Query psy16241
Match_columns 186
No_of_seqs 109 out of 1024
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 16:25:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s4y_A Thiamin pyrophosphokina 100.0 1E-52 3.6E-57 348.8 18.9 176 1-183 44-228 (247)
2 3k94_A Thiamin pyrophosphokina 100.0 3E-52 1E-56 341.4 17.6 166 2-183 26-193 (223)
3 3lm8_A Thiamine pyrophosphokin 100.0 2E-52 6.7E-57 342.4 16.3 166 2-183 27-196 (222)
4 3l8m_A Probable thiamine pyrop 100.0 2.8E-52 9.5E-57 339.3 14.2 166 1-184 23-194 (212)
5 3ihk_A Thiamin pyrophosphokina 100.0 9.9E-51 3.4E-55 331.5 19.1 166 1-184 20-191 (218)
6 3mel_A Thiamin pyrophosphokina 100.0 5.3E-51 1.8E-55 333.9 15.2 165 1-183 24-195 (222)
7 3cq9_A Uncharacterized protein 100.0 1.1E-50 3.6E-55 333.1 11.5 163 2-183 26-195 (227)
8 2g9z_A Thiamine pyrophosphokin 100.0 3E-49 1E-53 341.6 19.2 182 1-184 85-321 (348)
9 1ig0_A Thiamin pyrophosphokina 100.0 1.4E-48 4.9E-53 334.5 17.3 182 1-184 63-294 (319)
10 2omk_A Hypothetical protein; s 100.0 1.1E-46 3.8E-51 309.8 15.6 156 2-183 57-215 (231)
11 2pjk_A 178AA long hypothetical 89.2 0.3 1E-05 37.6 3.6 62 37-99 39-104 (178)
12 3pzy_A MOG; ssgcid, seattle st 89.2 0.67 2.3E-05 35.1 5.5 61 36-99 25-89 (164)
13 1y5e_A Molybdenum cofactor bio 89.1 0.51 1.7E-05 35.8 4.8 67 31-98 19-94 (169)
14 1mkz_A Molybdenum cofactor bio 87.9 0.44 1.5E-05 36.3 3.7 67 31-98 16-91 (172)
15 3iwt_A 178AA long hypothetical 87.6 0.45 1.5E-05 36.1 3.6 62 36-98 38-103 (178)
16 2is8_A Molybdopterin biosynthe 87.5 0.7 2.4E-05 34.8 4.6 65 36-101 19-87 (164)
17 3kbq_A Protein TA0487; structu 85.5 1.3 4.3E-05 34.0 5.1 66 36-104 21-90 (172)
18 3rfq_A Pterin-4-alpha-carbinol 85.3 1.2 4E-05 34.6 4.9 62 36-99 47-112 (185)
19 2g2c_A Putative molybdenum cof 85.2 0.87 3E-05 34.4 4.1 62 36-99 23-92 (167)
20 1di6_A MOGA, molybdenum cofact 81.6 1.5 5.1E-05 34.2 4.2 63 36-99 21-89 (195)
21 3s5p_A Ribose 5-phosphate isom 79.4 9 0.00031 29.2 7.7 49 40-88 36-89 (166)
22 1uuy_A CNX1, molybdopterin bio 78.6 2.7 9.1E-05 31.6 4.6 64 37-101 24-96 (167)
23 2pbq_A Molybdenum cofactor bio 78.4 2.8 9.6E-05 31.9 4.7 65 36-101 23-93 (178)
24 2vvp_A Ribose-5-phosphate isom 77.7 14 0.00049 27.9 8.4 47 42-88 20-72 (162)
25 3ph3_A Ribose-5-phosphate isom 76.6 15 0.0005 28.1 8.2 49 40-88 35-88 (169)
26 3he8_A Ribose-5-phosphate isom 76.3 16 0.00054 27.3 8.2 47 42-88 17-68 (149)
27 1o1x_A Ribose-5-phosphate isom 73.5 17 0.0006 27.3 7.8 49 40-88 27-80 (155)
28 3sgw_A Ribose 5-phosphate isom 72.8 14 0.00049 28.5 7.4 49 40-88 44-100 (184)
29 1jlj_A Gephyrin; globular alph 71.8 4.3 0.00015 31.2 4.3 64 36-100 32-102 (189)
30 1g8l_A Molybdopterin biosynthe 71.2 4.5 0.00015 35.0 4.7 64 36-101 202-268 (411)
31 1n2z_A Vitamin B12 transport p 68.6 12 0.0004 29.0 6.3 48 27-74 56-103 (245)
32 2r79_A Periplasmic binding pro 62.3 17 0.00059 28.8 6.2 48 26-73 57-105 (283)
33 2r7a_A Bacterial heme binding 62.0 14 0.00049 28.6 5.6 49 26-74 57-107 (256)
34 3md9_A Hemin-binding periplasm 60.8 14 0.00047 28.7 5.3 49 26-74 57-106 (255)
35 2fts_A Gephyrin; gephyrin, neu 59.3 10 0.00035 32.8 4.6 59 37-98 207-269 (419)
36 1uz5_A MOEA protein, 402AA lon 57.7 13 0.00046 31.9 5.1 63 36-101 205-271 (402)
37 4em8_A Ribose 5-phosphate isom 57.5 23 0.00078 26.4 5.7 45 42-88 24-74 (148)
38 1ylk_A Hypothetical protein RV 54.7 21 0.00073 27.0 5.2 61 27-88 35-99 (172)
39 3k7p_A Ribose 5-phosphate isom 50.5 25 0.00086 27.0 5.0 58 31-88 25-92 (179)
40 2vvr_A Ribose-5-phosphate isom 49.8 35 0.0012 25.4 5.6 49 40-88 16-69 (149)
41 3c5y_A Ribose/galactose isomer 46.9 32 0.0011 27.5 5.3 63 26-88 19-94 (231)
42 1ym3_A Carbonic anhydrase (car 46.3 17 0.00058 28.5 3.6 62 26-88 49-114 (215)
43 3las_A Putative carbonic anhyd 44.9 24 0.00083 26.5 4.1 58 30-88 33-93 (166)
44 2q8p_A Iron-regulated surface 44.6 19 0.00066 27.9 3.7 46 27-73 59-104 (260)
45 2qip_A Protein of unknown func 44.2 49 0.0017 24.2 5.7 44 45-88 68-119 (165)
46 4hn9_A Iron complex transport 42.5 30 0.001 28.1 4.7 44 27-72 115-158 (335)
47 2ppw_A Conserved domain protei 42.5 61 0.0021 25.6 6.2 48 41-88 23-78 (216)
48 2p4g_A Hypothetical protein; p 39.7 57 0.0019 26.0 5.9 40 45-86 157-196 (270)
49 3off_A LDLR chaperone BOCA; ME 37.6 7.2 0.00025 26.7 0.1 45 106-162 45-89 (90)
50 3psh_A Protein HI_1472; substr 36.6 57 0.002 26.1 5.5 31 27-58 83-113 (326)
51 2azn_A HTP reductase, putative 35.3 84 0.0029 23.9 6.1 36 49-86 116-151 (219)
52 4go7_X Aspartokinase; transfer 34.5 14 0.00047 28.8 1.3 61 32-93 120-195 (200)
53 3ofh_A LDLR chaperone MESD; mo 34.0 4.8 0.00016 27.6 -1.3 45 106-162 44-88 (89)
54 3gxh_A Putative phosphatase (D 33.1 77 0.0026 22.8 5.2 56 43-100 59-118 (157)
55 3ono_A Ribose/galactose isomer 32.7 1.1E+02 0.0039 23.9 6.4 47 42-88 24-77 (214)
56 1wu2_A MOEA protein, molybdopt 32.3 13 0.00045 31.9 0.9 54 37-93 210-267 (396)
57 1o2d_A Alcohol dehydrogenase, 30.7 75 0.0026 26.5 5.4 62 29-93 42-113 (371)
58 3teo_A Carbon disulfide hydrol 30.3 72 0.0025 24.8 4.8 58 30-88 30-90 (204)
59 3bfj_A 1,3-propanediol oxidore 27.9 1.7E+02 0.0057 24.3 7.1 65 26-93 32-107 (387)
60 4h59_A PIAA, iron-compound ABC 27.7 1.1E+02 0.0039 23.6 5.8 45 26-71 90-135 (308)
61 1ufz_A Hypothetical protein BA 27.2 33 0.0011 23.0 2.0 32 32-75 44-75 (83)
62 3ox4_A Alcohol dehydrogenase 2 26.8 85 0.0029 26.3 5.1 72 26-102 30-111 (383)
63 1i1q_B Anthranilate synthase c 26.1 51 0.0018 24.5 3.2 54 32-89 5-59 (192)
64 3e3i_A Carbonic anhydrase 2, b 26.0 1.1E+02 0.0037 24.2 5.3 62 26-88 32-100 (229)
65 2b3z_A Riboflavin biosynthesis 25.9 1.2E+02 0.0043 25.3 5.9 39 46-86 266-304 (373)
66 2bon_A Lipid kinase; DAG kinas 25.5 77 0.0026 25.9 4.5 59 29-88 31-93 (332)
67 1wyq_A Spectrin beta chain, br 24.3 33 0.0011 24.5 1.7 17 64-80 66-82 (127)
68 1yk1_E Natriuretic peptides B; 24.2 16 0.00053 19.2 -0.1 9 85-93 1-9 (26)
69 2r0b_A Serine/threonine/tyrosi 23.4 39 0.0013 23.9 2.0 27 26-52 8-34 (154)
70 1vlj_A NADH-dependent butanol 22.8 1.4E+02 0.0047 25.2 5.6 65 26-93 42-116 (407)
71 3vzx_A Heptaprenylglyceryl pho 22.8 1.8E+02 0.0061 22.9 5.9 52 57-111 14-65 (228)
72 3n57_C Atrial natriuretic fact 22.2 20 0.0007 19.0 0.2 10 84-93 5-14 (28)
73 2w3q_A Carbonic anhydrase 2; l 21.7 82 0.0028 25.0 3.7 61 26-88 62-130 (243)
74 3g1p_A Protein PHNP; C-P lyase 21.4 1.8E+02 0.0061 22.3 5.7 62 30-93 159-229 (258)
75 3ofg_A BOCA/MESD chaperone for 20.9 10 0.00034 26.2 -1.6 45 106-162 50-94 (95)
76 3tb6_A Arabinose metabolism tr 20.8 2.7E+02 0.0093 20.9 7.4 87 27-114 16-108 (298)
77 1wyl_A NEDD9 interacting prote 20.3 31 0.0011 24.1 0.9 17 64-80 66-82 (116)
78 2d88_A Protein mical-3; all al 20.3 31 0.0011 24.4 0.9 18 64-81 68-85 (121)
79 1yk0_E Atrial natriuretic fact 20.1 20 0.0007 18.7 -0.1 9 85-93 1-9 (26)
80 1bkr_A Spectrin beta chain; fi 20.1 26 0.00089 24.3 0.4 18 64-81 62-79 (109)
81 2qv7_A Diacylglycerol kinase D 20.0 88 0.003 25.5 3.7 57 31-88 28-91 (337)
No 1
>3s4y_A Thiamin pyrophosphokinase 1; structural genomics, structural genomics consortium, transferase; HET: TPP; 1.80A {Homo sapiens} PDB: 1ig3_A* 2f17_A*
Probab=100.00 E-value=1e-52 Score=348.84 Aligned_cols=176 Identities=36% Similarity=0.719 Sum_probs=157.1
Q ss_pred CEEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHhh-----
Q psy16241 1 KIRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITKR----- 75 (186)
Q Consensus 1 ~~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~----- 75 (186)
+++|||||||++|+++.++ ++.++.||+|||||||++++++++|+++++++++.||||+||+||||+++.++
T Consensus 44 ~~~i~aDgGa~~l~~~~~~---~~~~~~Pd~ivGD~DSi~~~~~~~~~~~~~~i~~~peKD~TD~ekAl~~~~~~~~~~~ 120 (247)
T 3s4y_A 44 LLRACADGGANRLYDITEG---ERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKD 120 (247)
T ss_dssp SCEEEETTHHHHHHHHTTT---CGGGCCCSEEEECCSSSCHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEchHHHHHHHhccc---cccCCCccEEEcCCcCCCHHHHHHHHhcCCEEEECCCCCcCHHHHHHHHHHHhhhhcc
Confidence 4689999999999994210 12279999999999999999999999999999988999999999999999873
Q ss_pred cCCCEEEEEEcCCCchhHHHHHHHHHHhcC----CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCce
Q psy16241 76 EKIDYLISIVEFNGRLDHCMSNINTLYKSS----LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPV 151 (186)
Q Consensus 76 ~~~~~i~v~G~~GgR~DH~l~ni~~l~~~~----~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~ 151 (186)
.++++|+++||+|||+||+|+||++|+++. .+++|+++++.+++++ +|.|++..+.+. .+++|||||+++++
T Consensus 121 ~~~~~I~ilGa~GGR~DH~Lani~lL~~~~~~~~~~i~lid~~n~i~ll~--~G~~~i~~~~~~--~g~~vSlipl~~~~ 196 (247)
T 3s4y_A 121 LKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQ--PGKHRLHVDTGM--EGDWCGLIPVGQPC 196 (247)
T ss_dssp CCCSEEEEECCSSSSHHHHHHHHHHHHHGGGTCSSCEEEEETTEEEEEEC--SEEEEEEC---C--EEEEEEEECCSSCE
T ss_pred CCCCEEEEEecCCCchhHHHHHHHHHHHHhhccCceEEEEeCCeEEEEEc--CCCEEEEEcCCC--CCCEEEEEECCCce
Confidence 279999999999999999999999999873 7899999999999999 899999876544 57999999999988
Q ss_pred eeeEEecceEecCCcccccCCcceeeeeEecC
Q psy16241 152 QQVYSTGLKWNLNNHTLAFGGMVSSSNTYENE 183 (186)
Q Consensus 152 ~~vt~~Glky~L~~~~l~~~~~~~~SNe~~~~ 183 (186)
++||++||||||+++++.++..+|+|||+.++
T Consensus 197 ~~lt~~Glky~L~~~~l~~g~~~~~SNe~~~~ 228 (247)
T 3s4y_A 197 MQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGS 228 (247)
T ss_dssp EEEEEESBSSCCSSEEEBTTTBCEEEECBCSC
T ss_pred eEEEEeccEEECCCCeecCCCceEEeeEEeCC
Confidence 89999999999999999999999999999875
No 2
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=3e-52 Score=341.43 Aligned_cols=166 Identities=24% Similarity=0.291 Sum_probs=156.1
Q ss_pred EEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCC-CCCccHHHHHHHHHHhhcCCCE
Q psy16241 2 IRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP-DQSYTDFQKAVMEITKREKIDY 80 (186)
Q Consensus 2 ~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~~~~~~~~~~ 80 (186)
++|||||||++|+++ |+.||+|||||||++++++++|++++++++++| |||+||+||||+++.+ +++++
T Consensus 26 ~~i~~Dgga~~l~~~---------g~~Pd~ivGD~DSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~-~g~~~ 95 (223)
T 3k94_A 26 CWVGVDRGTMTLLEA---------GFRPVRAFGDFDSLPAEDVVKLQQAFPDLDVWPAEKDKTDMEIALDWAVE-QTARC 95 (223)
T ss_dssp EEEEETTHHHHHHHH---------TCCCSEEESCGGGSCHHHHHHHHHHCTTCCEECCBTTBCHHHHHHHHHHT-TCCSE
T ss_pred EEEEECHHHHHHHHc---------CCCCCEEEeCcccCCHHHHHHHHhcCCeEEECCCcCCCCHHHHHHHHHHH-cCCCE
Confidence 789999999999999 899999999999999999999999999999976 9999999999999998 69999
Q ss_pred EEEEEcCCCchhHHHHHHHHHHhcC-CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeeeEEecc
Q psy16241 81 LISIVEFNGRLDHCMSNINTLYKSS-LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQVYSTGL 159 (186)
Q Consensus 81 i~v~G~~GgR~DH~l~ni~~l~~~~-~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~vt~~Gl 159 (186)
|+++||+|||+||+|+||++|++.. .+++|+++++++++++ +|.+++...+ .+++|||||++++++++|++||
T Consensus 96 I~i~Ga~GGR~DH~lani~lL~~~~~~~i~lid~~~~i~~l~--~g~~~i~~~~----~~~~vSlipl~~~~~~lt~~Gl 169 (223)
T 3k94_A 96 IRLFGATGGRLDHLFGNVELLLKYADRPIEIVDRQNVLTVHL--PGTYTVMYDA----RYCYVSYIPVSETVAEFTLTGF 169 (223)
T ss_dssp EEEESCSSSSHHHHHHHHHHHHHTTTSCEEEEETTEEEEEEC--SEEEEEECCT----TCCEEEEEECSSEEEEEEEESB
T ss_pred EEEEcCCCCchhHHHHHHHHHHhccCCeEEEEcCCeEEEEEe--CCcEEEEECC----CCCEEEEEECCCceeEEEEecc
Confidence 9999999999999999999999844 8999999999999998 8999887543 3699999999988888999999
Q ss_pred eEecCCcccccCCcceeeeeEecC
Q psy16241 160 KWNLNNHTLAFGGMVSSSNTYENE 183 (186)
Q Consensus 160 ky~L~~~~l~~~~~~~~SNe~~~~ 183 (186)
||||+++++.++.++|+|||+.++
T Consensus 170 ky~L~~~~l~~~~~~~~SNe~~~~ 193 (223)
T 3k94_A 170 KYPLTNCHISRGSTLCISNELIQS 193 (223)
T ss_dssp SSCCCSEEEETTTSCCBCCCBCSS
T ss_pred EEECCCCeecCCCceEEeeEEECC
Confidence 999999999999999999999876
No 3
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=2e-52 Score=342.37 Aligned_cols=166 Identities=25% Similarity=0.328 Sum_probs=155.8
Q ss_pred EEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCC-CCCccHHHHHHHHHHhhcCCCE
Q psy16241 2 IRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP-DQSYTDFQKAVMEITKREKIDY 80 (186)
Q Consensus 2 ~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~~~~~~~~~~ 80 (186)
++|||||||++|+++ |+.||+|||||||++++++++|++++++++++| +||+||+|+||++|.+ +++++
T Consensus 27 ~~i~~DgGa~~l~~~---------g~~Pd~ivGDfDSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~-~g~~~ 96 (222)
T 3lm8_A 27 LWIGVDKGTVTLLDA---------GIIPVEAFGDFDSITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALE-KQPDI 96 (222)
T ss_dssp EEEEETHHHHHHHHH---------TCCCSEEESCSTTSCHHHHHHHHHHCTTCEEECCCSSSCHHHHHHHHHHH-HCCSE
T ss_pred EEEEECHHHHHHHHc---------CCCCcEEEeCcccCCHHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHH-cCCCE
Confidence 789999999999999 899999999999999999999999999999986 9999999999999998 69999
Q ss_pred EEEEEcCCCchhHHHHHHHHHHhcC---CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeeeEEe
Q psy16241 81 LISIVEFNGRLDHCMSNINTLYKSS---LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQVYST 157 (186)
Q Consensus 81 i~v~G~~GgR~DH~l~ni~~l~~~~---~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~vt~~ 157 (186)
|+++||+|||+||+|+|+++|+++. .+++|+|+++++++++ +|.+++...+ .+++|||||++++++++|++
T Consensus 97 I~i~Ga~GgR~DH~lani~ll~~~~~~~~~i~lid~~~~i~~l~--~g~~~i~~~~----~~~~vSlipl~~~~~~lt~~ 170 (222)
T 3lm8_A 97 IQIFGITGGRADHFLGNIQLLYKGVKTNIKIRLIDKQNHIQMFP--PGEYDIEKDE----NKRYISFIPFSEDIHELTLT 170 (222)
T ss_dssp EEEESCCCSCHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEC--SEEEEEECCS----SCCEEEEEECSSCEEEEEEE
T ss_pred EEEEcCCCCchhHHHHHHHHHHHHHhcCCcEEEEeCCeEEEEEc--CCcEEEEECC----CCCEEEEEECCCceeeEEEe
Confidence 9999999999999999999999852 7899999999999998 8999887543 36999999999888899999
Q ss_pred cceEecCCcccccCCcceeeeeEecC
Q psy16241 158 GLKWNLNNHTLAFGGMVSSSNTYENE 183 (186)
Q Consensus 158 Glky~L~~~~l~~~~~~~~SNe~~~~ 183 (186)
||||||+++++.++.++|+|||+.++
T Consensus 171 Glky~L~~~~l~~~~~~~~SNe~~~~ 196 (222)
T 3lm8_A 171 GFKYPLNNCHITLGSTLCISNELIHS 196 (222)
T ss_dssp SBSSCEEEEEECTTCCTTSSBCBSSS
T ss_pred CcEEECCCCeecCCCeeEEeeEEECC
Confidence 99999999999999999999999876
No 4
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=100.00 E-value=2.8e-52 Score=339.35 Aligned_cols=166 Identities=25% Similarity=0.314 Sum_probs=139.4
Q ss_pred CEEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCC-CCCccHHHHHHHHHHhhcCCC
Q psy16241 1 KIRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP-DQSYTDFQKAVMEITKREKID 79 (186)
Q Consensus 1 ~~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~~~~~~~~~ 79 (186)
.++|||||||++|+++ |+.||+|||||||++++++++|++++ +++++| +||+||+||||+++.+ ++++
T Consensus 23 ~~~i~~DgGa~~l~~~---------g~~Pd~ivGD~DSi~~~~~~~~~~~~-~i~~~p~eKD~TD~e~Al~~a~~-~~~~ 91 (212)
T 3l8m_A 23 EHWIGIDRGTLILLES---------GITPQFAVGDFDSISDSERNFIQQQI-EINPYNSEKDDTDLALGIDQAVK-RGYR 91 (212)
T ss_dssp SEEEEETHHHHHHHHT---------TCCCSEEESCCCCSCHHHHHHHHHHT-BCCCCC---CBCHHHHHHHHHHH-TTCC
T ss_pred CEEEEECHHHHHHHHC---------CCCccEEEeCcccCCHHHHHHHhcCC-cEEEECCcCCCCHHHHHHHHHHH-CCCC
Confidence 4799999999999999 89999999999999999999999998 888887 9999999999999998 7999
Q ss_pred EEEEEEcCCCchhHHHHHHHHHHhc---C--CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeee
Q psy16241 80 YLISIVEFNGRLDHCMSNINTLYKS---S--LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQV 154 (186)
Q Consensus 80 ~i~v~G~~GgR~DH~l~ni~~l~~~---~--~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~v 154 (186)
+|+++||+|||+||+|+|+++|+++ . .+++|+++++++++++ +|.|++..+.+ +++|||||++++++ +
T Consensus 92 ~I~i~Ga~GgR~DH~lani~ll~~~~~~~~~~~i~lid~~~~i~~l~--~g~~~i~~~~~----~~~vSl~pl~~~~~-l 164 (212)
T 3l8m_A 92 NIDVYGATGGRLDHFMGALQILEKPEYAKMNINIKLIDDTNEIQFIQ--KGQFNVTYSEQ----FPYISFIPVIYPTV-I 164 (212)
T ss_dssp EEEEESCSSSCHHHHHHHHHHHTCHHHHTTTCEEEEECSSEEEEEEC--SEEECC---------CCEEEEEECC-CEE-E
T ss_pred EEEEEcCCCCchhHHHHHHHHHHhhhhhccCceEEEEeCCeEEEEEC--CCCEEEEeCCC----CcEEEEEECCCCeE-E
Confidence 9999999999999999999999874 2 7899999999999998 89988865532 38999999999887 9
Q ss_pred EEecceEecCCcccccCCcceeeeeEecCC
Q psy16241 155 YSTGLKWNLNNHTLAFGGMVSSSNTYENET 184 (186)
Q Consensus 155 t~~Glky~L~~~~l~~~~~~~~SNe~~~~~ 184 (186)
|++||||||+++++.++.++|+|||+.+++
T Consensus 165 t~~Glky~L~~~~l~~~~~~~~SNe~~~~~ 194 (212)
T 3l8m_A 165 SLKGFKYNLQNETLKLGSTLTISNELSQSC 194 (212)
T ss_dssp ESSSSCCSSEEC-------CCTTBCC---C
T ss_pred EEeccEEECCCCeecCCCeeEEeeEEECCe
Confidence 999999999999999999999999998764
No 5
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=100.00 E-value=9.9e-51 Score=331.47 Aligned_cols=166 Identities=22% Similarity=0.253 Sum_probs=150.1
Q ss_pred CEEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeC-CCCCccHHHHHHHHHHhhcCCC
Q psy16241 1 KIRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPT-PDQSYTDFQKAVMEITKREKID 79 (186)
Q Consensus 1 ~~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~-pdkD~TD~e~Al~~~~~~~~~~ 79 (186)
.++|||||||++|+++ |+.||+|||||||++++++++|++++++++++ ||||+||+||||+++.++.+++
T Consensus 20 ~~~i~~DgGa~~l~~~---------g~~Pd~ivGDfDSi~~~~~~~~~~~~~~i~~~~~eKD~TD~e~Al~~a~~~~~~~ 90 (218)
T 3ihk_A 20 DYFVGIDKGSSFLLKN---------QLPLDLAIGDFDSVSAEEFKQIKAKAKKLVMAPAEKNDTDTELALKTIFDCFGRV 90 (218)
T ss_dssp SEEEEETHHHHHHHHT---------TCCCSEEEECCTTSCHHHHHHHHTTCSSEEECCSSCSSCHHHHHHHHHHHHTSSC
T ss_pred CEEEEEcHHHHHHHHc---------CCCCCEEEeCcccCCHHHHHHHHhcCCeEEECCCCCCCCHHHHHHHHHHHhCCCC
Confidence 4799999999999999 89999999999999999999999999999986 5999999999999999854899
Q ss_pred EEEEEEcCCCchhHHHHHHHHHHhcC-----CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeee
Q psy16241 80 YLISIVEFNGRLDHCMSNINTLYKSS-----LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQV 154 (186)
Q Consensus 80 ~i~v~G~~GgR~DH~l~ni~~l~~~~-----~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~v 154 (186)
+|+++||+|||+||+|+||++|+++. .+++|++++|.++++. +|++++..+++ .++|||||+++ ++|
T Consensus 91 ~I~i~Ga~GGR~DH~lani~lL~~~~~~~~~~~i~lid~~n~i~~l~--~g~~~i~~~~~----~~~vSlipl~~--~~l 162 (218)
T 3ihk_A 91 EIIVFGAFGGRIDHMLSNIFLPSDPDLAPFMRCFKLRDEQNLVEFFP--AGQHQIEQATD----MVYISFMAANG--AHL 162 (218)
T ss_dssp EEEEESCSSSCHHHHHHHHTGGGSTTTGGGTTSEEEEETTEEEEEEE--EEEEEECCCSS----CCEEEEEESSC--CCE
T ss_pred EEEEECCCCCchhhHHHHHHHHHhhhhhccCceEEEEcCCcEEEEEc--CCCEEEEecCC----CcEEEEEEccC--CcE
Confidence 99999999999999999999998752 6899999999999998 79998876532 36999999997 589
Q ss_pred EEecceEecCCcccccCCcceeeeeEecCC
Q psy16241 155 YSTGLKWNLNNHTLAFGGMVSSSNTYENET 184 (186)
Q Consensus 155 t~~Glky~L~~~~l~~~~~~~~SNe~~~~~ 184 (186)
|++||||||+++++..+ ..++|||+.+++
T Consensus 163 t~~Glky~L~~~~l~~~-~~~~SNe~~~~~ 191 (218)
T 3ihk_A 163 SIQDAKYELTEENYFQK-KIYSSNEFKDKP 191 (218)
T ss_dssp EEESSSSCBCTTTCCCC-SEEEEECCCSSC
T ss_pred EEeccEEECCCccccCC-CCcEeeEEECCe
Confidence 99999999999999654 678999998753
No 6
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=100.00 E-value=5.3e-51 Score=333.89 Aligned_cols=165 Identities=22% Similarity=0.235 Sum_probs=151.6
Q ss_pred CEEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCC-CCCccHHHHHHHHHHhhcCCC
Q psy16241 1 KIRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP-DQSYTDFQKAVMEITKREKID 79 (186)
Q Consensus 1 ~~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~~~~~~~~~ 79 (186)
+++|||||||++|+++ |+.||+|||||||++++++++|+++|++++++| +||+||+|+||++|.+ ++++
T Consensus 24 ~~~I~aDgGa~~l~~~---------g~~Pd~ivGDfDSi~~~~~~~~~~~~~~~~~~~~eKD~TD~e~Al~~~~~-~~~~ 93 (222)
T 3mel_A 24 DYFVGIDRGCLHLLEA---------DLPLQLAVGDFDSLSREEYHFVQETTETLIQAPAEKDDTDTQLALQEALQ-RFPQ 93 (222)
T ss_dssp SCEEEETTHHHHHHTT---------TCCCCEEEECCTTSCTTHHHHHHHHCSSEEECCSSCSSCHHHHHHHHHHH-HCTT
T ss_pred CEEEEEcHHHHHHHHC---------CCCCCEEEeCcccCCHHHHHHHHhcCCcEEECCccCCCCHHHHHHHHHHH-hCCC
Confidence 3689999999999999 899999999999999999999999999999865 9999999999999998 5886
Q ss_pred -EEEEEEcCCCchhHHHHHHHHHHh--cC---CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceee
Q psy16241 80 -YLISIVEFNGRLDHCMSNINTLYK--SS---LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQ 153 (186)
Q Consensus 80 -~i~v~G~~GgR~DH~l~ni~~l~~--~~---~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~ 153 (186)
+|+++||+|||+||+|+|+++|++ +. .+++|++++|+++++. +|++++..+++ +++|||||++ ++++
T Consensus 94 ~~I~i~Ga~GgRlDH~lani~lL~~~~~~~~~~~i~lid~~n~i~~l~--~g~~~i~~~~~----~~~vSlipl~-~~~~ 166 (222)
T 3mel_A 94 AEMTIIGATGGRIDHLLANLWLPFEPRFQGVLRQIRLCDRQNSIQYYA--PGSYIVPKEPD----KEYLAYCCLT-PVEN 166 (222)
T ss_dssp SEEEEECCCSSCHHHHHHHHTGGGSHHHHTTGGGEEEECSSEEEEEEC--SSEEEEECCTT----CCEEEEEESS-CEEE
T ss_pred ceEEEEccCCCCHHHHHHHHHHHHhhHHhccCceEEEEeCCcEEEEEe--CCcEEEEecCC----CcEEEEEECc-ccce
Confidence 999999999999999999999987 32 7899999999999999 89999886532 4799999999 6778
Q ss_pred eEEecceEecCCcccccCCcceeeeeEecC
Q psy16241 154 VYSTGLKWNLNNHTLAFGGMVSSSNTYENE 183 (186)
Q Consensus 154 vt~~Glky~L~~~~l~~~~~~~~SNe~~~~ 183 (186)
||++||||||+++++.++.+++ |||+.++
T Consensus 167 lt~~Glky~L~~~~l~~g~~~~-SNe~~~~ 195 (222)
T 3mel_A 167 LTLRRSKYLLTNQDVPYPTSYA-SNEFIEE 195 (222)
T ss_dssp EEEESBSSCEEEEEECSCEEEE-EECBSSS
T ss_pred EEEeccEEECCCCeeeCCCCCE-eEEEECC
Confidence 9999999999999999998888 9999875
No 7
>3cq9_A Uncharacterized protein LP_1622; Q88WK7_lacpl, transferase, thiamine pyrophosphokinase, NESG, LPR114, structural genomics, PSI-2; 2.20A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=1.1e-50 Score=333.06 Aligned_cols=163 Identities=22% Similarity=0.249 Sum_probs=141.9
Q ss_pred EEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeC-CCCCccHHHHHHHHHHhhcCCC-
Q psy16241 2 IRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPT-PDQSYTDFQKAVMEITKREKID- 79 (186)
Q Consensus 2 ~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~-pdkD~TD~e~Al~~~~~~~~~~- 79 (186)
++|||||||++|+++ |+.||+|||||||++++++++|++++++++++ |+||+||+|+||++|.+ +++.
T Consensus 26 ~~I~aDgGa~~l~~~---------g~~Pd~ivGDfDSi~~e~~~~~~~~~~~~~~~~~~KD~TD~e~Al~~a~~-~~~~~ 95 (227)
T 3cq9_A 26 PWVGADRGALRLVKR---------GIQPVMVVGDFDSIDAAELQTVKDALVGAIVVKPDQDHTDTQLAIKSIFE-QLQPD 95 (227)
T ss_dssp CEEEETHHHHHHHHT---------TCCCSEEESCC---------CHHHHHHTSEEECCCSSSCHHHHHHHHHHH-HTCCS
T ss_pred EEEEEcHHHHHHHHc---------CCCCCEEEeCCcCCCHHHHHHHHhcCceEEECCCCCCCCHHHHHHHHHHH-hCCCc
Confidence 689999999999999 89999999999999999999999999888875 59999999999999998 5777
Q ss_pred EEEEEEcCCCchhHHHHHHHHHHhcC---C--CEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeee
Q psy16241 80 YLISIVEFNGRLDHCMSNINTLYKSS---L--PIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQV 154 (186)
Q Consensus 80 ~i~v~G~~GgR~DH~l~ni~~l~~~~---~--~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~v 154 (186)
+|+++|++|||+||+|+||++|+++. . +++|++++|.++++. +|++++..++ .+++|||||+++ + ++
T Consensus 96 ~I~i~Ga~GgR~DH~laNi~lL~~~~~~~~~~~i~lid~~n~i~~l~--~g~~~i~~~~----~~~~vSlipl~~-v-~l 167 (227)
T 3cq9_A 96 EVHLYGATGGRLDHLLANMWLVLDPVFRQWAPQIKLIDKQNSVRFFL--PGDYQITKEA----DKRYLAFVPLMP-M-HL 167 (227)
T ss_dssp EEEEESCSSSCHHHHHHHHSGGGSHHHHTTGGGEEEECSSEEEEEEC--SEEEEEECCT----TCCEEEEEESSC-E-EE
T ss_pred eEEEEcCCCCchhHHHHHHHHHHHHHhcCCCceEEEEeCCcEEEEEc--CCCEEEeeCC----CCCEEEEEECCC-C-eE
Confidence 99999999999999999999998764 4 899999999999999 8999988653 258999999998 7 89
Q ss_pred EEecceEecCCcccccCCcceeeeeEecC
Q psy16241 155 YSTGLKWNLNNHTLAFGGMVSSSNTYENE 183 (186)
Q Consensus 155 t~~Glky~L~~~~l~~~~~~~~SNe~~~~ 183 (186)
|++||||||+++++.++.+++ |||+.++
T Consensus 168 t~~Glky~L~~~~l~~g~~~~-SNe~~~~ 195 (227)
T 3cq9_A 168 TLPDEKYQLDAAYNAYPISWA-SNEFSGN 195 (227)
T ss_dssp EESSBSSCEEEEEESSCCCEE-EECBSSS
T ss_pred EEeccEEECCCceeeCCCceE-ceeEECC
Confidence 999999999999999999999 9999875
No 8
>2g9z_A Thiamine pyrophosphokinase; thiamin-PNP, TPK, thiamin pyrophosphokinase, structural GENO profun, bacterial targets at IGS-CNRS, france, BIGS; HET: VNP; 1.96A {Candida albicans} PDB: 2hh9_A*
Probab=100.00 E-value=3e-49 Score=341.61 Aligned_cols=182 Identities=28% Similarity=0.467 Sum_probs=157.4
Q ss_pred CEEEEEchhHHHHHHhhhcCC-------CCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHH
Q psy16241 1 KIRCTVDQGTDRWLLFLNQHN-------LDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEIT 73 (186)
Q Consensus 1 ~~~IaaDgGa~~l~~~~~~~~-------~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~ 73 (186)
.++||||||||+|+++..++. ..+.++.||+|||||||++++++++|+++|+.++..|+||+||++|||+++.
T Consensus 85 ~~~I~aDGGAn~L~~~~~~~~~~~~~~~g~~~~~~Pd~IvGDfDSi~~e~~~~y~~~g~~i~~~~dQD~TD~ekAL~~~~ 164 (348)
T 2g9z_A 85 EIIVCADGGANSLYEYFNDNNHHHHHENLQRSDYIPDYIVGDFDSISPDVKTYYESHGSKIIRQSSQYYNDFTKSIHCIQ 164 (348)
T ss_dssp SEEEEETTHHHHHHHHTC----------CCGGGCCCSEEEECCSSSCHHHHHHHHTTTCEEEECCCSSSCHHHHHHHHHH
T ss_pred CEEEEEccHHHHHHHhhhhhccccccccCCcccccccEEEccCcCCCHHHHHHHHhcCceEEcCCCcCcCHHHHHHHHHH
Confidence 379999999999999843211 1233499999999999999999999999999887789999999999999998
Q ss_pred hhc-----------------------------------CCCEEEEEEcCCCchhHHHHHHHHHHhcC-----CCEEEEcC
Q psy16241 74 KRE-----------------------------------KIDYLISIVEFNGRLDHCMSNINTLYKSS-----LPIYLLSA 113 (186)
Q Consensus 74 ~~~-----------------------------------~~~~i~v~G~~GgR~DH~l~ni~~l~~~~-----~~i~l~~~ 113 (186)
++. ++.+|+++||+|||+||+|+||++|+++. .+++|+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~I~ilGalGGR~DHtlanI~~L~~~~~~~~~~~i~lid~ 244 (348)
T 2g9z_A 165 LHYQLNHTKENWFESIDEVDGLAKLWNGLNNSSDVVVDIDITIYVLNAIGGRFDQTVQSINQLYIMNEDYPKVTVFFITT 244 (348)
T ss_dssp HHHHHTTTCTTTTTTSCTTTHHHHHHHHHHHTTCCCCCCCEEEEEESSSSSSHHHHHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred HhccccccccccccccccccccccccccccccccccccCCcEEEEEecCCCchhHHHHHHHHHHHhhhhcCCceEEEEcC
Confidence 841 37799999999999999999999999752 68999999
Q ss_pred CeEEEEEecCCCeEEEEeCCC-CC-C-----CCCEEEEEecCCce-eeeEEecceEecCCcccccCCcceeeeeEecCC
Q psy16241 114 KYMSWVLRANAGLHRIHLNPG-FT-S-----GKKTLGLIPVGSPV-QQVYSTGLKWNLNNHTLAFGGMVSSSNTYENET 184 (186)
Q Consensus 114 ~~~i~~l~~~~g~~~i~~~~~-~~-~-----~~~~~Sl~pl~~~~-~~vt~~Glky~L~~~~l~~~~~~~~SNe~~~~~ 184 (186)
++++|+++ +|.+.+..+.. .. + .+++|||||+++++ ..||++||||||+++.+.+++.+|+||++.+++
T Consensus 245 ~n~i~ll~--~G~~~i~~~~~~~~~~~~~~~~g~~~SLiPl~~~~~~~ltt~GLKy~L~~~~l~~g~~vstSNe~~~~~ 321 (348)
T 2g9z_A 245 NDIIFLLK--KGVNYISYKNRLMFHKDNGSSPTPTCGLLPLSNKTPIILNSYGLKYDMRNWKTEMLGQVSSSNRISGET 321 (348)
T ss_dssp SEEEEEEC--SEEEEEECSCGGGTBCCCSSCCSCEEEEECCSSSCCEEEEEESBSEEEESEEECTTSCCEEEEEBCBSS
T ss_pred CeEEEEEC--CCceEEecccccccccccccCCCCEEEEEEcCCCccceEEEeCcEEECCCceecCCCceeEeeEEeCCc
Confidence 99999999 89999987642 10 0 17999999999887 789999999999999999999999999998865
No 9
>1ig0_A Thiamin pyrophosphokinase; protein-substrate complex, compound active site, alpha-beta- alpha, beta sandwich, transferase; HET: VIB; 1.80A {Saccharomyces cerevisiae} SCOP: b.82.6.1 c.100.1.1
Probab=100.00 E-value=1.4e-48 Score=334.52 Aligned_cols=182 Identities=24% Similarity=0.416 Sum_probs=154.9
Q ss_pred CEEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHhh-----
Q psy16241 1 KIRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITKR----- 75 (186)
Q Consensus 1 ~~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~----- 75 (186)
.++|||||||++|+++...+...+..+.||+|||||||++++++++|+++|+.+++.|+||+||++|||+++.++
T Consensus 63 ~~~I~aDGGa~~l~~~~~~~g~~~~~~~Pd~IvGDfDSi~~e~~~~y~~~g~~i~~~~dqD~TD~ekAl~~i~~~~~~~~ 142 (319)
T 1ig0_A 63 DLKVCADGAANRLYDYLDDDETLRIKYLPNYIIGDLDSLSEKVYKYYRKNKVTIIKQTTQYSTDFTKCVNLISLHFNSPE 142 (319)
T ss_dssp SEEEEETTHHHHHHHHSCSCHHHHTTSCCSEEEECCTTSCHHHHHHHHHTTCEEEECCCSSSCHHHHHHHHHHHHHHCHH
T ss_pred CEEEEEccHHHHHHHhhhcccccccccccCEEEcCCcCCCHHHHHHHHhcCceEEeCCCCCCChHHHHHHHHHHhccccc
Confidence 379999999999999831100001129999999999999999999999999988888999999999999888531
Q ss_pred --------------------------------------cCCCEEEEEEcCCCchhHHHHHHHHHHhcC-----CCEEEEc
Q psy16241 76 --------------------------------------EKIDYLISIVEFNGRLDHCMSNINTLYKSS-----LPIYLLS 112 (186)
Q Consensus 76 --------------------------------------~~~~~i~v~G~~GgR~DH~l~ni~~l~~~~-----~~i~l~~ 112 (186)
.+..+|+++||+|||+||+|+||++|+++. .+++|++
T Consensus 143 ~~~~~~~~~~tds~~~~~~e~~~~~a~~~~~~~~~~~~~~~~~I~ilGalGGR~DH~lanI~~L~~~~~~~~~~~i~lid 222 (319)
T 1ig0_A 143 FRSLISNKDNLQSNHGIELEKGIHTLYNTMTESLVFSKVTPISLLALGGIGGRFDQTVHSITQLYTLSENASYFKLCYMT 222 (319)
T ss_dssp HHHHHTCSSCTTTGGGCCTTTHHHHHHHHHHTTCCGGGSCCEEEEEESSSSSSHHHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred ccccccccccccccccccchhhhhhhhhccccccccccCCCcEEEEEecCCCchhHHHHHHHHHHHhhhhcCCceEEEEc
Confidence 367899999999999999999999999852 6899999
Q ss_pred CCeEEEEEecCCCeEEEEeCCCCCC-CCCEEEEEecCCceeeeEEecceEecCCccccc-CCcceeeeeEecCC
Q psy16241 113 AKYMSWVLRANAGLHRIHLNPGFTS-GKKTLGLIPVGSPVQQVYSTGLKWNLNNHTLAF-GGMVSSSNTYENET 184 (186)
Q Consensus 113 ~~~~i~~l~~~~g~~~i~~~~~~~~-~~~~~Sl~pl~~~~~~vt~~Glky~L~~~~l~~-~~~~~~SNe~~~~~ 184 (186)
+++++++++ +|.|.+..+..... .+++|||||+++++.++|++||||||+++.+.+ ++.+|+||++.+++
T Consensus 223 ~~n~i~ll~--~G~~~i~~~~~~~~~~g~~~SliPl~~~~~~ltt~GlKy~L~~~~l~~~g~~~stSNe~~~~~ 294 (319)
T 1ig0_A 223 PTDLIFLIK--KNGTLIEYDPQFRNTCIGNCGLLPIGEATLVKETRGLKWDVKNWPTSVVTGRVSSSNRFVGDN 294 (319)
T ss_dssp SSEEEEEEC--SSCEEEECCHHHHHHHEEEEEEECTTSCEEEEEEESBSEEEEEEEEBTTTTBCEEEEEBCBSS
T ss_pred CCEEEEEEC--CCcEEEecccccccCCCCEEEEEECCCCcceEEEeCcEEECCCceeccCCCcceEeeEEeCCc
Confidence 999999999 89999986321000 268999999998888999999999999999999 88899999998865
No 10
>2omk_A Hypothetical protein; succinimide, thiamin pyrophosphokinase, structural genomics, protein structure initiative; 1.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-46 Score=309.81 Aligned_cols=156 Identities=19% Similarity=0.201 Sum_probs=136.5
Q ss_pred EEEEEchhHHHHHHhhhcCCCCCCCccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHhhcCCCEE
Q psy16241 2 IRCTVDQGTDRWLLFLNQHNLDPALYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITKREKIDYL 81 (186)
Q Consensus 2 ~~IaaDgGa~~l~~~~~~~~~~~~~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~~~~~~i 81 (186)
++|||||||++|+++ |+.||+|||||||++++++++|++ + +...|+||+||+|+|+.+|.+ +|+++|
T Consensus 57 ~iI~aDgGa~~L~~~---------gi~Pd~ivGDfDSi~~e~~~~~~~--~-i~~~~~kD~TD~e~Al~~a~~-~g~~~I 123 (231)
T 2omk_A 57 FVVCCXXAANEYISR---------GHTPDVIIGDGDSLLPEYKKRFSS--I-ILQISDQETNDQTKAVHYLQS-KGIRKI 123 (231)
T ss_dssp CEEEC--CHHHHHHT---------TCCCSEEESCGGGSCHHHHHHHGG--G-EECCCSSCCCHHHHHHHHHHH-TTCCEE
T ss_pred EEEEEhHHHHHHHHc---------CCCCCEEEeCCcCCCHHHHHhcCC--E-EEeCCCCCCCHHHHHHHHHHH-cCCCEE
Confidence 689999999999999 899999999999999999999984 2 333459999999999999998 799999
Q ss_pred EEEEcCCCchhHHHHHHHHHHhcC---CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeeeEEec
Q psy16241 82 ISIVEFNGRLDHCMSNINTLYKSS---LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQVYSTG 158 (186)
Q Consensus 82 ~v~G~~GgR~DH~l~ni~~l~~~~---~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~vt~~G 158 (186)
+++|++|||+||+|+||++|+++. .+++++++++++++++ |.+++... .+++|||||++ ++++|++|
T Consensus 124 ~i~Ga~GgRlDH~laNi~lL~~~~~~~~~i~lid~~~~~~l~~---g~~~i~~~-----~g~~vSlipl~--~~~lt~~G 193 (231)
T 2omk_A 124 AIVGATGKREDHTLGNISLLVEYMRSGMEVRTVTDYGTFIPVS---DTQSFASY-----PGQQVSIINFG--AKGLKAEG 193 (231)
T ss_dssp EEESCSSSCHHHHHHHHHHHHHHHHTTCEEEEECSSEEEEEEE---SSEEEECC-----TTCEEEEEEEE--EEEEEEES
T ss_pred EEECccCCchhHHHHHHHHHHHHHhcCCeEEEEeCCEEEEEeC---CCEEEecC-----CCCEEEEEEcc--cCcEEEeC
Confidence 999999999999999999999876 6899999999977764 77888644 57999999999 46899999
Q ss_pred ceEecCCcccccCCcceeeeeEecC
Q psy16241 159 LKWNLNNHTLAFGGMVSSSNTYENE 183 (186)
Q Consensus 159 lky~L~~~~l~~~~~~~~SNe~~~~ 183 (186)
|||||++.. +..+++|||+.++
T Consensus 194 lky~L~~~~---~~~~~~SNe~~~~ 215 (231)
T 2omk_A 194 LFYPLSDFT---NWWQGTLNEAIAD 215 (231)
T ss_dssp BSSCCCCCS---SGGGGTTEEBCSS
T ss_pred cEEECCCCC---CCceEECeEEECC
Confidence 999999844 4578999999875
No 11
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=89.24 E-value=0.3 Score=37.55 Aligned_cols=62 Identities=19% Similarity=0.223 Sum_probs=47.1
Q ss_pred CCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHH
Q psy16241 37 DSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNIN 99 (186)
Q Consensus 37 DSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~ 99 (186)
||-++-..+.+++.|.++..+ || |.-++..||+.+.++.+++-|++.|++| |.-|++-..+.
T Consensus 39 Dsn~~~L~~~l~~~G~~v~~~~iv~D-d~~~I~~al~~a~~~~~~DlVittGG~s~g~~D~t~eal~ 104 (178)
T 2pjk_A 39 DESGDIIKQLLIENGHKIIGYSLVPD-DKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIR 104 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECS-CHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTCCHHHHHG
T ss_pred ehHHHHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcchHHHHH
Confidence 555555667888899877664 44 6677899999888633699999999999 78899775543
No 12
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=89.15 E-value=0.67 Score=35.08 Aligned_cols=61 Identities=10% Similarity=0.069 Sum_probs=47.5
Q ss_pred CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNIN 99 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~ 99 (186)
.||-++-..+.+++.|.++..+ || | -++..||+.+.+ .+++-|++.|++| |.-|++--.+.
T Consensus 25 ~Dsn~~~l~~~l~~~G~~v~~~~iv~D-d-~~i~~al~~a~~-~~~DlVittGG~s~g~~D~t~eal~ 89 (164)
T 3pzy_A 25 EDRCGPIITEWLAQQGFSSAQPEVVAD-G-SPVGEALRKAID-DDVDVILTSGGTGIAPTDSTPDQTV 89 (164)
T ss_dssp -CCHHHHHHHHHHHTTCEECCCEEECS-S-HHHHHHHHHHHH-TTCSEEEEESCCSSSTTCCHHHHHH
T ss_pred eeHHHHHHHHHHHHCCCEEEEEEEeCC-H-HHHHHHHHHHHh-CCCCEEEECCCCCCCCCccHHHHHH
Confidence 5887777778899999877654 44 4 778889998875 4799999999999 79999865544
No 13
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=89.11 E-value=0.51 Score=35.77 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=50.1
Q ss_pred EEEcc-----CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHH
Q psy16241 31 LVTGD-----FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNI 98 (186)
Q Consensus 31 ~iiGD-----fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni 98 (186)
+.+|| .||-++-..+.+++.|..+... || |.-++..||+.+.+...++-|++.|++| |+-|++-..+
T Consensus 19 i~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~D-d~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~ 94 (169)
T 1y5e_A 19 VTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKD-DKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDVTIEAV 94 (169)
T ss_dssp EEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECS-SHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTCCHHHHH
T ss_pred EEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCCcHHHH
Confidence 45677 5666666678888899877653 44 6778899999887522689999999999 7889875444
No 14
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=87.95 E-value=0.44 Score=36.30 Aligned_cols=67 Identities=9% Similarity=0.071 Sum_probs=49.6
Q ss_pred EEEcc-----CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHH
Q psy16241 31 LVTGD-----FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNI 98 (186)
Q Consensus 31 ~iiGD-----fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni 98 (186)
+.+|| .||-++-..+.+++.|..+... || |.-++..||+.+.++.+++-|++.|++| |.-|++-..+
T Consensus 16 i~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~D-d~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t~ea~ 91 (172)
T 1mkz_A 16 LTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKE-NRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEAL 91 (172)
T ss_dssp EEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECS-CHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCHHHHH
T ss_pred EEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCHHHHH
Confidence 45576 4665566668888899877653 44 6778889999988722699999999999 7888875433
No 15
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=87.62 E-value=0.45 Score=36.14 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=45.9
Q ss_pred CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNI 98 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni 98 (186)
.|+-.+-..+.+++.|.++..+ || |.-.+..|+..+.....++-|+..|++| |.-|++--.+
T Consensus 38 ~D~ng~~L~~~L~~~G~~v~~~~iV~D-d~~~i~~al~~~~a~~~~DlVittGG~g~~~~D~t~ea~ 103 (178)
T 3iwt_A 38 VDESGDIIKQLLIENGHKIIGYSLVPD-DKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETI 103 (178)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECS-CHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTCCHHHHH
T ss_pred CcchHHHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEecCCcccCCCCchHHHH
Confidence 4665666678899999888764 44 5567888888766435689999999999 7888775443
No 16
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=87.48 E-value=0.7 Score=34.81 Aligned_cols=65 Identities=14% Similarity=0.088 Sum_probs=50.1
Q ss_pred CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINTL 101 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~l 101 (186)
.||-++-..+.+++.|..+... || |.-++..||+.+.++..++-|++.|++| |+-|++-..+.-+
T Consensus 19 ~D~n~~~l~~~l~~~G~~v~~~~iv~D-d~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~~ 87 (164)
T 2is8_A 19 QDTTHLAIREVLAGGPFEVAAYELVPD-EPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATREL 87 (164)
T ss_dssp CCCHHHHHHHHHTTSSEEEEEEEEECS-CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHTT
T ss_pred ccchHHHHHHHHHHCCCeEeEEEEcCC-CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCChHHHHHHH
Confidence 4776777778888889776653 44 6678899999887622689999999999 8999987666543
No 17
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=85.50 E-value=1.3 Score=34.03 Aligned_cols=66 Identities=9% Similarity=-0.033 Sum_probs=50.8
Q ss_pred CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHHHHhc
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINTLYKS 104 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~l~~~ 104 (186)
.||-+.-..+.+++.|..+... || |.-++..||+.+.++ ++-|++.|++| |.-|++--.+.-++..
T Consensus 21 ~DtN~~~l~~~L~~~G~~v~~~~iv~D-d~~~I~~~l~~a~~~--~DlVittGG~g~~~~D~T~ea~a~~~~~ 90 (172)
T 3kbq_A 21 VNTNAAFIGNFLTYHGYQVRRGFVVMD-DLDEIGWAFRVALEV--SDLVVSSGGLGPTFDDMTVEGFAKCIGQ 90 (172)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECS-CHHHHHHHHHHHHHH--CSEEEEESCCSSSTTCCHHHHHHHHHTC
T ss_pred EeHHHHHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHHHHhc--CCEEEEcCCCcCCcccchHHHHHHHcCC
Confidence 4665666667888899877653 44 677889999988863 89999999999 7899988777655543
No 18
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=85.32 E-value=1.2 Score=34.58 Aligned_cols=62 Identities=11% Similarity=0.015 Sum_probs=49.0
Q ss_pred CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNIN 99 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~ 99 (186)
.||-++-..+.+++.|.++..+ || |.-++..+|+.+.. .+++-|++.|++| |.-|++--.+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~D-d~~~I~~al~~a~~-~~~DlVIttGGts~g~~D~t~eal~ 112 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEA-DEVDIRNALNTAVI-GGVDLVVSVGGTGVTPRDVTPESTR 112 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECS-CHHHHHHHHHHHHH-TTCSEEEEESCCSSSTTCCHHHHHH
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHHHHh-CCCCEEEECCCCCCCCcccHHHHHH
Confidence 6887777788999999777653 44 66778899998874 4799999999999 78998865443
No 19
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=85.24 E-value=0.87 Score=34.36 Aligned_cols=62 Identities=8% Similarity=0.116 Sum_probs=45.6
Q ss_pred CCCCChHHHHH----HHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHH
Q psy16241 36 FDSVSSNSMGR----FLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNIN 99 (186)
Q Consensus 36 fDSi~~~~~~~----~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~ 99 (186)
.||-++-..+. +++.|.++... || |.-++..||+.+.+ .+++-|++.|++| |.-|++--.+.
T Consensus 23 ~D~n~~~l~~~~~~~l~~~G~~v~~~~iv~D-d~~~I~~~l~~a~~-~~~DlVittGG~g~~~~D~t~ea~~ 92 (167)
T 2g2c_A 23 ENKALPLLQRLMSDELQDYSYELISEVVVPE-GYDTVVEAIATALK-QGARFIITAGGTGIRAKNQTPEATA 92 (167)
T ss_dssp CCCHHHHHHHHHCC----CEEEEEEEEEECS-SHHHHHHHHHHHHH-TTCSEEEEESCCSSSTTCCHHHHHH
T ss_pred eccHHHHHHHhHHhHHHHCCCEEeEEEEeCC-CHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCcChHHHHH
Confidence 57766666778 88888766543 44 67788999999886 4699999999999 79999876554
No 20
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=81.60 E-value=1.5 Score=34.18 Aligned_cols=63 Identities=10% Similarity=0.021 Sum_probs=47.2
Q ss_pred CCCCChHHHHHHHhcCCc--eee---CCCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSD--IVP---TPDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNIN 99 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~--i~~---~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~ 99 (186)
.||-.+-..+.+++.|.. +.. .|| |.-.+..||+.+.+..+++-|++.|++| |.-|++--.+.
T Consensus 21 ~D~n~~~L~~~L~~~G~~~~v~~~~iV~D-d~~~I~~al~~a~~~~~~DlVitTGGtg~g~~D~T~ea~~ 89 (195)
T 1di6_A 21 QDKGIPALEEWLTSALTTPFELETRLIPD-EQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATL 89 (195)
T ss_dssp -CCHHHHHHHHHHHHBCSCEEEEEEEEES-CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHH
T ss_pred EchHHHHHHHHHHHcCCCCceEEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccHHHHHH
Confidence 477777777889988876 333 355 6778888999887633799999999999 78899865543
No 21
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=79.40 E-value=9 Score=29.20 Aligned_cols=49 Identities=20% Similarity=0.188 Sum_probs=35.3
Q ss_pred ChHHHHHHHhcCCceeeC-C---C-CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 40 SSNSMGRFLALGSDIVPT-P---D-QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 40 ~~~~~~~~~~~g~~i~~~-p---d-kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
++.++++++++|.+++.+ + + -|+.|+..++-.+.....++.-++++++|
T Consensus 36 K~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTG 89 (166)
T 3s5p_A 36 RMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTG 89 (166)
T ss_dssp HHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 345667888999888875 3 1 37888888888777655678889999998
No 22
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=78.64 E-value=2.7 Score=31.57 Aligned_cols=64 Identities=13% Similarity=0.233 Sum_probs=46.2
Q ss_pred CCCChHHHHHHHhc-----CCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHHH
Q psy16241 37 DSVSSNSMGRFLAL-----GSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINTL 101 (186)
Q Consensus 37 DSi~~~~~~~~~~~-----g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~l 101 (186)
||-++...+.+++. |.++..+ || |.-++..||+.+.+...++-|++.|++| |.-|++-..+.-+
T Consensus 24 d~n~~~l~~~l~~~~~~~~G~~v~~~~iv~D-d~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~~a~~~~ 96 (167)
T 1uuy_A 24 DRSGPRAVSVVDSSSEKLGGAKVVATAVVPD-EVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKV 96 (167)
T ss_dssp CSHHHHHHHHHHHTTTTTTSEEEEEEEEECS-CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred cCcHHHHHHHHHhccccCCCcEEeEEEEcCC-CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 55445555777777 8766653 44 6678899999887523689999999999 7999986554433
No 23
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=78.36 E-value=2.8 Score=31.88 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=46.3
Q ss_pred CCCCChHHHHHHH---hcCCceee--CCCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHHH
Q psy16241 36 FDSVSSNSMGRFL---ALGSDIVP--TPDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINTL 101 (186)
Q Consensus 36 fDSi~~~~~~~~~---~~g~~i~~--~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~l 101 (186)
.||-+.-..+.++ +.|..+.. .|| |.-++..+|+.+.+...++-|++.|++| |.-|++-..+.-+
T Consensus 23 ~Dsn~~~l~~~l~~l~~~G~~v~~~iv~D-d~~~I~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~~ 93 (178)
T 2pbq_A 23 EDISGKAIIDYLKDVIITPFEVEYRVIPD-ERDLIEKTLIELADEKGCSLILTTGGTGPAPRDVTPEATEAV 93 (178)
T ss_dssp CCHHHHHHHHHHHHHBCSCCEEEEEEECS-CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred ecchHHHHHHHHHHHHhCCCEEEEEEcCC-CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 4665555566666 78877622 244 6778889999887622689999999999 7889987555443
No 24
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=77.74 E-value=14 Score=27.93 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=35.6
Q ss_pred HHHHHHHhcCCceeeC-C--CC---CccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 42 NSMGRFLALGSDIVPT-P--DQ---SYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 42 ~~~~~~~~~g~~i~~~-p--dk---D~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
.++++++++|.+++.+ + +. |+.|+..++-.+.....++.-++++++|
T Consensus 20 ~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 72 (162)
T 2vvp_A 20 RIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSG 72 (162)
T ss_dssp HHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred HHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 3567888899888875 3 22 6788888777776655678889999998
No 25
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=76.61 E-value=15 Score=28.10 Aligned_cols=49 Identities=20% Similarity=0.200 Sum_probs=37.3
Q ss_pred ChHHHHHHHhcCCceeeC-C-C---CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 40 SSNSMGRFLALGSDIVPT-P-D---QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 40 ~~~~~~~~~~~g~~i~~~-p-d---kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
++.++++++++|.+++.+ + . -|+.|+..++-.+.....++.-++++++|
T Consensus 35 K~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 88 (169)
T 3ph3_A 35 KREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 88 (169)
T ss_dssp HHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred HHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 446678889999888876 3 1 37788888888777645578888899988
No 26
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=76.28 E-value=16 Score=27.30 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCceeeC-C-C---CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 42 NSMGRFLALGSDIVPT-P-D---QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 42 ~~~~~~~~~g~~i~~~-p-d---kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
.++++++++|.+++.+ + . -|+.|+..++-.+.....++.-++++++|
T Consensus 17 ~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 68 (149)
T 3he8_A 17 EIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 68 (149)
T ss_dssp HHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred HHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 4567888889888875 3 1 37788888887777645578888899998
No 27
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=73.46 E-value=17 Score=27.25 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=37.1
Q ss_pred ChHHHHHHHhcCCceeeC-C--C--CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 40 SSNSMGRFLALGSDIVPT-P--D--QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 40 ~~~~~~~~~~~g~~i~~~-p--d--kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
++.++++++++|.+++.+ + + -|+.|+..++-.+.....++.-++++++|
T Consensus 27 K~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 80 (155)
T 1o1x_A 27 KEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGTG 80 (155)
T ss_dssp HHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCc
Confidence 445668899999888876 3 2 26788888887777645678889999998
No 28
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=72.82 E-value=14 Score=28.54 Aligned_cols=49 Identities=14% Similarity=0.138 Sum_probs=36.1
Q ss_pred ChHHHHHHHhcC--CceeeC-CC-----CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 40 SSNSMGRFLALG--SDIVPT-PD-----QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 40 ~~~~~~~~~~~g--~~i~~~-pd-----kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
++.++++++++| .+++.+ +. -|+.|+..++-.+.....++.-++++++|
T Consensus 44 K~~i~~~L~~~G~g~eV~D~G~~s~~e~~DYPd~a~~vA~~V~~ge~d~GIliCGTG 100 (184)
T 3sgw_A 44 KEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMICGTG 100 (184)
T ss_dssp HHHHHHHHTTCTTEEEEEECSCCSTTCCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHHhCCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 445667888888 577775 32 27788888888777645678888999998
No 29
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=71.77 E-value=4.3 Score=31.23 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=47.1
Q ss_pred CCCCChHHHHHHHh---cCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLA---LGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINT 100 (186)
Q Consensus 36 fDSi~~~~~~~~~~---~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~ 100 (186)
.||-.+-..+.+++ .|..+..+ || |.-++..||+.+.+...++-|++.|++| |+-|++-..+.-
T Consensus 32 ~D~n~~~L~~~L~~~~~~G~~v~~~~iv~D-d~~~I~~al~~a~~~~~~DlVIttGGtg~g~~D~t~eal~~ 102 (189)
T 1jlj_A 32 EDRSGINLKDLVQDPSLLGGTISAYKIVPD-EIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKE 102 (189)
T ss_dssp CCHHHHHHHHHHHCTTTTCCEEEEEEEECS-CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHH
T ss_pred cchHHHHHHHHHhchhcCCcEEEEEEEeCC-CHHHHHHHHHHHhhcCCCCEEEEcCCCCCCCcccHHHHHHH
Confidence 46655666677877 68776653 44 6677888999887533689999999999 799998655543
No 30
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=71.16 E-value=4.5 Score=35.03 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=50.5
Q ss_pred CCCCChHHHHHHHhcCCceeeCC--CCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPTP--DQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINTL 101 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~p--dkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~l 101 (186)
.||-+.-....+++.|.++..+. ..|.-.+..||+.+.+ +++-|++.|+.| |.-|++-..+.-+
T Consensus 202 ~dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~al~~a~~--~~DlvittGG~s~g~~D~t~~al~~~ 268 (411)
T 1g8l_A 202 YDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADS--QADVVISSGGVSVGEADYTKTILEEL 268 (411)
T ss_dssp ECCHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHH--HCSEEEECSSSCSSSCSHHHHHHHHH
T ss_pred EcCchHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhh--cCCEEEECCCCCCCCcccHHHHHHhc
Confidence 47777777788999998877642 2367788899998875 589999999999 8999988777654
No 31
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=68.64 E-value=12 Score=29.00 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=34.3
Q ss_pred ccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHh
Q psy16241 27 YWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITK 74 (186)
Q Consensus 27 ~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~ 74 (186)
+.||+|++.-.+..++..+.+++.|++++.++.+...|....++.+-+
T Consensus 56 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~ 103 (245)
T 1n2z_A 56 LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAP 103 (245)
T ss_dssp TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGG
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 789999985334567788899999988887765555566666655443
No 32
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=62.30 E-value=17 Score=28.79 Aligned_cols=48 Identities=8% Similarity=0.189 Sum_probs=34.5
Q ss_pred CccccEEEccCCCCChHHHHHHHhcCCceeeCCC-CCccHHHHHHHHHH
Q psy16241 26 LYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPD-QSYTDFQKAVMEIT 73 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pd-kD~TD~e~Al~~~~ 73 (186)
.+.||+||+.-....++..+.+++.|++++.++. ....|....++.+-
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg 105 (283)
T 2r79_A 57 ALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLG 105 (283)
T ss_dssp TTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHH
Confidence 4789999986554457778899999988888763 45556666665543
No 33
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=62.00 E-value=14 Score=28.65 Aligned_cols=49 Identities=16% Similarity=0.195 Sum_probs=34.6
Q ss_pred CccccEEEccCCCCChHHHHHHHhcCCceeeCCC-C-CccHHHHHHHHHHh
Q psy16241 26 LYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPD-Q-SYTDFQKAVMEITK 74 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pd-k-D~TD~e~Al~~~~~ 74 (186)
.+.||+||+...+..++..+.+++.|++++.++. . +..|....++.+-+
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~ 107 (256)
T 2r7a_A 57 SLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAK 107 (256)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 4789999997655567788899999988877652 3 45566656655433
No 34
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=60.82 E-value=14 Score=28.72 Aligned_cols=49 Identities=10% Similarity=0.138 Sum_probs=35.4
Q ss_pred CccccEEEccCCCCChHHHHHHHhcCCceeeCC-CCCccHHHHHHHHHHh
Q psy16241 26 LYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP-DQSYTDFQKAVMEITK 74 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~~~~ 74 (186)
.+.||+||+.-.+...+..+.+++.|++++.++ .++..|....++.+-+
T Consensus 57 ~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~ 106 (255)
T 3md9_A 57 AMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVAT 106 (255)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHH
T ss_pred ccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHH
Confidence 489999999876655677888998898888776 3556666666655433
No 35
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=59.32 E-value=10 Score=32.77 Aligned_cols=59 Identities=22% Similarity=0.192 Sum_probs=47.5
Q ss_pred CCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHH
Q psy16241 37 DSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNI 98 (186)
Q Consensus 37 DSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni 98 (186)
||-+.-....+++.|.++..+ || |.-.+..||+.+.++ ++-|++.|+.| |.-|++-..+
T Consensus 207 dsN~~~L~~~l~~~G~~v~~~~iv~D-d~~~i~~~l~~a~~~--~DlVittGG~s~g~~D~t~~al 269 (419)
T 2fts_A 207 DSNRSTLLATIQEHGYPTINLGIVGD-NPDDLLNALNEGISR--ADVIITSGGVSMGEKDYLKQVL 269 (419)
T ss_dssp CCHHHHHHHHHHTTTCCEEEEEEECS-SHHHHHHHHHHHHHH--CSEEEEESCCSSSCCHHHHHHH
T ss_pred cCchHHHHHHHHHCCCEEEEEeecCC-CHHHHHHHHHHHHhc--CCEEEEcCCCcCCCcccHHHHH
Confidence 676667778899999887764 34 667788899988863 89999999999 8999987666
No 36
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=57.67 E-value=13 Score=31.90 Aligned_cols=63 Identities=16% Similarity=0.123 Sum_probs=46.0
Q ss_pred CCCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhHHHHHHHHH
Q psy16241 36 FDSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDHCMSNINTL 101 (186)
Q Consensus 36 fDSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH~l~ni~~l 101 (186)
.||-+.-....+++.|..+..+ || |.-.+..||+.+.+ .++-|++.|+.| |.-|++-..+.-+
T Consensus 205 ~DsN~~~L~~~l~~~G~~v~~~~iv~D-d~~~i~~~l~~a~~--~~DlVittGG~s~g~~D~t~~al~~~ 271 (402)
T 1uz5_A 205 YDINGRALCDAINELGGEGIFMGVARD-DKESLKALIEKAVN--VGDVVVISGGASGGTKDLTASVIEEL 271 (402)
T ss_dssp ECCHHHHHHHHHHHHTSEEEEEEEECS-SHHHHHHHHHHHHH--HCSEEEEECCC-----CHHHHHHHHH
T ss_pred EcchHHHHHHHHHhCCCeEEEEEEeCC-CHHHHHHHHHHHhh--CCCEEEEcCCCCCCCcccHHHHHHhh
Confidence 3776677778888999887764 44 66778889998876 389999999999 8999988776654
No 37
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=57.46 E-value=23 Score=26.39 Aligned_cols=45 Identities=13% Similarity=0.212 Sum_probs=33.5
Q ss_pred HHHHHHHhcCCceeeC-C---C--CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 42 NSMGRFLALGSDIVPT-P---D--QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 42 ~~~~~~~~~g~~i~~~-p---d--kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
.++++++++|.+++.+ + + -|+.|+..++-.+.. .++.-++++++|
T Consensus 24 ~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~--~~d~GIliCGTG 74 (148)
T 4em8_A 24 FLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVS--DTSFGVLICGTG 74 (148)
T ss_dssp HHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCB--TTBEEEEEESSS
T ss_pred HHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHH--HhCeEEEEccCc
Confidence 4567888899888876 3 2 267787777776664 678888899988
No 38
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis}
Probab=54.67 E-value=21 Score=26.97 Aligned_cols=61 Identities=8% Similarity=-0.002 Sum_probs=39.6
Q ss_pred ccc-cEEEccCCC-CChHHHHHHHhcC-CceeeC-CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 27 YWP-DLVTGDFDS-VSSNSMGRFLALG-SDIVPT-PDQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 27 ~~P-d~iiGDfDS-i~~~~~~~~~~~g-~~i~~~-pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
-.| -++||=.|| +.++.+--. ..| ..+++- -..=..+..-+|+++....+.++|+|+|=.+
T Consensus 35 q~P~~lvi~CsDSRv~~e~i~~~-~pGdlFViRNaGn~v~~~~~~sleyav~~L~v~~IvV~GH~~ 99 (172)
T 1ylk_A 35 PSKHIAIVACMDARLDVYRMLGI-KEGEAHVIRNAGCVVTDDVIRSLAISQRLLGTREIILLHHTD 99 (172)
T ss_dssp CTTCEEEEEECCTTCCHHHHHTC-CTTSEEEEEETTSCCCHHHHHHHHHHHHTTCCCEEEEEEESS
T ss_pred CCCCEEEEEeeCCCCCHHHHcCC-CCCcEEEEeccCCcCCHHHHHHHHHHHHhcCCCEEEEEccCC
Confidence 344 578999999 666554321 223 344442 2333345667999998889999999998544
No 39
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=50.50 E-value=25 Score=27.04 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=41.8
Q ss_pred EEEc-cCC--CCChHHHHHHHh--cCCceeeC-C-C---CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 31 LVTG-DFD--SVSSNSMGRFLA--LGSDIVPT-P-D---QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 31 ~iiG-DfD--Si~~~~~~~~~~--~g~~i~~~-p-d---kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
++|| |-- .+++.+++++++ +|.+++.+ + . -|+.|+..++-.+.....++.-++++++|
T Consensus 25 IaIgsDhaG~~lK~~i~~~L~~~~~G~eV~D~G~~s~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTG 92 (179)
T 3k7p_A 25 VAIGTDHPAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLAAGSG 92 (179)
T ss_dssp EEEEECTGGGGGHHHHHHHHHHTCTTEEEEECSCSSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred EEEEECchHHHHHHHHHHHHHhcCCCCeEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEccCc
Confidence 5666 322 245667788998 89888876 3 2 36788888887777645678889999998
No 40
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=49.77 E-value=35 Score=25.35 Aligned_cols=49 Identities=12% Similarity=0.221 Sum_probs=37.0
Q ss_pred ChHHHHHHHhcCCceeeC-C-C---CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 40 SSNSMGRFLALGSDIVPT-P-D---QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 40 ~~~~~~~~~~~g~~i~~~-p-d---kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+..++++++++|.+++.+ + + -|+.|+..++-.+.....++.-++++++|
T Consensus 16 K~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 69 (149)
T 2vvr_A 16 KHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGTG 69 (149)
T ss_dssp HHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 445678899999888876 4 2 26788888777776645578889999998
No 41
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=46.86 E-value=32 Score=27.47 Aligned_cols=63 Identities=8% Similarity=-0.023 Sum_probs=42.7
Q ss_pred CccccEEEccCCCCC-----hHHHHHHHhcCCceeeC-CC----C---CccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 26 LYWPDLVTGDFDSVS-----SNSMGRFLALGSDIVPT-PD----Q---SYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~-----~~~~~~~~~~g~~i~~~-pd----k---D~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+.+.-+++|-=-.-. +.+.++++++|.+++.+ +. . |+.|+..++-.+.....++.-++++++|
T Consensus 19 ~mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGTG 94 (231)
T 3c5y_A 19 GMKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTG 94 (231)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSS
T ss_pred cceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCc
Confidence 455555555322222 45567888999988886 42 1 5778888777776645678889999998
No 42
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A
Probab=46.29 E-value=17 Score=28.46 Aligned_cols=62 Identities=15% Similarity=0.069 Sum_probs=40.6
Q ss_pred Cccc-cEEEccCCC-CChHHHHHHHhcC-CceeeCC-CCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 26 LYWP-DLVTGDFDS-VSSNSMGRFLALG-SDIVPTP-DQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 26 ~~~P-d~iiGDfDS-i~~~~~~~~~~~g-~~i~~~p-dkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+-.| -++||=.|| +.++.+--. ..| +.+++-. ..=..+..-+|+||....+.++|+|+|=.+
T Consensus 49 gQ~P~~lvi~CsDSRV~pe~i~~~-~pGdlFViRNaGN~V~~~~~~sleyAV~~L~v~~IvV~GHs~ 114 (215)
T 1ym3_A 49 GQKPTAVIFGCADSRVAAEIIFDQ-GLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDS 114 (215)
T ss_dssp -CCCSEEEEEETTCSSCHHHHTTC-CTTSEEEEEEGGGCCCHHHHHHHHHHHHTSCCCEEEEEEESS
T ss_pred CCCCceEEEecCCCCcCHHHHcCC-CCCCEEEEecccccCCHhHHHHHHHHHHhcCCCEEEEecccC
Confidence 4445 568899999 666654211 223 3334422 222347888999999989999999999665
No 43
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0
Probab=44.89 E-value=24 Score=26.53 Aligned_cols=58 Identities=12% Similarity=0.155 Sum_probs=38.2
Q ss_pred cEEEccCCC-CChHHHHHHHhcC-CceeeCC-CCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 30 DLVTGDFDS-VSSNSMGRFLALG-SDIVPTP-DQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 30 d~iiGDfDS-i~~~~~~~~~~~g-~~i~~~p-dkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
-++||-.|| +.++..-.. ..| ..+++-. ..=..|..-+|.++....+.++|+|+|=.+
T Consensus 33 ~~~i~C~DsRv~~~~~~~~-~~Gd~fv~Rn~gn~v~~~~~~sl~~av~~l~v~~IvV~gH~~ 93 (166)
T 3las_A 33 VAIVTCMDSRLHVAPALGL-ALGDAHILRNAGGRVTDDVIRSLVISEQQLGTSEIVVLHHTD 93 (166)
T ss_dssp EEEEEECCTTCCHHHHHTC-CTTSEEEEEEGGGCCCHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred EEEEEecCCCCCHHHHcCC-CCCcEEEEEccCcccChhhHHHHHHHHHhcCCCEEEEEeecC
Confidence 488999999 565543221 123 3344422 222237788899998889999999999655
No 44
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=44.59 E-value=19 Score=27.87 Aligned_cols=46 Identities=13% Similarity=0.042 Sum_probs=30.5
Q ss_pred ccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHH
Q psy16241 27 YWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEIT 73 (186)
Q Consensus 27 ~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~ 73 (186)
+.||+||+.- +..+...+.+++.|++++.++.....|....++.+-
T Consensus 59 l~PDLIi~~~-~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg 104 (260)
T 2q8p_A 59 LKPTHVLSVS-TIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLG 104 (260)
T ss_dssp TCCSEEEEEG-GGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHH
T ss_pred cCCCEEEecC-ccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHH
Confidence 7899999853 234556678888898877765444456555555543
No 45
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=44.16 E-value=49 Score=24.24 Aligned_cols=44 Identities=14% Similarity=0.149 Sum_probs=31.8
Q ss_pred HHHHhcCCceeeCC--------CCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 45 GRFLALGSDIVPTP--------DQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 45 ~~~~~~g~~i~~~p--------dkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+.+...|.+++.-| .|..+|..+|++.......++.++|+.+-|
T Consensus 68 ~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~ 119 (165)
T 2qip_A 68 HILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIAPDVDRVILVSGDG 119 (165)
T ss_dssp HHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHGGGCSEEEEECCCG
T ss_pred HHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhhccCCEEEEEECCh
Confidence 55667787665333 579999999999775445678888877755
No 46
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=42.50 E-value=30 Score=28.15 Aligned_cols=44 Identities=14% Similarity=0.162 Sum_probs=30.9
Q ss_pred ccccEEEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHH
Q psy16241 27 YWPDLVTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEI 72 (186)
Q Consensus 27 ~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~ 72 (186)
+.||+||+.-. .++..+.+++.|++++.++.+...|....++.+
T Consensus 115 l~PDLIi~~~~--~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~l 158 (335)
T 4hn9_A 115 ATPDVVFLPMK--LKKTADTLESLGIKAVVVNPEDQSLLEECITLV 158 (335)
T ss_dssp TCCSEEEEEGG--GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHH
T ss_pred cCCCEEEEeCc--chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHH
Confidence 78999998643 466778899889998886544555555555443
No 47
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=42.48 E-value=61 Score=25.58 Aligned_cols=48 Identities=6% Similarity=0.032 Sum_probs=36.5
Q ss_pred hHHHHHHHhcCCceeeC-CC-------CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 41 SNSMGRFLALGSDIVPT-PD-------QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 41 ~~~~~~~~~~g~~i~~~-pd-------kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+.+.++++++|.+++.+ +. -|+.|+..++-.+.....++.-++++++|
T Consensus 23 ~~i~~~L~~~G~eV~D~G~~s~~d~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTG 78 (216)
T 2ppw_A 23 DSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTG 78 (216)
T ss_dssp HHHHHHHHHHTCEEEECSCCSCTTCCCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCc
Confidence 45668899999988876 32 16778888887777645678889999998
No 48
>2p4g_A Hypothetical protein; pyrimidine reductase-like protein, structural genomics, JOIN for structural genomics, JCSG; 2.30A {Corynebacterium diphtheriae}
Probab=39.71 E-value=57 Score=25.99 Aligned_cols=40 Identities=10% Similarity=0.241 Sum_probs=30.3
Q ss_pred HHHHhcCCceeeCCCCCccHHHHHHHHHHhhcCCCEEEEEEc
Q psy16241 45 GRFLALGSDIVPTPDQSYTDFQKAVMEITKREKIDYLISIVE 86 (186)
Q Consensus 45 ~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~ 86 (186)
+.+++.|+.++..++ +.-|+..+++.+.+ .|...|.|-|+
T Consensus 157 ~~l~~~gv~vi~~~~-~~~dl~~~l~~L~~-~g~~~vlvEGG 196 (270)
T 2p4g_A 157 QKLIDVGVEVIVAPT-STNPLKIAFDALHA-RRLKKISIEGG 196 (270)
T ss_dssp HHHHHHTCCEEEECS-SSCHHHHHHHHHHT-TTCCEEEEEEC
T ss_pred HHHHhCCCEEEEcCC-CCCCHHHHHHHHHH-CCCCEEEEecC
Confidence 445666888776553 44699999999887 69999998874
No 49
>3off_A LDLR chaperone BOCA; MESD, molecular chaperone, protein folding, YWTD propeller; 2.00A {Drosophila melanogaster} PDB: 3ofe_A*
Probab=37.60 E-value=7.2 Score=26.75 Aligned_cols=45 Identities=7% Similarity=0.088 Sum_probs=33.4
Q ss_pred CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeeeEEecceEe
Q psy16241 106 LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQVYSTGLKWN 162 (186)
Q Consensus 106 ~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~vt~~Glky~ 162 (186)
...++++++..+|.++ .|++.+....-+ --.+.|..||++|=+|+
T Consensus 45 ~~ry~Id~dr~ifmf~--DGs~a~e~kdfL----------~~Q~~~~~vtiE~q~y~ 89 (90)
T 3off_A 45 AERYMVDDNRAIFLFK--DGTQAWDAKDFL----------IEQERCKGVTIENKEYP 89 (90)
T ss_dssp EEEEEEETTEEEEEES--SGGGHHHHHHHH----------TTSTTEEEEEETTEEEE
T ss_pred EEEEEecCCEEEEEEc--ChHHHHHHHHHH----------hcCcceeEEEEeccCcC
Confidence 7889999999999999 998765543111 12345678999998886
No 50
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=36.58 E-value=57 Score=26.10 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=24.7
Q ss_pred ccccEEEccCCCCChHHHHHHHhcCCceeeCC
Q psy16241 27 YWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP 58 (186)
Q Consensus 27 ~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p 58 (186)
+.||+||+.- +..++..+.+++.|++++.++
T Consensus 83 l~PDlIi~~~-~~~~~~~~~L~~~Gipvv~~~ 113 (326)
T 3psh_A 83 LKPDVVFVTN-YAPSEMIKQISDVNIPVVAIS 113 (326)
T ss_dssp TCCSEEEEET-TCCHHHHHHHHTTTCCEEEEC
T ss_pred cCCCEEEEeC-CCChHHHHHHHHcCCCEEEEe
Confidence 7899999863 335677889999999998865
No 51
>2azn_A HTP reductase, putative 5-amino-6-(5-phosphoribosylamino)uracil; oxidoreductase; HET: MA5 NAP EPE; 2.70A {Methanocaldococcus jannaschii} SCOP: c.71.1.2
Probab=35.30 E-value=84 Score=23.87 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=28.0
Q ss_pred hcCCceeeCCCCCccHHHHHHHHHHhhcCCCEEEEEEc
Q psy16241 49 ALGSDIVPTPDQSYTDFQKAVMEITKREKIDYLISIVE 86 (186)
Q Consensus 49 ~~g~~i~~~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~ 86 (186)
+.|+.++..++ +.-|+..+++.+.+ .|...|.|-|+
T Consensus 116 ~~~~~v~~~~~-~~~dl~~~l~~L~~-~g~~~ilveGG 151 (219)
T 2azn_A 116 DMGVEVVKCGR-GKVDLKKLMDILYD-KGIKSILLEGG 151 (219)
T ss_dssp HTTCEEEECCS-SSCCHHHHHHHHHH-TTCCEEEEEEC
T ss_pred cCCeEEEEcCC-CCcCHHHHHHHHHH-cCCCEEEEeeC
Confidence 55777776653 45789999999887 59999998874
No 52
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=34.53 E-value=14 Score=28.79 Aligned_cols=61 Identities=21% Similarity=0.275 Sum_probs=30.7
Q ss_pred EEcc-CCCCC---hHHHHHHHhcCCceeeC--CC-C-----CccHHHHHHHHHHhhcC---CCEEEEEEcCCCchhH
Q psy16241 32 VTGD-FDSVS---SNSMGRFLALGSDIVPT--PD-Q-----SYTDFQKAVMEITKREK---IDYLISIVEFNGRLDH 93 (186)
Q Consensus 32 iiGD-fDSi~---~~~~~~~~~~g~~i~~~--pd-k-----D~TD~e~Al~~~~~~~~---~~~i~v~G~~GgR~DH 93 (186)
+||+ |-|-. ....+-+.+.|+.+.-. .+ + +..|.++|++.+.+.++ -++..++|++ ||..|
T Consensus 120 vVG~GM~~~~GVaak~F~aLa~~~INI~mIstSEi~IS~vV~~~d~~~Av~aLH~~F~L~~~~~~~v~~Gt-G~v~~ 195 (200)
T 4go7_X 120 LIGAGMRSHPGVTATFCEALAAVGVNIELISTSEIRISVLCRDTELDKAVVALHEAFGLGGDEEATVYAGT-GRLEH 195 (200)
T ss_dssp EEEESCTTCHHHHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGGGHHHHHHHHHHHHTC----CCEECC-C------
T ss_pred eeccccccCCCcHHHHHHHHHHCCCCEEEEEccCCEEEEEEeHHHHHHHHHHHHHHhCCCCCceEEEEEcc-cccee
Confidence 6665 33322 22334566666655432 12 1 56889999998876644 3456777654 67877
No 53
>3ofh_A LDLR chaperone MESD; molecular chaperone, protein folding, YWTD propeller; 2.01A {Mus musculus}
Probab=33.97 E-value=4.8 Score=27.60 Aligned_cols=45 Identities=13% Similarity=0.273 Sum_probs=33.6
Q ss_pred CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeeeEEecceEe
Q psy16241 106 LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQVYSTGLKWN 162 (186)
Q Consensus 106 ~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~vt~~Glky~ 162 (186)
.+.++++++..+|.++ .|++.+.... + +--.+.|..||++|=+|+
T Consensus 44 ~~ry~I~~dr~ifm~~--DGs~awe~kd-F---------L~~Q~~v~~vtiegq~y~ 88 (89)
T 3ofh_A 44 VQRFIVGSDRAIFMLR--DGSYAWEIKD-F---------LVSQDRCAEVTLEGQMYP 88 (89)
T ss_dssp EEEEECSTTEEEEEES--CGGGHHHHHH-H---------HHTSTTEEEEEETTEEEC
T ss_pred EEEEEecCCEEEEEEc--ChHHHHHHHH-H---------HHcCcceeEEEEeccCcC
Confidence 7899999999999999 9987554331 1 112345778999998886
No 54
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=33.09 E-value=77 Score=22.79 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=36.9
Q ss_pred HHHHHHhcCCceeeCC-C-CCc--cHHHHHHHHHHhhcCCCEEEEEEcCCCchhHHHHHHHH
Q psy16241 43 SMGRFLALGSDIVPTP-D-QSY--TDFQKAVMEITKREKIDYLISIVEFNGRLDHCMSNINT 100 (186)
Q Consensus 43 ~~~~~~~~g~~i~~~p-d-kD~--TD~e~Al~~~~~~~~~~~i~v~G~~GgR~DH~l~ni~~ 100 (186)
..+.+++.|...+.+| | .+. .+.+.+++.+.++.|- .|+|-.+.|.|- -.+..+..
T Consensus 59 ~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~r~-~~l~~~~~ 118 (157)
T 3gxh_A 59 EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLANYRA-SAFAYLYQ 118 (157)
T ss_dssp HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBSHHH-HHHHHHHH
T ss_pred HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCCCCH-HHHHHHHH
Confidence 3556777788887777 4 344 5677788877765666 888888866543 34444443
No 55
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=32.72 E-value=1.1e+02 Score=23.94 Aligned_cols=47 Identities=11% Similarity=0.179 Sum_probs=35.3
Q ss_pred HHHHHHHhcCCceeeC---CC----CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 42 NSMGRFLALGSDIVPT---PD----QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 42 ~~~~~~~~~g~~i~~~---pd----kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
.+.++++++|.+++.+ |+ -|+.|+..++-.+.....++.-++++++|
T Consensus 24 ~l~~~L~~~G~eV~D~G~~~~~~~~~dYpd~a~~vA~~V~~g~~d~GIliCGTG 77 (214)
T 3ono_A 24 ELNSVAGGLGHDVFNVGMTDENDHHLTYIHLGIMASILLNSKAVDFVVTGCGTG 77 (214)
T ss_dssp HHHHHHHHTTCEEEECSCSSTTSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred HHHHHHHHCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 5667888999888875 22 36778888887777645578888899998
No 56
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=32.28 E-value=13 Score=31.87 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=36.0
Q ss_pred CCCChHHHHHHHhcCCceeeC---CCCCccHHHHHHHHHHhhcCCCEEEEEEcCC-CchhH
Q psy16241 37 DSVSSNSMGRFLALGSDIVPT---PDQSYTDFQKAVMEITKREKIDYLISIVEFN-GRLDH 93 (186)
Q Consensus 37 DSi~~~~~~~~~~~g~~i~~~---pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G-gR~DH 93 (186)
||-+.-....+++.|.++..+ || |.-.+..||+.+.+ .++-|++.|+.| |.-|+
T Consensus 210 Dsn~~~L~~~l~~~G~~v~~~~iv~D-d~~~i~~~l~~a~~--~~DlvittGG~s~g~~D~ 267 (396)
T 1wu2_A 210 ETNSIMLQGLVEKFFGEPILYGVLPD-DESIIKETLEKAKN--ECDIVLITGGSAFGDKDY 267 (396)
T ss_dssp CCHHHHHHHHHHHTTCEEEEEEEECS-CHHHHTTHHHHHHH--CSEEEECC--------CC
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCC-CHHHHHHHHHHHhh--CCCEEEEeCCCCCChhhH
Confidence 665566677888899877764 44 66778889998876 488999999998 78999
No 57
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=30.67 E-value=75 Score=26.47 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=39.9
Q ss_pred ccEEEccCCCCC-----hHHHHHHHhcCCceeeC----CCCCccHHHHHHHHHHhhcCCCEEEEEEcCCC-chhH
Q psy16241 29 PDLVTGDFDSVS-----SNSMGRFLALGSDIVPT----PDQSYTDFQKAVMEITKREKIDYLISIVEFNG-RLDH 93 (186)
Q Consensus 29 Pd~iiGDfDSi~-----~~~~~~~~~~g~~i~~~----pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~Gg-R~DH 93 (186)
--++|.|=.+.. +.+.+.+++.|+.+..+ |+++....+.+++.+.+ .+++-|+-+| || =+|=
T Consensus 42 ~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~-~~~d~IIavG--GGsv~D~ 113 (371)
T 1o2d_A 42 RALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRN-DSFDFVVGLG--GGSPMDF 113 (371)
T ss_dssp EEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTT-SCCSEEEEEE--SHHHHHH
T ss_pred EEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHh-cCCCEEEEeC--ChHHHHH
Confidence 345566543433 44556677777766543 57888889999999887 5777766555 44 3553
No 58
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A*
Probab=30.33 E-value=72 Score=24.79 Aligned_cols=58 Identities=12% Similarity=-0.028 Sum_probs=36.1
Q ss_pred cEEEccCCC-CChHHHHHHHhcC-CceeeCC-CCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 30 DLVTGDFDS-VSSNSMGRFLALG-SDIVPTP-DQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 30 d~iiGDfDS-i~~~~~~~~~~~g-~~i~~~p-dkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
-++||-.|| +.++..-.. ..| +.+++-. ..=..|.--++.++....+.++|+|+|=.+
T Consensus 30 ~~vi~C~DsRv~~~~i~~~-~~Gd~fviRNaGn~v~~~~~~sl~~av~~L~v~~IvV~GHt~ 90 (204)
T 3teo_A 30 LWVLTCMDERVHIEQSLGI-QPDDAHIYRNAGGIVTDDAIRSASLTTNFFGTKEIIVVTHTD 90 (204)
T ss_dssp EEEEEECCTTCCHHHHHTC-CTTSEEEEEESSSCCCHHHHHHHHHHHHHSCCCEEEEEEETT
T ss_pred EEEEEecCCCCCHHHHcCC-CCCCEEEEEeeCCccCcchhhHHHHHHHhcCCCEEEEEeecC
Confidence 577899999 555443322 223 3444522 222224445677777779999999999666
No 59
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=27.94 E-value=1.7e+02 Score=24.33 Aligned_cols=65 Identities=14% Similarity=0.192 Sum_probs=41.5
Q ss_pred CccccEEEccCCC------CChHHHHHHHhcCCceeeC----CCCCccHHHHHHHHHHhhcCCCEEEEEEcCCC-chhH
Q psy16241 26 LYWPDLVTGDFDS------VSSNSMGRFLALGSDIVPT----PDQSYTDFQKAVMEITKREKIDYLISIVEFNG-RLDH 93 (186)
Q Consensus 26 ~~~Pd~iiGDfDS------i~~~~~~~~~~~g~~i~~~----pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~Gg-R~DH 93 (186)
+...-++|.|=-+ .-+.+.+.+++.|+.+..+ |+++....+.+++.+.+ .+++-|+-+| || =+|=
T Consensus 32 g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~-~~~d~IIavG--GGsv~D~ 107 (387)
T 3bfj_A 32 GGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRR-EQCDIIVTVG--GGSPHDC 107 (387)
T ss_dssp TCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHH-TTCCEEEEEE--SHHHHHH
T ss_pred CCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHh-cCCCEEEEeC--CcchhhH
Confidence 4455677777433 2333445666777766443 46788889999999987 6888665555 44 3453
No 60
>4h59_A PIAA, iron-compound ABC transporter, iron compound-BIND protein; center for structural genomics of infectious diseases; HET: MSE B3P; 1.66A {Streptococcus pneumoniae}
Probab=27.73 E-value=1.1e+02 Score=23.62 Aligned_cols=45 Identities=7% Similarity=0.155 Sum_probs=27.0
Q ss_pred CccccEEEccCCCCChHHHHHHHhcCCceeeCC-CCCccHHHHHHHH
Q psy16241 26 LYWPDLVTGDFDSVSSNSMGRFLALGSDIVPTP-DQSYTDFQKAVME 71 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~~~~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~ 71 (186)
.+.||+||+......++..+.++..+ .+..++ .....+....++.
T Consensus 90 ~l~PDLIi~~~~~~~~~~~~~l~~i~-~~~~~~~~~~~~~~~~~i~~ 135 (308)
T 4h59_A 90 NSKPDVILAGYSGITKEDYDTLSKIA-PVAAYKSKPWQTLWRDMIKI 135 (308)
T ss_dssp HTCCSEEEESSCCCCHHHHHHHHTTS-CEEECSSSTTCCCHHHHHHH
T ss_pred hcCCCEEEecCccccHHHHHHhhccc-cceeecccccHHHHHHHHHH
Confidence 37899999987777777777766543 333333 3334444444443
No 61
>1ufz_A Hypothetical protein BAB28515; HBS1-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, translatio; NMR {Mus musculus} SCOP: a.5.9.1
Probab=27.23 E-value=33 Score=23.01 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=22.6
Q ss_pred EEccCCCCChHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHhh
Q psy16241 32 VTGDFDSVSSNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITKR 75 (186)
Q Consensus 32 iiGDfDSi~~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~ 75 (186)
|+|| |+++..+....- |..-|.++||+++++.
T Consensus 44 VlGd--sV~e~~Lv~ail----------k~dfD~ekALd~vL~~ 75 (83)
T 1ufz_A 44 VLGD--AVPDDILTEAIL----------KHKFDVQKALSVVLEQ 75 (83)
T ss_dssp HTTT--TSCHHHHHHHHH----------HTTSCHHHHHHHHHHH
T ss_pred HHcc--cCCHHHHHHHHH----------HhcCCHHHHHHHHHhc
Confidence 3787 888887643221 3667899999998864
No 62
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=26.84 E-value=85 Score=26.31 Aligned_cols=72 Identities=17% Similarity=0.213 Sum_probs=43.8
Q ss_pred CccccEEEccCCCCC-----hHHHHHHHhcCCceeeC----CCCCccHHHHHHHHHHhhcCCCEEEEEEcCCC-chhHHH
Q psy16241 26 LYWPDLVTGDFDSVS-----SNSMGRFLALGSDIVPT----PDQSYTDFQKAVMEITKREKIDYLISIVEFNG-RLDHCM 95 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~-----~~~~~~~~~~g~~i~~~----pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~Gg-R~DH~l 95 (186)
+..-=++|.|= ++. +.+.+.+++.|+.+..+ |++.....+.+++.+.+ .+++-|+-+| || =+|=.
T Consensus 30 g~~~~liVtd~-~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~-~~~D~IIavG--GGsv~D~a- 104 (383)
T 3ox4_A 30 GFKNALIVSDA-FMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKD-NNSDFVISLG--GGSPHDCA- 104 (383)
T ss_dssp CCCEEEEEEEH-HHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHH-HTCSEEEEEE--SHHHHHHH-
T ss_pred CCCEEEEEECC-chhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHh-cCcCEEEEeC--CcHHHHHH-
Confidence 33334566662 332 33455677778766443 57888999999999987 6888665444 45 34542
Q ss_pred HHHHHHH
Q psy16241 96 SNINTLY 102 (186)
Q Consensus 96 ~ni~~l~ 102 (186)
--++.++
T Consensus 105 K~ia~~~ 111 (383)
T 3ox4_A 105 KAIALVA 111 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 2344444
No 63
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=26.06 E-value=51 Score=24.50 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=32.3
Q ss_pred EEccCCCCChHHHHHHHhcCCceeeCCC-CCccHHHHHHHHHHhhcCCCEEEEEEcCCC
Q psy16241 32 VTGDFDSVSSNSMGRFLALGSDIVPTPD-QSYTDFQKAVMEITKREKIDYLISIVEFNG 89 (186)
Q Consensus 32 iiGDfDSi~~~~~~~~~~~g~~i~~~pd-kD~TD~e~Al~~~~~~~~~~~i~v~G~~Gg 89 (186)
||-.+||++....+++++.|+.+...|. .+..+...++ .. ...+.+++.|+-|.
T Consensus 5 iiDn~~s~~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l---~~-~~~~~iil~gGpg~ 59 (192)
T 1i1q_B 5 LLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRL---AT-MKNPVLMLSPGPGV 59 (192)
T ss_dssp EEECSCSSHHHHHHHHHHTTCEEEEEETTSCSHHHHHHH---TT-CSSEEEEECCCSSC
T ss_pred EEECCccHHHHHHHHHHHCCCeEEEEECCCCHHHHHHHh---hh-ccCCeEEECCCCcC
Confidence 4445899988888999999987776653 2222222221 11 12344777777765
No 64
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A
Probab=26.00 E-value=1.1e+02 Score=24.20 Aligned_cols=62 Identities=18% Similarity=0.063 Sum_probs=39.1
Q ss_pred Cccc-cEEEccCCC-CChHHHHHHHhcC-CceeeCC-C---CCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 26 LYWP-DLVTGDFDS-VSSNSMGRFLALG-SDIVPTP-D---QSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 26 ~~~P-d~iiGDfDS-i~~~~~~~~~~~g-~~i~~~p-d---kD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+-.| -++||=.|| +.++.+-.. ..| +.+++-. . .++.+..-+|+++....+.++|+|+|=.+
T Consensus 32 ~q~P~~~~i~C~DsRv~~e~i~~~-~~Gd~fv~Rnagn~v~~~d~~~~~sleyav~~L~v~~IvV~GHt~ 100 (229)
T 3e3i_A 32 HQTPHYLWIACSDSRVPAEKLTNL-EPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTN 100 (229)
T ss_dssp --CCCEEEEEETTCCSCHHHHHTC-CTTSEEEEEETTCCCCTTCHHHHHHHHHHHHTSCCCEEEEEEESS
T ss_pred CCCCCEEEEEecCCCCCHHHHcCC-CCCcEEEEEecccccCCCcchhHHHHHHHHHhcCCCEEEEECCCC
Confidence 3445 578999999 666554322 223 3344421 1 12345678899998889999999999554
No 65
>2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A*
Probab=25.86 E-value=1.2e+02 Score=25.33 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=28.2
Q ss_pred HHHhcCCceeeCCCCCccHHHHHHHHHHhhcCCCEEEEEEc
Q psy16241 46 RFLALGSDIVPTPDQSYTDFQKAVMEITKREKIDYLISIVE 86 (186)
Q Consensus 46 ~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~ 86 (186)
.++..|+.++.. .++..|++.+++.+.+ .+..+|+|.|+
T Consensus 266 ~l~~~gv~vi~~-~~~~~dl~~~l~~L~~-~g~~~vlveGG 304 (373)
T 2b3z_A 266 RLSAFGVNIFTL-ETERIQIPDVLKILAE-EGIMSVYVEGG 304 (373)
T ss_dssp HHHTTTCEEEEC-SSSSCCHHHHHHHHHH-TTCCEEEEEEC
T ss_pred HHHhCCcEEEEe-CCCCCCHHHHHHHHHH-CCCCEEEEEEh
Confidence 445556666655 2234689999999887 69999998875
No 66
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=25.49 E-value=77 Score=25.86 Aligned_cols=59 Identities=15% Similarity=-0.025 Sum_probs=31.2
Q ss_pred ccEEEccCCCCC----hHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 29 PDLVTGDFDSVS----SNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 29 Pd~iiGDfDSi~----~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
.=.+|..-.|=+ .+..+++++.|+.+.....+..-+.......+.. .+++-|+++|+-|
T Consensus 31 ~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDG 93 (332)
T 2bon_A 31 ASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDG 93 (332)
T ss_dssp CEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHH
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHHHHHHHHHh-cCCCEEEEEccch
Confidence 345666666643 2344567777877665432222233322233333 3677777777644
No 67
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=24.31 E-value=33 Score=24.53 Aligned_cols=17 Identities=18% Similarity=0.094 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhhcCCCE
Q psy16241 64 DFQKAVMEITKREKIDY 80 (186)
Q Consensus 64 D~e~Al~~~~~~~~~~~ 80 (186)
-+++|++.|.++.|++.
T Consensus 66 n~~~af~~Ae~~Lgi~~ 82 (127)
T 1wyq_A 66 NLQNAFNLAEKELGLTK 82 (127)
T ss_dssp HHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 46677777764456544
No 68
>1yk1_E Natriuretic peptides B; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, hormone-growth factor receptor complex; HET: NAG; 2.90A {Homo sapiens}
Probab=24.23 E-value=16 Score=19.17 Aligned_cols=9 Identities=22% Similarity=0.405 Sum_probs=6.5
Q ss_pred EcCCCchhH
Q psy16241 85 VEFNGRLDH 93 (186)
Q Consensus 85 G~~GgR~DH 93 (186)
|++|.|+|+
T Consensus 1 gCFG~riDR 9 (26)
T 1yk1_E 1 GCFGRKMDR 9 (26)
T ss_dssp CTTCSCCSS
T ss_pred CCcCccccc
Confidence 567778776
No 69
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=23.41 E-value=39 Score=23.89 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=19.1
Q ss_pred CccccEEEccCCCCChHHHHHHHhcCC
Q psy16241 26 LYWPDLVTGDFDSVSSNSMGRFLALGS 52 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi~~~~~~~~~~~g~ 52 (186)
.+.|.+.+|++.+..++.++.+++.|+
T Consensus 8 ~I~~~lylG~~~~~~~~d~~~L~~~gI 34 (154)
T 2r0b_A 8 EILPGLFLGPYSSAMKSKLPVLQKHGI 34 (154)
T ss_dssp EEETTEEEECGGGGSGGGHHHHHHTTC
T ss_pred eEeCCeEECCHHHhhhccHHHHHHcCC
Confidence 478999999988776555566665553
No 70
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=22.80 E-value=1.4e+02 Score=25.20 Aligned_cols=65 Identities=17% Similarity=0.165 Sum_probs=40.8
Q ss_pred CccccEEEccCCCC-----ChHHHHHHHhcCCceeeCC----CCCccHHHHHHHHHHhhcCCCEEEEEEcCCC-chhH
Q psy16241 26 LYWPDLVTGDFDSV-----SSNSMGRFLALGSDIVPTP----DQSYTDFQKAVMEITKREKIDYLISIVEFNG-RLDH 93 (186)
Q Consensus 26 ~~~Pd~iiGDfDSi-----~~~~~~~~~~~g~~i~~~p----dkD~TD~e~Al~~~~~~~~~~~i~v~G~~Gg-R~DH 93 (186)
+..--++|.|=.++ -+.+.+.+++.|+.+..++ ++.....+.+++.+.+ .+++-|+-+| || =+|=
T Consensus 42 g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~-~~~D~IIavG--GGsviD~ 116 (407)
T 1vlj_A 42 GIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKK-EKVEAVLGVG--GGSVVDS 116 (407)
T ss_dssp TCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHH-TTCSEEEEEE--SHHHHHH
T ss_pred CCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHh-cCCCEEEEeC--ChhHHHH
Confidence 43445666663333 3344556677777765543 5677889999999887 6888666555 44 4554
No 71
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=22.79 E-value=1.8e+02 Score=22.87 Aligned_cols=52 Identities=13% Similarity=0.138 Sum_probs=34.4
Q ss_pred CCCCCccHHHHHHHHHHhhcCCCEEEEEEcCCCchhHHHHHHHHHHhcCCCEEEE
Q psy16241 57 TPDQSYTDFQKAVMEITKREKIDYLISIVEFNGRLDHCMSNINTLYKSSLPIYLL 111 (186)
Q Consensus 57 ~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~GgR~DH~l~ni~~l~~~~~~i~l~ 111 (186)
.|||..++ .+++.+.+ .|.+-|.|=|..|=+.|+++.-+..+-++..++++.
T Consensus 14 DPdk~~~~--~~~~~~~~-~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlf 65 (228)
T 3vzx_A 14 DPNKDLPD--EQLEILCE-SGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLE 65 (228)
T ss_dssp CTTSCCCT--THHHHHHT-SSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEE
T ss_pred CCCCCCCH--HHHHHHHH-cCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEe
Confidence 68887665 35555555 678876544444447888887777776655777763
No 72
>3n57_C Atrial natriuretic factor; insulysin, insulinase, A-beta degrading enzyme, cryptidase, hydrolase, hormone, disease mutation, diabetes mellitus; 3.03A {Homo sapiens} PDB: 1anp_A
Probab=22.19 E-value=20 Score=19.02 Aligned_cols=10 Identities=40% Similarity=0.700 Sum_probs=8.2
Q ss_pred EEcCCCchhH
Q psy16241 84 IVEFNGRLDH 93 (186)
Q Consensus 84 ~G~~GgR~DH 93 (186)
-|++|.|+|+
T Consensus 5 ~gCFG~riDR 14 (28)
T 3n57_C 5 SSCFGGRMDR 14 (28)
T ss_pred ccccCccccc
Confidence 3788999998
No 73
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A
Probab=21.69 E-value=82 Score=25.02 Aligned_cols=61 Identities=13% Similarity=-0.071 Sum_probs=40.0
Q ss_pred Cccc-cEEEccCCC-CChHHHHHHHhcC-Cceee-----CCCCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 26 LYWP-DLVTGDFDS-VSSNSMGRFLALG-SDIVP-----TPDQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 26 ~~~P-d~iiGDfDS-i~~~~~~~~~~~g-~~i~~-----~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
+-.| -++||=.|| +.++.+-.. ..| +.+++ .|. ++.+..-+|+||....+.++|+|+|=.+
T Consensus 62 gQ~P~~lvI~CsDSRV~pe~i~~~-~pGdlFViRNaGN~V~~-~d~~~~asleyAV~~L~V~~IvV~GHs~ 130 (243)
T 2w3q_A 62 GQAPNFLWIGCADSRVPEVTIMAR-KPGDVFVQRNVANQFKP-EDDSSQALLNYAIMNVGVTHVMVVGHTG 130 (243)
T ss_dssp CCCCSEEEEEECCTTCCHHHHTTC-CTTSEEEEEEGGGCCCT-TCHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred CCCCCEEEEEecCCCCCHHHHcCC-CCCcEEEEeccCcccCC-CCchhHHHHHHHHHhcCCCEEEEeccCC
Confidence 3445 578999999 666543211 223 33333 122 3456778999999989999999998554
No 74
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=21.41 E-value=1.8e+02 Score=22.25 Aligned_cols=62 Identities=8% Similarity=0.098 Sum_probs=42.9
Q ss_pred cEEEccCCCCChHHHHHHHhcCCceeeC----CC-----CCccHHHHHHHHHHhhcCCCEEEEEEcCCCchhH
Q psy16241 30 DLVTGDFDSVSSNSMGRFLALGSDIVPT----PD-----QSYTDFQKAVMEITKREKIDYLISIVEFNGRLDH 93 (186)
Q Consensus 30 d~iiGDfDSi~~~~~~~~~~~g~~i~~~----pd-----kD~TD~e~Al~~~~~~~~~~~i~v~G~~GgR~DH 93 (186)
=+..||.--..++.++.++.+++.+... ++ ...++.+.|++.+.+ .+.+.++ +-=++-|.|+
T Consensus 159 i~~~GDt~~~~~~~~~~l~~~~~Dlli~e~t~~~~~~~~~~H~~~~~a~~~~~~-~~~k~li-l~H~s~~~~~ 229 (258)
T 3g1p_A 159 VAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQV-IRSPRVI-LTHISHQFDA 229 (258)
T ss_dssp EEEECSCSSCCHHHHHHHHHTCCSEEEEECCBSSCSSCCSSSCBHHHHHHHHHH-HCCSCEE-EESCCHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHhCCCCEEEEeCCCCCccccCCCCCCHHHHHHHHHH-cCCCEEE-EECccCccch
Confidence 3678999888887777776556665542 21 234788999999887 5777755 5556667775
No 75
>3ofg_A BOCA/MESD chaperone for YWTD beta-propeller-EGF P; molecular chaperone, protein folding, YWTD propeller, LDLR; HET: MSE; 1.37A {Caenorhabditis elegans}
Probab=20.94 E-value=10 Score=26.21 Aligned_cols=45 Identities=11% Similarity=0.237 Sum_probs=32.2
Q ss_pred CCEEEEcCCeEEEEEecCCCeEEEEeCCCCCCCCCEEEEEecCCceeeeEEecceEe
Q psy16241 106 LPIYLLSAKYMSWVLRANAGLHRIHLNPGFTSGKKTLGLIPVGSPVQQVYSTGLKWN 162 (186)
Q Consensus 106 ~~i~l~~~~~~i~~l~~~~g~~~i~~~~~~~~~~~~~Sl~pl~~~~~~vt~~Glky~ 162 (186)
...++++++..+|.+. .|++.+....-+ -=.+.|..||++|=.|+
T Consensus 50 ~qrf~I~d~raiFmf~--DGsqAweakdfL----------~~Qd~~~~VtiEgq~y~ 94 (95)
T 3ofg_A 50 LQVFVIDDNRAIFMFK--NGEQAFEAKKFL----------LKQEFVSEVTIEGQSFD 94 (95)
T ss_dssp EEEEEEETTEEEEEES--SGGGHHHHHHHH----------HTSTTEEEEEEECCSSC
T ss_pred EEEEEecCCEEEEEEc--ChHHHHHHHHHH----------hcCcceeEEEEeccccC
Confidence 7889999999999999 898765433111 12345677888887775
No 76
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=20.84 E-value=2.7e+02 Score=20.92 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=48.6
Q ss_pred ccccEEEccCCCC-ChH----HHHHHHhcCCceeeCC-CCCccHHHHHHHHHHhhcCCCEEEEEEcCCCchhHHHHHHHH
Q psy16241 27 YWPDLVTGDFDSV-SSN----SMGRFLALGSDIVPTP-DQSYTDFQKAVMEITKREKIDYLISIVEFNGRLDHCMSNINT 100 (186)
Q Consensus 27 ~~Pd~iiGDfDSi-~~~----~~~~~~~~g~~i~~~p-dkD~TD~e~Al~~~~~~~~~~~i~v~G~~GgR~DH~l~ni~~ 100 (186)
..--+++-++++- -.. ..+..+++|..++.+. +.|.......++.+.+ .+++-|++.+....-.+.....+..
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~~vdgiIi~~~~~~~~~~~~~~~~~ 94 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLS-QHIDGLIVEPTKSALQTPNIGYYLN 94 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHH-TCCSEEEECCSSTTSCCTTHHHHHH
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHH-CCCCEEEEecccccccCCcHHHHHH
Confidence 3445566666542 122 2245566787777654 4344444556666666 6899988877654312222233444
Q ss_pred HHhcCCCEEEEcCC
Q psy16241 101 LYKSSLPIYLLSAK 114 (186)
Q Consensus 101 l~~~~~~i~l~~~~ 114 (186)
+....+++++++..
T Consensus 95 ~~~~~iPvV~~~~~ 108 (298)
T 3tb6_A 95 LEKNGIPFAMINAS 108 (298)
T ss_dssp HHHTTCCEEEESSC
T ss_pred HHhcCCCEEEEecC
Confidence 55555788887753
No 77
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=20.34 E-value=31 Score=24.14 Aligned_cols=17 Identities=12% Similarity=-0.154 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhhcCCCE
Q psy16241 64 DFQKAVMEITKREKIDY 80 (186)
Q Consensus 64 D~e~Al~~~~~~~~~~~ 80 (186)
-+++|++.|.++.|++.
T Consensus 66 n~~~af~~Ae~~lgi~~ 82 (116)
T 1wyl_A 66 ATAWALKVAENELGITP 82 (116)
T ss_dssp HHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHcCCcc
Confidence 36677777765456654
No 78
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=20.31 E-value=31 Score=24.36 Aligned_cols=18 Identities=22% Similarity=-0.007 Sum_probs=11.3
Q ss_pred HHHHHHHHHHhhcCCCEE
Q psy16241 64 DFQKAVMEITKREKIDYL 81 (186)
Q Consensus 64 D~e~Al~~~~~~~~~~~i 81 (186)
-+++|++.|.++.|++.+
T Consensus 68 n~~~af~~Ae~~lgi~~l 85 (121)
T 2d88_A 68 NNQLAFDIAEKELGISPI 85 (121)
T ss_dssp HHHHHHHHHHHHTCCCCS
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 356777777654666553
No 79
>1yk0_E Atrial natriuretic factor; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, hormone-growth factor receptor complex; HET: NAG; 2.40A {Homo sapiens} PDB: 1t34_H*
Probab=20.10 E-value=20 Score=18.72 Aligned_cols=9 Identities=44% Similarity=0.844 Sum_probs=6.0
Q ss_pred EcCCCchhH
Q psy16241 85 VEFNGRLDH 93 (186)
Q Consensus 85 G~~GgR~DH 93 (186)
|++|.|+|+
T Consensus 1 gCFG~riDR 9 (26)
T 1yk0_E 1 SCFGGRMDR 9 (26)
T ss_dssp CTTCSCCCC
T ss_pred CCcCccccc
Confidence 456777776
No 80
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=20.08 E-value=26 Score=24.29 Aligned_cols=18 Identities=17% Similarity=0.135 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhhcCCCEE
Q psy16241 64 DFQKAVMEITKREKIDYL 81 (186)
Q Consensus 64 D~e~Al~~~~~~~~~~~i 81 (186)
-+++|++.|.++.|++.+
T Consensus 62 n~~~af~~Ae~~lgi~~l 79 (109)
T 1bkr_A 62 NLQNAFNLAEQHLGLTKL 79 (109)
T ss_dssp HHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHcCCCcc
Confidence 367788877654676653
No 81
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=20.01 E-value=88 Score=25.48 Aligned_cols=57 Identities=12% Similarity=0.037 Sum_probs=30.1
Q ss_pred EEEccCCCCC-------hHHHHHHHhcCCceeeCCCCCccHHHHHHHHHHhhcCCCEEEEEEcCC
Q psy16241 31 LVTGDFDSVS-------SNSMGRFLALGSDIVPTPDQSYTDFQKAVMEITKREKIDYLISIVEFN 88 (186)
Q Consensus 31 ~iiGDfDSi~-------~~~~~~~~~~g~~i~~~pdkD~TD~e~Al~~~~~~~~~~~i~v~G~~G 88 (186)
++|-.-.|=+ .+..+.+++.|..+.....+..-+.......+.. .+++-|+++|+-|
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~-~~~d~vvv~GGDG 91 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMH-ENYDVLIAAGGDG 91 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTT-TTCSEEEEEECHH
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhh-cCCCEEEEEcCch
Confidence 4666666642 2334566777766655432222243332333333 4678888888754
Done!