BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16244
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P91766|ACH1_MANSE Acetylcholine receptor subunit alpha-like OS=Manduca sexta GN=ARA1
PE=2 SV=1
Length = 516
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Query: 15 TLLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRP 74
T+ ++L+ + L+ NLKNQIMTTNLWVEQSWYDYKL WEP+EYGGV MLHVPSDHIWRP
Sbjct: 51 TVRIKLKLSQLIDV-NLKNQIMTTNLWVEQSWYDYKLSWEPREYGGVEMLHVPSDHIWRP 109
Query: 75 DIVLYN 80
DIVLYN
Sbjct: 110 DIVLYN 115
>sp|P09478|ACH1_DROME Acetylcholine receptor subunit alpha-like 1 OS=Drosophila
melanogaster GN=nAcRalpha-96Aa PE=2 SV=2
Length = 567
Score = 100 bits (248), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Query: 4 NRVLKLLQNHE---TLLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 60
NR+++ + N+ T+ + LR + L+ NLKNQIMTTN+WVEQ W DYKL+W P +YGG
Sbjct: 37 NRLIRPVGNNSDRLTVKMGLRLSQLIDV-NLKNQIMTTNVWVEQEWNDYKLKWNPDDYGG 95
Query: 61 VHMLHVPSDHIWRPDIVLYN 80
V LHVPS+HIW PDIVLYN
Sbjct: 96 VDTLHVPSEHIWLPDIVLYN 115
>sp|P25162|ACH4_DROME Acetylcholine receptor subunit beta-like 2 OS=Drosophila
melanogaster GN=nAcRbeta-96A PE=2 SV=3
Length = 519
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 4/80 (5%)
Query: 4 NRVLK-LLQNHETLLV--ELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 60
NR+++ ++ N ETL V L+ + L+ NLKNQ+MTTNLWV+Q W+DYKLRW+P+EYGG
Sbjct: 42 NRLIRPVVNNTETLTVWLGLKLSQLI-EVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGG 100
Query: 61 VHMLHVPSDHIWRPDIVLYN 80
V L+VPS+HIW PDIVLYN
Sbjct: 101 VEQLYVPSEHIWVPDIVLYN 120
>sp|Q9N587|ACH6_CAEEL Acetylcholine receptor subunit alpha-type unc-63 OS=Caenorhabditis
elegans GN=unc-63 PE=1 SV=2
Length = 502
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
Query: 11 QNHETLLV--ELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPS 68
+N ETL+V +L+ + LL H KNQIMTTN+W++ SW DYKLRW+P EYGGV +L+VPS
Sbjct: 47 ENGETLVVTFKLKLSQLLDVHE-KNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPS 105
Query: 69 DHIWRPDIVLYN 80
D IW PD+VLYN
Sbjct: 106 DTIWLPDVVLYN 117
>sp|P23414|ACH1_SCHGR Acetylcholine receptor subunit alpha-L1 OS=Schistocerca gregaria
PE=2 SV=1
Length = 557
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Query: 4 NRVLKLLQNH-ETLLVEL--RTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 60
NR+++ + N+ +T+LV+L R + L+ NLK+QI+TTN+W+E W D+K RW+P EYGG
Sbjct: 39 NRLIRPVSNNTDTVLVKLGLRLSQLIDL-NLKDQILTTNVWLEHEWQDHKFRWDPAEYGG 97
Query: 61 VHMLHVPSDHIWRPDIVLYN 80
V L+VPS+HIW PDIVLYN
Sbjct: 98 VTELYVPSEHIWLPDIVLYN 117
>sp|P17644|ACH2_DROME Acetylcholine receptor subunit alpha-like 2 OS=Drosophila
melanogaster GN=nAcRalpha-96Ab PE=2 SV=1
Length = 576
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Query: 4 NRVLKLLQNH-ETLLVEL--RTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 60
NR+++ + N+ +T+LV+L R + L+ NLK+QI+TTN+W+E W D+K +W+P EYGG
Sbjct: 57 NRLIRPVSNNTDTVLVKLGLRLSQLIDL-NLKDQILTTNVWLEHEWQDHKFKWDPSEYGG 115
Query: 61 VHMLHVPSDHIWRPDIVLYN 80
V L+VPS+HIW PDIVLYN
Sbjct: 116 VTELYVPSEHIWLPDIVLYN 135
>sp|Q19AE6|ACHA4_MUSPF Neuronal acetylcholine receptor subunit alpha-4 OS=Mustela putorius
furo GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+WV+Q WYDYKLRW+P +Y V + +PS+ IWRPDIVLYN
Sbjct: 81 KNQMMTTNVWVKQEWYDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 129
>sp|O70174|ACHA4_MOUSE Neuronal acetylcholine receptor subunit alpha-4 OS=Mus musculus
GN=Chrna4 PE=2 SV=2
Length = 629
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+WV+Q W+DYKLRW+P +Y V + +PS+ IWRPDIVLYN
Sbjct: 81 KNQMMTTNVWVKQEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYN 129
>sp|P43681|ACHA4_HUMAN Neuronal acetylcholine receptor subunit alpha-4 OS=Homo sapiens
GN=CHRNA4 PE=1 SV=2
Length = 627
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+WV+Q W+DYKLRW+P +Y V + +PS+ IWRPDIVLYN
Sbjct: 79 KNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>sp|P09483|ACHA4_RAT Neuronal acetylcholine receptor subunit alpha-4 OS=Rattus
norvegicus GN=Chrna4 PE=1 SV=3
Length = 630
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+WV+Q W+DYKLRW+P +Y V + +PS+ IWRPDIVLYN
Sbjct: 81 KNQMMTTNVWVKQEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYN 129
>sp|Q5IS77|ACHA4_PANTR Neuronal acetylcholine receptor subunit alpha-4 OS=Pan troglodytes
GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+WV+Q W+DYKLRW+P +Y V + +PS+ IWRPDIVLYN
Sbjct: 79 KNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit alpha-4 OS=Gallus gallus
GN=CHRNA4 PE=1 SV=1
Length = 622
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+WV+Q W+DYKLRW+P+EY V + +PS+ IWRPDIVLYN
Sbjct: 74 KNQMMTTNVWVKQEWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVLYN 122
>sp|P09481|ACHA3_CHICK Neuronal acetylcholine receptor subunit alpha-3 OS=Gallus gallus
GN=CHRNA3 PE=2 SV=2
Length = 496
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 36/48 (75%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQIM TNLW++ W DYKLRW P +YGG + VPS IW+PDIVLYN
Sbjct: 69 NQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYN 116
>sp|P32297|ACHA3_HUMAN Neuronal acetylcholine receptor subunit alpha-3 OS=Homo sapiens
GN=CHRNA3 PE=1 SV=4
Length = 505
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQIM TNLW++Q W DYKL+W P +YGG + VP+ IW+PDIVLYN
Sbjct: 78 NQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>sp|Q9R0W9|ACHA6_MOUSE Neuronal acetylcholine receptor subunit alpha-6 OS=Mus musculus
GN=Chrna6 PE=2 SV=2
Length = 494
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 4 NRVLKLLQN-HETLLVELRTA-TLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGV 61
NR ++ ++N + + V A T L+ + NQIM TNLW+ W DY+LRW+P EY G+
Sbjct: 46 NRFIRPVENVSDPVTVHFELAITQLANVDEVNQIMETNLWLRHIWKDYRLRWDPTEYDGI 105
Query: 62 HMLHVPSDHIWRPDIVLYN 80
L VP+D+IW+PDIVLYN
Sbjct: 106 ETLRVPADNIWKPDIVLYN 124
>sp|P04757|ACHA3_RAT Neuronal acetylcholine receptor subunit alpha-3 OS=Rattus
norvegicus GN=Chrna3 PE=2 SV=1
Length = 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQIM TNLW++Q W DYKL+W+P +Y GV + VP++ IW+PDIVLYN
Sbjct: 72 NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYN 119
>sp|Q8R4G9|ACHA3_MOUSE Neuronal acetylcholine receptor subunit alpha-3 OS=Mus musculus
GN=Chrna3 PE=2 SV=1
Length = 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQIM TNLW++Q W DYKL+W+P +Y GV + VP++ IW+PDIVLYN
Sbjct: 72 NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYN 119
>sp|P30532|ACHA5_HUMAN Neuronal acetylcholine receptor subunit alpha-5 OS=Homo sapiens
GN=CHRNA5 PE=2 SV=2
Length = 468
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W D KLRW P +YGG+ ++ VPSD +W PDIVL++
Sbjct: 89 KNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>sp|P26153|ACHB4_CHICK Neuronal acetylcholine receptor subunit beta-4 (Fragment)
OS=Gallus gallus GN=CHRNB4 PE=2 SV=1
Length = 470
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 4 NRVLKLLQNHETLL-VELRT--ATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 60
N++++ N L+ +EL+ A L+S N + QIMTTN+W+ Q W DY+L W+P +Y G
Sbjct: 21 NKLIRPAVNSSQLVSIELQVSLAQLISV-NEREQIMTTNVWLNQEWIDYRLAWKPSDYEG 79
Query: 61 VHMLHVPSDHIWRPDIVLYN 80
++ML +P+ HIW PDIVLYN
Sbjct: 80 INMLRIPAKHIWLPDIVLYN 99
>sp|Q5IS51|ACHA5_PANTR Neuronal acetylcholine receptor subunit alpha-5 OS=Pan troglodytes
GN=CHRNA5 PE=2 SV=1
Length = 468
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W D KLRW P +YGG+ ++ VPSD +W PDIVL++
Sbjct: 89 KNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>sp|Q8SPU7|ACHA5_BOVIN Neuronal acetylcholine receptor subunit alpha-5 OS=Bos taurus
GN=CHRNA5 PE=2 SV=1
Length = 475
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W D KLRW P +YGG+ ++ VPSD +W PDIVL++
Sbjct: 96 KNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKLIRVPSDSLWTPDIVLFD 144
>sp|P12389|ACHA2_RAT Neuronal acetylcholine receptor subunit alpha-2 OS=Rattus
norvegicus GN=Chrna2 PE=2 SV=2
Length = 511
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 2 GQNRVLKLLQNHETLLV---ELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEY 58
G NR + + N +++ L A L+ KNQ+MTTN+W++Q W DYKLRW+P E+
Sbjct: 46 GYNRWARPVPNTSDVVIVRFGLSIAQLIDVDE-KNQMMTTNVWLKQEWNDYKLRWDPAEF 104
Query: 59 GGVHMLHVPSDHIWRPDIVLYN 80
G V L VPS+ IW PDIVLYN
Sbjct: 105 GNVTSLRVPSEMIWIPDIVLYN 126
>sp|Q15825|ACHA6_HUMAN Neuronal acetylcholine receptor subunit alpha-6 OS=Homo sapiens
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 4 NRVLKLLQN-HETLLVELRTA-TLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGV 61
N+ ++ ++N + + V A T L+ + NQIM TNLW+ W DYKLRW+P EY G+
Sbjct: 46 NQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGI 105
Query: 62 HMLHVPSDHIWRPDIVLYN 80
L VP+D IW+PDIVLYN
Sbjct: 106 ETLRVPADKIWKPDIVLYN 124
>sp|P18845|ACHA3_CARAU Neuronal acetylcholine receptor subunit alpha-3 OS=Carassius
auratus GN=chrna3 PE=2 SV=1
Length = 512
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQIM TNLW+ W DYKL+W P E+ G+ + VPS+ IWRPDIVLYN
Sbjct: 70 NQIMETNLWLRHIWNDYKLKWLPAEFDGIEFIRVPSNKIWRPDIVLYN 117
>sp|Q91X60|ACHA2_MOUSE Neuronal acetylcholine receptor subunit alpha-2 OS=Mus musculus
GN=Chrna2 PE=2 SV=1
Length = 512
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 2 GQNRVLKLLQNHETLLV---ELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEY 58
G NR + + N +++ L A L+ KNQ+MTTN+W++Q W DYKLRW+P E+
Sbjct: 46 GYNRWARPVPNTSDVVIVRFGLSIAQLIDVDE-KNQMMTTNVWLKQEWNDYKLRWDPAEF 104
Query: 59 GGVHMLHVPSDHIWRPDIVLYN 80
G + L VPS+ IW PDIVLYN
Sbjct: 105 GNITSLRVPSEMIWIPDIVLYN 126
>sp|Q15822|ACHA2_HUMAN Neuronal acetylcholine receptor subunit alpha-2 OS=Homo sapiens
GN=CHRNA2 PE=1 SV=2
Length = 529
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W DYKLRW P ++G + L VPS+ IW PDIVLYN
Sbjct: 101 KNQMMTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYN 149
>sp|Q5IS76|ACHA6_PANTR Neuronal acetylcholine receptor subunit alpha-6 OS=Pan troglodytes
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 4 NRVLKLLQN-HETLLVELRTA-TLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGV 61
N+ ++ ++N + + V A T L+ + NQIM TNLW+ W DYKLRW+P EY G+
Sbjct: 46 NQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGI 105
Query: 62 HMLHVPSDHIWRPDIVLYN 80
L +P+D IW+PDIVLYN
Sbjct: 106 ETLRIPADKIWKPDIVLYN 124
>sp|Q5IS52|ACHA2_PANTR Neuronal acetylcholine receptor subunit alpha-2 OS=Pan troglodytes
GN=CHRNA2 PE=2 SV=1
Length = 529
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W DYKLRW P ++G + L VPS+ IW PDIVLYN
Sbjct: 101 KNQMMTTNVWLKQEWSDYKLRWNPADFGNITSLRVPSEMIWIPDIVLYN 149
>sp|P13536|ACHG_BOVIN Acetylcholine receptor subunit gamma OS=Bos taurus GN=CHRNG PE=2
SV=1
Length = 519
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 22 TATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
T T L N + + +TTN+W+E W DY+LRW+P++YGG+ +L VPS +WRPDIVL N
Sbjct: 58 TLTNLISLNEREEALTTNVWIEMQWCDYRLRWDPRDYGGLWVLRVPSTMVWRPDIVLEN 116
>sp|Q07263|ACHA3_BOVIN Neuronal acetylcholine receptor subunit alpha-3 OS=Bos taurus
GN=CHRNA3 PE=2 SV=1
Length = 495
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQIM TNLW++Q W DYKL+W P +Y G + VP++ IW+PDIVLYN
Sbjct: 68 NQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYN 115
>sp|P20420|ACHA5_RAT Neuronal acetylcholine receptor subunit alpha-5 OS=Rattus
norvegicus GN=Chrna5 PE=2 SV=1
Length = 452
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W D KLRW P +YGG+ ++ VPSD +W PDIVL++
Sbjct: 74 KNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFD 122
>sp|P19370|ACHB2_CARAU Neuronal acetylcholine receptor subunit beta-2 (Fragment)
OS=Carassius auratus GN=chrnb2 PE=2 SV=1
Length = 459
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 1 MGQNRVLKLLQ------NHETLLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWE 54
+G R KL++ T+ +++ A L+S N + QIMTTN+W+ Q W DY+L W+
Sbjct: 7 LGPERYNKLIRPAVNKSQQVTIGIKVSLAQLISV-NEREQIMTTNVWLTQEWTDYRLVWD 65
Query: 55 PKEYGGVHMLHVPSDHIWRPDIVLYN 80
P EY G+ L +PS HIW PDIVLYN
Sbjct: 66 PNEYEGIKKLRIPSQHIWLPDIVLYN 91
>sp|Q2MKA5|ACHA5_MOUSE Neuronal acetylcholine receptor subunit alpha-5 OS=Mus musculus
GN=Chrna5 PE=2 SV=1
Length = 467
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W D KLRW P +YGG+ ++ VPSD +W PDIVL++
Sbjct: 89 KNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFD 137
>sp|P43143|ACHA6_RAT Neuronal acetylcholine receptor subunit alpha-6 OS=Rattus
norvegicus GN=Chrna6 PE=2 SV=1
Length = 493
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 4 NRVLKLLQN-HETLLVELRTA-TLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGV 61
NR ++ ++N + + V A T L+ + NQIM TNLW+ W DY+L W+P EY G+
Sbjct: 46 NRFIRPVENVSDPVTVHFELAITQLANVDEVNQIMETNLWLRHVWKDYRLCWDPTEYDGI 105
Query: 62 HMLHVPSDHIWRPDIVLYN 80
L VP+D+IW+PDIVLYN
Sbjct: 106 ETLRVPADNIWKPDIVLYN 124
>sp|Q5IS75|ACHB3_PANTR Neuronal acetylcholine receptor subunit beta-3 OS=Pan troglodytes
GN=CHRNB3 PE=2 SV=1
Length = 458
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLY 79
KNQ+MTTN+W++Q W D+KLRW P +YGG+H + VPS+ +W PDIVL+
Sbjct: 71 KNQLMTTNVWLKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLF 118
>sp|Q05901|ACHB3_HUMAN Neuronal acetylcholine receptor subunit beta-3 OS=Homo sapiens
GN=CHRNB3 PE=2 SV=2
Length = 458
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLY 79
KNQ+MTTN+W++Q W D+KLRW P +YGG+H + VPS+ +W PDIVL+
Sbjct: 71 KNQLMTTNVWLKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLF 118
>sp|P17787|ACHB2_HUMAN Neuronal acetylcholine receptor subunit beta-2 OS=Homo sapiens
GN=CHRNB2 PE=1 SV=1
Length = 502
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 16 LLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPD 75
L+V L A L+S H + QIMTTN+W+ Q W DY+L W+P+E+ + + +PS HIW PD
Sbjct: 60 LMVSL--AQLISVHE-REQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPD 116
Query: 76 IVLYN 80
+VLYN
Sbjct: 117 VVLYN 121
>sp|P02709|ACHA_BOVIN Acetylcholine receptor subunit alpha OS=Bos taurus GN=CHRNA1 PE=2
SV=1
Length = 457
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 4 NRVLKLLQNHETLL---VELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 60
N V++ +++H + V L+ L++ + NQI+TTN+ ++Q W DY L+W P +YGG
Sbjct: 36 NSVVRPVEDHRQAVEVTVGLQLIQLINVDEV-NQIVTTNVRLKQQWVDYNLKWNPDDYGG 94
Query: 61 VHMLHVPSDHIWRPDIVLYN 80
V +H+PS+ IWRPD+VLYN
Sbjct: 95 VKKIHIPSEKIWRPDLVLYN 114
>sp|P25108|ACHA_RAT Acetylcholine receptor subunit alpha OS=Rattus norvegicus GN=Chrna1
PE=2 SV=1
Length = 457
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQI+TTN+ ++Q W DY L+W P +YGGV +H+PS+ IWRPD+VLYN
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYN 114
>sp|P04756|ACHA_MOUSE Acetylcholine receptor subunit alpha OS=Mus musculus GN=Chrna1 PE=1
SV=1
Length = 457
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 33 NQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
NQI+TTN+ ++Q W DY L+W P +YGGV +H+PS+ IWRPD+VLYN
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYN 114
>sp|P04760|ACHG_MOUSE Acetylcholine receptor subunit gamma OS=Mus musculus GN=Chrng PE=2
SV=1
Length = 519
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 22 TATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
T T L N + + +TTN+W+E W DY+LRW+PK+Y G+ +L VPS +WRPDIVL N
Sbjct: 58 TLTNLISLNEREEALTTNVWIEMQWCDYRLRWDPKDYEGLWILRVPSTMVWRPDIVLEN 116
>sp|P09480|ACHA2_CHICK Neuronal acetylcholine receptor subunit alpha-2 OS=Gallus gallus
GN=CHRNA2 PE=2 SV=1
Length = 528
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 39/49 (79%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 80
KNQ+MTTN+W++Q W DYKLRW P+++ V + VPS+ IW PDIVLYN
Sbjct: 76 KNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYN 124
>sp|Q8BMN3|ACHB3_MOUSE Neuronal acetylcholine receptor subunit beta-3 OS=Mus musculus
GN=Chrnb3 PE=2 SV=1
Length = 464
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLY 79
KNQ+MTTN+W++Q W D KLRW P++YGG++ + VPS+ +W PDIVL+
Sbjct: 77 KNQLMTTNVWLKQEWTDQKLRWNPEDYGGINSIKVPSESLWLPDIVLF 124
>sp|Q9GZZ6|ACH10_HUMAN Neuronal acetylcholine receptor subunit alpha-10 OS=Homo sapiens
GN=CHRNA10 PE=1 SV=1
Length = 450
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNK 81
+NQ++T LW+ Q W D LRW+P YGG+ + +PS +WRPDIVLYNK
Sbjct: 72 RNQVLTLYLWIRQEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVLYNK 121
>sp|P12391|ACHB3_RAT Neuronal acetylcholine receptor subunit beta-3 OS=Rattus norvegicus
GN=Chrnb3 PE=2 SV=1
Length = 464
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLY 79
KNQ+MTTN+W++Q W D KLRW P+EYGG++ + VPS+ +W PDIVL+
Sbjct: 77 KNQLMTTNVWLKQEWTDQKLRWNPEEYGGINSIKVPSESLWLPDIVLF 124
>sp|P13908|ACHN2_CARAU Neuronal acetylcholine receptor subunit non-alpha-2 OS=Carassius
auratus PE=2 SV=1
Length = 462
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 32 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLY 79
KNQ+MTTN+W+ Q W DYKLRW P+ YGG+ + VPS+ IW PDIVLY
Sbjct: 73 KNQLMTTNVWLWQEWLDYKLRWNPENYGGITSIRVPSESIWLPDIVLY 120
>sp|P09479|ACHA_CHICK Acetylcholine receptor subunit alpha OS=Gallus gallus GN=CHRNA1
PE=1 SV=1
Length = 456
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 4 NRVLKLLQNHETLLVELRTATLLSRHNLK--NQIMTTNLWVEQSWYDYKLRWEPKEYGGV 61
++V++ ++NH +V L+ N+ NQI+TTN+ ++Q W D L+W P +YGGV
Sbjct: 35 SKVVRPVENHRDAVVVTVGLQLIQLINVDEVNQIVTTNVRLKQQWTDINLKWNPDDYGGV 94
Query: 62 HMLHVPSDHIWRPDIVLYN 80
+ +PSD IWRPD+VLYN
Sbjct: 95 KQIRIPSDDIWRPDLVLYN 113
>sp|Q8SPU6|ACHB4_BOVIN Neuronal acetylcholine receptor subunit beta-4 OS=Bos taurus
GN=CHRNB4 PE=2 SV=1
Length = 496
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 15 TLLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRP 74
++ ++L A L+S N + QIMTTN+W++Q W DY+L W Y GV++L +P++ +W P
Sbjct: 55 SIQLQLSLAQLISV-NEREQIMTTNIWLKQEWTDYRLAWNSSRYEGVNILRIPANRVWLP 113
Query: 75 DIVLYN 80
DIVLYN
Sbjct: 114 DIVLYN 119
>sp|Q9ERK7|ACHB2_MOUSE Neuronal acetylcholine receptor subunit beta-2 OS=Mus musculus
GN=Chrnb2 PE=2 SV=1
Length = 501
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 16 LLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPD 75
L+V L A L+S H + QIMTTN+W+ Q W DY+L W+P+++ + + +PS HIW PD
Sbjct: 60 LMVSL--AQLISVHE-REQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPD 116
Query: 76 IVLYN 80
+VLYN
Sbjct: 117 VVLYN 121
>sp|P12390|ACHB2_RAT Neuronal acetylcholine receptor subunit beta-2 OS=Rattus norvegicus
GN=Chrnb2 PE=2 SV=2
Length = 500
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 16 LLVELRTATLLSRHNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPD 75
L+V L A L+S H + QIMTTN+W+ Q W DY+L W+P+++ + + +PS HIW PD
Sbjct: 59 LMVSL--AQLISVHE-REQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPD 115
Query: 76 IVLYN 80
+VLYN
Sbjct: 116 VVLYN 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,470,776
Number of Sequences: 539616
Number of extensions: 1136452
Number of successful extensions: 2656
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2525
Number of HSP's gapped (non-prelim): 131
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)