Query psy16246
Match_columns 118
No_of_seqs 105 out of 1094
Neff 5.5
Searched_HMMs 46136
Date Fri Aug 16 16:32:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16246.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16246hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3646|consensus 99.8 3.4E-20 7.3E-25 156.7 5.0 76 42-117 110-185 (486)
2 TIGR00860 LIC Cation transport 99.7 1.4E-17 3.1E-22 140.4 5.7 77 41-117 112-190 (459)
3 KOG3645|consensus 99.7 2.8E-17 6E-22 138.4 6.3 74 42-115 113-187 (449)
4 PF02931 Neur_chan_LBD: Neurot 99.6 4.6E-16 9.9E-21 116.7 5.9 76 42-117 84-160 (217)
5 KOG3643|consensus 99.5 2.2E-14 4.8E-19 121.1 6.5 77 42-118 117-195 (459)
6 KOG3644|consensus 99.4 1.6E-13 3.6E-18 116.6 5.8 76 42-117 127-204 (457)
7 KOG3642|consensus 99.1 3.6E-11 7.9E-16 102.1 4.5 75 43-117 126-202 (466)
8 KOG3838|consensus 53.2 11 0.00025 32.7 2.4 51 62-118 154-208 (497)
9 PF15524 Toxin_45: Putative to 53.1 5.1 0.00011 27.6 0.2 58 60-117 7-90 (94)
10 KOG0556|consensus 50.8 25 0.00055 30.9 4.2 28 60-87 73-100 (533)
11 PF04795 PAPA-1: PAPA-1-like c 44.7 66 0.0014 21.6 4.7 23 55-77 63-85 (89)
12 cd08399 C2_PI3K_class_I_gamma 40.6 1.4E+02 0.003 22.7 6.4 46 57-102 30-86 (178)
13 KOG1379|consensus 36.9 79 0.0017 26.6 4.9 48 45-92 173-223 (330)
14 KOG0163|consensus 34.0 41 0.00088 32.0 3.0 20 4-23 936-955 (1259)
15 PF03277 Herpes_UL4: Herpesvir 29.1 90 0.002 24.3 3.8 35 79-113 63-110 (188)
16 KOG2891|consensus 26.1 79 0.0017 26.6 3.2 22 8-29 331-352 (445)
17 KOG0263|consensus 24.1 1.4E+02 0.0031 27.6 4.7 58 60-117 443-505 (707)
18 PF14208 DUF4320: Domain of un 22.8 75 0.0016 22.5 2.2 36 67-102 70-106 (116)
No 1
>KOG3646|consensus
Probab=99.80 E-value=3.4e-20 Score=156.68 Aligned_cols=76 Identities=43% Similarity=0.861 Sum_probs=73.2
Q ss_pred hhhhhhhhcCCCCCceeeeeeEEEEeccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEEEEEcC
Q psy16246 42 EEKKNNKENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNG 117 (118)
Q Consensus 42 ~~~~~~yNs~d~~~~~~~~~~v~I~~dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~ 117 (118)
.+||.+|||+|.+|+.+..+|++++++|.|.|.||....++|.+|++.||||.|.|.+.||||+|++..++|.+++
T Consensus 110 kPDVLLYNSade~FDsTy~tN~Vv~~tG~v~~vPPGIfk~sCkiDItwFPFD~Q~C~mKFGSWTY~G~~lDL~~~~ 185 (486)
T KOG3646|consen 110 KPDVLLYNSADEQFDSTYKTNYVVYSTGSVLWVPPGIFKSSCKIDITWFPFDDQVCYLKFGSWTYAGILLDLRIDD 185 (486)
T ss_pred CCceeccccccccCCCcceeeEEEccCCeeeecCCceeeeeeEEEEEEecccccEEEEEeeeEEEcceeeeeeecc
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999988654
No 2
>TIGR00860 LIC Cation transporter family protein. selective while glycine receptors are anion selective).
Probab=99.70 E-value=1.4e-17 Score=140.37 Aligned_cols=77 Identities=26% Similarity=0.418 Sum_probs=68.3
Q ss_pred hhhhhhhhhcCCCCCceeeeeeEEEEe--ccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEEEEEcC
Q psy16246 41 VEEKKNNKENADGNFEVTLATKATIYY--QGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNG 117 (118)
Q Consensus 41 ~~~~~~~yNs~d~~~~~~~~~~v~I~~--dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~ 117 (118)
--+||.+||++++.++....+++.|.+ ||+|.|.+|..+++.|++|+++||||+|+|.|.|+||+|+++++++.+.+
T Consensus 112 W~PDi~l~N~~~~~~~~~~~~~~~v~~~~~G~V~~~~~~~~~~~C~~d~~~FPfD~Q~C~l~fgSw~y~~~~i~l~~~~ 190 (459)
T TIGR00860 112 WVPDIFFYNEKDARFHGITMTNVLVRIHPNGSVLYSPRITLTLACPMDLRNFPFDVQNCSLKFESWGYTTNDIKLEWKE 190 (459)
T ss_pred ccCcEEeecCccccccccccCceEEEEcCCCcEEEecCceEEecccceeccCCCCCccccEEEhhhccccceEEEEECC
Confidence 357999999999887766556666655 99999999999999999999999999999999999999999999997643
No 3
>KOG3645|consensus
Probab=99.69 E-value=2.8e-17 Score=138.40 Aligned_cols=74 Identities=55% Similarity=0.933 Sum_probs=69.4
Q ss_pred hhhhhhhhcCCCCCceeeeeeEEEEeccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEE-EEE
Q psy16246 42 EEKKNNKENADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVP-GSV 115 (118)
Q Consensus 42 ~~~~~~yNs~d~~~~~~~~~~v~I~~dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~-Ls~ 115 (118)
-++|.+||++++++.....+++.|.++|.|.|.+|..+.++|++|+++||||.|+|.+.|+||+|++.+++ +..
T Consensus 113 ~Pdi~l~N~~~~~~~~~~~~~v~v~~~G~V~~~~p~i~~s~C~idv~~FPfD~Q~C~i~f~sw~~~~~~i~~~~~ 187 (449)
T KOG3645|consen 113 LPDIVLYNNADGDFEVEDLTNVLVTYTGEVLWYPPAIYKSSCPIDVTYFPFDVQNCSIKFGSWTYDGSEVDGLDL 187 (449)
T ss_pred cCcEEEEecccccccccccceEEEEECCEEEEEcceEEEeecccccccCCCcceeEeEEEeccccCccccceeee
Confidence 47899999999999998888899999999999999999999999999999999999999999999999876 543
No 4
>PF02931 Neur_chan_LBD: Neurotransmitter-gated ion-channel ligand binding domain ion channel family signature gamma-aminobutyric acid (GABA) receptor signature nicotinic acetylcholine receptor signature; InterPro: IPR006202 Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily: Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits []. Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits []. Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known []. Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) []. Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) []. These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ]. This entry presents the extracellular ligand binding domain of these ion channels. This domain forms a pentameric arrangement in the known structure. ; GO: 0005230 extracellular ligand-gated ion channel activity, 0006810 transport, 0016020 membrane; PDB: 1LXH_B 1ABT_B 1TOS_A 1LXG_B 1IDG_B 1TOR_A 1IDH_B 3IGQ_B 3TLU_B 3UU5_A ....
Probab=99.63 E-value=4.6e-16 Score=116.71 Aligned_cols=76 Identities=32% Similarity=0.632 Sum_probs=66.1
Q ss_pred hhhhhhhhcCCCCCcee-eeeeEEEEeccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEEEEEcC
Q psy16246 42 EEKKNNKENADGNFEVT-LATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNG 117 (118)
Q Consensus 42 ~~~~~~yNs~d~~~~~~-~~~~v~I~~dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~ 117 (118)
-++|.++|+..+..... ....+.|.++|+|.|.+++.+++.|+|++..||||+|.|.|.|+||+|+..+|.|.+..
T Consensus 84 ~P~l~~~n~~~~~~~~~~~~~~~~v~~~G~V~~~~~~~~~~~C~~d~~~fPfD~q~C~i~~~s~~~~~~~v~l~~~~ 160 (217)
T PF02931_consen 84 TPDLYFYNSVSGSFEITEPNSNVRVYSDGTVRYSPRFTLTFSCPMDLRDFPFDSQNCSIKFGSWSYNSEEVQLKWEN 160 (217)
T ss_dssp ---EEETTBSSSEEECS-SSEEEEEETTSEEEEEEEEEEEEEECETTTSSSSSEEEEEEEEEESSSSTTTEEEEESC
T ss_pred ecccccccccccceecccccccccccccchheeeecccccccccccccccccccceeEEEEecccccccceeeeecc
Confidence 46889999766555544 67899999999999999999999999999999999999999999999999999998764
No 5
>KOG3643|consensus
Probab=99.51 E-value=2.2e-14 Score=121.11 Aligned_cols=77 Identities=18% Similarity=0.265 Sum_probs=68.7
Q ss_pred hhhhhhhhcCCCCCce--eeeeeEEEEeccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEEEEEcCC
Q psy16246 42 EEKKNNKENADGNFEV--TLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNGA 118 (118)
Q Consensus 42 ~~~~~~yNs~d~~~~~--~~~~~v~I~~dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~~ 118 (118)
-+|-++-|+...-++. +.+..++|.+||+|+|..+++.+..|+|||++||+|+|.|.|.+.||+|+.++|.+.|.+|
T Consensus 117 vPDTff~N~KkSf~H~~T~~N~~lRl~~dGtVlys~RlT~Ta~C~MDL~~fPmD~Q~C~LeiESYGYt~~DI~y~W~~g 195 (459)
T KOG3643|consen 117 VPDTFFPNSKKSFFHDVTTHNSLLRLHPDGTVLYSIRLTVTAACPMDLKLFPMDSQNCKLEIESYGYTTDDIEYYWSKG 195 (459)
T ss_pred cCceecccCcccccceeeecceEEEEcCCCeEEEEEEEEEEEecccccccCCCcccceeEEEEecccccccEEEEEcCC
Confidence 3567788877766664 3578899999999999999999999999999999999999999999999999999998864
No 6
>KOG3644|consensus
Probab=99.43 E-value=1.6e-13 Score=116.64 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=68.5
Q ss_pred hhhhhhhhcCCCCCcee--eeeeEEEEeccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEEEEEcC
Q psy16246 42 EEKKNNKENADGNFEVT--LATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNG 117 (118)
Q Consensus 42 ~~~~~~yNs~d~~~~~~--~~~~v~I~~dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~ 117 (118)
.+|..+=|+....++.+ .+..+.|++||+|++..|+.++.+|+|++.+||+|+|.|.+.+.||+|+.++|.+.+.+
T Consensus 127 ~Pd~~F~NsK~a~~H~~~~~N~ll~I~pnGtV~~~~Ri~l~~~C~m~L~~fP~D~Q~C~l~~eSy~Yn~~~v~~~W~~ 204 (457)
T KOG3644|consen 127 TPDTFFANSKSAEFHKSTKPNVLLMIFPNGTVWYSYRISLTLPCNMDLSKFPMDSQECKLQLESYAYNTDDVRLEWKE 204 (457)
T ss_pred cCceeeecccceeeecCCCCceEEEEecCCeEEEEEEEEEeeceeeehhhCCCccceeeEEEEEeccccceEEEEecC
Confidence 46677778877777754 57789999999999999999999999999999999999999999999999999999875
No 7
>KOG3642|consensus
Probab=99.14 E-value=3.6e-11 Score=102.10 Aligned_cols=75 Identities=24% Similarity=0.396 Sum_probs=66.1
Q ss_pred hhhhhhhcCCCCCce--eeeeeEEEEeccEEEEeCCeeEEeecccccccCCCCcceeeeEEecccccCCeEEEEEcC
Q psy16246 43 EKKNNKENADGNFEV--TLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNG 117 (118)
Q Consensus 43 ~~~~~yNs~d~~~~~--~~~~~v~I~~dGtV~~~~p~~~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~ 117 (118)
+|-+.+|+..+..+. +++..++|..||+|+|..++++.+.|+|++..||||.|.|.+.|||++|...++...+.+
T Consensus 126 PDTfF~NgkkS~~H~iT~pN~l~Ri~~dG~vlyt~RlTi~A~C~m~l~~fPMD~haCpl~fgSy~Y~~~evvY~W~~ 202 (466)
T KOG3642|consen 126 PDTFFRNGKKSYAHNITTPNKLVRIYIDGTVLYTMRLTIPAECPMHLARFPMDSHACPLKFGSYAYPGSEVVYKWKK 202 (466)
T ss_pred CCcccccCcccceeeccCCCceEEEeECCcceEEEEEeecccCcchhhcCCCCcccCcceecccCcCCCCEEEEEec
Confidence 455678887766653 467789999999999999999999999999999999999999999999999999887654
No 8
>KOG3838|consensus
Probab=53.19 E-value=11 Score=32.70 Aligned_cols=51 Identities=22% Similarity=0.373 Sum_probs=36.0
Q ss_pred eEEEEeccEEEEeCCee----EEeecccccccCCCCcceeeeEEecccccCCeEEEEEcCC
Q psy16246 62 KATIYYQGLVEWKPPAI----YKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNGA 118 (118)
Q Consensus 62 ~v~I~~dGtV~~~~p~~----~~~~C~mdl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~~ 118 (118)
-..|.+||++.|..+.. +-++|..||++=||.+.. .+ +|-..-+.+.+++|
T Consensus 154 Is~~lndGt~~ydh~~DGasQ~LssCqrDFRNkPyPvRa---rI---tY~~nvLtv~innG 208 (497)
T KOG3838|consen 154 ISVLLNDGTIPYDHPGDGASQGLSSCQRDFRNKPYPVRA---RI---TYYGNVLTVMINNG 208 (497)
T ss_pred EEEEecCCcccccCCCccHHHHHHHhhHHhccCCCCceE---EE---EEeccEEEEEEcCC
Confidence 45678999999988764 446899999997775432 22 35566666666665
No 9
>PF15524 Toxin_45: Putative toxin 45
Probab=53.05 E-value=5.1 Score=27.56 Aligned_cols=58 Identities=29% Similarity=0.378 Sum_probs=40.4
Q ss_pred eeeEEEEeccEEEEeCCeeEEeeccc-----------------------ccccCCCCcceee---eEEecccccCCeEEE
Q psy16246 60 ATKATIYYQGLVEWKPPAIYKSSCEI-----------------------DVEYFPFDEQTCV---LKFGSWTYDGFKVPG 113 (118)
Q Consensus 60 ~~~v~I~~dGtV~~~~p~~~~~~C~m-----------------------dl~~FPfD~Q~C~---L~fgSwsys~~eI~L 113 (118)
..++-+-..|.+.|.||-.++.+-++ .-.-|-+|+|.-. -.+|-|+-++..+++
T Consensus 7 i~~a~LP~~G~iRyiPp~~y~~s~~Lprgp~nGyvDkFGNeWtkgPsrtkgq~fEWDVQLS~~G~~q~G~~t~dG~hlNv 86 (94)
T PF15524_consen 7 IKYAELPNQGRIRYIPPKNYKASRPLPRGPNNGYVDKFGNEWTKGPSRTKGQEFEWDVQLSETGREQLGWATRDGKHLNV 86 (94)
T ss_pred ceeccCCCCCceeecCcccccccCccCCCCCCcchhcccceeccCCCccCCcceEEEeeeCHhHHHHhcceecCCceEee
Confidence 34566667888999888888777766 1123556666432 346778888999999
Q ss_pred EEcC
Q psy16246 114 SVNG 117 (118)
Q Consensus 114 s~~~ 117 (118)
+++|
T Consensus 87 s~Dg 90 (94)
T PF15524_consen 87 SLDG 90 (94)
T ss_pred cCCC
Confidence 8876
No 10
>KOG0556|consensus
Probab=50.78 E-value=25 Score=30.86 Aligned_cols=28 Identities=7% Similarity=-0.098 Sum_probs=19.6
Q ss_pred eeeEEEEeccEEEEeCCeeEEeeccccc
Q psy16246 60 ATKATIYYQGLVEWKPPAIYKSSCEIDV 87 (118)
Q Consensus 60 ~~~v~I~~dGtV~~~~p~~~~~~C~mdl 87 (118)
...+....+|...|..-..+++.|.-.+
T Consensus 73 v~dl~~~~~~~~V~vRgrVhtsr~~GK~ 100 (533)
T KOG0556|consen 73 VSDLDESNDGSEVLVRGRVHTSRLKGKL 100 (533)
T ss_pred hhhhhhhcCCceEEEEEEEeeccccceE
Confidence 3456667788888877777777776643
No 11
>PF04795 PAPA-1: PAPA-1-like conserved region; InterPro: IPR006880 This is a group of proteins with a conserved C-terminal region which is found in PAPA-1, a PAP-1 binding protein, Q9C086 from SWISSPROT.
Probab=44.73 E-value=66 Score=21.65 Aligned_cols=23 Identities=9% Similarity=-0.175 Sum_probs=14.7
Q ss_pred CceeeeeeEEEEeccEEEEeCCe
Q psy16246 55 FEVTLATKATIYYQGLVEWKPPA 77 (118)
Q Consensus 55 ~~~~~~~~v~I~~dGtV~~~~p~ 77 (118)
......+..+...+|+++-+|.-
T Consensus 63 ~~~~~~IR~v~~~~G~~vs~P~~ 85 (89)
T PF04795_consen 63 KPNPPMIRWVSNKNGSRVSVPEE 85 (89)
T ss_pred CCCCCEEEEEECCCceEEEecCC
Confidence 33444556666788888876653
No 12
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=40.60 E-value=1.4e+02 Score=22.66 Aligned_cols=46 Identities=15% Similarity=0.082 Sum_probs=29.3
Q ss_pred eeeeeeEEEEeccEEEEeCCeeEEee-----------cccccccCCCCcceeeeEEe
Q psy16246 57 VTLATKATIYYQGLVEWKPPAIYKSS-----------CEIDVEYFPFDEQTCVLKFG 102 (118)
Q Consensus 57 ~~~~~~v~I~~dGtV~~~~p~~~~~~-----------C~mdl~~FPfD~Q~C~L~fg 102 (118)
......+.|+|+|.++...+...... -++.++.-|.+++.|.-.+.
T Consensus 30 ~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~ti~~ 86 (178)
T cd08399 30 LTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQIYC 86 (178)
T ss_pred eEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEEEEE
Confidence 34567788899888776555444433 34555567777888765554
No 13
>KOG1379|consensus
Probab=36.88 E-value=79 Score=26.60 Aligned_cols=48 Identities=10% Similarity=0.088 Sum_probs=35.1
Q ss_pred hhhhhcCCCCCcee--eeeeEEEEeccEEEEe-CCeeEEeecccccccCCC
Q psy16246 45 KNNKENADGNFEVT--LATKATIYYQGLVEWK-PPAIYKSSCEIDVEYFPF 92 (118)
Q Consensus 45 ~~~yNs~d~~~~~~--~~~~v~I~~dGtV~~~-~p~~~~~~C~mdl~~FPf 92 (118)
|.+++.-++.++.. .+.=..|.++|+|.+. ++..+-+.||.+|+..|-
T Consensus 173 I~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs~~p~ 223 (330)
T KOG1379|consen 173 ILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLSSPPE 223 (330)
T ss_pred eeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeeccCCc
Confidence 56666655555543 4566788999999884 555777888999999883
No 14
>KOG0163|consensus
Probab=34.04 E-value=41 Score=31.96 Aligned_cols=20 Identities=55% Similarity=0.880 Sum_probs=13.4
Q ss_pred hhhhhhHHHHHHhHHHHHhh
Q psy16246 4 KKKRKEKEEKERKKEEQKKE 23 (118)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~ 23 (118)
-++|+|.|||+|.++|.++.
T Consensus 936 ER~rrEaeek~rre~ee~k~ 955 (1259)
T KOG0163|consen 936 ERKRREAEEKRRREEEEKKR 955 (1259)
T ss_pred HHHhhhhhHHHHHHHHHHHH
Confidence 35677777777777666554
No 15
>PF03277 Herpes_UL4: Herpesvirus UL4 family; InterPro: IPR004958 This is a family of Herpes virus UL4 proteins, which are related to Human herpesvirus 1 (HHV-1), Human herpesvirus 2 (HHV-2), Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) 58, and Human herpesvirus 3 VZV-32 56 proteins.
Probab=29.12 E-value=90 Score=24.26 Aligned_cols=35 Identities=26% Similarity=0.500 Sum_probs=23.4
Q ss_pred EEeecccccccCCC-------------CcceeeeEEecccccCCeEEE
Q psy16246 79 YKSSCEIDVEYFPF-------------DEQTCVLKFGSWTYDGFKVPG 113 (118)
Q Consensus 79 ~~~~C~mdl~~FPf-------------D~Q~C~L~fgSwsys~~eI~L 113 (118)
+.+.|..+|-.|-| |...|.+.|.+|+..+..-.+
T Consensus 63 i~VDc~~efCsY~f~~~~~~~~~~~~~~~~~~v~PF~sw~~~~~~~~~ 110 (188)
T PF03277_consen 63 IVVDCGAEFCSYRFTGRESRRRPLSWWPGSTCVYPFDSWVVSGRDRSL 110 (188)
T ss_pred EEEecccceeEEEEeccccccccccCCCCCEEEEecceeEEeCCCcee
Confidence 34556555554444 577899999999877665443
No 16
>KOG2891|consensus
Probab=26.14 E-value=79 Score=26.65 Aligned_cols=22 Identities=45% Similarity=0.543 Sum_probs=12.4
Q ss_pred hhHHHHHHhHHHHHhhhccccc
Q psy16246 8 KEKEEKERKKEEQKKEVGEKKE 29 (118)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~ 29 (118)
.++.|-|+-.||+|+...|..|
T Consensus 331 qekqeleqmaeeekkr~eeaee 352 (445)
T KOG2891|consen 331 QEKQELEQMAEEEKKREEEAEE 352 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666665544333
No 17
>KOG0263|consensus
Probab=24.06 E-value=1.4e+02 Score=27.61 Aligned_cols=58 Identities=17% Similarity=0.307 Sum_probs=44.7
Q ss_pred eeeEEEEeccEEE---EeCCeeEEeeccc--ccccCCCCcceeeeEEecccccCCeEEEEEcC
Q psy16246 60 ATKATIYYQGLVE---WKPPAIYKSSCEI--DVEYFPFDEQTCVLKFGSWTYDGFKVPGSVNG 117 (118)
Q Consensus 60 ~~~v~I~~dGtV~---~~~p~~~~~~C~m--dl~~FPfD~Q~C~L~fgSwsys~~eI~Ls~~~ 117 (118)
.....+-|.|.|+ +.|--.+-++|+- .++.|=.|+++|.+.+.-..|+.=++++++.|
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G 505 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG 505 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCc
Confidence 3445778999865 4666677788865 55689999999999999888888888887653
No 18
>PF14208 DUF4320: Domain of unknown function (DUF4320)
Probab=22.80 E-value=75 Score=22.50 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=30.2
Q ss_pred eccEEEEeCCeeEEeecccccccC-CCCcceeeeEEe
Q psy16246 67 YQGLVEWKPPAIYKSSCEIDVEYF-PFDEQTCVLKFG 102 (118)
Q Consensus 67 ~dGtV~~~~p~~~~~~C~mdl~~F-PfD~Q~C~L~fg 102 (118)
-+|.|-+..++.++..+..++..| ||++..-+|.+.
T Consensus 70 ~~~kVq~n~~v~vtvt~~~~~~~F~~~~~~~i~i~a~ 106 (116)
T PF14208_consen 70 TTGKVQLNEEVTVTVTGEYKIGIFKGFGSFPITIRAK 106 (116)
T ss_pred cCCcccCCCEEEEEEEEEEEEEEECCCCCccEEEEEE
Confidence 889999999999999999999887 888777666654
Done!