTGANNSLRLECNKANYETIQVERADRGVVYFKGKSAR 284
YLINRPILVLKCEQGFVG++T N L+LECNKA YETI VERA +G+V+ K S +
Sbjct: 395 YLINRPILVLKCEQGFVGYRTPGN--LKLECNKATYETILVERAQKGLVHLKAHSGK 449
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 12 PKYATVSLFPLSFLS--SGVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLET 69
P+ + ++ L ++S GVDVTANQ+E+ ++ETFQLE+D S RW +RT QDRYW L
Sbjct: 275 PQASFIAGLNLRYVSVKQGVDVTANQDEVGENETFQLEYDWSAHRWALRTTQDRYWCLSA 334
Query: 70 GGGM 73
GGG+
Sbjct: 335 GGGI 338
>sp|Q16658|FSCN1_HUMAN Fascin OS=Homo sapiens GN=FSCN1 PE=1 SV=3
Length = 493
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 96/147 (65%), Gaps = 4/147 (2%)
Query: 126 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYD 185
G+D++ANQ+E +D ETFQLE D TK+ RT +YWTL GG+Q++ K+++ +D
Sbjct: 278 GMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFD 337
Query: 186 LVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVG 245
+ W+ D + LRA+NGKF+ +K++G L A+ ++A DS + LINRPI+V + E GF+G
Sbjct: 338 IEWR-DRRITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIG 396
Query: 246 FKTGANNSLRLECNKANYETIQVERAD 272
+ L+ N+++Y+ Q+E D
Sbjct: 397 CRKVTGT---LDANRSSYDVFQLEFND 420
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 28 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGMIEEESRLFSNPSKV 87
G+D++ANQ+E +D ETFQLE D TK+ RT +YWTL GG+ +S S +
Sbjct: 278 GMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGV---QSTASSKNASC 334
Query: 88 RTVLQYLEVKI--QYFYGLYCTDKPSK----------------FKIYSVPL-------SF 122
+++ + +I + G + T K + K+ + P+ F
Sbjct: 335 YFDIEWRDRRITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEHGF 394
Query: 123 LSSGVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGD 176
+ S ++ FQLEF+ + I+ +YWT+ + + +SGD
Sbjct: 395 IGCRKVTGTLDANRSSYDVFQLEFNDGA--YNIKDSTGKYWTVGSDSAVTSSGD 446
>sp|Q61553|FSCN1_MOUSE Fascin OS=Mus musculus GN=Fscn1 PE=1 SV=4
Length = 493
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 126 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYD 185
G+D++ANQ+E +D ETFQLE D T++ RT +YWTL GG+Q++ K+++ +D
Sbjct: 278 GMDLSANQDEETDQETFQLEIDRDTRKCAFRTHTGKYWTLTATGGVQSTASTKNASCYFD 337
Query: 186 LVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVG 245
+ W D + LRA+NGKF+ K++G L A+ ++A DS + LINRPI+V + E GF+G
Sbjct: 338 IEW-CDRRITLRASNGKFVTAKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIG 396
Query: 246 FKTGANNSLRLECNKANYETIQVERAD 272
+ L+ N+++Y+ Q+E D
Sbjct: 397 CRKVTGT---LDANRSSYDVFQLEFND 420
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 28 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGM 73
G+D++ANQ+E +D ETFQLE D T++ RT +YWTL GG+
Sbjct: 278 GMDLSANQDEETDQETFQLEIDRDTRKCAFRTHTGKYWTLTATGGV 323
>sp|P85845|FSCN1_RAT Fascin OS=Rattus norvegicus GN=Fscn1 PE=1 SV=2
Length = 493
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 93/147 (63%), Gaps = 4/147 (2%)
Query: 126 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYD 185
G+D++ANQ+E +D ETFQLE D T++ RT +YWTL GG+Q++ K+++ +D
Sbjct: 278 GMDLSANQDEETDQETFQLEIDRDTRKCAFRTHTGKYWTLTATGGVQSTASTKNASCYFD 337
Query: 186 LVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVG 245
+ W + + LRA+NGKF+ K++G L A ++A DS + LINRPI+V + E GF+G
Sbjct: 338 IEW-CERRITLRASNGKFVTAKKNGQLAATVETAGDSELFLMKLINRPIIVFRGEHGFIG 396
Query: 246 FKTGANNSLRLECNKANYETIQVERAD 272
+ L+ N+++Y+ Q+E D
Sbjct: 397 CRKVTGT---LDANRSSYDVFQLEFND 420
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 28 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGM 73
G+D++ANQ+E +D ETFQLE D T++ RT +YWTL GG+
Sbjct: 278 GMDLSANQDEETDQETFQLEIDRDTRKCAFRTHTGKYWTLTATGGV 323
>sp|O18728|FSCN2_BOVIN Fascin-2 OS=Bos taurus GN=FSCN2 PE=2 SV=1
Length = 492
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 96/158 (60%), Gaps = 5/158 (3%)
Query: 126 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYD 185
GV+V+ANQ+E DHETF ++ D TK+ + YWTL T GGIQA+ + S N +++
Sbjct: 276 GVNVSANQDEELDHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIQATATQVSENTMFE 335
Query: 186 LVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVG 245
+ W+G VAL+A+NG+++ K++G L A SD + + LINRPILVL+ GFV
Sbjct: 336 MEWRGR-RVALKASNGRYVCMKKNGQLAAISDFVGEDEEFTLKLINRPILVLRGLDGFVC 394
Query: 246 FKTGANNSLRLECNKANYETIQVERADRGVVYFKGKSA 283
+ G+N +L+ N++ Y+ + +D G +G+
Sbjct: 395 HRRGSN---QLDTNRSVYDVFHLSFSD-GAYQIRGRGG 428
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 28 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGG------------MIE 75
GV+V+ANQ+E DHETF ++ D TK+ + YWTL T GG M E
Sbjct: 276 GVNVSANQDEELDHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIQATATQVSENTMFE 335
Query: 76 EE---SRLFSNPSKVRTVLQYLEVKIQYFYGLYCTDKPSKFKIYSVPLSFLSSGVD---- 128
E R+ S R V ++ D+ K+ + P+ L G+D
Sbjct: 336 MEWRGRRVALKASNGRYVCMKKNGQLAAISDFVGEDEEFTLKLINRPILVL-RGLDGFVC 394
Query: 129 --VTANQEEI--SDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALY 184
+NQ + S ++ F L F S + IR +W + G + + G+ ++ + L+
Sbjct: 395 HRRGSNQLDTNRSVYDVFHLSF--SDGAYQIRGRGGGFWHTGSHGSVCSDGE-RAEDFLF 451
Query: 185 DLVWQGDGSVALRANNGKFIATKRSGHLYANSDS 218
+ ++ G +A+RA +GK++ SG L A++D+
Sbjct: 452 E--FRERGRLAIRARSGKYLRGGASGLLRADADA 483
>sp|Q32M02|FSCN2_MOUSE Fascin-2 OS=Mus musculus GN=Fscn2 PE=2 SV=1
Length = 492
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 126 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYD 185
G++V+ANQ+E HETF ++ D TK+ + YWTL T GGIQA+ + S+N +++
Sbjct: 276 GINVSANQDEELGHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIQATATQVSANTMFE 335
Query: 186 LVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVG 245
+ W G VAL+A+NG+F+ K++G L A SD + + LINRP+LVL+ GFV
Sbjct: 336 IEWHGR-RVALKASNGRFVCMKKNGQLAAISDFVGEDELFTLKLINRPLLVLRGLDGFVC 394
Query: 246 FKTGANNSLRLECNKANYETIQVERADRGVVYFKGKSA 283
+ G+N +L+ N++ Y+ + D G +G+
Sbjct: 395 HRRGSN---QLDTNRSTYDVFHLSFRD-GAYQIRGRGG 428
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 28 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGMIEEESRLFSN---- 83
G++V+ANQ+E HETF ++ D TK+ + YWTL T GG+ +++ +N
Sbjct: 276 GINVSANQDEELGHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIQATATQVSANTMFE 335
Query: 84 -----------PSKVRTVLQYLEVKIQYFYGLYCTDKPSKFKIYSVPLSFLSSGVD---- 128
S R V ++ D+ K+ + PL L G+D
Sbjct: 336 IEWHGRRVALKASNGRFVCMKKNGQLAAISDFVGEDELFTLKLINRPLLVL-RGLDGFVC 394
Query: 129 --VTANQEEI--SDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALY 184
+NQ + S ++ F L F + IR +W + G + + GD + + L+
Sbjct: 395 HRRGSNQLDTNRSTYDVFHLSFRDGA--YQIRGRGGGFWYTGSHGSVCSDGD-LAEDFLF 451
Query: 185 DLVWQGDGSVALRANNGKFIATKRSGHLYANSD 217
+ ++ G +A+RA +GK++ SG L A++D
Sbjct: 452 E--FRERGRLAIRALSGKYLRGGASGLLRADAD 482
>sp|O14926|FSCN2_HUMAN Fascin-2 OS=Homo sapiens GN=FSCN2 PE=1 SV=1
Length = 492
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 126 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYD 185
GV+V+ANQ++ DHETF ++ D TK+ + YWTL T GGI A+ + S+N +++
Sbjct: 276 GVNVSANQDDELDHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIHATATQVSANTMFE 335
Query: 186 LVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVG 245
+ W+G VAL+A+NG+++ K++G L A SD + LINRPILVL+ GFV
Sbjct: 336 MEWRGR-RVALKASNGRYVCMKKNGQLAAISDFVGKDEEFTLKLINRPILVLRGLDGFVC 394
Query: 246 FKTGANNSLRLECNKANYETIQVERADRGVVYFKGK 281
G+N +L+ N++ Y+ + +D G +G+
Sbjct: 395 HHRGSN---QLDTNRSVYDVFHLSFSD-GAYRIRGR 426
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 28 GVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGG------------MIE 75
GV+V+ANQ++ DHETF ++ D TK+ + YWTL T GG M E
Sbjct: 276 GVNVSANQDDELDHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIHATATQVSANTMFE 335
Query: 76 EE---SRLFSNPSKVRTVLQYLEVKIQYFYGLYCTDKPSKFKIYSVPLSFLSSGVD---- 128
E R+ S R V ++ D+ K+ + P+ L G+D
Sbjct: 336 MEWRGRRVALKASNGRYVCMKKNGQLAAISDFVGKDEEFTLKLINRPILVL-RGLDGFVC 394
Query: 129 --VTANQEEI--SDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALY 184
+NQ + S ++ F L F R IR +W + G + + G++ +
Sbjct: 395 HHRGSNQLDTNRSVYDVFHLSFSDGAYR--IRGRDGGFWYTGSHGSVCSDGERAED---F 449
Query: 185 DLVWQGDGSVALRANNGKFIATKRSGHLYANSDS 218
++ G +A+RA +GK++ SG L A++D+
Sbjct: 450 VFEFRERGRLAIRARSGKYLRGGASGLLRADADA 483
>sp|Q91837|FASC_XENLA Fascin OS=Xenopus laevis GN=fscn PE=2 SV=1
Length = 483
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 130 TANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYDLVWQ 189
+ANQ+E SD ETFQLE + TK RT +YWTL + GGIQAS +S+ +++ W
Sbjct: 273 SANQDEESDQETFQLEINKDTKMCAFRTHTGKYWTLSSNGGIQASASTLNSSCYFEIDWC 332
Query: 190 GDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVGFKTG 249
D + L+ NGK++ K++G L A+ D+ ++ + LINRP++VL+ E GF+G +
Sbjct: 333 -DRRITLKGVNGKYVTAKKNGQLSASVDTPGETELFLMKLINRPLIVLRGEHGFIGCRKM 391
Query: 250 ANNSLRLECNKANYETIQVERAD 272
L+ N++ Y+ ++E D
Sbjct: 392 TGT---LDSNRSIYDVFELEFND 411
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 45/221 (20%)
Query: 32 TANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGMIEEESRLFSNPSKVRTVL 91
+ANQ+E SD ETFQLE + TK RT +YWTL + GG+ S L S+
Sbjct: 273 SANQDEESDQETFQLEINKDTKMCAFRTHTGKYWTLSSNGGIQASASTLNSSC------- 325
Query: 92 QYLEVK-------IQYFYGLYCT-----------DKPSKFKIYSVPL------------S 121
Y E+ ++ G Y T D P + +++ + L
Sbjct: 326 -YFEIDWCDRRITLKGVNGKYVTAKKNGQLSASVDTPGETELFLMKLINRPLIVLRGEHG 384
Query: 122 FLSSGVDVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSN 181
F+ S ++ F+LEF+ + ++ +YWT+ + + + S
Sbjct: 385 FIGCRKMTGTLDSNRSIYDVFELEFNDGA--YSLKDATGKYWTVGSDMSVTSRCHPGWSL 442
Query: 182 ALYDLVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDS 222
D VA++ NG ++ +G L AN+++ D +
Sbjct: 443 EFCDY-----NKVAIQKVNGLYLKGDHAGVLKANAENIDST 478
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 159 QDRYWTLETGG-GIQASGDKKSSNALYDLVWQGD--GSVALRANNGKFIATKRSGHLYAN 215
++Y T E G I AS ++ L GD +V LR++ G+F++ + G +
Sbjct: 14 NNKYLTAEAFGFKINASASSLKKKQVWSLEPAGDDTSAVLLRSHLGRFLSADKDGKVSGE 73
Query: 216 SDSADDSCRY 225
SD+A CR+
Sbjct: 74 SDTAGPECRF 83
>sp|Q05634|FASC_STRPU Fascin OS=Strongylocentrotus purpuratus PE=1 SV=3
Length = 496
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 21/163 (12%)
Query: 123 LSSGVDVTAN---QEEISDHETFQLEFDPSTKRWYIR-------TMQDRYWTLETGGGIQ 172
L G DV+ E+I D ETFQLEF T ++ IR + ++W GIQ
Sbjct: 272 LKQGEDVSFKLLVDEDIEDTETFQLEF-VETDKYAIRVCDPKKNSRDAKFWKT-VAAGIQ 329
Query: 173 ASGDKKS-SNALYDLVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLIN 231
A+G+ K ++ + + + G+ + +RA GK+++ + +GHL+ D + F L+N
Sbjct: 330 ANGNSKDQTDCQFSVEYNGN-DMHVRAPGGKYVSVRDNGHLFLQDSPKD----FIFRLLN 384
Query: 232 RPILVLKCEQGFVGFKTGANNSLRLECNKANYETIQVERADRG 274
RP LVLKC GFVG K G + CN++N++ V + G
Sbjct: 385 RPKLVLKCPHGFVGMKEG---KAEVACNRSNFDVFTVTYKEGG 424
>sp|Q9QXW4|FSCN3_MOUSE Fascin-3 OS=Mus musculus GN=Fscn3 PE=2 SV=2
Length = 498
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 110 PSKFKIYSVPLSFLSSGVD--VTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLET 167
P+ + S FLS D V A E ++ FQ E D T +R+ Y
Sbjct: 263 PTWVSLKSKSRRFLSVIYDAEVCAASERLTQMSLFQYECDSETPTLQLRSANGYYLAQRR 322
Query: 168 GGGIQASGDKKSSNALYDLVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYF 227
I A G S+ + + W G + L++ NG+F+ G L AN +
Sbjct: 323 HRAIIADGHPMESDTFFRVHWNC-GKITLQSPNGRFLGIASDGLLMANVTIPGPNEELGI 381
Query: 228 YLINRPILVLKCEQGFVGFKTGANNSLRLECNKANYETIQVERADRGVVYFKGKSA 283
NRP LVL+ G+VG + +++ L L+CN + IQ+ +G+ +F+ +
Sbjct: 382 RFANRPFLVLRGRYGYVG--SSSDHDL-LKCNMDQPDCIQLLPCRQGIYHFQAQGG 434
>sp|Q9NQT6|FSCN3_HUMAN Fascin-3 OS=Homo sapiens GN=FSCN3 PE=2 SV=1
Length = 498
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 128 DVTANQEEISDHETFQLEFDPSTKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYDLV 187
+V A E ++ FQ E D + +R+ Y + + A G S+ + +
Sbjct: 283 EVRAASERLNRMSLFQFECDSESPTVQLRSANGYYLSQRRHRAVMADGHPLESDTFFRMH 342
Query: 188 WQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFYLINRPILVLKCEQGFVGFK 247
W G + L++ G+F+ + L AN + + NR LVL+ G+VG
Sbjct: 343 WNC-GRIILQSCRGRFLGIAPNSLLMANVILPGPNEEFGILFANRSFLVLRGRYGYVGSS 401
Query: 248 TGANNSLRLECNKANYETIQVERADRGVVYFKGKSA 283
+G + ++CN+ + I + G+ +F+ +
Sbjct: 402 SGHD---LIQCNQDQPDRIHLLPCRPGIYHFQAQGG 434
>sp|O73747|FRG1_TAKRU Protein FRG1 OS=Takifugu rubripes GN=frg1 PE=2 SV=1
Length = 255
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 149 STKRWYIRTMQDRYWTLETGGGIQASGDKKSSNALYDLVWQGDGSVALRANNGKFIATKR 208
S R +++ RY + + G + D ++ V+Q DG +AL A N FI+
Sbjct: 100 SDSRIALKSGYGRYLGINSEGLVVGRSDAIGPREQWEPVFQ-DGKMALLAANSCFISYSD 158
Query: 209 SGHLYANSDSADD 221
SG + ANS +A D
Sbjct: 159 SGDIVANSKTAGD 171
>sp|Q306W5|POLS_EEEV1 Structural polyprotein OS=Eastern equine encephalitis virus (strain
PE-0.0155) PE=3 SV=1
Length = 1242
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 169 GGIQASGDKKSSNALYDLVWQGDGSVALRANNGKFIATKRSGHLYANSDSADDSCRYYFY 228
G A + ++A++ L G + NGK + + HLYA + + Y+ Y
Sbjct: 362 GNAHAGYIRIQTSAMFGLKSDGVDLAYMSFMNGKTLKAIKIEHLYARTSAPCSLVSYHGY 421
Query: 229 LINRPILVLKCEQG---FVGFKTGANNSLRLECNKANYETIQVER 270
L+ +C G VGF+ GAN + +K + + E+
Sbjct: 422 Y-----LLAQCPPGDTVTVGFQDGANKHMCTIAHKVEFRPVGREK 461
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,169,181
Number of Sequences: 539616
Number of extensions: 4603467
Number of successful extensions: 9573
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9526
Number of HSP's gapped (non-prelim): 37
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)