BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16246
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P91766|ACH1_MANSE Acetylcholine receptor subunit alpha-like OS=Manduca sexta GN=ARA1
PE=2 SV=1
Length = 516
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 59/62 (95%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADGNFEVTLATKAT+ Y G VEW+PPAIYKSSCEIDVEYFPFD+QTCV+KFGSWTYDGF
Sbjct: 116 NADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDQQTCVMKFGSWTYDGF 175
Query: 110 KV 111
+V
Sbjct: 176 QV 177
>sp|P09478|ACH1_DROME Acetylcholine receptor subunit alpha-like 1 OS=Drosophila
melanogaster GN=nAcRalpha-96Aa PE=2 SV=2
Length = 567
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 54/62 (87%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADGN+EVT+ TKA +++ G V WKPPAIYKS CEIDVEYFPFDEQTC +KFGSWTYDG+
Sbjct: 116 NADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGY 175
Query: 110 KV 111
V
Sbjct: 176 MV 177
>sp|P17644|ACH2_DROME Acetylcholine receptor subunit alpha-like 2 OS=Drosophila
melanogaster GN=nAcRalpha-96Ab PE=2 SV=1
Length = 576
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
NADG + VT TKA ++Y G V W PPAI+KSSCEIDV YFPFD+QTC +KFGSWTYDG
Sbjct: 136 NADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDG 194
>sp|P25162|ACH4_DROME Acetylcholine receptor subunit beta-like 2 OS=Drosophila
melanogaster GN=nAcRbeta-96A PE=2 SV=3
Length = 519
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
N DGN+EVTL TKAT+ Y G V W+PPAIYKSSCE++VEYFP+DEQ C +KFGSWTY+G
Sbjct: 121 NWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGA 180
Query: 110 KV 111
+V
Sbjct: 181 QV 182
>sp|Q9N587|ACH6_CAEEL Acetylcholine receptor subunit alpha-type unc-63 OS=Caenorhabditis
elegans GN=unc-63 PE=1 SV=2
Length = 502
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADGN++VT+ TKA + Y G VEW PPAIYKS C+IDVE+FPFD Q C +KFGSWTY G
Sbjct: 118 NADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGGL 177
Query: 110 KV 111
+V
Sbjct: 178 EV 179
>sp|O70174|ACHA4_MOUSE Neuronal acetylcholine receptor subunit alpha-4 OS=Mus musculus
GN=Chrna4 PE=2 SV=2
Length = 629
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F VT TKA ++Y G V+W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 130 NADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKA 189
Query: 110 KV 111
K+
Sbjct: 190 KI 191
>sp|P09483|ACHA4_RAT Neuronal acetylcholine receptor subunit alpha-4 OS=Rattus
norvegicus GN=Chrna4 PE=1 SV=3
Length = 630
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F VT TKA ++Y G V+W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 130 NADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKA 189
Query: 110 KV 111
K+
Sbjct: 190 KI 191
>sp|P23414|ACH1_SCHGR Acetylcholine receptor subunit alpha-L1 OS=Schistocerca gregaria
PE=2 SV=1
Length = 557
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 48/59 (81%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
NADG + VT TKA +++ G V W PPAI+KSSCEIDV YFPFD+QTC +KFGSWTYDG
Sbjct: 118 NADGEYVVTTMTKAVLHHTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDG 176
>sp|Q5IS77|ACHA4_PANTR Neuronal acetylcholine receptor subunit alpha-4 OS=Pan troglodytes
GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F VT TKA +++ G V+W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 128 NADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKA 187
Query: 110 KV 111
K+
Sbjct: 188 KI 189
>sp|P43681|ACHA4_HUMAN Neuronal acetylcholine receptor subunit alpha-4 OS=Homo sapiens
GN=CHRNA4 PE=1 SV=2
Length = 627
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F VT TKA +++ G V+W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 128 NADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKA 187
Query: 110 KV 111
K+
Sbjct: 188 KI 189
>sp|Q19AE6|ACHA4_MUSPF Neuronal acetylcholine receptor subunit alpha-4 OS=Mustela putorius
furo GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F +T TKA +++ G V+W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 130 NADGDFAITHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKA 189
Query: 110 KV 111
K+
Sbjct: 190 KI 191
>sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit alpha-4 OS=Gallus gallus
GN=CHRNA4 PE=1 SV=1
Length = 622
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F VT TKA ++Y G ++W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 123 NADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKA 182
Query: 110 KV 111
K+
Sbjct: 183 KI 184
>sp|P13908|ACHN2_CARAU Neuronal acetylcholine receptor subunit non-alpha-2 OS=Carassius
auratus PE=2 SV=1
Length = 462
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TKA + Y G++ W PPA YKS+C +DV +FPFD Q C +KFGSWTYDG
Sbjct: 121 ENADGRFEGSLMTKAIVRYNGMITWTPPASYKSACTMDVTFFPFDRQNCSMKFGSWTYDG 180
>sp|P12389|ACHA2_RAT Neuronal acetylcholine receptor subunit alpha-2 OS=Rattus
norvegicus GN=Chrna2 PE=2 SV=2
Length = 511
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG F VT TKA +++ G V W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 127 NADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKA 186
Query: 110 KV 111
K+
Sbjct: 187 KI 188
>sp|Q91X60|ACHA2_MOUSE Neuronal acetylcholine receptor subunit alpha-2 OS=Mus musculus
GN=Chrna2 PE=2 SV=1
Length = 512
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG F VT TKA +++ G V W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 127 NADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKA 186
Query: 110 KV 111
K+
Sbjct: 187 KI 188
>sp|P04755|ACH3_DROME Acetylcholine receptor subunit beta-like 1 OS=Drosophila
melanogaster GN=nAcRbeta-64B PE=2 SV=1
Length = 521
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 46/59 (77%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
NADGN+EV + IY G V W PPAIY+SSC IDV YFPFD+QTC++KFGSWT++G
Sbjct: 119 NADGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNG 177
>sp|P18257|ACHN3_CARAU Neuronal acetylcholine receptor subunit non-alpha-3 OS=Carassius
auratus PE=2 SV=1
Length = 466
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 46/63 (73%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TKA + + G + W PPA YKSSC +DV +FPFD Q C +KFGSWTYDG
Sbjct: 122 ENADGRFEGSLMTKAIVRFNGTIMWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDG 181
Query: 109 FKV 111
V
Sbjct: 182 TMV 184
>sp|P43679|ACHB3_CHICK Neuronal acetylcholine receptor subunit beta-3 OS=Gallus gallus
GN=CHRNB3 PE=2 SV=2
Length = 455
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 47/60 (78%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TKA + Y G+V+W PPA YKSSC +++ +FPFD Q C +KFGSWTYDG
Sbjct: 116 ENADGRFEGSLMTKAIVKYNGVVQWMPPASYKSSCTMELTFFPFDRQNCSMKFGSWTYDG 175
>sp|Q23022|ACH5_CAEEL Acetylcholine receptor subunit alpha-type unc-38 OS=Caenorhabditis
elegans GN=unc-38 PE=2 SV=1
Length = 511
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTY 106
NAD N+ +T++TKAT++Y G V W+PPAI+KS C+IDV +FPFDEQ C LKFGSWT+
Sbjct: 118 NADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVRWFPFDEQQCHLKFGSWTF 174
>sp|Q15822|ACHA2_HUMAN Neuronal acetylcholine receptor subunit alpha-2 OS=Homo sapiens
GN=CHRNA2 PE=1 SV=2
Length = 529
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 46/62 (74%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG F VT TKA ++ G V W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 150 NADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKA 209
Query: 110 KV 111
K+
Sbjct: 210 KI 211
>sp|Q5IS52|ACHA2_PANTR Neuronal acetylcholine receptor subunit alpha-2 OS=Pan troglodytes
GN=CHRNA2 PE=2 SV=1
Length = 529
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 46/62 (74%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG F VT TKA ++ G V W PPAIYKSSC IDV +FPFD+Q C +KFGSWTYD
Sbjct: 150 NADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKA 209
Query: 110 KV 111
K+
Sbjct: 210 KI 211
>sp|P12391|ACHB3_RAT Neuronal acetylcholine receptor subunit beta-3 OS=Rattus norvegicus
GN=Chrnb3 PE=2 SV=1
Length = 464
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 45/63 (71%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TKA + G V W PPA YKSSC +DV +FPFD Q C +KFGSWTYDG
Sbjct: 125 ENADGRFEGSLMTKAIVKSSGTVSWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDG 184
Query: 109 FKV 111
V
Sbjct: 185 TMV 187
>sp|P09480|ACHA2_CHICK Neuronal acetylcholine receptor subunit alpha-2 OS=Gallus gallus
GN=CHRNA2 PE=2 SV=1
Length = 528
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG F VT TKA ++ G V+W PPAIYKSSC IDV YFPFD+Q C +KFGSWTYD
Sbjct: 125 NADGEFAVTHMTKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKA 184
Query: 110 KV 111
K+
Sbjct: 185 KI 186
>sp|Q8BMN3|ACHB3_MOUSE Neuronal acetylcholine receptor subunit beta-3 OS=Mus musculus
GN=Chrnb3 PE=2 SV=1
Length = 464
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 46/63 (73%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TKA + G V W PPA YKSSC +DV +FPFD+Q C +KFGSWTYDG
Sbjct: 125 ENADGRFEGSLMTKAIVKSSGTVSWTPPASYKSSCTMDVTFFPFDKQNCSMKFGSWTYDG 184
Query: 109 FKV 111
V
Sbjct: 185 TMV 187
>sp|P48181|ACH2_CAEEL Acetylcholine receptor subunit beta-type unc-29 OS=Caenorhabditis
elegans GN=unc-29 PE=2 SV=2
Length = 493
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NADGN+EV+ I ++G + W PPAIYKSSC IDVE+FPFDEQ C L FGSWTY+
Sbjct: 122 NADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDEQVCTLVFGSWTYN 179
>sp|Q27218|ACH7_CAEEL Acetylcholine receptor subunit beta-type lev-1 OS=Caenorhabditis
elegans GN=lev-1 PE=1 SV=1
Length = 507
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 42/58 (72%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NADGN+EV+ I G V W PPAIYKSSC IDVE+FPFD+Q C L FGSWTY+
Sbjct: 130 NADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLTFGSWTYN 187
>sp|A8WQK3|ACH1_CAEBR Acetylcholine receptor subunit alpha-type acr-16 OS=Caenorhabditis
briggsae GN=acr-16 PE=3 SV=2
Length = 499
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
+ D NF+ T T +Y GLV W PP I+K SC+ID+++FPFDEQ C KFGSWTYDG+
Sbjct: 114 SVDTNFDSTYQTNMIVYSSGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGY 173
Query: 110 KV 111
K+
Sbjct: 174 KL 175
>sp|Q5IS51|ACHA5_PANTR Neuronal acetylcholine receptor subunit alpha-5 OS=Pan troglodytes
GN=CHRNA5 PE=2 SV=1
Length = 468
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
+NADG FE T +TK I Y G V W PPA YKSSC IDV +FPFD Q C +KFGSWTYDG
Sbjct: 137 DNADGRFEGT-STKTVIRYNGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG 195
Query: 109 FKV 111
+V
Sbjct: 196 SQV 198
>sp|P30532|ACHA5_HUMAN Neuronal acetylcholine receptor subunit alpha-5 OS=Homo sapiens
GN=CHRNA5 PE=2 SV=2
Length = 468
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
+NADG FE T +TK I Y G V W PPA YKSSC IDV +FPFD Q C +KFGSWTYDG
Sbjct: 137 DNADGRFEGT-STKTVIRYNGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG 195
Query: 109 FKV 111
+V
Sbjct: 196 SQV 198
>sp|P48180|ACH1_CAEEL Acetylcholine receptor subunit alpha-type acr-16 OS=Caenorhabditis
elegans GN=acr-16 PE=2 SV=1
Length = 498
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
+ D NF+ T T +Y GLV W PP I+K SC+ID+++FPFDEQ C KFGSWTYDG+
Sbjct: 114 SVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGY 173
Query: 110 KV 111
K+
Sbjct: 174 KL 175
>sp|Q5IS75|ACHB3_PANTR Neuronal acetylcholine receptor subunit beta-3 OS=Pan troglodytes
GN=CHRNB3 PE=2 SV=1
Length = 458
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 44/63 (69%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TK + G V W PPA YKSSC +DV +FPFD Q C +KFGSWTYDG
Sbjct: 119 ENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDG 178
Query: 109 FKV 111
V
Sbjct: 179 TMV 181
>sp|Q05901|ACHB3_HUMAN Neuronal acetylcholine receptor subunit beta-3 OS=Homo sapiens
GN=CHRNB3 PE=2 SV=2
Length = 458
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 44/63 (69%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
ENADG FE +L TK + G V W PPA YKSSC +DV +FPFD Q C +KFGSWTYDG
Sbjct: 119 ENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDG 178
Query: 109 FKV 111
V
Sbjct: 179 TMV 181
>sp|P49581|ACHA6_CHICK Neuronal acetylcholine receptor subunit alpha-6 OS=Gallus gallus
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NA G+F+V TKA + Y G++ W PPAI+KSSC +D+ +FPFD Q C LKFGSWTYD
Sbjct: 125 NAVGDFQVEGKTKALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKA 184
Query: 110 KVPGSVNGA 118
K+ + G+
Sbjct: 185 KIDLLIIGS 193
>sp|Q8R4G9|ACHA3_MOUSE Neuronal acetylcholine receptor subunit alpha-3 OS=Mus musculus
GN=Chrna3 PE=2 SV=1
Length = 499
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F+V TKA + Y G V W PPAI+KSSC+IDV YFPFD Q C +KFGSW+YD
Sbjct: 120 NADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKA 179
Query: 110 KVPGSVNGA 118
K+ + G+
Sbjct: 180 KIDLVLIGS 188
>sp|P04757|ACHA3_RAT Neuronal acetylcholine receptor subunit alpha-3 OS=Rattus
norvegicus GN=Chrna3 PE=2 SV=1
Length = 499
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F+V TKA + Y G V W PPAI+KSSC+IDV YFPFD Q C +KFGSW+YD
Sbjct: 120 NADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKA 179
Query: 110 KVPGSVNGA 118
K+ + G+
Sbjct: 180 KIDLVLIGS 188
>sp|P48182|ACR2_CAEEL Acetylcholine receptor subunit beta-type acr-2 OS=Caenorhabditis
elegans GN=acr-2 PE=2 SV=1
Length = 575
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
NADGN+EV+ + + + G V W PPA++KSSC IDVE+FPFDEQ C L FGSWTY+
Sbjct: 152 NADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDEQCCTLVFGSWTYNS 210
>sp|Q15825|ACHA6_HUMAN Neuronal acetylcholine receptor subunit alpha-6 OS=Homo sapiens
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NA G+F+V TKA + Y G++ W PPAI+KSSC +D+ +FPFD Q C LKFGSWTYD
Sbjct: 125 NAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYD 182
>sp|Q5IS76|ACHA6_PANTR Neuronal acetylcholine receptor subunit alpha-6 OS=Pan troglodytes
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NA G+F+V TKA + Y G++ W PPAI+KSSC +D+ +FPFD Q C LKFGSWTYD
Sbjct: 125 NAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYD 182
>sp|P26152|ACHA5_CHICK Neuronal acetylcholine receptor subunit alpha-5 OS=Gallus gallus
GN=CHRNA5 PE=2 SV=2
Length = 454
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
+NADG FE T +TK + Y G + W PP YKSSC IDV +FPFD Q C +KFGSWTYDG
Sbjct: 123 DNADGRFEGT-STKTVVKYDGTIAWTPPVNYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG 181
Query: 109 FKV 111
+V
Sbjct: 182 SQV 184
>sp|Q9R0W9|ACHA6_MOUSE Neuronal acetylcholine receptor subunit alpha-6 OS=Mus musculus
GN=Chrna6 PE=2 SV=2
Length = 494
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NA G+F+V TKA + Y G++ W PPAI+KSSC +D+ +FPFD Q C LKFGSWTYD
Sbjct: 125 NAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYD 182
>sp|P05377|ACHAB_XENLA Acetylcholine receptor subunit alpha-1-B OS=Xenopus laevis
GN=chrna1-b PE=2 SV=1
Length = 457
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
NADG+F ++ TK + Y G + W PPAI+KS CEI V YFPFD+Q C +KFG+WTYDG
Sbjct: 115 NADGDFAISKDTKILLEYTGKITWTPPAIFKSYCEIIVTYFPFDQQNCSMKFGTWTYDG 173
>sp|Q8SPU7|ACHA5_BOVIN Neuronal acetylcholine receptor subunit alpha-5 OS=Bos taurus
GN=CHRNA5 PE=2 SV=1
Length = 475
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 49 ENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
+NADG FE +TK + Y G V W PPA YKSSC IDV +FPFD Q C +KFGSWTYDG
Sbjct: 144 DNADGRFE-GASTKTVVRYDGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG 202
Query: 109 FKV 111
+V
Sbjct: 203 SQV 205
>sp|P26153|ACHB4_CHICK Neuronal acetylcholine receptor subunit beta-4 (Fragment) OS=Gallus
gallus GN=CHRNB4 PE=2 SV=1
Length = 470
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NADG +EV+L T A + G + W PPAIYKS+C+I+V++FPFD+Q C LKF SWTYD
Sbjct: 100 NADGTYEVSLYTNAIVQNNGSIRWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYD 157
>sp|P43143|ACHA6_RAT Neuronal acetylcholine receptor subunit alpha-6 OS=Rattus
norvegicus GN=Chrna6 PE=2 SV=1
Length = 493
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYD 107
NA G+F+V TKA + Y G++ W PPAI+KSSC +D+ +FPFD Q C LKFGSWTYD
Sbjct: 125 NAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYD 182
>sp|Q07263|ACHA3_BOVIN Neuronal acetylcholine receptor subunit alpha-3 OS=Bos taurus
GN=CHRNA3 PE=2 SV=1
Length = 495
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NA G+F+V TKA + Y G V W PPAI+KSSC+IDV YFPFD Q C +KFGSW+YD
Sbjct: 116 NAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKA 175
Query: 110 KVPGSVNGA 118
K+ + G+
Sbjct: 176 KIDLVLIGS 184
>sp|P02711|ACHA_TORMA Acetylcholine receptor subunit alpha OS=Torpedo marmorata GN=CHRNA1
PE=1 SV=1
Length = 461
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F + TK + Y G + W PPAI+KS CEI V +FPFD+Q C +K G WTYDG
Sbjct: 119 NADGDFAIVHMTKLLLDYTGKIMWTPPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGT 178
Query: 110 KVPGS 114
KV S
Sbjct: 179 KVSIS 183
>sp|P02708|ACHA_HUMAN Acetylcholine receptor subunit alpha OS=Homo sapiens GN=CHRNA1 PE=1
SV=2
Length = 482
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDG 108
NADG+F + TK + Y G + W PPAI+KS CEI V +FPFDEQ C +K G+WTYDG
Sbjct: 140 NADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDG 198
>sp|P32297|ACHA3_HUMAN Neuronal acetylcholine receptor subunit alpha-3 OS=Homo sapiens
GN=CHRNA3 PE=1 SV=4
Length = 505
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NA G+F+V TKA + Y G V W PPAI+KSSC+IDV YFPFD Q C +KFGSW+YD
Sbjct: 126 NAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKA 185
Query: 110 KVPGSVNGA 118
K+ + G+
Sbjct: 186 KIDLVLIGS 194
>sp|P02710|ACHA_TORCA Acetylcholine receptor subunit alpha OS=Torpedo californica
GN=CHRNA1 PE=1 SV=1
Length = 461
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 109
NADG+F + TK + Y G + W PPAI+KS CEI V +FPFD+Q C +K G WTYDG
Sbjct: 119 NADGDFAIVHMTKLLLDYTGKIMWTPPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGT 178
Query: 110 KVPGS 114
KV S
Sbjct: 179 KVSIS 183
>sp|Q93149|ACR3_CAEEL Acetylcholine receptor subunit beta-type acr-3 OS=Caenorhabditis
elegans GN=acr-3 PE=2 SV=1
Length = 487
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 50 NADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTY 106
NADGN+ V+ + + + G + W PPA+YKSSC IDVE+FPFDEQ C L FGSWT+
Sbjct: 118 NADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVEFFPFDEQVCSLTFGSWTF 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.127 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,032,662
Number of Sequences: 539616
Number of extensions: 2492605
Number of successful extensions: 130805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3792
Number of HSP's successfully gapped in prelim test: 1014
Number of HSP's that attempted gapping in prelim test: 43277
Number of HSP's gapped (non-prelim): 54389
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)