Your job contains 1 sequence.
>psy16242
MSMMRSCVPAKDEHHHHPESFYPYHTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRRER
VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM
GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI
LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPL
IGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFI
AEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDR
VPIDSKFAEIANSNSQFKCPPPK
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16242
(383 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015519 - symbol:nAcRalpha-7E "nicotinic Acetylcho... 761 6.3e-104 3
FB|FBgn0000036 - symbol:nAcRalpha-96Aa "nicotinic Acetylc... 684 8.1e-87 2
FB|FBgn0037212 - symbol:nAcRalpha-80B "nicotinic Acetylch... 840 7.2e-84 1
FB|FBgn0004118 - symbol:nAcRbeta-96A "nicotinic Acetylcho... 818 1.5e-81 1
FB|FBgn0000039 - symbol:nAcRalpha-96Ab "nicotinic Acetylc... 620 1.1e-76 2
WB|WBGene00006797 - symbol:unc-63 species:6239 "Caenorhab... 726 8.6e-72 1
WB|WBGene00006774 - symbol:unc-38 species:6239 "Caenorhab... 568 5.3e-71 2
UNIPROTKB|P18845 - symbol:chrna3 "Neuronal acetylcholine ... 550 9.8e-66 2
ZFIN|ZDB-GENE-070822-1 - symbol:chrna3 "cholinergic recep... 527 9.8e-66 2
ZFIN|ZDB-GENE-090312-91 - symbol:chrna6 "cholinergic rece... 540 1.1e-64 2
UNIPROTKB|E2RC61 - symbol:CHRNA6 "Uncharacterized protein... 535 1.1e-64 2
UNIPROTKB|F1PNA0 - symbol:CHRNA6 "Uncharacterized protein... 535 1.1e-64 2
UNIPROTKB|F1P8T5 - symbol:CHRNA3 "Uncharacterized protein... 516 3.0e-64 3
UNIPROTKB|F1MQ06 - symbol:CHRNA6 "Uncharacterized protein... 648 1.6e-63 1
UNIPROTKB|F1M4L2 - symbol:Chrna3 "Neuronal acetylcholine ... 520 2.6e-63 2
UNIPROTKB|Q19AE6 - symbol:CHRNA4 "Neuronal acetylcholine ... 501 6.9e-63 2
UNIPROTKB|F1NWY0 - symbol:CHRNA3 "Neuronal acetylcholine ... 515 1.1e-62 2
UNIPROTKB|P43681 - symbol:CHRNA4 "Neuronal acetylcholine ... 507 1.4e-62 2
UNIPROTKB|Q5IS77 - symbol:CHRNA4 "Neuronal acetylcholine ... 507 1.4e-62 2
UNIPROTKB|F1LQT8 - symbol:Chrna4 "Neuronal acetylcholine ... 505 1.8e-62 2
MGI|MGI:87888 - symbol:Chrna4 "cholinergic receptor, nico... 505 1.8e-62 2
RGD|2345 - symbol:Chrna3 "cholinergic receptor, nicotinic... 638 1.8e-62 1
UNIPROTKB|E1BHK0 - symbol:CHRNA4 "Uncharacterized protein... 505 2.3e-62 2
RGD|2346 - symbol:Chrna4 "cholinergic receptor, nicotinic... 504 2.3e-62 2
UNIPROTKB|P09483 - symbol:Chrna4 "Neuronal acetylcholine ... 504 2.3e-62 2
UNIPROTKB|F1PFF3 - symbol:CHRNA4 "Uncharacterized protein... 499 2.3e-62 2
UNIPROTKB|F1NQD3 - symbol:CHRNA6 "Neuronal acetylcholine ... 637 2.3e-62 1
MGI|MGI:87887 - symbol:Chrna3 "cholinergic receptor, nico... 637 2.3e-62 1
UNIPROTKB|F1M7K6 - symbol:Chrna3 "Neuronal acetylcholine ... 637 2.3e-62 1
UNIPROTKB|E1BJF7 - symbol:CHRNA3 "Neuronal acetylcholine ... 516 2.9e-62 2
UNIPROTKB|F1RKU8 - symbol:CHRNA3 "Uncharacterized protein... 636 3.0e-62 1
UNIPROTKB|I3LN85 - symbol:CHRNA6 "Uncharacterized protein... 636 3.0e-62 1
UNIPROTKB|P09480 - symbol:CHRNA2 "Neuronal acetylcholine ... 505 3.7e-62 2
UNIPROTKB|P49581 - symbol:CHRNA6 "Neuronal acetylcholine ... 635 3.8e-62 1
UNIPROTKB|G1K2Z1 - symbol:CHRNA3 "Neuronal acetylcholine ... 634 4.8e-62 1
UNIPROTKB|P09481 - symbol:CHRNA3 "Neuronal acetylcholine ... 634 4.8e-62 1
UNIPROTKB|Q5IS76 - symbol:CHRNA6 "Neuronal acetylcholine ... 632 7.9e-62 1
UNIPROTKB|F1P8T6 - symbol:CHRNA3 "Uncharacterized protein... 630 1.3e-61 1
ZFIN|ZDB-GENE-041001-99 - symbol:chrna2b "cholinergic rec... 510 2.0e-61 2
RGD|69281 - symbol:Chrna6 "cholinergic receptor, nicotini... 626 3.4e-61 1
UNIPROTKB|P43143 - symbol:Chrna6 "Neuronal acetylcholine ... 626 3.4e-61 1
UNIPROTKB|P09482 - symbol:CHRNA4 "Neuronal acetylcholine ... 505 5.4e-61 2
UNIPROTKB|Q15825 - symbol:CHRNA6 "Neuronal acetylcholine ... 624 5.5e-61 1
ZFIN|ZDB-GENE-040108-2 - symbol:chrna2a "cholinergic rece... 496 6.9e-61 2
UNIPROTKB|F1RJS5 - symbol:CHRNA2 "Uncharacterized protein... 499 1.1e-60 2
ZFIN|ZDB-GENE-090505-3 - symbol:chrna4 "cholinergic recep... 498 2.3e-60 2
ZFIN|ZDB-GENE-090312-169 - symbol:chrnb2a "cholinergic re... 482 2.3e-60 2
UNIPROTKB|Q19AE5 - symbol:CHRNB2 "Cholinergic receptor ni... 478 4.8e-60 2
UNIPROTKB|F1N9F1 - symbol:CHRNA2 "Neuronal acetylcholine ... 615 5.0e-60 1
UNIPROTKB|E2R3I1 - symbol:CHRNA2 "Uncharacterized protein... 494 6.1e-60 2
ZFIN|ZDB-GENE-070821-3 - symbol:chrnb2b "cholinergic rece... 479 7.8e-60 2
UNIPROTKB|F1PQB1 - symbol:CHRNB2 "Uncharacterized protein... 478 7.8e-60 2
MGI|MGI:87891 - symbol:Chrnb2 "cholinergic receptor, nico... 476 7.8e-60 2
UNIPROTKB|J3KMY9 - symbol:CHRNA2 "Neuronal acetylcholine ... 489 9.9e-60 2
UNIPROTKB|Q15822 - symbol:CHRNA2 "Neuronal acetylcholine ... 489 9.9e-60 2
MGI|MGI:87886 - symbol:Chrna2 "cholinergic receptor, nico... 490 1.3e-59 2
RGD|621533 - symbol:Chrna2 "cholinergic receptor, nicotin... 490 8.8e-59 2
MGI|MGI:106213 - symbol:Chrna6 "cholinergic receptor, nic... 603 9.3e-59 1
UNIPROTKB|P19370 - symbol:chrnb2 "Neuronal acetylcholine ... 463 2.3e-58 2
UNIPROTKB|P26153 - symbol:CHRNB4 "Neuronal acetylcholine ... 467 6.1e-58 2
UNIPROTKB|P32297 - symbol:CHRNA3 "Neuronal acetylcholine ... 594 8.4e-58 1
UNIPROTKB|F1N4T3 - symbol:CHRNA2 "Uncharacterized protein... 474 9.9e-58 2
FB|FBgn0000038 - symbol:nAcRbeta-64B "nicotinic Acetylcho... 464 9.9e-58 2
UNIPROTKB|F1RGM6 - symbol:CHRNB2 "Uncharacterized protein... 593 1.1e-57 1
UNIPROTKB|F1MYI7 - symbol:CHRNA3 "Neuronal acetylcholine ... 591 1.7e-57 1
UNIPROTKB|Q07263 - symbol:CHRNA3 "Neuronal acetylcholine ... 591 1.7e-57 1
UNIPROTKB|F1NAQ7 - symbol:CHRNB4 "Neuronal acetylcholine ... 461 2.6e-57 2
UNIPROTKB|F1NWX4 - symbol:CHRNB4 "Neuronal acetylcholine ... 461 2.6e-57 2
UNIPROTKB|F1P4U2 - symbol:CHRNB4 "Neuronal acetylcholine ... 461 2.6e-57 2
WB|WBGene00000051 - symbol:acr-12 species:6239 "Caenorhab... 471 4.2e-57 2
UNIPROTKB|F1MUN1 - symbol:CHRNB2 "Uncharacterized protein... 587 4.6e-57 1
UNIPROTKB|P17787 - symbol:CHRNB2 "Neuronal acetylcholine ... 584 9.6e-57 1
RGD|2350 - symbol:Chrnb2 "cholinergic receptor, nicotinic... 584 9.6e-57 1
UNIPROTKB|P09484 - symbol:CHRNB2 "Neuronal acetylcholine ... 581 2.0e-56 1
UNIPROTKB|F1RKU7 - symbol:CHRNB4 "Uncharacterized protein... 567 6.1e-55 1
UNIPROTKB|Q8SPU6 - symbol:CHRNB4 "Neuronal acetylcholine ... 563 1.6e-54 1
UNIPROTKB|P30926 - symbol:CHRNB4 "Neuronal acetylcholine ... 562 2.1e-54 1
UNIPROTKB|F1MC93 - symbol:CHRNB4 "Neuronal acetylcholine ... 561 2.6e-54 1
RGD|621544 - symbol:Chrnb3 "cholinergic receptor, nicotin... 456 3.3e-53 2
UNIPROTKB|F8WFN5 - symbol:Chrnb3 "Neuronal acetylcholine ... 456 3.3e-53 2
RGD|69277 - symbol:Chrna1 "cholinergic receptor, nicotini... 474 5.4e-53 2
RGD|2347 - symbol:Chrna5 "cholinergic receptor, nicotinic... 439 1.1e-52 2
UNIPROTKB|G3V9X4 - symbol:Chrna5 "Neuronal acetylcholine ... 439 1.1e-52 2
UNIPROTKB|Q6PW50 - symbol:Chrna5 "Neuronal acetylcholine ... 439 1.1e-52 2
MGI|MGI:87885 - symbol:Chrna1 "cholinergic receptor, nico... 472 1.8e-52 2
MGI|MGI:106212 - symbol:Chrnb3 "cholinergic receptor, nic... 449 2.3e-52 2
WB|WBGene00000047 - symbol:acr-8 species:6239 "Caenorhabd... 430 3.7e-52 2
MGI|MGI:87892 - symbol:Chrnb4 "cholinergic receptor, nico... 540 4.4e-52 1
UNIPROTKB|E2RIZ9 - symbol:CHRNA1 "Uncharacterized protein... 470 4.8e-52 2
UNIPROTKB|F1P208 - symbol:CHRNA1 "Acetylcholine receptor ... 473 7.7e-52 2
UNIPROTKB|P09479 - symbol:CHRNA1 "Acetylcholine receptor ... 473 7.7e-52 2
UNIPROTKB|P02709 - symbol:CHRNA1 "Acetylcholine receptor ... 470 7.7e-52 2
UNIPROTKB|F1RZI3 - symbol:F1RZI3 "Uncharacterized protein... 469 7.7e-52 2
UNIPROTKB|I3L584 - symbol:I3L584 "Uncharacterized protein... 469 7.7e-52 2
UNIPROTKB|I3L8N6 - symbol:LOC100626974 "Uncharacterized p... 469 7.7e-52 2
UNIPROTKB|I3LDY9 - symbol:LOC100626974 "Uncharacterized p... 469 7.7e-52 2
UNIPROTKB|I3LUK2 - symbol:I3LUK2 "Uncharacterized protein... 469 7.7e-52 2
UNIPROTKB|F1PN73 - symbol:CHRNB3 "Uncharacterized protein... 446 7.7e-52 2
RGD|2351 - symbol:Chrnb4 "cholinergic receptor, nicotinic... 537 9.2e-52 1
UNIPROTKB|P12392 - symbol:Chrnb4 "Neuronal acetylcholine ... 537 9.2e-52 1
WARNING: Descriptions of 197 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015519 [details] [associations]
symbol:nAcRalpha-7E "nicotinic Acetylcholine Receptor alpha
7E" species:7227 "Drosophila melanogaster" [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0004889
eggNOG:NOG290206 GO:GO:0005892 OrthoDB:EOG4D2551 EMBL:Y15593
ProteinModelPortal:O18394 SMR:O18394 STRING:O18394 PaxDb:O18394
PRIDE:O18394 FlyBase:FBgn0015519 InParanoid:O18394
ArrayExpress:O18394 Bgee:O18394 Uniprot:O18394
Length = 795
Score = 761 (272.9 bits), Expect = 6.3e-104, Sum P(3) = 6.3e-104
Identities = 144/168 (85%), Positives = 156/168 (92%)
Query: 61 VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 120
VGVDLSEFY SVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVN+IIPCM
Sbjct: 194 VGVDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCM 253
Query: 121 GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI 180
GISFLT+L FYLPSDSGEKV+LSISIL+SL VFFLL+ EIIPPTSLVVPLLGK+++F MI
Sbjct: 254 GISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMI 313
Query: 181 LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLY 228
L + SICVTV+VLN+HFRSPQTH MAPWV+ VFI LPR LVMRRPLY
Sbjct: 314 LDTFSICVTVLVLNIHFRSPQTHTMAPWVRTVFINQLPRFLVMRRPLY 361
Score = 265 (98.3 bits), Expect = 6.3e-104, Sum P(3) = 6.3e-104
Identities = 53/91 (58%), Positives = 72/91 (79%)
Query: 286 CPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGG 345
CP +H++ V +IA+ TR +++ST+ VKEDWKYVA+VLDRLFLWIFT+AV+ G
Sbjct: 704 CPE-LHKAMDGVTYIADQTRKEEESTR------VKEDWKYVAMVLDRLFLWIFTIAVVVG 756
Query: 346 TAGIILQAPSLYDDRVPIDSKFAEIANSNSQ 376
TAGIILQAP+LYD R+PID K +EIA++ ++
Sbjct: 757 TAGIILQAPTLYDTRMPIDIKLSEIASTTAK 787
Score = 37 (18.1 bits), Expect = 6.3e-104, Sum P(3) = 6.3e-104
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 234 HLADGPLIGGSGGSCKIHGHVS 255
+L D +G GG+ I GH+S
Sbjct: 422 NLMDECGMGMGGGASTITGHLS 443
>FB|FBgn0000036 [details] [associations]
symbol:nAcRalpha-96Aa "nicotinic Acetylcholine Receptor alpha
96Aa" species:7227 "Drosophila melanogaster" [GO:0005887 "integral
to plasma membrane" evidence=NAS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 EMBL:AE014297 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:X07194 PIR:S00381
RefSeq:NP_524481.2 UniGene:Dm.2364 ProteinModelPortal:P09478
SMR:P09478 STRING:P09478 PRIDE:P09478 EnsemblMetazoa:FBtr0084619
GeneID:42918 KEGG:dme:Dmel_CG5610 CTD:42918 FlyBase:FBgn0000036
eggNOG:NOG290206 InParanoid:P09478 OMA:ACAGHVA OrthoDB:EOG44TMQ0
PhylomeDB:P09478 GenomeRNAi:42918 NextBio:831261 Bgee:P09478
GermOnline:CG5610 GO:GO:0005892 Uniprot:P09478
Length = 567
Score = 684 (245.8 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 122/166 (73%), Positives = 151/166 (90%)
Query: 61 VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 120
VG+DL ++Y+SVEWDI+ VPAVRNEKFY+CC+EPYLDI FN+T+RRKTLFYTVN+IIPC+
Sbjct: 193 VGIDLQDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCV 252
Query: 121 GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI 180
GISFL+VL FYLPSDSGEK++L ISIL+SL VFFLL+ EIIPPTSL VPLLGKYL+F M+
Sbjct: 253 GISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMM 312
Query: 181 LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
LV++S+ VT+ VLNV+FRSP TH+MAPWV+R+FIQ LP++L + RP
Sbjct: 313 LVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILPKLLCIERP 358
Score = 203 (76.5 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 298 RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
RFIA+H + +D ES V+EDWKYVA+VLDR+FLWIF +A + GTA IILQAPSLY
Sbjct: 485 RFIAQHVKNKDKF--ES----VEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLY 538
Query: 358 DDRVPIDSKFAEIA 371
D PID +++IA
Sbjct: 539 DQSQPIDILYSKIA 552
>FB|FBgn0037212 [details] [associations]
symbol:nAcRalpha-80B "nicotinic Acetylcholine Receptor alpha
80B" species:7227 "Drosophila melanogaster" [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711
GO:GO:0004889 FlyBase:FBgn0037212 EMBL:AJ272159
ProteinModelPortal:Q9NFR5 SMR:Q9NFR5 STRING:Q9NFR5 PRIDE:Q9NFR5
InParanoid:Q9NFR5 ArrayExpress:Q9NFR5 Bgee:Q9NFR5 Uniprot:Q9NFR5
Length = 568
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 180/243 (74%), Positives = 197/243 (81%)
Query: 61 VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 120
VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM
Sbjct: 209 VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 268
Query: 121 GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI 180
GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI
Sbjct: 269 GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI 328
Query: 181 LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPL 240
LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFI FLP L ++RP YN + S L L
Sbjct: 329 LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIDFLPAFLFIKRPTYNFETSKL----L 384
Query: 241 IGGSGGSCKIHGHVSLSNI---LTEAILSSSPQDD-SKHLR---PPAFS---HAQCPPVM 290
+ + +C + + S +NI ++ +S P++D S+ + P S H PP+
Sbjct: 385 LKDTH-AC-FYPYYSATNIDRLVSSGYNNSLPKEDLSQSITANGPFGGSCQVHGPVPPLT 442
Query: 291 HRS 293
H S
Sbjct: 443 HCS 445
Score = 395 (144.1 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 85/156 (54%), Positives = 111/156 (71%)
Query: 236 ADGPLIGGSGGSCKIHGHVS-LSNILTEAILSSSPQD------DSKHLRPPAFSHAQCPP 288
A+GP GGSC++HG V L++ ++ I + D S L PAFSH++C P
Sbjct: 424 ANGPF----GGSCQVHGPVPPLTHCSSDEIAAVPDMDIGPLGMKSPILNNPAFSHSKCLP 479
Query: 289 VMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAG 348
+H+SCFCVRFIAEHT+MQ+DSTK VKEDWKYVA+VLDRLFLWIFTLAV+ GTAG
Sbjct: 480 KIHKSCFCVRFIAEHTKMQEDSTK------VKEDWKYVAMVLDRLFLWIFTLAVVVGTAG 533
Query: 349 IILQAPSLYDDRVPI-DSKFAEIANSNSQFKCPPPK 383
IILQAP+LYDDR+PI + K + + +++ +C PP+
Sbjct: 534 IILQAPTLYDDRIPIIEQKDLDFSGTSAG-RCRPPQ 568
Score = 37 (18.1 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 11 KDEHHHHPESFYPYHTAARSTEDLSRFKRESSRKNKDDLS 50
KD H FYPY++A +S S K +DLS
Sbjct: 386 KDTH----ACFYPYYSATNIDRLVSSGYNNSLPK--EDLS 419
>FB|FBgn0004118 [details] [associations]
symbol:nAcRbeta-96A "nicotinic Acetylcholine Receptor beta
96A" species:7227 "Drosophila melanogaster" [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014297 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 eggNOG:NOG290206 GO:GO:0005892
EMBL:X55676 EMBL:Y14678 EMBL:AY089498 PIR:S12899 RefSeq:NP_524483.1
RefSeq:NP_733002.1 UniGene:Dm.4978 ProteinModelPortal:P25162
SMR:P25162 PaxDb:P25162 EnsemblMetazoa:FBtr0084681 GeneID:42920
KEGG:dme:Dmel_CG6798 CTD:42920 FlyBase:FBgn0004118
InParanoid:P25162 OMA:AYDNGMQ OrthoDB:EOG480GBW PhylomeDB:P25162
GenomeRNAi:42920 NextBio:831273 Bgee:P25162 GermOnline:CG6798
Uniprot:P25162
Length = 519
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 171/327 (52%), Positives = 230/327 (70%)
Query: 60 RVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPC 119
+VG+DL+EFY+SVEWDILEVPA +NE++Y EP+ DITF +TMRRKTLFYTVN+I+PC
Sbjct: 197 QVGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPC 256
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
+ ++FLTVL FYLPSDSGEKVTL ISIL+SL VFFLL+ EIIPPTSL VPLLGKYL+F M
Sbjct: 257 VALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTM 316
Query: 180 ILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN-PDGSHLADG 238
ILVS+S+ TV VLN+HFRSP TH M+P V+++F+ F+P++++MRR Y PD
Sbjct: 317 ILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRRTQYTLPDYDDST-- 374
Query: 239 PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCP----PVMHRSC 294
P +G + +I S+S+ +E S D+ ++ S P P + ++
Sbjct: 375 P---SNGYTNEIDVRDSISDFPSEFKDSQDGAYDNG-MQNSVDSDNVIPRNLTPEVLQAL 430
Query: 295 FCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAP 354
VRFIA+H + D+ K++ ++ EDWK+V++VLDR FLW+FTL+ + GT II Q+P
Sbjct: 431 RAVRFIAQHIK---DADKDNEIV---EDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQSP 484
Query: 355 SLYDDRVPIDSKFAEIANSNSQFKCPP 381
SLYD R PID + +EI + F PP
Sbjct: 485 SLYDTRSPIDRQLSEIPLRKNNFMLPP 511
>FB|FBgn0000039 [details] [associations]
symbol:nAcRalpha-96Ab "nicotinic Acetylcholine Receptor alpha
96Ab" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014297 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 KO:K05312 eggNOG:NOG290206
GO:GO:0005892 EMBL:X52274 EMBL:X53583 EMBL:AY058446 PIR:S11679
RefSeq:NP_524482.1 RefSeq:NP_733001.1 UniGene:Dm.2363
ProteinModelPortal:P17644 SMR:P17644 DIP:DIP-22674N IntAct:P17644
MINT:MINT-888559 STRING:P17644 PRIDE:P17644
EnsemblMetazoa:FBtr0084639 EnsemblMetazoa:FBtr0084640 GeneID:42919
KEGG:dme:Dmel_CG6844 CTD:42919 FlyBase:FBgn0000039
InParanoid:P17644 OMA:HISQKND OrthoDB:EOG4W6MB5 PhylomeDB:P17644
GenomeRNAi:42919 NextBio:831266 Bgee:P17644 GermOnline:CG6844
Uniprot:P17644
Length = 576
Score = 620 (223.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 109/178 (61%), Positives = 144/178 (80%)
Query: 49 LSPRRPPHRRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKT 108
+S + + +G+DL E+Y SVEWDIL VPA R+EK+Y CC EPY DI FNIT+RRKT
Sbjct: 202 ISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKT 261
Query: 109 LFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVV 168
LFYTVN+IIPC+GIS+L+VL FYLP+DSGEK+ L ISIL+S +FFLL+ EIIP TSL +
Sbjct: 262 LFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLAL 321
Query: 169 PLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
PLLGKYL+F M+LV +S+ +T+++LN+H+R P THKM PW++ FI+ LP++L+MR P
Sbjct: 322 PLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVP 379
Score = 171 (65.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 48/133 (36%), Positives = 72/133 (54%)
Query: 240 LIGGSGGSCK-IHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR 298
L+G GG + G+ L ++L S DDS L A + + P + ++ V
Sbjct: 449 LVGALGGGLSTLSGYNGLPSVL-------SGLDDS--LSDVA-ARKKYPFELEKAIHNVM 498
Query: 299 FIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYD 358
FI H + QD+ E +DW +VA+V+DRLFLW+F +A L GT I+ +APSLYD
Sbjct: 499 FIQHHMQRQDEFNAED------QDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSLYD 552
Query: 359 DRVPIDSKFAEIA 371
D ID + +++A
Sbjct: 553 DTKAIDVQLSDVA 565
>WB|WBGene00006797 [details] [associations]
symbol:unc-63 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0006581 "acetylcholine catabolic
process" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=ISS;IMP] [GO:0022848
"acetylcholine-gated cation channel activity" evidence=IMP]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711
GO:GO:0031594 GO:GO:0040011 GO:GO:0007271 GO:GO:0009791
GO:GO:0040012 GO:GO:0006581 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 eggNOG:NOG290206
GO:GO:0015464 GO:GO:0046662 EMBL:AF288374 EMBL:FO080728
RefSeq:NP_491533.2 UniGene:Cel.19329 ProteinModelPortal:Q9N587
SMR:Q9N587 DIP:DIP-42343N MINT:MINT-3383641 STRING:Q9N587
EnsemblMetazoa:Y110A7A.3 GeneID:172150 KEGG:cel:CELE_Y110A7A.3
UCSC:Y110A7A.3 CTD:172150 WormBase:Y110A7A.3 InParanoid:Q9N587
OMA:HTGKVRW DrugBank:DB00848 NextBio:874233 GO:GO:0022848
Uniprot:Q9N587
Length = 502
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 154/302 (50%), Positives = 203/302 (67%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 121
G+DLS++Y SVEWDIL VP R+ K Y CC+ P++DIT+ I +RRKTLFYTVN+I P +G
Sbjct: 213 GIDLSDYYPSVEWDILNVPGKRHSKRYPCCESPFIDITYEIHLRRKTLFYTVNLIFPSVG 272
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMIL 181
ISFLT L FYLPSD GEK++L ISILISL VFFLL+VEIIP TSLV+PL+GKYL+F M+L
Sbjct: 273 ISFLTALVFYLPSDGGEKISLCISILISLTVFFLLLVEIIPSTSLVIPLIGKYLLFTMVL 332
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLI 241
V++S+ VTVV LNVH+RSP TH M W+KR+F+ FLP+ L+M RP P G H
Sbjct: 333 VTLSVVVTVVTLNVHYRSPTTHTMPKWMKRLFVDFLPKYLLMTRP--QPPGHHSKPNRKF 390
Query: 242 GGSGGSCKIH-GHV--SLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF-CV 297
+ I HV S +L+ + +S +++S P S PV RS V
Sbjct: 391 DSRASTFSIGVNHVLGQNSELLSPGL--NSNREESSFTLPRDNS-----PV--RSAVESV 441
Query: 298 RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
+IA+H + ++D + V EDWKY+++V+DR+FL FT A GT II +APS+Y
Sbjct: 442 AYIADHLKNEEDDKQ------VIEDWKYISVVMDRIFLITFTFACAFGTVVIIARAPSIY 495
Query: 358 DD 359
D+
Sbjct: 496 DN 497
>WB|WBGene00006774 [details] [associations]
symbol:unc-38 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA;IDA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0040011 "locomotion" evidence=IMP] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274
GO:GO:0043005 GO:GO:0040011 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312
GO:GO:0015464 GO:GO:0046662 EMBL:X98599 EMBL:X98600 EMBL:FO081197
PIR:T25720 PIR:T43634 RefSeq:NP_491472.1 UniGene:Cel.19675
ProteinModelPortal:Q23022 SMR:Q23022 MINT:MINT-3383663
STRING:Q23022 TCDB:1.A.9.1.2 EnsemblMetazoa:F21F3.5 GeneID:172105
KEGG:cel:CELE_F21F3.5 UCSC:F21F3.5 CTD:172105 WormBase:F21F3.5
InParanoid:Q23022 OMA:ENICFIA NextBio:874031 Uniprot:Q23022
Length = 511
Score = 568 (205.0 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 119/254 (46%), Positives = 174/254 (68%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFY-TCCDEP-YLDITFNITMRRKTLFYTVNIIIPC 119
G+DLS++Y SVEWDI+ A R K Y +CC + Y+D+T+ + +RRK LFYTVN++ PC
Sbjct: 209 GIDLSDYYPSVEWDIMSRVAKRRAKNYPSCCPQSAYIDVTYYLQLRRKPLFYTVNLVFPC 268
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
+GISFLT+L FYLPSDSGEKVTL ISIL++L +FFLL+ EIIP TS+ +PL+GKYL+F M
Sbjct: 269 VGISFLTILVFYLPSDSGEKVTLCISILVALTIFFLLLTEIIPATSITLPLIGKYLLFTM 328
Query: 180 ILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGP 239
++V++S+ VTV+ LN+HFR+P TH M WVK+VF+++LP++L MRRP+ D D
Sbjct: 329 VMVTLSVVVTVISLNLHFRTPTTHLMPNWVKKVFLKWLPKLLFMRRPI--DDYEEKFDDK 386
Query: 240 LIGGSGG-SCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR 298
G + +H H +SN+ + ++ DD+ ++ +S PPV+ ++ +
Sbjct: 387 KKPKDGKIALSVHAH-RVSNVGNN--IRNATIDDT--IQKMYYS----PPVV-KAFENIC 436
Query: 299 FIAEHTRMQDDSTK 312
FIAE + +D K
Sbjct: 437 FIAELLKKKDRDDK 450
Score = 169 (64.5 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 287 PPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
PPV+ ++ + FIAE + +D K + EDWKYVA+VLDRLFL IF++A GT
Sbjct: 426 PPVV-KAFENICFIAELLKKKDRDDK------IDEDWKYVAMVLDRLFLLIFSIACFVGT 478
Query: 347 AGIILQAPSLYDDRVPIDSKF 367
I+L+AP+LYD R PID ++
Sbjct: 479 VIILLRAPTLYDTRQPIDLQY 499
>UNIPROTKB|P18845 [details] [associations]
symbol:chrna3 "Neuronal acetylcholine receptor subunit
alpha-3" species:7957 "Carassius auratus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0035095
"behavioral response to nicotine" evidence=ISS] [GO:0060084
"synaptic transmission involved in micturition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007399
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GO:GO:0060084 EMBL:X54051 PIR:S11230
ProteinModelPortal:P18845 SMR:P18845 Uniprot:P18845
Length = 512
Score = 550 (198.7 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 106/229 (46%), Positives = 152/229 (66%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
V+L +F+ S EW+I++ P +++ Y CC+E Y DIT++ +RR LFYT+N+IIPC+ I
Sbjct: 188 VNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLI 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT+L FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 248 SFLTILVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 307
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI +TV VLNVH+R+P TH M WV+ VF++ LPR+++MRRP+ + S G + G
Sbjct: 308 TLSIVITVFVLNVHYRTPMTHTMPSWVRTVFLRALPRVMLMRRPIDLSESSGKGGGEIAG 367
Query: 243 --GSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPV 289
G+GG G S+ + ++S + K C P+
Sbjct: 368 SSGTGGGRGAEGKKMKSSASQQGAMNSLEFGEGKAALEGKKGGCPCHPI 416
Score = 137 (53.3 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 273 SKHLRPPAFS----HAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVAL 328
S+ L P A + + P + ++ V++IAE+ R ++ + KE V++DWKYVA+
Sbjct: 428 SRQLTPQAINTVVTFSVVSPEIKQAIESVKYIAENMRSRNKA-KE-----VEDDWKYVAM 481
Query: 329 VLDRLFLWIFTLAVLGGTAGIILQ 352
V+DR+FLW+F L + GT G+ LQ
Sbjct: 482 VIDRIFLWVFVLVCVLGTLGLFLQ 505
>ZFIN|ZDB-GENE-070822-1 [details] [associations]
symbol:chrna3 "cholinergic receptor, nicotinic, alpha
3" species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-070822-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:CU640433 IPI:IPI00627307
ProteinModelPortal:F8W5I4 Ensembl:ENSDART00000149976 Uniprot:F8W5I4
Length = 506
Score = 527 (190.6 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 94/164 (57%), Positives = 129/164 (78%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +F+ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 188 INLKDFWESGEWTIIDAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINMIIPCLLI 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 248 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 307
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH+R+P+TH M WV+RVF+ LPR++ M RP
Sbjct: 308 TLSIVITVFVLNVHYRTPKTHTMPCWVRRVFLSLLPRVMFMTRP 351
Score = 160 (61.4 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 42/105 (40%), Positives = 63/105 (60%)
Query: 256 LSNILTE-AILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
+SN+ +E A SP S+ L A P V + V++IAE+ R+Q+++ KE
Sbjct: 408 ISNMTSEGAEDGGSPCSSSESLDGFLCMSAVSPQV-REAIESVKYIAENMRLQNEA-KE- 464
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDD 359
V++DWKYVA+V+DR+FLW+F L + GTAG+ LQ L +D
Sbjct: 465 ----VQDDWKYVAMVIDRIFLWVFVLVCILGTAGLFLQPLLLGED 505
>ZFIN|ZDB-GENE-090312-91 [details] [associations]
symbol:chrna6 "cholinergic receptor, nicotinic,
alpha 6" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-090312-91 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 OrthoDB:EOG45B1FG CTD:8973 KO:K04808 EMBL:BC171403
EMBL:BC171405 EMBL:DQ822507 IPI:IPI00505006 RefSeq:NP_001036149.1
UniGene:Dr.72302 SMR:Q0PJT9 GeneID:555747 KEGG:dre:555747
InParanoid:Q0PJT9 NextBio:20881142 Uniprot:Q0PJT9
Length = 512
Score = 540 (195.1 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 103/185 (55%), Positives = 138/185 (74%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
V+L +F+ S EW+I++ P +++ Y CC+E Y DIT++ +RR LFYT+N+IIPC+ I
Sbjct: 188 VNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLI 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 248 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 307
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI +TV VLNVH+R+P TH M WV VF++ LPRI++MRRPL + S G G
Sbjct: 308 TLSIVITVFVLNVHYRTPMTHTMPSWVHTVFLRALPRIMLMRRPLDLSESSGKG-GLETG 366
Query: 243 GSGGS 247
GS G+
Sbjct: 367 GSSGT 371
Score = 137 (53.3 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 273 SKHLRPPAFS----HAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVAL 328
S+ L P A + + P + ++ V++IAE+ R ++ + KE V++DWKYVA+
Sbjct: 428 SRQLSPQAINTVVAFSVVSPEIKQAIESVKYIAENMRSRNKA-KE-----VEDDWKYVAM 481
Query: 329 VLDRLFLWIFTLAVLGGTAGIILQ 352
V+DR+FLW+F L + GT G+ LQ
Sbjct: 482 VIDRIFLWVFVLVCVLGTLGLFLQ 505
>UNIPROTKB|E2RC61 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0014059 "regulation of dopamine secretion"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GO:GO:0005892 GeneTree:ENSGT00620000087732 GO:GO:0051899 CTD:8973
KO:K04808 EMBL:AAEX03010368 RefSeq:XP_539951.2
ProteinModelPortal:E2RC61 Ensembl:ENSCAFT00000008765 GeneID:482836
KEGG:cfa:482836 OMA:MRNQNET NextBio:20857349 Uniprot:E2RC61
Length = 494
Score = 535 (193.4 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 96/165 (58%), Positives = 131/165 (79%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
++SI VTV VLN+H+R+P TH M WVK VF+Q LP+IL+MRRPL
Sbjct: 315 TLSIAVTVFVLNIHYRTPATHTMPKWVKTVFLQLLPQILMMRRPL 359
Score = 142 (55.0 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + Q++ TKE V++DWKYVA+V+DR+FLW+F + GTAG+ LQ
Sbjct: 436 VQFIAENMKNQNE-TKE-----VEDDWKYVAMVVDRVFLWVFIFVCVFGTAGLFLQ 485
>UNIPROTKB|F1PNA0 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03010368
Ensembl:ENSCAFT00000008776 Uniprot:F1PNA0
Length = 395
Score = 535 (193.4 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 96/165 (58%), Positives = 131/165 (79%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 96 VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 155
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 156 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 215
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
++SI VTV VLN+H+R+P TH M WVK VF+Q LP+IL+MRRPL
Sbjct: 216 TLSIAVTVFVLNIHYRTPATHTMPKWVKTVFLQLLPQILMMRRPL 260
Score = 142 (55.0 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + Q++ TKE V++DWKYVA+V+DR+FLW+F + GTAG+ LQ
Sbjct: 337 VQFIAENMKNQNE-TKE-----VEDDWKYVAMVVDRVFLWVFIFVCVFGTAGLFLQ 386
>UNIPROTKB|F1P8T5 [details] [associations]
symbol:CHRNA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03008991
Ensembl:ENSCAFT00000002688 Uniprot:F1P8T5
Length = 625
Score = 516 (186.7 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 94/170 (55%), Positives = 129/170 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 195 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDG 232
++SI +TV VLNVH+R+P TH M WVK +F+ LPR++ M RP DG
Sbjct: 315 TLSIVITVFVLNVHYRTPTTHTMPTWVKTIFLHLLPRVMFMTRPA-GSDG 363
Score = 131 (51.2 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDD 359
++ +++DWKYVA+V+DR+FLW+F L + GTAG+ LQ DD
Sbjct: 581 SVFQIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLLARDD 625
Score = 38 (18.4 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 269 PQDDSKHLRPP 279
P ++HLRPP
Sbjct: 419 PPGPARHLRPP 429
>UNIPROTKB|F1MQ06 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0014059 "regulation of dopamine secretion" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GO:GO:0005892 GeneTree:ENSGT00620000087732 GO:GO:0051899
OMA:MRNQNET EMBL:DAAA02060957 IPI:IPI00704411
ProteinModelPortal:F1MQ06 Ensembl:ENSBTAT00000018679 Uniprot:F1MQ06
Length = 494
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 137/300 (45%), Positives = 197/300 (65%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD++EF+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL--YNPDGSHLADGPL 240
++SI VTV VLN+H+R+P TH M WVK VF++ LP++L+M+RPL G+H P
Sbjct: 315 TLSIVVTVFVLNIHYRTPTTHSMPTWVKAVFLRLLPQMLMMKRPLDKMKETGAHR--NPK 372
Query: 241 IGGSGGSCKIH-GHVSLSNILTEAI---LSSSPQDDSKHL--RPPAF--SHAQCPPVMHR 292
G S K+ H +L E S P + L +P + +++ P +
Sbjct: 373 -GVSSRPAKVKFEHHKEPRLLKECCHCHRSGEPATSKRRLSHQPLQWMAENSELSPEVED 431
Query: 293 SCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V FIAE+ + Q++ TKE V++DWKYVA+V+DR+FLW+F + + GTAG+ LQ
Sbjct: 432 VIDSVHFIAENMKTQNE-TKE-----VEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>UNIPROTKB|F1M4L2 [details] [associations]
symbol:Chrna3 "Neuronal acetylcholine receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2345 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 IPI:IPI00949759
ProteinModelPortal:F1M4L2 Ensembl:ENSRNOT00000065356
ArrayExpress:F1M4L2 Uniprot:F1M4L2
Length = 428
Score = 520 (188.1 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 94/164 (57%), Positives = 127/164 (77%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P ++E Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 178 MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLI 237
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 238 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 297
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH+R+P TH M WVK VF+ LPR++ M RP
Sbjct: 298 TLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP 341
Score = 144 (55.7 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 38/105 (36%), Positives = 58/105 (55%)
Query: 258 NILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHR---SCFCVRFIAEHTRMQDDSTKES 314
N+L + + P S P A A P M + + V++IAE+ + Q+ + KE
Sbjct: 330 NLLPRVMFMTRPTSASAVQTPKAARKAT-PAKMGQIKEAIQSVKYIAENMKAQNVA-KE- 386
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDD 359
+++DWKYVA+V+DR+FLW+F L + GTAG+ LQ DD
Sbjct: 387 ----IQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMARDD 427
>UNIPROTKB|Q19AE6 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9669 "Mustela putorius furo" [GO:0001666 "response
to hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] [GO:0035095 "behavioral response to nicotine"
evidence=ISS] [GO:0050877 "neurological system process"
evidence=ISS] [GO:0050890 "cognition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979
GO:GO:0009897 GO:GO:0014059 GO:GO:0019233 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890
GO:GO:0006281 GO:GO:0001666 GO:GO:0007626 GO:GO:0060080
GO:GO:0007271 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GO:GO:0001508 GO:GO:0042113 GO:GO:0006816
GO:GO:0051899 EMBL:DQ533688 ProteinModelPortal:Q19AE6 SMR:Q19AE6
Uniprot:Q19AE6
Length = 627
Score = 501 (181.4 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 94/164 (57%), Positives = 122/164 (74%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD + S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+I+PC+ I
Sbjct: 200 VDQLGLWESGEWVIVDAAGTYNTRKYECCAEVYPDITYAFVIRRLPLFYTINLIVPCLLI 259
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEKVTL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F M+ V
Sbjct: 260 SCLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMVFV 319
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L+M+RP
Sbjct: 320 TLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDVVPRLLLMKRP 363
Score = 159 (61.0 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 277 RPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLW 336
R PA H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW
Sbjct: 552 RVPA-RHLPLSPALARAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLW 604
Query: 337 IFTLAVLGGTAGIIL 351
+F + L GTAG+ L
Sbjct: 605 VFVIVCLLGTAGLFL 619
>UNIPROTKB|F1NWY0 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AADN02040457 IPI:IPI00681014
Ensembl:ENSGALT00000034654 Uniprot:F1NWY0
Length = 406
Score = 515 (186.3 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 92/164 (56%), Positives = 128/164 (78%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 162 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINMIIPCLLI 221
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 222 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 281
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH+R+P+TH M WV+ +F+ LPRI+ M RP
Sbjct: 282 TLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRP 325
Score = 143 (55.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 27/55 (49%), Positives = 43/55 (78%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
V++IAE+ +MQ+++ KE +++DWKYVA+V+DR+FLW+F L + GTAG+ L
Sbjct: 358 VKYIAENMKMQNEA-KE-----IQDDWKYVAMVIDRIFLWVFILVCILGTAGLFL 406
>UNIPROTKB|P43681 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IDA;TAS] [GO:0015276 "ligand-gated ion channel activity"
evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0006811 "ion transport" evidence=NAS] [GO:0007165
"signal transduction" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0035094 "response to nicotine"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0050877 "neurological system process" evidence=IMP] [GO:0030425
"dendrite" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006979
"response to oxidative stress" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=NAS;TAS] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0001508 "regulation of action potential"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS;TAS] [GO:0006816 "calcium ion
transport" evidence=ISS] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISS] [GO:0009897 "external side of plasma
membrane" evidence=ISS] [GO:0014059 "regulation of dopamine
secretion" evidence=ISS] [GO:0019233 "sensory perception of pain"
evidence=ISS] [GO:0042113 "B cell activation" evidence=ISS]
[GO:0042391 "regulation of membrane potential" evidence=ISS]
[GO:0051899 "membrane depolarization" evidence=ISS] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISS] [GO:0042166 "acetylcholine binding" evidence=IC]
[GO:0035095 "behavioral response to nicotine" evidence=IMP]
[GO:0050890 "cognition" evidence=IMP] Reactome:REACT_13685
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979
GO:GO:0009897 GO:GO:0014059 GO:GO:0019233 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025
GO:GO:0050890 GO:GO:0030425 GO:GO:0006281 GO:GO:0001666
GO:GO:0007626 GO:GO:0060080 GO:GO:0007271 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
DrugBank:DB00184 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
GO:GO:0001508 Orphanet:98784 OrthoDB:EOG480HWN CTD:1137 KO:K04806
GO:GO:0042113 GO:GO:0006816 GO:GO:0051899 EMBL:L35901 EMBL:X89741
EMBL:X89742 EMBL:X89743 EMBL:X89744 EMBL:X89745 EMBL:X89746
EMBL:U62433 EMBL:Y08421 EMBL:DQ093071 EMBL:AL121827 EMBL:BC096290
EMBL:X87629 IPI:IPI00020036 PIR:JC4021 RefSeq:NP_000735.1
RefSeq:NP_001243502.1 UniGene:Hs.10734 PDB:2GVT PDB:2LLY
PDBsum:2GVT PDBsum:2LLY ProteinModelPortal:P43681 SMR:P43681
STRING:P43681 PhosphoSite:P43681 DMDM:1351848 PaxDb:P43681
PRIDE:P43681 Ensembl:ENST00000370263 GeneID:1137 KEGG:hsa:1137
UCSC:uc002yes.2 GeneCards:GC20M061974 HGNC:HGNC:1958 HPA:CAB034064
MIM:118504 MIM:600513 neXtProt:NX_P43681 PharmGKB:PA26490
InParanoid:P43681 OMA:VQHMSSP PhylomeDB:P43681 BindingDB:P43681
ChEMBL:CHEMBL1882 DrugBank:DB01273 GenomeRNAi:1137 NextBio:4730
ArrayExpress:P43681 Bgee:P43681 CleanEx:HS_CHRNA4
Genevestigator:P43681 GermOnline:ENSG00000101204 Uniprot:P43681
Length = 627
Score = 507 (183.5 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 95/164 (57%), Positives = 124/164 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 198 VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFVIRRLPLFYTINLIIPCLLI 257
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 258 SCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 317
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L+M+RP
Sbjct: 318 TLSIVITVFVLNVHHRSPRTHTMPTWVRRVFLDIVPRLLLMKRP 361
Score = 150 (57.9 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 554 PPP--HLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWM 605
Query: 338 FTLAVLGGTAGIIL 351
F + L GT G+ L
Sbjct: 606 FIIVCLLGTVGLFL 619
>UNIPROTKB|Q5IS77 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9598 "Pan troglodytes" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] [GO:0035095 "behavioral response to nicotine"
evidence=ISS] [GO:0050877 "neurological system process"
evidence=ISS] [GO:0050890 "cognition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0050890 GO:GO:0006281 GO:GO:0001666
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1137 KO:K04806
EMBL:AY665251 RefSeq:NP_001029286.1 UniGene:Ptr.6176
ProteinModelPortal:Q5IS77 SMR:Q5IS77 GeneID:469999 KEGG:ptr:469999
NextBio:20847316 Uniprot:Q5IS77
Length = 627
Score = 507 (183.5 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 95/164 (57%), Positives = 124/164 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 198 VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFVIRRLPLFYTINLIIPCLLI 257
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 258 SCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 317
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L+M+RP
Sbjct: 318 TLSIVITVFVLNVHHRSPRTHTMPTWVRRVFLDIVPRLLLMKRP 361
Score = 150 (57.9 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 554 PPR--HLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWM 605
Query: 338 FTLAVLGGTAGIIL 351
F + L GT G+ L
Sbjct: 606 FIIVCLLGTVGLFL 619
>UNIPROTKB|F1LQT8 [details] [associations]
symbol:Chrna4 "Neuronal acetylcholine receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2346 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 IPI:IPI00947675
Ensembl:ENSRNOT00000067051 ArrayExpress:F1LQT8 Uniprot:F1LQT8
Length = 629
Score = 505 (182.8 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 96/164 (58%), Positives = 123/164 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 200 VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFIIRRLPLFYTINLIIPCLLI 259
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEKVTL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 260 SCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 319
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 320 TLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRP 363
Score = 151 (58.2 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 557 PP--QHLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWM 608
Query: 338 FTLAVLGGTAGIIL 351
F + L GT G+ L
Sbjct: 609 FIIVCLLGTVGLFL 622
Score = 41 (19.5 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 361 VPIDSKFAEIANSN---SQFKCPPPK 383
VP D K +E+ ++ S CPPPK
Sbjct: 432 VP-DLKTSEVEKASPCPSPGSCPPPK 456
>MGI|MGI:87888 [details] [associations]
symbol:Chrna4 "cholinergic receptor, nicotinic, alpha
polypeptide 4" species:10090 "Mus musculus" [GO:0001508 "regulation
of action potential" evidence=IMP] [GO:0001666 "response to
hypoxia" evidence=ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IGI;IMP;TAS]
[GO:0005216 "ion channel activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISO;IDA;IPI] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IMP;TAS] [GO:0006816 "calcium ion transport" evidence=IGI]
[GO:0006979 "response to oxidative stress" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007271
"synaptic transmission, cholinergic" evidence=ISO;IDA;IMP]
[GO:0007585 "respiratory gaseous exchange" evidence=IMP]
[GO:0007626 "locomotory behavior" evidence=IMP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0014059 "regulation of dopamine
secretion" evidence=IMP] [GO:0015464 "acetylcholine receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=IMP;TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034220 "ion transmembrane transport" evidence=IGI;IMP;IDA;TAS]
[GO:0035094 "response to nicotine" evidence=ISO;IGI;IMP]
[GO:0035095 "behavioral response to nicotine" evidence=ISO;IMP]
[GO:0035640 "exploration behavior" evidence=IMP] [GO:0042113 "B
cell activation" evidence=IMP] [GO:0042166 "acetylcholine binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=IGI] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050877 "neurological system process"
evidence=ISO;IMP] [GO:0050890 "cognition" evidence=ISO] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0051899 "membrane
depolarization" evidence=IGI;IMP] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IMP]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87888
GO:GO:0006979 GO:GO:0009897 GO:GO:0014059 GO:GO:0019233
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0050890 GO:GO:0030425
GO:GO:0006281 GO:GO:0001666 GO:GO:0007626 GO:GO:0060080
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
GO:GO:0001508 OrthoDB:EOG480HWN CTD:1137 KO:K04806 GO:GO:0042113
GO:GO:0006816 GO:GO:0051899 EMBL:AF225912 EMBL:AK034228
EMBL:AK083157 EMBL:BC053013 EMBL:AB010002 EMBL:AF325347
IPI:IPI00115712 RefSeq:NP_056545.3 UniGene:Mm.252369
ProteinModelPortal:O70174 SMR:O70174 DIP:DIP-48731N STRING:O70174
PhosphoSite:O70174 PaxDb:O70174 PRIDE:O70174
Ensembl:ENSMUST00000067120 GeneID:11438 KEGG:mmu:11438
BindingDB:O70174 ChEMBL:CHEMBL4457 ChiTaRS:CHRNA4 NextBio:278736
Bgee:O70174 Genevestigator:O70174 GermOnline:ENSMUSG00000027577
GO:GO:0007585 Uniprot:O70174
Length = 629
Score = 505 (182.8 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 96/164 (58%), Positives = 123/164 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 200 VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFIIRRLPLFYTINLIIPCLLI 259
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEKVTL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 260 SCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 319
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 320 TLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRP 363
Score = 151 (58.2 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 556 PP--QHLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWM 607
Query: 338 FTLAVLGGTAGIIL 351
F + L GT G+ L
Sbjct: 608 FIIVCLLGTVGLFL 621
>RGD|2345 [details] [associations]
symbol:Chrna3 "cholinergic receptor, nicotinic, alpha 3 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IMP] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISO;IDA;TAS] [GO:0006812 "cation transport" evidence=ISO]
[GO:0006937 "regulation of muscle contraction" evidence=ISO]
[GO:0006940 "regulation of smooth muscle contraction" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007171
"activation of transmembrane receptor protein tyrosine kinase
activity" evidence=ISO] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007507 "heart development" evidence=IEP]
[GO:0007626 "locomotory behavior" evidence=ISO] [GO:0008144 "drug
binding" evidence=IDA] [GO:0010035 "response to inorganic substance"
evidence=IEP] [GO:0014056 "regulation of acetylcholine secretion"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015464 "acetylcholine receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035094 "response to
nicotine" evidence=IEP] [GO:0035095 "behavioral response to nicotine"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=IDA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISO] [GO:0060084 "synaptic transmission
involved in micturition" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2345 GO:GO:0014069 GO:GO:0007507
GO:GO:0042493 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0015464 GO:GO:0060084 GO:GO:0007171 GO:GO:0014056 GO:GO:0006940
GO:GO:0010035 EMBL:X03440 EMBL:L31621 EMBL:U04961 IPI:IPI00198781
PIR:A24572 PIR:A53733 UniGene:Rn.10996 PDB:1OLF PDB:1OLJ PDBsum:1OLF
PDBsum:1OLJ ProteinModelPortal:P04757 SMR:P04757 STRING:P04757
PhosphoSite:P04757 PRIDE:P04757 UCSC:RGD:2345 InParanoid:P04757
OrthoDB:EOG45B1FG BindingDB:P04757 ChEMBL:CHEMBL3818
ArrayExpress:P04757 Genevestigator:P04757
GermOnline:ENSRNOG00000013829 GO:GO:0035094 Uniprot:P04757
Length = 499
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 143/321 (44%), Positives = 199/321 (61%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P ++E Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 190 MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLI 249
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 250 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 309
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP------------LYNP 230
++SI +TV VLNVH+R+P TH M WVK VF+ LPR++ M RP Y
Sbjct: 310 TLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSGEGDTPKTRTFYGA 369
Query: 231 DGSHL-----ADG-------PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRP 278
+ S+L AD P G+ G C H V +SN SSS + + L
Sbjct: 370 ELSNLNCFSRADSKSCKEGYPCQDGTCGYCH-HRRVKISNFSANLTRSSSSESVNAVLSL 428
Query: 279 PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF 338
A S P + + V++IAE+ + Q+ + KE +++DWKYVA+V+DR+FLW+F
Sbjct: 429 SALS-----PEIKEAIQSVKYIAENMKAQNVA-KE-----IQDDWKYVAMVIDRIFLWVF 477
Query: 339 TLAVLGGTAGIILQAPSLYDD 359
L + GTAG+ LQ DD
Sbjct: 478 ILVCILGTAGLFLQPLMARDD 498
>UNIPROTKB|E1BHK0 [details] [associations]
symbol:CHRNA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0042113 "B
cell activation" evidence=IEA] [GO:0035095 "behavioral response to
nicotine" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0014059 "regulation of dopamine secretion"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0001508 "regulation of action potential"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0006979 GO:GO:0009897 GO:GO:0014059
GO:GO:0019233 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890 GO:GO:0006281
GO:GO:0001666 GO:GO:0007626 GO:GO:0060080 GO:GO:0007271
GO:GO:0004889 GO:GO:0005892 GO:GO:0015464 GO:GO:0001508
GeneTree:ENSGT00620000087732 CTD:1137 KO:K04806 OMA:EDGVRCR
GO:GO:0042113 GO:GO:0006816 GO:GO:0051899 EMBL:DAAA02036229
IPI:IPI00710678 RefSeq:NP_001179829.1 UniGene:Bt.35525
Ensembl:ENSBTAT00000022855 GeneID:537251 KEGG:bta:537251
NextBio:20877096 Uniprot:E1BHK0
Length = 614
Score = 505 (182.8 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 95/164 (57%), Positives = 123/164 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 198 VDQLDFWDSGEWVIVDAVGTYNTRKYECCAEVYSDITYAFIIRRLPLFYTINLIIPCLLI 257
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 258 SCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 317
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 318 TLSIIITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRP 361
Score = 150 (57.9 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 288 PVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTA 347
P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+F + L GTA
Sbjct: 549 PALARAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWVFIIVCLLGTA 602
Query: 348 GIIL 351
G+ L
Sbjct: 603 GLFL 606
>RGD|2346 [details] [associations]
symbol:Chrna4 "cholinergic receptor, nicotinic, alpha 4 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA;IC;ISO;IDA] [GO:0005216 "ion channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA;TAS]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0006979 "response to oxidative stress" evidence=ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007271 "synaptic
transmission, cholinergic" evidence=ISO;IMP] [GO:0007585 "respiratory
gaseous exchange" evidence=ISO] [GO:0007626 "locomotory behavior"
evidence=ISO] [GO:0008144 "drug binding" evidence=IDA] [GO:0009897
"external side of plasma membrane" evidence=ISO] [GO:0014059
"regulation of dopamine secretion" evidence=ISO] [GO:0015464
"acetylcholine receptor activity" evidence=ISO] [GO:0016020
"membrane" evidence=ISO;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019233 "sensory perception of pain" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0034220 "ion transmembrane transport" evidence=ISO]
[GO:0035094 "response to nicotine" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=ISO] [GO:0035640
"exploration behavior" evidence=ISO] [GO:0042113 "B cell activation"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050877 "neurological
system process" evidence=ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051899
"membrane depolarization" evidence=ISO] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2346 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0030425
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 OrthoDB:EOG480HWN
CTD:1137 KO:K04806 EMBL:M15682 EMBL:L31620 EMBL:AF007212
IPI:IPI00214860 IPI:IPI00230863 RefSeq:NP_077330.1 UniGene:Rn.9697
PDB:1OLE PDBsum:1OLE ProteinModelPortal:P09483 SMR:P09483
STRING:P09483 PhosphoSite:P09483 GeneID:25590 KEGG:rno:25590
UCSC:RGD:2346 InParanoid:P09483 BindingDB:P09483 ChEMBL:CHEMBL307
NextBio:607263 ArrayExpress:P09483 Genevestigator:P09483
GermOnline:ENSRNOG00000011202 Uniprot:P09483
Length = 630
Score = 504 (182.5 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 97/165 (58%), Positives = 124/165 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 200 VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFIIRRLPLFYTINLIIPCLLI 259
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIP-PTSLVVPLLGKYLIFAMIL 181
S LTVL FYLPS+ GEKVTL IS+L+SL VF LL+ EIIP PTSLV+PL+G+YL+F MI
Sbjct: 260 SCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSPTSLVIPLIGEYLLFTMIF 319
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
V++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 320 VTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRP 364
Score = 151 (58.2 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 558 PP--QHLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWM 609
Query: 338 FTLAVLGGTAGIIL 351
F + L GT G+ L
Sbjct: 610 FIIVCLLGTVGLFL 623
Score = 41 (19.5 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 361 VPIDSKFAEIANSN---SQFKCPPPK 383
VP D K +E+ ++ S CPPPK
Sbjct: 433 VP-DLKTSEVEKASPCPSPGSCPPPK 457
>UNIPROTKB|P09483 [details] [associations]
symbol:Chrna4 "Neuronal acetylcholine receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2346 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0030425
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG480HWN CTD:1137 KO:K04806 EMBL:M15682 EMBL:L31620
EMBL:AF007212 IPI:IPI00214860 IPI:IPI00230863 RefSeq:NP_077330.1
UniGene:Rn.9697 PDB:1OLE PDBsum:1OLE ProteinModelPortal:P09483
SMR:P09483 STRING:P09483 PhosphoSite:P09483 GeneID:25590
KEGG:rno:25590 UCSC:RGD:2346 InParanoid:P09483 BindingDB:P09483
ChEMBL:CHEMBL307 NextBio:607263 ArrayExpress:P09483
Genevestigator:P09483 GermOnline:ENSRNOG00000011202 Uniprot:P09483
Length = 630
Score = 504 (182.5 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 97/165 (58%), Positives = 124/165 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 200 VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFIIRRLPLFYTINLIIPCLLI 259
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIP-PTSLVVPLLGKYLIFAMIL 181
S LTVL FYLPS+ GEKVTL IS+L+SL VF LL+ EIIP PTSLV+PL+G+YL+F MI
Sbjct: 260 SCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSPTSLVIPLIGEYLLFTMIF 319
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
V++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 320 VTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRP 364
Score = 151 (58.2 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 558 PP--QHLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWM 609
Query: 338 FTLAVLGGTAGIIL 351
F + L GT G+ L
Sbjct: 610 FIIVCLLGTVGLFL 623
Score = 41 (19.5 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 361 VPIDSKFAEIANSN---SQFKCPPPK 383
VP D K +E+ ++ S CPPPK
Sbjct: 433 VP-DLKTSEVEKASPCPSPGSCPPPK 457
>UNIPROTKB|F1PFF3 [details] [associations]
symbol:CHRNA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1137 KO:K04806 OMA:EDGVRCR
EMBL:AAEX03014142 EMBL:AAEX03014143 RefSeq:XP_543097.3
Ensembl:ENSCAFT00000020498 GeneID:485972 KEGG:cfa:485972
Uniprot:F1PFF3
Length = 618
Score = 499 (180.7 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 94/164 (57%), Positives = 122/164 (74%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD + + S EW I++ N + Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 199 VDQLDLWESGEWVIVDAVGTYNTRKYECCAEVYPDITYAFVIRRLPLFYTINLIIPCLLI 258
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 259 SCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 318
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 319 TLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDVVPRLLFMKRP 362
Score = 156 (60.0 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PP H P + R+ V++IA+H + +D T VKEDWKYVA+V+DR+FLW+
Sbjct: 545 PPR--HLPLSPALTRAVEGVQYIADHLKAED------TDFSVKEDWKYVAMVIDRIFLWV 596
Query: 338 FTLAVLGGTAGIIL 351
F + L GTAG+ L
Sbjct: 597 FIIVCLLGTAGLFL 610
>UNIPROTKB|F1NQD3 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087732 GO:GO:0051899 IPI:IPI00574373
OMA:DKTRGTG EMBL:AADN02066018 EMBL:AADN02066017
Ensembl:ENSGALT00000037792 Uniprot:F1NQD3
Length = 494
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 135/307 (43%), Positives = 196/307 (63%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD++EF+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPD---------GS 233
++SI +TV VLN+H+R+P TH M WVK VF+ LP++L+M+RPL GS
Sbjct: 315 TLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQRPLEQEKKNISKKTKKGS 374
Query: 234 HLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKH--LRPPAFSHAQCPPVMH 291
G K+H + L+S+ + H L+ A H + P +
Sbjct: 375 AKTSGKSKHSKHKDNKLHKEQRCCHCDKADDLTSTRRSQLSHQSLKWMA-EHTEYSPEVK 433
Query: 292 RSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
V+FIAE+ + Q++ TKE V++DWKYVA+V+DR+FLW+F + + GTAG+ +
Sbjct: 434 DVINNVQFIAENMKSQNE-TKE-----VEDDWKYVAMVIDRVFLWVFIILCVFGTAGLFI 487
Query: 352 QAPSLYD 358
Q P + D
Sbjct: 488 Q-PLIAD 493
>MGI|MGI:87887 [details] [associations]
symbol:Chrna3 "cholinergic receptor, nicotinic, alpha
polypeptide 3" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IPI] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IMP] [GO:0006937
"regulation of muscle contraction" evidence=IMP] [GO:0006940
"regulation of smooth muscle contraction" evidence=IMP] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007171 "activation of
transmembrane receptor protein tyrosine kinase activity"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0008144 "drug binding" evidence=ISO] [GO:0014056 "regulation of
acetylcholine secretion" evidence=IMP] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015464 "acetylcholine receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0035095
"behavioral response to nicotine" evidence=ISO;IMP] [GO:0042166
"acetylcholine binding" evidence=ISO] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0042493 "response to drug"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IC] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IMP]
[GO:0060084 "synaptic transmission involved in micturition"
evidence=ISO;IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:87887 GO:GO:0014069 GO:GO:0007507
GO:GO:0042493 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0060079
GO:GO:0007626 GO:GO:0007271 GO:GO:0048814 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0015464 CTD:1136 KO:K04805 GO:GO:0060084 GO:GO:0007171
GO:GO:0014056 GO:GO:0006940 GO:GO:0010035 EMBL:AF472588
EMBL:AY574262 EMBL:AK051730 EMBL:AK053497 EMBL:AK080415
IPI:IPI00225649 RefSeq:NP_660111.2 UniGene:Mm.63569
ProteinModelPortal:Q8R4G9 SMR:Q8R4G9 STRING:Q8R4G9
PhosphoSite:Q8R4G9 PRIDE:Q8R4G9 GeneID:110834 KEGG:mmu:110834
InParanoid:Q8R4G9 BindingDB:Q8R4G9 ChEMBL:CHEMBL1255158
NextBio:364751 Bgee:Q8R4G9 Genevestigator:Q8R4G9
GermOnline:ENSMUSG00000032303 Uniprot:Q8R4G9
Length = 499
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 143/321 (44%), Positives = 198/321 (61%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P ++E Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 190 MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLI 249
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 250 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 309
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP------------LYNP 230
++SI +TV VLNVH+R+P TH M WVK VF+ LPR++ M RP Y
Sbjct: 310 TLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSTEEDAPKTRNFYGA 369
Query: 231 DGSHL-----ADG-------PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRP 278
+ S+L AD P G+ G C H V +SN SSS + L
Sbjct: 370 ELSNLNCFSRADSKSCKEGYPCQDGTCGYCH-HRRVKISNFSANLTRSSSSESVDAVLSL 428
Query: 279 PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF 338
A S P + + V++IAE+ + Q+ + KE +++DWKYVA+V+DR+FLW+F
Sbjct: 429 SALS-----PEIKEAIQSVKYIAENMKAQNVA-KE-----IQDDWKYVAMVIDRIFLWVF 477
Query: 339 TLAVLGGTAGIILQAPSLYDD 359
L + GTAG+ LQ DD
Sbjct: 478 ILVCILGTAGLFLQPLMARDD 498
>UNIPROTKB|F1M7K6 [details] [associations]
symbol:Chrna3 "Neuronal acetylcholine receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0006940 "regulation of smooth muscle contraction"
evidence=IEA] [GO:0007171 "activation of transmembrane receptor
protein tyrosine kinase activity" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0014056 "regulation of
acetylcholine secretion" evidence=IEA] [GO:0015464 "acetylcholine
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IEA]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0060084 "synaptic transmission
involved in micturition" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2345 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0060084
GO:GO:0007171 GO:GO:0014056 GO:GO:0006940 IPI:IPI00198781
OMA:LMARDDT Ensembl:ENSRNOT00000019307 ArrayExpress:F1M7K6
Uniprot:F1M7K6
Length = 503
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 143/321 (44%), Positives = 198/321 (61%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P ++E Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 194 MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLI 253
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 254 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 313
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP------------LYNP 230
++SI +TV VLNVH+R+P TH M WVK VF+ LPR++ M RP Y
Sbjct: 314 TLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSGEGDTPKTRTFYGA 373
Query: 231 DGSHL-----ADG-------PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRP 278
+ S+L AD P G+ G C H V +SN SSS + L
Sbjct: 374 ELSNLNCFSRADSKSCKEGYPCQDGTCGYCH-HRRVKISNFSANLTRSSSSESVDAVLSL 432
Query: 279 PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF 338
A S P + + V++IAE+ + Q+ + KE +++DWKYVA+V+DR+FLW+F
Sbjct: 433 SALS-----PEIKEAIQSVKYIAENMKAQNVA-KE-----IQDDWKYVAMVIDRIFLWVF 481
Query: 339 TLAVLGGTAGIILQAPSLYDD 359
L + GTAG+ LQ DD
Sbjct: 482 ILVCILGTAGLFLQPLMARDD 502
>UNIPROTKB|E1BJF7 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 OMA:SKGCKEG EMBL:DAAA02052433
IPI:IPI00715081 ProteinModelPortal:E1BJF7
Ensembl:ENSBTAT00000004072 Uniprot:E1BJF7
Length = 401
Score = 516 (186.7 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 92/165 (55%), Positives = 128/165 (77%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 159 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 218
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 219 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 278
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
++SI +TV VLNVH+R+P TH M WVK +F+ LPR++ M RP+
Sbjct: 279 TLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPV 323
Score = 138 (53.6 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 258 NILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLI 317
N+L + + P D + ++S+ + P HRS +R ++ + + +E +
Sbjct: 311 NLLPRVMFMTRPVDFYFVQKSESYSN-KGPESSHRSISQIRQGVQYIKR--NVRREIFVF 367
Query: 318 MVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
+++DWKYVA+V+DR+FLW+F L + GTAG+ L
Sbjct: 368 QIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFL 401
>UNIPROTKB|F1RKU8 [details] [associations]
symbol:CHRNA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IEA] [GO:0035095 "behavioral
response to nicotine" evidence=IEA] [GO:0015464 "acetylcholine
receptor activity" evidence=IEA] [GO:0014056 "regulation of
acetylcholine secretion" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007171 "activation of transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0060079
GO:GO:0007626 GO:GO:0007271 GO:GO:0048814 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 GeneTree:ENSGT00620000087732 CTD:1136
KO:K04805 GO:GO:0060084 OMA:SKGCKEG GO:GO:0007171 GO:GO:0014056
GO:GO:0006940 EMBL:CT967296 RefSeq:XP_001925795.3
ProteinModelPortal:F1RKU8 Ensembl:ENSSSCT00000001958
GeneID:100151989 KEGG:ssc:100151989 ArrayExpress:F1RKU8
Uniprot:F1RKU8
Length = 505
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 142/321 (44%), Positives = 198/321 (61%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 196 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 255
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 256 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 315
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN------PDGSHLA 236
++SI +TV VLNVH+R+P TH M WVK VF++ LPR++ M RP+ P H A
Sbjct: 316 TLSIVITVFVLNVHYRTPTTHTMPTWVKTVFLELLPRVMFMTRPVSTEGNAPKPRPFHSA 375
Query: 237 D-------------G-----PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRP 278
+ G P G G C H V +SN SSS + L
Sbjct: 376 ELSNLNCFNRTESKGCKEGYPCQDGLCGYCH-HRRVKISNFSANLTRSSSSESVDAMLSL 434
Query: 279 PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF 338
A S P + + VR+IAE+ + Q+++ KE +++DWKYVA+V+DR+FLW+F
Sbjct: 435 SALS-----PEIKEAIQSVRYIAENMKAQNEA-KE-----IQDDWKYVAMVIDRIFLWVF 483
Query: 339 TLAVLGGTAGIILQAPSLYDD 359
L + GTAG+ LQ DD
Sbjct: 484 ILVCILGTAGLFLQPLMARDD 504
>UNIPROTKB|I3LN85 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0014059 "regulation of dopamine secretion" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GO:GO:0005892 GeneTree:ENSGT00620000087732 GO:GO:0051899 CTD:8973
KO:K04808 OMA:DKTRGTG EMBL:FP339586 RefSeq:XP_003359919.1
Ensembl:ENSSSCT00000025156 GeneID:100622106 KEGG:ssc:100622106
Uniprot:I3LN85
Length = 494
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 136/298 (45%), Positives = 192/298 (64%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+ +F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMDDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI VTV VLN+H+R+P TH M WVK +F++ LP IL+MRRPL + A P G
Sbjct: 315 TLSIAVTVFVLNIHYRTPTTHTMPTWVKTLFLRLLPHILMMRRPLDKRREARSAKTPN-G 373
Query: 243 GSGGSCKIH-GHVSLSNILTEAILSSSPQD---DSKHL--RPPAF--SHAQCPPVMHRSC 294
S G K H L E P++ + L +P + H + P +
Sbjct: 374 VSRGPAKGKVDHHGEPPPLQECCHCHQPKELATGKRRLSHQPLRWMTDHTEPSPEVEDVM 433
Query: 295 FCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + Q+ TKE V++DWKYVA+V+DR+FLW+F + + GT G+ LQ
Sbjct: 434 DSVQFIAENMKHQNQ-TKE-----VEDDWKYVAMVVDRVFLWVFIIVCVFGTVGLFLQ 485
>UNIPROTKB|P09480 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 EMBL:X07339 EMBL:X07340
EMBL:X07341 EMBL:X07342 EMBL:X07343 EMBL:X07344 EMBL:AJ250360
IPI:IPI00577533 PIR:S00377 RefSeq:NP_990146.1 UniGene:Gga.337
ProteinModelPortal:P09480 SMR:P09480 GeneID:395607 KEGG:gga:395607
CTD:1135 KO:K04804 NextBio:20815680 Uniprot:P09480
Length = 528
Score = 505 (182.8 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 97/164 (59%), Positives = 120/164 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y DITF +RR LFYT+N+IIPC+ I
Sbjct: 195 VDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTINLIIPCLLI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 255 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP TH M WV+ F+ F+PR L M+RP
Sbjct: 315 TLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRP 358
Score = 148 (57.2 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 39/108 (36%), Positives = 54/108 (50%)
Query: 244 SGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEH 303
SGGS H S +A +PQ K + P + R+ V++IA+H
Sbjct: 419 SGGSQGTQCHYSCERQAGKASGGPAPQVPLKGEEVGSDQGLTLSPSILRALEGVQYIADH 478
Query: 304 TRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
R +D VKEDWKYVA+V+DR+FLW+F + L GT G+ L
Sbjct: 479 LRAEDAD------FSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 520
>UNIPROTKB|P49581 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 OrthoDB:EOG45B1FG EMBL:X83889
EMBL:U48860 IPI:IPI00574373 PIR:T09289 RefSeq:NP_990695.1
UniGene:Gga.340 ProteinModelPortal:P49581 SMR:P49581 PRIDE:P49581
GeneID:396321 KEGG:gga:396321 CTD:8973 InParanoid:P49581 KO:K04808
NextBio:20816369 Uniprot:P49581
Length = 494
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 135/307 (43%), Positives = 196/307 (63%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD++EF+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPD---------GS 233
++SI +TV VLN+H+R+P TH M WVK VF+ LP++L+M+RPL GS
Sbjct: 315 TLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQRPLEQEKKNISKKTKKGS 374
Query: 234 HLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKH--LRPPAFSHAQCPPVMH 291
G K+H + L+S+ + H L+ A H + P +
Sbjct: 375 AKTSGKSKHSKHKDNKLHKEQRCCHCDKADDLTSTRRSRLSHQSLKWMA-EHTEYSPEVK 433
Query: 292 RSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
V+FIAE+ + Q++ TKE V++DWKYVA+V+DR+FLW+F + + GTAG+ +
Sbjct: 434 DVINNVQFIAENMKSQNE-TKE-----VEDDWKYVAMVIDRVFLWVFIILCVFGTAGLFI 487
Query: 352 QAPSLYD 358
Q P + D
Sbjct: 488 Q-PLIAD 493
>UNIPROTKB|G1K2Z1 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0006940 "regulation of smooth muscle
contraction" evidence=IEA] [GO:0007171 "activation of transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0014056
"regulation of acetylcholine secretion" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060084 "synaptic transmission involved in
micturition" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AADN02040457
Ensembl:ENSGALT00000004759 Uniprot:G1K2Z1
Length = 488
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 138/320 (43%), Positives = 199/320 (62%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 180 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINMIIPCLLI 239
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 240 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 299
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP------------LYNP 230
++SI +TV VLNVH+R+P+TH M WV+ +F+ LPRI+ M RP Y
Sbjct: 300 TLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPTSDEENNQKPKPFYTS 359
Query: 231 DGSHL-----------ADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPP 279
+ S+L DG + SC + + S+ SSS + P
Sbjct: 360 EFSNLNCFNSSEIKCCKDGFVCQDMACSCCQYQRMKFSDFSGNLTRSSSSESVD-----P 414
Query: 280 AFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFT 339
FS + P M + V++IAE+ +MQ+++ KE +++DWKYVA+V+DR+FLW+F
Sbjct: 415 LFSFSVLSPEMRDAIESVKYIAENMKMQNEA-KE-----IQDDWKYVAMVIDRIFLWVFI 468
Query: 340 LAVLGGTAGIILQAPSLYDD 359
L + GTAG+ LQ DD
Sbjct: 469 LVCILGTAGLFLQPLMTGDD 488
>UNIPROTKB|P09481 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 CTD:1136 KO:K04805
EMBL:M37336 EMBL:X07345 EMBL:X07346 EMBL:X07347 IPI:IPI00580530
PIR:S00378 RefSeq:NP_989747.1 UniGene:Gga.5095
ProteinModelPortal:P09481 SMR:P09481 GeneID:386578 KEGG:gga:386578
InParanoid:P09481 OMA:SKGCKEG NextBio:20813941 Uniprot:P09481
Length = 496
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 138/320 (43%), Positives = 199/320 (62%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 187 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINMIIPCLLI 246
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 247 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 306
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP------------LYNP 230
++SI +TV VLNVH+R+P+TH M WV+ +F+ LPRI+ M RP Y
Sbjct: 307 TLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPTSDEENNQKPKPFYTS 366
Query: 231 DGSHL-----------ADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPP 279
+ S+L DG + SC + + S+ SSS + P
Sbjct: 367 EFSNLNCFNSSEIKCCKDGFVCQDMACSCCQYQRMKFSDFSGNLTRSSSSESVD-----P 421
Query: 280 AFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFT 339
FS + P M + V++IAE+ +MQ+++ KE +++DWKYVA+V+DR+FLW+F
Sbjct: 422 LFSFSVLSPEMRDAIESVKYIAENMKMQNEA-KE-----IQDDWKYVAMVIDRIFLWVFI 475
Query: 340 LAVLGGTAGIILQAPSLYDD 359
L + GTAG+ LQ DD
Sbjct: 476 LVCILGTAGLFLQPLMTGDD 495
>UNIPROTKB|Q5IS76 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9598 "Pan troglodytes" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0035095
"behavioral response to nicotine" evidence=ISS] [GO:0060084
"synaptic transmission involved in micturition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007399
GO:GO:0014059 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
GeneTree:ENSGT00620000087732 GO:GO:0060084 OrthoDB:EOG45B1FG
GO:GO:0051899 CTD:8973 KO:K04808 OMA:DKTRGTG EMBL:AY665252
RefSeq:NP_001029266.1 UniGene:Ptr.6177 ProteinModelPortal:Q5IS76
SMR:Q5IS76 Ensembl:ENSPTRT00000037452 GeneID:472750 KEGG:ptr:472750
InParanoid:Q5IS76 NextBio:20849412 Uniprot:Q5IS76
Length = 494
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 133/297 (44%), Positives = 195/297 (65%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLVVPL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVVPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSH---LADGP 239
++SI VTV VLN+H+R+P TH M WVK VF++ LP++L+MR PL G+ + G
Sbjct: 315 TLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGL 374
Query: 240 LIGGSGGSCKIHG---HVS-LSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF 295
+ G HG H+ + L++S + S H +++ P +
Sbjct: 375 ARRPAKGKLASHGEPRHLKECFHCHKSNELATSKRRLSHHPLQWVVENSEHSPEVEDVIN 434
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + ++ TKE V++DWKYVA+V+DR+FLW+F + + GTAG+ LQ
Sbjct: 435 SVQFIAENMKSHNE-TKE-----VEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>UNIPROTKB|F1P8T6 [details] [associations]
symbol:CHRNA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03008991
Ensembl:ENSCAFT00000002686 OMA:LMARDDT Uniprot:F1P8T6
Length = 438
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 135/315 (42%), Positives = 196/315 (62%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 129 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 188
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 189 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 248
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL------YNPDGSHLA 236
++SI +TV VLNVH+R+P TH M WVK +F+ LPR++ M RP P S+ A
Sbjct: 249 TLSIVITVFVLNVHYRTPTTHTMPTWVKTIFLHLLPRVMFMTRPAGSDGHAQKPRPSYHA 308
Query: 237 DGPLIG--------G--SGGSCK--IHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHA 284
+ + G G +C+ H I ++ P+ S A S +
Sbjct: 309 ELSTLNCFRRAETRGCKEGCACQDGACSHCRHRRIKISNFSANLPRSSSSESISAALSLS 368
Query: 285 QCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLG 344
P + + V++IAE+ + Q+D+ KE +++DWKYVA+V+DR+FLW+F L +
Sbjct: 369 ALSPEIKEAIQSVKYIAENMKAQNDA-KE-----IQDDWKYVAMVIDRIFLWVFILVCIL 422
Query: 345 GTAGIILQAPSLYDD 359
GTAG+ LQ DD
Sbjct: 423 GTAGLFLQPLLARDD 437
>ZFIN|ZDB-GENE-041001-99 [details] [associations]
symbol:chrna2b "cholinergic receptor, nicotinic,
alpha polypeptide 2b (neuronal)" species:7955 "Danio rerio"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-041001-99 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:BX510657 IPI:IPI00491033
ProteinModelPortal:F1QFE7 Ensembl:ENSDART00000079613 Bgee:F1QFE7
Uniprot:F1QFE7
Length = 556
Score = 510 (184.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 100/169 (59%), Positives = 122/169 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y DIT+ +RR LFYT+N+IIPC+ I
Sbjct: 202 VDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLFYTINLIIPCLLI 261
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 262 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 321
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPD 231
++SI +TV VLNVH RSP THKM WV VF+ +PR L MRRP PD
Sbjct: 322 TLSIVITVFVLNVHHRSPSTHKMPCWVHSVFLDLIPRWLFMRRPA--PD 368
Score = 136 (52.9 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
V +IA+H R +D VKEDWKYVA+V+DR+FLW+F + L GT G+ L
Sbjct: 500 VHYIADHLRAEDAD------FSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGLFL 548
>RGD|69281 [details] [associations]
symbol:Chrna6 "cholinergic receptor, nicotinic, alpha 6
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA;ISO;IDA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0014059 "regulation of
dopamine secretion" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=ISO] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0051899 "membrane
depolarization" evidence=IEA;ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:69281 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG45B1FG GO:GO:0051899 CTD:8973 KO:K04808 EMBL:L08227
IPI:IPI00197477 RefSeq:NP_476532.1 UniGene:Rn.9696
ProteinModelPortal:P43143 SMR:P43143 STRING:P43143 PRIDE:P43143
GeneID:81721 KEGG:rno:81721 UCSC:RGD:69281 InParanoid:P43143
BindingDB:P43143 ChEMBL:CHEMBL4747 NextBio:615368
ArrayExpress:P43143 Genevestigator:P43143
GermOnline:ENSRNOG00000012283 Uniprot:P43143
Length = 493
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 135/299 (45%), Positives = 193/299 (64%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADG---P 239
++SI VTV VLN+H+R+P TH M WVK +F+Q P IL+MRRPL D + DG P
Sbjct: 315 TLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRPL---DKTKEMDGVKDP 371
Query: 240 LIGGSGGSCKIHGHVSLSNILTEA--ILSSSPQDDSKHL-RPPA---FSHAQCPPVMHRS 293
+ H +L E SS K L + PA +++ PP +
Sbjct: 372 KTHTKRPAKVKFTHRKEPKLLKECRHCHKSSEIAPGKRLSQQPAQWVTENSEHPPDVEDV 431
Query: 294 CFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + ++ TKE V++DWKY+A+V+DR+FLW+F + + GT G+ LQ
Sbjct: 432 IDSVQFIAENMKSHNE-TKE-----VEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 484
>UNIPROTKB|P43143 [details] [associations]
symbol:Chrna6 "Neuronal acetylcholine receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:69281 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG45B1FG GO:GO:0051899 CTD:8973 KO:K04808 EMBL:L08227
IPI:IPI00197477 RefSeq:NP_476532.1 UniGene:Rn.9696
ProteinModelPortal:P43143 SMR:P43143 STRING:P43143 PRIDE:P43143
GeneID:81721 KEGG:rno:81721 UCSC:RGD:69281 InParanoid:P43143
BindingDB:P43143 ChEMBL:CHEMBL4747 NextBio:615368
ArrayExpress:P43143 Genevestigator:P43143
GermOnline:ENSRNOG00000012283 Uniprot:P43143
Length = 493
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 135/299 (45%), Positives = 193/299 (64%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADG---P 239
++SI VTV VLN+H+R+P TH M WVK +F+Q P IL+MRRPL D + DG P
Sbjct: 315 TLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRPL---DKTKEMDGVKDP 371
Query: 240 LIGGSGGSCKIHGHVSLSNILTEA--ILSSSPQDDSKHL-RPPA---FSHAQCPPVMHRS 293
+ H +L E SS K L + PA +++ PP +
Sbjct: 372 KTHTKRPAKVKFTHRKEPKLLKECRHCHKSSEIAPGKRLSQQPAQWVTENSEHPPDVEDV 431
Query: 294 CFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + ++ TKE V++DWKY+A+V+DR+FLW+F + + GT G+ LQ
Sbjct: 432 IDSVQFIAENMKSHNE-TKE-----VEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 484
>UNIPROTKB|P09482 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0001508 "regulation of
action potential" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0014059 "regulation of dopamine secretion"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0042113 "B cell activation" evidence=IEA]
[GO:0050890 "cognition" evidence=IEA] [GO:0051899 "membrane
depolarization" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979 GO:GO:0009897
GO:GO:0007610 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006281 GO:GO:0001666
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 GO:GO:0001508
OrthoDB:EOG480HWN GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:X07348 EMBL:X07349 EMBL:X07350 EMBL:X07351 EMBL:X07352
EMBL:X07399 EMBL:AJ250361 IPI:IPI00575000 PIR:S00379
RefSeq:NP_990145.1 UniGene:Gga.4440 ProteinModelPortal:P09482
SMR:P09482 Ensembl:ENSGALT00000009316 GeneID:395606 KEGG:gga:395606
CTD:1137 InParanoid:P09482 KO:K04806 OMA:EDGVRCR BindingDB:P09482
ChEMBL:CHEMBL5569 NextBio:20815679 GO:GO:0042113 GO:GO:0006816
GO:GO:0051899 Uniprot:P09482
Length = 622
Score = 505 (182.8 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 95/164 (57%), Positives = 123/164 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +++ S EW I+ N K Y CC E Y DIT++ +RR LFYT+N+IIPC+ I
Sbjct: 193 VDQLDYWESGEWVIINAVGNYNSKKYECCTEIYPDITYSFIIRRLPLFYTINLIIPCLLI 252
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 253 SCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 312
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP+TH M WV+RVF+ +PR+L M+RP
Sbjct: 313 TLSIIITVFVLNVHHRSPRTHTMPDWVRRVFLDIVPRLLFMKRP 356
Score = 137 (53.3 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
V +IA+H R +D VKEDWKYVA+V+DR+FLW+F + L GT G+ L
Sbjct: 566 VHYIADHLRAEDAD------FSVKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 614
>UNIPROTKB|Q15825 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0015464 "acetylcholine receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 EMBL:CH471080 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
OrthoDB:EOG45B1FG GO:GO:0051899 CTD:8973 KO:K04808 EMBL:U62435
EMBL:Y16282 EMBL:AB079251 EMBL:AK298798 EMBL:AK313521 EMBL:AC087533
EMBL:BC014456 IPI:IPI00019948 IPI:IPI00981699 RefSeq:NP_001186208.1
RefSeq:NP_004189.1 UniGene:Hs.103128 ProteinModelPortal:Q15825
SMR:Q15825 STRING:Q15825 PhosphoSite:Q15825 DMDM:2492620
PRIDE:Q15825 DNASU:8973 Ensembl:ENST00000276410
Ensembl:ENST00000534622 GeneID:8973 KEGG:hsa:8973 UCSC:uc003xpj.3
GeneCards:GC08M042625 HGNC:HGNC:15963 MIM:606888 neXtProt:NX_Q15825
PharmGKB:PA26492 InParanoid:Q15825 OMA:DKTRGTG PhylomeDB:Q15825
BindingDB:Q15825 ChEMBL:CHEMBL2356 GenomeRNAi:8973 NextBio:33673
ArrayExpress:Q15825 Bgee:Q15825 CleanEx:HS_CHRNA6
Genevestigator:Q15825 GermOnline:ENSG00000147434 Uniprot:Q15825
Length = 494
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 132/297 (44%), Positives = 194/297 (65%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLVVPL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVVPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSH---LADGP 239
++SI VTV VLN+H+R+P TH M WVK VF++ LP++L+MR PL G+ + G
Sbjct: 315 TLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGL 374
Query: 240 LIGGSGGSCKIHG---HVS-LSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF 295
+ G HG H+ + L++S + S +++ P +
Sbjct: 375 ARRPAKGKLASHGEPRHLKECFHCHKSNELATSKRRLSHQPLQWVVENSEHSPEVEDVIN 434
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + ++ TKE V++DWKYVA+V+DR+FLW+F + + GTAG+ LQ
Sbjct: 435 SVQFIAENMKSHNE-TKE-----VEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>ZFIN|ZDB-GENE-040108-2 [details] [associations]
symbol:chrna2a "cholinergic receptor, nicotinic,
alpha polypeptide 2a (neuronal)" species:7955 "Danio rerio"
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-040108-2 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 EMBL:AY256908 IPI:IPI00759125
UniGene:Dr.134391 ProteinModelPortal:Q7ZZP7 SMR:Q7ZZP7
InParanoid:Q7ZZP7 ArrayExpress:Q7ZZP7 Uniprot:Q7ZZP7
Length = 520
Score = 496 (179.7 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 96/164 (58%), Positives = 118/164 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y DIT+ +RR L YT+N+IIPC+ I
Sbjct: 198 VDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLSYTINLIIPCLLI 257
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 258 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 317
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP TH M WV VF+ +PR L MRRP
Sbjct: 318 TLSIVITVFVLNVHHRSPSTHSMPRWVHSVFLDHIPRWLFMRRP 361
Score = 145 (56.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 288 PVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTA 347
P + R+ VR+IA+H + +D+ VKEDWKYVA+V+DR+FLW+F + L GT
Sbjct: 455 PCVLRALEGVRYIADHLKAEDED------FSVKEDWKYVAMVIDRIFLWMFIIVCLLGTI 508
Query: 348 GIIL 351
G+ L
Sbjct: 509 GLFL 512
>UNIPROTKB|F1RJS5 [details] [associations]
symbol:CHRNA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 OMA:ACAGHVA
GO:GO:0005892 GO:GO:0015464 GeneTree:ENSGT00620000087732
EMBL:CU633626 Ensembl:ENSSSCT00000010597 Uniprot:F1RJS5
Length = 538
Score = 499 (180.7 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 98/177 (55%), Positives = 123/177 (69%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIPC+ I
Sbjct: 222 VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTINLIIPCLLI 281
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 282 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 341
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGP 239
++SI +TV VLNVH RSP TH M WV+ F+ +PR L+M RP P L D P
Sbjct: 342 TLSIVITVFVLNVHHRSPSTHNMPHWVRVAFLGCVPRWLLMSRP---PPPLELPDSP 395
Score = 140 (54.3 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 288 PVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
P M ++ V +IA+H R +D DS+ VKEDW+YVA+V+DR+FLW+F L GT
Sbjct: 473 PRMQKALEGVHYIADHLRSEDADSS-------VKEDWRYVAMVIDRIFLWLFILVCFLGT 525
Query: 347 AGIIL 351
G+ L
Sbjct: 526 IGLFL 530
>ZFIN|ZDB-GENE-090505-3 [details] [associations]
symbol:chrna4 "cholinergic receptor, nicotinic, alpha
4" species:7955 "Danio rerio" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-090505-3 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG480HWN GeneTree:ENSGT00620000087732 CTD:1137 KO:K04806
EMBL:BX511174 EMBL:CR762408 EMBL:BC171545 EMBL:DQ822508
IPI:IPI00510761 RefSeq:NP_001041528.1 RefSeq:XP_692148.2
UniGene:Dr.103932 SMR:Q0PJT8 Ensembl:ENSDART00000018614
Ensembl:ENSDART00000104115 GeneID:556619 GeneID:563696
KEGG:dre:556619 KEGG:dre:563696 InParanoid:Q0PJT8 OMA:ESIREDW
NextBio:20881572 Uniprot:Q0PJT8
Length = 627
Score = 498 (180.4 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 115/257 (44%), Positives = 155/257 (60%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +++ S EW I+ N K Y CC E Y DIT++ +RR LFYT+N+IIPC+ I
Sbjct: 192 VDQMDYWESGEWVIINAVGTYNIKKYECCTEIYPDITYSFIIRRLPLFYTINLIIPCLLI 251
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPS+ EK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 252 SCLTVLVFYLPSECAEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 311
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI +TV VLNVH RS +TH M WV+++F+ +PR L M+RP P G LI
Sbjct: 312 TLSIIITVFVLNVHHRSSRTHSMPHWVRQLFLHLVPRYLFMKRP---PASGKRNCGKLIE 368
Query: 243 GSGGSCKIHGHV-SLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSC------F 295
+H S S L IL SPQ HL P S AQ V S F
Sbjct: 369 ------MMHKQANSQSMFLRNNILDISPQSPIPHLGPT--SAAQQDQVQQDSTSPKPLFF 420
Query: 296 CVRFIAEHTRMQDDSTK 312
C ++++ +Q+++++
Sbjct: 421 CSSPSSQYSILQEENSQ 437
Score = 138 (53.6 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
V++IA+H R +D V+EDWKYVA+V+DR+FLW+F L + GT G+ L
Sbjct: 571 VQYIADHLRAEDSD------FSVREDWKYVAMVIDRIFLWMFVLVCILGTVGLFL 619
>ZFIN|ZDB-GENE-090312-169 [details] [associations]
symbol:chrnb2a "cholinergic receptor, nicotinic,
beta 2a" species:7955 "Danio rerio" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-090312-169
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 EMBL:CR376846 IPI:IPI00489440
ProteinModelPortal:E7F8A2 Ensembl:ENSDART00000002532 Uniprot:E7F8A2
Length = 490
Score = 482 (174.7 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 91/160 (56%), Positives = 120/160 (75%)
Query: 67 EFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLT 126
++ S EWDI+ +P RNE D YLD+T++ ++RK LFYT+N+IIPC+ I+ L
Sbjct: 196 DYTPSGEWDIVSLPGRRNEDL---SDPTYLDVTYDFVIKRKPLFYTINLIIPCVLITSLA 252
Query: 127 VLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISI 186
+L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+ SI
Sbjct: 253 ILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMVLVTFSI 312
Query: 187 CVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+V VLNVH RSP TH+M WVKRVF+ LP L+MRRP
Sbjct: 313 VTSVCVLNVHHRSPSTHRMPEWVKRVFLHKLPFFLLMRRP 352
Score = 154 (59.3 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
VRFIAEH +++DD E + EDWKYVA+V+DRLFLWIF L + GT G+ +Q P
Sbjct: 427 VRFIAEHMKIEDDD--EGII----EDWKYVAMVIDRLFLWIFILVCVVGTLGLFVQ-PLF 479
Query: 357 YDDRVPI 363
P+
Sbjct: 480 QSYNTPV 486
>UNIPROTKB|Q19AE5 [details] [associations]
symbol:CHRNB2 "Cholinergic receptor nicotinic beta 2"
species:9669 "Mustela putorius furo" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007613 "memory"
evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0035095 "behavioral response to nicotine" evidence=ISS]
[GO:0042166 "acetylcholine binding" evidence=ISS] [GO:0050877
"neurological system process" evidence=ISS] [GO:0050890 "cognition"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007613 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0001666 GO:GO:0008542
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 EMBL:DQ533689 ProteinModelPortal:Q19AE5 SMR:Q19AE5
Uniprot:Q19AE5
Length = 478
Score = 478 (173.3 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 94/162 (58%), Positives = 121/162 (74%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 194 LDDFTPSGEWDIVALPGRRNEN---PDDSTYVDITYDFVIRRKPLFYTINLIIPCVLITS 250
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L VL FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 251 LAVLVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 310
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
SI +V VLNVH RSP TH MAPWVK VF++ LP +L M+ P
Sbjct: 311 SIVTSVCVLNVHHRSPSTHTMAPWVKVVFLEKLPALLFMQPP 352
Score = 155 (59.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 31/56 (55%), Positives = 37/56 (66%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
VRFIA+H R +DD V EDWKYVA+V+DRLFLWIF + GT G+ LQ
Sbjct: 407 VRFIADHVRSEDDDQS------VSEDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQ 456
>UNIPROTKB|F1N9F1 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 EMBL:AADN02018409
EMBL:AADN02018408 IPI:IPI00683362 ProteinModelPortal:F1N9F1
Ensembl:ENSGALT00000031566 Uniprot:F1N9F1
Length = 499
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 145/319 (45%), Positives = 187/319 (58%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y DITF +RR LFYT+N+IIPC+ I
Sbjct: 188 VDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTINLIIPCLLI 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 248 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 307
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP-----------LYNPD 231
++SI +TV VLNVH RSP TH M WV+ F+ F+PR L M+RP Y+P
Sbjct: 308 TLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRPPLLLPTEGTTGQYDPP 367
Query: 232 GSHLA----------DGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAF 281
G+ L+ D + SGGS H S +A +PQ K +
Sbjct: 368 GTRLSTSRCWLETDVDDNRVP-SGGSQGTQCHYSCGRQAGKASGGPAPQVPLKGEEVGSD 426
Query: 282 SHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLA 341
P + R+ V++IA+H R +D VKEDWKYVA+V+DR+FLW+F +
Sbjct: 427 QGLTLSPSILRALEGVQYIADHLRAEDAD------FSVKEDWKYVAMVIDRIFLWMFIIV 480
Query: 342 VLGGTAGIILQAPSL--YD 358
L GT G+ L P L YD
Sbjct: 481 CLLGTVGLFLP-PYLAGYD 498
>UNIPROTKB|E2R3I1 [details] [associations]
symbol:CHRNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 OMA:ACAGHVA GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 EMBL:AAEX03014346
ProteinModelPortal:E2R3I1 Ensembl:ENSCAFT00000013549 Uniprot:E2R3I1
Length = 531
Score = 494 (179.0 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 94/165 (56%), Positives = 120/165 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIPC+ I
Sbjct: 220 VDLKDYWESGEWAIVNATGTYNTKKYDCCAEIYPDVTYYFVIRRLPLFYTINLIIPCLLI 279
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ +IIP TSLV+PL+G+YL+F MI V
Sbjct: 280 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITDIIPSTSLVIPLIGEYLLFTMIFV 339
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
++SI +TV VLNVH RSP TH M WV+ F+ +PR L+M RPL
Sbjct: 340 TLSIVITVFVLNVHHRSPSTHTMPRWVRVAFLGCVPRWLLMNRPL 384
Score = 138 (53.6 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 288 PVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
P + ++ V +IA+H R +D DS+ VKEDWKYVA+V+DR+FLW+F + GT
Sbjct: 466 PRIQKALEGVHYIADHLRSEDADSS-------VKEDWKYVAMVIDRIFLWLFIIVCFLGT 518
Query: 347 AGIIL 351
G+ L
Sbjct: 519 VGLFL 523
>ZFIN|ZDB-GENE-070821-3 [details] [associations]
symbol:chrnb2b "cholinergic receptor, nicotinic, beta
2b" species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-070821-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 EMBL:BX950871 IPI:IPI00504047
Ensembl:ENSDART00000041625 Bgee:E7F4S7 Uniprot:E7F4S7
Length = 543
Score = 479 (173.7 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 98/187 (52%), Positives = 129/187 (68%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 188 MDDFTPSGEWDIIALPGRRNEN---PSDPTYVDITYDFIIRRKPLFYTINLIIPCVLITS 244
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 245 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 304
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHL-----ADGP 239
SI +V VLNVH RSP TH M PWVK VF+ LP +L MR+P + + L A+
Sbjct: 305 SIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPALLFMRQPRNSSERQRLRQRRRANEQ 364
Query: 240 LIGGSGG 246
GG GG
Sbjct: 365 QEGGRGG 371
Score = 152 (58.6 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 33/69 (47%), Positives = 40/69 (57%)
Query: 284 AQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
AQ P + VRFIA H + +DD V EDWKYVA+V+DRLFLWIF +
Sbjct: 465 AQACPGFEEAVDGVRFIANHMKSEDDDRS------VSEDWKYVAMVIDRLFLWIFVFVCV 518
Query: 344 GGTAGIILQ 352
GT G+ LQ
Sbjct: 519 FGTIGMFLQ 527
>UNIPROTKB|F1PQB1 [details] [associations]
symbol:CHRNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 CTD:1141 KO:K04813
GeneTree:ENSGT00620000087691 OMA:YSEIPLR EMBL:AAEX03005347
RefSeq:XP_547565.2 Ensembl:ENSCAFT00000027196 GeneID:490443
KEGG:cfa:490443 Uniprot:F1PQB1
Length = 478
Score = 478 (173.3 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 93/162 (57%), Positives = 122/162 (75%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 194 LDDFTPSGEWDIVALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCVLITS 250
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 251 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 310
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
SI +V VLNVH RSP TH MAPWVK VF++ LP +L M++P
Sbjct: 311 SIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFMQQP 352
Score = 153 (58.9 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 31/56 (55%), Positives = 37/56 (66%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
VRFIA+H R +DD V EDWKYVA+V+DRLFLWIF + GT G+ LQ
Sbjct: 407 VRFIADHVRNEDDDQS------VSEDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 456
>MGI|MGI:87891 [details] [associations]
symbol:Chrnb2 "cholinergic receptor, nicotinic, beta
polypeptide 2 (neuronal)" species:10090 "Mus musculus" [GO:0001508
"regulation of action potential" evidence=IGI;IMP] [GO:0001661
"conditioned taste aversion" evidence=IMP] [GO:0001666 "response to
hypoxia" evidence=ISO;IMP] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=ISO;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=IMP;IDA] [GO:0006816 "calcium ion
transport" evidence=IGI] [GO:0006939 "smooth muscle contraction"
evidence=IGI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007271 "synaptic transmission, cholinergic" evidence=ISO]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0007612 "learning"
evidence=ISO;IMP] [GO:0007613 "memory" evidence=ISO;IMP]
[GO:0007626 "locomotory behavior" evidence=IMP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=IGI] [GO:0008542 "visual learning" evidence=ISO;IMP]
[GO:0009897 "external side of plasma membrane" evidence=IDA]
[GO:0014059 "regulation of dopamine secretion" evidence=IMP]
[GO:0015464 "acetylcholine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IMP] [GO:0021562 "vestibulocochlear nerve development"
evidence=IMP] [GO:0021631 "optic nerve morphogenesis" evidence=IMP]
[GO:0021771 "lateral geniculate nucleus development" evidence=IMP]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IC;IGI] [GO:0032225 "regulation of synaptic
transmission, dopaminergic" evidence=IMP] [GO:0032226 "positive
regulation of synaptic transmission, dopaminergic" evidence=IMP]
[GO:0033603 "positive regulation of dopamine secretion"
evidence=IMP] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP;IDA] [GO:0035094 "response to nicotine"
evidence=ISO;IGI;IMP] [GO:0035095 "behavioral response to nicotine"
evidence=ISO;IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042053 "regulation of dopamine metabolic process"
evidence=IMP] [GO:0042113 "B cell activation" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0042220
"response to cocaine" evidence=IMP] [GO:0042320 "regulation of
circadian sleep/wake cycle, REM sleep" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI;IMP] [GO:0045188
"regulation of circadian sleep/wake cycle, non-REM sleep"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IMP] [GO:0045759 "negative regulation of action
potential" evidence=IMP] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050877 "neurological system
process" evidence=ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0051291 "protein heterooligomerization" evidence=ISO]
[GO:0051899 "membrane depolarization" evidence=IMP] [GO:0051963
"regulation of synapse assembly" evidence=IMP] [GO:0060084
"synaptic transmission involved in micturition" evidence=IGI]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87891
GO:GO:0009897 GO:GO:0045471 GO:GO:0042220 GO:GO:0007613
GO:GO:0019233 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0048814
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0060084 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899
GO:GO:0007605 HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4 GO:GO:0021952
GO:GO:0001661 GO:GO:0021771 GO:GO:0045759 GO:GO:0021631
GO:GO:0030890 GO:GO:0032226 GO:GO:0045188 GO:GO:0042320
GO:GO:0042053 GO:GO:0051963 GO:GO:0006939 GO:GO:0035176
GO:GO:0021562 EMBL:AF299083 IPI:IPI00606399 UniGene:Mm.35088
ProteinModelPortal:Q9ERK7 SMR:Q9ERK7 DIP:DIP-48730N STRING:Q9ERK7
PRIDE:Q9ERK7 InParanoid:Q9ERK7 Genevestigator:Q9ERK7
GermOnline:ENSMUSG00000027950 Uniprot:Q9ERK7
Length = 501
Score = 476 (172.6 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 92/162 (56%), Positives = 122/162 (75%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 194 LDDFTPSGEWDIIALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCVLITS 250
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 251 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 310
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
SI +V VLNVH RSP TH MAPWVK VF++ LP +L +++P
Sbjct: 311 SIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFLQQP 352
Score = 155 (59.6 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
VRFIA+H R +DD V+EDWKYVA+V+DRLFLWIF + GT G+ LQ
Sbjct: 430 VRFIADHMRSEDDDQS------VREDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 479
>UNIPROTKB|J3KMY9 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 EMBL:AF311103
HGNC:HGNC:1956 ChiTaRS:CHRNA2 ProteinModelPortal:J3KMY9
Ensembl:ENST00000240132 Uniprot:J3KMY9
Length = 514
Score = 489 (177.2 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 93/164 (56%), Positives = 118/164 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIPC+ I
Sbjct: 205 VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTINLIIPCLLI 264
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 265 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 324
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP TH M WV+ + +PR L+M RP
Sbjct: 325 TLSIVITVFVLNVHHRSPSTHTMPHWVRGALLGCVPRWLLMNRP 368
Score = 141 (54.7 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 288 PVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
P M ++ V +IA+H R +D DS+ VKEDWKYVA+V+DR+FLW+F + GT
Sbjct: 449 PHMQKALEGVHYIADHLRSEDADSS-------VKEDWKYVAMVIDRIFLWLFIIVCFLGT 501
Query: 347 AGIIL 351
G+ L
Sbjct: 502 IGLFL 506
>UNIPROTKB|Q15822 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0006811 "ion transport" evidence=NAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 DrugBank:DB01199
DrugBank:DB01245 DrugBank:DB00483 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 DrugBank:DB00184 eggNOG:NOG290206 OMA:ACAGHVA
GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804 EMBL:U62431
EMBL:Y16281 EMBL:AF311103 EMBL:BC153866 IPI:IPI00019942
RefSeq:NP_000733.2 UniGene:Hs.57718 ProteinModelPortal:Q15822
SMR:Q15822 STRING:Q15822 PhosphoSite:Q15822 DMDM:308153405
PRIDE:Q15822 Ensembl:ENST00000407991 Ensembl:ENST00000520933
GeneID:1135 KEGG:hsa:1135 UCSC:uc010lur.3 GeneCards:GC08M027374
H-InvDB:HIX0034372 HGNC:HGNC:1956 MIM:118502 MIM:610353
neXtProt:NX_Q15822 Orphanet:98784 PharmGKB:PA26489
InParanoid:Q15822 OrthoDB:EOG480HWN PhylomeDB:Q15822
BindingDB:Q15822 ChEMBL:CHEMBL1794 ChiTaRS:CHRNA2 DrugBank:DB00732
DrugBank:DB00810 DrugBank:DB00411 DrugBank:DB00565 DrugBank:DB00514
DrugBank:DB01334 DrugBank:DB01135 DrugBank:DB00504 DrugBank:DB00657
DrugBank:DB01336 DrugBank:DB00416 DrugBank:DB01226 DrugBank:DB01337
DrugBank:DB01338 DrugBank:DB00728 GenomeRNAi:1135 NextBio:4722
ArrayExpress:Q15822 Bgee:Q15822 CleanEx:HS_CHRNA2
Genevestigator:Q15822 GermOnline:ENSG00000120903 Uniprot:Q15822
Length = 529
Score = 489 (177.2 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 93/164 (56%), Positives = 118/164 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIPC+ I
Sbjct: 220 VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTINLIIPCLLI 279
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 280 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 339
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP TH M WV+ + +PR L+M RP
Sbjct: 340 TLSIVITVFVLNVHHRSPSTHTMPHWVRGALLGCVPRWLLMNRP 383
Score = 141 (54.7 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 288 PVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
P M ++ V +IA+H R +D DS+ VKEDWKYVA+V+DR+FLW+F + GT
Sbjct: 464 PHMQKALEGVHYIADHLRSEDADSS-------VKEDWKYVAMVIDRIFLWLFIIVCFLGT 516
Query: 347 AGIIL 351
G+ L
Sbjct: 517 IGLFL 521
>MGI|MGI:87886 [details] [associations]
symbol:Chrna2 "cholinergic receptor, nicotinic, alpha
polypeptide 2 (neuronal)" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008144 "drug binding" evidence=ISO] [GO:0015464 "acetylcholine
receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=ISO]
[GO:0071944 "cell periphery" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
CTD:1135 KO:K04804 OrthoDB:EOG480HWN EMBL:AY574261 EMBL:BC011490
IPI:IPI00128446 RefSeq:NP_659052.1 UniGene:Mm.57350
ProteinModelPortal:Q91X60 SMR:Q91X60 STRING:Q91X60
PhosphoSite:Q91X60 PRIDE:Q91X60 Ensembl:ENSMUST00000022620
GeneID:110902 KEGG:mmu:110902 UCSC:uc007ujx.1
GeneTree:ENSGT00620000087732 InParanoid:Q91X60 OMA:EDENICM
NextBio:364901 Bgee:Q91X60 Genevestigator:Q91X60
GermOnline:ENSMUSG00000022041 GO:GO:0071944 Uniprot:Q91X60
Length = 512
Score = 490 (177.5 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 95/169 (56%), Positives = 121/169 (71%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
ER VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIP
Sbjct: 194 ERT-VDLKDYWESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRRLPLFYTINLIIP 252
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+ IS LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F
Sbjct: 253 CLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFT 312
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
MI V++SI +TV VLNVH RSP TH M WV+ + +PR L+M RPL
Sbjct: 313 MIFVTLSIVITVFVLNVHHRSPSTHNMPNWVRVALLGRVPRWLMMNRPL 361
Score = 139 (54.0 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLW 336
P S P + ++ V +IA+H R +D DS+ VKEDWKYVA+V+DR+FLW
Sbjct: 437 PSQASEILLSPQIQKALEGVHYIADHLRSEDADSS-------VKEDWKYVAMVVDRIFLW 489
Query: 337 IFTLAVLGGTAGIIL 351
+F + GT G+ L
Sbjct: 490 LFIIVCFLGTIGLFL 504
>RGD|621533 [details] [associations]
symbol:Chrna2 "cholinergic receptor, nicotinic, alpha 2
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISO;IDA] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051291 "protein heterooligomerization"
evidence=IDA] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:621533
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 OMA:ACAGHVA GO:GO:0005892 GO:GO:0015464 CTD:1135
KO:K04804 OrthoDB:EOG480HWN GeneTree:ENSGT00620000087732
EMBL:L10077 EMBL:M20297 EMBL:M20292 EMBL:M20293 EMBL:M20294
EMBL:M20295 EMBL:M20296 EMBL:AY574253 IPI:IPI00196723 PIR:A40110
RefSeq:NP_596911.1 UniGene:Rn.9713 ProteinModelPortal:P12389
SMR:P12389 STRING:P12389 PhosphoSite:P12389
Ensembl:ENSRNOT00000023475 GeneID:170945 KEGG:rno:170945
UCSC:RGD:621533 InParanoid:P12389 BindingDB:P12389
ChEMBL:CHEMBL2584 NextBio:621469 Genevestigator:P12389
GermOnline:ENSRNOG00000017424 Uniprot:P12389
Length = 511
Score = 490 (177.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 95/169 (56%), Positives = 121/169 (71%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
ER VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIP
Sbjct: 194 ERT-VDLKDYWESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRRLPLFYTINLIIP 252
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+ IS LTVL FYLPS+ GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F
Sbjct: 253 CLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFT 312
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
MI V++SI +TV VLNVH RSP TH M WV+ + +PR L+M RPL
Sbjct: 313 MIFVTLSIVITVFVLNVHHRSPSTHNMPNWVRVALLGRVPRWLMMNRPL 361
Score = 131 (51.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLW 336
P S P + ++ V +IA+ R +D DS+ VKEDWKYVA+V+DR+FLW
Sbjct: 436 PSQASEILLSPQIQKALEGVHYIADRLRSEDADSS-------VKEDWKYVAMVVDRIFLW 488
Query: 337 IFTLAVLGGTAGIIL 351
+F + GT G+ L
Sbjct: 489 LFIIVCFLGTIGLFL 503
>MGI|MGI:106213 [details] [associations]
symbol:Chrna6 "cholinergic receptor, nicotinic, alpha
polypeptide 6" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IMP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0014059 "regulation of dopamine
secretion" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051899 "membrane
depolarization" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:106213 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
GeneTree:ENSGT00620000087732 OrthoDB:EOG45B1FG GO:GO:0051899
CTD:8973 KO:K04808 OMA:DKTRGTG EMBL:AJ245706 EMBL:AK149262
EMBL:CH466580 EMBL:BC031985 IPI:IPI00605970 RefSeq:NP_067344.2
UniGene:Mm.283137 ProteinModelPortal:Q9R0W9 SMR:Q9R0W9
STRING:Q9R0W9 PhosphoSite:Q9R0W9 PRIDE:Q9R0W9
Ensembl:ENSMUST00000033882 GeneID:11440 KEGG:mmu:11440
InParanoid:Q3UEY4 BindingDB:Q9R0W9 ChEMBL:CHEMBL6183 NextBio:278740
Bgee:Q9R0W9 Genevestigator:Q9R0W9 GermOnline:ENSMUSG00000031491
Uniprot:Q9R0W9
Length = 494
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 129/298 (43%), Positives = 187/298 (62%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+++F+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 195 VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 254
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 255 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 314
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI VTV VLN+H+R+P TH M WVK +F+Q P IL+MR+PL + P
Sbjct: 315 TLSIVVTVFVLNIHYRTPATHTMPKWVKTIFLQAFPSILMMRKPLDKTKEAGGVKDPK-S 373
Query: 243 GSGGSCKIH-GHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQ--CPPVMHRSCF---- 295
+ K+ H S +L E D + R + A+ H S
Sbjct: 374 HTKRPAKVKFTHRGESKLLKECHHCQKSSDIAPGKRRSSQQPARWVAENSEHSSDVEDVI 433
Query: 296 -CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V+FIAE+ + ++ T E V++DWKY+A+V+DR+FLW+F + + GT G+ LQ
Sbjct: 434 ESVQFIAENMKSHNE-TNE-----VEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 485
>UNIPROTKB|P19370 [details] [associations]
symbol:chrnb2 "Neuronal acetylcholine receptor subunit
beta-2" species:7957 "Carassius auratus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007613 "memory"
evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0035095 "behavioral response to nicotine" evidence=ISS]
[GO:0042166 "acetylcholine binding" evidence=ISS] [GO:0050877
"neurological system process" evidence=ISS] [GO:0050890 "cognition"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007613 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0001666 GO:GO:0008542
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 EMBL:X54052 PIR:S14703 ProteinModelPortal:P19370
SMR:P19370 Uniprot:P19370
Length = 459
Score = 463 (168.0 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 90/160 (56%), Positives = 118/160 (73%)
Query: 67 EFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLT 126
++ S EWDI+ +P +NE D YLDIT++ ++RK LFYT+N+IIPC+ I+ L
Sbjct: 166 DYTPSGEWDIVSLPGRKNEDPN---DLTYLDITYDFVIKRKPLFYTINLIIPCVLITSLA 222
Query: 127 VLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISI 186
+L FYLPSD GEKVTL +S+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+ SI
Sbjct: 223 ILVFYLPSDCGEKVTLCMSVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMVLVTFSI 282
Query: 187 CVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+V VLNVH RSP TH M WVK VF+ LP L+MRRP
Sbjct: 283 VTSVCVLNVHHRSPSTHYMPEWVKCVFLHKLPAFLLMRRP 322
Score = 154 (59.3 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
VRFIAEH +++DD E + EDWKYVA+V+DRLFLWIF L + GT G+ +Q P
Sbjct: 392 VRFIAEHMKIEDDD--EGII----EDWKYVAMVIDRLFLWIFILVCVVGTLGLFVQ-PLF 444
Query: 357 YDDRVPI 363
P+
Sbjct: 445 QSYNTPV 451
>UNIPROTKB|P26153 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG290206 HOGENOM:HOG000006757 EMBL:J05643 IPI:IPI00580226
PIR:A39218 UniGene:Gga.341 ProteinModelPortal:P26153 SMR:P26153
Uniprot:P26153
Length = 470
Score = 467 (169.5 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 90/165 (54%), Positives = 120/165 (72%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R E D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 172 MDDFTPSGEWDIVALPGRRTEN---PLDPNYVDVTYDFIIKRKPLFYTINLIIPCVLITS 228
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 229 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 288
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN 229
SI +V VLNVH RSP TH M PWVK VF++ LP L M+RP N
Sbjct: 289 SIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRPENN 333
Score = 146 (56.5 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V FIAEH M+ D +S + EDWKYVA+V+DRLFLWIF L + GT G+ LQ
Sbjct: 409 VSFIAEH--MKSDDNDQSVI----EDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQ 458
>UNIPROTKB|P32297 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IDA;TAS] [GO:0015276 "ligand-gated ion channel
activity" evidence=TAS] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0006811 "ion transport" evidence=NAS]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0042166
"acetylcholine binding" evidence=IC] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0060084 "synaptic transmission
involved in micturition" evidence=IMP] [GO:0035095 "behavioral
response to nicotine" evidence=IMP] [GO:0006940 "regulation of
smooth muscle contraction" evidence=ISS] [GO:0007171 "activation of
transmembrane receptor protein tyrosine kinase activity"
evidence=ISS] [GO:0007271 "synaptic transmission, cholinergic"
evidence=ISS] [GO:0007626 "locomotory behavior" evidence=ISS]
[GO:0014056 "regulation of acetylcholine secretion" evidence=ISS]
[GO:0042391 "regulation of membrane potential" evidence=ISS]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0030425 "dendrite" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0014069 GO:GO:0007507 GO:GO:0042493
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1136
KO:K04805 GO:GO:0060084 OMA:SKGCKEG EMBL:M86383 EMBL:M37981
EMBL:U62432 EMBL:Y08418 EMBL:AJ007783 EMBL:AJ007784 EMBL:AJ007785
EMBL:AJ007786 EMBL:AJ007787 EMBL:BT006646 EMBL:BT006897
EMBL:AC027228 EMBL:AC067863 EMBL:BC000513 EMBL:BC001642
EMBL:BC002996 EMBL:BC006114 EMBL:BC098443 EMBL:AF385584 EMBL:X53559
IPI:IPI00297165 IPI:IPI00852613 IPI:IPI00939562 PIR:A37040
PIR:A53956 RefSeq:NP_000734.2 RefSeq:NP_001160166.1
UniGene:Hs.89605 ProteinModelPortal:P32297 SMR:P32297 STRING:P32297
PhosphoSite:P32297 DMDM:254763435 PRIDE:P32297 DNASU:1136
Ensembl:ENST00000326828 Ensembl:ENST00000348639
Ensembl:ENST00000559658 GeneID:1136 KEGG:hsa:1136 UCSC:uc002beb.3
UCSC:uc002bec.3 GeneCards:GC15M078885 H-InvDB:HIX0017542
HGNC:HGNC:1957 HPA:HPA029430 MIM:118503 MIM:612052
neXtProt:NX_P32297 PharmGKB:PA113 InParanoid:P32297
PhylomeDB:P32297 BindingDB:P32297 ChEMBL:CHEMBL3068 ChiTaRS:CHRNA3
GenomeRNAi:1136 NextBio:4726 ArrayExpress:P32297 Bgee:P32297
CleanEx:HS_CHRNA3 Genevestigator:P32297 GermOnline:ENSG00000080644
GO:GO:0007171 GO:GO:0014056 GO:GO:0006940 GO:GO:0010035
Uniprot:P32297
Length = 505
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 128/304 (42%), Positives = 181/304 (59%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 196 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 255
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 256 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 315
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI +TV VLNVH+R+P TH M WVK VF+ LPR++ M RP N +G+ PL G
Sbjct: 316 TLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTRPTSN-EGNAQKPRPLYG 374
Query: 243 GSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAE 302
+ S E H R S+ S V +
Sbjct: 375 AELSNLNCFSRAE-SKGCKEGYPCQDGMCGYCHHRRIKISNFSANLTRSSSSESVDAVLS 433
Query: 303 HTRMQDD------STK--------ESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAG 348
+ + + S K ++ +++DWKYVA+V+DR+FLW+FTL + GTAG
Sbjct: 434 LSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAG 493
Query: 349 IILQ 352
+ LQ
Sbjct: 494 LFLQ 497
>UNIPROTKB|F1N4T3 [details] [associations]
symbol:CHRNA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 OMA:ACAGHVA
GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804
GeneTree:ENSGT00620000087732 EMBL:DAAA02023847 IPI:IPI00706536
RefSeq:NP_001179639.1 UniGene:Bt.61429 UniGene:Bt.68771
ProteinModelPortal:F1N4T3 Ensembl:ENSBTAT00000002910 GeneID:531838
KEGG:bta:531838 NextBio:20875538 Uniprot:F1N4T3
Length = 506
Score = 474 (171.9 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 91/165 (55%), Positives = 117/165 (70%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y D+T+ +RR LFYT+N+IIPC+ I
Sbjct: 197 VDLKDYWESGEWAIVNATGTYNTKKYDCCAEVYADVTYYFVIRRLPLFYTINLIIPCLLI 256
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+ +YL+F MI V
Sbjct: 257 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLISEYLLFTMIFV 316
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL 227
++SI +TV VLNVH RS TH M WV+ F+ + R L++ RPL
Sbjct: 317 TLSIVITVFVLNVHHRSASTHNMPHWVRVAFLGCVSRWLLISRPL 361
Score = 137 (53.3 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 288 PVMHRSCFCVRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
P + ++ V +IA+H R +D DS+ VKEDW+YVA+V+DR+FLW+F L GT
Sbjct: 441 PRVQKALEGVHYIADHLRAEDADSS-------VKEDWRYVAMVIDRIFLWLFILVCFLGT 493
Query: 347 AGIIL 351
G+ L
Sbjct: 494 VGLFL 498
>FB|FBgn0000038 [details] [associations]
symbol:nAcRbeta-64B "nicotinic Acetylcholine Receptor beta
64B" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014296 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 KO:K05312
GO:GO:0005892 eggNOG:NOG267576 EMBL:X04016 EMBL:X07956 EMBL:X07957
EMBL:X07958 EMBL:M20316 PIR:S03012 RefSeq:NP_523927.2
UniGene:Dm.2738 ProteinModelPortal:P04755 SMR:P04755 STRING:P04755
PRIDE:P04755 GeneID:38545 KEGG:dme:Dmel_CG11348 CTD:38545
FlyBase:FBgn0000038 InParanoid:P04755 OrthoDB:EOG47M0D2
ChiTaRS:nAcRbeta-64B GenomeRNAi:38545 NextBio:809206 Bgee:P04755
GermOnline:CG11348 Uniprot:P04755
Length = 521
Score = 464 (168.4 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 91/165 (55%), Positives = 126/165 (76%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPY-LDITFNITMRRKTLFYTVNIIIPCMG 121
VDLS+++ S WDI+EVPA N + + P DITF I +RRKTLFYTVN+I+P +
Sbjct: 191 VDLSDYWKSGTWDIIEVPAYLNV-YEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVL 249
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMIL 181
ISFL VL FYLP+++GEKVTL ISIL+SL VF LLV +I+PPTSLV+PL+ KYL+F I+
Sbjct: 250 ISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIM 309
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI VTV+++N +FR P+TH+M +++ +F+ +LP L M+RP
Sbjct: 310 NTVSILVTVIIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRP 354
Score = 147 (56.8 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 288 PVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTA 347
P ++ V FIAEH R +D I +EDWKYVA+V+DRL L+IF + GT
Sbjct: 443 PEASKATEAVEFIAEHLRNED------LYIQTREDWKYVAMVIDRLQLYIFFIVTTAGTV 496
Query: 348 GIILQAPSLYD 358
GI++ AP +++
Sbjct: 497 GILMDAPHIFE 507
>UNIPROTKB|F1RGM6 [details] [associations]
symbol:CHRNB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IEA]
[GO:0045759 "negative regulation of action potential" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045188
"regulation of circadian sleep/wake cycle, non-REM sleep"
evidence=IEA] [GO:0042320 "regulation of circadian sleep/wake
cycle, REM sleep" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042113 "B cell activation" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0035095 "behavioral
response to nicotine" evidence=IEA] [GO:0033603 "positive
regulation of dopamine secretion" evidence=IEA] [GO:0032226
"positive regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021771 "lateral geniculate nucleus
development" evidence=IEA] [GO:0021631 "optic nerve morphogenesis"
evidence=IEA] [GO:0021562 "vestibulocochlear nerve development"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001661 "conditioned taste aversion" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0009897 GO:GO:0045471 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0048814
GO:GO:0042166 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
GO:GO:0060084 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899
GO:GO:0007605 GO:GO:0021952 GO:GO:0001661 GO:GO:0021771
GO:GO:0045759 GO:GO:0021631 GO:GO:0032226 GO:GO:0045188
GO:GO:0042320 GO:GO:0042053 GO:GO:0051963 GO:GO:0006939
GO:GO:0035176 GO:GO:0021562 GeneTree:ENSGT00620000087691
OMA:YSEIPLR EMBL:CU469085 Ensembl:ENSSSCT00000007170 Uniprot:F1RGM6
Length = 502
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 136/303 (44%), Positives = 182/303 (60%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 194 LDDFTPSGEWDIVALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCVLITS 250
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 251 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 310
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHL--------- 235
SI +V VLNVH RSP TH MAPWVK VF++ LP +L M++P + L
Sbjct: 311 SIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFMQQPRHRCARQRLRLRRRQRER 370
Query: 236 -ADGPL-----IGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPV 289
G L +G +C ++ H S+ L+ + D + P S C
Sbjct: 371 EGAGALFFREALGADACTCYVN-HASVQG------LAGAFGADPAPVAGPGRSGGPCGCG 423
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ + VRFIA+H R +DD V EDWKYVA+V+DRLFLWIF + GT G+
Sbjct: 424 LREAVDGVRFIADHMRSEDDDQS------VSEDWKYVAMVIDRLFLWIFVFVCVFGTIGM 477
Query: 350 ILQ 352
LQ
Sbjct: 478 FLQ 480
>UNIPROTKB|F1MYI7 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0060084 "synaptic
transmission involved in micturition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0014056 "regulation of acetylcholine secretion"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] [GO:0006940 "regulation of smooth
muscle contraction" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0060084
GO:GO:0007171 GO:GO:0014056 GO:GO:0006940 EMBL:DAAA02052433
IPI:IPI00701547 Ensembl:ENSBTAT00000004070 Uniprot:F1MYI7
Length = 482
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 126/311 (40%), Positives = 182/311 (58%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 173 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 232
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 233 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 292
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI +TV VLNVH+R+P TH M WVK +F+ LPR++ M RP N +G+ P
Sbjct: 293 TLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPASN-EGNTQRPRPFYS 351
Query: 243 GSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAE 302
+ + S + E H R S+ S V +
Sbjct: 352 AELSNLNCFSRIE-SKVCKEGYPCQDGLCGYCHHRRAKISNFSANLTRSSSSESVDAVLS 410
Query: 303 HTRMQDD------STK--------ESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAG 348
+ + + S K ++ +++DWKYVA+V+DR+FLW+F L + GTAG
Sbjct: 411 LSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAG 470
Query: 349 IILQAPSLYDD 359
+ LQ DD
Sbjct: 471 LFLQPLMTRDD 481
>UNIPROTKB|Q07263 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0035095 "behavioral response
to nicotine" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0060084
"synaptic transmission involved in micturition" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007399 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
EMBL:X57032 IPI:IPI00969668 PIR:S60589 RefSeq:NP_777144.1
UniGene:Bt.63828 ProteinModelPortal:Q07263 SMR:Q07263 GeneID:282702
KEGG:bta:282702 CTD:1136 KO:K04805 ChEMBL:CHEMBL5317
NextBio:20806362 GO:GO:0060084 Uniprot:Q07263
Length = 495
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 126/311 (40%), Positives = 182/311 (58%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
++L +++ S EW I++ P +++ Y CC+E Y DIT+++ +RR LFYT+N+IIPC+ I
Sbjct: 186 MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLI 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 246 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG 242
++SI +TV VLNVH+R+P TH M WVK +F+ LPR++ M RP N +G+ P
Sbjct: 306 TLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPASN-EGNTQRPRPFYS 364
Query: 243 GSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAE 302
+ + S + E H R S+ S V +
Sbjct: 365 AELSNLNCFSRIE-SKVCKEGYPCQDGLCGYCHHRRAKISNFSANLTRSSSSESVDAVLS 423
Query: 303 HTRMQDD------STK--------ESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAG 348
+ + + S K ++ +++DWKYVA+V+DR+FLW+F L + GTAG
Sbjct: 424 LSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAG 483
Query: 349 IILQAPSLYDD 359
+ LQ DD
Sbjct: 484 LFLQPLMTRDD 494
>UNIPROTKB|F1NAQ7 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001508 "regulation of action potential"
evidence=IEA] [GO:0006939 "smooth muscle contraction" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0060084
"synaptic transmission involved in micturition" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0015464 GO:GO:0001508
GO:GO:0006940 GO:GO:0035094 GeneTree:ENSGT00620000087691
EMBL:AADN02040457 IPI:IPI00682718 Ensembl:ENSGALT00000004749
OMA:GRRTINP Uniprot:F1NAQ7
Length = 489
Score = 461 (167.3 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 89/165 (53%), Positives = 119/165 (72%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 191 MDDFTPSGEWDIVALPGRRT---VNPLDPNYVDVTYDFIIKRKPLFYTINLIIPCVLITS 247
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 248 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 307
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN 229
SI +V VLNVH RSP TH M PWVK VF++ LP L M+RP N
Sbjct: 308 SIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRPENN 352
Score = 146 (56.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V FIAEH M+ D +S + EDWKYVA+V+DRLFLWIF L + GT G+ LQ
Sbjct: 428 VSFIAEH--MKSDDNDQSVI----EDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQ 477
>UNIPROTKB|F1NWX4 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 EMBL:AADN02040457 IPI:IPI00820288
Ensembl:ENSGALT00000034665 Uniprot:F1NWX4
Length = 470
Score = 461 (167.3 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 89/165 (53%), Positives = 119/165 (72%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 172 MDDFTPSGEWDIVALPGRRT---VNPLDPNYVDVTYDFIIKRKPLFYTINLIIPCVLITS 228
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 229 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 288
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN 229
SI +V VLNVH RSP TH M PWVK VF++ LP L M+RP N
Sbjct: 289 SIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRPENN 333
Score = 146 (56.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V FIAEH M+ D +S + EDWKYVA+V+DRLFLWIF L + GT G+ LQ
Sbjct: 409 VSFIAEH--MKSDDNDQSVI----EDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQ 458
>UNIPROTKB|F1P4U2 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 IPI:IPI00580226 EMBL:AADN02040457
Ensembl:ENSGALT00000039804 Uniprot:F1P4U2
Length = 476
Score = 461 (167.3 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 89/165 (53%), Positives = 119/165 (72%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 178 MDDFTPSGEWDIVALPGRRT---VNPLDPNYVDVTYDFIIKRKPLFYTINLIIPCVLITS 234
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 235 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 294
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN 229
SI +V VLNVH RSP TH M PWVK VF++ LP L M+RP N
Sbjct: 295 SIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRPENN 339
Score = 146 (56.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
V FIAEH M+ D +S + EDWKYVA+V+DRLFLWIF L + GT G+ LQ
Sbjct: 415 VSFIAEH--MKSDDNDQSVI----EDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQ 464
>WB|WBGene00000051 [details] [associations]
symbol:acr-12 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0004889
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:Z68118 EMBL:AF187013
PIR:T23843 RefSeq:NP_510262.1 UniGene:Cel.19447
ProteinModelPortal:G5EDF1 SMR:G5EDF1 EnsemblMetazoa:R01E6.4
GeneID:181475 KEGG:cel:CELE_R01E6.4 CTD:181475 WormBase:R01E6.4
OMA:RYLITTM NextBio:914100 Uniprot:G5EDF1
Length = 573
Score = 471 (170.9 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 88/167 (52%), Positives = 124/167 (74%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFY-TCCD-EPYLDITFNITMRRKTLFYTVNIIIPC 119
G+DLS FY S EWD+L + + R+ Y +CC E Y+DIT+ +RRKTLF+T N+I+PC
Sbjct: 216 GMDLSFFYRSAEWDLLSLTSERHSVLYASCCGPEKYVDITYYFGLRRKTLFFTCNLILPC 275
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
IS LT FYL S K+T SISIL++L VFFL++++++PPTSLV+P+ G+YLI M
Sbjct: 276 FLISILTTFVFYL---SDHKITFSISILVTLTVFFLVLIDLMPPTSLVIPMFGRYLITTM 332
Query: 180 ILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
ILV++S V+V+ +N FRS HKM+PW++ VF++FLP+IL+M RP
Sbjct: 333 ILVALSTVVSVITVNFRFRSGSAHKMSPWIRAVFLKFLPKILLMSRP 379
Score = 134 (52.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
VRFIAEH R ++ E + +DW +VA+VLDRLFL IF++ +G T IIL++PSL
Sbjct: 493 VRFIAEHFR-HNELEGE-----ISDDWTFVAMVLDRLFLIIFSVLNVG-TVFIILESPSL 545
Query: 357 YDDRVPID 364
YD P++
Sbjct: 546 YDYSKPMN 553
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 24 YHTAARSTEDLSRFKRESSRKNKDDLSPRRPP 55
Y TAA++ + ++ ++ KN D +S R P
Sbjct: 401 YATAAKAANE---YRNKAKGKNNDLMSLRGKP 429
>UNIPROTKB|F1MUN1 [details] [associations]
symbol:CHRNB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IEA]
[GO:0045759 "negative regulation of action potential" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045188
"regulation of circadian sleep/wake cycle, non-REM sleep"
evidence=IEA] [GO:0042320 "regulation of circadian sleep/wake
cycle, REM sleep" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042113 "B cell activation" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0035095 "behavioral
response to nicotine" evidence=IEA] [GO:0033603 "positive
regulation of dopamine secretion" evidence=IEA] [GO:0032226
"positive regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021771 "lateral geniculate nucleus
development" evidence=IEA] [GO:0021631 "optic nerve morphogenesis"
evidence=IEA] [GO:0021562 "vestibulocochlear nerve development"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001661 "conditioned taste aversion" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0009897 GO:GO:0045471 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0048814
GO:GO:0042166 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
GO:GO:0060084 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899
GO:GO:0007605 CTD:1141 KO:K04813 GO:GO:0021952 GO:GO:0001661
GO:GO:0021771 GO:GO:0045759 GO:GO:0021631 GO:GO:0032226
GO:GO:0045188 GO:GO:0042320 GO:GO:0042053 GO:GO:0051963
GO:GO:0006939 GO:GO:0035176 GO:GO:0021562
GeneTree:ENSGT00620000087691 EMBL:DAAA02007166 IPI:IPI00726026
RefSeq:NP_001179403.1 UniGene:Bt.13038 ProteinModelPortal:F1MUN1
Ensembl:ENSBTAT00000009892 GeneID:517519 KEGG:bta:517519
OMA:YSEIPLR NextBio:20872458 Uniprot:F1MUN1
Length = 501
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 134/303 (44%), Positives = 181/303 (59%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
+L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 193 NLDDFTPSGEWDIVALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCVLIT 249
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 250 SLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVT 309
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHL-------- 235
SI +V VLNVH RSP TH MAPWVK VF++ LP +L M++P + L
Sbjct: 310 FSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFMQQPRHRCARQRLRLRRRQRE 369
Query: 236 --ADGPL----IGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPV 289
G L +G +C ++ S+ + S P + P + C
Sbjct: 370 REGAGALFREALGADSCTCFVN-RASVQGLA--GAFGSEPAPAAG----PGRARGPCGCG 422
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ + VRFIA+H R +DD V EDWKYVA+V+DRLFLWIF + GT G+
Sbjct: 423 LREAVDGVRFIADHMRSEDDDQS------VSEDWKYVAMVIDRLFLWIFVFVCVFGTIGM 476
Query: 350 ILQ 352
LQ
Sbjct: 477 FLQ 479
>UNIPROTKB|P17787 [details] [associations]
symbol:CHRNB2 "Neuronal acetylcholine receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0032226 "positive regulation of synaptic
transmission, dopaminergic" evidence=IEA] [GO:0045188 "regulation
of circadian sleep/wake cycle, non-REM sleep" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IDA;TAS] [GO:0015276 "ligand-gated ion channel activity"
evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0006811 "ion transport" evidence=NAS] [GO:0007165
"signal transduction" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0035094 "response to nicotine" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0008542
"visual learning" evidence=IMP] [GO:0006939 "smooth muscle
contraction" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0007605 "sensory perception of sound"
evidence=ISS] [GO:0008306 "associative learning" evidence=ISS]
[GO:0014059 "regulation of dopamine secretion" evidence=ISS]
[GO:0019233 "sensory perception of pain" evidence=ISS] [GO:0021562
"vestibulocochlear nerve development" evidence=ISS] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=ISS] [GO:0030890 "positive regulation of B cell
proliferation" evidence=ISS] [GO:0032225 "regulation of synaptic
transmission, dopaminergic" evidence=ISS] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISS] [GO:0042113 "B cell
activation" evidence=ISS] [GO:0042220 "response to cocaine"
evidence=ISS] [GO:0042320 "regulation of circadian sleep/wake
cycle, REM sleep" evidence=ISS] [GO:0045759 "negative regulation of
action potential" evidence=ISS] [GO:0051899 "membrane
depolarization" evidence=ISS] [GO:0051963 "regulation of synapse
assembly" evidence=ISS] [GO:0060084 "synaptic transmission involved
in micturition" evidence=ISS] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISS] [GO:0035095 "behavioral response to
nicotine" evidence=IMP] [GO:0050890 "cognition" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=IC;IMP] [GO:0007613
"memory" evidence=IMP] [GO:0050877 "neurological system process"
evidence=IMP] [GO:0007612 "learning" evidence=IMP] [GO:0006816
"calcium ion transport" evidence=ISS] [GO:0009897 "external side of
plasma membrane" evidence=ISS] [GO:0021771 "lateral geniculate
nucleus development" evidence=ISS] [GO:0035176 "social behavior"
evidence=ISS] [GO:0045471 "response to ethanol" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0021631 "optic
nerve morphogenesis" evidence=ISS] [GO:0042053 "regulation of
dopamine metabolic process" evidence=ISS] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009897 GO:GO:0045471
GO:GO:0042220 GO:GO:0007613 GO:GO:0019233 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603
GO:GO:0007601 GO:GO:0001666 GO:GO:0008542 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 DrugBank:DB00184 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0015464 Orphanet:98784 GO:GO:0060084 GO:GO:0042113
GO:GO:0006816 GO:GO:0051899 PDB:2GVT PDBsum:2GVT GO:GO:0032225
GO:GO:0007605 CTD:1141 KO:K04813 EMBL:X53179 EMBL:U62437
EMBL:Y08415 EMBL:AJ001935 EMBL:AJ001936 EMBL:AJ001937 EMBL:AJ001938
EMBL:AJ001939 EMBL:AF077186 EMBL:BC075040 EMBL:BC075041
IPI:IPI00016869 PIR:S10505 RefSeq:NP_000739.1 UniGene:Hs.2306
PDB:2K58 PDB:2K59 PDB:2KSR PDB:2LM2 PDBsum:2K58 PDBsum:2K59
PDBsum:2KSR PDBsum:2LM2 ProteinModelPortal:P17787 SMR:P17787
STRING:P17787 DMDM:113105 PRIDE:P17787 Ensembl:ENST00000368476
GeneID:1141 KEGG:hsa:1141 UCSC:uc001ffg.3 GeneCards:GC01P154540
HGNC:HGNC:1962 MIM:118507 MIM:605375 neXtProt:NX_P17787
PharmGKB:PA115 HOGENOM:HOG000006757 InParanoid:P17787 OMA:PRQNCAR
OrthoDB:EOG4HQDJ4 PhylomeDB:P17787 BindingDB:P17787
ChEMBL:CHEMBL1883 EvolutionaryTrace:P17787 GenomeRNAi:1141
NextBio:4748 ArrayExpress:P17787 Bgee:P17787 CleanEx:HS_CHRNB2
Genevestigator:P17787 GermOnline:ENSG00000160716 GO:GO:0021952
GO:GO:0001661 GO:GO:0021771 GO:GO:0045759 GO:GO:0021631
GO:GO:0030890 GO:GO:0032226 GO:GO:0045188 GO:GO:0042320
GO:GO:0042053 GO:GO:0051963 GO:GO:0006939 GO:GO:0035176
GO:GO:0021562 Uniprot:P17787
Length = 502
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 134/296 (45%), Positives = 181/296 (61%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 194 LDDFTPSGEWDIVALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCVLITS 250
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 251 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 310
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLA---DGPLI 241
SI +V VLNVH RSP TH MAPWVK VF++ LP +L M++P ++ L
Sbjct: 311 SIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPALLFMQQPRHHCARQRLRLRRRQRER 370
Query: 242 GGSGGSC--KIHGHVSLSNILTEAI---LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFC 296
G+G + G S + + A L+ + + + P S C + +
Sbjct: 371 EGAGALFFREAPGADSCTCFVNRASVQGLAGAFGAEPAPVAGPGRSGEPCGCGLREAVDG 430
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
VRFIA+H R +DD V EDWKYVA+V+DRLFLWIF + GT G+ LQ
Sbjct: 431 VRFIADHMRSEDDDQS------VSEDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 480
>RGD|2350 [details] [associations]
symbol:Chrnb2 "cholinergic receptor, nicotinic, beta 2 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001661 "conditioned taste aversion"
evidence=IEA;ISO] [GO:0001666 "response to hypoxia" evidence=IEA;ISO]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IC;ISO;IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISO;IDA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0006816 "calcium ion transport" evidence=IEA;ISO] [GO:0006939
"smooth muscle contraction" evidence=IEA;ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IMP] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0007612 "learning" evidence=ISO] [GO:0007613
"memory" evidence=IEA;ISO] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008306 "associative learning" evidence=ISO] [GO:0008542 "visual
learning" evidence=IEA;ISO] [GO:0009897 "external side of plasma
membrane" evidence=IEA;ISO] [GO:0014059 "regulation of dopamine
secretion" evidence=ISO] [GO:0015464 "acetylcholine receptor
activity" evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0019233 "sensory perception of pain" evidence=IEA;ISO]
[GO:0021562 "vestibulocochlear nerve development" evidence=IEA;ISO]
[GO:0021631 "optic nerve morphogenesis" evidence=IEA;ISO] [GO:0021771
"lateral geniculate nucleus development" evidence=IEA;ISO]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IEA;ISO] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030890 "positive regulation of B cell proliferation"
evidence=ISO] [GO:0032225 "regulation of synaptic transmission,
dopaminergic" evidence=ISO] [GO:0032226 "positive regulation of
synaptic transmission, dopaminergic" evidence=IEA;ISO] [GO:0033603
"positive regulation of dopamine secretion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035094
"response to nicotine" evidence=ISO;IMP] [GO:0035095 "behavioral
response to nicotine" evidence=IEA;ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA;ISO] [GO:0042113 "B cell activation"
evidence=IEA;ISO] [GO:0042166 "acetylcholine binding"
evidence=ISO;IDA] [GO:0042220 "response to cocaine" evidence=IEA;ISO]
[GO:0042320 "regulation of circadian sleep/wake cycle, REM sleep"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045188 "regulation of circadian sleep/wake cycle,
non-REM sleep" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA;ISO]
[GO:0045759 "negative regulation of action potential"
evidence=IEA;ISO] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA;ISO] [GO:0050877 "neurological system process"
evidence=ISO] [GO:0050890 "cognition" evidence=ISO] [GO:0051291
"protein heterooligomerization" evidence=IDA] [GO:0051899 "membrane
depolarization" evidence=IEA;ISO] [GO:0051963 "regulation of synapse
assembly" evidence=IEA;ISO] [GO:0060084 "synaptic transmission
involved in micturition" evidence=IEA;ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2350 GO:GO:0009897 GO:GO:0045471
GO:GO:0042220 GO:GO:0007613 GO:GO:0019233 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0007271 GO:GO:0048814
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206
GO:GO:0005892 GO:GO:0015464 GO:GO:0060084 PDB:1OLF PDBsum:1OLF
GO:GO:0035094 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899 PDB:1OLE
PDBsum:1OLE GO:GO:0007605 CTD:1141 KO:K04813 HOGENOM:HOG000006757
OMA:PRQNCAR OrthoDB:EOG4HQDJ4 GO:GO:0021952 GO:GO:0001661
GO:GO:0021771 GO:GO:0045759 GO:GO:0021631 GO:GO:0032226 GO:GO:0045188
GO:GO:0042320 GO:GO:0042053 GO:GO:0051963 GO:GO:0006939 GO:GO:0035176
GO:GO:0021562 EMBL:L31622 EMBL:AY574258 IPI:IPI00196738 PIR:JH0174
RefSeq:NP_062170.1 UniGene:Rn.53978 ProteinModelPortal:P12390
SMR:P12390 STRING:P12390 PRIDE:P12390 Ensembl:ENSRNOT00000028200
GeneID:54239 KEGG:rno:54239 UCSC:RGD:2350
GeneTree:ENSGT00620000087691 InParanoid:P12390 BindingDB:P12390
ChEMBL:CHEMBL3001 NextBio:610692 Genevestigator:P12390
GermOnline:ENSRNOG00000020778 Uniprot:P12390
Length = 500
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 133/295 (45%), Positives = 178/295 (60%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 193 LDDFTPSGEWDIIALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCVLITS 249
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 250 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 309
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLA-DGPLIGG 243
SI +V VLNVH RSP TH MAPWVK VF++ LP +L +++P + L
Sbjct: 310 SIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFLQQPRHRCARQRLRLRRRQRER 369
Query: 244 SGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLR--P----PAFSHAQCPPVMHRSCFCV 297
G ++ T + +S Q + R P P S C + + V
Sbjct: 370 EGAGALFFREGPAADPCTCFVNPASVQGLAGAFRAEPTAAGPGRSVGPCSCGLREAVDGV 429
Query: 298 RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
RFIA+H R +DD V+EDWKYVA+V+DRLFLWIF + GT G+ LQ
Sbjct: 430 RFIADHMRSEDDDQS------VREDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQ 478
>UNIPROTKB|P09484 [details] [associations]
symbol:CHRNB2 "Neuronal acetylcholine receptor subunit
beta-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG290206 EMBL:X07353 EMBL:X07400 EMBL:X07354 EMBL:X07355
EMBL:X07356 EMBL:X07357 EMBL:AJ250362 EMBL:X53092 IPI:IPI00594894
PIR:S00380 RefSeq:NP_990144.1 UniGene:Gga.336
ProteinModelPortal:P09484 SMR:P09484 GeneID:395605 KEGG:gga:395605
CTD:1141 KO:K04813 ChEMBL:CHEMBL5195 NextBio:20815678
Uniprot:P09484
Length = 491
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 133/299 (44%), Positives = 180/299 (60%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L +F S EWDI+ +P RNE D Y+DIT++ +RRK LFYT+N+IIPC+ I+
Sbjct: 187 LDDFTPSGEWDIVALPGRRNEN---PDDSTYVDITYDFIIRRKPLFYTINLIIPCILITS 243
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 244 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTF 303
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHL--------- 235
SI +V VLNVH RSP TH M PWV+ +F++ LP +L M++P N L
Sbjct: 304 SIVTSVCVLNVHHRSPTTHTMPPWVRTLFLRKLPALLFMKQPQQNCARQRLRQRRQTQER 363
Query: 236 -ADGPLIGGSGG-SCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRS 293
A L +G +C + + + E L+ + + PPA C + +
Sbjct: 364 AAAATLFLRAGARACACYANPGAAK--AEG-LNGYRERQGQGPDPPA----PCGCGLEEA 416
Query: 294 CFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQ 352
VRFIA+H R +DD V EDWKYVA+V+DRLFLWIF + GT G+ LQ
Sbjct: 417 VEGVRFIADHMRSEDDDQS------VSEDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQ 469
>UNIPROTKB|F1RKU7 [details] [associations]
symbol:CHRNB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007626
GO:GO:0004889 GO:GO:0015464 GO:GO:0001508 GO:GO:0060084
GO:GO:0006940 GO:GO:0006939 GeneTree:ENSGT00620000087691
OMA:TPTASMD EMBL:CT967296 Ensembl:ENSSSCT00000001959 Uniprot:F1RKU7
Length = 495
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 131/311 (42%), Positives = 187/311 (60%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 192 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITS 248
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 249 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 308
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGS-HLADGPLIGG 243
SI +V VLNVH RSP TH MAPWVKR F+ LP L M+RP +P + + LI
Sbjct: 309 SIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKRPDGSPSRAPRPSQARLIKS 368
Query: 244 -SGGSCKIHGHVSLSNILTEAIL-----SSSPQDDS-KHLR--PPAF---SHAQCPPVMH 291
+ + G S SN+ ++ S++P+ + + P F S + +
Sbjct: 369 EAAATASALGPASSSNLYGNSMYFVNPASAAPKSPAGSDVAGIPRDFRLRSSGRFHQDVQ 428
Query: 292 RSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
+ V FIA+H M+ D +S + EDWKYVA+V+DRLFLW+F + + GT G+ L
Sbjct: 429 EALEGVSFIAQH--MKSDDQDQSVI----EDWKYVAMVVDRLFLWVFVVVCVLGTVGLFL 482
Query: 352 QAPSLYDDRVP 362
P L+ P
Sbjct: 483 --PPLFQTHTP 491
>UNIPROTKB|Q8SPU6 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206
HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4 EMBL:AF487465
IPI:IPI00690689 RefSeq:NP_776942.1 UniGene:Bt.9978
ProteinModelPortal:Q8SPU6 SMR:Q8SPU6 PRIDE:Q8SPU6 GeneID:282181
KEGG:bta:282181 CTD:1143 InParanoid:Q8SPU6 KO:K04815
ChEMBL:CHEMBL5238 NextBio:20806009 Uniprot:Q8SPU6
Length = 496
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 134/314 (42%), Positives = 184/314 (58%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 192 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITS 248
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 249 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLNVPLIGKYLMFTMVLVTF 308
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDG---SHLA----- 236
SI +V VLNVH RSP TH MAPWVKR F+ LP L ++RP P S LA
Sbjct: 309 SIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFIKRPRQQPSRAPQSSLARLTKS 368
Query: 237 ----DGPLIGGSGGSCKIHGHVSLSNILTEAILSSSP-QDDSKHLRPPAF---SHAQCPP 288
L G S ++G+ S+ + SP DS + P F S +
Sbjct: 369 EATTTTTLAMGPTSSSNLYGN-SMYFVNPGLAAPKSPVASDSAGI-PRDFRLRSSGRFRQ 426
Query: 289 VMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAG 348
+ + V FIA+H M+ D +S + EDWKYVA+V+DRLFLW+F + + GT G
Sbjct: 427 DVQEALEGVSFIAQH--MKSDDLDQSVI----EDWKYVAMVVDRLFLWVFVVVCVLGTVG 480
Query: 349 IILQAPSLYDDRVP 362
+ L P L+ P
Sbjct: 481 LFL--PPLFQTHTP 492
>UNIPROTKB|P30926 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0001508 "regulation of action potential"
evidence=IEA] [GO:0006939 "smooth muscle contraction" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=TAS] [GO:0015276 "ligand-gated ion channel activity"
evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA;TAS] [GO:0006811 "ion transport" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0046928
"regulation of neurotransmitter secretion" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=IC] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0060084 "synaptic
transmission involved in micturition" evidence=IMP] [GO:0007271
"synaptic transmission, cholinergic" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0046928 GO:GO:0007626
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 GO:GO:0001508
GO:GO:0060084 GO:GO:0006940 HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4
GO:GO:0006939 CTD:1143 KO:K04815 EMBL:U62439 EMBL:U48861
EMBL:Y08416 EMBL:AJ306454 EMBL:AJ306455 EMBL:AJ306456 EMBL:AJ306457
EMBL:AJ306458 EMBL:AJ306459 EMBL:AF306329 EMBL:AF306325
EMBL:AF306326 EMBL:AF306327 EMBL:AF306328 EMBL:BC096080
EMBL:BC096082 EMBL:AF453877 EMBL:X68275 IPI:IPI00028080 PIR:G02421
RefSeq:NP_000741.1 RefSeq:NP_001243496.1 UniGene:Hs.624178 PDB:2ASG
PDBsum:2ASG ProteinModelPortal:P30926 SMR:P30926 STRING:P30926
PhosphoSite:P30926 DMDM:2506129 PRIDE:P30926
Ensembl:ENST00000261751 GeneID:1143 KEGG:hsa:1143 UCSC:uc002bed.1
GeneCards:GC15M078916 HGNC:HGNC:1964 MIM:118509 neXtProt:NX_P30926
PharmGKB:PA26496 InParanoid:P30926 OMA:TPTASMD PhylomeDB:P30926
BindingDB:P30926 ChEMBL:CHEMBL3002 GenomeRNAi:1143 NextBio:4756
ArrayExpress:P30926 Bgee:P30926 CleanEx:HS_CHRNB4
Genevestigator:P30926 GermOnline:ENSG00000117971 Uniprot:P30926
Length = 498
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 129/315 (40%), Positives = 181/315 (57%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ +
Sbjct: 192 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLTTL 248
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L F LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 249 LAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 308
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP--------LYNPDGSHLA 236
SI +V VLNVH RSP TH MAPWVKR F+ LP L M+RP + P S +
Sbjct: 309 SIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKRPGPDSSPARAFPPSKSCVT 368
Query: 237 DGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAF---SHAQCPPVMHRS 293
S +G+ S+ + + S SP + P F S + + +
Sbjct: 369 KPEATATSTSPSNFYGN-SMYFVNPASAASKSPAGSTPVAIPRDFWLRSSGRFRQDVQEA 427
Query: 294 CFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
V FIA+H M++D +S V EDWKYVA+V+DRLFLW+F + GT G+ L
Sbjct: 428 LEGVSFIAQH--MKNDDEDQS----VVEDWKYVAMVVDRLFLWVFMFVCVLGTVGLFL-- 479
Query: 354 PSLYDDRVPIDSKFA 368
P L+ + +A
Sbjct: 480 PPLFQTHAASEGPYA 494
>UNIPROTKB|F1MC93 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9913 "Bos taurus" [GO:0060084 "synaptic
transmission involved in micturition" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0006940 "regulation of
smooth muscle contraction" evidence=IEA] [GO:0006939 "smooth muscle
contraction" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007626 GO:GO:0004889 GO:GO:0015464
GO:GO:0001508 GO:GO:0060084 GO:GO:0006940 GO:GO:0006939
GeneTree:ENSGT00620000087691 IPI:IPI00690689 OMA:TPTASMD
EMBL:DAAA02052434 Ensembl:ENSBTAT00000052576 Uniprot:F1MC93
Length = 495
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 134/313 (42%), Positives = 183/313 (58%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 192 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITS 248
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 249 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLNVPLIGKYLMFTMVLVTF 308
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN---PDGS--HLADGP 239
SI +V VLNVH RSP TH MAPWVKR F+ LP L M+RP P S L
Sbjct: 309 SIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKRPQQPSRAPQSSLARLTKSE 368
Query: 240 ------LIGGSGGSCKIHGHVSLSNILTEAILSSSP-QDDSKHLRPPAF---SHAQCPPV 289
L G S ++G+ S+ + SP DS + P F S +
Sbjct: 369 ATTTTTLAMGPTSSSNLYGN-SMYFVNPGLAAPKSPVASDSAGI-PRDFRLRSSGRFRQD 426
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ + V FIA+H M+ D +S + EDWKYVA+V+DRLFLW+F + + GT G+
Sbjct: 427 VQEALEGVSFIAQH--MKSDDLDQSVI----EDWKYVAMVVDRLFLWVFVVVCVLGTVGL 480
Query: 350 ILQAPSLYDDRVP 362
L P L+ P
Sbjct: 481 FL--PPLFQTHTP 491
>RGD|621544 [details] [associations]
symbol:Chrnb3 "cholinergic receptor, nicotinic, beta 3
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IC] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA;TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051291 "protein
heterooligomerization" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:621544 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892
GeneTree:ENSGT00620000087732 CTD:1142 eggNOG:NOG252943 KO:K04814
OrthoDB:EOG40VVPK OMA:INENVDR EMBL:J04636 IPI:IPI00196741
PIR:A33523 RefSeq:NP_598281.1 UniGene:Rn.9694
ProteinModelPortal:P12391 SMR:P12391 STRING:P12391
PhosphoSite:P12391 Ensembl:ENSRNOT00000016656 GeneID:171131
KEGG:rno:171131 UCSC:RGD:621544 InParanoid:P12391 BindingDB:P12391
ChEMBL:CHEMBL4568 NextBio:621898 ArrayExpress:P12391
Genevestigator:P12391 GermOnline:ENSRNOG00000012448 Uniprot:P12391
Length = 464
Score = 456 (165.6 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 98/194 (50%), Positives = 133/194 (68%)
Query: 63 VDLSEFYMSVEWDILEVPAV---RNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPC 119
VD +F+ + EW+IL + R E FY+ P+ +T++ +RR LFYT+ +IIPC
Sbjct: 196 VDRKDFFDNGEWEILNAKGMKGNRREGFYSY---PF--VTYSFVLRRLPLFYTLFLIIPC 250
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
+G+SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F M
Sbjct: 251 LGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIM 310
Query: 180 ILVSISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMRRPLYN---PDGSHL 235
I V++SI VTV V+NVH RS T H MAPWVKR+F+Q LPR L M+ P+ PDG
Sbjct: 311 IFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQRLPRWLCMKDPMDRFSFPDGKE- 369
Query: 236 ADGPLIGGSGGSCK 249
+D + G G K
Sbjct: 370 SDTAVRGKVSGKRK 383
Score = 112 (44.5 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLA-VLGGTAGIILQAPS 355
+R+I+ H + KE + V +DWK+VA VLDR+FLW+F +A VLG I++ P+
Sbjct: 405 IRYISRHVK------KEHFISQVVQDWKFVAQVLDRIFLWLFLIASVLGS---ILIFIPA 455
Query: 356 L 356
L
Sbjct: 456 L 456
>UNIPROTKB|F8WFN5 [details] [associations]
symbol:Chrnb3 "Neuronal acetylcholine receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236 RGD:621544
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 IPI:IPI00475542 Ensembl:ENSRNOT00000016764
Uniprot:F8WFN5
Length = 449
Score = 456 (165.6 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 98/194 (50%), Positives = 133/194 (68%)
Query: 63 VDLSEFYMSVEWDILEVPAV---RNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPC 119
VD +F+ + EW+IL + R E FY+ P+ +T++ +RR LFYT+ +IIPC
Sbjct: 181 VDRKDFFDNGEWEILNAKGMKGNRREGFYSY---PF--VTYSFVLRRLPLFYTLFLIIPC 235
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
+G+SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F M
Sbjct: 236 LGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIM 295
Query: 180 ILVSISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMRRPLYN---PDGSHL 235
I V++SI VTV V+NVH RS T H MAPWVKR+F+Q LPR L M+ P+ PDG
Sbjct: 296 IFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQRLPRWLCMKDPMDRFSFPDGKE- 354
Query: 236 ADGPLIGGSGGSCK 249
+D + G G K
Sbjct: 355 SDTAVRGKVSGKRK 368
Score = 112 (44.5 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLA-VLGGTAGIILQAPS 355
+R+I+ H + KE + V +DWK+VA VLDR+FLW+F +A VLG I++ P+
Sbjct: 390 IRYISRHVK------KEHFISQVVQDWKFVAQVLDRIFLWLFLIASVLGS---ILIFIPA 440
Query: 356 L 356
L
Sbjct: 441 L 441
>RGD|69277 [details] [associations]
symbol:Chrna1 "cholinergic receptor, nicotinic, alpha 1 (muscle)"
species:10116 "Rattus norvegicus" [GO:0003009 "skeletal muscle
contraction" evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005892 "acetylcholine-gated
channel complex" evidence=ISO;TAS] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA;ISO] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA;ISO] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IEA;ISO] [GO:0042391 "regulation of
membrane potential" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046716 "muscle cell homeostasis"
evidence=IEA;ISO] [GO:0048630 "skeletal muscle tissue growth"
evidence=IEA;ISO] [GO:0050881 "musculoskeletal movement"
evidence=ISO] [GO:0050905 "neuromuscular process" evidence=IEA;ISO]
[GO:0070050 "neuron homeostasis" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:69277
GO:GO:0009986 GO:GO:0070050 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007528 GO:GO:0007274 GO:GO:0031594
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 GO:GO:0005892 GO:GO:0015464
GO:GO:0019228 CTD:1134 eggNOG:NOG314424 KO:K04803 OMA:HREIVQV
OrthoDB:EOG4KSPJW GO:GO:0046716 GO:GO:0050905 GO:GO:0003009
GO:GO:0048630 EMBL:X74832 IPI:IPI00215164 PIR:S13872
RefSeq:NP_077811.1 UniGene:Rn.44633 ProteinModelPortal:P25108
SMR:P25108 STRING:P25108 PhosphoSite:P25108
Ensembl:ENSRNOT00000024706 GeneID:79557 KEGG:rno:79557
UCSC:RGD:69277 InParanoid:P25108 BindingDB:P25108 ChEMBL:CHEMBL3599
NextBio:614834 Genevestigator:P25108 GermOnline:ENSRNOG00000018286
Uniprot:P25108
Length = 457
Score = 474 (171.9 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 91/167 (54%), Positives = 121/167 (72%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ FY+CC + PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKEARGWKHWVFYSCCPNTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 246 SFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 306 IASIIITVIVINTHHRSPSTHIMPEWVRKVFIDTIPNIMFFSTMKRP 352
Score = 92 (37.4 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + V++IAE + +S S
Sbjct: 361 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGVKYIAETMKSDQESNNAS 416
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L L GT +
Sbjct: 417 ------EEWKYVAMVMDHILLGVFMLVCLIGTLAV 445
>RGD|2347 [details] [associations]
symbol:Chrna5 "cholinergic receptor, nicotinic, alpha 5 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA;ISO]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0035094 "response to nicotine" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2347 GO:GO:0005886
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0043025 GO:GO:0030425 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0015464
eggNOG:NOG267611 OrthoDB:EOG41JZC6 EMBL:J05231 IPI:IPI00325218
PIR:A35721 UniGene:Rn.40125 ProteinModelPortal:P20420 SMR:P20420
STRING:P20420 PRIDE:P20420 UCSC:RGD:2347 InParanoid:P20420
BindingDB:P20420 ChEMBL:CHEMBL4960 ArrayExpress:P20420
Genevestigator:P20420 GermOnline:ENSRNOG00000013610 Uniprot:P20420
Length = 452
Score = 439 (159.6 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 80/163 (49%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD ++F+ + EW+I+ + + +CC PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 192 VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPY--ITYSFVIKRLPLFYTLFLIIPCIGL 249
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTV+ FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 250 SFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 309
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 310 TLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 352
Score = 124 (48.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPS 355
C+R+I H KE+ + V EDWK++A VLDR+FLW F L + GT G+ + P
Sbjct: 383 CIRYITRHV------VKENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGTLGLFV--PV 434
Query: 356 LY 357
+Y
Sbjct: 435 IY 436
>UNIPROTKB|G3V9X4 [details] [associations]
symbol:Chrna5 "Neuronal acetylcholine receptor subunit
alpha-5" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2347 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1138 KO:K04807 UniGene:Rn.40125
EMBL:CH473975 RefSeq:NP_058774.2 ProteinModelPortal:G3V9X4
Ensembl:ENSRNOT00000065771 GeneID:25102 KEGG:rno:25102
Uniprot:G3V9X4
Length = 467
Score = 439 (159.6 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 80/163 (49%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD ++F+ + EW+I+ + + +CC PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 207 VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPY--ITYSFVIKRLPLFYTLFLIIPCIGL 264
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTV+ FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 265 SFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 324
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 325 TLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 367
Score = 124 (48.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPS 355
C+R+I H KE+ + V EDWK++A VLDR+FLW F L + GT G+ + P
Sbjct: 398 CIRYITRHV------VKENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGTLGLFV--PV 449
Query: 356 LY 357
+Y
Sbjct: 450 IY 451
>UNIPROTKB|Q6PW50 [details] [associations]
symbol:Chrna5 "Neuronal acetylcholine receptor subunit
alpha-5" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2347 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 OMA:WANILIP UniGene:Rn.40125
EMBL:AY574255 IPI:IPI00951199 SMR:Q6PW50 STRING:Q6PW50
Ensembl:ENSRNOT00000018241 InParanoid:Q6PW50 Genevestigator:Q6PW50
Uniprot:Q6PW50
Length = 452
Score = 439 (159.6 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 80/163 (49%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD ++F+ + EW+I+ + + +CC PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 192 VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPY--ITYSFVIKRLPLFYTLFLIIPCIGL 249
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTV+ FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 250 SFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 309
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 310 TLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 352
Score = 124 (48.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPS 355
C+R+I H KE+ + V EDWK++A VLDR+FLW F L + GT G+ + P
Sbjct: 383 CIRYITRHV------VKENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGTLGLFV--PV 434
Query: 356 LY 357
+Y
Sbjct: 435 IY 436
>MGI|MGI:87885 [details] [associations]
symbol:Chrna1 "cholinergic receptor, nicotinic, alpha
polypeptide 1 (muscle)" species:10090 "Mus musculus" [GO:0003009
"skeletal muscle contraction" evidence=ISO] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IPI]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0007274 "neuromuscular synaptic transmission" evidence=ISO]
[GO:0007528 "neuromuscular junction development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=ISO;IDA] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0042166 "acetylcholine
binding" evidence=IGI] [GO:0042391 "regulation of membrane
potential" evidence=ISO;IGI] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0046716
"muscle cell homeostasis" evidence=ISO] [GO:0048630 "skeletal
muscle tissue growth" evidence=ISO] [GO:0050881 "musculoskeletal
movement" evidence=ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0070050 "neuron homeostasis" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87885
GO:GO:0009986 GO:GO:0070050 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007528 GO:GO:0007274
GO:GO:0031594 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0019228 CTD:1134
eggNOG:NOG314424 KO:K04803 OMA:HREIVQV OrthoDB:EOG4KSPJW
GO:GO:0046716 GO:GO:0050905 GO:GO:0003009 GO:GO:0048630 EMBL:X03986
EMBL:M17640 EMBL:AK029177 IPI:IPI00321126 PIR:A24383 PIR:I49458
RefSeq:NP_031415.2 UniGene:Mm.4583 PDB:2QC1 PDBsum:2QC1
ProteinModelPortal:P04756 SMR:P04756 DIP:DIP-59594N STRING:P04756
PhosphoSite:P04756 PRIDE:P04756 Ensembl:ENSMUST00000028515
GeneID:11435 KEGG:mmu:11435 InParanoid:P04756 BindingDB:P04756
ChEMBL:CHEMBL2449 EvolutionaryTrace:P04756 NextBio:278732
Bgee:P04756 Genevestigator:P04756 GermOnline:ENSMUSG00000027107
Uniprot:P04756
Length = 457
Score = 472 (171.2 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 91/167 (54%), Positives = 120/167 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ FY+CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKEARGWKHWVFYSCCPTTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 246 SFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 306 IASIIITVIVINTHHRSPSTHIMPEWVRKVFIDTIPNIMFFSTMKRP 352
Score = 89 (36.4 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 28/95 (29%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + V++IAE + +S +
Sbjct: 361 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGVKYIAETMKSDQESNNAA 416
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L L GT +
Sbjct: 417 ------EEWKYVAMVMDHILLGVFMLVCLIGTLAV 445
>MGI|MGI:106212 [details] [associations]
symbol:Chrnb3 "cholinergic receptor, nicotinic, beta
polypeptide 3" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:106212 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892
GeneTree:ENSGT00620000087732 CTD:1142 eggNOG:NOG252943 KO:K04814
OrthoDB:EOG40VVPK OMA:INENVDR EMBL:AF467896 EMBL:AY574268
EMBL:AK017571 EMBL:AK030464 EMBL:BC058193 IPI:IPI00263112
IPI:IPI00309012 RefSeq:NP_081730.1 RefSeq:NP_775304.1
UniGene:Mm.110444 ProteinModelPortal:Q8BMN3 SMR:Q8BMN3
STRING:Q8BMN3 PhosphoSite:Q8BMN3 PRIDE:Q8BMN3
Ensembl:ENSMUST00000060943 Ensembl:ENSMUST00000079463 GeneID:108043
KEGG:mmu:108043 UCSC:uc009lit.2 UCSC:uc009liu.2 InParanoid:Q8BMN3
BindingDB:Q8BMN3 ChEMBL:CHEMBL1781863 ChiTaRS:CHRNB3 NextBio:359931
Bgee:Q8BMN3 Genevestigator:Q8BMN3 GermOnline:ENSMUSG00000031492
Uniprot:Q8BMN3
Length = 464
Score = 449 (163.1 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 97/194 (50%), Positives = 133/194 (68%)
Query: 63 VDLSEFYMSVEWDILEVPAV---RNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPC 119
VD +F+ + EW+IL + R E FY+ P+ +T++ +RR LFYT+ +IIPC
Sbjct: 196 VDRKDFFDNGEWEILNAKGMKGNRREGFYSY---PF--VTYSFVLRRLPLFYTLFLIIPC 250
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
+G+SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F M
Sbjct: 251 LGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIM 310
Query: 180 ILVSISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMRRPLYN---PDGSHL 235
I V++SI VTV V+NVH RS T H MAPWVKR+F++ LPR L M+ P PDG+
Sbjct: 311 IFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLEKLPRWLCMKDPRDRFSFPDGTE- 369
Query: 236 ADGPLIGGSGGSCK 249
+ G + G G K
Sbjct: 370 SKGTVRGKFPGKKK 383
Score = 111 (44.1 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF-TLAVLGGTAGIILQAPS 355
+R+I+ H + KE + V +DWK+VA VLDR+FLW+F T +VLG +++ P+
Sbjct: 405 IRYISRHVK------KEHFISQVVQDWKFVAQVLDRIFLWLFLTASVLGS---VLIFIPA 455
Query: 356 L 356
L
Sbjct: 456 L 456
>WB|WBGene00000047 [details] [associations]
symbol:acr-8 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HSSP:P02711
GO:GO:0004889 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
KO:K05312 EMBL:Z50029 PIR:T27619 RefSeq:NP_509745.2
ProteinModelPortal:Q23355 SMR:Q23355 MINT:MINT-3383737
STRING:Q23355 EnsemblMetazoa:ZC504.2 GeneID:181246
KEGG:cel:CELE_ZC504.2 UCSC:ZC504.2 CTD:181246 WormBase:ZC504.2
eggNOG:NOG268048 InParanoid:Q23355 OMA:DFYIDIT NextBio:913080
Uniprot:Q23355
Length = 537
Score = 430 (156.4 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 83/171 (48%), Positives = 122/171 (71%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYT-CCDEP-YLDITFNITMRRKTLFYTVNIIIPCMGI 122
+S F+ S+EWD++E+ + R+EK Y CC + Y+DITF I +RRKTLFYT+N++IPC
Sbjct: 205 ISFFFRSLEWDLMELNSARHEKIYAGCCGQDFYIDITFKIEIRRKTLFYTINLMIPCTMF 264
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
+ LT + FY+P K+T SISIL++L VF+L++++++PPTSLV+PL+GKYL+F M LV
Sbjct: 265 AILTSIVFYVPPIE-HKMTFSISILVTLTVFYLILIDLVPPTSLVIPLIGKYLLFTMFLV 323
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGS 233
SISI ++V+ LN + R + M W+K VFI LPR + ++ DGS
Sbjct: 324 SISIMLSVISLNFYRRDGSSFPMPHWMKVVFIHTLPRYICIKTA-EEDDGS 373
Score = 128 (50.1 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
V FIAE+ +S K+ V EDW YVA V+DR+FL IF++ + GT I+L +P+L
Sbjct: 427 VEFIAEYF----NSLKKED--KVSEDWSYVANVIDRIFLIIFSIMNVVGTWVILLNSPAL 480
Query: 357 YDDRVPI 363
+D+R P+
Sbjct: 481 FDNRTPL 487
>MGI|MGI:87892 [details] [associations]
symbol:Chrnb4 "cholinergic receptor, nicotinic, beta
polypeptide 4" species:10090 "Mus musculus" [GO:0001508 "regulation
of action potential" evidence=IGI] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006939 "smooth muscle contraction" evidence=IGI]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IMP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0008144 "drug binding"
evidence=ISO] [GO:0015464 "acetylcholine receptor activity"
evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0035094 "response to nicotine" evidence=IGI]
[GO:0035095 "behavioral response to nicotine" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=ISO]
[GO:0060084 "synaptic transmission involved in micturition"
evidence=ISO;IGI;IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:87892 GO:GO:0005886 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007626
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206
GO:GO:0005892 GO:GO:0015464 GO:GO:0001508 GO:GO:0060084
GO:GO:0006940 HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4 GO:GO:0006939
GeneTree:ENSGT00620000087691 CTD:1143 KO:K04815 OMA:TPTASMD
EMBL:AF492840 EMBL:AY574269 EMBL:AF325351 IPI:IPI00321844
RefSeq:NP_683746.1 UniGene:Mm.32694 ProteinModelPortal:Q8R493
SMR:Q8R493 STRING:Q8R493 PhosphoSite:Q8R493 PRIDE:Q8R493
DNASU:108015 Ensembl:ENSMUST00000034854 GeneID:108015
KEGG:mmu:108015 InParanoid:Q8R493 BindingDB:Q8R493
ChEMBL:CHEMBL1255157 NextBio:359889 Bgee:Q8R493
Genevestigator:Q8R493 GermOnline:ENSMUSG00000035200 Uniprot:Q8R493
Length = 495
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 126/312 (40%), Positives = 180/312 (57%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 191 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITS 247
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L F LL+ +I+PPTSL +PL+GKYL+F M+LV+
Sbjct: 248 LAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTF 307
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGS---HLADGPLI 241
SI TV VLNVH RSP TH MA WVK F+ LP L M+RP + H + L
Sbjct: 308 SIVTTVCVLNVHHRSPSTHTMASWVKECFLHKLPTFLFMKRPGLEVSPARVPHSSQLHLT 367
Query: 242 GGSGGSCKIHGHVSLSNILTEAI-----LSSSPQDD-SKHL----RPPAF-SHAQCPPVM 290
S G S SN+ ++ + ++P+ S H R S + +
Sbjct: 368 TAEATSTSALGPSSPSNLYGNSMYFVNPVPATPKSAVSSHTAGLPRDARLRSSGRFRQDL 427
Query: 291 HRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGII 350
+ V FIA+H ++ D +S + EDWK+VA+V+DRLFLW+F + + GT G+
Sbjct: 428 QEALEGVSFIAQH--LESDDRDQSVI----EDWKFVAMVVDRLFLWVFVIVCILGTMGLF 481
Query: 351 LQAPSLYDDRVP 362
L P L+ P
Sbjct: 482 L--PPLFQIHAP 491
>UNIPROTKB|E2RIZ9 [details] [associations]
symbol:CHRNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 OMA:HREIVQV EMBL:AAEX03017779
Ensembl:ENSCAFT00000021074 Uniprot:E2RIZ9
Length = 457
Score = 470 (170.5 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 91/167 (54%), Positives = 119/167 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ FY CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKESRGWKHWVFYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 246 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 306 IASIIITVIVINTHHRSPSTHVMPDWVRKVFIDTIPNIMFFSTMKRP 352
Score = 87 (35.7 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + V++IAE + +S +
Sbjct: 361 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGVKYIAETMKSDQESNNAA 416
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 417 ------EEWKYVAMVMDHILLGVFMLVCIIGTLAV 445
>UNIPROTKB|F1P208 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0003009 "skeletal muscle contraction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=IEA] [GO:0046716 "muscle cell
homeostasis" evidence=IEA] [GO:0048630 "skeletal muscle tissue
growth" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0070050 "neuron homeostasis" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009986
GO:GO:0070050 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0031594 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GeneTree:ENSGT00630000089708 GO:GO:0005892
GO:GO:0015464 GO:GO:0046716 IPI:IPI00679393 OMA:YSCCPDT
EMBL:AADN02020075 EMBL:AADN02020076 EMBL:AADN02020077
ProteinModelPortal:F1P208 Ensembl:ENSGALT00000022743
ArrayExpress:F1P208 Uniprot:F1P208
Length = 467
Score = 473 (171.6 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 91/179 (50%), Positives = 125/179 (69%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW + + ++ +Y CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 196 DLSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMQRLPLYFIVNVIIPCLLF 255
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 256 SFLTGFVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 315
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRPLYN-PDGSHLAD 237
SI +TV+V+N H RSP TH M PWV+++FI +P I+ M+RP + PD A+
Sbjct: 316 IASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMFFSTMKRPSRDKPDKKIFAE 374
Score = 82 (33.9 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+++IAE + +S+ + ++WK+VA+VLD L L IF L + GT +
Sbjct: 409 IKYIAETMKSDQESSNAA------DEWKFVAMVLDHLLLVIFMLVCIIGTLAV 455
>UNIPROTKB|P09479 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 CTD:1134 eggNOG:NOG314424 KO:K04803
EMBL:X07330 EMBL:X07331 EMBL:X12434 EMBL:X12435 EMBL:X12436
EMBL:X07335 EMBL:AJ250359 EMBL:AF051909 EMBL:M14808 EMBL:M14809
IPI:IPI00679393 PIR:I50149 PIR:I50150 PIR:S00376 RefSeq:NP_990147.1
UniGene:Gga.4134 ProteinModelPortal:P09479 SMR:P09479 GeneID:395608
KEGG:gga:395608 InParanoid:P09479 NextBio:20815681 Uniprot:P09479
Length = 456
Score = 473 (171.6 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 91/179 (50%), Positives = 125/179 (69%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW + + ++ +Y CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 185 DLSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMQRLPLYFIVNVIIPCLLF 244
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 245 SFLTGFVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 304
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRPLYN-PDGSHLAD 237
SI +TV+V+N H RSP TH M PWV+++FI +P I+ M+RP + PD A+
Sbjct: 305 IASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMFFSTMKRPSRDKPDKKIFAE 363
Score = 82 (33.9 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+++IAE + +S+ + ++WK+VA+VLD L L IF L + GT +
Sbjct: 398 IKYIAETMKSDQESSNAA------DEWKFVAMVLDHLLLVIFMLVCIIGTLAV 444
>UNIPROTKB|P02709 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0070050 "neuron homeostasis" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0048630
"skeletal muscle tissue growth" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0042166 "acetylcholine binding"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0003009 "skeletal muscle contraction"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009986
GO:GO:0070050 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007528 GO:GO:0007274 GO:GO:0031594
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 GO:GO:0005892 GO:GO:0015464
GO:GO:0019228 EMBL:X02509 IPI:IPI00687829 PIR:A03169
RefSeq:NP_788837.1 UniGene:Bt.16021 ProteinModelPortal:P02709
SMR:P02709 PRIDE:P02709 Ensembl:ENSBTAT00000024298 GeneID:338070
KEGG:bta:338070 CTD:1134 eggNOG:NOG314424 InParanoid:P02709
KO:K04803 OMA:HREIVQV OrthoDB:EOG4KSPJW NextBio:20812520
GO:GO:0046716 GO:GO:0050905 GO:GO:0003009 GO:GO:0048630
Uniprot:P02709
Length = 457
Score = 470 (170.5 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 91/167 (54%), Positives = 119/167 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ FY CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKESRGWKHWVFYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 246 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 306 IASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRP 352
Score = 85 (35.0 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 361 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 416
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 417 ------EEWKYVAMVMDHILLAVFMLVCIIGTLAV 445
>UNIPROTKB|F1RZI3 [details] [associations]
symbol:F1RZI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00630000089708
EMBL:CU469346 Ensembl:ENSSSCT00000017388 ArrayExpress:F1RZI3
Uniprot:F1RZI3
Length = 457
Score = 469 (170.2 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 90/167 (53%), Positives = 118/167 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKEARGWKHRVLYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 246 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 306 IASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRP 352
Score = 86 (35.3 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 361 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 416
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 417 ------EEWKYVAMVMDHILLGVFMLVCIIGTLAV 445
>UNIPROTKB|I3L584 [details] [associations]
symbol:I3L584 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070050 "neuron homeostasis" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048630 "skeletal muscle
tissue growth" evidence=IEA] [GO:0046716 "muscle cell homeostasis"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0003009 "skeletal muscle contraction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889
GeneTree:ENSGT00630000089708 OMA:YSCCPDT EMBL:CU469346
Ensembl:ENSSSCT00000028883 Uniprot:I3L584
Length = 480
Score = 469 (170.2 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 90/167 (53%), Positives = 118/167 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 209 DLSNFMESGEWVIKEARGWKHRVLYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 268
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 269 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 328
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 329 IASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRP 375
Score = 86 (35.3 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 384 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 439
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 440 ------EEWKYVAMVMDHILLGVFMLVCIIGTLAV 468
>UNIPROTKB|I3L8N6 [details] [associations]
symbol:LOC100626974 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 Ensembl:ENSSSCT00000028323
Uniprot:I3L8N6
Length = 448
Score = 469 (170.2 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 90/167 (53%), Positives = 118/167 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 177 DLSNFMESGEWVIKEARGWKHRVLYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 236
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 237 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 296
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 297 IASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRP 343
Score = 86 (35.3 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 352 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 407
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 408 ------EEWKYVAMVMDHILLGVFMLVCIIGTLAV 436
>UNIPROTKB|I3LDY9 [details] [associations]
symbol:LOC100626974 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00630000089708
OMA:HREIVQV Ensembl:ENSSSCT00000029889 Uniprot:I3LDY9
Length = 473
Score = 469 (170.2 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 90/167 (53%), Positives = 118/167 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 202 DLSNFMESGEWVIKEARGWKHRVLYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 261
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 262 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 321
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 322 IASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRP 368
Score = 86 (35.3 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 377 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 432
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 433 ------EEWKYVAMVMDHILLGVFMLVCIIGTLAV 461
>UNIPROTKB|I3LUK2 [details] [associations]
symbol:I3LUK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00630000089708
EMBL:CU469346 Ensembl:ENSSSCT00000025075 Uniprot:I3LUK2
Length = 460
Score = 469 (170.2 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 90/167 (53%), Positives = 118/167 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y CC PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 189 DLSNFMESGEWVIKEARGWKHRVLYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 248
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 249 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 308
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 309 IASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRP 355
Score = 86 (35.3 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 364 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 419
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
E+WKYVA+V+D + L +F L + GT +
Sbjct: 420 ------EEWKYVAMVMDHILLGVFMLVCIIGTLAV 448
>UNIPROTKB|F1PN73 [details] [associations]
symbol:CHRNB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 OMA:INENVDR EMBL:AAEX03010368
Ensembl:ENSCAFT00000008790 Uniprot:F1PN73
Length = 456
Score = 446 (162.1 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 88/166 (53%), Positives = 125/166 (75%)
Query: 63 VDLSEFYMSVEWDILEVPAV---RNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPC 119
VD ++F+ + EW+IL + R + FY+ P+ IT+++ +RR LFYT+ +IIPC
Sbjct: 188 VDRNDFFDNGEWEILNAKGMKGNRRDGFYSY---PF--ITYSLVLRRLPLFYTLFLIIPC 242
Query: 120 MGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
+G+SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F M
Sbjct: 243 LGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIM 302
Query: 180 ILVSISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
+ V++SI VTV V+NVH RS T H MAPWVKR+F+Q LP++L M+
Sbjct: 303 VFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPKVLCMK 348
Score = 109 (43.4 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ ++ +R+I+ H + KE + V +DWK+VA VLDR+FLW+F + + G+ +
Sbjct: 390 LEKAADSIRYISRHVK------KEHFINQVVQDWKFVAQVLDRIFLWLFLIVSVTGS--V 441
Query: 350 ILQAPSL 356
++ P+L
Sbjct: 442 LIFTPAL 448
>RGD|2351 [details] [associations]
symbol:Chrnb4 "cholinergic receptor, nicotinic, beta 4 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA;IC] [GO:0005886
"plasma membrane" evidence=IEA;IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=ISO;IDA;TAS] [GO:0006939 "smooth muscle
contraction" evidence=IEA;ISO] [GO:0006940 "regulation of smooth
muscle contraction" evidence=IEA;ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0008144 "drug binding" evidence=IDA]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0035094 "response to nicotine" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IDA] [GO:0042391 "regulation of
membrane potential" evidence=ISO] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0060084
"synaptic transmission involved in micturition" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2351 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
PDB:1OLJ PDBsum:1OLJ HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1143 KO:K04815 EMBL:U42976
EMBL:M33953 EMBL:J05232 EMBL:M89971 EMBL:M33951 EMBL:M89989
EMBL:M33952 EMBL:X15834 EMBL:AY574260 IPI:IPI00196743 IPI:IPI00231372
PIR:A30992 PIR:B35721 RefSeq:NP_434693.1 UniGene:Rn.9695
ProteinModelPortal:P12392 SMR:P12392 STRING:P12392 PhosphoSite:P12392
Ensembl:ENSRNOT00000019458 GeneID:25103 KEGG:rno:25103 UCSC:RGD:2351
BindingDB:P12392 ChEMBL:CHEMBL2658 NextBio:605427 ArrayExpress:P12392
Genevestigator:P12392 GermOnline:ENSRNOG00000014427 Uniprot:P12392
Length = 495
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 125/312 (40%), Positives = 174/312 (55%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 191 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITS 247
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L F LL+ +I+PPTSL +PL+GKYL+F M+LV+
Sbjct: 248 LAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTF 307
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP--------LYNPDGSHLA 236
SI TV VLNVH RSP TH MA WVK F+ LP L M+RP + +P HLA
Sbjct: 308 SIVTTVCVLNVHHRSPSTHTMASWVKECFLHKLPTFLFMKRPGLEVSLVRVPHPSQLHLA 367
Query: 237 DGPLIGGSG-GSCKIHGHVSLSNILTEAILSSSPQDDSKHL----RPPAF-SHAQCPPVM 290
S G S + ++ S H R S + +
Sbjct: 368 TADTAATSALGPTSPSNLYGSSMYFVNPVPAAPKSAVSSHTAGLPRDARLRSSGRFREDL 427
Query: 291 HRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGII 350
+ V FIA+H ++ D +S + EDWK+VA+V+DRLFLW+F + GT G+
Sbjct: 428 QEALEGVSFIAQH--LESDDRDQSVI----EDWKFVAMVVDRLFLWVFVFVCILGTMGLF 481
Query: 351 LQAPSLYDDRVP 362
L P L+ P
Sbjct: 482 L--PPLFQIHAP 491
>UNIPROTKB|P12392 [details] [associations]
symbol:Chrnb4 "Neuronal acetylcholine receptor subunit
beta-4" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2351 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
PDB:1OLJ PDBsum:1OLJ HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1143 KO:K04815 EMBL:U42976
EMBL:M33953 EMBL:J05232 EMBL:M89971 EMBL:M33951 EMBL:M89989
EMBL:M33952 EMBL:X15834 EMBL:AY574260 IPI:IPI00196743
IPI:IPI00231372 PIR:A30992 PIR:B35721 RefSeq:NP_434693.1
UniGene:Rn.9695 ProteinModelPortal:P12392 SMR:P12392 STRING:P12392
PhosphoSite:P12392 Ensembl:ENSRNOT00000019458 GeneID:25103
KEGG:rno:25103 UCSC:RGD:2351 BindingDB:P12392 ChEMBL:CHEMBL2658
NextBio:605427 ArrayExpress:P12392 Genevestigator:P12392
GermOnline:ENSRNOG00000014427 Uniprot:P12392
Length = 495
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 125/312 (40%), Positives = 174/312 (55%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ ++RK LFYT+N+IIPC+ I+
Sbjct: 191 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITS 247
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L F LL+ +I+PPTSL +PL+GKYL+F M+LV+
Sbjct: 248 LAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTF 307
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP--------LYNPDGSHLA 236
SI TV VLNVH RSP TH MA WVK F+ LP L M+RP + +P HLA
Sbjct: 308 SIVTTVCVLNVHHRSPSTHTMASWVKECFLHKLPTFLFMKRPGLEVSLVRVPHPSQLHLA 367
Query: 237 DGPLIGGSG-GSCKIHGHVSLSNILTEAILSSSPQDDSKHL----RPPAF-SHAQCPPVM 290
S G S + ++ S H R S + +
Sbjct: 368 TADTAATSALGPTSPSNLYGSSMYFVNPVPAAPKSAVSSHTAGLPRDARLRSSGRFREDL 427
Query: 291 HRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGII 350
+ V FIA+H ++ D +S + EDWK+VA+V+DRLFLW+F + GT G+
Sbjct: 428 QEALEGVSFIAQH--LESDDRDQSVI----EDWKFVAMVVDRLFLWVFVFVCILGTMGLF 481
Query: 351 LQAPSLYDDRVP 362
L P L+ P
Sbjct: 482 L--PPLFQIHAP 491
>UNIPROTKB|P43679 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 EMBL:X83739 IPI:IPI00602078 PIR:A55972
RefSeq:NP_990143.1 UniGene:Gga.335 ProteinModelPortal:P43679
SMR:P43679 GeneID:395604 KEGG:gga:395604 CTD:1142 eggNOG:NOG252943
InParanoid:P43679 KO:K04814 OrthoDB:EOG40VVPK NextBio:20815677
Uniprot:P43679
Length = 455
Score = 445 (161.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 86/163 (52%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL ++ + P+ +T++ +RR LFYT+ +IIPC+G+
Sbjct: 187 VDTKDFFDNGEWEILNAKGMKGNRKDGLYSYPF--VTYSFVLRRLPLFYTLFLIIPCLGL 244
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 245 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 304
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H MAPWVKR+F+Q LPR+L M+
Sbjct: 305 TLSIIVTVFVINVHHRSSATYHPMAPWVKRLFLQKLPRLLCMK 347
Score = 109 (43.4 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ ++ +R+I+ H + K++ + V +DWK+VA VLDR+FLW+F V+ T +
Sbjct: 389 LEKAADSIRYISRHVK------KDAFIRQVVQDWKFVAQVLDRIFLWLFL--VVSVTGSV 440
Query: 350 ILQAPSL 356
++ P+L
Sbjct: 441 LIFTPAL 447
>UNIPROTKB|F1NKI4 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 IPI:IPI00602078 OMA:INENVDR
EMBL:AADN02066018 Ensembl:ENSGALT00000024820 Uniprot:F1NKI4
Length = 455
Score = 444 (161.4 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 86/163 (52%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL ++ + P+ +T++ +RR LFYT+ +IIPC+G+
Sbjct: 187 VDRKDFFDNGEWEILNAKGMKGNRKDGLYSYPF--VTYSFVLRRLPLFYTLFLIIPCLGL 244
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 245 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 304
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H MAPWVKR+F+Q LPR+L M+
Sbjct: 305 TLSIIVTVFVINVHHRSSATYHPMAPWVKRLFLQKLPRLLCMK 347
Score = 110 (43.8 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ ++ +R+I+ H + KE + V +DWK+VA VLDR+FLW+F V+ T +
Sbjct: 389 LEKAADSIRYISRHVK------KEHFIRQVVQDWKFVAQVLDRIFLWLFL--VVSVTGSV 440
Query: 350 ILQAPSL 356
++ P+L
Sbjct: 441 LIFTPAL 447
>MGI|MGI:87889 [details] [associations]
symbol:Chrna5 "cholinergic receptor, nicotinic, alpha
polypeptide 5" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IPI]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0035094
"response to nicotine" evidence=IMP] [GO:0035095 "behavioral
response to nicotine" evidence=ISO] [GO:0042166 "acetylcholine
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87889 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025
GO:GO:0030425 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0015464
GeneTree:ENSGT00620000087732 GO:GO:0035094 CTD:1138
eggNOG:NOG267611 KO:K04807 OMA:WANILIP OrthoDB:EOG41JZC6
EMBL:AY574264 EMBL:DQ318788 EMBL:BC106853 IPI:IPI00135097
IPI:IPI00753293 RefSeq:NP_789814.2 UniGene:Mm.103778
ProteinModelPortal:Q2MKA5 SMR:Q2MKA5 STRING:Q2MKA5
PhosphoSite:Q2MKA5 PRIDE:Q2MKA5 Ensembl:ENSMUST00000093844
GeneID:110835 KEGG:mmu:110835 UCSC:uc009prv.2 UCSC:uc009prw.2
InParanoid:Q2MKA5 NextBio:364755 Bgee:Q2MKA5 Genevestigator:Q2MKA5
Uniprot:Q2MKA5
Length = 467
Score = 430 (156.4 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 79/163 (48%), Positives = 119/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD ++F+ + EW+I+ + + +CC P IT++ ++R LFYT+ +IIPC+G+
Sbjct: 207 VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPC--ITYSFVIKRLPLFYTLFLIIPCIGL 264
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTV+ FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 265 SFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 324
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 325 TLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 367
Score = 124 (48.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPS 355
C+R+I H KE+ + V EDWK++A VLDR+FLW F L + GT G+ + P
Sbjct: 398 CIRYITRHV------VKENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGTLGLFV--PV 449
Query: 356 LY 357
+Y
Sbjct: 450 IY 451
>UNIPROTKB|Q05901 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0006810 "transport" evidence=TAS] [GO:0005892
"acetylcholine-gated channel complex" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0007271 "synaptic
transmission, cholinergic" evidence=TAS] [GO:0015267 "channel
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007165 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892
CTD:1142 eggNOG:NOG252943 KO:K04814 OrthoDB:EOG40VVPK EMBL:U62438
EMBL:Y08417 EMBL:AF140765 EMBL:AF140760 EMBL:AF140761 EMBL:AF140762
EMBL:AF140763 EMBL:AF140764 EMBL:BC069681 EMBL:BC069703
EMBL:BC069788 EMBL:X67513 IPI:IPI00016662 PIR:I38056
RefSeq:NP_000740.1 UniGene:Hs.654576 ProteinModelPortal:Q05901
SMR:Q05901 STRING:Q05901 PhosphoSite:Q05901 DMDM:2506128
PaxDb:Q05901 PRIDE:Q05901 DNASU:1142 Ensembl:ENST00000289957
GeneID:1142 KEGG:hsa:1142 UCSC:uc003xpi.1 GeneCards:GC08P042552
HGNC:HGNC:1963 HPA:HPA045555 MIM:118508 neXtProt:NX_Q05901
PharmGKB:PA26495 InParanoid:Q05901 OMA:INENVDR PhylomeDB:Q05901
BindingDB:Q05901 ChEMBL:CHEMBL2586 GenomeRNAi:1142 NextBio:4752
Bgee:Q05901 CleanEx:HS_CHRNB3 Genevestigator:Q05901
GermOnline:ENSG00000147432 Uniprot:Q05901
Length = 458
Score = 443 (161.0 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 86/163 (52%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL ++ + P+ IT++ +RR LFYT+ +IIPC+G+
Sbjct: 190 VDRKDFFDNGEWEILNAKGMKGNRRDGVYSYPF--ITYSFVLRRLPLFYTLFLIIPCLGL 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 248 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 307
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H MAPWVKR+F+Q LP++L M+
Sbjct: 308 TLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPKLLCMK 350
Score = 110 (43.8 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ ++ +R+I+ H + KE + V +DWK+VA VLDR+FLW+F + + G+ +
Sbjct: 392 LEKAADSIRYISRHVK------KEHFISQVVQDWKFVAQVLDRIFLWLFLIVSVTGS--V 443
Query: 350 ILQAPSL 356
++ P+L
Sbjct: 444 LIFTPAL 450
>UNIPROTKB|B8ZZD3 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 GO:GO:0016021
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 HOVERGEN:HBG003756 HOGENOM:HOG000006756
HGNC:HGNC:1955 EMBL:AC018890 IPI:IPI00917035
ProteinModelPortal:B8ZZD3 SMR:B8ZZD3 STRING:B8ZZD3
Ensembl:ENST00000409542 ArrayExpress:B8ZZD3 Bgee:B8ZZD3
Uniprot:B8ZZD3
Length = 375
Score = 471 (170.9 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 91/167 (54%), Positives = 120/167 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y+CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 104 DLSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 163
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 164 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 223
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 224 IASIIITVIVINTHHRSPSTHVMPNWVRKVFIDTIPNIMFFSTMKRP 270
Score = 81 (33.6 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 279 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 334
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+WKYVA+V+D + L +F L + GT +
Sbjct: 335 A------EWKYVAMVMDHILLGVFMLVCIIGTLAV 363
>UNIPROTKB|P02708 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=TAS]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=IMP] [GO:0031594
"neuromuscular junction" evidence=ISS;IDA] [GO:0042391 "regulation
of membrane potential" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=ISS;TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0070050 "neuron homeostasis" evidence=IMP] [GO:0003009
"skeletal muscle contraction" evidence=IMP] [GO:0019228 "regulation
of action potential in neuron" evidence=IMP] [GO:0046716 "muscle
cell homeostasis" evidence=IMP] [GO:0045211 "postsynaptic membrane"
evidence=NAS] [GO:0048630 "skeletal muscle tissue growth"
evidence=IMP] [GO:0050881 "musculoskeletal movement" evidence=IMP]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISS] [GO:0015464 "acetylcholine receptor
activity" evidence=ISS] [GO:0042166 "acetylcholine binding"
evidence=ISS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009986 GO:GO:0070050
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0007528 GO:GO:0007274
GO:GO:0031594 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0015464 GO:GO:0019228
CTD:1134 eggNOG:NOG314424 KO:K04803 GO:GO:0046716 GO:GO:0050905
GO:GO:0003009 GO:GO:0048630 OMA:YSCCPDT EMBL:X02502 EMBL:X02503
EMBL:X02504 EMBL:X02505 EMBL:X02506 EMBL:X02507 EMBL:X02508
EMBL:Y00762 EMBL:X17104 EMBL:AK299445 EMBL:CH471058 EMBL:S77094
EMBL:X70108 IPI:IPI00022298 IPI:IPI00218234 PIR:A03168 PIR:S10148
RefSeq:NP_000070.1 RefSeq:NP_001034612.1 UniGene:Hs.434479 PDB:1Y5P
PDB:1Y5T PDB:1Y6C PDBsum:1Y5P PDBsum:1Y5T PDBsum:1Y6C
ProteinModelPortal:P02708 SMR:P02708 STRING:P02708
PhosphoSite:P02708 DMDM:113071 PRIDE:P02708 DNASU:1134
Ensembl:ENST00000261007 Ensembl:ENST00000348749 GeneID:1134
KEGG:hsa:1134 UCSC:uc002ujd.2 GeneCards:GC02M175612 HGNC:HGNC:1955
HPA:CAB010902 MIM:100690 MIM:253290 MIM:254200 MIM:601462
MIM:608930 neXtProt:NX_P02708 Orphanet:33108 Orphanet:98913
PharmGKB:PA26487 InParanoid:P02708 PhylomeDB:P02708
BindingDB:P02708 ChEMBL:CHEMBL4808 GenomeRNAi:1134 NextBio:4716
ArrayExpress:P02708 Bgee:P02708 CleanEx:HS_CHRNA1
Genevestigator:P02708 GermOnline:ENSG00000138435 Uniprot:P02708
Length = 482
Score = 471 (170.9 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 91/167 (54%), Positives = 120/167 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y+CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 211 DLSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 270
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 271 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 330
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV++VFI +P I+ M+RP
Sbjct: 331 IASIIITVIVINTHHRSPSTHVMPNWVRKVFIDTIPNIMFFSTMKRP 377
Score = 81 (33.6 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 259 ILTEAI----LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKES 314
I TE I +S P P H P + + +++IAE + +S +
Sbjct: 386 IFTEDIDISDISGKPGPPPMGFHSPLIKH----PEVKSAIEGIKYIAETMKSDQESNNAA 441
Query: 315 TLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+WKYVA+V+D + L +F L + GT +
Sbjct: 442 A------EWKYVAMVMDHILLGVFMLVCIIGTLAV 470
>FB|FBgn0086778 [details] [associations]
symbol:gfA "giant fibre A" species:7227 "Drosophila
melanogaster" [GO:0007630 "jump response" evidence=IMP] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;NAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS;NAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IMP] [GO:0007632 "visual
behavior" evidence=IMP] [GO:0030425 "dendrite" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0043197
GO:GO:0060079 GO:GO:0004889 GeneTree:ENSGT00630000089708
GO:GO:0005892 OMA:AGPPATN GO:GO:0007632 ChiTaRS:GFPT1 GO:GO:0007630
RefSeq:NP_001162795.1 UniGene:Dm.17283 ProteinModelPortal:E1JJR2
SMR:E1JJR2 EnsemblMetazoa:FBtr0301835 GeneID:32928
KEGG:dme:Dmel_CG32538 CTD:32928 FlyBase:FBgn0086778
PhylomeDB:E1JJR2 GenomeRNAi:32928 NextBio:781075 Bgee:E1JJR2
Uniprot:E1JJR2
Length = 564
Score = 455 (165.2 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 83/169 (49%), Positives = 120/169 (71%)
Query: 58 RERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIII 117
++ G D+S F + EWD+L VP RNE +Y CC EPY+DITF I +RRKTL+Y N+I+
Sbjct: 218 QDEAGGDISSFITNGEWDLLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIV 277
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ I+ + +L F LP DSGEK++L ++IL+SL VF +V E +P TS VPLLG Y
Sbjct: 278 PCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNC 337
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
M +V+ S+ T+++LN H R+P TH+M+ W++ +F+ +LP IL M+RP
Sbjct: 338 IMFMVASSVVSTILILNYHHRNPDTHEMSEWIRVIFLYWLPCILRMQRP 386
Score = 95 (38.5 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAP 354
+R+I E + +D+++ + DWK+ A+V+DRL L IFTL + T ++ AP
Sbjct: 504 LRWITEQLKKEDETSD------ITRDWKFAAMVVDRLCLIIFTLFTIIATLAVLFSAP 555
>UNIPROTKB|Q8SPU7 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00620000087732 EMBL:AF487464 IPI:IPI00706226
RefSeq:NP_776939.1 UniGene:Bt.9979 ProteinModelPortal:Q8SPU7
SMR:Q8SPU7 Ensembl:ENSBTAT00000018151 GeneID:282177 KEGG:bta:282177
CTD:1138 eggNOG:NOG267611 InParanoid:Q8SPU7 KO:K04807 OMA:WANILIP
OrthoDB:EOG41JZC6 NextBio:20806006 Uniprot:Q8SPU7
Length = 475
Score = 437 (158.9 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 81/163 (49%), Positives = 118/163 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ + + +CC PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 214 VDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPY--ITYSFVIKRLPLFYTLFLIIPCIGL 271
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ GEK+ L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 272 SFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 331
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 332 TLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKLLCMR 374
Score = 113 (44.8 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
VR+I H M++ +E V EDWK++A VLDR+FLW F L + G+ G+ + P +
Sbjct: 407 VRYITRHV-MKETDVRE-----VVEDWKFIAQVLDRMFLWTFLLVSVVGSLGLFV--PVI 458
Query: 357 Y 357
Y
Sbjct: 459 Y 459
>UNIPROTKB|F1P718 [details] [associations]
symbol:CHRNA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03008991
Ensembl:ENSCAFT00000002737 Uniprot:F1P718
Length = 375
Score = 431 (156.8 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 80/163 (49%), Positives = 117/163 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ R + + C PY +T++ ++R LFYT+ +IIPC+G+
Sbjct: 115 VDKRDFFDNGEWEIVSATGSRGNRTDSACWYPY--VTYSFVIKRLPLFYTLFLIIPCIGL 172
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ GEK+ L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 173 SFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 232
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 233 TLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKVLCMR 275
Score = 118 (46.6 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+R+I H R ++D +E V EDWK++A VLDR+FLW F L + G+ G+ + P +
Sbjct: 307 IRYITRHVRKEND-VRE-----VVEDWKFIAQVLDRMFLWTFLLVSVVGSLGLFV--PVI 358
Query: 357 Y 357
Y
Sbjct: 359 Y 359
>WB|WBGene00000042 [details] [associations]
symbol:acr-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA;IDA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0043005
"neuron projection" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=ISS] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 eggNOG:NOG267576
GO:GO:0015464 TCDB:1.A.9.1.2 EMBL:X86403 EMBL:FO081325 PIR:S57648
RefSeq:NP_509128.1 UniGene:Cel.18149 ProteinModelPortal:P48182
SMR:P48182 PaxDb:P48182 EnsemblMetazoa:K11G12.2 GeneID:180936
KEGG:cel:CELE_K11G12.2 UCSC:K11G12.2 CTD:180936 WormBase:K11G12.2
InParanoid:P48182 OMA:ENCSKWK NextBio:911638 Uniprot:P48182
Length = 575
Score = 405 (147.6 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 81/164 (49%), Positives = 119/164 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
V L ++ S WD+++VP K D + FN+ +RRKTLFYTV +IIP + +
Sbjct: 224 VQLHDYSYSGIWDVIDVPGQLVHK----PDLKENKMVFNVVIRRKTLFYTVILIIPTVLM 279
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
+FL+V+ FYLP DSGEKV+L+IS+L++L VF LLV +I+PPTS + PL+GKYL+ A +L
Sbjct: 280 AFLSVMAFYLPVDSGEKVSLTISLLLALVVFLLLVSKILPPTSNI-PLMGKYLLLAFVLN 338
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++ TVV++N++FRS +HKM WV++VF++FLP +LVM+RP
Sbjct: 339 ITAVVGTVVIVNIYFRSALSHKMPTWVRKVFLEFLPHLLVMKRP 382
Score = 144 (55.7 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 34/72 (47%), Positives = 46/72 (63%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+ +IAEH + +E +L +++DWKYVA+VLDRL L IF LGGT GII AP +
Sbjct: 498 IAYIAEHMK------REMSLKKMRDDWKYVAMVLDRLILLIFFGVTLGGTLGIICSAPHV 551
Query: 357 YD--DRVPIDSK 366
+D D+ I SK
Sbjct: 552 FDFVDQEAIISK 563
>ZFIN|ZDB-GENE-040108-1 [details] [associations]
symbol:chrnb3a "cholinergic receptor, nicotinic, beta
polypeptide 3a" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-040108-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG252943 KO:K04814 EMBL:BC162133
EMBL:BC162137 EMBL:AY256909 IPI:IPI00506810 RefSeq:NP_957514.1
UniGene:Dr.79601 SMR:Q7ZZP6 GeneID:794401 KEGG:dre:794401
CTD:794401 InParanoid:Q7ZZP6 OrthoDB:EOG4FJ88Z NextBio:20931840
Uniprot:Q7ZZP6
Length = 467
Score = 440 (159.9 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 88/163 (53%), Positives = 117/163 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL R + PYL T++ ++R LFYT+ +IIPC+G+
Sbjct: 193 VDRKDFFDNGEWEILNATGQRGSRRDGIYSYPYL--TYSFILKRLPLFYTLFLIIPCLGL 250
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 251 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 310
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
+ SI VTV V+NVH RS T H MAPWVK +F+Q LPR+L MR
Sbjct: 311 TFSIIVTVFVINVHHRSSATYHPMAPWVKSLFLQRLPRLLCMR 353
Score = 108 (43.1 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 289 VMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF-TLAVLGGTA 347
++ ++ V +I+ H R KE + V +DWK+VA VLDR+FLW F T++VLG
Sbjct: 401 LLEKATHSVHYISRHIR------KEHFIREVVQDWKFVAQVLDRIFLWAFLTVSVLGT-- 452
Query: 348 GIILQAPSL 356
I++ P+L
Sbjct: 453 -ILIFTPAL 460
>ZFIN|ZDB-GENE-980526-137 [details] [associations]
symbol:chrna1 "cholinergic receptor, nicotinic,
alpha polypeptide 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IDA] [GO:0048705 "skeletal system
morphogenesis" evidence=IMP] [GO:0003428 "chondrocyte intercalation
involved in growth plate cartilage morphogenesis" evidence=IMP]
[GO:0086009 "membrane repolarization" evidence=IMP] [GO:0030516
"regulation of axon extension" evidence=IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IDA] [GO:0008045
"motor neuron axon guidance" evidence=IMP] [GO:0005261 "cation
channel activity" evidence=IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IDA;IMP] [GO:0042166 "acetylcholine
binding" evidence=IMP] [GO:0048741 "skeletal muscle fiber
development" evidence=IMP] [GO:0043113 "receptor clustering"
evidence=IMP] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-980526-137 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0008045 GO:GO:0005261 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 GO:GO:0005892
CTD:1134 eggNOG:NOG314424 KO:K04803 OrthoDB:EOG4KSPJW EMBL:AH003668
EMBL:U70437 EMBL:U70438 EMBL:BC081554 IPI:IPI00484016
RefSeq:NP_571520.1 UniGene:Dr.75091 ProteinModelPortal:Q98880
SMR:Q98880 STRING:Q98880 Ensembl:ENSDART00000020261 GeneID:30725
KEGG:dre:30725 OMA:YSCCPDT NextBio:20807074 ArrayExpress:Q98880
Bgee:Q98880 GO:GO:0003428 GO:GO:0086009 GO:GO:0043113 GO:GO:0030516
GO:GO:0048741 Uniprot:Q98880
Length = 456
Score = 461 (167.3 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 88/167 (52%), Positives = 120/167 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW + + + ++ +Y CC D PYLDIT++ + R L++ VN+IIPCM
Sbjct: 186 DLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLLLRLPLYFIVNVIIPCMLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F MI V
Sbjct: 246 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRP 226
SI +TV+V+N H RSP TH M WV+++FI +P ++ M+RP
Sbjct: 306 IASIIITVIVINTHHRSPSTHIMPAWVRKIFIDTIPNMMFFSTMKRP 352
Score = 83 (34.3 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
V++IA+ + ++S + E+WK+VA+VLD + L +F + GT G+
Sbjct: 399 VKYIADTMKSDEESNNAA------EEWKFVAMVLDHILLCVFMAVCIIGTLGV 445
>UNIPROTKB|I3LLF5 [details] [associations]
symbol:CHRNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1142 KO:K04814 OMA:PSETIWL
EMBL:FP339586 RefSeq:XP_003359920.2 Ensembl:ENSSSCT00000029069
GeneID:100622201 KEGG:ssc:100622201 Uniprot:I3LLF5
Length = 458
Score = 430 (156.4 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 85/163 (52%), Positives = 117/163 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL + P+ +T+ +RR LFYT+ +IIPC+G+
Sbjct: 190 VDRKDFFDNGEWEILNAKGRAGSRREGMRRYPF--VTYAFVLRRLPLFYTLFLIIPCLGL 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 248 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 307
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H MAPWVKR+F+Q LP++L M+
Sbjct: 308 TLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPKLLCMK 350
Score = 114 (45.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 272 DSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLD 331
+ K LR + + ++ +R+I+ H R KE + V +DWK+ A VLD
Sbjct: 374 EKKKLRHMSEGEKVLVAFLEKAADSIRYISSHVR------KEHFISQVVQDWKFAAQVLD 427
Query: 332 RLFLWIFTLAVLGGTAGIILQAPSL 356
R+FLW+F +A + G+ +++ P+L
Sbjct: 428 RIFLWLFLVASITGS--VLIFTPAL 450
>UNIPROTKB|G3N1V0 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0035095 "behavioral response
to nicotine" evidence=IEA] [GO:0015464 "acetylcholine receptor
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 EMBL:DAAA02052433
Ensembl:ENSBTAT00000065085 Uniprot:G3N1V0
Length = 506
Score = 437 (158.9 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 81/163 (49%), Positives = 118/163 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ + + +CC PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 189 VDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPY--ITYSFVIKRLPLFYTLFLIIPCIGL 246
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ GEK+ L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 247 SFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 306
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 307 TLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKLLCMR 349
Score = 106 (42.4 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 313 ESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
E + V EDWK++A VLDR+FLW F L + G+ G+ + P +Y
Sbjct: 459 EKLTLQVVEDWKFIAQVLDRMFLWTFLLVSVVGSLGLFV--PVIY 501
>UNIPROTKB|F1P722 [details] [associations]
symbol:CHRNA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 OMA:WANILIP EMBL:AAEX03008991
Ensembl:ENSCAFT00000002736 Uniprot:F1P722
Length = 490
Score = 440 (159.9 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 94/235 (40%), Positives = 143/235 (60%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ R + + C PY +T++ ++R LFYT+ +IIPC+G+
Sbjct: 161 VDKRDFFDNGEWEIVSATGSRGNRTDSACWYPY--VTYSFVIKRLPLFYTLFLIIPCIGL 218
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ GEK+ L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 219 SFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 278
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLI 241
++SI VTV +N+H RS TH MAPWV+++F+ LP++L MR + D G
Sbjct: 279 TLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKVLCMRS---HADRYFAQAGTGG 335
Query: 242 GGSGGSCKIHGHVSLSNI--LTEAILSSSPQDDSK-HLRPPAFSHAQC--PPVMH 291
GS G+ + +L +I +T + + + + PP +C PP +H
Sbjct: 336 AGSPGAPRNTLEAALDSIRYITRHVRKENDVREIRARAHPPGARKVECLQPPEVH 390
Score = 101 (40.6 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 319 VKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
V EDWK++A VLDR+FLW F L + G+ G+ + P +Y
Sbjct: 448 VVEDWKFIAQVLDRMFLWTFLLVSVVGSLGLFV--PVIY 484
>UNIPROTKB|F1MF30 [details] [associations]
symbol:CHRNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1142 KO:K04814 EMBL:DAAA02060957
IPI:IPI00690153 RefSeq:XP_002698773.1 RefSeq:XP_003584227.1
ProteinModelPortal:F1MF30 Ensembl:ENSBTAT00000039752 GeneID:521702
KEGG:bta:521702 OMA:PSETIWL NextBio:20873349 Uniprot:F1MF30
Length = 466
Score = 430 (156.4 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 82/163 (50%), Positives = 118/163 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL + + P+ I+++ +RR LFYT+ +I+PC+G+
Sbjct: 198 VDRKDFFDNGEWEILNAKGTAGGRRHGAYWYPF--ISYSFVLRRLPLFYTLFLIVPCLGL 255
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F M+ V
Sbjct: 256 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMVFV 315
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H M PWVKR+F+Q LP++L M+
Sbjct: 316 TLSIIVTVFVINVHHRSSSTYHPMVPWVKRLFLQTLPKLLCMK 358
Score = 110 (43.8 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 290 MHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+ ++ +R+I+ H + KE + V +DWK+ A VLDR+FLW+F +A + G+ +
Sbjct: 400 LEKAADSIRYISSHVK------KEHFISQVVQDWKFAAQVLDRIFLWLFLIASVTGS--V 451
Query: 350 ILQAPSL 356
++ P+L
Sbjct: 452 LIFTPAL 458
>UNIPROTKB|F1NAI4 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 OMA:HISQKND GeneTree:ENSGT00620000087732
GO:GO:0035094 IPI:IPI00571201 EMBL:AADN02040457
Ensembl:ENSGALT00000004776 ArrayExpress:F1NAI4 Uniprot:F1NAI4
Length = 453
Score = 433 (157.5 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 80/167 (47%), Positives = 119/167 (71%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E VD +F+ + EW+I+ + + CC P+ +T++ +RR LFYT+ +IIP
Sbjct: 188 EDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPF--VTYSFIIRRLPLFYTLFLIIP 245
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+G+SFLTVL FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F
Sbjct: 246 CIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFT 305
Query: 179 MILVSISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
MI V++SI +TV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 306 MIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 352
Score = 106 (42.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+R+I H M+++ +E V EDWK++A VLDR+FLW F L + G+ ++L P +
Sbjct: 385 IRYITRHV-MKENEVRE-----VVEDWKFIAQVLDRMFLWAFLLVSIIGS--LVLFIPVI 436
Query: 357 Y 357
+
Sbjct: 437 H 437
>ZFIN|ZDB-GENE-050417-440 [details] [associations]
symbol:chrna5 "cholinergic receptor, nicotinic,
alpha 5" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-050417-440 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00620000087732 CTD:1138
eggNOG:NOG267611 KO:K04807 OMA:WANILIP OrthoDB:EOG41JZC6
EMBL:CT027604 EMBL:BC092962 IPI:IPI00570130 RefSeq:NP_001017885.1
UniGene:Dr.87327 SMR:Q567Y7 Ensembl:ENSDART00000021372
GeneID:550584 KEGG:dre:550584 NextBio:20879821 Uniprot:Q567Y7
Length = 466
Score = 424 (154.3 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 89/188 (47%), Positives = 124/188 (65%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E V VD +++ + EW+I V A N Y IT++ +RR LFYT+ +IIP
Sbjct: 192 EDVHVDKRDYFDNGEWEI--VKATGNRGLRRDGTFFYPSITYSFIIRRLPLFYTLFLIIP 249
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+G+SFLTVL FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F
Sbjct: 250 CIGLSFLTVLVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFT 309
Query: 179 MILVSISICVTVVVLNVHFRSPQTH-KMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
MI V++SI +TV +N+H RS TH MAPWV+R+F+ LPR+L MR + D +
Sbjct: 310 MIFVTLSIVITVFAINIHHRSSSTHHSMAPWVRRIFLHHLPRLLCMRSHV---DRYATSA 366
Query: 238 GPLIGGSG 245
G GG G
Sbjct: 367 GTRTGGLG 374
Score = 114 (45.2 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+R+I H KE+ + V +DWK+VA VLDR+FLW F L L G+A +L P +
Sbjct: 399 IRYITRHV------VKENEVREVVQDWKFVAQVLDRVFLWAFLLVSLLGSA--LLFIPVI 450
Query: 357 YDDRVPIDSKFAEIAN 372
Y I +AEI +
Sbjct: 451 YKWASIIVPSYAEITS 466
>RGD|2348 [details] [associations]
symbol:Chrna7 "cholinergic receptor, nicotinic, alpha 7 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0000187 "activation of MAPK
activity" evidence=ISO] [GO:0001540 "beta-amyloid binding"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0001988 "positive regulation of heart rate involved in
baroreceptor response to decreased systemic arterial blood pressure"
evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA;TAS]
[GO:0006811 "ion transport" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO;IMP] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006897 "endocytosis" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007271 "synaptic
transmission, cholinergic" evidence=ISO;IMP] [GO:0007613 "memory"
evidence=IEA;ISO] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008179 "adenylate cyclase binding" evidence=IPI] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO] [GO:0008306
"associative learning" evidence=IEA;ISO] [GO:0009897 "external side
of plasma membrane" evidence=IEA;ISO] [GO:0014061 "regulation of
norepinephrine secretion" evidence=IEA;ISO] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=ISO] [GO:0015643 "toxic substance binding" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016324 "apical plasma
membrane" evidence=IEA;ISO] [GO:0017081 "chloride channel regulator
activity" evidence=ISO] [GO:0019228 "regulation of action potential
in neuron" evidence=IDA;IMP] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030317
"sperm motility" evidence=IEA;ISO] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0032094 "response to food" evidence=IEA;ISO]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IEA;ISO] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032691 "negative regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IEA;ISO] [GO:0032720 "negative regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035094 "response to
nicotine" evidence=ISO] [GO:0035095 "behavioral response to nicotine"
evidence=IEA;ISO] [GO:0042110 "T cell activation" evidence=IEA;ISO]
[GO:0042113 "B cell activation" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=ISO;IDA;IMP] [GO:0042221 "response
to chemical stimulus" evidence=ISO] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEP] [GO:0042698 "ovulation cycle"
evidence=ISO] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043198 "dendritic shaft" evidence=IDA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=ISO] [GO:0045766 "positive regulation of angiogenesis"
evidence=ISO] [GO:0048149 "behavioral response to ethanol"
evidence=IEA;ISO] [GO:0050727 "regulation of inflammatory response"
evidence=ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA;ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0051117 "ATPase binding" evidence=IDA] [GO:0060112 "generation of
ovulation cycle rhythm" evidence=IEA;ISO] [GO:0097110 "scaffold
protein binding" evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2348
GO:GO:0005737 GO:GO:0014069 GO:GO:0008144 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0043025
GO:GO:0032279 GO:GO:0042734 GO:GO:0007271 GO:GO:0045121 GO:GO:0030426
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG235631 GO:GO:0005892 GO:GO:0006816 CTD:1139 KO:K04809
GO:GO:0042416 GO:GO:0019228 EMBL:S53987 EMBL:L31619 EMBL:AY574256
IPI:IPI00607154 PIR:T01378 RefSeq:NP_036964.3 UniGene:Rn.9698
ProteinModelPortal:Q05941 SMR:Q05941 IntAct:Q05941 STRING:Q05941
PhosphoSite:Q05941 GeneID:25302 KEGG:rno:25302 UCSC:RGD:2348
BindingDB:Q05941 ChEMBL:CHEMBL4980 NextBio:606083 ArrayExpress:Q05941
Genevestigator:Q05941 GermOnline:ENSRNOG00000010853 Uniprot:Q05941
Length = 502
Score = 493 (178.6 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 118/318 (37%), Positives = 176/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P RNEKFY CC EPY D+T+ +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---------LYNPDGSH 234
+S+ VTV+VL H P KM W + + + + L M+RP + P
Sbjct: 306 LSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCS 365
Query: 235 LADGPLIGGSG-----GSCKIHGHVSLSNI---------LTEAILSSSPQDDSKHLRPPA 280
LA L G+G G+ G L + + L+ SP D +HL A
Sbjct: 366 LASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCGRLACSPTHD-EHLMHGA 424
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
+ P + + VR+IA R QD+S ++ +WK+ A V+DRL L F++
Sbjct: 425 HP-SDGDPDLAKILEEVRYIANRFRCQDESE------VICSEWKFAACVVDRLCLMAFSV 477
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 478 FTIICTIGILMSAPNFVE 495
Score = 43 (20.2 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+N +F
Sbjct: 87 LQWNMSEYPGVKNVRF 102
>UNIPROTKB|F1M7L0 [details] [associations]
symbol:Chrna7 "Neuronal acetylcholine receptor subunit
alpha-7" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2348 GO:GO:0016021 GO:GO:0009897 GO:GO:0016324
GO:GO:0007613 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050728 GO:GO:0006897
GO:GO:0014061 GO:GO:0007271 GO:GO:0042391 GO:GO:0004889
GO:GO:0042113 GO:GO:0032720 GO:GO:0008306 GO:GO:0048149
GO:GO:0060112 GO:GO:0032691 GO:GO:0032715 GO:GO:0001988
GO:GO:0032225 GO:GO:0032094 GO:GO:0030317 GO:GO:0042110
IPI:IPI00324645 ProteinModelPortal:F1M7L0
Ensembl:ENSRNOT00000055925 ArrayExpress:F1M7L0 Uniprot:F1M7L0
Length = 531
Score = 493 (178.6 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 118/318 (37%), Positives = 176/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P RNEKFY CC EPY D+T+ +TMRR+TL+Y +N++IPC+ IS
Sbjct: 215 DISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLIS 274
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 275 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 334
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---------LYNPDGSH 234
+S+ VTV+VL H P KM W + + + + L M+RP + P
Sbjct: 335 LSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCS 394
Query: 235 LADGPLIGGSG-----GSCKIHGHVSLSNI---------LTEAILSSSPQDDSKHLRPPA 280
LA L G+G G+ G L + + L+ SP D +HL A
Sbjct: 395 LASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCGRLACSPTHD-EHLMHGA 453
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
+ P + + VR+IA R QD+S ++ +WK+ A V+DRL L F++
Sbjct: 454 HP-SDGDPDLAKILEEVRYIANRFRCQDESE------VICSEWKFAACVVDRLCLMAFSV 506
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 507 FTIICTIGILMSAPNFVE 524
Score = 43 (20.2 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+N +F
Sbjct: 87 LQWNMSEYPGVKNVRF 102
>UNIPROTKB|F1M9W0 [details] [associations]
symbol:Chrna7 "Neuronal acetylcholine receptor subunit
alpha-7" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2348 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 IPI:IPI00607154
ProteinModelPortal:F1M9W0 Ensembl:ENSRNOT00000051883
ArrayExpress:F1M9W0 Uniprot:F1M9W0
Length = 502
Score = 493 (178.6 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 118/318 (37%), Positives = 176/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P RNEKFY CC EPY D+T+ +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---------LYNPDGSH 234
+S+ VTV+VL H P KM W + + + + L M+RP + P
Sbjct: 306 LSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCS 365
Query: 235 LADGPLIGGSG-----GSCKIHGHVSLSNI---------LTEAILSSSPQDDSKHLRPPA 280
LA L G+G G+ G L + + L+ SP D +HL A
Sbjct: 366 LASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCGRLACSPTHD-EHLMHGA 424
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
+ P + + VR+IA R QD+S ++ +WK+ A V+DRL L F++
Sbjct: 425 HP-SDGDPDLAKILEEVRYIANRFRCQDESE------VICSEWKFAACVVDRLCLMAFSV 477
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 478 FTIICTIGILMSAPNFVE 495
Score = 43 (20.2 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+N +F
Sbjct: 87 LQWNMSEYPGVKNVRF 102
>UNIPROTKB|F1RKU9 [details] [associations]
symbol:CHRNA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035095 "behavioral response to nicotine" evidence=IEA]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 OMA:WANILIP
EMBL:CT967296 Ensembl:ENSSSCT00000001957 Uniprot:F1RKU9
Length = 496
Score = 433 (157.5 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 80/163 (49%), Positives = 118/163 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ + + +CC PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 165 VDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPY--ITYSFVIKRLPLFYTLFLIIPCIGL 222
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ GEK+ L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 223 SFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 282
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAPWV+++F+ LP++L M+
Sbjct: 283 TLSIMVTVFAINIHHRSSATHNAMAPWVRKIFLHKLPKLLCMQ 325
Score = 102 (41.0 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 319 VKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
V EDWK++A VLDR+FLW F L + G+ G+ + P +Y
Sbjct: 441 VVEDWKFIAQVLDRMFLWTFLLVSIVGSLGLFV--PVIY 477
>ZFIN|ZDB-GENE-030102-4 [details] [associations]
symbol:chrnb3b "cholinergic receptor, nicotinic, beta
polypeptide 3b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-030102-4 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00620000087732 eggNOG:NOG252943
KO:K04814 OrthoDB:EOG40VVPK EMBL:CU459160 EMBL:BC163409
EMBL:BC163411 EMBL:AB087185 IPI:IPI00504956 RefSeq:NP_775394.1
UniGene:Dr.84843 SMR:Q8AV68 Ensembl:ENSDART00000050037
GeneID:317643 KEGG:dre:317643 CTD:317643 InParanoid:Q8AV68
OMA:HYPELAP NextBio:20807126 Uniprot:Q8AV68
Length = 462
Score = 430 (156.4 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 86/163 (52%), Positives = 118/163 (72%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD S+F+ + EW+IL + + PY IT++ ++R LFYT+ +IIPC+G+
Sbjct: 192 VDRSDFFDNGEWEILSATGHKGSRRDGHYSYPY--ITYSFILKRLPLFYTLFLIIPCLGL 249
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKV+LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 250 SFLTVLVFYLPSDEGEKVSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 309
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H M+PWV+ +F+Q LP +L MR
Sbjct: 310 TLSIIVTVFVINVHHRSSATYHPMSPWVRTLFLQRLPDLLCMR 352
Score = 105 (42.0 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIF-TLAVLG 344
VR+I+ H + KE + V +DWK+VA VLDR+FLW F T++VLG
Sbjct: 399 VRYISRHIK------KEHFIREVVQDWKFVAQVLDRIFLWAFLTVSVLG 441
>UNIPROTKB|P30532 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=NAS;TAS] [GO:0015276 "ligand-gated ion channel
activity" evidence=TAS] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IC] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0035095 "behavioral response to nicotine"
evidence=IMP] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0006810 "transport" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0030425
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GO:GO:0005892 GO:GO:0015464 MIM:612052 CTD:1138 eggNOG:NOG267611
KO:K04807 OMA:WANILIP OrthoDB:EOG41JZC6 EMBL:M83712 EMBL:U62434
EMBL:Y08419 EMBL:AJ306481 EMBL:AJ306482 EMBL:AJ306483 EMBL:AJ306484
EMBL:AJ306485 EMBL:AJ306486 EMBL:BC033639 IPI:IPI00295323
PIR:A38223 RefSeq:NP_000736.2 UniGene:Hs.1614 UniGene:Hs.719767
ProteinModelPortal:P30532 SMR:P30532 STRING:P30532
PhosphoSite:P30532 DMDM:2506126 PaxDb:P30532 PRIDE:P30532
DNASU:1138 Ensembl:ENST00000299565 GeneID:1138 KEGG:hsa:1138
UCSC:uc002bdy.3 GeneCards:GC15P078857 HGNC:HGNC:1959 MIM:118505
neXtProt:NX_P30532 PharmGKB:PA26491 InParanoid:P30532
PhylomeDB:P30532 BindingDB:P30532 ChEMBL:CHEMBL2454 GenomeRNAi:1138
NextBio:4734 ArrayExpress:P30532 Bgee:P30532 CleanEx:HS_CHRNA5
Genevestigator:P30532 Uniprot:P30532
Length = 468
Score = 425 (154.7 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 79/163 (48%), Positives = 117/163 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ + + +CC PY +T++ ++R LFYT+ +IIPC+G+
Sbjct: 207 VDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPY--VTYSFVIKRLPLFYTLFLIIPCIGL 264
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ GEK+ L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 265 SFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 324
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI VTV +N+H RS TH MAP V+++F+ LP++L MR
Sbjct: 325 TLSIMVTVFAINIHHRSSSTHNAMAPLVRKIFLHTLPKLLCMR 367
Score = 110 (43.8 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+R+I H M+++ +E V EDWK++A VLDR+FLW F + G+ G+ + P +
Sbjct: 400 IRYITRHI-MKENDVRE-----VVEDWKFIAQVLDRMFLWTFLFVSIVGSLGLFV--PVI 451
Query: 357 Y 357
Y
Sbjct: 452 Y 452
>WB|WBGene00006765 [details] [associations]
symbol:unc-29 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0046662 "regulation of oviposition"
evidence=IMP] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IDA] [GO:0043051 "regulation of pharyngeal pumping"
evidence=IGI] [GO:0045202 "synapse" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0007274
GO:GO:0043005 GO:GO:0040011 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:X83888 EMBL:U81144
EMBL:Z80220 PIR:S68587 PIR:T24695 RefSeq:NP_492399.1
ProteinModelPortal:P48181 SMR:P48181 MINT:MINT-3383569
STRING:P48181 PaxDb:P48181 EnsemblMetazoa:T08G11.5.1
EnsemblMetazoa:T08G11.5.2 GeneID:172703 KEGG:cel:CELE_T08G11.5
UCSC:T08G11.5 CTD:172703 WormBase:T08G11.5 eggNOG:NOG267576
InParanoid:P48181 OMA:NETSAYY NextBio:876657 GO:GO:0015464
GO:GO:0046662 GO:GO:0043051 Uniprot:P48181
Length = 493
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 117/300 (39%), Positives = 184/300 (61%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD+SE+ S WD+++VPA K I F + +RRKTLFYTV +IIP + +
Sbjct: 193 VDVSEYSASSIWDVIDVPASLVNKRSR--------IEFQVRIRRKTLFYTVVLIIPTVLM 244
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
+FL++ F+LP+DSGEK+TL+IS+L+S+ VF LLV +I+PPTS +PL+ KYL+ +L
Sbjct: 245 AFLSMAVFFLPTDSGEKITLTISVLLSIVVFLLLVSKILPPTSSTIPLMAKYLLLTFVLN 304
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADG---- 238
I+I VTV+++NV+FR P+TH+M WV+ VF+QFLP+++ M+RP + S + G
Sbjct: 305 VITILVTVIIINVYFRGPRTHRMPQWVRVVFLQFLPKLVCMKRPKSASERSAVRSGMAQL 364
Query: 239 PLIGGSGGSCKIHGHVSLS-NILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCV 297
P +G S H + S + T I +++ + S + P + A R+ +
Sbjct: 365 PGVGQFTLSPSAHHPLCPSADDRTTTIRNTASNETSAYY--PLSTDAL------RAIDAI 416
Query: 298 RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
+I EH + +D+ K ++DWKYVA+++DRL L++F +GGT GI+ AP ++
Sbjct: 417 EYITEHLK-RDEQHKS-----FRDDWKYVAMIIDRLLLYVFFGITVGGTCGILFSAPHVF 470
>MGI|MGI:99779 [details] [associations]
symbol:Chrna7 "cholinergic receptor, nicotinic, alpha
polypeptide 7" species:10090 "Mus musculus" [GO:0000187 "activation
of MAPK activity" evidence=ISO] [GO:0001540 "beta-amyloid binding"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0001988 "positive regulation of heart rate involved in
baroreceptor response to decreased systemic arterial blood
pressure" evidence=IMP] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IDA;IMP]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IMP] [GO:0006812 "cation transport" evidence=IDA;IMP]
[GO:0006816 "calcium ion transport" evidence=ISO] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISO] [GO:0006897
"endocytosis" evidence=IMP] [GO:0007165 "signal transduction"
evidence=ISO] [GO:0007271 "synaptic transmission, cholinergic"
evidence=ISO;IMP] [GO:0007613 "memory" evidence=IMP] [GO:0008144
"drug binding" evidence=ISO] [GO:0008179 "adenylate cyclase
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008306 "associative learning"
evidence=IGI;IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0014061 "regulation of norepinephrine secretion"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0015464 "acetylcholine receptor activity" evidence=ISO]
[GO:0015643 "toxic substance binding" evidence=ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0017081 "chloride channel regulator activity" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030317 "sperm
motility" evidence=IMP] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0032094 "response to food" evidence=IMP]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IMP] [GO:0032279 "asymmetric synapse" evidence=ISO]
[GO:0032691 "negative regulation of interleukin-1 beta production"
evidence=IMP] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IMP] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISO;IMP] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IDA;IMP] [GO:0035094
"response to nicotine" evidence=ISO;IMP] [GO:0035095 "behavioral
response to nicotine" evidence=IGI] [GO:0042110 "T cell activation"
evidence=IMP] [GO:0042113 "B cell activation" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0042221
"response to chemical stimulus" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO;IMP] [GO:0042698
"ovulation cycle" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISO] [GO:0043198 "dendritic
shaft" evidence=ISO] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IMP] [GO:0045766 "positive regulation of angiogenesis"
evidence=ISO] [GO:0048149 "behavioral response to ethanol"
evidence=IMP] [GO:0050727 "regulation of inflammatory response"
evidence=IMP] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050890 "cognition" evidence=ISO]
[GO:0051117 "ATPase binding" evidence=ISO] [GO:0060112 "generation
of ovulation cycle rhythm" evidence=IMP] [GO:0097110 "scaffold
protein binding" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:99779 GO:GO:0005737
GO:GO:0014069 GO:GO:0009897 GO:GO:0016324 GO:GO:0008144
GO:GO:0043198 GO:GO:0007613 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0043025
GO:GO:0050728 GO:GO:0006897 GO:GO:0032279 GO:GO:0042734
GO:GO:0014061 GO:GO:0007271 GO:GO:0045121 GO:GO:0042391
GO:GO:0030426 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG235631 GO:GO:0005892 GO:GO:0042113
CTD:1139 KO:K04809 OrthoDB:EOG483D4K GO:GO:0032720 GO:GO:0008306
GO:GO:0048149 GO:GO:0060112 GO:GO:0032691 GO:GO:0032715
GO:GO:0001988 GO:GO:0032225 GO:GO:0032094 GO:GO:0030317
GO:GO:0042110 EMBL:L37663 IPI:IPI00115489 PIR:A57175
RefSeq:NP_031416.3 UniGene:Mm.113464 ProteinModelPortal:P49582
SMR:P49582 DIP:DIP-48732N STRING:P49582 PhosphoSite:P49582
PRIDE:P49582 Ensembl:ENSMUST00000032738 GeneID:11441 KEGG:mmu:11441
InParanoid:P49582 OMA:KESCQGP BindingDB:P49582 ChEMBL:CHEMBL3365
NextBio:278744 Bgee:P49582 Genevestigator:P49582
GermOnline:ENSMUSG00000030525 GO:GO:0042416 GO:GO:0019228
Uniprot:P49582
Length = 502
Score = 489 (177.2 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 117/318 (36%), Positives = 175/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P RNEKFY CC EPY D+T+ +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---------LYNPDGSH 234
+S+ VTV+VL H P KM W + + + + L M+RP + P
Sbjct: 306 LSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCS 365
Query: 235 LADGPLIGGSG-----GSCKIHGHVSLSNI---------LTEAILSSSPQDDSKHLRPPA 280
LA L G+G G+ G L + + L+ SP D +HL
Sbjct: 366 LASVELSAGAGPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCGRLACSPTHD-EHLMHGT 424
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
+ P + + VR+IA R QD+S ++ +WK+ A V+DRL L F++
Sbjct: 425 HP-SDGDPDLAKILEEVRYIANRFRCQDESE------VICSEWKFAACVVDRLCLMAFSV 477
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 478 FTIICTIGILMSAPNFVE 495
Score = 43 (20.2 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+N +F
Sbjct: 87 LQWNMSEYPGVKNVRF 102
>WB|WBGene00000045 [details] [associations]
symbol:acr-6 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 EMBL:FO081700 RefSeq:NP_491354.2
ProteinModelPortal:Q9N4M3 SMR:Q9N4M3 EnsemblMetazoa:ZK973.5
GeneID:191479 KEGG:cel:CELE_ZK973.5 UCSC:ZK973.5 CTD:191479
WormBase:ZK973.5 eggNOG:NOG327967 OMA:NYQESVE NextBio:949304
Uniprot:Q9N4M3
Length = 551
Score = 430 (156.4 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 81/167 (48%), Positives = 124/167 (74%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
ER GVDLS + SVEWD+L V +R++K+Y CCD P +DIT+ + +RRK LFYTVN+IIP
Sbjct: 197 ER-GVDLSNYQESVEWDLLSVEGIRHKKWYPCCDYPSIDITYYLHIRRKKLFYTVNMIIP 255
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+ ++ +T+ FYLP +S +K+ L IS+L++L ++FL++++IIPPTS+V PL+ KYL F
Sbjct: 256 CVCLASMTLWVFYLPCESHQKIQLCISVLVALTLYFLMLIDIIPPTSIVTPLILKYLSFT 315
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRR 225
MI+V++S+ TV + N+H+R+ M +VK FI+ L + L++ R
Sbjct: 316 MIMVALSVTCTVFIQNIHYRA-YYQPMPRFVKHWFIEKLGKKLLISR 361
Score = 102 (41.0 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 311 TKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVPI 363
T E + DW++V+LV+DR+ L IF+ + GT I AP++ D+R PI
Sbjct: 495 TDERRAQEAEADWQFVSLVIDRMLLIIFSFTITIGTILTIFSAPTMRDNREPI 547
>UNIPROTKB|P26152 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 CTD:1138 eggNOG:NOG267611 KO:K04807
OrthoDB:EOG41JZC6 EMBL:J05642 IPI:IPI00571201 PIR:B39218
RefSeq:NP_989746.1 UniGene:Gga.26200 ProteinModelPortal:P26152
SMR:P26152 GeneID:386577 KEGG:gga:386577 InParanoid:P26152
NextBio:20813940 Uniprot:P26152
Length = 454
Score = 426 (155.0 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 78/163 (47%), Positives = 117/163 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+I+ + + CC P+ +T++ +RR LFYT+ +IIPC+G+
Sbjct: 193 VDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPF--VTYSFIIRRLPLFYTLFLIIPCIGL 250
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPS+ EK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 251 SFLTVLVFYLPSNEAEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFV 310
Query: 183 SISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
++SI +TV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 311 TLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 353
Score = 106 (42.4 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+R+I H M+++ +E V EDWK++A VLDR+FLW F L + G+ ++L P +
Sbjct: 386 IRYITRHV-MKENEVRE-----VVEDWKFIAQVLDRMFLWAFLLVSIIGS--LVLFIPVI 437
Query: 357 Y 357
+
Sbjct: 438 H 438
>ZFIN|ZDB-GENE-040108-3 [details] [associations]
symbol:chrna7 "cholinergic receptor, nicotinic, alpha
polypeptide 7" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-040108-3 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 GO:GO:0005892 EMBL:BX649433
IPI:IPI00817270 ProteinModelPortal:F1QM95
Ensembl:ENSDART00000134733 ArrayExpress:F1QM95 Bgee:F1QM95
Uniprot:F1QM95
Length = 510
Score = 435 (158.2 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 78/168 (46%), Positives = 115/168 (68%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
+ + D++ + + EWD++EVP RNE+FY CC EPY D+TF + MRR+TL+Y +N++IP
Sbjct: 182 QMIDADITGYIANGEWDLVEVPGRRNERFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLIP 241
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+ IS L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y
Sbjct: 242 CVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATT 301
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
M++V +S+ TV VL H+ P+ KM W + V + + L M+RP
Sbjct: 302 MVIVGLSVIATVWVLQYHYHDPEGGKMPKWTRVVLLNWCAWFLRMKRP 349
Score = 95 (38.5 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
VR+I++ R QD+ E T V +WK+ A V+DRL L F+L + T GI++ AP+
Sbjct: 447 VRYISKRFRDQDE---EDT---VCNEWKFAASVIDRLCLMAFSLFTILCTIGILMSAPNF 500
Query: 357 YD 358
+
Sbjct: 501 VE 502
>UNIPROTKB|F1NKI5 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087732 GO:GO:0051899 EMBL:AADN02066018
EMBL:AADN02066017 IPI:IPI00820493 Ensembl:ENSGALT00000024818
Uniprot:F1NKI5
Length = 325
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 90/162 (55%), Positives = 127/162 (78%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD++EF+ + EW+I++ +++ Y CC+E Y DIT++ +RR +FYT+N+IIPC+ I
Sbjct: 164 VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFI 223
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEKVTL IS+L+SL VF L++ E IP TSLV+PL+G+YL+F MI V
Sbjct: 224 SFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFV 283
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR 224
++SI +TV VLN+H+R+P TH M WVK VF+ LP++L+M+
Sbjct: 284 TLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQ 325
>ZFIN|ZDB-GENE-060503-606 [details] [associations]
symbol:si:ch211-39a7.1 "si:ch211-39a7.1"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-060503-606 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 eggNOG:NOG235631
OrthoDB:EOG483D4K EMBL:CR450791 IPI:IPI00496227
RefSeq:NP_001038562.1 UniGene:Dr.104111 Ensembl:ENSDART00000138971
GeneID:566141 KEGG:dre:566141 InParanoid:Q1L8Y9 OMA:EVRYMAD
NextBio:20888052 Uniprot:Q1L8Y9
Length = 589
Score = 437 (158.9 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 80/163 (49%), Positives = 115/163 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ VP RNE FY CC EPY D+TF +T+RR+TL+Y +N++IPC+ +S
Sbjct: 185 DISGYMPNGEWDLVGVPGTRNELFYDCCKEPYPDVTFVVTIRRRTLYYALNLLIPCVLLS 244
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
+T+L F LP+DSGEK++L I++L+SL VF LLV EI+P TS +PL+G+Y MI+V
Sbjct: 245 SMTLLIFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSIPLIGQYFASIMIIVG 304
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+S+ TVVVL H P M WV+ V +Q++ L M+RP
Sbjct: 305 MSVIATVVVLQYHHHDPNGGNMPKWVQLVLLQWVAWFLRMKRP 347
Score = 90 (36.7 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
VR++A+ R QD++ ES V E WK+ A V+DRL L F++ + T I++ AP+
Sbjct: 527 VRYVADRFRGQDEN--ES----VTEQWKFAAAVIDRLCLVAFSVFNIICTISILMSAPNF 580
Query: 357 YD 358
+
Sbjct: 581 VE 582
>WB|WBGene00000055 [details] [associations]
symbol:acr-16 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0040011 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:X83887
EMBL:FO080489 EMBL:AY523511 PIR:S68588 RefSeq:NP_001023847.1
RefSeq:NP_505207.1 UniGene:Cel.18045 ProteinModelPortal:P48180
SMR:P48180 PaxDb:P48180 EnsemblMetazoa:F25G6.3a GeneID:179235
KEGG:cel:CELE_F25G6.3 UCSC:F25G6.3a.1 CTD:179235 WormBase:F25G6.3a
WormBase:F25G6.3b eggNOG:NOG235631 InParanoid:P48180 KO:K05312
OMA:VANHSEP NextBio:904496 GO:GO:0042995 Uniprot:P48180
Length = 498
Score = 431 (156.8 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 79/168 (47%), Positives = 115/168 (68%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 121
G D+SE+ + EW + RNEKFY CC EPY D+ F + MRR+TL+Y N+I+PC+
Sbjct: 183 GFDISEYISNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCIL 242
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMIL 181
+ +T+L F LP D+GEK+TL I++L+S+ F +V E+ PPTS VPLLG + MI+
Sbjct: 243 TTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIV 302
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN 229
V+ S TV VLN+H+R+P+TH M PW + + + ++P IL M+RP +N
Sbjct: 303 VTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHN 350
Score = 96 (38.9 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 248 CKIHGHV---SLSNILTEAILSSSPQDD-SKHLRPPAFSHAQCPPVMHRSCFCVRFIAEH 303
C+++ ++ S+SN LT L S P S + S ++HR ++ + +
Sbjct: 392 CRLNQYIMTQSVSNGLTS--LGSIPSTMISSNGTTTDVSQQATLLILHRIYHELKIVTK- 448
Query: 304 TRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
RM + +E +WK+ A+V+DRL L++FT+ ++ T GI AP L
Sbjct: 449 -RMIEGDKEEQAC----NNWKFAAMVVDRLCLYVFTIFIIVSTIGIFWSAPYL 496
>FB|FBgn0028875 [details] [associations]
symbol:nAcRalpha-34E "nicotinic Acetylcholine Receptor alpha
34E" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;IDA;NAS] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISS;IDA;NAS] [GO:0006811 "ion transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014134 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042166 GO:GO:0004889
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312
GO:GO:0005892 RefSeq:NP_001246027.1 RefSeq:NP_995707.2
RefSeq:NP_995708.1 UniGene:Dm.5939 HSSP:P22770 SMR:Q7KT97
STRING:Q7KT97 EnsemblMetazoa:FBtr0080594 EnsemblMetazoa:FBtr0300594
EnsemblMetazoa:FBtr0309867 GeneID:34826 KEGG:dme:Dmel_CG32975
UCSC:CG32975-RB CTD:34826 FlyBase:FBgn0028875 InParanoid:Q7KT97
OMA:VDDDELW OrthoDB:EOG4R4XHV GenomeRNAi:34826 NextBio:790405
Uniprot:Q7KT97
Length = 808
Score = 438 (159.2 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 81/169 (47%), Positives = 119/169 (70%)
Query: 58 RERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIII 117
++ G D+S + ++ EW++L VP RNE +Y CC EPY+DITF I +RR+TL+Y N+II
Sbjct: 470 QDETGGDISSYVLNGEWELLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLII 529
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ I+ + +L F LP DSGEK++L ++IL+SL VF +V E +P TS VPLLG Y
Sbjct: 530 PCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNC 589
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
M +V+ S+ T+++LN H R+ TH+M+ W++ VF+ +LP IL M RP
Sbjct: 590 IMFMVASSVVSTILILNYHHRNADTHEMSEWIRIVFLCWLPWILRMSRP 638
Score = 102 (41.0 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
+RFI + R +DD + + DWK+ A+V+DRL L IFT+ + T ++L AP +
Sbjct: 752 IRFITDQLR-KDDECND-----IANDWKFAAMVVDRLCLIIFTMFTILATIAVLLSAPHI 805
>UNIPROTKB|F1NHP4 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 IPI:IPI00577533
GeneTree:ENSGT00620000087732 EMBL:AADN02018409 EMBL:AADN02018408
Ensembl:ENSGALT00000026738 Uniprot:F1NHP4
Length = 388
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 97/164 (59%), Positives = 120/164 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VDL +++ S EW I+ N K Y CC E Y DITF +RR LFYT+N+IIPC+ I
Sbjct: 182 VDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTINLIIPCLLI 241
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S LTVL FYLPSD GEK+TL IS+L+SL VF LL+ EIIP TSLV+PL+G+YL+F MI V
Sbjct: 242 SCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFV 301
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++SI +TV VLNVH RSP TH M WV+ F+ F+PR L M+RP
Sbjct: 302 TLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRP 345
>ZFIN|ZDB-GENE-060811-1 [details] [associations]
symbol:chrnb1l "cholinergic receptor, nicotinic, beta
1 (muscle) like" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-060811-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 GeneTree:ENSGT00620000087691
EMBL:BX649313 IPI:IPI01024588 ProteinModelPortal:F8W4S9
Ensembl:ENSDART00000149144 Bgee:F8W4S9 Uniprot:F8W4S9
Length = 489
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 114/307 (37%), Positives = 174/307 (56%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
+D + F + EW I P+ +N + D+ Y DITF + + RK LFY +NII+PC+
Sbjct: 193 IDENAFTENGEWQICHKPSRKNVQ-----DDLYEDITFYLIIERKPLFYVINIIVPCILT 247
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S L + FYLP +GEK+TLSIS+LI+L VF LL+ + +P TSL +P++ Y++F MILV
Sbjct: 248 SVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLADKVPETSLAIPIIVNYVMFTMILV 307
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPL-YNPDGSHLADGPLI 241
+ S+ ++VVVLN+H R+P TH M WV++VFI LPR L + RP P + +
Sbjct: 308 TFSVILSVVVLNLHHRTPSTHHMPGWVRKVFINLLPRYLGVLRPTPEEPVEEEPKENVPM 367
Query: 242 GGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQ--C---PPVMHRSCFC 296
G G S + G + I E ++ + ++ FS++ C PP + +
Sbjct: 368 GCLGNSLRPGGEYFIRKINPELVMPWRGSHNESTVKLQRFSNSDNYCLILPPNLKSAIAA 427
Query: 297 VRFIAEHTRMQD-DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPS 355
+ +++E + QD D T + +DW+Y+A+VLDRLFLW+F + GT + L A
Sbjct: 428 ITYMSEQLKKQDVDDT-------MTDDWQYIAVVLDRLFLWLFVVITTLGTLTMFLDASF 480
Query: 356 LYDDRVP 362
Y P
Sbjct: 481 NYTPDQP 487
>UNIPROTKB|Q866A2 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9544 "Macaca mulatta" [GO:0000187 "activation of
MAPK activity" evidence=ISS] [GO:0001540 "beta-amyloid binding"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0006816 "calcium ion transport" evidence=ISS] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0015643 "toxic
substance binding" evidence=ISS] [GO:0017081 "chloride channel
regulator activity" evidence=ISS] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=ISS] [GO:0035094
"response to nicotine" evidence=ISS] [GO:0042166 "acetylcholine
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0045766 "positive regulation of
angiogenesis" evidence=ISS] [GO:0050890 "cognition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0042803
GO:GO:0009897 GO:GO:0016324 GO:GO:0008284 GO:GO:0007613
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0050890 GO:GO:0050728 GO:GO:0001666
GO:GO:0006897 GO:GO:0014061 GO:GO:0007271 GO:GO:0000187
GO:GO:0045766 GO:GO:0042391 GO:GO:0001540 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 GO:GO:0005892
GO:GO:0015464 GO:GO:0035094 GO:GO:0042113 GO:GO:0006816 CTD:1139
KO:K04809 OrthoDB:EOG483D4K GO:GO:0017081 GO:GO:0015643
GO:GO:0006874 GO:GO:0032720 OMA:AGPPATN EMBL:AF486623
RefSeq:NP_001028055.1 UniGene:Mmu.3473 ProteinModelPortal:Q866A2
SMR:Q866A2 Ensembl:ENSMMUT00000031766 GeneID:574230 KEGG:mcc:574230
InParanoid:Q866A2 NextBio:19985208 GO:GO:0008306 GO:GO:0048149
GO:GO:0060112 GO:GO:0032691 GO:GO:0032715 GO:GO:0001988
GO:GO:0032225 GO:GO:0032094 GO:GO:0030317 GO:GO:0042110
Uniprot:Q866A2
Length = 502
Score = 475 (172.3 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 120/322 (37%), Positives = 181/322 (56%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + S EWD++ +P R+EKFY CC EPY D+TF +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISGYIPSGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP----------------- 226
+S+ VTV+VL H P KM W + + + + L M+RP
Sbjct: 306 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 365
Query: 227 LYNPDGSHLADGPLIGGS----G--GSCKIHGHVSLSNILTEAILSSSPQDDSKHL---- 276
L + + S +A P G+ G G +H + + + ++ SP D +HL
Sbjct: 366 LASVEMSAVAPPPASNGNLLYIGFRGLDGMHCAPTPDSGVVCGRMACSPTHD-EHLLHGG 424
Query: 277 RPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLW 336
+PP + P + + VR+IA R QD+S E+ V +WK+ A V+DRL L
Sbjct: 425 QPP-----EGDPDLAKILEEVRYIANRFRCQDES--EA----VCSEWKFAACVVDRLCLM 473
Query: 337 IFTLAVLGGTAGIILQAPSLYD 358
F++ + T GI++ AP+ +
Sbjct: 474 AFSVFTIICTIGILMSAPNFVE 495
Score = 39 (18.8 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+ +F
Sbjct: 87 LQWNVSEYPGVKTVRF 102
>UNIPROTKB|E7ENE5 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
HGNC:HGNC:1955 EMBL:AC018890 IPI:IPI00916135
ProteinModelPortal:E7ENE5 SMR:E7ENE5 Ensembl:ENST00000409219
UCSC:uc002ujf.4 ArrayExpress:E7ENE5 Bgee:E7ENE5 Uniprot:E7ENE5
Length = 377
Score = 440 (159.9 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 85/161 (52%), Positives = 114/161 (70%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y+CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT L FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 246 SFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 305
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM 223
SI +TV+V+N H RSP TH M WV++ ++ +VM
Sbjct: 306 IASIIITVIVINTHHRSPSTHVMPNWVRKAAAEWKYVAMVM 346
Score = 73 (30.8 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 322 DWKYVALVLDRLFLWIFTLAVLGGTAGI 349
+WKYVA+V+D + L +F L + GT +
Sbjct: 338 EWKYVAMVMDHILLGVFMLVCIIGTLAV 365
>UNIPROTKB|P36544 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0000187 "activation of MAPK activity" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA;IMP] [GO:0006811 "ion
transport" evidence=NAS] [GO:0050890 "cognition" evidence=NAS;IMP]
[GO:0015643 "toxic substance binding" evidence=IDA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IDA;IMP] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0045766
"positive regulation of angiogenesis" evidence=IMP] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0001666
"response to hypoxia" evidence=IDA] [GO:0035094 "response to
nicotine" evidence=IDA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IDA] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0001540
"beta-amyloid binding" evidence=IPI] [GO:0007613 "memory"
evidence=NAS] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0017081 "chloride channel regulator activity" evidence=IDA]
[GO:0042221 "response to chemical stimulus" evidence=IDA]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0042803 GO:GO:0008284 GO:GO:0007613
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0001666
GO:GO:0000187 GO:GO:0045766 GO:GO:0001540 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
DrugBank:DB00184 eggNOG:NOG235631 GO:GO:0005892 GO:GO:0015464
GO:GO:0035094 GO:GO:0006816 DrugBank:DB01273 CTD:1139 KO:K04809
OrthoDB:EOG483D4K GO:GO:0017081 GO:GO:0015643 GO:GO:0006874
GO:GO:0032720 EMBL:X70297 EMBL:U40583 EMBL:U62436 EMBL:Y08420
EMBL:AF385585 EMBL:AK292069 EMBL:AK294229 EMBL:AC004460
EMBL:AC009562 EMBL:AC012236 EMBL:AC021316 EMBL:AC026150
EMBL:AC026951 EMBL:AC058803 EMBL:AC068448 EMBL:AC079969
EMBL:AC087481 EMBL:AC090829 EMBL:AC091057 EMBL:AC104266
EMBL:AC104759 EMBL:BC037571 EMBL:BC101345 EMBL:L25827 EMBL:Z23141
EMBL:AF332758 IPI:IPI00003858 IPI:IPI00942337 PIR:G02259 PIR:I37185
RefSeq:NP_000737.1 RefSeq:NP_001177384.1 RefSeq:NP_683709.1
UniGene:Hs.510853 UniGene:Hs.511772 UniGene:Hs.713151
ProteinModelPortal:P36544 SMR:P36544 IntAct:P36544 STRING:P36544
TCDB:1.A.9.1.1 PhosphoSite:P36544 DMDM:2506127 PRIDE:P36544
Ensembl:ENST00000306901 Ensembl:ENST00000454250
Ensembl:ENST00000455693 GeneID:1139 GeneID:89832 KEGG:hsa:1139
KEGG:hsa:89832 UCSC:uc001zft.3 CTD:89832 GeneCards:GC15P032322
HGNC:HGNC:1960 HPA:CAB033624 HPA:HPA029422 MIM:118511
neXtProt:NX_P36544 Orphanet:199318 PharmGKB:PA114 PharmGKB:PA26483
InParanoid:P36544 OMA:AGPPATN PhylomeDB:P36544 BindingDB:P36544
ChEMBL:CHEMBL2492 GenomeRNAi:1139 NextBio:4738 ArrayExpress:P36544
Bgee:P36544 CleanEx:HS_CHRNA7 Genevestigator:P36544
GermOnline:ENSG00000175344 Uniprot:P36544
Length = 502
Score = 470 (170.5 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 118/322 (36%), Positives = 181/322 (56%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P R+E+FY CC EPY D+TF +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP----------------- 226
+S+ VTV+VL H P KM W + + + + L M+RP
Sbjct: 306 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 365
Query: 227 LYNPDGSHLADGPLIGGS----G--GSCKIHGHVSLSNILTEAILSSSPQDDSKHL---- 276
L + + S +A P G+ G G +H + + + ++ SP D +HL
Sbjct: 366 LASVEMSAVAPPPASNGNLLYIGFRGLDGVHCVPTPDSGVVCGRMACSPTHD-EHLLHGG 424
Query: 277 RPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLW 336
+PP + P + + VR+IA R QD+S E+ V +WK+ A V+DRL L
Sbjct: 425 QPP-----EGDPDLAKILEEVRYIANRFRCQDES--EA----VCSEWKFAACVVDRLCLM 473
Query: 337 IFTLAVLGGTAGIILQAPSLYD 358
F++ + T GI++ AP+ +
Sbjct: 474 AFSVFTIICTIGILMSAPNFVE 495
Score = 39 (18.8 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+ +F
Sbjct: 87 LQWNVSEYPGVKTVRF 102
>UNIPROTKB|F1P4Y5 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9031 "Gallus gallus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042391
"regulation of membrane potential" evidence=IEA] [GO:0048149
"behavioral response to ethanol" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0060112 "generation of ovulation cycle rhythm" evidence=IEA]
[GO:0001988 "positive regulation of heart rate involved in
baroreceptor response to decreased systemic arterial blood
pressure" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0008306 "associative learning" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0014061
"regulation of norepinephrine secretion" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0032094 "response to food" evidence=IEA]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0032691 "negative regulation of interleukin-1
beta production" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0035095 "behavioral response to nicotine" evidence=IEA]
[GO:0042110 "T cell activation" evidence=IEA] [GO:0042113 "B cell
activation" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0009897 GO:GO:0045471
GO:GO:0016324 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0050728 GO:GO:0006897 GO:GO:0014061
GO:GO:0042391 GO:GO:0004889 GeneTree:ENSGT00630000089708
GO:GO:0035094 GO:GO:0042113 CTD:1139 KO:K04809 GO:GO:0032720
UniGene:Gga.4000 NextBio:20813529 GO:GO:0032691 GO:GO:0032715
GO:GO:0032225 GO:GO:0032094 GO:GO:0030317 GO:GO:0042110 OMA:KESCQGP
EMBL:AADN02040365 IPI:IPI01017261 RefSeq:NP_989512.2
Ensembl:ENSGALT00000006519 GeneID:374001 KEGG:gga:374001
Uniprot:F1P4Y5
Length = 502
Score = 464 (168.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 116/318 (36%), Positives = 176/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P R E FY CC EPY DITF +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------ 234
+S+ VTV+VL H P KM W + + + + L M+RP P H
Sbjct: 306 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 365
Query: 235 LADGPLIGGSGGSCK----IH-GHVSLSNI----LTEA--I---LSSSPQDDSKHLRPPA 280
L+ + SG C ++ G L + T++ I ++ SP ++ L
Sbjct: 366 LSSMEMNTVSGQQCSNGNMLYIGFRGLDGVHCTPTTDSGVICGRMTCSPTEEENLLHSGH 425
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
S P + + VR+IA R QD+ +E+ + +WK+ A V+DRL L F++
Sbjct: 426 PSEGD--PDLAKILEEVRYIANRFRDQDE--EEA----ICNEWKFAASVVDRLCLMAFSV 477
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 478 FTIICTIGILMSAPNFVE 495
Score = 45 (20.9 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+N +F
Sbjct: 87 LQWNVSEYPGVKNVRF 102
>UNIPROTKB|P22770 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050890 "cognition" evidence=ISS] [GO:0042166 "acetylcholine
binding" evidence=ISS] [GO:0000187 "activation of MAPK activity"
evidence=ISS] [GO:0001540 "beta-amyloid binding" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0006816 "calcium ion transport" evidence=ISS] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0015643 "toxic
substance binding" evidence=ISS] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=ISS] [GO:0035094
"response to nicotine" evidence=ISS] [GO:0045766 "positive
regulation of angiogenesis" evidence=ISS] [GO:0017081 "chloride
channel regulator activity" evidence=ISS] [GO:0042803 "protein
homodimerization activity" evidence=ISS] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0042803 GO:GO:0008284
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890
GO:GO:0001666 GO:GO:0000187 GO:GO:0045766 GO:GO:0001540
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG235631 GO:GO:0005892 GO:GO:0015464 GO:GO:0035094
GO:GO:0006816 OrthoDB:EOG483D4K GO:GO:0017081 GO:GO:0015643
GO:GO:0006874 GO:GO:0032720 EMBL:X68586 EMBL:X52295 EMBL:X68246
IPI:IPI00591091 PIR:JN0113 UniGene:Gga.4000 PDB:1KC4 PDB:1KL8
PDB:1OL3 PDB:1OL4 PDB:1OL8 PDB:1OL9 PDBsum:1KC4 PDBsum:1KL8
PDBsum:1OL3 PDBsum:1OL4 PDBsum:1OL8 PDBsum:1OL9
ProteinModelPortal:P22770 SMR:P22770 InParanoid:P22770
EvolutionaryTrace:P22770 NextBio:20813529 Uniprot:P22770
Length = 502
Score = 464 (168.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 116/318 (36%), Positives = 176/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P R E FY CC EPY DITF +TMRR+TL+Y +N++IPC+ IS
Sbjct: 186 DISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLNLLIPCVLIS 245
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 246 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------ 234
+S+ VTV+VL H P KM W + + + + L M+RP P H
Sbjct: 306 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 365
Query: 235 LADGPLIGGSGGSCK----IH-GHVSLSNI----LTEA--I---LSSSPQDDSKHLRPPA 280
L+ + SG C ++ G L + T++ I ++ SP ++ L
Sbjct: 366 LSSMEMNTVSGQQCSNGNMLYIGFRGLDGVHCTPTTDSGVICGRMTCSPTEEENLLHSGH 425
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
S P + + VR+IA R QD+ +E+ + +WK+ A V+DRL L F++
Sbjct: 426 PSEGD--PDLAKILEEVRYIANRFRDQDE--EEA----ICNEWKFAASVVDRLCLMAFSV 477
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 478 FTIICTIGILMSAPNFVE 495
Score = 45 (20.9 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+N +F
Sbjct: 87 LQWNVSEYPGVKNVRF 102
>UNIPROTKB|F1PU41 [details] [associations]
symbol:CHRNA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 OMA:AGPPATN EMBL:AAEX03002211
EMBL:AAEX03002212 EMBL:AAEX03002213 EMBL:AAEX03002214
EMBL:AAEX03002215 Ensembl:ENSCAFT00000016296 Uniprot:F1PU41
Length = 440
Score = 469 (170.2 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 115/318 (36%), Positives = 175/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P R+EKFY CC EPY D+TF +T+RR+TL+Y +N++IPC+ IS
Sbjct: 124 DISGYIPNGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTIRRRTLYYGLNLLIPCVLIS 183
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 184 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 243
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------ 234
+S+ VTV+VL H P KM W + + + + L M+RP P H
Sbjct: 244 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 303
Query: 235 LAD-------GP-------LIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPA 280
LA GP L G G +H + + + ++ SP D +HL
Sbjct: 304 LASVEMSAVAGPPTTNGNLLYIGFRGLDGVHCAPTPDSGVVCGRMACSPTHD-EHLLHGG 362
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
++ P + + +R+IA R QD+S + +WK+ A V+DRL L F++
Sbjct: 363 -QPSEGDPDLAKILEEIRYIANRFRCQDESDA------ICSEWKFAACVVDRLCLMAFSV 415
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 416 FTIICTIGILMSAPNFVE 433
Score = 37 (18.1 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 72 VEWDILEVPAVRNEKF 87
++W++ E P V+ +F
Sbjct: 25 LQWNMSEYPGVKTVRF 40
>UNIPROTKB|F1NJ26 [details] [associations]
symbol:CHRND "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0050881 "musculoskeletal movement" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GO:GO:0005892 GeneTree:ENSGT00620000087691
OMA:FIVNHMR IPI:IPI00592975 EMBL:AADN02020674
Ensembl:ENSGALT00000012824 Uniprot:F1NJ26
Length = 513
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 119/352 (33%), Positives = 188/352 (53%)
Query: 20 SFYPY--HTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRR-ERVGVDLSEFYMSVEWDI 76
+F+P+ L+ +E + K++ P + R E + +D F + EW+I
Sbjct: 153 NFFPFDWQNCTLKFSSLAYNAQEINMHLKEESDPETEKNYRVEWIIIDPEGFTENGEWEI 212
Query: 77 LEVPAVRN-EKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSD 135
+ PA +N Y + DITF + ++RK LFY +NI+ PC+ I+F+ +L FYLP+D
Sbjct: 213 IHRPARKNIHPSYPTESSEHQDITFYLIIKRKPLFYVINIVTPCVLIAFMAILVFYLPAD 272
Query: 136 SGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNV 195
SGEK+TL IS+L++ VF LLV + +P TS +PL+GKYL+F M+LV+ + + VVVLN
Sbjct: 273 SGEKMTLVISVLLAQSVFLLLVSQRLPATSHAIPLIGKYLLFIMLLVTAVVVICVVVLNF 332
Query: 196 HFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSH-LADGPLIGGSGGSCKIHGHV 254
HFR+P TH M+ WVK VF++ LPR+L M P +P G+ + G + + +
Sbjct: 333 HFRTPSTHVMSDWVKEVFLEILPRLLHMSHPAESPAGAPCIRRCSSAGYIAKADEYYSVK 392
Query: 255 SLSNILTEAILSS---SPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDST 311
S S ++ E + + P A S Q + + FI +H R ++
Sbjct: 393 SRSELMFEKQSERHGLASRVTPARFAPAATSEEQLYDHLKPTLDEANFIVKHMREKNSYN 452
Query: 312 KESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVPI 363
+E K++W VA LDRL L++ T ++ GT I L +Y+ P+
Sbjct: 453 EE------KDNWNRVARTLDRLCLFLITPMLVVGTLWIFLMG--IYNHPPPL 496
>ZFIN|ZDB-GENE-070821-4 [details] [associations]
symbol:chrnb1 "cholinergic receptor, nicotinic, beta
1 (muscle)" species:7955 "Danio rerio" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-070821-4 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0004889
GO:GO:0005892 EMBL:JN236210 UniGene:Dr.111371 Uniprot:G3KGY2
Length = 492
Score = 370 (135.3 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 74/159 (46%), Positives = 107/159 (67%)
Query: 68 FYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTV 127
F S EW I + +N + ++ Y DITF + + RK +FY VNI++PC+ I+ + +
Sbjct: 200 FSESGEWHIRHKVSRKNVR-----EDLYEDITFYLIIERKPMFYVVNIVLPCILITIIAI 254
Query: 128 LTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISIC 187
FYLP D+GEK+ LSI++L++L VF LL+ IP TSL VP++ YL+ MILV+ S+
Sbjct: 255 FNFYLPPDAGEKMGLSINVLLTLTVFLLLLANKIPETSLGVPIIVNYLMITMILVTFSVI 314
Query: 188 VTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++VVVLN+H RSP TH+M WV+++FI LP L M RP
Sbjct: 315 LSVVVLNLHHRSPNTHQMPLWVRKIFIHMLPPYLGMLRP 353
Score = 125 (49.1 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 287 PPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
PP + + + +IAE ++Q + E+ +KEDW+YVA+V DRLFLWIF + GT
Sbjct: 421 PPELKTAVEAITYIAE--QLQAEKDYEA----LKEDWQYVAMVADRLFLWIFVIFTTLGT 474
Query: 347 AGIILQA 353
GI A
Sbjct: 475 LGIFTDA 481
>UNIPROTKB|P02717 [details] [associations]
symbol:CHNRD "Acetylcholine receptor subunit delta"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 CTD:1144 KO:K04816 EMBL:K02903 EMBL:X52010
IPI:IPI00592975 PIR:A03176 RefSeq:NP_001026488.1 UniGene:Gga.32106
ProteinModelPortal:P02717 SMR:P02717 GeneID:424940 KEGG:gga:424940
eggNOG:NOG294470 InParanoid:P02717 OrthoDB:EOG4VMFF8
NextBio:20827200 Uniprot:P02717
Length = 513
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 119/352 (33%), Positives = 187/352 (53%)
Query: 20 SFYPY--HTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRR-ERVGVDLSEFYMSVEWDI 76
+F+P+ L+ +E + K++ P + R E + +D F + EW+I
Sbjct: 153 NFFPFDWQNCTLKFSSLAYNAQEINMHLKEESDPETEKNYRVEWIIIDPEGFTENGEWEI 212
Query: 77 LEVPAVRN-EKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSD 135
+ PA +N Y + DITF + ++RK LFY +NI+ PC+ I+F+ +L FYLP+D
Sbjct: 213 IHRPARKNIHPSYPTESSEHQDITFYLIIKRKPLFYVINIVTPCVLIAFMAILVFYLPAD 272
Query: 136 SGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNV 195
SGEK+TL IS+L++ VF LLV + +P TS +PL+GKYL+F M+LV+ + + VVVLN
Sbjct: 273 SGEKMTLVISVLLAQSVFLLLVSQRLPATSHAIPLIGKYLLFIMLLVTAVVVICVVVLNF 332
Query: 196 HFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGGSGGSCKIHGHV- 254
HFR+P TH M+ WV+ VF++ LPR+L M P +P G+ G + + V
Sbjct: 333 HFRTPSTHVMSDWVRGVFLEILPRLLHMSHPAESPAGAPCIRRCSSAGYIAKAEEYYSVK 392
Query: 255 SLSNILTEAILSS---SPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDST 311
S S ++ E + + P A S Q + + FI +H R ++
Sbjct: 393 SRSELMFEKQSERHGLASRVTPARFAPAATSEEQLYDHLKPTLDEANFIVKHMREKNSYN 452
Query: 312 KESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVPI 363
+E K++W VA LDRL L++ T ++ GT I L +Y+ P+
Sbjct: 453 EE------KDNWNRVARTLDRLCLFLITPMLVVGTLWIFLMG--IYNHPPPL 496
>UNIPROTKB|E1BT92 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 EMBL:AADN02020075 EMBL:AADN02020076
EMBL:AADN02020077 IPI:IPI00604113 Ensembl:ENSGALT00000015138
ArrayExpress:E1BT92 Uniprot:E1BT92
Length = 374
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 91/179 (50%), Positives = 125/179 (69%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW + + ++ +Y CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 185 DLSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMQRLPLYFIVNVIIPCLLF 244
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLT FYLP+DSGEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY++F M+ V
Sbjct: 245 SFLTGFVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFV 304
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL---VMRRPLYN-PDGSHLAD 237
SI +TV+V+N H RSP TH M PWV+++FI +P I+ M+RP + PD A+
Sbjct: 305 IASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMFFSTMKRPSRDKPDKKIFAE 363
>UNIPROTKB|Q494W8 [details] [associations]
symbol:CHRFAM7A "CHRNA7-FAM7A fusion protein" species:9606
"Homo sapiens" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 HOGENOM:HOG000006756
eggNOG:NOG235631 OrthoDB:EOG483D4K UniGene:Hs.510853 GeneID:89832
KEGG:hsa:89832 CTD:89832 PharmGKB:PA26483 EMBL:AK292984
EMBL:BC101346 EMBL:BC101347 EMBL:BC101348 EMBL:AC010799
EMBL:AC019322 EMBL:AF029838 RefSeq:NP_647536.1
ProteinModelPortal:Q494W8 SMR:Q494W8 STRING:Q494W8 DMDM:91208254
Ensembl:ENST00000299847 UCSC:uc001zdt.1 GeneCards:GC15M030653
H-InvDB:HIX0038397 HGNC:HGNC:15781 MIM:609756 neXtProt:NX_Q494W8
InParanoid:Q494W8 OMA:CDIADER PhylomeDB:Q494W8 BindingDB:Q494W8
GenomeRNAi:89832 NextBio:76307 ArrayExpress:Q494W8 Bgee:Q494W8
CleanEx:HS_CHRFAM7A Genevestigator:Q494W8
GermOnline:ENSG00000166664 Uniprot:Q494W8
Length = 412
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 118/322 (36%), Positives = 181/322 (56%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ +P R+E+FY CC EPY D+TF +TMRR+TL+Y +N++IPC+ IS
Sbjct: 96 DISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLIS 155
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 156 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 215
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP----------------- 226
+S+ VTV+VL H P KM W + + + + L M+RP
Sbjct: 216 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 275
Query: 227 LYNPDGSHLADGPLIGGS----G--GSCKIHGHVSLSNILTEAILSSSPQDDSKHL---- 276
L + + S +A P G+ G G +H + + + ++ SP D +HL
Sbjct: 276 LASVEMSAVAPPPASNGNLLYIGFRGLDGVHCVPTPDSGVVCGRMACSPTHD-EHLLHGG 334
Query: 277 RPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLW 336
+PP + P + + VR+IA R QD+S E+ V +WK+ A V+DRL L
Sbjct: 335 QPP-----EGDPDLAKILEEVRYIANRFRCQDES--EA----VCSEWKFAACVVDRLCLM 383
Query: 337 IFTLAVLGGTAGIILQAPSLYD 358
F++ + T GI++ AP+ +
Sbjct: 384 AFSVFTIICTIGILMSAPNFVE 405
>UNIPROTKB|E2RHB4 [details] [associations]
symbol:CHRNB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 OMA:TPTASMD EMBL:AAEX03008990
EMBL:AAEX03008991 Ensembl:ENSCAFT00000002676 NextBio:20856784
Uniprot:E2RHB4
Length = 508
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 90/166 (54%), Positives = 120/166 (72%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
+ +F S EWDI+ +P R D Y+D+T++ +RRK LFYT+N+IIPC+ I+
Sbjct: 192 MDDFTPSGEWDIVALPGRRTVNPQ---DPSYVDVTYDFILRRKPLFYTINLIIPCLLITS 248
Query: 125 LTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 184
L +L FYLPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+
Sbjct: 249 LAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTF 308
Query: 185 SICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNP 230
SI +V VLNVH RSP TH MAPWV+R F+ LP L M+RP +P
Sbjct: 309 SIVTSVCVLNVHHRSPSTHTMAPWVRRCFLHKLPTFLFMKRPDSSP 354
>UNIPROTKB|F1MDD1 [details] [associations]
symbol:CHRNA9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 GO:GO:0004889 GO:GO:0050910
GO:GO:0007204 GeneTree:ENSGT00630000089708 CTD:55584 KO:K04810
OMA:CAQYKVL EMBL:DAAA02017486 IPI:IPI00691377 RefSeq:NP_001179475.1
UniGene:Bt.106486 ProteinModelPortal:F1MDD1
Ensembl:ENSBTAT00000039651 GeneID:521876 KEGG:bta:521876
NextBio:20873389 Uniprot:F1MDD1
Length = 479
Score = 407 (148.3 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 74/158 (46%), Positives = 113/158 (71%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F VEW++ +PAV+N Y CC EPY D+TF + ++R++ FY VN++IPC+ IS
Sbjct: 193 DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVLIS 252
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L+FYLP+ SGEKV+L ++IL+++ VF L+V EI+P S VPL+GKY I M L++
Sbjct: 253 FLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIATMALIT 311
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL 221
S +T++V+N+HF + + PW + V ++++ RIL
Sbjct: 312 ASTALTIMVMNIHFCGAEARPVPPWARVVILKYMSRIL 349
Score = 77 (32.2 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 322 DWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+WK VA V+DR F+WIF + V T II +A
Sbjct: 447 EWKKVAKVIDRFFMWIFFIMVFVMTILIIARA 478
>WB|WBGene00002974 [details] [associations]
symbol:lev-1 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040012
"regulation of locomotion" evidence=IMP] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0015464 "acetylcholine receptor activity" evidence=IMP]
[GO:0022848 "acetylcholine-gated cation channel activity"
evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0043005
GO:GO:0040012 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 GO:GO:0015464 GO:GO:0046662
GO:GO:0022848 EMBL:X98601 EMBL:X98246 EMBL:Z81093 PIR:T22910
RefSeq:NP_001255705.1 UniGene:Cel.19676 ProteinModelPortal:Q27218
SMR:Q27218 MINT:MINT-3383590 STRING:Q27218 EnsemblMetazoa:F09E8.7a
GeneID:178269 KEGG:cel:CELE_F09E8.7 UCSC:F09E8.7 CTD:178269
WormBase:F09E8.7a eggNOG:NOG311736 InParanoid:Q27218 OMA:STCEDID
NextBio:900440 ArrayExpress:Q27218 Uniprot:Q27218
Length = 507
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 115/305 (37%), Positives = 174/305 (57%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD SE+ S WD+++ PAV D ++ F I +RRKTLFYTV +I+P + +
Sbjct: 201 VDFSEYSTSSIWDMMDGPAVLTS------DRSRIE--FQIRIRRKTLFYTVVLILPTVLM 252
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
+FL V FYLP+ SGEK+ L++++L+S+ VF LLV +I+PPTS +PL+ KYL+ +L
Sbjct: 253 AFLNVTVFYLPTASGEKMGLTMNVLLSIVVFLLLVSKILPPTSSSIPLVAKYLLLTFVLN 312
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNP--DGSH---LAD 237
I+I VT ++ N++FRSP TH++ PWV++VF+ LP ++ M+RP SH L
Sbjct: 313 IITIMVTTIICNIYFRSPITHRLPPWVRKVFLDILPLLMCMQRPHRKNVIQRSHRRLLET 372
Query: 238 GPLIGG----SGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRS 293
GP + SG + H + + S DD L P A R+
Sbjct: 373 GPSVEENPMRSGEHHPLCRHTHNQDSCRRVRIQSDELDDE--LSPEA----------QRA 420
Query: 294 CFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+ FI E+ R ++ TK+ ++DWK++A V+DR L+ F A +GGT GII A
Sbjct: 421 IDAIEFITENRR-DEEITKQ-----FRDDWKFIASVVDRFLLYGFFGATVGGTIGIIFTA 474
Query: 354 PSLYD 358
PS+++
Sbjct: 475 PSVFE 479
>WB|WBGene00000050 [details] [associations]
symbol:acr-11 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0045202 "synapse"
evidence=IC] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0045202
GO:GO:0004889 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
KO:K05312 GO:GO:0015464 EMBL:FO081014 PIR:T25671 RefSeq:NP_491906.1
UniGene:Cel.28710 ProteinModelPortal:P91197 SMR:P91197
EnsemblMetazoa:D2092.3 GeneID:191599 KEGG:cel:CELE_D2092.3
UCSC:D2092.3 CTD:191599 WormBase:D2092.3 eggNOG:NOG329197
InParanoid:P91197 OMA:QGESQRR NextBio:949624 Uniprot:P91197
Length = 461
Score = 403 (146.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 76/167 (45%), Positives = 115/167 (68%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
+DLS + ++ EW ++ A R +Y CC EPY + + + +RR+TL+Y N+IIP + I
Sbjct: 194 MDLSTYLVNGEWQVISTNAKRVVSYYKCCPEPYPTVNYYLHIRRRTLYYGFNLIIPSLLI 253
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFL-LVVEIIPPTSLVVPLLGKYLIFAMIL 181
S + +L F P D+GEK+TL ++IL+++ VFFL +V E+ PPTS VPL+G + M++
Sbjct: 254 SLMAILGFMFPPDAGEKITLEVTILLAI-VFFLSMVSEMTPPTSEAVPLIGVFFSCCMLV 312
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLY 228
VS S+ T+VVLN+HFRS +H+M P V+RV ++FLP +L M RP Y
Sbjct: 313 VSASVVFTIVVLNLHFRSADSHEMNPLVRRVLLEFLPWLLFMSRPGY 359
Score = 75 (31.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 319 VKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
++ DW++ A+V+DR L +FT+ ++ I++ AP +
Sbjct: 422 IQTDWRFAAMVVDRACLLLFTVFIVISILAIMMSAPHI 459
>UNIPROTKB|P54131 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9913 "Bos taurus" [GO:0006816 "calcium ion
transport" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=ISS] [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0000187 "activation of MAPK activity"
evidence=ISS] [GO:0001540 "beta-amyloid binding" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0015643 "toxic substance binding" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0050890 "cognition" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0042166
"acetylcholine binding" evidence=ISS] [GO:0035094 "response to
nicotine" evidence=ISS] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISS] [GO:0017081 "chloride
channel regulator activity" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISS] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0042803 GO:GO:0008284
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890
GO:GO:0001666 GO:GO:0000187 GO:GO:0045766 GO:GO:0001540
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG235631 GO:GO:0005892 GO:GO:0015464 GO:GO:0035094
GO:GO:0006816 EMBL:X93604 IPI:IPI00688255 IPI:IPI00692708
RefSeq:NP_776940.1 UniGene:Bt.88 ProteinModelPortal:P54131
SMR:P54131 STRING:P54131 GeneID:282178 KEGG:bta:282178 CTD:1139
InParanoid:P54131 KO:K04809 OrthoDB:EOG483D4K BindingDB:P54131
ChEMBL:CHEMBL5934 NextBio:20806007 GO:GO:0017081 GO:GO:0015643
GO:GO:0006874 GO:GO:0032720 Uniprot:P54131
Length = 499
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 119/318 (37%), Positives = 177/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ V R+EKFY CC EPY D+TF +++RR+TL+Y +N++IPC+ IS
Sbjct: 183 DISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLNLLIPCVLIS 242
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 243 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 302
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------ 234
+S+ VTV+VL H P KM W + V + + L M+RP P H
Sbjct: 303 LSVVVTVIVLQYHHHDPDGGKMPKWTRVVLLNWCAWFLRMKRPGEDKVRPACQHNERRCS 362
Query: 235 LAD-------GP-------LIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPA 280
LA GP L G G +H + + + ++ SP D +HL A
Sbjct: 363 LASVEMSAVAGPPATNGNLLYIGFRGLDTMHCAPTPDSGVVCGRVACSPTHD-EHLLH-A 420
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
++ P + + VR+IA R QD+S E+ V +WK+ A V+DRL L F++
Sbjct: 421 GQPSEGDPDLAKILEEVRYIAHRFRCQDES--EA----VCSEWKFAACVVDRLCLMAFSV 474
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 475 FTILCTIGILMSAPNFVE 492
>UNIPROTKB|F1MQB9 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9913 "Bos taurus" [GO:0009897 "external side of
plasma membrane" evidence=IEA] [GO:0008306 "associative learning"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0001988
"positive regulation of heart rate involved in baroreceptor
response to decreased systemic arterial blood pressure"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0060112
"generation of ovulation cycle rhythm" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042113 "B cell activation" evidence=IEA] [GO:0042110 "T cell
activation" evidence=IEA] [GO:0035095 "behavioral response to
nicotine" evidence=IEA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA] [GO:0032691
"negative regulation of interleukin-1 beta production"
evidence=IEA] [GO:0032225 "regulation of synaptic transmission,
dopaminergic" evidence=IEA] [GO:0032094 "response to food"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=IEA] [GO:0014061
"regulation of norepinephrine secretion" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PROSITE:PS00236
GO:GO:0016021 GO:GO:0009897 GO:GO:0016324 GO:GO:0007613
GO:GO:0035095 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050728
GO:GO:0006897 GO:GO:0014061 GO:GO:0007271 GO:GO:0042391
GO:GO:0004889 GeneTree:ENSGT00630000089708 GO:GO:0042113
IPI:IPI00688255 GO:GO:0032720 OMA:AGPPATN GO:GO:0008306
GO:GO:0048149 GO:GO:0060112 GO:GO:0032691 GO:GO:0032715
GO:GO:0001988 GO:GO:0032225 GO:GO:0032094 GO:GO:0030317
GO:GO:0042110 EMBL:DAAA02052400 Ensembl:ENSBTAT00000020942
Uniprot:F1MQB9
Length = 389
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 118/318 (37%), Positives = 177/318 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ V R+EKFY CC EPY D+TF +++RR+TL+Y +N++IPC+ IS
Sbjct: 73 DISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLNLLIPCVLIS 132
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V
Sbjct: 133 ALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVG 192
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------ 234
+S+ VTV+VL H P KM W + + + + L M+RP P H
Sbjct: 193 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 252
Query: 235 LAD-------GP-------LIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPA 280
LA GP L G G +H + + + ++ SP D +HL A
Sbjct: 253 LASVEMSAVAGPPATNGNLLYIGFRGLDTMHCAPTPDSGVVCGRVACSPTHD-EHLLH-A 310
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
++ P + + VR+IA R QD+S E+ V +WK+ A V+DRL L F++
Sbjct: 311 GQPSEGDPDLAKILEEVRYIAHRFRCQDES--EA----VCSEWKFAACVVDRLCLMAFSV 364
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 365 FTILCTIGILMSAPNFVE 382
>UNIPROTKB|Q9I8C7 [details] [associations]
symbol:CHRNA10 "Neuronal acetylcholine receptor subunit
alpha-10" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AJ295624 IPI:IPI00578800
RefSeq:NP_001094506.1 UniGene:Gga.47073 ProteinModelPortal:Q9I8C7
GeneID:430628 KEGG:gga:430628 CTD:57053 HOVERGEN:HBG003756
KO:K04811 NextBio:20830508 GO:GO:0004889 Uniprot:Q9I8C7
Length = 452
Score = 404 (147.3 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 71/158 (44%), Positives = 108/158 (68%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DL++F +VEW++L +PA RN Y CC EPY D+T+ + +RR+ FY N+++PC+ IS
Sbjct: 194 DLTDFVENVEWEVLGMPATRNVVTYGCCSEPYPDVTYTLLLRRRASFYIFNLLLPCVMIS 253
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L FYLP+DSGEKV+L +++L++L VF LLV E +PP+ V PL+GKY I M +++
Sbjct: 254 FLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPSESV-PLIGKYYIATMTMIT 312
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL 221
S +T+ ++N+H P + PW +R+ + L R L
Sbjct: 313 ASTALTIFIMNIHHCGPGARPVPPWARRLILHHLARAL 350
Score = 72 (30.4 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 322 DWKYVALVLDRLFLWIFTLAV 342
+WK VA V+DR F+W+F L V
Sbjct: 420 EWKKVAKVMDRFFMWVFFLMV 440
>UNIPROTKB|E1C4Q6 [details] [associations]
symbol:E1C4Q6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00630000089708 EMBL:AADN02055212
EMBL:AADN02055213 IPI:IPI00821979 Ensembl:ENSGALT00000036366
OMA:CCAVSET ArrayExpress:E1C4Q6 Uniprot:E1C4Q6
Length = 451
Score = 401 (146.2 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 71/158 (44%), Positives = 108/158 (68%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DL++F +VEW++L +PA RN Y CC EPY D+T+ + +RR+ FY N+++PC+ IS
Sbjct: 193 DLTDFVENVEWEVLGMPATRNVVTYGCCSEPYPDVTYILLLRRRASFYIFNLLLPCVMIS 252
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L FYLP+DSGEKV+L +++L++L VF LLV E +PP+ V PL+GKY I M +++
Sbjct: 253 FLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPSESV-PLIGKYYIATMTMIT 311
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL 221
S +T+ ++N+H P + PW +R+ + L R L
Sbjct: 312 ASTALTIFIMNIHHCGPGARPVPPWARRLILHHLARAL 349
Score = 72 (30.4 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 322 DWKYVALVLDRLFLWIFTLAV 342
+WK VA V+DR F+W+F L V
Sbjct: 419 EWKKVAKVMDRFFMWVFFLMV 439
>UNIPROTKB|F1NWW3 [details] [associations]
symbol:F1NWW3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 IPI:IPI00578800 GeneTree:ENSGT00630000089708
EMBL:AADN02055212 EMBL:AADN02055213 Ensembl:ENSGALT00000022103
ArrayExpress:F1NWW3 Uniprot:F1NWW3
Length = 329
Score = 401 (146.2 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 71/158 (44%), Positives = 108/158 (68%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DL++F +VEW++L +PA RN Y CC EPY D+T+ + +RR+ FY N+++PC+ IS
Sbjct: 71 DLTDFVENVEWEVLGMPATRNVVTYGCCSEPYPDVTYILLLRRRASFYIFNLLLPCVMIS 130
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L FYLP+DSGEKV+L +++L++L VF LLV E +PP+ V PL+GKY I M +++
Sbjct: 131 FLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPSESV-PLIGKYYIATMTMIT 189
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL 221
S +T+ ++N+H P + PW +R+ + L R L
Sbjct: 190 ASTALTIFIMNIHHCGPGARPVPPWARRLILHHLARAL 227
Score = 72 (30.4 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 322 DWKYVALVLDRLFLWIFTLAV 342
+WK VA V+DR F+W+F L V
Sbjct: 297 EWKKVAKVMDRFFMWVFFLMV 317
>UNIPROTKB|B4DT92 [details] [associations]
symbol:CHRND "cDNA FLJ53914, highly similar to
Acetylcholine receptor protein subunit delta" species:9606 "Homo
sapiens" [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 HOVERGEN:HBG003756 GO:GO:0004889 CTD:1144 KO:K04816
EMBL:AC092165 RefSeq:NP_000742.1 RefSeq:NP_001243586.1
UniGene:Hs.156289 GeneID:1144 KEGG:hsa:1144 HGNC:HGNC:1965
GenomeRNAi:1144 EMBL:AK300109 IPI:IPI00915865 SMR:B4DT92
STRING:B4DT92 Ensembl:ENST00000543200 UCSC:uc010zmg.2
Uniprot:B4DT92
Length = 502
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 123/359 (34%), Positives = 194/359 (54%)
Query: 20 SFYPY--HTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRRERVGVDLSEFYMSVEWDIL 77
+++P+ + L +E + K D R + E + +D F + EW+I+
Sbjct: 141 TYFPFDWQNCSLKFSSLKYTAKEITLSLKQDAKENRT-YPVEWIIIDPEGFTENGEWEIV 199
Query: 78 EVPAVRNEKFYTCCDEPYL-DITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDS 136
PA N D P DITF + +RRK LFY +NI++PC+ ISF+ L FYLP+DS
Sbjct: 200 HRPARVNVDPRAPLDSPSRQDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADS 259
Query: 137 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVH 196
GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F M+LV++ + + V+VLN+H
Sbjct: 260 GEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIH 319
Query: 197 FRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGGS---GGSCKIHGH 253
FR+P TH ++ VK++F++ LP +L M RP DG + G L+ S G K +
Sbjct: 320 FRTPSTHVLSEGVKKLFLETLPELLHMSRPA--EDGP--SPGALVRRSSSLGYISKAEEY 375
Query: 254 VSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCPPVMHRSCFCV---RFIAEH 303
L S+++ E S ++ L RPPA S + + V FI H
Sbjct: 376 FLLKSRSDLMFEK--QSERHGLARRLTTARRPPASSEQAQQELFNELKPAVDGANFIVNH 433
Query: 304 TRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVP 362
R Q++ +E K+ W VA +DRL L++ T ++ GTA I LQ +Y+ P
Sbjct: 434 MRDQNNYNEE------KDSWNRVARTVDRLCLFVVTPVMVVGTAWIFLQG--VYNQPPP 484
>UNIPROTKB|Q07001 [details] [associations]
symbol:CHRND "Acetylcholine receptor subunit delta"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0042166 "acetylcholine binding"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0006810 "transport" evidence=TAS] [GO:0006936
"muscle contraction" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0045211 "postsynaptic membrane" evidence=NAS] [GO:0048630
"skeletal muscle tissue growth" evidence=IMP] [GO:0050881
"musculoskeletal movement" evidence=IMP] [GO:0050905 "neuromuscular
process" evidence=NAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007165 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0050905 GO:GO:0048630 MIM:253290 MIM:601462 MIM:608930
Orphanet:33108 Orphanet:98913 HOGENOM:HOG000006757 GO:GO:0006936
CTD:1144 KO:K04816 OMA:FIVNHMR GO:GO:0050881 eggNOG:NOG294470
EMBL:X55019 EMBL:AC092165 EMBL:BC093923 EMBL:BC093925
IPI:IPI00014192 PIR:A60916 RefSeq:NP_000742.1 RefSeq:NP_001243586.1
UniGene:Hs.156289 ProteinModelPortal:Q07001 SMR:Q07001
STRING:Q07001 PhosphoSite:Q07001 DMDM:543759 PaxDb:Q07001
PRIDE:Q07001 Ensembl:ENST00000258385 GeneID:1144 KEGG:hsa:1144
UCSC:uc002vsw.3 GeneCards:GC02P233390 HGNC:HGNC:1965 MIM:100720
neXtProt:NX_Q07001 PharmGKB:PA26497 InParanoid:Q07001
PhylomeDB:Q07001 BindingDB:Q07001 ChEMBL:CHEMBL3011 GenomeRNAi:1144
NextBio:4760 ArrayExpress:Q07001 Bgee:Q07001 CleanEx:HS_CHRND
Genevestigator:Q07001 GermOnline:ENSG00000135902 Uniprot:Q07001
Length = 517
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 123/359 (34%), Positives = 194/359 (54%)
Query: 20 SFYPY--HTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRRERVGVDLSEFYMSVEWDIL 77
+++P+ + L +E + K D R + E + +D F + EW+I+
Sbjct: 156 TYFPFDWQNCSLKFSSLKYTAKEITLSLKQDAKENRT-YPVEWIIIDPEGFTENGEWEIV 214
Query: 78 EVPAVRNEKFYTCCDEPYL-DITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDS 136
PA N D P DITF + +RRK LFY +NI++PC+ ISF+ L FYLP+DS
Sbjct: 215 HRPARVNVDPRAPLDSPSRQDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADS 274
Query: 137 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVH 196
GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F M+LV++ + + V+VLN+H
Sbjct: 275 GEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIH 334
Query: 197 FRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGGS---GGSCKIHGH 253
FR+P TH ++ VK++F++ LP +L M RP DG + G L+ S G K +
Sbjct: 335 FRTPSTHVLSEGVKKLFLETLPELLHMSRPA--EDGP--SPGALVRRSSSLGYISKAEEY 390
Query: 254 VSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCPPVMHRSCFCV---RFIAEH 303
L S+++ E S ++ L RPPA S + + V FI H
Sbjct: 391 FLLKSRSDLMFEK--QSERHGLARRLTTARRPPASSEQAQQELFNELKPAVDGANFIVNH 448
Query: 304 TRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVP 362
R Q++ +E K+ W VA +DRL L++ T ++ GTA I LQ +Y+ P
Sbjct: 449 MRDQNNYNEE------KDSWNRVARTVDRLCLFVVTPVMVVGTAWIFLQG--VYNQPPP 499
>UNIPROTKB|Q03481 [details] [associations]
symbol:LOC396120 "Alpha8 subunit of nicotinic acetylcholine
receptor" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 eggNOG:NOG235631
OrthoDB:EOG483D4K OMA:QGESQRR HSSP:P22770 EMBL:AADN02065926
EMBL:AADN02065927 EMBL:AADN02065928 EMBL:AADN02065929
EMBL:AADN02065930 EMBL:AADN02065931 EMBL:AADN02065932
EMBL:AADN02065933 EMBL:AADN02065934 EMBL:AADN02065935 EMBL:X52296
IPI:IPI00572070 PIR:JH0173 RefSeq:NP_990532.1 UniGene:Gga.664
Ensembl:ENSGALT00000024751 GeneID:396120 KEGG:gga:396120
InParanoid:Q03481 ChEMBL:CHEMBL1628466 NextBio:20816178
Uniprot:Q03481
Length = 511
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 113/312 (36%), Positives = 172/312 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ VP RNE +Y CC EPY D+T+ ITMRR+TL+Y +N++IPC+ IS
Sbjct: 194 DISNYISNGEWDLVGVPGKRNELYYECCKEPYPDVTYTITMRRRTLYYGLNLLIPCVLIS 253
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y M++V
Sbjct: 254 GLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASIMVIVG 313
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN--PDG---SHLADG 238
+S+ VTV+VL H PQ KM WV+ + + + L M++P N P S+
Sbjct: 314 LSVVVTVLVLQFHHHDPQAGKMPRWVRVILLNWCAWFLRMKKPGENIKPLSCKYSYPKHH 373
Query: 239 PLIGGSGGSCKIHGHV-SLSNILTEAILSSSP----QDD--SKH--LRPPAFS---HAQC 286
P + + + + GH S N++ +P +D SK + P H Q
Sbjct: 374 PSLKNTEMNV-LPGHQPSNGNMIYSYHTMENPCCPQNNDLGSKSGKITCPLSEDNEHVQK 432
Query: 287 PPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
+M V+ + E + K+ + +WK+ A V+DRL L FTL + T
Sbjct: 433 KALMDTIPVIVKILEEVQFIAMRFRKQDEGEEICSEWKFAAAVIDRLCLVAFTLFAIICT 492
Query: 347 AGIILQAPSLYD 358
I++ AP+ +
Sbjct: 493 FTILMSAPNFIE 504
>WB|WBGene00000043 [details] [associations]
symbol:acr-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA;IDA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0015464 "acetylcholine receptor activity" evidence=IDA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 KO:K05312
eggNOG:NOG267576 GO:GO:0015464 TCDB:1.A.9.1.2 EMBL:FO081325
EMBL:Y08637 RefSeq:NP_509129.1 UniGene:Cel.19671
ProteinModelPortal:Q93149 SMR:Q93149 EnsemblMetazoa:K11G12.7
GeneID:180937 KEGG:cel:CELE_K11G12.7 UCSC:K11G12.7 CTD:180937
WormBase:K11G12.7 InParanoid:Q93149 OMA:PREFDGI NextBio:911642
Uniprot:Q93149
Length = 487
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 99/261 (37%), Positives = 158/261 (60%)
Query: 98 ITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLV 157
I++ I +RRK LFYTV +I+P + ++FL+++ FYLP++S EK+TL+ISIL++L VF L+V
Sbjct: 217 ISYQIKIRRKALFYTVILIMPTVLMAFLSMMVFYLPAESSEKITLAISILLALVVFLLVV 276
Query: 158 VEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFL 217
+I+PPTS +PL+ KYL+ I+ I+I V+V+++NV+FR P TH M WVK VF++FL
Sbjct: 277 SKILPPTSSTIPLMAKYLLMTFIMNMITIMVSVIIINVYFRGPATHIMPNWVKTVFLKFL 336
Query: 218 PRILVMRRPLYNPDGSHLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLR 277
P + VMRRP LA S K +A +S P+ S+ +
Sbjct: 337 PVLFVMRRP--ESTEKELAKMKREKRERRSMKSALKTFFKR--NDAKISEQPKQTSR--K 390
Query: 278 PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
+ S + ++ + +I H D++ K +E+WK+V++V+DRL L++
Sbjct: 391 DGSSSEEKLSSDAKKAIEAIEYITTHLT-HDNAFKRQ-----REEWKFVSVVIDRLLLYL 444
Query: 338 FTLAVLGGTAGIILQAPSLYD 358
F GGT GI+L AP++++
Sbjct: 445 FFAVTTGGTVGILLSAPNVFE 465
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 76/164 (46%), Positives = 117/164 (71%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
V+L+++ S WD+++ P + DE I++ I +RRK LFYTV +I+P + +
Sbjct: 190 VELNDYLPSGVWDLIDAPGL-------LIDERS-KISYQIKIRRKALFYTVILIMPTVLM 241
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
+FL+++ FYLP++S EK+TL+ISIL++L VF L+V +I+PPTS +PL+ KYL+ I+
Sbjct: 242 AFLSMMVFYLPAESSEKITLAISILLALVVFLLVVSKILPPTSSTIPLMAKYLLMTFIMN 301
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
I+I V+V+++NV+FR P TH M WVK VF++FLP + VMRRP
Sbjct: 302 MITIMVSVIIINVYFRGPATHIMPNWVKTVFLKFLPVLFVMRRP 345
>UNIPROTKB|F6XTV7 [details] [associations]
symbol:CHRNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 OMA:FIDGPNR EMBL:AAEX03003615
Ensembl:ENSCAFT00000025890 Uniprot:F6XTV7
Length = 587
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 118/316 (37%), Positives = 173/316 (54%)
Query: 55 PHRRERVGVDLSE--FYMSVEWDILEVPA--VRNEKFYTCCDEPYL-DITFNITMRRKTL 109
P R+E V + E F + +W+I+ P+ V+ E ++TF + +RRK L
Sbjct: 270 PDRQELQEVHIHEGTFIENGQWEIIHKPSRLVQPPVDPRRGGEGQRQEVTFYLIIRRKPL 329
Query: 110 FYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVP 169
FY VN+I PC+ I+ L + FYLP D+GEK+ LSI L++L VF LL+ + +P TSL VP
Sbjct: 330 FYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLSVP 389
Query: 170 LLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP--- 226
++ KYL+F MILV+ S+ ++VVVLN+H RSP TH+M WV+++FI LP L ++RP
Sbjct: 390 IIIKYLMFTMILVTFSVILSVVVLNLHHRSPHTHQMPTWVRQIFIHKLPLYLGLKRPKPE 449
Query: 227 ---LYNPDGSHLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLR-----P 278
+ P L D P G G+ + L++ L P+ + LR P
Sbjct: 450 RDLMPEPPPVALRDSPGSGWGRGTDEYFIRKPLNDFLFPKPNRFQPELSAPDLRRLVDGP 509
Query: 279 -PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI 337
PA PP + + +IA + Q+D +KEDW++VA+V+DRLFLW
Sbjct: 510 NPAVG---LPPELREVVSSISYIARQLQEQEDHHA------LKEDWQFVAMVVDRLFLWT 560
Query: 338 FTLAVLGGTAGIILQA 353
F + GT I L A
Sbjct: 561 FIIFTSVGTLVIFLDA 576
>WB|WBGene00000048 [details] [associations]
symbol:acr-9 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312 EMBL:Z70266
PIR:T19862 RefSeq:NP_510285.2 ProteinModelPortal:Q18556 SMR:Q18556
EnsemblMetazoa:C40C9.2 GeneID:191597 KEGG:cel:CELE_C40C9.2
UCSC:C40C9.2 CTD:191597 WormBase:C40C9.2 InParanoid:Q18556
OMA:RIPGNAN NextBio:949616 Uniprot:Q18556
Length = 534
Score = 375 (137.1 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 70/165 (42%), Positives = 114/165 (69%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 121
G+D+ + + EW++L VPA + ++PY + F + ++R+TL+Y +N+IIP
Sbjct: 198 GIDVQYYVQNGEWNLLAVPARHETNIFD--EQPYPSLFFYLIIQRRTLYYGLNLIIPSFL 255
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMIL 181
IS +TVL F LP D+GEK+TL I+IL+S+ F +V ++ PPTS VPL+G + M++
Sbjct: 256 ISLMTVLGFTLPPDAGEKITLEITILLSVCFFLSMVADMTPPTSEAVPLIGAFFSCCMLV 315
Query: 182 VSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
VS S+ TV+VLN+H R P+TH+M+P+++ + + +LP +L+MRRP
Sbjct: 316 VSASVVFTVLVLNLHNRKPETHEMSPFLRELLLIWLPWLLLMRRP 360
Score = 93 (37.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 290 MHRSCFCVRFIAEHTR-MQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAG 348
M ++C ++ I+ TR M+ ++ DWK+ A+V+DR L F++ ++ T G
Sbjct: 465 MQKACLELKNISSQTRAMRKKMEEDERDEQAANDWKFAAMVVDRCCLITFSVFIVVSTCG 524
Query: 349 IILQAPSL 356
I+ +P L
Sbjct: 525 IMFSSPHL 532
>ZFIN|ZDB-GENE-060503-725 [details] [associations]
symbol:chrna10 "cholinergic receptor, nicotinic,
alpha 10" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-060503-725 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 CTD:57053 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
EMBL:BX072550 IPI:IPI00499462 RefSeq:NP_001038269.1
UniGene:Dr.74089 Ensembl:ENSDART00000012872 GeneID:556507
KEGG:dre:556507 InParanoid:Q1LY90 OMA:NAMESAD OrthoDB:EOG4J1189
NextBio:20881521 Uniprot:Q1LY90
Length = 527
Score = 395 (144.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 70/157 (44%), Positives = 108/157 (68%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DL++ +VEW++L +PA RN Y CC +PY D+T+ + ++R+ FY N++IPC+ IS
Sbjct: 187 DLADLVDNVEWEVLGMPAKRNIILYGCCADPYPDVTYTLKLKRRASFYVFNLLIPCVMIS 246
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L FYLP+DSGEKV+L ++++++L VF LLV EI+PP+ V PL+GKY I M +++
Sbjct: 247 FLAPLGFYLPADSGEKVSLGVTVMLALTVFQLLVAEIMPPSENV-PLIGKYYIATMTMIT 305
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRI 220
S +T+ V+N+H P + W K+ +Q+L RI
Sbjct: 306 ASTALTIFVMNIHHCGPDAKPVPDWAKKFILQYLARI 342
Score = 71 (30.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 322 DWKYVALVLDRLFLWIFTLAV 342
+WK VA VLDR F+W+F + V
Sbjct: 495 EWKKVAKVLDRFFMWLFFIMV 515
>UNIPROTKB|F1Q1V1 [details] [associations]
symbol:CHRND "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 CTD:1144 KO:K04816 OMA:FIVNHMR
EMBL:AAEX03014447 RefSeq:XP_543288.2 Ensembl:ENSCAFT00000017944
GeneID:486162 KEGG:cfa:486162 Uniprot:F1Q1V1
Length = 517
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 111/306 (36%), Positives = 171/306 (55%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ PA N D P + D+TF + +RRK LFY +NI++
Sbjct: 196 EWIIIDPEGFTENGEWEIVHRPARINVDPSIPLDSPGHQDVTFYLIIRRKPLFYVINILV 255
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP+DSGEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 256 PCVLISFMINLVFYLPADSGEKTSMAISVLLAQSVFLLLISKRLPATSMAIPLIGKFLLF 315
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK++F++ LP +L M RP DG +
Sbjct: 316 GMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKLFLETLPELLHMSRPA--EDGP--SP 371
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHL--------RPPAFSHAQCPPV 289
G L+ S I + + + L Q + L RPPA S +
Sbjct: 372 GALVRRSSSLGYISKAEEYFLLKSRSDLMFEKQSERHGLARRPTTARRPPAGSEQAQQEL 431
Query: 290 MHRSCFCV---RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
V FI H + Q+D +E K+ W VA +DRL L++ T ++ GT
Sbjct: 432 FSELKPAVDGANFIVNHMKDQNDYNEE------KDCWNRVARTVDRLCLFVVTPIMVVGT 485
Query: 347 AGIILQ 352
A I LQ
Sbjct: 486 AWIFLQ 491
>UNIPROTKB|P04758 [details] [associations]
symbol:CHRNB1 "Acetylcholine receptor subunit beta"
species:9913 "Bos taurus" [GO:0001941 "postsynaptic membrane
organization" evidence=ISS] [GO:0006812 "cation transport"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007271
"synaptic transmission, cholinergic" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0035095
"behavioral response to nicotine" evidence=ISS] [GO:0048747 "muscle
fiber development" evidence=ISS] [GO:0050877 "neurological system
process" evidence=ISS] [GO:0015267 "channel activity" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0042166 "acetylcholine binding"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007165 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274
GO:GO:0045202 GO:GO:0007271 GO:GO:0042391 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
HOGENOM:HOG000006757 GeneTree:ENSGT00620000087691 EMBL:X00962
EMBL:BC147876 IPI:IPI00691448 PIR:S07227 RefSeq:NP_776941.1
UniGene:Bt.5107 ProteinModelPortal:P04758 SMR:P04758 STRING:P04758
Ensembl:ENSBTAT00000025624 GeneID:282179 KEGG:bta:282179 CTD:1140
eggNOG:NOG243276 InParanoid:P04758 KO:K04812 OMA:FIDGPNR
OrthoDB:EOG4DFPNC NextBio:20806008 GO:GO:0015267 GO:GO:0006936
GO:GO:0048747 GO:GO:0001941 Uniprot:P04758
Length = 505
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 119/349 (34%), Positives = 188/349 (53%)
Query: 20 SFYPYHTAARSTEDLSRFKRESSRKN-KDDLSPRRPPHRRERVGVDLSEFYMSVEWDILE 78
+++P+ T S + +SS + + LSP R+ V + F + +W+I+
Sbjct: 157 TYFPFDWQ-NCTMVFSSYSYDSSEVSLQTGLSPEG--QERQEVYIHEGTFIENGQWEIIH 213
Query: 79 VPA--VRNEKFYTCCDEPYLD-ITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSD 135
P+ ++ E + +TF + +RRK LFY VN+I PC+ I+ L + FYLP D
Sbjct: 214 KPSRLIQPSVDPRGGGEGRREEVTFYLIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPD 273
Query: 136 SGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNV 195
+GEK+ LSI L++L VF LL+ + +P TSL VP++ KYL+F M+LV+ S+ ++VVVLN+
Sbjct: 274 AGEKMGLSIFALLTLTVFLLLLADKVPETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNL 333
Query: 196 HFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIG-----GSG---GS 247
H RSP TH+M WV+++FI LP L ++RP P+ + + P I GSG G+
Sbjct: 334 HHRSPHTHQMPLWVRQIFIHKLPLYLGLKRP--KPERDQMQEPPSIAPRDSPGSGWGRGT 391
Query: 248 CKIHGHVSLSNILTEAILSSSPQDDSKHLRP--PAFSHAQ-CPPVMHRSCFCVRFIAEHT 304
+ ++ L P+ + LR + A PP + + +IA
Sbjct: 392 DEYFIRKPPNDFLFPKPNRFQPELSAPDLRRFIDGPNRAVGLPPELREVVSSISYIARQL 451
Query: 305 RMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+ Q+D ++KEDW++VA+V+DRLFLW F + GT I L A
Sbjct: 452 QEQEDHD------VLKEDWQFVAMVVDRLFLWTFIIFTSVGTLVIFLDA 494
>RGD|621534 [details] [associations]
symbol:Chrna9 "cholinergic receptor, nicotinic, alpha 9
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IDA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=IEP] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:621534
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 GO:GO:0050910 GO:GO:0007204
GeneTree:ENSGT00630000089708 GO:GO:0005892 CTD:55584 KO:K04810
OrthoDB:EOG470TH4 OMA:CAQYKVL EMBL:U12336 EMBL:AY574257
IPI:IPI00197478 PIR:A55382 RefSeq:NP_075219.1 UniGene:Rn.54463
ProteinModelPortal:P43144 STRING:P43144 PhosphoSite:P43144
DNASU:65024 Ensembl:ENSRNOT00000003382 GeneID:65024 KEGG:rno:65024
UCSC:RGD:621534 InParanoid:P43144 BindingDB:P43144
ChEMBL:CHEMBL2585 NextBio:613788 Genevestigator:P43144
GermOnline:ENSRNOG00000002484 GO:GO:0007605 Uniprot:P43144
Length = 479
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 105/294 (35%), Positives = 165/294 (56%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F VEW++ +PAV+N Y CC EPY D+TF + ++R++ FY VN++IPC+ IS
Sbjct: 193 DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVLIS 252
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L+FYLP+ SGEKV+L ++IL+++ VF L+V EI+P S VPL+GKY I M L++
Sbjct: 253 FLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIATMALIT 311
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGG 243
S +T++V+N+HF + + W K V ++++ RIL + Y+ S L+ P
Sbjct: 312 ASTALTIMVMNIHFCGAEARPVPHWAKVVILKYMSRILFV----YDVGESCLS--PRHSQ 365
Query: 244 SGGSC-KIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRF--I 300
K++ + SN+ T S + + + L + P + +C R+ +
Sbjct: 366 EPEQVTKVYSKLPESNLKTSRNKDLSRKKEVRKLLKNDLGYQGGIP-QNTDSYCARYEAL 424
Query: 301 AEHTRMQDDSTKESTLIMVK-EDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
++ K+ K +WK VA V+DR F+WIF V T II +A
Sbjct: 425 TKNIEYIAKCLKDHKATNSKGSEWKKVAKVIDRFFMWIFFAMVFVMTVLIIARA 478
>UNIPROTKB|F1SNR6 [details] [associations]
symbol:CHRNA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060112 "generation of ovulation cycle rhythm"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0048149 "behavioral response to
ethanol" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0042113 "B cell activation"
evidence=IEA] [GO:0042110 "T cell activation" evidence=IEA]
[GO:0035095 "behavioral response to nicotine" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IEA] [GO:0032691 "negative
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0032094 "response to food" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0016324 "apical
plasma membrane" evidence=IEA] [GO:0014061 "regulation of
norepinephrine secretion" evidence=IEA] [GO:0009897 "external side
of plasma membrane" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0001988 "positive regulation of heart rate
involved in baroreceptor response to decreased systemic arterial
blood pressure" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PROSITE:PS00236
GO:GO:0016021 GO:GO:0009897 GO:GO:0016324 GO:GO:0007613
GO:GO:0035095 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050728
GO:GO:0006897 GO:GO:0014061 GO:GO:0007271 GO:GO:0042391
GO:GO:0004889 GeneTree:ENSGT00630000089708 GO:GO:0042113
GO:GO:0032720 OMA:AGPPATN GO:GO:0008306 GO:GO:0048149 GO:GO:0060112
GO:GO:0032691 GO:GO:0032715 GO:GO:0001988 GO:GO:0032225
GO:GO:0032094 GO:GO:0030317 GO:GO:0042110 EMBL:CU694767
Ensembl:ENSSSCT00000005341 Uniprot:F1SNR6
Length = 390
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 114/303 (37%), Positives = 166/303 (54%)
Query: 79 VPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGE 138
+P RNEKFY CC EPY D+TF +T+RR+TL+Y +N++IPC+ IS L +L F LP+DSGE
Sbjct: 89 IPGKRNEKFYECCKEPYPDVTFTVTIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGE 148
Query: 139 KVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFR 198
K++L I++L+SL VF LLV EI+P TS VPL+ +Y MI+V +S+ VTV+VL H
Sbjct: 149 KISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHH 208
Query: 199 SPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------LAD-------GP--- 239
P KM W + + + + L M+RP P H LA GP
Sbjct: 209 DPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAGPPAT 268
Query: 240 ----LIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF 295
L G G +H + + + L+ SP D +HL ++ P + +
Sbjct: 269 NGNLLYIGFRGLDGVHCAPTPDSGVVCGRLACSPTHD-EHLLHGG-QPSEGDPDLAKILE 326
Query: 296 CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPS 355
VR+IA R QD+ E+ V +WK+ A V+DRL L F++ + T GI++ AP+
Sbjct: 327 EVRYIANRFRCQDEG--EA----VCSEWKFAACVVDRLCLMAFSVFTILCTIGILMSAPN 380
Query: 356 LYD 358
+
Sbjct: 381 FVE 383
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 79/166 (47%), Positives = 113/166 (68%)
Query: 64 DLSEFYMSVEWDILE---VPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 120
D+S + + EWD++ +P RNEKFY CC EPY D+TF +T+RR+TL+Y +N++IPC+
Sbjct: 71 DISGYIPNGEWDLVGNEGIPGKRNEKFYECCKEPYPDVTFTVTIRRRTLYYGLNLLIPCV 130
Query: 121 GISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMI 180
IS L +L F LP+DSGEK++L I++L+SL VF LLV EI+P TS VPL+ +Y MI
Sbjct: 131 LISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMI 190
Query: 181 LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+V +S+ VTV+VL H P KM W + + + + L M+RP
Sbjct: 191 IVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRP 236
>UNIPROTKB|F1NA49 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AADN02066018 IPI:IPI00680243
Ensembl:ENSGALT00000032795 Uniprot:F1NA49
Length = 324
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 86/163 (52%), Positives = 120/163 (73%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
VD +F+ + EW+IL ++ + P+ +T++ +RR LFYT+ +IIPC+G+
Sbjct: 164 VDRKDFFDNGEWEILNAKGMKGNRKDGLYSYPF--VTYSFVLRRLPLFYTLFLIIPCLGL 221
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
SFLTVL FYLPSD GEK++LS S+L+SL VF L++ EIIP +S V+PL+G+YL+F MI V
Sbjct: 222 SFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFV 281
Query: 183 SISICVTVVVLNVHFRSPQT-HKMAPWVKRVFIQFLPRILVMR 224
++SI VTV V+NVH RS T H MAPWVKR+F+Q LPR+L M+
Sbjct: 282 TLSIIVTVFVINVHHRSSATYHPMAPWVKRLFLQKLPRLLCMK 324
>UNIPROTKB|P04759 [details] [associations]
symbol:CHRND "Acetylcholine receptor subunit delta"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050881 "musculoskeletal movement" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0048630
HOGENOM:HOG000006757 GeneTree:ENSGT00620000087691 EMBL:X02473
IPI:IPI00704742 PIR:A24613 RefSeq:NP_776696.1 UniGene:Bt.89
ProteinModelPortal:P04759 SMR:P04759 STRING:P04759 PRIDE:P04759
Ensembl:ENSBTAT00000015135 GeneID:281687 KEGG:bta:281687 CTD:1144
eggNOG:NOG291810 KO:K04816 OMA:FIVNHMR NextBio:20805614
ArrayExpress:P04759 GO:GO:0050881 Uniprot:P04759
Length = 516
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 115/308 (37%), Positives = 175/308 (56%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYL-DITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ PA N D P D+TF + +RRK LFY +NI++
Sbjct: 195 EWIIIDPEGFTENGEWEIVHRPARVNVDPSVPLDSPNRQDVTFYLIIRRKPLFYVINILV 254
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP+D GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 255 PCVLISFMINLVFYLPADCGEKTSMAISVLLAQSVFLLLISKRLPATSMAIPLIGKFLLF 314
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK++F++ LP IL M RP DG +
Sbjct: 315 GMVLVTMVVVICVIVLNIHFRTPSTHVLSEPVKKLFLETLPEILHMSRPA--EDGP--SP 370
Query: 238 GPLIGGS---GGSCKIHGHVSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCP 287
G LI S G K + SL S+++ E S ++ L RPPA S
Sbjct: 371 GTLIRRSSSLGYISKAEEYFSLKSRSDLMFEK--QSERHGLARRLTTARRPPAGSEQAQQ 428
Query: 288 PVMHRSCFCV---RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLG 344
+ V FI H + Q++ +E K+ W VA +DRL L++ T ++
Sbjct: 429 ELFSELKPAVDGANFIVNHMKDQNNYNEE------KDCWNRVARTVDRLCLFVVTPIMVV 482
Query: 345 GTAGIILQ 352
GTA I LQ
Sbjct: 483 GTAWIFLQ 490
>UNIPROTKB|E2QUF7 [details] [associations]
symbol:CHRNA9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0007204 "elevation of
cytosolic calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 GO:GO:0004889 GO:GO:0050910
GO:GO:0007204 GeneTree:ENSGT00630000089708 CTD:55584 KO:K04810
OMA:CAQYKVL EMBL:AAEX03002531 RefSeq:XP_545950.3
ProteinModelPortal:E2QUF7 Ensembl:ENSCAFT00000025220 GeneID:488832
KEGG:cfa:488832 NextBio:20862120 Uniprot:E2QUF7
Length = 479
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 101/292 (34%), Positives = 164/292 (56%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F VEW++ +PAV+N Y CC EPY D+TF + ++R++ FY VN++IPC+ IS
Sbjct: 193 DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVLIS 252
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L+FYLP+ SGEKV+L ++IL+++ VF L+V EI+P S VPL+GKY I M L++
Sbjct: 253 FLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIATMALIT 311
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGG 243
S +T++V+N+HF + + W + V ++++ R+L + Y+ S L+
Sbjct: 312 ASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRVLCV----YDVGESCLS-AHHDRE 366
Query: 244 SGGSCKIHGHVSLSNILTEAILSSSPQDD-SKHLRPPAFSHAQCPPVMHRSCFCVRFIAE 302
K++G + N+ T+ + + +K L+ H + P C + +
Sbjct: 367 RTHLTKVYGKLPEPNLKTDRNKDLPRKKEINKLLKNDLGCHGENPQDADSYCAQYKVLTR 426
Query: 303 HTRMQDDSTKESTLIMVK-EDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+ K+ K +WK VA V+DR F+W+F + V T II +A
Sbjct: 427 NIEYIAKCLKDHKATNSKGSEWKKVAKVIDRFFMWVFFIMVFVMTVLIIARA 478
>UNIPROTKB|Q9UGM1 [details] [associations]
symbol:CHRNA9 "Neuronal acetylcholine receptor subunit
alpha-9" species:9606 "Homo sapiens" [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007204 "elevation of
cytosolic calcium ion concentration" evidence=IGI] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 DrugBank:DB00184
GO:GO:0050910 GO:GO:0007204 GO:GO:0005892 CTD:55584 KO:K04810
OrthoDB:EOG470TH4 EMBL:AJ243342 EMBL:AY123244 EMBL:AC118275
EMBL:BC113549 EMBL:BC113575 EMBL:AF227732 IPI:IPI00005432
RefSeq:NP_060051.2 UniGene:Hs.272278 ProteinModelPortal:Q9UGM1
SMR:Q9UGM1 STRING:Q9UGM1 PhosphoSite:Q9UGM1 DMDM:308153406
PRIDE:Q9UGM1 DNASU:55584 Ensembl:ENST00000310169 GeneID:55584
KEGG:hsa:55584 UCSC:uc003gva.1 GeneCards:GC04P040337
H-InvDB:HIX0031380 HGNC:HGNC:14079 MIM:605116 neXtProt:NX_Q9UGM1
PharmGKB:PA26493 InParanoid:Q9UGM1 OMA:CAQYKVL PhylomeDB:Q9UGM1
BindingDB:Q9UGM1 ChEMBL:CHEMBL2184 GenomeRNAi:55584 NextBio:60096
Bgee:Q9UGM1 CleanEx:HS_CHRNA9 Genevestigator:Q9UGM1
GermOnline:ENSG00000174343 Uniprot:Q9UGM1
Length = 479
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/293 (35%), Positives = 163/293 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F VEW++ +PAV+N Y CC EPY D+TF + ++R++ FY VN++IPC+ IS
Sbjct: 193 DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVLIS 252
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L+FYLP+ SGEKV+L ++IL+++ VF L+V EI+P S VPL+GKY I M L++
Sbjct: 253 FLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIATMALIT 311
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGG 243
S +T++V+N+HF + + W + V ++++ R+L + Y+ S L+ P
Sbjct: 312 ASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRVLFV----YDVGESCLS--PHHSR 365
Query: 244 SGGSC-KIHGHVSLSNILTEAILSSSPQDD-SKHLRPPAFSHAQCPPVMHRSCFCVRFIA 301
K++ + SN+ S + D +K L+ + P C + +
Sbjct: 366 ERDHLTKVYSKLPESNLKAARNKDLSRKKDMNKRLKNDLGCQGKNPQEAESYCAQYKVLT 425
Query: 302 EHTRMQDDSTKESTLIMVK-EDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+ K+ K +WK VA V+DR F+WIF + V T II +A
Sbjct: 426 RNIEYIAKCLKDHKATNSKGSEWKKVAKVIDRFFMWIFFIMVFVMTILIIARA 478
>MGI|MGI:87890 [details] [associations]
symbol:Chrnb1 "cholinergic receptor, nicotinic, beta
polypeptide 1 (muscle)" species:10090 "Mus musculus" [GO:0001941
"postsynaptic membrane organization" evidence=ISO] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=ISO;IGI] [GO:0006936
"muscle contraction" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISO] [GO:0007274 "neuromuscular synaptic
transmission" evidence=ISO] [GO:0015267 "channel activity"
evidence=ISO] [GO:0015276 "ligand-gated ion channel activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IGI] [GO:0035095 "behavioral response to nicotine"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IMP]
[GO:0042391 "regulation of membrane potential" evidence=IGI]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048747 "muscle fiber development"
evidence=ISO] [GO:0050877 "neurological system process"
evidence=ISO] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:87890 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1140 eggNOG:NOG243276 KO:K04812
OMA:FIDGPNR OrthoDB:EOG4DFPNC GO:GO:0006936 GO:GO:0048747
GO:GO:0001941 EMBL:M14537 EMBL:J04699 EMBL:AK087554 EMBL:AL603707
IPI:IPI00109155 PIR:A33358 RefSeq:NP_033731.3 UniGene:Mm.86425
ProteinModelPortal:P09690 SMR:P09690 MINT:MINT-2983098
STRING:P09690 PhosphoSite:P09690 PRIDE:P09690
Ensembl:ENSMUST00000045971 GeneID:11443 KEGG:mmu:11443
UCSC:uc007jrq.2 InParanoid:Q5F292 BindingDB:P09690
ChEMBL:CHEMBL2690 NextBio:278748 Bgee:P09690 Genevestigator:P09690
GermOnline:ENSMUSG00000041189 Uniprot:P09690
Length = 501
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 114/344 (33%), Positives = 181/344 (52%)
Query: 20 SFYPYHTAARSTEDLSRFKRESSRKN-KDDLSPRRPPHRRERVGVDLSEFYMSVEWDILE 78
+++P+ T S + +SS + K L P R+ V + F + +W+I+
Sbjct: 156 TYFPFDWQ-NCTMVFSSYSYDSSEVSLKTGLDPEG--EERQEVYIHEGTFIENGQWEIIH 212
Query: 79 VPA--VRNEKFYTCCDEPYLD-ITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSD 135
P+ ++ E + + + F + +RRK LFY VN+I PC+ I+ L + FYLP D
Sbjct: 213 KPSRLIQLPGDQRGGKEGHHEEVIFYLIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPD 272
Query: 136 SGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNV 195
+GEK+ LSI L++L VF LL+ + +P TSL VP++ KYL+F M+LV+ S+ ++VVVLN+
Sbjct: 273 AGEKMGLSIFALLTLTVFLLLLADKVPETSLAVPIIIKYLMFTMVLVTFSVILSVVVLNL 332
Query: 196 HFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDG---SHLADGPLIGGSGGSCKIHG 252
H RSP TH+M WV+++FI LP L ++RP D H + P G G+ +
Sbjct: 333 HHRSPHTHQMPFWVRQIFIHKLPPYLGLKRPKPERDQLPEPHHSLSPRSGWGRGTDEYFI 392
Query: 253 HVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQC---PPVMHRSCFCVRFIAEHTRMQDD 309
S+ L + P+ + LR + P + + ++A + Q+D
Sbjct: 393 RKPPSDFLFPKLNRFQPESSAPDLRRFIDGPTRAVGLPQELREVISSISYMARQLQEQED 452
Query: 310 STKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+KEDW++VA+V+DRLFLW F + GT I L A
Sbjct: 453 HDA------LKEDWQFVAMVVDRLFLWTFIVFTSVGTLVIFLDA 490
>MGI|MGI:87893 [details] [associations]
symbol:Chrnd "cholinergic receptor, nicotinic, delta
polypeptide" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA;IPI] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IGI] [GO:0015276
"ligand-gated ion channel activity" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=IGI] [GO:0042166
"acetylcholine binding" evidence=IGI] [GO:0042391 "regulation of
membrane potential" evidence=IGI] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=ISO]
[GO:0050881 "musculoskeletal movement" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87893
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0048630
HOGENOM:HOG000006757 CTD:1144 KO:K04816 OMA:FIVNHMR GO:GO:0050881
eggNOG:NOG294470 EMBL:K02582 EMBL:L10076 EMBL:M22380 EMBL:X13959
IPI:IPI00112987 PIR:A03175 PIR:I49459 RefSeq:NP_067611.2
UniGene:Mm.2811 ProteinModelPortal:P02716 SMR:P02716 STRING:P02716
PhosphoSite:P02716 PRIDE:P02716 Ensembl:ENSMUST00000073252
GeneID:11447 KEGG:mmu:11447 BindingDB:P02716 ChEMBL:CHEMBL4250
NextBio:278756 Bgee:P02716 Genevestigator:P02716
GermOnline:ENSMUSG00000026251 Uniprot:P02716
Length = 520
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 112/308 (36%), Positives = 172/308 (55%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ A N D + D+TF + +RRK LFY +NI++
Sbjct: 199 EWIIIDPEGFTENGEWEIVHRAAKLNVDPSVPMDSTNHQDVTFYLIIRRKPLFYIINILV 258
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP D GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 259 PCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLVGKFLLF 318
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK+ F++ LP++L M RP G
Sbjct: 319 GMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKFFLETLPKLLHMSRPAEEDPGPRA-- 376
Query: 238 GPLIGGS---GGSCKIHGHVSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCP 287
LI S G CK + SL S+++ E S ++ L RPPA S
Sbjct: 377 --LIRRSSSLGYICKAEEYFSLKSRSDLMFEK--QSERHGLARRLTTARRPPASSEQVQQ 432
Query: 288 PVMHRSCFCV---RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLG 344
+ + V FI H R Q+ +E K++W VA +DRL L++ T ++
Sbjct: 433 ELFNEMKPAVDGANFIVNHMRDQNSYNEE------KDNWNQVARTVDRLCLFVVTPVMVV 486
Query: 345 GTAGIILQ 352
GTA I LQ
Sbjct: 487 GTAWIFLQ 494
>UNIPROTKB|I3LPQ6 [details] [associations]
symbol:CHRNA9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 GO:GO:0004889 GO:GO:0050910
GO:GO:0007204 GeneTree:ENSGT00630000089708 OMA:QWARVVI
EMBL:CU407133 Ensembl:ENSSSCT00000032423 Uniprot:I3LPQ6
Length = 482
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 102/294 (34%), Positives = 164/294 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F VEW++ +PAV+N Y CC EPY D+TF + ++R++ FY VN++IPC+ IS
Sbjct: 196 DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVLIS 255
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L+FYLP+ SGEKV+L ++IL+++ VF L+V EI+P S VPL+GKY I M L++
Sbjct: 256 FLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIATMALIT 314
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGG 243
S +T++V+N+HF + + W + V ++++ R+L + Y+ S L GP
Sbjct: 315 ASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRLLFV----YDVGESCL--GPRHDR 368
Query: 244 SGGSC-KIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRF--I 300
G K++G + ++ T A P+ ++ + +C R+ +
Sbjct: 369 ERGRLSKVYGQLPEPDLKT-ARNKDLPRKKERNKLVKNDLRYPGETLQDADSYCARYTVL 427
Query: 301 AEHTRMQDDSTKESTLIMVK-EDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+ K+ K +WK VA V+DR F+W+F + V T II +A
Sbjct: 428 TRNIEYIAKCLKDHKATHSKGSEWKKVAKVIDRFFMWVFFIMVFVMTILIIARA 481
>UNIPROTKB|F1SMT3 [details] [associations]
symbol:CHRND "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050881 "musculoskeletal movement" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GO:GO:0005892 GO:GO:0048630
GeneTree:ENSGT00620000087691 CTD:1144 KO:K04816 OMA:FIVNHMR
GO:GO:0050881 EMBL:CU855838 RefSeq:XP_003133778.3
Ensembl:ENSSSCT00000017736 GeneID:100522042 KEGG:ssc:100522042
Uniprot:F1SMT3
Length = 517
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 110/306 (35%), Positives = 171/306 (55%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYL-DITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ PA N D P D+TF + +RRK LFY +NI++
Sbjct: 196 EWIIIDPEGFTENGEWEIVHRPARVNVDPSAPLDSPSRQDVTFYLIIRRKPLFYVINILV 255
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP+D GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 256 PCVLISFMINLVFYLPADCGEKTSMAISVLLAQSVFLLLISKRLPATSMAIPLIGKFLLF 315
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK++F++ LP +L M RP DG +
Sbjct: 316 GMVLVAMVVVICVIVLNIHFRTPSTHVLSDGVKQLFLETLPEVLHMSRPA--EDGP--SP 371
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHL--------RPPAFS-HAQCP- 287
G L+ S I ++ + + L Q + L RPPA S AQ
Sbjct: 372 GALVRRSSSLGYISKAEEYFSVKSRSDLMFEKQSERHGLARRLTTARRPPAGSDQAQQEL 431
Query: 288 -PVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGT 346
+ + FI H + Q++ E K+ W VA +DRL L++ T ++ GT
Sbjct: 432 FSELKPAVDGANFIVNHMKDQNNYNDE------KDCWNRVARTVDRLCLFVVTPIMVVGT 485
Query: 347 AGIILQ 352
A I LQ
Sbjct: 486 AWIFLQ 491
>UNIPROTKB|I3L9G3 [details] [associations]
symbol:CHRNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048747 "muscle fiber development" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0001941
"postsynaptic membrane organization" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087691 KO:K04812 OMA:FIDGPNR
GO:GO:0006936 GO:GO:0048747 GO:GO:0001941 EMBL:FP565284
RefSeq:XP_003483146.1 Ensembl:ENSSSCT00000029953 GeneID:100739757
KEGG:ssc:100739757 Uniprot:I3L9G3
Length = 505
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 116/348 (33%), Positives = 183/348 (52%)
Query: 20 SFYPYHTAARSTEDLSRFKRESSRKN-KDDLSPRRPPHRRERVGVDLSEFYMSVEWDILE 78
+++P+ T S + +SS + + L P R+ V + F + +W+I+
Sbjct: 157 TYFPFDWQ-NCTMVFSSYSYDSSEVSLQTGLGP--DGQERQEVHIHEGTFIENGQWEIIH 213
Query: 79 VPA--VRNEKFYTCCDEPYLD-ITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSD 135
P+ ++ E + +TF + +RRK LFY VN+I PC+ I+ L + FYLP D
Sbjct: 214 KPSRLIQPPADPRGGGEGRREEVTFYLIIRRKPLFYLVNVIAPCILITILAIFVFYLPPD 273
Query: 136 SGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNV 195
+GEK+ LSI L++L VF LL+ + +P TSL VP++ KYL+F M+LV+ S+ ++VVVLN+
Sbjct: 274 AGEKMGLSIFALLTLTVFLLLLADKVPETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNL 333
Query: 196 HFRSPQTHKMAPWVKRVFIQFLPRILVMRRP------LYNPDGSHLADGPLIGGSGGSCK 249
H RSP TH+M WV+++FI LP L ++RP + P L D P G G+ +
Sbjct: 334 HHRSPHTHQMPLWVRQIFILKLPLYLGLKRPKPERDQMPEPPPVALRDSPGSGWGRGTDE 393
Query: 250 IHGHVSLSNILTEAILSSSPQ----DDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTR 305
++ L P+ D + + P + PP + + +IA +
Sbjct: 394 YFIRKPPNDFLFLKPNRFQPELSAPDPRRFVDGPNRA-VGLPPELREVVSSISYIARQLQ 452
Query: 306 MQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
Q+D +KEDW++VA+V+DRLFLW F + GT I L A
Sbjct: 453 EQEDHDA------LKEDWQFVAMVVDRLFLWTFIIFTSVGTLVIFLDA 494
>RGD|2349 [details] [associations]
symbol:Chrnb1 "cholinergic receptor, nicotinic, beta 1 (muscle)"
species:10116 "Rattus norvegicus" [GO:0001941 "postsynaptic membrane
organization" evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA;ISO] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006936 "muscle contraction" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IEA;ISO] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0015267
"channel activity" evidence=ISO] [GO:0015276 "ligand-gated ion
channel activity" evidence=IDA] [GO:0015464 "acetylcholine receptor
activity" evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IEA;ISO] [GO:0042391 "regulation of
membrane potential" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048747 "muscle fiber development" evidence=IEA;ISO] [GO:0050877
"neurological system process" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2349 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1140 eggNOG:NOG243276 KO:K04812
OMA:FIDGPNR OrthoDB:EOG4DFPNC GO:GO:0006936 GO:GO:0048747
GO:GO:0001941 EMBL:X74833 IPI:IPI00215165 PIR:S13873
RefSeq:NP_036660.1 UniGene:Rn.44611 ProteinModelPortal:P25109
SMR:P25109 STRING:P25109 PRIDE:P25109 Ensembl:ENSRNOT00000019947
GeneID:24261 KEGG:rno:24261 UCSC:RGD:2349 InParanoid:P25109
BindingDB:P25109 ChEMBL:CHEMBL2666 NextBio:602809
Genevestigator:P25109 GermOnline:ENSRNOG00000014698 Uniprot:P25109
Length = 501
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 113/345 (32%), Positives = 178/345 (51%)
Query: 20 SFYPYHTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRRERVGVDLSEFYMSVEWDILEV 79
+++P+ T S + +SS + P R+ + + F + +W+I+
Sbjct: 156 TYFPFDWQ-NCTMVFSSYSYDSSEVSLKT-GPDPDGQERQEIYIHEGTFIENGQWEIIHK 213
Query: 80 PA--VRNEKFYTCCDEPYLD-ITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDS 136
P+ + E + + + F + +RRK LFY VN+I PC+ I+ L + FYLP D+
Sbjct: 214 PSRLIHLPGDRRGGKEGHREEVIFYLIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPDA 273
Query: 137 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVH 196
GEK+ LSI L++L VF LL+ + +P TSL VP++ KYL+F MILV+ S+ ++VVVLN+H
Sbjct: 274 GEKMGLSIFALLTLTVFLLLLADKVPETSLAVPIIIKYLMFTMILVTFSVILSVVVLNLH 333
Query: 197 FRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDG---SHLADGPLIGGSGGSCKIHGH 253
RSP TH+M WV+++FI LP L ++RP D H + P G G+ +
Sbjct: 334 HRSPHTHQMPFWVRQIFIHKLPPYLGLKRPKPERDQLPEPHHSFSPRSGWGRGTDEYFIR 393
Query: 254 VSLSNILTEAILSSSPQDDSKHLR-----PPAFSHAQCPPVMHRSCFCVRFIAEHTRMQD 308
+ L + P+ + LR PP P + + ++A + Q+
Sbjct: 394 KPPCDFLFPKLNRFQPESPAPDLRRFIDGPPRA--VGLPQELREVISSISYMARQLQEQE 451
Query: 309 DSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
D +KEDW++VA+V+DRLFLW F + GT I L A
Sbjct: 452 DHDA------LKEDWQFVAMVVDRLFLWTFIVFTSVGTLVIFLDA 490
>UNIPROTKB|F1NIT6 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:AADN02040457 IPI:IPI00821054 Ensembl:ENSGALT00000039779
ArrayExpress:F1NIT6 Uniprot:F1NIT6
Length = 325
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 80/167 (47%), Positives = 119/167 (71%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E VD +F+ + EW+I+ + + CC P+ +T++ +RR LFYT+ +IIP
Sbjct: 161 EDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPF--VTYSFIIRRLPLFYTLFLIIP 218
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+G+SFLTVL FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F
Sbjct: 219 CIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFT 278
Query: 179 MILVSISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
MI V++SI +TV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 279 MIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 325
>UNIPROTKB|F1NIT7 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:AADN02040457 IPI:IPI00820377 Ensembl:ENSGALT00000039778
ArrayExpress:F1NIT7 Uniprot:F1NIT7
Length = 310
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 80/167 (47%), Positives = 119/167 (71%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E VD +F+ + EW+I+ + + CC P+ +T++ +RR LFYT+ +IIP
Sbjct: 146 EDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPF--VTYSFIIRRLPLFYTLFLIIP 203
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+G+SFLTVL FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F
Sbjct: 204 CIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFT 263
Query: 179 MILVSISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMR 224
MI V++SI +TV +N+H RS TH MAPWV+++F+ LP++L MR
Sbjct: 264 MIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMR 310
>ZFIN|ZDB-GENE-090312-63 [details] [associations]
symbol:chrna9 "cholinergic receptor, nicotinic,
alpha 9" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-090312-63 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 EMBL:CR759875 IPI:IPI00998653
ProteinModelPortal:E9QBV8 Ensembl:ENSDART00000140706 Uniprot:E9QBV8
Length = 548
Score = 379 (138.5 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 67/157 (42%), Positives = 107/157 (68%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F +VEW+ +PAV+N Y CC +PY DIT+ + ++R++ FY N+++PC IS
Sbjct: 156 DLSDFVDNVEWECHGMPAVKNVIMYGCCSDPYPDITYTVLLKRRSSFYIFNLLLPCFLIS 215
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L FYLP+DSGEKV+L +++L++L VF L+V E +PP+ V PL+GKY I M +++
Sbjct: 216 FLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAESMPPSESV-PLIGKYYIATMTMIT 274
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRI 220
S +T+ ++N+HF + + W K + I ++ +I
Sbjct: 275 ASTSLTIFIMNIHFCGAEAKPVPHWAKVLIIDYMSKI 311
Score = 70 (29.7 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 322 DWKYVALVLDRLFLWIFTLAV 342
+WK VA V+DR F+W+F + V
Sbjct: 516 EWKKVAKVMDRFFMWVFFIMV 536
>ZFIN|ZDB-GENE-030131-6665 [details] [associations]
symbol:chrnd "cholinergic receptor, nicotinic,
delta polypeptide" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA;IMP] [GO:0030239 "myofibril
assembly" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IEA;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-030131-6665 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030239 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1144 KO:K04816 OMA:FIVNHMR
EMBL:CU929293 EMBL:AB120372 IPI:IPI00862165 RefSeq:NP_996947.1
UniGene:Dr.87 HSSP:P25110 SMR:Q75XT1 STRING:Q75XT1
Ensembl:ENSDART00000015391 GeneID:404273 KEGG:dre:404273
InParanoid:Q75XT1 NextBio:20817635 Uniprot:Q75XT1
Length = 518
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 108/308 (35%), Positives = 171/308 (55%)
Query: 56 HRRERVGVDLSEFYMSVEWDILEVPAVRN-EKFYTCCDEPYLDITFNITMRRKTLFYTVN 114
++ E + +D F + EW+I+ PA RN K + DITF + ++RK LFY VN
Sbjct: 192 YKVEWIIIDPEGFTENGEWEIVHKPARRNIYKSIPKESNKHQDITFYLIIKRKPLFYIVN 251
Query: 115 IIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKY 174
IIIPC+ ISFL L +YLP+DSGEK+TLSIS+L++ VF LL+ + +P TS+ VPL+ KY
Sbjct: 252 IIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQRLPETSMAVPLIVKY 311
Query: 175 LIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN---PD 231
L+F M+LV++ + V+VLN+HFR+P TH M W K F++ LPR+L M P+ + P+
Sbjct: 312 LMFIMVLVTVVVLNCVIVLNLHFRTPSTHVMTEWTKEFFLERLPRLLHMSLPVEDQPVPE 371
Query: 232 GSHLADGPLIGGSGGSCKIHGHVSLSNILTEAI-----LSSSPQDDSKHLRP-PAFSHAQ 285
+ +G + + + S S ++ E L++ P + + + Q
Sbjct: 372 SALPRRSSSLGYIAQAEEYYSVKSRSELMFEKQSERHGLAARPTPKATYTSSNDSEVSEQ 431
Query: 286 CPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGG 345
M + +I +H ++D +E K++W +A +DRL ++ T ++ G
Sbjct: 432 LYNEMKPAVEGANYIVKHMHDKNDYNEE------KDNWSGIARTVDRLCFYVVTPVMMIG 485
Query: 346 TAGIILQA 353
T I L A
Sbjct: 486 TICIFLMA 493
>RGD|620142 [details] [associations]
symbol:Chrna10 "cholinergic receptor, nicotinic, alpha 10
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006812 "cation transport" evidence=ISO] [GO:0007204 "elevation
of cytosolic calcium ion concentration" evidence=IEA;ISO]
[GO:0007271 "synaptic transmission, cholinergic" evidence=ISO;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=IEA;ISO] [GO:0043204
"perikaryon" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:620142
GO:GO:0016021 GO:GO:0005886 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0043204
GO:GO:0007271 GO:GO:0042472 CTD:57053 HOVERGEN:HBG003756 KO:K04811
GO:GO:0004889 eggNOG:NOG306809 HOGENOM:HOG000006756 OMA:DGAVRWD
OrthoDB:EOG4S7JQ0 GO:GO:0050910 GO:GO:0007204 EMBL:AF196344
IPI:IPI00203474 RefSeq:NP_072161.1 UniGene:Rn.48767
ProteinModelPortal:Q9JLB5 PRIDE:Q9JLB5 Ensembl:ENSRNOT00000027507
GeneID:64574 KEGG:rno:64574 UCSC:RGD:620142
GeneTree:ENSGT00630000089708 InParanoid:Q9JLB5 BindingDB:Q9JLB5
ChEMBL:CHEMBL3461 NextBio:613536 Genevestigator:Q9JLB5
GermOnline:ENSRNOG00000020293 Uniprot:Q9JLB5
Length = 447
Score = 362 (132.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 65/168 (38%), Positives = 106/168 (63%)
Query: 57 RRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
R L++F +VEW +L +PA R Y CC EPY D+TF + +RR+ Y N++
Sbjct: 185 RPRGTSASLADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLL 244
Query: 117 IPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
+PC+ IS L L F+LP+DSGEKV+L +++L++L VF L++ E +PP V PL+GKY +
Sbjct: 245 LPCVFISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLILAESMPPAESV-PLIGKYYM 303
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR 224
M +V+ S +T++++N+H+ P H + W + + + L + L +R
Sbjct: 304 ATMTMVTFSTALTILIMNLHYCGPNAHPVPAWARVLLLGHLAKGLCVR 351
Score = 86 (35.3 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 29/89 (32%), Positives = 40/89 (44%)
Query: 267 SSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVK--EDWK 324
S P + + L+PP S A P C C + H ST S + EDWK
Sbjct: 360 SKPLESAPSLQPPPASPAG--PCHEPRCLCHQEALLHHIASIASTFRSHRAAQRRHEDWK 417
Query: 325 YVALVLDRLFLWIFTLAVLGGTAGIILQA 353
+A V+DR FL IF L + +++QA
Sbjct: 418 RLARVMDRFFLGIFFCMALVMSLIVLVQA 446
>UNIPROTKB|E2QZ91 [details] [associations]
symbol:CHRNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
Ensembl:ENSCAFT00000025890 Uniprot:E2QZ91
Length = 508
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 118/320 (36%), Positives = 173/320 (54%)
Query: 55 PHRRERVGVDLSE--FYMSVEWDILEVPA--VRNEKFYTCCDEPYL-DITFNITMRRKTL 109
P R+E V + E F + +W+I+ P+ V+ E ++TF + +RRK L
Sbjct: 187 PDRQELQEVHIHEGTFIENGQWEIIHKPSRLVQPPVDPRRGGEGQRQEVTFYLIIRRKPL 246
Query: 110 FYTVNIIIPCMGISFLTVLTFYLPSDS---GEKVTLSISILISLHVFFLLVVEIIPPTSL 166
FY VN+I PC+ I+ L + FYLP D+ GEK+ LSI L++L VF LL+ + +P TSL
Sbjct: 247 FYLVNVIAPCILITLLAIFVFYLPPDAALQGEKMGLSIFALLTLTVFLLLLADKVPETSL 306
Query: 167 VVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKR-VFIQFLPRILVMRR 225
VP++ KYL+F MILV+ S+ ++VVVLN+H RSP TH+M WV++ +FI LP L ++R
Sbjct: 307 SVPIIIKYLMFTMILVTFSVILSVVVLNLHHRSPHTHQMPTWVRQQIFIHKLPLYLGLKR 366
Query: 226 P------LYNPDGSHLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLR-- 277
P + P L D P G G+ + L++ L P+ + LR
Sbjct: 367 PKPERDLMPEPPPVALRDSPGSGWGRGTDEYFIRKPLNDFLFPKPNRFQPELSAPDLRRL 426
Query: 278 ---P-PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRL 333
P PA PP + + +IA + Q+D +KEDW++VA+V+DRL
Sbjct: 427 VDGPNPAVG---LPPELREVVSSISYIARQLQEQEDHHA------LKEDWQFVAMVVDRL 477
Query: 334 FLWIFTLAVLGGTAGIILQA 353
FLW F + GT I L A
Sbjct: 478 FLWTFIIFTSVGTLVIFLDA 497
>UNIPROTKB|F1NIT9 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:AADN02040457 IPI:IPI00822298 Ensembl:ENSGALT00000039776
ArrayExpress:F1NIT9 Uniprot:F1NIT9
Length = 320
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 79/166 (47%), Positives = 118/166 (71%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E VD +F+ + EW+I+ + + CC P+ +T++ +RR LFYT+ +IIP
Sbjct: 157 EDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPF--VTYSFIIRRLPLFYTLFLIIP 214
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
C+G+SFLTVL FYLPS+ GEK++L S+L+SL VF L++ EIIP +S V+PL+G+YL+F
Sbjct: 215 CIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFT 274
Query: 179 MILVSISICVTVVVLNVHFRSPQTHK-MAPWVKRVFIQFLPRILVM 223
MI V++SI +TV +N+H RS TH MAPWV+++F+ LP++L M
Sbjct: 275 MIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCM 320
>UNIPROTKB|Q9PTS8 [details] [associations]
symbol:CHRNA9 "Neuronal acetylcholine receptor subunit
alpha-9" species:9031 "Gallus gallus" [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 GO:GO:0007204
GeneTree:ENSGT00630000089708 EMBL:AF082192 IPI:IPI00593177
RefSeq:NP_990091.1 UniGene:Gga.283 ProteinModelPortal:Q9PTS8
PRIDE:Q9PTS8 Ensembl:ENSGALT00000023080 GeneID:395522
KEGG:gga:395522 CTD:55584 InParanoid:Q9PTS8 KO:K04810 OMA:QWARVVI
OrthoDB:EOG470TH4 NextBio:20815600 Uniprot:Q9PTS8
Length = 484
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 99/287 (34%), Positives = 158/287 (55%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS+F VEW+I +PAV+N Y CC EPY D+TF + ++RK+ FY N+++PC+ IS
Sbjct: 195 DLSDFVEDVEWEIHGMPAVKNVITYGCCSEPYPDVTFTLILKRKSSFYIFNLLLPCILIS 254
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL L FYLP+DSGEKV+L +++L++L VF L+V EI+PP+ V PL+GKY I M +++
Sbjct: 255 FLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAEIMPPSENV-PLIGKYYIATMTMIT 313
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYN---PDGSHLADGPL 240
S +T++++NVH + + W + V + ++ +I + N P + L
Sbjct: 314 ASTALTIIIMNVHHCGSEAKPVPQWARVVILDYMSKIFFVYDVGENCTSPRREKEQEHRL 373
Query: 241 IGGS---GGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFS-HAQCPPVMHRSCFC 296
GG GG K H LS+ ++ L + + +F H + C C
Sbjct: 374 EGGDMCRGGDGKSH----LSSRNDDSDLKENLNGNWNK----SFGVHGENVRENVNCCSC 425
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKE-DWKYVALVLDRLFLWIFTLAV 342
+ + ++ + ++ K +WK VA V+DR F+WIF + V
Sbjct: 426 YKMLIKNIEYIANCVRDHKANRAKGIEWKKVAKVMDRFFMWIFFIMV 472
>RGD|2352 [details] [associations]
symbol:Chrnd "cholinergic receptor, nicotinic, delta (muscle)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO;IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA;ISO]
[GO:0006812 "cation transport" evidence=ISO] [GO:0015276
"ligand-gated ion channel activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IEA;ISO]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048630
"skeletal muscle tissue growth" evidence=IEA;ISO] [GO:0050881
"musculoskeletal movement" evidence=IEA;ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2352 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006757 CTD:1144 KO:K04816
eggNOG:NOG294470 EMBL:X74835 EMBL:X66531 IPI:IPI00215183 PIR:S13875
RefSeq:NP_062171.1 UniGene:Rn.41469 PDB:1A11 PDB:1CEK PDBsum:1A11
PDBsum:1CEK ProteinModelPortal:P25110 SMR:P25110 STRING:P25110
PRIDE:P25110 GeneID:54240 KEGG:rno:54240 UCSC:RGD:2352
ChEMBL:CHEMBL3742 EvolutionaryTrace:P25110 NextBio:610696
ArrayExpress:P25110 Genevestigator:P25110
GermOnline:ENSRNOG00000019527 Uniprot:P25110
Length = 517
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 110/315 (34%), Positives = 173/315 (54%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ A N D + D+TF + +RRK LFY +NI++
Sbjct: 196 EWIIIDPEGFTENGEWEIVHRAAKVNVDPSVPMDSTNHQDVTFYLIIRRKPLFYIINILV 255
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP D GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 256 PCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLVGKFLLF 315
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK+ F++ LP++L M RP G A
Sbjct: 316 GMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKFFLETLPKLLHMSRPEEEDPGPR-AL 374
Query: 238 GPLIGGSGGSCKIHGHVSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCPPVM 290
G K + SL S+++ E S ++ L +PPA S +
Sbjct: 375 IRRTSSLGYISKAEEYFSLKSRSDLMFEK--QSERHGLARRLTTARKPPASSEQVQQELF 432
Query: 291 HRSCFCV---RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTA 347
+ V FI H R Q+ +E K++W VA +DRL L++ T ++ GTA
Sbjct: 433 NEMKPAVDGANFIVNHMRDQNSYNEE------KDNWNQVARTVDRLCLFVVTPVMVVGTA 486
Query: 348 GIILQAPSLYDDRVP 362
I LQ +Y+ P
Sbjct: 487 WIFLQG--VYNQPPP 499
>UNIPROTKB|F1M519 [details] [associations]
symbol:Chrnd "Acetylcholine receptor subunit delta"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2352 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GO:GO:0005892 GO:GO:0048630 OMA:FIVNHMR GO:GO:0050881
IPI:IPI00392804 ProteinModelPortal:F1M519
Ensembl:ENSRNOT00000036369 ArrayExpress:F1M519 Uniprot:F1M519
Length = 545
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 110/315 (34%), Positives = 173/315 (54%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ A N D + D+TF + +RRK LFY +NI++
Sbjct: 224 EWIIIDPEGFTENGEWEIVHRAAKVNVDPSVPMDSTNHQDVTFYLIIRRKPLFYIINILV 283
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP D GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 284 PCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLVGKFLLF 343
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK+ F++ LP++L M RP G A
Sbjct: 344 GMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKFFLETLPKLLHMSRPEEEDPGPR-AL 402
Query: 238 GPLIGGSGGSCKIHGHVSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCPPVM 290
G K + SL S+++ E S ++ L +PPA S +
Sbjct: 403 IRRTSSLGYISKAEEYFSLKSRSDLMFEK--QSERHGLARRLTTARKPPASSEQVQQELF 460
Query: 291 HRSCFCV---RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTA 347
+ V FI H R Q+ +E K++W VA +DRL L++ T ++ GTA
Sbjct: 461 NEMKPAVDGANFIVNHMRDQNSYNEE------KDNWNQVARTVDRLCLFVVTPVMVVGTA 514
Query: 348 GIILQAPSLYDDRVP 362
I LQ +Y+ P
Sbjct: 515 WIFLQG--VYNQPPP 527
>UNIPROTKB|P25110 [details] [associations]
symbol:Chrnd "Acetylcholine receptor subunit delta"
species:10116 "Rattus norvegicus" [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0050881 "musculoskeletal movement" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2352
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 CTD:1144 KO:K04816 eggNOG:NOG294470
EMBL:X74835 EMBL:X66531 IPI:IPI00215183 PIR:S13875
RefSeq:NP_062171.1 UniGene:Rn.41469 PDB:1A11 PDB:1CEK PDBsum:1A11
PDBsum:1CEK ProteinModelPortal:P25110 SMR:P25110 STRING:P25110
PRIDE:P25110 GeneID:54240 KEGG:rno:54240 UCSC:RGD:2352
ChEMBL:CHEMBL3742 EvolutionaryTrace:P25110 NextBio:610696
ArrayExpress:P25110 Genevestigator:P25110
GermOnline:ENSRNOG00000019527 Uniprot:P25110
Length = 517
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 110/315 (34%), Positives = 173/315 (54%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW+I+ A N D + D+TF + +RRK LFY +NI++
Sbjct: 196 EWIIIDPEGFTENGEWEIVHRAAKVNVDPSVPMDSTNHQDVTFYLIIRRKPLFYIINILV 255
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
PC+ ISF+ L FYLP D GEK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F
Sbjct: 256 PCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLVGKFLLF 315
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M+LV++ + + V+VLN+HFR+P TH ++ VK+ F++ LP++L M RP G A
Sbjct: 316 GMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKFFLETLPKLLHMSRPEEEDPGPR-AL 374
Query: 238 GPLIGGSGGSCKIHGHVSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCPPVM 290
G K + SL S+++ E S ++ L +PPA S +
Sbjct: 375 IRRTSSLGYISKAEEYFSLKSRSDLMFEK--QSERHGLARRLTTARKPPASSEQVQQELF 432
Query: 291 HRSCFCV---RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTA 347
+ V FI H R Q+ +E K++W VA +DRL L++ T ++ GTA
Sbjct: 433 NEMKPAVDGANFIVNHMRDQNSYNEE------KDNWNQVARTVDRLCLFVVTPVMVVGTA 486
Query: 348 GIILQAPSLYDDRVP 362
I LQ +Y+ P
Sbjct: 487 WIFLQG--VYNQPPP 499
>WB|WBGene00001133 [details] [associations]
symbol:eat-2 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0007274 "neuromuscular synaptic
transmission" evidence=IEP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IGI;IMP] [GO:0001508 "regulation of action
potential" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0007274 GO:GO:0031594
GO:GO:0040014 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 GO:GO:0005892 GO:GO:0043051
eggNOG:NOG267445 GO:GO:0045203 GO:GO:0048609 GO:GO:0043050
EMBL:AL110490 PIR:T27006 RefSeq:NP_496959.1
ProteinModelPortal:Q9U298 SMR:Q9U298 EnsemblMetazoa:Y48B6A.4
GeneID:175072 KEGG:cel:CELE_Y48B6A.4 UCSC:Y48B6A.4 CTD:175072
WormBase:Y48B6A.4 InParanoid:Q9U298 OMA:FNSANEH NextBio:886636
GO:GO:0001508 Uniprot:Q9U298
Length = 474
Score = 344 (126.2 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 60/164 (36%), Positives = 110/164 (67%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
+DL + + E+D+L PA R K T DE Y+++ F++ ++R+T++Y +N I+P + I
Sbjct: 191 MDLQYYIPNGEFDLLATPAFR--KSTTFLDETYVELYFHMHLKRRTMYYGLNWIVPSILI 248
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S +L F +P + GEK+TL I+ +S+ VF +V E+ PPTS +P++ + +++++
Sbjct: 249 SLSNILGFTMPPECGEKITLQITNFLSVMVFLAMVSEVAPPTSESIPIIAAFFSLSIVIL 308
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+SIC +++++N+ FR P+TH+M W + VF+++LP L+M RP
Sbjct: 309 GLSICASLIIVNIFFRHPKTHRMGDWTRYVFLEWLPWFLLMSRP 352
Score = 100 (40.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 305 RMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVPID 364
++ DD +E ++ +W+++A+V+DRL L++FT + G TA I P+L+ D +D
Sbjct: 417 KLDDDEEEEEEIL----NWRFMAMVIDRLSLFLFTGLIFGTTALIFAFCPNLFTDSPIVD 472
>UNIPROTKB|Q9U298 [details] [associations]
symbol:eat-2 "Neuronal acetylcholine receptor subunit
eat-2" species:6239 "Caenorhabditis elegans" [GO:0048609
"multicellular organismal reproductive process" evidence=IMP]
[GO:0043050 "pharyngeal pumping" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0045203
"integral to cell outer membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IMP] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0007274 GO:GO:0031594
GO:GO:0040014 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 GO:GO:0005892 GO:GO:0043051
eggNOG:NOG267445 GO:GO:0045203 GO:GO:0048609 GO:GO:0043050
EMBL:AL110490 PIR:T27006 RefSeq:NP_496959.1
ProteinModelPortal:Q9U298 SMR:Q9U298 EnsemblMetazoa:Y48B6A.4
GeneID:175072 KEGG:cel:CELE_Y48B6A.4 UCSC:Y48B6A.4 CTD:175072
WormBase:Y48B6A.4 InParanoid:Q9U298 OMA:FNSANEH NextBio:886636
GO:GO:0001508 Uniprot:Q9U298
Length = 474
Score = 344 (126.2 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 60/164 (36%), Positives = 110/164 (67%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
+DL + + E+D+L PA R K T DE Y+++ F++ ++R+T++Y +N I+P + I
Sbjct: 191 MDLQYYIPNGEFDLLATPAFR--KSTTFLDETYVELYFHMHLKRRTMYYGLNWIVPSILI 248
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S +L F +P + GEK+TL I+ +S+ VF +V E+ PPTS +P++ + +++++
Sbjct: 249 SLSNILGFTMPPECGEKITLQITNFLSVMVFLAMVSEVAPPTSESIPIIAAFFSLSIVIL 308
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+SIC +++++N+ FR P+TH+M W + VF+++LP L+M RP
Sbjct: 309 GLSICASLIIVNIFFRHPKTHRMGDWTRYVFLEWLPWFLLMSRP 352
Score = 100 (40.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 305 RMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDDRVPID 364
++ DD +E ++ +W+++A+V+DRL L++FT + G TA I P+L+ D +D
Sbjct: 417 KLDDDEEEEEEIL----NWRFMAMVIDRLSLFLFTGLIFGTTALIFAFCPNLFTDSPIVD 472
>UNIPROTKB|B7Z5H1 [details] [associations]
symbol:CHRNB1 "cDNA FLJ52354, highly similar to
Acetylcholine receptor protein subunit beta" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 UniGene:Hs.330386 HGNC:HGNC:1961
EMBL:AC113189 EMBL:AK298938 IPI:IPI01013096 SMR:B7Z5H1
STRING:B7Z5H1 Ensembl:ENST00000536404 Uniprot:B7Z5H1
Length = 429
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 103/266 (38%), Positives = 153/266 (57%)
Query: 97 DITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLL 156
++ F + +RRK LFY VN+I PC+ I+ L + FYLP D+GEK+ LSI L++L VF LL
Sbjct: 162 EVIFYLIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLL 221
Query: 157 VVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQF 216
+ + +P TSL VP++ KYL+F M+LV+ S+ ++VVVLN+H RSP TH+M WV+++FI
Sbjct: 222 LADKVPETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHK 281
Query: 217 LPRILVMRRPLYNPDGSHLADGPLIG--GSG---GSCKIHGHVSLSNILTEAILSSSPQD 271
LP L ++RP P+ + + P GSG G+ + S+ L P+
Sbjct: 282 LPLYLRLKRP--KPERDLMPEPPHCSSPGSGWGRGTDEYFIRKPPSDFLFPKPNRFQPEL 339
Query: 272 DSKHLRP----PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVA 327
+ LR P + A P + + +IA + Q+D +KEDW++VA
Sbjct: 340 SAPDLRRFIDGPNRAVALLPE-LREVVSSISYIARQLQEQEDHDA------LKEDWQFVA 392
Query: 328 LVLDRLFLWIFTLAVLGGTAGIILQA 353
+V+DRLFLW F + GT I L A
Sbjct: 393 MVVDRLFLWTFIIFTSVGTLVIFLDA 418
>UNIPROTKB|P11230 [details] [associations]
symbol:CHRNB1 "Acetylcholine receptor subunit beta"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048747 "muscle fiber development" evidence=IMP] [GO:0042166
"acetylcholine binding" evidence=ISS] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IMP] [GO:0006812 "cation
transport" evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IMP]
[GO:0045202 "synapse" evidence=IMP] [GO:0015276 "ligand-gated ion
channel activity" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IMP] [GO:0015464 "acetylcholine receptor activity"
evidence=IMP] [GO:0006936 "muscle contraction" evidence=IMP]
[GO:0035095 "behavioral response to nicotine" evidence=IMP]
[GO:0050877 "neurological system process" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=ISS] [GO:0001941
"postsynaptic membrane organization" evidence=IMP] [GO:0015267
"channel activity" evidence=IMP] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007165 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0045202 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 MIM:601462 Orphanet:98913 HOGENOM:HOG000006757
CTD:1140 eggNOG:NOG243276 KO:K04812 OMA:FIDGPNR OrthoDB:EOG4DFPNC
GO:GO:0006936 GO:GO:0048747 GO:GO:0001941 EMBL:X14830 EMBL:BC011371
IPI:IPI00298986 PIR:S04607 RefSeq:NP_000738.2 UniGene:Hs.330386
ProteinModelPortal:P11230 SMR:P11230 IntAct:P11230 STRING:P11230
PhosphoSite:P11230 DMDM:21903373 PRIDE:P11230 DNASU:1140
Ensembl:ENST00000306071 GeneID:1140 KEGG:hsa:1140 UCSC:uc002ghb.3
GeneCards:GC17P007348 HGNC:HGNC:1961 HPA:CAB011200 HPA:HPA005822
MIM:100710 MIM:608931 neXtProt:NX_P11230 PharmGKB:PA26494
InParanoid:P11230 PhylomeDB:P11230 BindingDB:P11230
ChEMBL:CHEMBL3355 GenomeRNAi:1140 NextBio:4744 ArrayExpress:P11230
Bgee:P11230 CleanEx:HS_CHRNB1 Genevestigator:P11230
GermOnline:ENSG00000170175 GO:GO:0015276 Uniprot:P11230
Length = 501
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 103/266 (38%), Positives = 153/266 (57%)
Query: 97 DITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLL 156
++ F + +RRK LFY VN+I PC+ I+ L + FYLP D+GEK+ LSI L++L VF LL
Sbjct: 234 EVIFYLIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLL 293
Query: 157 VVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQF 216
+ + +P TSL VP++ KYL+F M+LV+ S+ ++VVVLN+H RSP TH+M WV+++FI
Sbjct: 294 LADKVPETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHK 353
Query: 217 LPRILVMRRPLYNPDGSHLADGPLIG--GSG---GSCKIHGHVSLSNILTEAILSSSPQD 271
LP L ++RP P+ + + P GSG G+ + S+ L P+
Sbjct: 354 LPLYLRLKRP--KPERDLMPEPPHCSSPGSGWGRGTDEYFIRKPPSDFLFPKPNRFQPEL 411
Query: 272 DSKHLRP----PAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVA 327
+ LR P + A P + + +IA + Q+D +KEDW++VA
Sbjct: 412 SAPDLRRFIDGPNRAVALLPE-LREVVSSISYIARQLQEQEDHDA------LKEDWQFVA 464
Query: 328 LVLDRLFLWIFTLAVLGGTAGIILQA 353
+V+DRLFLW F + GT I L A
Sbjct: 465 MVVDRLFLWTFIIFTSVGTLVIFLDA 490
>UNIPROTKB|Q9GZZ6 [details] [associations]
symbol:CHRNA10 "Neuronal acetylcholine receptor subunit
alpha-10" species:9606 "Homo sapiens" [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0042472 "inner
ear morphogenesis" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007271 "synaptic transmission, cholinergic"
evidence=TAS] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0042127 "regulation of cell proliferation" evidence=TAS]
[GO:0016020 "membrane" evidence=TAS] [GO:0007204 "elevation of
cytosolic calcium ion concentration" evidence=IGI]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0016020 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 DrugBank:DB01161
DrugBank:DB00721 GO:GO:0005102 GO:GO:0007271 GO:GO:0042127
GO:GO:0042472 CTD:57053 HOVERGEN:HBG003756 KO:K04811 GO:GO:0004889
EMBL:AJ278118 EMBL:AF199235 EMBL:AF327367 EMBL:AJ295237
IPI:IPI00026461 RefSeq:NP_065135.2 UniGene:Hs.732806
ProteinModelPortal:Q9GZZ6 SMR:Q9GZZ6 STRING:Q9GZZ6 DMDM:14916526
PRIDE:Q9GZZ6 DNASU:57053 Ensembl:ENST00000250699 GeneID:57053
KEGG:hsa:57053 UCSC:uc001lyf.3 GeneCards:GC11M003687
HGNC:HGNC:13800 MIM:606372 neXtProt:NX_Q9GZZ6 PharmGKB:PA26488
eggNOG:NOG306809 HOGENOM:HOG000006756 InParanoid:Q9GZZ6 OMA:DGAVRWD
OrthoDB:EOG4S7JQ0 PhylomeDB:Q9GZZ6 BindingDB:Q9GZZ6
ChEMBL:CHEMBL2551 DrugBank:DB00333 DrugBank:DB00184
DrugBank:DB01090 DrugBank:DB01116 GenomeRNAi:57053 NextBio:62824
ArrayExpress:Q9GZZ6 Bgee:Q9GZZ6 CleanEx:HS_CHRNA10
Genevestigator:Q9GZZ6 GermOnline:ENSG00000129749 GO:GO:0050910
GO:GO:0007204 Uniprot:Q9GZZ6
Length = 450
Score = 360 (131.8 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 66/168 (39%), Positives = 105/168 (62%)
Query: 57 RRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
R L++F +VEW +L +PA R Y CC EPY D+TF + +RR+ Y N++
Sbjct: 185 RPRGAAASLADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLL 244
Query: 117 IPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
+PC+ IS L L F+LP+DSGEKV+L +++L++L VF LL+ E +PP V PL+GKY +
Sbjct: 245 LPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLLLAESMPPAESV-PLIGKYYM 303
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR 224
M +V+ S +T++++N+H+ P + W + + + L R L +R
Sbjct: 304 ATMTMVTFSTALTILIMNLHYCGPSVRPVPAWARALLLGHLARGLCVR 351
Score = 73 (30.8 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 29/91 (31%), Positives = 38/91 (41%)
Query: 265 LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVK--ED 322
LS SPQ PPA P C C + H +T S + ED
Sbjct: 365 LSPSPQSPEGGAGPPA------GPCHEPRCLCRQEALLHHVATIANTFRSHRAAQRCHED 418
Query: 323 WKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
WK +A V+DR FL IF L + +++QA
Sbjct: 419 WKRLARVMDRFFLAIFFSMALVMSLLVLVQA 449
>UNIPROTKB|F1SUZ0 [details] [associations]
symbol:CHRNA10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0042472 GO:GO:0004889
OMA:DGAVRWD GO:GO:0050910 GO:GO:0007204
GeneTree:ENSGT00630000089708 EMBL:CU928773
Ensembl:ENSSSCT00000016147 Uniprot:F1SUZ0
Length = 454
Score = 362 (132.5 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 67/168 (39%), Positives = 105/168 (62%)
Query: 57 RRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
R L++F +VEW +L +PA R Y CC EPY D+TF + +RR+ Y N++
Sbjct: 189 RPRGAAASLADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLL 248
Query: 117 IPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
+PC+ IS L L F+LP+DSGEKV+L +++L++L VF LL+ E +PP V PL+GKY +
Sbjct: 249 LPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLLLAESMPPAESV-PLIGKYYM 307
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR 224
M LV+ S +T++++N+H+ P + W + + + L R L +R
Sbjct: 308 ATMTLVTFSTALTILIMNLHYCGPSARPVPAWARALLLGHLARGLCVR 355
Score = 69 (29.3 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 27/91 (29%), Positives = 37/91 (40%)
Query: 265 LSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR-FIAEHTRMQDDSTKESTLIMVK-ED 322
LS SPQ P A CP C C + + H + + ED
Sbjct: 369 LSPSPQPPDPGAGPLA---GPCP---EPRCLCRQEALLRHVATIASAVHSHRAAQRRHED 422
Query: 323 WKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
WK +A V+DR FL IF L + +++QA
Sbjct: 423 WKRLARVMDRFFLGIFFSMALVMSLLVLVQA 453
>UNIPROTKB|Q60S81 [details] [associations]
symbol:eat-2 "Neuronal acetylcholine receptor subunit
eat-2" species:6238 "Caenorhabditis briggsae" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0008340 "determination of adult lifespan"
evidence=ISS] [GO:0043050 "pharyngeal pumping" evidence=ISS]
[GO:0045203 "integral to cell outer membrane" evidence=ISS]
[GO:0048609 "multicellular organismal reproductive process"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0008340 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0007274
GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892 EMBL:HE600928
RefSeq:XP_002631787.1 ProteinModelPortal:Q60S81 GeneID:8573786
WormBase:CBG21000 eggNOG:NOG267445 GO:GO:0045203 GO:GO:0048609
GO:GO:0043050 Uniprot:Q60S81
Length = 481
Score = 346 (126.9 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 61/164 (37%), Positives = 110/164 (67%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
+DL + + E+D++ PA R K T DE Y+++ F++ ++R+T++Y +N IIP + I
Sbjct: 189 MDLQYYVPNGEFDLISTPAFR--KSTTFLDETYVELYFHMHLKRRTMYYGLNWIIPSILI 246
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S +L F +P + GEKVTL I+ +S+ VF +V E+ PPTS +P++ + FA++++
Sbjct: 247 SLSNILGFTMPVECGEKVTLQITNFLSIMVFLAMVSEVAPPTSESIPIIAAFFSFAIVIL 306
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+SICV+++ +N+ +R P+ H+M W + +F+++LP L+M RP
Sbjct: 307 GVSICVSLITVNIFYRHPKMHRMGDWTRYIFLEWLPWFLLMSRP 350
Score = 85 (35.0 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 305 RMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYD-DRV 361
++ DD +E ++ +W+++A+V+DR L++FT + G T I P+L+ D++
Sbjct: 420 KLDDDEEEEEEIL----NWRFMAMVIDRASLFLFTGLIFGTTFVIFAACPNLFSADQI 473
>WB|WBGene00043066 [details] [associations]
symbol:acr-25 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 EMBL:FO081731 RefSeq:NP_001023570.2
UniGene:Cel.37052 ProteinModelPortal:Q65XS8 SMR:Q65XS8
EnsemblMetazoa:Y73B6BL.42 GeneID:3565563 KEGG:cel:CELE_Y73B6BL.42
UCSC:Y73B6BL.42 CTD:3565563 WormBase:Y73B6BL.42 eggNOG:NOG324576
InParanoid:Q65XS8 OMA:RICMVIF NextBio:956957 Uniprot:Q65XS8
Length = 544
Score = 346 (126.9 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 65/169 (38%), Positives = 107/169 (63%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 121
G D+S + + EW + RN ++Y CC EPY D+ F +RR+ L+Y N+I+PC+
Sbjct: 186 GFDISNYMQNGEWTLEGTTVKRNIQYYQCCPEPYYDLVFTFVIRRRALYYAFNLILPCIL 245
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMIL 181
I+ LT++ F P D+GEK++L I+I++S+ +F V E+ PPTS VP L + FA+ L
Sbjct: 246 ITMLTLVGFTFPPDAGEKMSLQITIMLSICIFQNYVAELSPPTSEAVPFLSAF--FAVCL 303
Query: 182 VSISICVTV--VVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLY 228
+ + CVT + LN H R+ ++H+M + + ++++P +L+MRRP Y
Sbjct: 304 FTCACCVTATTLALNFHHRTGKSHQMNNTFRLLMLEWIPWLLMMRRPGY 352
Score = 90 (36.7 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 300 IAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
I +H R ++ S K +++DWK+ ALV+DR+ + IFT + G T + P++
Sbjct: 490 INKHIREREKSKK------IEDDWKFSALVVDRICMVIFTSFLFGSTVALFASVPNI 540
>UNIPROTKB|F1MF20 [details] [associations]
symbol:CHRNA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0042472 GO:GO:0004889
OMA:DGAVRWD GO:GO:0050910 GO:GO:0007204
GeneTree:ENSGT00630000089708 EMBL:DAAA02040992 IPI:IPI00706078
Ensembl:ENSBTAT00000061577 Uniprot:F1MF20
Length = 459
Score = 356 (130.4 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 65/168 (38%), Positives = 105/168 (62%)
Query: 57 RRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
R L++F +VEW +L +PA R Y CC EPY D+TF + +RR+ Y N++
Sbjct: 194 RPRGAAASLADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLL 253
Query: 117 IPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
+PC+ IS L L F+LP+DSGEKV+L +++L++L VF L++ E +PP V PL+GKY +
Sbjct: 254 LPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLILAESMPPAESV-PLIGKYYM 312
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR 224
M +V+ S +T++++N+H+ P + W + + + L R L +R
Sbjct: 313 ATMTMVTFSTALTILIMNLHYCGPSARPVPAWARALLLGRLARGLCVR 360
Score = 67 (28.6 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 266 SSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR-FIAEHTRMQDDSTKESTLIMVK-EDW 323
S SPQ + PPA P C C + + H ++ + EDW
Sbjct: 375 SPSPQPPDRGTGPPA------GPCHEPRCLCHQEALLRHVATIANAFHSHRAAQRRHEDW 428
Query: 324 KYVALVLDRLFLWIF 338
K +A V+DR FL IF
Sbjct: 429 KRLARVMDRFFLGIF 443
>WB|WBGene00000049 [details] [associations]
symbol:acr-10 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0040011 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:FO080560
ProteinModelPortal:Q21645 SMR:Q21645 PaxDb:Q21645
EnsemblMetazoa:R02E12.8 KEGG:cel:CELE_R02E12.8 UCSC:R02E12.8
CTD:191598 WormBase:R02E12.8 eggNOG:NOG300001 InParanoid:Q21645
OMA:NSASEDF NextBio:949620 Uniprot:Q21645
Length = 557
Score = 344 (126.2 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 68/167 (40%), Positives = 106/167 (63%)
Query: 61 VGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCM 120
+ +DLS + S EW + + PAV++ K+ +CC EPY +TF + +RR+TLFY NII+P +
Sbjct: 194 LSIDLSTYTPSGEWHLTKAPAVKDVKYNSCCKEPYSTVTFYMFLRRRTLFYLFNIILPSL 253
Query: 121 GISFLTVLTFYLPS-DSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAM 179
IS +T++ F LP+ D EK+ +IL+S+ F +V E+ PPTS VPLLG +
Sbjct: 254 LISIMTLMGFCLPAHDMSEKIGYQTTILLSICFFVTIVSEMTPPTSESVPLLGMFFSSLT 313
Query: 180 ILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++ S+S T+ VLN +R Q M P +VF+ ++P +L+M+RP
Sbjct: 314 LISSVSTAFTITVLNFRYRQVQNIHMHPIFYKVFLIWIPWLLLMKRP 360
Score = 87 (35.7 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 312 KESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAP 354
K+ + +EDWK+ A+ LDRL L + TL ++ G+IL P
Sbjct: 511 KQRKYLFKQEDWKFAAMALDRLCLLLITLLIVMCLFGMILSTP 553
>WB|WBGene00002975 [details] [associations]
symbol:lev-8 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HSSP:P02711
GO:GO:0004889 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
EMBL:Z78417 PIR:T19748 RefSeq:NP_509932.2 ProteinModelPortal:Q93329
SMR:Q93329 MINT:MINT-3383701 STRING:Q93329 EnsemblMetazoa:C35C5.5
GeneID:191600 KEGG:cel:CELE_C35C5.5 CTD:191600 WormBase:C35C5.5
eggNOG:NOG300335 InParanoid:Q93329 OMA:LAKIDHH NextBio:949628
Uniprot:Q93329
Length = 531
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 100/311 (32%), Positives = 175/311 (56%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFYT-CCDEPY-LDITFNITMRRKTLFYTVNIIIPC 119
G+ LS ++ S EWD+L + R + Y CC + Y +DI + I +RRK +F+TV + IPC
Sbjct: 211 GLGLSFYHESAEWDLLSATSSRYAQIYPGCCGQQYYIDIKYRIIIRRKAIFFTVTLTIPC 270
Query: 120 MGISFLTVLTFY-LPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
M I+ +T F LP++ K+T SIS+L++ VF+L+++++IPPTSL + L+G YL+F
Sbjct: 271 MLIANVTPFVFLILPNE--HKMTYSISVLVAFSVFYLVLIDLIPPTSLSLSLIGIYLLFT 328
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADG 238
+++VS+SI ++VV +N++ + + M+ W + +F+Q LP++L ++ H G
Sbjct: 329 LLMVSVSIILSVVTINMYRKQAFSSGMSHWQRWLFVQRLPKLLRLKTL------EHTL-G 381
Query: 239 PLIGGSGGSCKIHGHVSLSNILTEAILS---SSPQDDSKHLRPPAFSHAQCPPVMHRSCF 295
P GS + G VS++ +T+ L+ +SP + LR S Q + + C
Sbjct: 382 P-DEGSETTTPRTGSVSVTASVTQRTLNPNNNSPVFPPQRLR--LLSLVQMDEALKQRCA 438
Query: 296 C-----VRFIAEHTRMQDDSTKESTLI-MVKEDWKYVALVLDRLFLWIFTLAVLGGTAGI 349
R IA H ++ + + E+W+ ++LV+DR+FL +F +
Sbjct: 439 ADNLDLFRKIAGHLKIISAHFHNQQMEGKITEEWQLMSLVIDRIFLILFLAVSMAANIMF 498
Query: 350 ILQAPSLYDDR 360
+ +P+L+DDR
Sbjct: 499 VYNSPTLFDDR 509
>WB|WBGene00000058 [details] [associations]
symbol:acr-19 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312 EMBL:Z93778
RefSeq:NP_001129756.1 UniGene:Cel.8248 ProteinModelPortal:B3WFZ2
SMR:B3WFZ2 EnsemblMetazoa:C31H5.3b GeneID:191605
KEGG:cel:CELE_C31H5.3 CTD:191605 WormBase:C31H5.3b
InParanoid:B3WFZ2 OMA:RTSASIM NextBio:949650 ArrayExpress:B3WFZ2
Uniprot:B3WFZ2
Length = 560
Score = 362 (132.5 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 68/155 (43%), Positives = 104/155 (67%)
Query: 73 EWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYL 132
EW++L + + R+ FY CC EPY D+TF +++RR+TL+Y N+++PCM IS L +L+F L
Sbjct: 200 EWELLGLTSQRSIFFYECCPEPYYDVTFTVSIRRRTLYYGFNLLLPCMLISSLALLSFTL 259
Query: 133 PSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 192
P+D GEK+ L ++I +SL VF ++V E +P TS +PL+ Y M V S+ TV+
Sbjct: 260 PADCGEKLNLGVTIFMSLCVFMIMVAEAMPQTSDALPLIQIYFSCIMFQVGASVVATVIA 319
Query: 193 LNVHFRSPQTHK-MAPWVKRVFIQFLPRILVMRRP 226
LN H RSP+ +K M ++K + + +LP +L M RP
Sbjct: 320 LNFHHRSPEQYKPMNKFLKTLLLGWLPTLLGMERP 354
Score = 61 (26.5 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 312 KESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLY 357
KE + ++ DW + + V+DR+ F+ + TA I AP L+
Sbjct: 514 KEEAMHALQADWMFASRVVDRVCFLAFSAFLFMCTAIISYNAPHLF 559
>ZFIN|ZDB-GENE-040808-32 [details] [associations]
symbol:chrne "cholinergic receptor, nicotinic,
epsilon" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-040808-32 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007271 GO:GO:0004889 GO:GO:0005892
EMBL:JN242071 UniGene:Dr.85037 Uniprot:G1FMQ0
Length = 517
Score = 348 (127.6 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 72/168 (42%), Positives = 111/168 (66%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPA--VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
E V +D F + EW I PA + N++ Y+ D Y ++ +NI ++RK LFY +NII
Sbjct: 195 EWVDIDPEAFTENGEWAIKHRPARKLTNQR-YSPDDLEYQEVYYNIIIQRKPLFYVINII 253
Query: 117 IPCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 175
+PC IS L VL ++LP+ +G +K+T+SIS+L++ VF +L+ + IP TSL VPL+GKYL
Sbjct: 254 LPCSLISSLVVLAYFLPAKAGGQKLTVSISVLLAQTVFLILISQKIPETSLSVPLIGKYL 313
Query: 176 IFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM 223
IF M + ++ + ++VLN RSP TH M+ +K +F++ +PR L M
Sbjct: 314 IFVMSMTTLIVTNCIIVLNYSLRSPSTHNMSQSIKHIFLEVVPRYLGM 361
Score = 63 (27.2 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 19/70 (27%), Positives = 29/70 (41%)
Query: 282 SHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLA 341
S A+ P + FIAE T+ Q+D+ E E W + ++D++ W
Sbjct: 432 SLAKTAPEIKECVDACNFIAESTKQQNDTGSEM------ESWVLIGKMIDKVCFWAAISL 485
Query: 342 VLGGTAGIIL 351
GT I L
Sbjct: 486 FSIGTIAIFL 495
>WB|WBGene00000046 [details] [associations]
symbol:acr-7 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:AF187012 EMBL:Z36753
PIR:T24724 RefSeq:NP_495647.1 UniGene:Cel.19448
ProteinModelPortal:P45963 SMR:P45963 EnsemblMetazoa:T09A5.3
GeneID:174262 KEGG:cel:CELE_T09A5.3 UCSC:T09A5.3 CTD:174262
WormBase:T09A5.3 eggNOG:NOG281192 InParanoid:P45963 OMA:VINWIPP
NextBio:883279 Uniprot:P45963
Length = 538
Score = 350 (128.3 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 63/164 (38%), Positives = 105/164 (64%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DLS + + EW +L PA R EKFY CC EPY + F + +RR+T +Y N+++P + +S
Sbjct: 203 DLSTYITNGEWHLLSAPARREEKFYKCCKEPYPTVKFYLHLRRRTFYYVFNVVLPTLLVS 262
Query: 124 FLTVLTFYLPS-DSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
F+++L F LP+ D EK+ L +IL+S+ F ++ E+ P TS VPLLG + +V
Sbjct: 263 FMSLLAFCLPATDLSEKIGLQTTILLSVCFFLTILSEMTPTTSEAVPLLGVFFSALTFIV 322
Query: 183 SISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++S T++VLN+ +R H ++P + +F++ LP +++M+RP
Sbjct: 323 AMSTTFTILVLNIRYRQITNHYLSPMFRSIFLECLPWLMMMKRP 366
Score = 58 (25.5 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 319 VKEDWKYVALVLDRLFLWIFTLAVL 343
++++WK+ A +DR L IFT+ +
Sbjct: 498 IQDEWKFAAQAVDRFCLIIFTIVFI 522
>UNIPROTKB|P02713 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1146 KO:K04818
EMBL:K02904 EMBL:S47175 IPI:IPI00577154 PIR:A03172
RefSeq:NP_001026739.1 UniGene:Gga.32083 ProteinModelPortal:P02713
SMR:P02713 PRIDE:P02713 GeneID:429151 KEGG:gga:429151
InParanoid:P02713 OrthoDB:EOG4R7V9N NextBio:20829964 Uniprot:P02713
Length = 514
Score = 330 (121.2 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 68/171 (39%), Positives = 106/171 (61%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPA--VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
E + +D F + EW I PA + N +T D Y + F + ++RK LFY +NII
Sbjct: 191 EWIFIDPEAFTENGEWAIKHRPARKIINSGRFTPDDIQYQQVIFYLIIQRKPLFYIINII 250
Query: 117 IPCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 175
+PC+ IS + VL ++LP+ +G +K T+SI++L++ VF L+ + +P TS VPL+GKYL
Sbjct: 251 VPCVLISSMAVLVYFLPAKAGGQKCTVSINVLLAQTVFLFLIAQKVPETSQAVPLIGKYL 310
Query: 176 IFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
F M++ + + V+VLNV R+P TH M+ V++V++ LPR L M P
Sbjct: 311 TFLMVVTVVIVVNAVIVLNVSLRTPNTHSMSQRVRQVWLHLLPRYLGMHMP 361
Score = 74 (31.1 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 292 RSCF-CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGII 350
R+C IA TR Q+D + E+ E+W V V+DR+ +I + GT GI
Sbjct: 438 RACVEACNHIANATREQNDFSSEN------EEWILVGRVIDRVCFFIMASLFVCGTIGIF 491
Query: 351 LQA 353
L A
Sbjct: 492 LMA 494
>UNIPROTKB|F1NJ22 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391
GO:GO:0004889 GO:GO:0005892 GeneTree:ENSGT00620000087691
OMA:VFYLLIQ IPI:IPI00577154 EMBL:AADN02020674 EMBL:AADN02020675
ProteinModelPortal:F1NJ22 Ensembl:ENSGALT00000012833 Uniprot:F1NJ22
Length = 516
Score = 330 (121.2 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 68/171 (39%), Positives = 106/171 (61%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPA--VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNII 116
E + +D F + EW I PA + N +T D Y + F + ++RK LFY +NII
Sbjct: 193 EWIFIDPEAFTENGEWAIKHRPARKIINSGRFTPDDIQYQQVIFYLIIQRKPLFYIINII 252
Query: 117 IPCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 175
+PC+ IS + VL ++LP+ +G +K T+SI++L++ VF L+ + +P TS VPL+GKYL
Sbjct: 253 VPCVLISSMAVLVYFLPAKAGGQKCTVSINVLLAQTVFLFLIAQKVPETSQAVPLIGKYL 312
Query: 176 IFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
F M++ + + V+VLNV R+P TH M+ V++V++ LPR L M P
Sbjct: 313 TFLMVVTVVIVVNAVIVLNVSLRTPNTHSMSQRVRQVWLHLLPRYLGMHMP 363
Score = 74 (31.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 292 RSCF-CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGII 350
R+C IA TR Q+D + E+ E+W V V+DR+ +I + GT GI
Sbjct: 440 RACVEACNHIANATREQNDFSSEN------EEWILVGRVIDRVCFFIMASLFVCGTIGIF 493
Query: 351 LQA 353
L A
Sbjct: 494 LMA 496
>FB|FBgn0032151 [details] [associations]
symbol:nAcRalpha-30D "nicotinic Acetylcholine Receptor alpha
30D" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;IDA;NAS] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISS;IDA;NAS] [GO:0006811 "ion transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0017085 "response to insecticide" evidence=IMP;NAS] [GO:0016021
"integral to membrane" evidence=IDA] [GO:0046716 "muscle cell
homeostasis" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 EMBL:AE014134 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 GO:GO:0005892 OMA:KESCQGP
GO:GO:0046716 GO:GO:0017085 UniGene:Dm.4086 GeneID:34304
KEGG:dme:Dmel_CG4128 CTD:34304 FlyBase:FBgn0032151
ChiTaRS:nAcRalpha-30D GenomeRNAi:34304 NextBio:787836
RefSeq:NP_995675.1 ProteinModelPortal:Q7KTF8 SMR:Q7KTF8
STRING:Q7KTF8 PRIDE:Q7KTF8 EnsemblMetazoa:FBtr0079912
UCSC:CG4128-RE InParanoid:Q7KTF8 PhylomeDB:Q7KTF8
ArrayExpress:Q7KTF8 Bgee:Q7KTF8 Uniprot:Q7KTF8
Length = 523
Score = 312 (114.9 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 63/130 (48%), Positives = 89/130 (68%)
Query: 62 GVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 121
G DLS+F + EW +L +P +N Y CC EPY+DITF I +RR+TL+Y N+I+PC+
Sbjct: 191 GGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVL 250
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMIL 181
IS + +L F LP DSGEK+TL ++IL+SL VF LV E +P TS VPL+G IL
Sbjct: 251 ISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIG-----VTIL 305
Query: 182 VSISICVTVV 191
+S+++ + +V
Sbjct: 306 LSLTVFLNLV 315
Score = 224 (83.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
FL ++ +P+ S + ++IL+SL VF LV E +P S +PLLG Y M +V+
Sbjct: 282 FLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVA 341
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
S+ +TVVVLN H R+ H+M PW+K VF+Q+LP IL M RP
Sbjct: 342 SSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP 384
Score = 94 (38.1 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
++FI R DD E+ LI DWK+ A+V+DR L +FTL + T ++L AP +
Sbjct: 467 LQFITARMRKADD---EAELI---GDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSAPHI 520
>UNIPROTKB|F1RFW1 [details] [associations]
symbol:CHRNE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0004889
GeneTree:ENSGT00620000087691 KO:K04817 OMA:AIYRSTC EMBL:FP015831
RefSeq:XP_003131968.1 UniGene:Ssc.78859 Ensembl:ENSSSCT00000019489
GeneID:100515236 KEGG:ssc:100515236 Uniprot:F1RFW1
Length = 495
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 98/306 (32%), Positives = 158/306 (51%)
Query: 60 RVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPY-LDITFNITMRRKTLFYTVNIIIP 118
++ +D + + EW I P V + D+P D+T+ + +RRK LFY +NII+P
Sbjct: 193 KLEIDTEAYTENGEWAIDFCPGVIRRHDGSSPDDPGDSDVTYTLIIRRKPLFYVINIIVP 252
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VPLLG+YLIF
Sbjct: 253 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIF 312
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ ++ + V+VLNV R+P TH ++P ++ V ++ LP +L P +P+ A
Sbjct: 313 VMVVATLIVMNCVIVLNVSLRTPTTHTVSPRLRHVLLELLPPLLGFGEPP-SPEAPRAAS 371
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF-C 296
P S G + L +E + S P + R C
Sbjct: 372 PPRRASSLGLLLRAEELILKKPRSELVFEGQRHRHGTWTAALCQSLGAAAPEI-RCCVDA 430
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
V F+AE TR Q+ + +E + DW + LD + W + L G++ I L A
Sbjct: 431 VNFVAESTREQEATGEEVS------DWVRMGKALDNICFWAALVLFLVGSSLIFLGA--- 481
Query: 357 YDDRVP 362
Y ++VP
Sbjct: 482 YFNQVP 487
>ZFIN|ZDB-GENE-030131-3805 [details] [associations]
symbol:chrng "cholinergic receptor, nicotinic,
gamma" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-030131-3805 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007271 GO:GO:0004889 GO:GO:0005892 CTD:1146
KO:K04818 EMBL:JN242070 RefSeq:NP_001240740.1 UniGene:Dr.162252
GeneID:325080 KEGG:dre:325080 Uniprot:G1FMP9
Length = 540
Score = 318 (117.0 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 69/177 (38%), Positives = 110/177 (62%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPA--VRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNI 115
E + +D F + EW I PA V N+++ DE + +I F + ++RK LFY +NI
Sbjct: 196 EWIEIDPEAFTENGEWMIKHRPAKKVINKRYRP--DELEHQEIIFFLIIQRKPLFYVINI 253
Query: 116 IIPCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKY 174
I+PC+ S L +L ++LP+ +G +K T++I IL+ VF L+ + +P TS VPL+GKY
Sbjct: 254 IVPCVLFSSLGLLVYFLPAKAGGQKCTMTICILLGQTVFLFLIAKKVPETSQAVPLIGKY 313
Query: 175 LIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPD 231
L+F M + +I++ VVVLNV R+P TH M+ +++V + LPR+L M + P+
Sbjct: 314 LMFVMSVTTITVMNCVVVLNVSLRTPNTHPMSNTIRKVLLNILPRVLRMTMQRWTPE 370
Score = 82 (33.9 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 284 AQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
A P V C + IAE T+ Q+D ++ E+W VA V+DR+ ++ L +
Sbjct: 450 AASPEVQQCVSSC-KHIAESTKHQNDFQSKN------EEWFLVARVIDRMCFFVMALLFI 502
Query: 344 GGTAGIIL-----QAPS 355
GT GI L QAPS
Sbjct: 503 LGTIGIFLTGHFNQAPS 519
>UNIPROTKB|Q04844 [details] [associations]
symbol:CHRNE "Acetylcholine receptor subunit epsilon"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006936 "muscle contraction" evidence=TAS]
[GO:0015464 "acetylcholine receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0005892
"acetylcholine-gated channel complex" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007271 "synaptic transmission, cholinergic"
evidence=TAS] [GO:0008324 "cation transmembrane transporter
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0006812
"cation transport" evidence=TAS] Reactome:REACT_13685
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 EMBL:CH471108
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0007271 GO:GO:0042391
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
MIM:254200 MIM:601462 MIM:608930 Orphanet:98913
HOGENOM:HOG000006757 GO:GO:0006936 MIM:608931 eggNOG:NOG291810
CTD:1145 KO:K04817 OMA:AIYRSTC EMBL:X66403 EMBL:AF105999
IPI:IPI00029753 PIR:S34775 RefSeq:NP_000071.1 UniGene:Hs.654535
PDB:2DF9 PDBsum:2DF9 ProteinModelPortal:Q04844 SMR:Q04844
STRING:Q04844 DMDM:1168301 PRIDE:Q04844 Ensembl:ENST00000293780
GeneID:1145 KEGG:hsa:1145 UCSC:uc002fzk.1 GeneCards:GC17M004801
H-InvDB:HIX0027273 HGNC:HGNC:1966 MIM:100725 neXtProt:NX_Q04844
PharmGKB:PA26498 InParanoid:Q04844 OrthoDB:EOG4DZ1V6
PhylomeDB:Q04844 BindingDB:Q04844 ChEMBL:CHEMBL2484 GenomeRNAi:1145
NextBio:4764 ArrayExpress:Q04844 Bgee:Q04844 CleanEx:HS_CHRNE
Genevestigator:Q04844 GermOnline:ENSG00000108556 Uniprot:Q04844
Length = 493
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 104/315 (33%), Positives = 162/315 (51%)
Query: 60 RVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIIIP 118
++ +D + + EW I P V D P D+ +++ +RRK LFY +NII+P
Sbjct: 191 KIDIDTEAYTENGEWAIDFCPGVIRRHHGGATDGPGETDVIYSLIIRRKPLFYVINIIVP 250
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VPLLG++LIF
Sbjct: 251 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRFLIF 310
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ ++ + V+VLNV R+P TH M+P ++ V ++ LPR+L P P+ A
Sbjct: 311 VMVVATLIVMNCVIVLNVSQRTPTTHAMSPRLRHVLLELLPRLLGSPPP---PEAPRAAS 367
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSH---AQCPPVMHRSC 294
P S G + L +E + Q + AF A P V R C
Sbjct: 368 PPRRASSVGLLLRAEELILKKPRSELVFEG--QRHRQGTWTAAFCQSLGAAAPEV--RCC 423
Query: 295 F-CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQA 353
V F+AE TR Q+ + +E + DW + LD + W + G++ I L A
Sbjct: 424 VDAVNFVAESTRDQEATGEEVS------DWVRMGNALDNICFWAALVLFSVGSSLIFLGA 477
Query: 354 PSLYDDRVPIDSKFA 368
Y +RVP D +A
Sbjct: 478 ---YFNRVP-DLPYA 488
>UNIPROTKB|F1Q3W1 [details] [associations]
symbol:CHRNE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00620000087691
OMA:AIYRSTC EMBL:AAEX03003590 Ensembl:ENSCAFT00000025084
Uniprot:F1Q3W1
Length = 493
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 100/309 (32%), Positives = 156/309 (50%)
Query: 60 RVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
++ +D + + EW I P +R + D +DI + + +RRK LFY +NII+P
Sbjct: 192 KIDIDTEAYTENGEWAIDFCPGLIRRPNGASAGDPGVVDIIYTLIIRRKPLFYVINIIVP 251
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VP+LG+YLIF
Sbjct: 252 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPMLGRYLIF 311
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ +I + V+VLNV R+P TH M+P ++ V ++ LP +L P P+ A
Sbjct: 312 VMVVATIIVMNCVIVLNVSLRTPTTHAMSPRLRHVLLEQLPSLLGSSAP---PEAPRAAP 368
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSH--AQCPPVMHRSCF 295
P S G + L +E + A P + R C
Sbjct: 369 PPRRASSVGLLLRAEELILKKPRSELVFEGQRHRHGAWTAAALCQSLGAAAPEI--RCCV 426
Query: 296 -CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLG-GTAGIILQA 353
V F+AE TR Q+ S +E + DW + LD L W L + G G++ I L
Sbjct: 427 EAVNFVAESTRSQEASVEEVS------DWVRMGKALDHLCFWA-ALVLFGVGSSVIFLGG 479
Query: 354 PSLYDDRVP 362
Y ++VP
Sbjct: 480 ---YFNQVP 485
>WB|WBGene00000053 [details] [associations]
symbol:acr-14 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 HSSP:P02711 GO:GO:0040011 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:Z66500
PIR:T24504 RefSeq:NP_495716.1 UniGene:Cel.16093
ProteinModelPortal:Q22224 SMR:Q22224 EnsemblMetazoa:T05C12.2
GeneID:191601 KEGG:cel:CELE_T05C12.2 UCSC:T05C12.2 CTD:191601
WormBase:T05C12.2 eggNOG:NOG304378 InParanoid:Q22224 OMA:MSILAYM
NextBio:949632 Uniprot:Q22224
Length = 500
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 98/295 (33%), Positives = 164/295 (55%)
Query: 63 VDLSEFYMSVEWDILEVPAVRN-EKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMG 121
+DL + + EWD+ P R +KF T DE Y ++ F I +RR+TL Y +N+IIP +
Sbjct: 215 IDLQVYLQNGEWDLEGTPGKRVVQKFGT--DE-YHELYFYIHIRRRTLAYGINLIIPSLV 271
Query: 122 ISFLTVLTFYLPSDSGEKVTLSISILISLHVFFL-LVVEIIPPTSLVVPLLGKYLIFAMI 180
IS +T+L F LP D+ EK+TL ++L+S+ +FFL +V PP S VP+L + ++
Sbjct: 272 ISMMTILGFTLPPDACEKITLETTVLLSV-IFFLQMVSSTSPPQSQSVPILAAFFSCCLM 330
Query: 181 LVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPL 240
LV+ S TV+ L++H R P+TH+M+P ++++FI +LP IL M +P D +
Sbjct: 331 LVACSCVFTVLTLSLHHRKPETHEMSPTMRKIFIDWLPYILCMCKP----DHPKTPKPKV 386
Query: 241 IGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVM-HRSCFCVRF 299
+G S IH +S +L +S + D F + + P V+ + S C
Sbjct: 387 LGKS--IAPIH-RLSTIPMLNLPRVSQTTFPDKN-----VFVYHEVPAVIKNTSRICAEL 438
Query: 300 -IAEHT--RMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
I E +M D +++ M++ +W++ A+ +DRL L++F+ + T G+I+
Sbjct: 439 LIIERDIEKMLDKIEEDTKEDMLRSEWRFAAMAVDRLCLYVFSAFITMITCGLIV 493
>RGD|2353 [details] [associations]
symbol:Chrne "cholinergic receptor, nicotinic, epsilon (muscle)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2353
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006757
eggNOG:NOG291810 CTD:1145 KO:K04817 OrthoDB:EOG4DZ1V6 EMBL:X74836
EMBL:X13252 EMBL:Z23062 EMBL:X06365 IPI:IPI00188510 PIR:S01959
RefSeq:NP_058890.1 UniGene:Rn.10301 ProteinModelPortal:P09660
SMR:P09660 STRING:P09660 PRIDE:P09660 GeneID:29422 KEGG:rno:29422
UCSC:RGD:2353 InParanoid:P09660 ChEMBL:CHEMBL4961 NextBio:609114
Genevestigator:P09660 GermOnline:ENSRNOG00000003777 Uniprot:P09660
Length = 494
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 96/307 (31%), Positives = 155/307 (50%)
Query: 60 RVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
++ +D + F + EW I P +R+ + + D D+ + + +RRK LFY +NII+P
Sbjct: 191 KIDIDTAAFTENGEWAIDYCPGMIRHYEGGSTEDPGETDVIYTLIIRRKPLFYVINIIVP 250
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VPLLG+YLIF
Sbjct: 251 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIF 310
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ ++ + V+VLNV R+P TH +P ++++ ++ LPR+L + P P+ A
Sbjct: 311 VMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLLGLSPP---PEDPGAAS 367
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSH--AQCPPVMHRSCF 295
S G + L +E + + A P V R C
Sbjct: 368 PARRASSVGILLRAEELILKKPRSELVFEGQRHRHGTWTAAALCQNLGAAAPEV--RCCV 425
Query: 296 -CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI-FTLAVLGGT----AGI 349
V F+AE TR Q+ + +E + DW + LD + W L +G T G
Sbjct: 426 DAVNFVAESTRDQEATGEELS------DWVRMGKALDNVCFWAALVLFSVGSTLIFLGGY 479
Query: 350 ILQAPSL 356
Q P L
Sbjct: 480 FNQVPDL 486
>UNIPROTKB|P09660 [details] [associations]
symbol:Chrne "Acetylcholine receptor subunit epsilon"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2353
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1145 KO:K04817
OrthoDB:EOG4DZ1V6 EMBL:X74836 EMBL:X13252 EMBL:Z23062 EMBL:X06365
IPI:IPI00188510 PIR:S01959 RefSeq:NP_058890.1 UniGene:Rn.10301
ProteinModelPortal:P09660 SMR:P09660 STRING:P09660 PRIDE:P09660
GeneID:29422 KEGG:rno:29422 UCSC:RGD:2353 InParanoid:P09660
ChEMBL:CHEMBL4961 NextBio:609114 Genevestigator:P09660
GermOnline:ENSRNOG00000003777 Uniprot:P09660
Length = 494
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 96/307 (31%), Positives = 155/307 (50%)
Query: 60 RVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
++ +D + F + EW I P +R+ + + D D+ + + +RRK LFY +NII+P
Sbjct: 191 KIDIDTAAFTENGEWAIDYCPGMIRHYEGGSTEDPGETDVIYTLIIRRKPLFYVINIIVP 250
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VPLLG+YLIF
Sbjct: 251 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIF 310
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ ++ + V+VLNV R+P TH +P ++++ ++ LPR+L + P P+ A
Sbjct: 311 VMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLLGLSPP---PEDPGAAS 367
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSH--AQCPPVMHRSCF 295
S G + L +E + + A P V R C
Sbjct: 368 PARRASSVGILLRAEELILKKPRSELVFEGQRHRHGTWTAAALCQNLGAAAPEV--RCCV 425
Query: 296 -CVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI-FTLAVLGGT----AGI 349
V F+AE TR Q+ + +E + DW + LD + W L +G T G
Sbjct: 426 DAVNFVAESTRDQEATGEELS------DWVRMGKALDNVCFWAALVLFSVGSTLIFLGGY 479
Query: 350 ILQAPSL 356
Q P L
Sbjct: 480 FNQVPDL 486
>UNIPROTKB|P02715 [details] [associations]
symbol:CHRNE "Acetylcholine receptor subunit epsilon"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006757 GeneTree:ENSGT00620000087691
eggNOG:NOG291810 EMBL:X02597 EMBL:AF457659 EMBL:AF457656
EMBL:AF457657 EMBL:AF457658 IPI:IPI00717076 PIR:A03174
RefSeq:NP_776697.1 UniGene:Bt.4231 ProteinModelPortal:P02715
SMR:P02715 PRIDE:P02715 Ensembl:ENSBTAT00000045415 GeneID:281688
KEGG:bta:281688 CTD:1145 KO:K04817 OMA:AIYRSTC NextBio:20805615
ArrayExpress:P02715 Uniprot:P02715
Length = 491
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 95/306 (31%), Positives = 153/306 (50%)
Query: 60 RVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIIIP 118
++ +D + + EW I P V P D+ +++ +RRK LFY +NII+P
Sbjct: 191 KIDIDTEAYTENGEWAIDFCPGVIRRHDGDSAGGPGETDVIYSLIIRRKPLFYVINIIVP 250
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + P TSL VPLLG+YLIF
Sbjct: 251 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKTPETSLSVPLLGRYLIF 310
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ ++ + V+VLNV R+P TH M+P ++ V ++ LP++L P P+ A
Sbjct: 311 VMVVATLIVMNCVIVLNVSLRTPTTHAMSPRLRYVLLELLPQLLGSGAP---PEIPRAAS 367
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF-C 296
P S G + L +E + + P + R C
Sbjct: 368 PPRRASSLGLLLRAEELILKKPRSELVFEQQRHRHGTWTATLCQNLGAAAPEI-RCCVDA 426
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
V F+A TR Q+ + +E + DW + LD + W + L G++ I L A
Sbjct: 427 VNFVASSTRDQEATGEEVS------DWVRMGKALDSICFWAALVLFLVGSSLIFLGA--- 477
Query: 357 YDDRVP 362
Y +RVP
Sbjct: 478 YFNRVP 483
>UNIPROTKB|F1SMT2 [details] [associations]
symbol:CHRNG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087691 KO:K04818 OMA:VFYLLIQ EMBL:CU855838
RefSeq:XP_003133779.1 UniGene:Ssc.60118 Ensembl:ENSSSCT00000017737
GeneID:100522221 KEGG:ssc:100522221 Uniprot:F1SMT2
Length = 519
Score = 307 (113.1 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 67/172 (38%), Positives = 107/172 (62%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA + ++ + + + F + ++RK LFY +NII
Sbjct: 191 EWIFIDPEAFTENGEWAIRHRPAKMLLDEAAPAEEAGHQKVVFYLLIQRKPLFYVINIIA 250
Query: 118 PCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
PC+ IS + VL ++LP+ +G +K T++I++L++ VF LV + +P TS VPL+ KYL
Sbjct: 251 PCVLISSVAVLIYFLPAKAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQAVPLISKYLT 310
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR-RPL 227
F +++ + + VVVLNV RSP TH MA V++VF++ LP++L M RPL
Sbjct: 311 FLLVVTILIVVNAVVVLNVSLRSPHTHSMAGGVRKVFLRLLPQLLRMHVRPL 362
Score = 68 (29.0 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 321 EDWKYVALVLDRL-FLWIFTLAVLGGTAGIILQAPSLYDDRVP 362
E+W V VLDR+ FL + +L V G TAGI L A + +RVP
Sbjct: 465 EEWFLVGRVLDRVCFLVMLSLFVCG-TAGIFLMA---HYNRVP 503
>MGI|MGI:87894 [details] [associations]
symbol:Chrne "cholinergic receptor, nicotinic, epsilon
polypeptide" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IGI] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87894 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1145
KO:K04817 OrthoDB:EOG4DZ1V6 EMBL:J04698 EMBL:X55718 IPI:IPI00122860
PIR:S13592 RefSeq:NP_033733.1 UniGene:Mm.4980
ProteinModelPortal:P20782 SMR:P20782 STRING:P20782 PaxDb:P20782
PRIDE:P20782 DNASU:11448 Ensembl:ENSMUST00000102556 GeneID:11448
KEGG:mmu:11448 NextBio:278760 Bgee:P20782 Genevestigator:P20782
GermOnline:ENSMUSG00000014609 Uniprot:P20782
Length = 493
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 93/305 (30%), Positives = 150/305 (49%)
Query: 60 RVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIIIP 118
++ +D + F + EW I P + + P D+ + + +RRK LFY +NII+P
Sbjct: 191 KIDIDTAAFTENGEWAIDYCPGMIRRYEGGSTEGPGETDVIYTLIIRRKPLFYVINIIVP 250
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VPLLG+YLIF
Sbjct: 251 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIF 310
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M++ ++ + V+VLNV R+P TH +P ++++ ++ LPR+L P P+ A
Sbjct: 311 VMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLLGSSPP---PEDPRTAS 367
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCF-C 296
S G + L +E + + P + R C
Sbjct: 368 PARRASSVGILLRAEELILKKPRSELVFEGQRHRHGTWTAALCQNLGAAAPEI-RCCVDA 426
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWI-FTLAVLGGT----AGIIL 351
V F+AE TR Q+ + +E + DW + LD + W L +G T G
Sbjct: 427 VNFVAESTRDQEATGEELS------DWVRMGKALDNVCFWAALVLFSVGSTLIFLGGYFN 480
Query: 352 QAPSL 356
Q P L
Sbjct: 481 QVPDL 485
>UNIPROTKB|P13536 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087691 EMBL:M28307 IPI:IPI00699532 PIR:I45847
RefSeq:NP_776698.1 UniGene:Bt.4960 ProteinModelPortal:P13536
SMR:P13536 PRIDE:P13536 Ensembl:ENSBTAT00000053164 GeneID:281689
KEGG:bta:281689 CTD:1146 KO:K04818 OMA:VFYLLIQ NextBio:20805616
ArrayExpress:P13536 Uniprot:P13536
Length = 519
Score = 306 (112.8 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 66/172 (38%), Positives = 107/172 (62%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA + ++ + + + F + ++RK LFY +NII
Sbjct: 191 EWIFIDPEAFTENGEWAIRHRPAKMLLDEAAPAEEAGHQKVVFYLLIQRKPLFYVINIIA 250
Query: 118 PCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
PC+ IS + +L ++LP+ +G +K T++I++L++ VF LV + +P TS VPL+ KYL
Sbjct: 251 PCVLISSVAILIYFLPAKAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQAVPLISKYLT 310
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR-RPL 227
F +++ + + VVVLNV RSP TH MA V++VF++ LP++L M RPL
Sbjct: 311 FLLVVTILIVVNAVVVLNVSLRSPHTHSMARGVRKVFLRLLPQLLRMHVRPL 362
Score = 64 (27.6 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 321 EDWKYVALVLDRL-FLWIFTLAVLGGTAGIILQAPSLYDDRVP 362
++W V VLDR+ FL + +L V G TAGI L A + +RVP
Sbjct: 465 KEWFLVGRVLDRVCFLAMLSLFVCG-TAGIFLMA---HYNRVP 503
>WB|WBGene00000060 [details] [associations]
symbol:acr-21 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 KO:K05312 EMBL:FO080465
RefSeq:NP_498452.3 UniGene:Cel.23702 ProteinModelPortal:Q9N5U8
SMR:Q9N5U8 EnsemblMetazoa:F27B3.2 GeneID:185004
KEGG:cel:CELE_F27B3.2 UCSC:F27B3.2 CTD:185004 WormBase:F27B3.2
InParanoid:Q9N5U8 OMA:ALEWQQV NextBio:926724 Uniprot:Q9N5U8
Length = 469
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 61/172 (35%), Positives = 109/172 (63%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
DL+ + + EW ++ + A +N+ Y+CC EPY I ++T+ R+ +FY N+I+PC+ IS
Sbjct: 163 DLTNYITNTEWSLIGIRAEKNQVIYSCCPEPYPFIDVHVTIERRAMFYVFNLILPCVLIS 222
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
+ ++ FY+P+DSGEKVTL I+ L+S VF ++V E +PPT+ +PL+G Y ++LV+
Sbjct: 223 LIALMGFYMPTDSGEKVTLGITSLLSTTVFLMMVAEGMPPTAEALPLIGIYFGVTIMLVA 282
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHL 235
+ +TV +N+H + + P+++ ++L +IL +R Y+ H+
Sbjct: 283 LGTAMTVFTVNIHHTGVHGYPVPPFLQIFAFRYLSKILFVRIEPYHSIAHHV 334
>UNIPROTKB|H7BYH0 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00254 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889
EMBL:AC092165 HGNC:HGNC:1967 ProteinModelPortal:H7BYH0 SMR:H7BYH0
Ensembl:ENST00000389492 Bgee:H7BYH0 Uniprot:H7BYH0
Length = 465
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 108/341 (31%), Positives = 171/341 (50%)
Query: 38 KRESSRKNKDDLSPRRPPHRR-ERVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEPY 95
K ++ N+ DL + + E + +D F + EW I PA + + + +
Sbjct: 117 KSQTYSTNEIDLQLSQEDGQTIEWIFIDPEAFTENGEWAIQHRPAKMLLDPAAPAQEAGH 176
Query: 96 LDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFF 154
+ F + ++RK LFY +NII PC+ IS + +L +LP+ +G +K T++I++L++ VF
Sbjct: 177 QKVVFYLLIQRKPLFYVINIIAPCVLISSVAILIHFLPAKAGGQKCTVAINVLLAQTVFL 236
Query: 155 LLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFI 214
LV + +P TS VPL+ KYL F +++ + + VVVLNV RSP TH MA V++VF+
Sbjct: 237 FLVAKKVPETSQAVPLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMARGVRKVFL 296
Query: 215 QFLPRILVMR-RPLYNPDGSHLADGPLIGGSGG-SCKIHGHVSLSNILTEAILSSSPQDD 272
+ LP++L M RPL P L GS G S V+L +E + Q
Sbjct: 297 RLLPQLLRMHVRPLA-PAAVQDTQSRLQNGSSGWSITTGEEVALCLPRSELLFQ---QWQ 352
Query: 273 SKHLRPPAFSHAQCPPVMHRSCFC---------VRFIAEHTRMQDDST-KESTLIMVKED 322
+ L A + P + S FC ++ E + + ++S E+
Sbjct: 353 RQGLVAAALEKLEKGPELGLSQFCGSLKQAAPAIQACVEACNLIACARHQQSHFDNGNEE 412
Query: 323 WKYVALVLDRL-FLWIFTLAVLGGTAGIILQAPSLYDDRVP 362
W V VLDR+ FL + +L + G TAGI L A + +RVP
Sbjct: 413 WFLVGRVLDRVCFLAMLSLFICG-TAGIFLMA---HYNRVP 449
>UNIPROTKB|P07510 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0006936
"muscle contraction" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0015267 "channel activity"
evidence=TAS] [GO:0015464 "acetylcholine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 MIM:253290 Orphanet:33108
HOGENOM:HOG000006757 GO:GO:0015267 GO:GO:0006936 eggNOG:NOG291810
EMBL:AC092165 CTD:1146 KO:K04818 OMA:VFYLLIQ OrthoDB:EOG4R7V9N
EMBL:X01715 EMBL:X01716 EMBL:X01717 EMBL:X01718 EMBL:X01719
EMBL:X01720 EMBL:X01721 EMBL:X04759 EMBL:AK125362 IPI:IPI00746413
PIR:A23261 RefSeq:NP_005190.4 UniGene:Hs.248101
ProteinModelPortal:P07510 SMR:P07510 STRING:P07510
PhosphoSite:P07510 DMDM:126302510 PRIDE:P07510
Ensembl:ENST00000389494 Ensembl:ENST00000541596 GeneID:1146
KEGG:hsa:1146 UCSC:uc002vsx.1 GeneCards:GC02P233404 HGNC:HGNC:1967
MIM:100730 MIM:265000 neXtProt:NX_P07510 Orphanet:79449
PharmGKB:PA26499 InParanoid:P07510 BindingDB:P07510
ChEMBL:CHEMBL2613 GenomeRNAi:1146 NextBio:4768 Bgee:P07510
CleanEx:HS_CHRNG Genevestigator:P07510 GermOnline:ENSG00000196811
Uniprot:P07510
Length = 517
Score = 332 (121.9 bits), Expect = 9.6e-30, P = 9.6e-30
Identities = 108/342 (31%), Positives = 172/342 (50%)
Query: 37 FKRESSRKNKDDLSPRRPPHRR-ERVGVDLSEFYMSVEWDILEVPA-VRNEKFYTCCDEP 94
F+ ++ N+ DL + + E + +D F + EW I PA + + +
Sbjct: 168 FQSQTYSTNEIDLQLSQEDGQTIEWIFIDPEAFTENGEWAIQHRPAKMLLDPAAPAQEAG 227
Query: 95 YLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVF 153
+ + F + ++RK LFY +NII PC+ IS + +L +LP+ +G +K T++I++L++ VF
Sbjct: 228 HQKVVFYLLIQRKPLFYVINIIAPCVLISSVAILIHFLPAKAGGQKCTVAINVLLAQTVF 287
Query: 154 FLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVF 213
LV + +P TS VPL+ KYL F +++ + + VVVLNV RSP TH MA V++VF
Sbjct: 288 LFLVAKKVPETSQAVPLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMARGVRKVF 347
Query: 214 IQFLPRILVMR-RPLYNPDGSHLADGPLIGGSGG-SCKIHGHVSLSNILTEAILSSSPQD 271
++ LP++L M RPL P L GS G S V+L +E + Q
Sbjct: 348 LRLLPQLLRMHVRPLA-PAAVQDTQSRLQNGSSGWSITTGEEVALCLPRSELLFQ---QW 403
Query: 272 DSKHLRPPAFSHAQCPPVMHRSCFC---------VRFIAEHTRMQDDST-KESTLIMVKE 321
+ L A + P + S FC ++ E + + ++S E
Sbjct: 404 QRQGLVAAALEKLEKGPELGLSQFCGSLKQAAPAIQACVEACNLIACARHQQSHFDNGNE 463
Query: 322 DWKYVALVLDRL-FLWIFTLAVLGGTAGIILQAPSLYDDRVP 362
+W V VLDR+ FL + +L + G TAGI L A + +RVP
Sbjct: 464 EWFLVGRVLDRVCFLAMLSLFICG-TAGIFLMA---HYNRVP 501
>UNIPROTKB|D4A7Y5 [details] [associations]
symbol:Chrng "Acetylcholine receptor subunit gamma"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00254 RGD:2354 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 IPI:IPI00561094
ProteinModelPortal:D4A7Y5 Ensembl:ENSRNOT00000049268
ArrayExpress:D4A7Y5 Uniprot:D4A7Y5
Length = 467
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 101/314 (32%), Positives = 159/314 (50%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA T +E + + F + ++RK LFY +NII+
Sbjct: 139 EWIFIDPEAFTENGEWAIRHRPAKMLLDPVTPAEEAGHQKVVFYLLIQRKPLFYVINIIV 198
Query: 118 PCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
PC+ IS + +L ++LP+ +G +K T++ ++L++ VF LV + +P TS VPL+ KYL
Sbjct: 199 PCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLFLVAKKVPETSQAVPLISKYLT 258
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM----RRPLYNPDG 232
F M++ + + +VVVLNV RSP TH MA V++VF++ LP++L M R P D
Sbjct: 259 FLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKVFLRLLPQLLRMHVHPRAPAAVQDA 318
Query: 233 S-HLADG-----PLIGGSGGS-CKIHGHVSLS----NILTEAILSSSPQD-DSKHLRPPA 280
L +G P++ G C + N L +A+L + + +
Sbjct: 319 RLRLQNGSSSGWPIMTREEGDLCLPRSELLFRQRQRNGLVQAVLEKLENGPEMRQSQEFC 378
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRL-FLWIFT 339
S Q P + ++C + R Q +S E+W V VLDR+ FL + +
Sbjct: 379 GSLKQASPAI-QACVDACNLMARARHQ-----QSHFDSGNEEWLLVGRVLDRVCFLAMLS 432
Query: 340 LAVLGGTAGIILQA 353
L + G TAGI L A
Sbjct: 433 LFICG-TAGIFLMA 445
>RGD|2354 [details] [associations]
symbol:Chrng "cholinergic receptor, nicotinic, gamma (muscle)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO;IDA] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA;ISO]
[GO:0006812 "cation transport" evidence=ISO] [GO:0015276
"ligand-gated ion channel activity" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport" evidence=ISO]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2354 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1146
KO:K04818 OrthoDB:EOG4R7V9N EMBL:X74834 EMBL:X06364 IPI:IPI00196312
PIR:S13874 RefSeq:NP_062018.1 UniGene:Rn.44634
ProteinModelPortal:P18916 SMR:P18916 STRING:P18916 PRIDE:P18916
GeneID:25753 KEGG:rno:25753 UCSC:RGD:2354 InParanoid:P18916
ChEMBL:CHEMBL3767 NextBio:607951 ArrayExpress:P18916
Genevestigator:P18916 GermOnline:ENSRNOG00000019602 Uniprot:P18916
Length = 519
Score = 329 (120.9 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 101/314 (32%), Positives = 159/314 (50%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA T +E + + F + ++RK LFY +NII+
Sbjct: 191 EWIFIDPEAFTENGEWAIRHRPAKMLLDPVTPAEEAGHQKVVFYLLIQRKPLFYVINIIV 250
Query: 118 PCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
PC+ IS + +L ++LP+ +G +K T++ ++L++ VF LV + +P TS VPL+ KYL
Sbjct: 251 PCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLFLVAKKVPETSQAVPLISKYLT 310
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM----RRPLYNPDG 232
F M++ + + +VVVLNV RSP TH MA V++VF++ LP++L M R P D
Sbjct: 311 FLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKVFLRLLPQLLRMHVHPRAPAAVQDA 370
Query: 233 S-HLADG-----PLIGGSGGS-CKIHGHVSLS----NILTEAILSSSPQD-DSKHLRPPA 280
L +G P++ G C + N L +A+L + + +
Sbjct: 371 RLRLQNGSSSGWPIMTREEGDLCLPRSELLFRQRQRNGLVQAVLEKLENGPEMRQSQEFC 430
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRL-FLWIFT 339
S Q P + ++C + R Q +S E+W V VLDR+ FL + +
Sbjct: 431 GSLKQASPAI-QACVDACNLMARARHQ-----QSHFDSGNEEWLLVGRVLDRVCFLAMLS 484
Query: 340 LAVLGGTAGIILQA 353
L + G TAGI L A
Sbjct: 485 LFICG-TAGIFLMA 497
>UNIPROTKB|P18916 [details] [associations]
symbol:Chrng "Acetylcholine receptor subunit gamma"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2354 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1146
KO:K04818 OrthoDB:EOG4R7V9N EMBL:X74834 EMBL:X06364 IPI:IPI00196312
PIR:S13874 RefSeq:NP_062018.1 UniGene:Rn.44634
ProteinModelPortal:P18916 SMR:P18916 STRING:P18916 PRIDE:P18916
GeneID:25753 KEGG:rno:25753 UCSC:RGD:2354 InParanoid:P18916
ChEMBL:CHEMBL3767 NextBio:607951 ArrayExpress:P18916
Genevestigator:P18916 GermOnline:ENSRNOG00000019602 Uniprot:P18916
Length = 519
Score = 329 (120.9 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 101/314 (32%), Positives = 159/314 (50%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA T +E + + F + ++RK LFY +NII+
Sbjct: 191 EWIFIDPEAFTENGEWAIRHRPAKMLLDPVTPAEEAGHQKVVFYLLIQRKPLFYVINIIV 250
Query: 118 PCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
PC+ IS + +L ++LP+ +G +K T++ ++L++ VF LV + +P TS VPL+ KYL
Sbjct: 251 PCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLFLVAKKVPETSQAVPLISKYLT 310
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM----RRPLYNPDG 232
F M++ + + +VVVLNV RSP TH MA V++VF++ LP++L M R P D
Sbjct: 311 FLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKVFLRLLPQLLRMHVHPRAPAAVQDA 370
Query: 233 S-HLADG-----PLIGGSGGS-CKIHGHVSLS----NILTEAILSSSPQD-DSKHLRPPA 280
L +G P++ G C + N L +A+L + + +
Sbjct: 371 RLRLQNGSSSGWPIMTREEGDLCLPRSELLFRQRQRNGLVQAVLEKLENGPEMRQSQEFC 430
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRL-FLWIFT 339
S Q P + ++C + R Q +S E+W V VLDR+ FL + +
Sbjct: 431 GSLKQASPAI-QACVDACNLMARARHQ-----QSHFDSGNEEWLLVGRVLDRVCFLAMLS 484
Query: 340 LAVLGGTAGIILQA 353
L + G TAGI L A
Sbjct: 485 LFICG-TAGIFLMA 497
>WB|WBGene00000054 [details] [associations]
symbol:acr-15 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0045202 "synapse"
evidence=IC] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:FO080489
KO:K05312 GO:GO:0015464 PIR:E89134 RefSeq:NP_505206.2
ProteinModelPortal:O16926 SMR:O16926 EnsemblMetazoa:F25G6.4
GeneID:191602 KEGG:cel:CELE_F25G6.4 UCSC:F25G6.4 CTD:191602
WormBase:F25G6.4 eggNOG:NOG288903 InParanoid:O16926 OMA:AICIFLT
NextBio:949636 Uniprot:O16926
Length = 479
Score = 277 (102.6 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 58/169 (34%), Positives = 96/169 (56%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E+ D SEF + EW I++ K Y CC E Y DITF + +RR+TL+Y+ N+I P
Sbjct: 177 EKGDFDFSEFIPNGEWIIIDYRTNITVKQYECCPEQYEDITFTLHLRRRTLYYSFNLIAP 236
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ L +L F + ++ EKV L IS+ +++ +F ++ E+ P TS VPLLG +
Sbjct: 237 VLLTMILVILGFTVSPETCEKVGLQISVSLAICIFLTIMSELTPQTSEAVPLLGVFFHTC 296
Query: 179 MILVSISICVTVVVLNVHFRSPQTH-KMAPWVKRVFIQFLPRILVMRRP 226
+ ++ TV V + HFR+ H +M W++ + +++ P +L M+ P
Sbjct: 297 NFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRMKMP 345
Score = 87 (35.7 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSL 356
V+ I EH DD+ ++S + + +W++ A+V+DRL L F+L ++ + I L+AP L
Sbjct: 424 VKMIREH---DDDNDEDSRVAL---EWRFAAIVVDRLCLLAFSLLIVVVSIIIALRAPYL 477
Query: 357 Y 357
+
Sbjct: 478 F 478
>UNIPROTKB|H9KZ38 [details] [associations]
symbol:CHRNB2 "Neuronal acetylcholine receptor subunit
beta-2" species:9031 "Gallus gallus" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 Pfam:PF02932 GO:GO:0016021
PANTHER:PTHR18945 SUPFAM:SSF90112 GO:GO:0006811
GeneTree:ENSGT00700000104693 EMBL:AADN02064593
Ensembl:ENSGALT00000004270 OMA:ARACACY Uniprot:H9KZ38
Length = 190
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 80/196 (40%), Positives = 112/196 (57%)
Query: 130 FYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVT 189
F+LPSD GEK+TL IS+L++L VF LL+ +I+PPTSL VPL+GKYL+F M+LV+ SI +
Sbjct: 2 FFLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTS 61
Query: 190 VVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHL----------ADGP 239
V VLNVH RSP TH M PWV+ +F++ LP +L M++P N L A
Sbjct: 62 VCVLNVHHRSPTTHTMPPWVRTLFLRKLPALLFMKQPQQNCARQRLRQRRQTQERAAAAT 121
Query: 240 LIGGSGG-SCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR 298
L +G +C + + + E L+ + + PPA C + + VR
Sbjct: 122 LFLRAGARACACYANPGAAK--AEG-LNGYRERQGQGPDPPA----PCGCGLEEAVEGVR 174
Query: 299 FIAEHTRMQDDSTKES 314
FIA+H R +DD S
Sbjct: 175 FIADHMRSEDDDQSVS 190
>MGI|MGI:87895 [details] [associations]
symbol:Chrng "cholinergic receptor, nicotinic, gamma
polypeptide" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IGI] [GO:0015276
"ligand-gated ion channel activity" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=IGI] [GO:0042391 "regulation
of membrane potential" evidence=IGI] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87895
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810
OrthoDB:EOG4R7V9N EMBL:X03818 EMBL:X03819 EMBL:M30514 EMBL:M27455
EMBL:M22381 EMBL:S77465 IPI:IPI00118671 IPI:IPI00224935 PIR:I56566
UniGene:Mm.2810 ProteinModelPortal:P04760 SMR:P04760 STRING:P04760
PhosphoSite:P04760 PRIDE:P04760 UCSC:uc007bwh.1 InParanoid:P04760
BindingDB:P04760 ChEMBL:CHEMBL4579 Genevestigator:P04760
GermOnline:ENSMUSG00000026253 Uniprot:P04760
Length = 519
Score = 322 (118.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 101/314 (32%), Positives = 157/314 (50%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA +E + + F + ++RK LFY +NII
Sbjct: 191 EWIFIDPEAFTENGEWAIRHRPAKMLLDSVAPAEEAGHQKVVFYLLIQRKPLFYVINIIA 250
Query: 118 PCMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLI 176
PC+ IS + +L ++LP+ +G +K T++ ++L++ VF LV + +P TS VPL+ KYL
Sbjct: 251 PCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLFLVAKKVPETSQAVPLISKYLT 310
Query: 177 FAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR-RPLYNP---DG 232
F M++ + + +VVVLNV RSP TH MA V+++F++ LP++L M RPL D
Sbjct: 311 FLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKLFLRLLPQLLRMHVRPLAPAAVQDA 370
Query: 233 S-HLADG-----PLIGGSGGS-CKIHGHVSLS----NILTEAILSSSPQD-DSKHLRPPA 280
L +G P++ G C + N L +A+L + + +
Sbjct: 371 RFRLQNGSSSGWPIMAREEGDLCLPRSELLFRQRQRNGLVQAVLEKLENGPEVRQSQEFC 430
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRL-FLWIFT 339
S Q P + +A R Q S +S E+W V VLDR+ FL + +
Sbjct: 431 GSLKQASPAIQACVDACNLMARARRQQ--SHFDSG----NEEWLLVGRVLDRVCFLAMLS 484
Query: 340 LAVLGGTAGIILQA 353
L + G TAGI L A
Sbjct: 485 LFICG-TAGIFLMA 497
>UNIPROTKB|G3N2K7 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9913 "Bos taurus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00630000089708 EMBL:DAAA02052400
ProteinModelPortal:G3N2K7 Ensembl:ENSBTAT00000064296 Uniprot:G3N2K7
Length = 360
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 101/318 (31%), Positives = 156/318 (49%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGIS 123
D+S + + EWD++ V R+EKFY CC EPY D+TF +++RR+TL+Y +N++IPC+ IS
Sbjct: 73 DISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLNLLIPCVLIS 132
Query: 124 FLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 183
L +L F LP+DSGEK++L+ +Y MI+V
Sbjct: 133 ALALLVFLLPADSGEKISLA-----------------------------QYFASTMIIVG 163
Query: 184 ISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP---LYNPDGSH------ 234
+S+ VTV+VL H P KM W + + + + L M+RP P H
Sbjct: 164 LSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCS 223
Query: 235 LAD-------GP-------LIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPA 280
LA GP L G G +H + + + ++ SP D +HL A
Sbjct: 224 LASVEMSAVAGPPATNGNLLYIGFRGLDTMHCAPTPDSGVVCGRVACSPTHD-EHLLH-A 281
Query: 281 FSHAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTL 340
++ P + + VR+IA R QD+S E+ V +WK+ A V+DRL L F++
Sbjct: 282 GQPSEGDPDLAKILEEVRYIAHRFRCQDES--EA----VCSEWKFAACVVDRLCLMAFSV 335
Query: 341 AVLGGTAGIILQAPSLYD 358
+ T GI++ AP+ +
Sbjct: 336 FTILCTIGILMSAPNFVE 353
>UNIPROTKB|I3LP25 [details] [associations]
symbol:I3LP25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889 EMBL:CU929524
Ensembl:ENSSSCT00000031461 GeneTree:ENSGT00700000104693 OMA:REAFTEN
Uniprot:I3LP25
Length = 369
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 63/160 (39%), Positives = 103/160 (64%)
Query: 60 RVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPY-LDITFNITMRRKTLFYTVNIIIP 118
++ +D + + EW I P V + D+P D+T+ + +RRK LFY +NII+P
Sbjct: 191 KLEIDTEAYTENGEWAIDFCPGVIRRHDGSSPDDPGDSDVTYTLIIRRKPLFYVINIIVP 250
Query: 119 CMGISFLTVLTFYLPSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
C+ IS L +L ++LP+ +G +K T+SI++L++ VF L+ + IP TSL VPLLG+YLIF
Sbjct: 251 CVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLGRYLIF 310
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFL 217
M++ ++ + V+VLNV R+P TH ++P ++ + FL
Sbjct: 311 VMVVATLIVMNCVIVLNVSLRTPTTHTVSPRLRHALLGFL 350
>UNIPROTKB|F6XNB0 [details] [associations]
symbol:CHRNG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00620000087691
OMA:VFYLLIQ Ensembl:ENSCAFT00000017990 EMBL:AAEX03014447
Uniprot:F6XNB0
Length = 520
Score = 311 (114.5 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 106/322 (32%), Positives = 158/322 (49%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA +E + + F + ++RK LFY +NII
Sbjct: 191 EWIFIDPEAFTENGEWAIRHRPAKMLLDVAAPAEEAGHQKVVFYVLIQRKPLFYVINIIA 250
Query: 118 PCMGISFLTVLTFYLPSDS--GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 175
PC+ IS + +L ++LP+ + G+K T++I++L++ VF LV + +P TS VPL+ KYL
Sbjct: 251 PCVLISSVAILIYFLPAKAAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQAVPLISKYL 310
Query: 176 IFAMILVSISICVT-VVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM----------- 223
F ++ V+I I V VVVLNV RSP TH MA V++VF++ LP++L M
Sbjct: 311 TF-LLAVTILIVVNAVVVLNVSLRSPHTHSMAHGVRKVFLRLLPQLLRMHVRPPAPAAVR 369
Query: 224 --RRPLYNPDGSHLADGPLIGGSG-GSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPA 280
RR L N GS L P+ G C + ++ ++ + K P
Sbjct: 370 DTRRQLQN--GSSLG-WPITAGEDIALCLPRSELLFRQRQRNGLVRAALEKLEKGPEPGQ 426
Query: 281 F-----SHAQCPPVMH---RSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDR 332
S Q P + +C + +A H + DS E +W V VLDR
Sbjct: 427 SQELCGSLKQAAPAIQACVEACNLIA-LARHQQSHFDSGSE--------EWFLVGRVLDR 477
Query: 333 L-FLWIFTLAVLGGTAGIILQA 353
+ FL + +L V G TAGI L A
Sbjct: 478 VCFLAMLSLFVCG-TAGIFLMA 498
>UNIPROTKB|E2R2W1 [details] [associations]
symbol:CHRNG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0004889 GO:GO:0005892
ProteinModelPortal:E2R2W1 Ensembl:ENSCAFT00000017990 Uniprot:E2R2W1
Length = 525
Score = 311 (114.5 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 106/322 (32%), Positives = 158/322 (49%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEP-YLDITFNITMRRKTLFYTVNIII 117
E + +D F + EW I PA +E + + F + ++RK LFY +NII
Sbjct: 196 EWIFIDPEAFTENGEWAIRHRPAKMLLDVAAPAEEAGHQKVVFYVLIQRKPLFYVINIIA 255
Query: 118 PCMGISFLTVLTFYLPSDS--GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 175
PC+ IS + +L ++LP+ + G+K T++I++L++ VF LV + +P TS VPL+ KYL
Sbjct: 256 PCVLISSVAILIYFLPAKAAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQAVPLISKYL 315
Query: 176 IFAMILVSISICVT-VVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM----------- 223
F ++ V+I I V VVVLNV RSP TH MA V++VF++ LP++L M
Sbjct: 316 TF-LLAVTILIVVNAVVVLNVSLRSPHTHSMAHGVRKVFLRLLPQLLRMHVRPPAPAAVR 374
Query: 224 --RRPLYNPDGSHLADGPLIGGSG-GSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPA 280
RR L N GS L P+ G C + ++ ++ + K P
Sbjct: 375 DTRRQLQN--GSSLG-WPITAGEDIALCLPRSELLFRQRQRNGLVRAALEKLEKGPEPGQ 431
Query: 281 F-----SHAQCPPVMH---RSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDR 332
S Q P + +C + +A H + DS E +W V VLDR
Sbjct: 432 SQELCGSLKQAAPAIQACVEACNLIA-LARHQQSHFDSGSE--------EWFLVGRVLDR 482
Query: 333 L-FLWIFTLAVLGGTAGIILQA 353
+ FL + +L V G TAGI L A
Sbjct: 483 VCFLAMLSLFVCG-TAGIFLMA 503
>UNIPROTKB|B4E3W4 [details] [associations]
symbol:CHRND "cDNA FLJ58460, highly similar to
Acetylcholine receptor protein subunit delta" species:9606 "Homo
sapiens" [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 Pfam:PF02932 GO:GO:0016021 PANTHER:PTHR18945
SUPFAM:SSF90112 GO:GO:0006811 EMBL:AC092165 UniGene:Hs.156289
HGNC:HGNC:1965 EMBL:AK304890 IPI:IPI00910167 SMR:B4E3W4
STRING:B4E3W4 Ensembl:ENST00000457943 UCSC:uc010zmh.2
HOGENOM:HOG000070251 Uniprot:B4E3W4
Length = 323
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 85/244 (34%), Positives = 135/244 (55%)
Query: 133 PSDSG-EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVV 191
PS SG EK +++IS+L++ VF LL+ + +P TS+ +PL+GK+L+F M+LV++ + + V+
Sbjct: 76 PSSSGGEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVI 135
Query: 192 VLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGGS---GGSC 248
VLN+HFR+P TH ++ VK++F++ LP +L M RP DG + G L+ S G
Sbjct: 136 VLNIHFRTPSTHVLSEGVKKLFLETLPELLHMSRPA--EDGP--SPGALVRRSSSLGYIS 191
Query: 249 KIHGHVSL---SNILTEAILSSSPQDDSKHL----RPPAFSHAQCPPVMHRSCFCV---R 298
K + L S+++ E S ++ L RPPA S + + V
Sbjct: 192 KAEEYFLLKSRSDLMFEK--QSERHGLARRLTTARRPPASSEQAQQELFNELKPAVDGAN 249
Query: 299 FIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYD 358
FI H R Q++ +E K+ W VA +DRL L++ T ++ GTA I LQ +Y+
Sbjct: 250 FIVNHMRDQNNYNEE------KDSWNRVARTVDRLCLFVVTPVMVVGTAWIFLQG--VYN 301
Query: 359 DRVP 362
P
Sbjct: 302 QPPP 305
>ZFIN|ZDB-GENE-071012-5 [details] [associations]
symbol:htr3a "5-hydroxytryptamine (serotonin)
receptor 3A" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236
ZFIN:ZDB-GENE-071012-5 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866
EMBL:CABZ01000799 IPI:IPI00902192 ProteinModelPortal:F1QQX3
Ensembl:ENSDART00000078620 Uniprot:F1QQX3
Length = 391
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 87/294 (29%), Positives = 147/294 (50%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E V D S F EW++L V + N F D+ Y ++ F++ +RR+ LFYTVN+++P
Sbjct: 108 EAVKTDKSVFMNQGEWELLHVLSTYNA-FSIDNDDYYAEMKFHVVIRRRPLFYTVNLLLP 166
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
M + + ++ FYLP DSGE+V+ I++L+ VF ++V + +P T++ PL+G Y +
Sbjct: 167 SMFLMVMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVC 226
Query: 179 MILVSISICVTVVVLN-VHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M L+ IS+ +V+++ VH + Q+ ++ WVK + ++ +L +R S +D
Sbjct: 227 MALLVISLTESVLIVRLVHKQDLQS-RVPQWVKHLVLEKATVLLCIRNKKICSFRSQGSD 285
Query: 238 GPLIGGSGGSCKIH-GHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFC 296
PL + IH H S +D + L +H PPVM
Sbjct: 286 LPLYKDCFENT-IHCNHHSCEG----------SRDSGRTLGLGLSAHESGPPVMDGILRE 334
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL--GGTAG 348
+ I + +D+S + + ++W V VLD L ++ L VL G T G
Sbjct: 335 ITTIRQFLEKKDESRE------IAKEWLQVGYVLDILLFRVYLLTVLAYGITLG 382
>UNIPROTKB|E1BRV4 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889
GeneTree:ENSGT00630000089708 EMBL:AADN02020075 EMBL:AADN02020076
EMBL:AADN02020077 IPI:IPI00822501 Ensembl:ENSGALT00000038665
ArrayExpress:E1BRV4 Uniprot:E1BRV4
Length = 352
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/120 (48%), Positives = 84/120 (70%)
Query: 115 IIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKY 174
I P + + L + +F + +GEK+TLSIS+L+SL VF L++VE+IP TS VPL+GKY
Sbjct: 235 ISTPVLVLVLLVLSSFCI---AGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY 291
Query: 175 LIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRIL--VMRRPLYN-PD 231
++F M+ V SI +TV+V+N H RSP TH M PWV+++FI +P I+ M+RP + PD
Sbjct: 292 MLFTMVFVIASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMFSTMKRPSRDKPD 351
>WB|WBGene00017580 [details] [associations]
symbol:lgc-4 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866 GO:GO:0004889
EMBL:FO080202 PIR:A89606 RefSeq:NP_509556.4
ProteinModelPortal:P54245 SMR:P54245 EnsemblMetazoa:F18G5.4
GeneID:181155 KEGG:cel:CELE_F18G5.4 CTD:181155 WormBase:F18G5.4
eggNOG:NOG317908 HOGENOM:HOG000113319 InParanoid:P54245 OMA:QHEIREE
NextBio:912646 Uniprot:P54245
Length = 635
Score = 269 (99.8 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 58/171 (33%), Positives = 99/171 (57%)
Query: 64 DLSEFYMSVEWDILEVPAVRNE-KFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS + + E+D++++ AVR F + + + I I M R+ LFY N I+PC+ I
Sbjct: 276 DLSSYMNNSEFDLVDMTAVREVVTFPSDTNSDWPIIVIRIHMHRRPLFYVFNHIVPCVLI 335
Query: 123 SFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILV 182
S + VL F +P ++GEK+ + I+ L+S+ V+ + E IPPTS VPL+G Y + ++++V
Sbjct: 336 SSMAVLGFLMPPETGEKINMIITTLLSMGVYLQSITESIPPTSEGVPLIGMYYVSSLLMV 395
Query: 183 SISICVTVVVLNVHFRSP--QTHKMAPWVKRVFIQFLPRILVMRRPLYNPD 231
++ CV V+ LN+H Q + W+++ + +L MR + PD
Sbjct: 396 CLATCVNVITLNMHRNGAANQGRHVPAWMQKWILGYLATF--MRMSIREPD 444
Score = 56 (24.8 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 319 VKEDWKYVALVLDRLFLWIFTLAVLGGTAGIILQAPSLYDD 359
++ W+ +A V+DRL L +F A L T +L P Y D
Sbjct: 585 IQWQWQQLASVVDRLLLCLFCTATLF-TIICLLIVPVAYRD 624
>RGD|61818 [details] [associations]
symbol:Htr3a "5-hydroxytryptamine (serotonin) receptor 3A,
ionotropic" species:10116 "Rattus norvegicus" [GO:0004993 "serotonin
receptor activity" evidence=ISO] [GO:0005232 "serotonin-activated
cation-selective channel activity" evidence=IDA] [GO:0005249
"voltage-gated potassium channel activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007210 "serotonin receptor signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEP] [GO:0051378 "serotonin binding" evidence=ISO]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236 RGD:61818
GO:GO:0005737 GO:GO:0005887 GO:GO:0071363 GO:GO:0042220
GO:GO:0007268 CTD:3359 eggNOG:NOG302526 HOGENOM:HOG000241519
HOVERGEN:HBG106638 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
KO:K04819 OMA:GKSPNIP GO:GO:0005232 OrthoDB:EOG4Z62NF EMBL:D49395
EMBL:U01227 IPI:IPI00388902 PIR:I58179 RefSeq:NP_077370.2
UniGene:Rn.55109 ProteinModelPortal:P35563 STRING:P35563
TCDB:1.A.9.2.2 PhosphoSite:P35563 Ensembl:ENSRNOT00000008965
GeneID:79246 KEGG:rno:79246 UCSC:RGD:61818
GeneTree:ENSGT00570000078866 InParanoid:P35563 BindingDB:P35563
ChEMBL:CHEMBL2411 NextBio:614706 ArrayExpress:P35563
Genevestigator:P35563 GermOnline:ENSRNOG00000006595 GO:GO:0030424
GO:GO:0043025 GO:GO:0005249 Uniprot:P35563
Length = 483
Score = 277 (102.6 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 75/286 (26%), Positives = 135/286 (47%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E V D S F EW++L V + ++F Y ++ F + +RR+ LFY V++++P
Sbjct: 199 EEVRSDKSIFINQGEWELLGV-FTKFQEFSIETSNSYAEMKFYVVIRRRPLFYAVSLLLP 257
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ + + ++ F LP DSGE+V+ I++L+ VF ++V + +P T++ PL+G Y +
Sbjct: 258 SIFLMVVDIVGFCLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVC 317
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM-RRPLYNPDGSHLAD 237
M L+ IS+ T+ ++ + + + W++ + + + +L + +P+ +H
Sbjct: 318 MALLVISLAETIFIVQLVHKQDLQRPVPDWLRHLVLDRIAWLLCLGEQPM-----AHRPP 372
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCV 297
C G+ S++ SPQD K R + PP S
Sbjct: 373 ATFQANKTDDCSAMGN-HCSHV-------GSPQDLEKTSRS---RDSPLPPPREASLAVR 421
Query: 298 RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
+ E + ++ K + V DW V VLDRL I+ LAVL
Sbjct: 422 GLLQELSSIRHSLEKRDEMREVARDWLRVGYVLDRLLFRIYLLAVL 467
>UNIPROTKB|F1NGS5 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:AADN02041811 IPI:IPI00592020
Ensembl:ENSGALT00000011338 Uniprot:F1NGS5
Length = 471
Score = 276 (102.2 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 80/302 (26%), Positives = 147/302 (48%)
Query: 48 DLSPRRPPHRRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 107
+LS R P E V D S F EW++L V + ++F + Y ++ F + +RR+
Sbjct: 175 NLSLWRQP---ELVKFDRSVFMNQGEWELLYVLS-HFQEFSVKSSDSYAEMKFYVVIRRR 230
Query: 108 TLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLV 167
LFYT+N+++P + + + ++ FYLP +SGE+V+ I++L+ VF ++V + +P T++
Sbjct: 231 PLFYTINLLLPSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAVG 290
Query: 168 VPLLGKYLIFAMILVSISICVTVVVLN-VHFRSPQTHKMAPWVKRVFIQFLPRIL-VMRR 225
PL+G Y + M L+ IS+ T+ ++ VH + Q H + WVK + ++ +L + R
Sbjct: 291 TPLIGIYFVVCMALLVISLTETIFIVRLVHKQDLQPH-VPSWVKHLLLERATALLCIWDR 349
Query: 226 PLYNPDGSHLAD-GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHA 284
++ + +D + + + K++ + S E S+ P S PA
Sbjct: 350 KKFSQSRTQSSDISRHVENNDSTAKLNHYGSEDPREREVAGSTRPTPASA---TPAEGSL 406
Query: 285 QCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLG 344
++H +F+ + +D V +W V VLD L + +AVL
Sbjct: 407 LIHSILHEITTIRQFLEKRDEFRD----------VAREWLQVGYVLDVLLFRAYLVAVLA 456
Query: 345 GT 346
T
Sbjct: 457 YT 458
>UNIPROTKB|F1N4Y2 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 CTD:3359 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K04819 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:DAAA02040317 IPI:IPI00685680
RefSeq:NP_001180098.1 UniGene:Bt.106425 Ensembl:ENSBTAT00000014292
GeneID:617674 KEGG:bta:617674 BindingDB:F1N4Y2 NextBio:20900785
Uniprot:F1N4Y2
Length = 484
Score = 276 (102.2 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 77/286 (26%), Positives = 138/286 (48%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E+V D S F EW++L V + ++F + Y ++ F + +RR+ LFY V++++P
Sbjct: 200 EKVKFDRSVFMNQGEWELLGV-LTQFQEFSIESSDSYAEMKFYVVIRRRPLFYAVSLLLP 258
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ + + ++ FYLP DSGE+V+ I++L+ VF ++V + +P T++ PL+G Y +
Sbjct: 259 SIFLMVVDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVC 318
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADG 238
M L+ IS+ T++++ + + + W++ + ++ + +L + D S A
Sbjct: 319 MALLVISLAETILIVRLVHKQDLQQPVPAWLRHLVLERVTLLLCLG------DQS-TARR 371
Query: 239 PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR 298
P + + K + N + P+D K R PP + VR
Sbjct: 372 P--AATSQAAKTDDCSDMGNHYSHL---GGPRDLEKTPR----GRGSPPPPPREASLAVR 422
Query: 299 -FIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
+ E T ++ K V DW V VLDRL I+ LAVL
Sbjct: 423 GLLQELTSIRHFLEKREGSREVARDWLRVGSVLDRLLFRIYLLAVL 468
>WB|WBGene00000951 [details] [associations]
symbol:deg-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043067 "regulation of
programmed cell death" evidence=IMP] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00570000078866 KO:K05312 EMBL:U19747
EMBL:U19746 EMBL:Z74039 PIR:T23269 RefSeq:NP_505897.1
UniGene:Cel.34237 ProteinModelPortal:P54244 SMR:P54244
STRING:P54244 PaxDb:P54244 EnsemblMetazoa:K03B8.9.1
EnsemblMetazoa:K03B8.9.2 GeneID:3565200 KEGG:cel:CELE_K03B8.9
UCSC:K03B8.9.2 CTD:3565200 WormBase:K03B8.9 eggNOG:NOG256681
HOGENOM:HOG000019549 InParanoid:P54244 OMA:TERYMNI NextBio:955575
GO:GO:0043067 Uniprot:P54244
Length = 564
Score = 250 (93.1 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 57/184 (30%), Positives = 100/184 (54%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
V + F + EW + R+E Y CC EP++ + ++ ++RK L+Y VN+IIP I
Sbjct: 221 VSMQSFIPNEEWQVKSFKIHRHEYKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSII 280
Query: 123 SFLTVLTFYLPS----DSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ + + F+ P+ D EK+ L I+ L+++ + L+V + +P TS VPL+ + +
Sbjct: 281 TLVAITGFFTPASTDDDRTEKINLGITTLLAMSILMLMVSDQMPTTSEFVPLIAWFYLSI 340
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMR--RPLYNPDGSHLA 236
+I++SI +T VVL+V R +++ +F LP++L++ PL G L
Sbjct: 341 IIIISIGTFLTSVVLSVQGRRQYGRNPPQFIRYIFFVLLPQVLLLNVPPPLQTLWGE-LD 399
Query: 237 DGPL 240
D PL
Sbjct: 400 DDPL 403
Score = 73 (30.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 322 DWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
+W+++A VLDR L +F AV+ TAG+IL
Sbjct: 516 EWEFLATVLDRFLLIVFVGAVVIVTAGLIL 545
>UNIPROTKB|P46098 [details] [associations]
symbol:HTR3A "5-hydroxytryptamine receptor 3A" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004993
"serotonin receptor activity" evidence=IDA;NAS] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0006810
"transport" evidence=NAS] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005232 "serotonin-activated cation-selective
channel activity" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007586 "digestion" evidence=TAS] [GO:0051378
"serotonin binding" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0007210 "serotonin receptor signaling pathway"
evidence=IDA;NAS] Reactome:REACT_15518 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008132
InterPro:IPR008133 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471065 GO:GO:0004993 DrugBank:DB00370
GO:GO:0051378 GO:GO:0007268 DrugBank:DB00604 CTD:3359
eggNOG:NOG302526 HOGENOM:HOG000241519 HOVERGEN:HBG106638
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:D49394
EMBL:S82612 EMBL:AJ003078 EMBL:AJ003079 EMBL:AJ005205 EMBL:AF498984
EMBL:BT007204 EMBL:CD014118 EMBL:AK299973 EMBL:AP000908
EMBL:BC002354 EMBL:BC004453 IPI:IPI00179555 IPI:IPI00465351
IPI:IPI00748737 RefSeq:NP_000860.2 RefSeq:NP_001155244.1
RefSeq:NP_998786.2 UniGene:Hs.413899 ProteinModelPortal:P46098
SMR:P46098 STRING:P46098 TCDB:1.A.9.2.1 PhosphoSite:P46098
DMDM:1168222 PRIDE:P46098 DNASU:3359 Ensembl:ENST00000299961
Ensembl:ENST00000355556 Ensembl:ENST00000375498
Ensembl:ENST00000504030 Ensembl:ENST00000506841 GeneID:3359
KEGG:hsa:3359 UCSC:uc010rxb.2 GeneCards:GC11P113879 HGNC:HGNC:5297
MIM:182139 neXtProt:NX_P46098 PharmGKB:PA29555 KO:K04819
OMA:GKSPNIP BindingDB:P46098 ChEMBL:CHEMBL1899 DrugBank:DB00969
DrugBank:DB01161 DrugBank:DB00757 DrugBank:DB00889 DrugBank:DB00904
DrugBank:DB00377 DrugBank:DB00721 DrugBank:DB01199 GenomeRNAi:3359
NextBio:13282 ArrayExpress:P46098 Bgee:P46098 CleanEx:HS_HTR3A
Genevestigator:P46098 GermOnline:ENSG00000166736 GO:GO:0005232
GO:GO:0007586 Uniprot:P46098
Length = 478
Score = 274 (101.5 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 75/294 (25%), Positives = 138/294 (46%)
Query: 59 ERVGVDLSEFYMSVEWDILEV-PAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIII 117
E+V D S F EW++L V P R +F Y ++ F + +RR+ LFY V++++
Sbjct: 194 EKVKSDRSVFMNQGEWELLGVLPYFR--EFSMESSNYYAEMKFYVVIRRRPLFYVVSLLL 251
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
P + + + ++ FYLP +SGE+V+ I++L+ VF ++V + +P T++ PL+G Y +
Sbjct: 252 PSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVV 311
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLAD 237
M L+ IS+ T+ ++ + + + W++ + ++ + +L +R S
Sbjct: 312 CMALLVISLAETIFIVRLVHKQDLQQPVPAWLRHLVLERIAWLLCLREQ----STSQRPP 367
Query: 238 GPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCV 297
C G+ S++ SP+D PP PP S
Sbjct: 368 ATSQATKTDDCSAMGN-HCSHMGGPQDFEKSPRD---RCSPP-------PPPREASLAVC 416
Query: 298 RFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGIIL 351
+ E + ++ K + V DW V VLD+L I+ LAVL + +++
Sbjct: 417 GLLQELSSIRQFLEKRDEIREVARDWLRVGSVLDKLLFHIYLLAVLAYSITLVM 470
>UNIPROTKB|I3LTU2 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:FP312770
Ensembl:ENSSSCT00000025422 Uniprot:I3LTU2
Length = 489
Score = 273 (101.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 80/299 (26%), Positives = 137/299 (45%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E V D S F EW++L V + ++F Y ++ F + +RR+ LFY V++++P
Sbjct: 205 ENVKFDRSVFMNQGEWELLGV-LTQFQEFSIESSSSYAEMKFYVVIRRRPLFYAVSLLLP 263
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ + + ++ FYLP DSGE+V+ I++L+ VF ++V + +P T++ PL+G Y +
Sbjct: 264 SIFLMVMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVC 323
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM------RRPLYNPDG 232
M L+ IS+ T+ ++ + + + W++ + ++ + +L + RRP P
Sbjct: 324 MALLVISLAETIFIVRLVHKQDLQQPVPAWLRHLVLERVALLLCLGEQSTSRRP---PAT 380
Query: 233 SHLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHR 292
S G C HV P+D K R PP
Sbjct: 381 SQATKTDDCSDVGNHCS---HVG------------GPRDLEKTPR----GRGSPPPPPRE 421
Query: 293 SCFCVR-FIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLGGTAGII 350
+ VR + E T ++ K V DW V VLDRL I+ LAVL + ++
Sbjct: 422 ASLAVRGLLQELTSIRHFLEKREESREVARDWLRVGSVLDRLLFRIYLLAVLAYSVTLV 480
>MGI|MGI:96282 [details] [associations]
symbol:Htr3a "5-hydroxytryptamine (serotonin) receptor 3A"
species:10090 "Mus musculus" [GO:0004993 "serotonin receptor
activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005232 "serotonin-activated
cation-selective channel activity" evidence=ISO] [GO:0005249
"voltage-gated potassium channel activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007210 "serotonin receptor
signaling pathway" evidence=ISO] [GO:0015276 "ligand-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051378 "serotonin binding"
evidence=ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236 MGI:MGI:96282
GO:GO:0016021 GO:GO:0005886 GO:GO:0004993 GO:GO:0051378 CTD:3359
eggNOG:NOG302526 HOGENOM:HOG000241519 HOVERGEN:HBG106638
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 KO:K04819 EMBL:M74425 EMBL:Z22772 EMBL:Z22773
EMBL:X72395 EMBL:X79283 IPI:IPI00222698 IPI:IPI00229388 PIR:S41757
RefSeq:NP_038589.2 UniGene:Mm.4831 ProteinModelPortal:P23979
SMR:P23979 DIP:DIP-48769N STRING:P23979 PhosphoSite:P23979
PRIDE:P23979 GeneID:15561 KEGG:mmu:15561 InParanoid:P23979
OrthoDB:EOG4Z62NF BindingDB:P23979 ChEMBL:CHEMBL4972 NextBio:288512
CleanEx:MM_HTR3A Genevestigator:P23979
GermOnline:ENSMUSG00000032269 Uniprot:P23979
Length = 487
Score = 267 (99.0 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 77/287 (26%), Positives = 132/287 (45%)
Query: 59 ERVGVDLSEFYMSVEWDILEV-PAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIII 117
E V D S F EW++LEV P + +F Y ++ F + +RR+ LFY V++++
Sbjct: 198 EEVRSDKSIFINQGEWELLEVFPQFK--EFSIDISNSYAEMKFYVIIRRRPLFYAVSLLL 255
Query: 118 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIF 177
P + + + ++ F LP DSGE+V+ I++L+ VF ++V + +P T + PL+G Y +
Sbjct: 256 PSIFLMVVDIVGFCLPPDSGERVSFKITLLLGYSVFLIIVSDTLPAT-IGTPLIGVYFVV 314
Query: 178 AMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM-RRPLYNPDGSHLA 236
M L+ IS+ T+ ++ + + + W++ + + + IL + +P+ +H
Sbjct: 315 CMALLVISLAETIFIVRLVHKQDLQRPVPDWLRHLVLDRIAWILCLGEQPM-----AHRP 369
Query: 237 DGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFC 296
C G L + PQD K P + PP S
Sbjct: 370 PATFQANKTDDCS--GSDLLPAMGNHCSHVGGPQDLEK---TPRGRGSPLPPPREASLAV 424
Query: 297 VRFIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
+ E + ++ K + V DW V VLDRL I+ LAVL
Sbjct: 425 RGLLQELSSIRHFLEKRDEMREVARDWLRVGYVLDRLLFRIYLLAVL 471
>UNIPROTKB|I3L3Q9 [details] [associations]
symbol:CHRNB1 "Acetylcholine receptor subunit beta"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889 HGNC:HGNC:1961
EMBL:AC113189 Ensembl:ENST00000570557 Uniprot:I3L3Q9
Length = 316
Score = 246 (91.7 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 50/109 (45%), Positives = 74/109 (67%)
Query: 137 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVH 196
GEK+ LSI L++L VF LL+ + +P TSL VP++ KYL+F M+LV+ S+ ++VVVLN+H
Sbjct: 162 GEKMGLSIFALLTLTVFLLLLADKVPETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNLH 221
Query: 197 FRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADGPLIGGSG 245
RSP TH+M WV+++FI LP L ++RP P+ + + P G
Sbjct: 222 HRSPHTHQMPLWVRQIFIHKLPLYLRLKRP--KPERDLMPEPPHCSSPG 268
>WB|WBGene00013534 [details] [associations]
symbol:acr-24 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 EMBL:AL132862 RefSeq:NP_001255865.1
ProteinModelPortal:H2KML8 SMR:H2KML8 EnsemblMetazoa:Y73F8A.30b
GeneID:190686 KEGG:cel:CELE_Y73F8A.30 CTD:190686
WormBase:Y73F8A.30b OMA:FLPHIRL Uniprot:H2KML8
Length = 578
Score = 231 (86.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 60/210 (28%), Positives = 105/210 (50%)
Query: 21 FYPYHTAARSTEDLSRFKRESSRKNKDDLSPRRPPHRRERVGVDLSEFYMSVEWDILEVP 80
F+PY A + S +K D++ P H E V +D F + EW ++
Sbjct: 172 FFPYDQQA------CKLTISSWTSSKSDIN-YEPEH--ESVNMD--NFLPNEEWVVVSFN 220
Query: 81 AVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLP----SDS 136
R E+ + CC EP++ + + +RRK L+Y VN++IP I+ + V F+ S+
Sbjct: 221 IKRVEEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSER 280
Query: 137 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVH 196
EK++L I L+++ + ++V E +P +S VPL G + + + ++ I T +LNVH
Sbjct: 281 REKLSLGIDSLLAMSILMMMVSEQMPTSSDFVPLFGIFYLSIIFIIFIGTLFTAFILNVH 340
Query: 197 FRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
+ ++P V +F + + L MR P
Sbjct: 341 LQKMYAKPVSPIVSYIFFGRIAQWLRMRPP 370
Score = 77 (32.2 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 270 QDDSKHLRPPAFS--HAQCPPVMHRSCFCVRFIAEHTRMQDDSTKESTLIM-VKEDWKYV 326
Q + K + P A S H + P+M I+ + D + ES L +W+Y+
Sbjct: 478 QANRKKMAPSAISVPHGEPGPLM----LSASAISAFSVTGDSTILESKLKRRYALEWEYL 533
Query: 327 ALVLDRLFLWIFTLAVLGGTAGIIL 351
A VLDR+ L +F+L V T+ +IL
Sbjct: 534 ASVLDRVLLIVFSLVVFAVTSIMIL 558
>UNIPROTKB|O70212 [details] [associations]
symbol:HTR3A "5-hydroxytryptamine receptor 3A"
species:10141 "Cavia porcellus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0006812 "cation transport"
evidence=IDA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030285 EMBL:AF006461 EMBL:AF006462 RefSeq:NP_001166178.1
ProteinModelPortal:O70212 STRING:O70212 GeneID:100135547 CTD:3359
eggNOG:NOG302526 HOGENOM:HOG000241519 HOVERGEN:HBG106638
BindingDB:O70212 ChEMBL:CHEMBL3666 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 GO:GO:0006812 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 Uniprot:O70212
Length = 490
Score = 254 (94.5 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 73/285 (25%), Positives = 130/285 (45%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E+V D S F EW++L V E + ++ F + +RR+ LFY V +++P
Sbjct: 199 EKVKSDKSVFMNQGEWELLGVLTEFLEFSDRESRGSFAEMKFYVVIRRRPLFYAVTLLLP 258
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ + + ++ FYLP DSGE+V+ I++L+ VF ++V + +P T++ PL+ Y +
Sbjct: 259 SIFLMIVDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLISVYFVVC 318
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSHLADG 238
M L+ IS+ T++++ + + + W++ + ++ + +L + L SH G
Sbjct: 319 MALLVISLAETILIVRLVHKQDLQQPVPLWLRHLVLERIAGLLCLGEQLT----SHR--G 372
Query: 239 PLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQCPPVMHRSCFCVR 298
P + + G L + PQD K R + PP S
Sbjct: 373 PATLQATKTDDFSGSTLLPAMGNHCGPLGGPQDLEKTSRGRG---SPPPPPREASLAMCG 429
Query: 299 FIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
+ E ++ K V DW V VLD+L ++ LAVL
Sbjct: 430 LLQELASIRHFLEKREETREVARDWLRVGSVLDKLLFRVYLLAVL 474
>WB|WBGene00000059 [details] [associations]
symbol:acr-20 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 HOGENOM:HOG000019549 EMBL:Z83120
RefSeq:NP_001122627.1 ProteinModelPortal:B1Q281 SMR:B1Q281
EnsemblMetazoa:R06A4.10c GeneID:187632 KEGG:cel:CELE_R06A4.10
UCSC:R06A4.10a CTD:187632 WormBase:R06A4.10c eggNOG:NOG297360
InParanoid:B1Q281 OMA:CIENEGW NextBio:935932 ArrayExpress:B1Q281
Uniprot:B1Q281
Length = 556
Score = 226 (84.6 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 43/124 (34%), Positives = 76/124 (61%)
Query: 74 WDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLP 133
W++L +R+E Y CC Y + F +T++RK L+Y +N+IIP I+F++++ F+
Sbjct: 204 WNVLSTSVIRHENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFST 263
Query: 134 SDSGE----KVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSIS-ICV 188
S E K+TL I+ L+S+ + +V + +P TS +PL+G + ++L+S S IC
Sbjct: 264 SSINEPREEKITLGITTLLSMSILIFMVSDKMPSTSSFIPLIGLFYTSMILLISFSTICS 323
Query: 189 TVVV 192
+VV+
Sbjct: 324 SVVI 327
Score = 62 (26.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 40/167 (23%), Positives = 66/167 (39%)
Query: 198 RSPQTHKMAPWVKRVFIQFLPRILVMRRPLYNPDGSH-----LADGPLIGGSGGSCKIHG 252
R K + W RV+ L R +R+ + S L LI G C I+
Sbjct: 377 RQQMGRKQSLWT-RVYK--LAREQALRKDVQTSQNSSKFNEVLTPEKLIDNGGKRCTINK 433
Query: 253 HVSL---SNILTEAILSSSPQDDSK-----HLRPPAFSHAQCPPVMHRSCFCVRFIAEHT 304
V+ S I+ + + + +DD + L Q P +H++ C F +
Sbjct: 434 DVTCISDSGIVAMGVPTLASEDDDQDVSLLELETTPTPAMQRPTRLHKASTCGSFDSMMF 493
Query: 305 RMQDDSTKEST---LIMVKEDWKYVALVLDRLFL----WIFTLAVLG 344
R + T L ++ DW +A +L+R+FL +IF L +G
Sbjct: 494 RQIEVPVSPRTARNLAEIEYDW--LAALLERIFLITFLFIFVLTSIG 538
>WB|WBGene00000056 [details] [associations]
symbol:acr-17 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 EMBL:FO080714 GeneID:191603
KEGG:cel:CELE_F53E10.2 CTD:191603 RefSeq:NP_001023961.1
ProteinModelPortal:Q6F6K3 SMR:Q6F6K3 PRIDE:Q6F6K3
EnsemblMetazoa:F53E10.2b UCSC:F53E10.2a WormBase:F53E10.2b
HOGENOM:HOG000021444 InParanoid:Q6F6K3 OMA:PDISYFF NextBio:949640
ArrayExpress:Q6F6K3 Uniprot:Q6F6K3
Length = 515
Score = 218 (81.8 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 48/132 (36%), Positives = 78/132 (59%)
Query: 65 LSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISF 124
L+ + ++EW +++ N K+Y CC PY DI++ ++R +Y +IIP I+
Sbjct: 202 LNHYIPNMEWKLVDFRYRNNLKYYDCCPNPYPDISYFFAIKRNPSYYLFTLIIPSAFITI 261
Query: 125 LTVLTFYLP-SDSGE---KVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKY---LIF 177
+TV+ F+ P S +GE KV+L ++ L+SL + ++V + +P TS VPLLG+Y LIF
Sbjct: 262 VTVIGFFTPHSSTGENTEKVSLGVTALLSLAIILMMVSDKLPATSNSVPLLGQYYIGLIF 321
Query: 178 AMILVSISICVT 189
M L + C T
Sbjct: 322 IMFLATY--CTT 331
Score = 70 (29.7 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 9/38 (23%), Positives = 26/38 (68%)
Query: 306 MQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
++ D T + L ++++W+ +A +L+++ +WIF ++ +
Sbjct: 452 IRQDLTSQEHLKRIRKEWQMLARMLEKIIMWIFIISTV 489
>WB|WBGene00000057 [details] [associations]
symbol:acr-18 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 HSSP:P02711 KO:K05312 EMBL:Z81071
EMBL:AY523513 PIR:T21509 RefSeq:NP_506868.2 UniGene:Cel.23972
ProteinModelPortal:G5EG72 SMR:G5EG72 EnsemblMetazoa:F28F8.1
GeneID:191604 KEGG:cel:CELE_F28F8.1 CTD:191604 WormBase:F28F8.1
OMA:VEENEME NextBio:949646 Uniprot:G5EG72
Length = 510
Score = 231 (86.4 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 47/155 (30%), Positives = 88/155 (56%)
Query: 64 DLSEFYM-SVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
D E Y+ + EW + + +K Y CC P+ D+T+ + +RR +Y +++IP I
Sbjct: 192 DNLELYIRNTEWGLTDFRVKIYQKIYDCCPHPFPDVTYFMVLRRSPSYYIFSLVIPSAFI 251
Query: 123 SFLTVLTFYLP-SDSGE---KVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ +T++ F+ P S +GE KV+L ++ L+S+ + ++V + +P TS V+PL+GKY I
Sbjct: 252 TVVTIVGFFTPHSTTGENTEKVSLGVTALLSMAIIMMMVSDEVPATSEVIPLIGKYYIGL 311
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVF 213
+ L+ ++ T + L+ R ++ P V+ F
Sbjct: 312 IFLIFMAAFTTTLTLSYQMRGNSGQEVDPRVRDFF 346
Score = 44 (20.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 313 ESTLIMVKEDWKYVALVLDRLFLWIFTLAVL 343
E L +K +W+ V ++DR ++ + L +
Sbjct: 453 ERELKRIKFEWQQVTRLIDRCIMFSYILITI 483
>UNIPROTKB|F1PXW4 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:AAEX03003482 EMBL:AAEX03003480
EMBL:AAEX03003481 Ensembl:ENSCAFT00000021510 Uniprot:F1PXW4
Length = 508
Score = 201 (75.8 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 38/115 (33%), Positives = 73/115 (63%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
E+V +D + F EW++L V + ++F + Y +I + +RR+ LFYTV++++P
Sbjct: 194 EKVKLDKTIFMNQGEWELLGV-LTQFQEFSMESNSCYAEIKCYVVIRRRPLFYTVSLLLP 252
Query: 119 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGK 173
+ + + ++ FYLP DSGE+V+ I++L+ VF ++V + +P T++ PL+G+
Sbjct: 253 SIFLMLMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGR 307
Score = 76 (31.8 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 41/186 (22%), Positives = 72/186 (38%)
Query: 172 GKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVM------RR 225
G Y + M L+ +S+ T+ ++ + + + W++ + ++ + +L + RR
Sbjct: 336 GVYFVVCMALLVMSLAETIFIVRLVHKQDLQQPVPAWLRHLVLERVALLLCLGEQSASRR 395
Query: 226 PLYNPDGSHLADGPLIGGSGGSCKIHGHVSLSNILTEAILSSSPQDDSKHLRPPAFSHAQ 285
P P S G C H+ + P+D K R S
Sbjct: 396 P---PATSQTTKTDDCSDMGNHCN---HLGV------------PRDLEKTPR----SRGS 433
Query: 286 CPPVMHRSCFCVR-FIAEHTRMQDDSTKESTLIMVKEDWKYVALVLDRLFLWIFTLAVLG 344
PP S VR + E + ++ K V +W +V VLDRL I+ +AVL
Sbjct: 434 PPPPPRESSLAVRGLLKELSSIRHFLEKRDESREVAREWLHVGSVLDRLLFRIYLVAVLA 493
Query: 345 GTAGII 350
+ +I
Sbjct: 494 YSITLI 499
>ZFIN|ZDB-GENE-071012-4 [details] [associations]
symbol:htr3b "5-hydroxytryptamine (serotonin)
receptor 3B" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236
ZFIN:ZDB-GENE-071012-4 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866
EMBL:BX296544 IPI:IPI00498922 ProteinModelPortal:F1QMX1
Ensembl:ENSDART00000088459 Uniprot:F1QMX1
Length = 443
Score = 228 (85.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 50/162 (30%), Positives = 92/162 (56%)
Query: 48 DLSPRRPPHRRERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCC--DEPYLDITFNITMR 105
DL+ RP E + D EF EW++L VP+ +++T D Y I FN+ +R
Sbjct: 179 DLALWRPA---EEIANDTREFMNDGEWELLGVPS----RYWTLNLEDRDYAQIQFNVLIR 231
Query: 106 RKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTS 165
R+ L Y V ++IP + + + V++FYLP +SG ++T SIL+ V + +++ IP T+
Sbjct: 232 RRPLLYVVGLLIPSIFLMVVDVISFYLPPNSGTRITFKTSILLGYTVIRVNLMDEIPATA 291
Query: 166 LVVPLLGKYLIFAMILVSISICVTVVVLNV-HFRSPQTHKMA 206
+ PL+G + M L+ +S+ +++ V+ + H+ + +M+
Sbjct: 292 IKTPLIGVFFAICMALLLLSLAMSIFVVKLLHYSEKEVKEMS 333
>UNIPROTKB|G5E9G9 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889 EMBL:CH471058
UniGene:Hs.434479 HGNC:HGNC:1955 EMBL:AC018890
ProteinModelPortal:G5E9G9 SMR:G5E9G9 Ensembl:ENST00000409323
ArrayExpress:G5E9G9 Bgee:G5E9G9 Uniprot:G5E9G9
Length = 269
Score = 202 (76.2 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 64 DLSEFYMSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
DLS F S EW I E ++ Y+CC D PYLDIT++ M+R L++ VN+IIPC+
Sbjct: 186 DLSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLF 245
Query: 123 SFLTVLTFYLPSDSG 137
SFLT L FYLP+DSG
Sbjct: 246 SFLTGLVFYLPTDSG 260
>WB|WBGene00000955 [details] [associations]
symbol:des-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0005887 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 KO:K05312
EMBL:Z74039 EMBL:Z74044 UniGene:Cel.19736 GeneID:179574
KEGG:cel:CELE_T26H10.1 CTD:179574 RefSeq:NP_001256321.1
ProteinModelPortal:H9G2Y4 SMR:H9G2Y4 WormBase:T26H10.1b
Uniprot:H9G2Y4
Length = 559
Score = 220 (82.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 48/152 (31%), Positives = 86/152 (56%)
Query: 59 ERVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIP 118
+++G S + + W IL+ R E Y CC Y + + +RRK LFY VN+IIP
Sbjct: 191 DKIGT--SNYLENEGWYILQTKIKRQEVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIP 248
Query: 119 CMGISFLTVLTFYLPSD-SG---EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKY 174
I+ + ++ F+ S SG EKV+L I+ L+S+ + L+V + +P TS +PL+G +
Sbjct: 249 TSIITLIAIVGFFTTSSASGMREEKVSLGITTLLSMSILMLMVSDQMPTTSTFIPLIGWF 308
Query: 175 LIFAMILVSISICVTVVVLNVHFRSPQTHKMA 206
++ +I++S+ V+ V++ + R +M+
Sbjct: 309 ILAMIIVISLGTVVSSVIIAIQKRGSLGERMS 340
>WB|WBGene00000044 [details] [associations]
symbol:acr-5 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00570000078866 KO:K05312
HOGENOM:HOG000019549 EMBL:FO080466 PIR:T16546 RefSeq:NP_498437.2
UniGene:Cel.10980 ProteinModelPortal:P54246 SMR:P54246
STRING:P54246 EnsemblMetazoa:K03F8.2 GeneID:191596
KEGG:cel:CELE_K03F8.2 UCSC:K03F8.2 CTD:191596 WormBase:K03F8.2
eggNOG:NOG300124 InParanoid:P54246 OMA:MARNDEW NextBio:949612
Uniprot:P54246
Length = 598
Score = 207 (77.9 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 42/168 (25%), Positives = 89/168 (52%)
Query: 63 VDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGI 122
V+L + EW+++ VR E+ + CC P++ + ++ +RRK L+Y +N+++P I
Sbjct: 276 VNLGNMARNDEWEVISFEFVRVEETFKCCTAPWVMLYAHLVIRRKPLYYMINLVVPTSII 335
Query: 123 SFLTVLTFYLPSDSG----EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFA 178
+ + V F+ P+ S EK+ L I+ L+++ V L+V +P TS VPL+ Y I
Sbjct: 336 TIVAVTGFFTPTSSSSERDEKLYLGINTLLTMSVMMLMVCNQMPSTSTYVPLMSWYYIGI 395
Query: 179 MILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIQFLPRILVMRRP 226
++++ + + VL +H + ++ ++++ + ++ P
Sbjct: 396 IMVIVVGTFLATGVLAIHGQKHYNKPISDRIRKLIYNPVVEFFILSPP 443
Score = 52 (23.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 322 DWKYVALVLDRLFLWIF 338
+W+++A VLDR+ L IF
Sbjct: 553 EWEFLANVLDRILLTIF 569
WARNING: HSPs involving 47 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 383 383 0.00091 117 3 11 22 0.46 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 297
No. of states in DFA: 618 (66 KB)
Total size of DFA: 260 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.68u 0.09s 34.77t Elapsed: 00:00:20
Total cpu time: 34.74u 0.09s 34.83t Elapsed: 00:00:22
Start: Thu Aug 15 10:57:10 2013 End: Thu Aug 15 10:57:32 2013
WARNINGS ISSUED: 2