BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1625
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28IN9|PKRI1_XENTR PRKR-interacting protein 1 homolog OS=Xenopus tropicalis GN=prkrip1
PE=2 SV=1
Length = 173
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
MGSSAGAGSGEFHVYRHLRR+EY RQ+ + SEK LD++FQ+K+ E ++ E+KTAK+
Sbjct: 67 MGSSAGAGSGEFHVYRHLRRREYQRQEFLDRVSEKHNLDDDFQRKLMENKKLEEEKTAKR 126
Query: 61 R 61
R
Sbjct: 127 R 127
>sp|Q568A0|PKRI1_DANRE PRKR-interacting protein 1 homolog OS=Danio rerio GN=prkrip1 PE=2
SV=1
Length = 182
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
MGSSAGAGSGEFHVYRHLRR+EY RQ ++ SEK+ LDEE+++K+ E ++ ED+TA
Sbjct: 68 MGSSAGAGSGEFHVYRHLRRREYQRQDFLERLSEKQKLDEEYKEKLIENQKAAEDRTA 125
>sp|Q6GNG8|PKRI1_XENLA PRKR-interacting protein 1 homolog OS=Xenopus laevis GN=prkrip1
PE=2 SV=1
Length = 173
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 50/61 (81%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
MGSSAGAGSGEFHVYRHLRR+EY RQ+ + SEK+ LDEE+++K+ + + E++TAK+
Sbjct: 67 MGSSAGAGSGEFHVYRHLRRREYQRQEFLDGMSEKQRLDEEYKKKLIQNKMLEEERTAKR 126
Query: 61 R 61
R
Sbjct: 127 R 127
>sp|Q5ZKU0|PKRI1_CHICK PRKR-interacting protein 1 homolog OS=Gallus gallus GN=PRKRIP1 PE=2
SV=1
Length = 189
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
MGSSAGAGSGEFHVYRHLRR+EY RQ + +EK+ LDEEFQ+K++ + E++TA
Sbjct: 66 MGSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEEQTA 123
>sp|Q5R5J3|PKRI1_PONAB PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1
Length = 184
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
MGSSAGAGSGEFHVYRHLRR+EY RQ ++ +EK+ LD EFQ+++++ + E++TA
Sbjct: 68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQTA 125
>sp|Q9H875|PKRI1_HUMAN PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1
Length = 184
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
MGSSAGAGSGEFHVYRHLRR+EY RQ ++ +EK+ LD EFQ+++++ + E++TA
Sbjct: 68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQTA 125
>sp|Q9CWV6|PKRI1_MOUSE PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2
Length = 186
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
MGSSAGAGSGEFHVYRHLRR+EY RQ ++ +EK+ LD EFQ+++++ + E++TA
Sbjct: 68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQTA 125
>sp|Q2KIT1|PKRI1_BOVIN PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1
Length = 186
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
MGSSAGAGSGEFHVYRHLRR+EY RQ ++ +EK+ L+ EFQ++++ + E++TA
Sbjct: 68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIAAEEQTA 125
>sp|P41880|YPT2_CAEEL Uncharacterized protein F37A4.2 OS=Caenorhabditis elegans
GN=F37A4.2 PE=4 SV=1
Length = 189
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
+GSSA AGS EFH+YR+ RRKE R +I ++KE LD+ ++ K+++ + E KTAKK
Sbjct: 59 VGSSAAAGSAEFHIYRNNRRKEQNRLDYIDAVAKKEELDDAYRHKVEKLEKEEESKTAKK 118
Query: 61 RAKRLKRKQKLK 72
RAKRL++K K
Sbjct: 119 RAKRLRQKAAAK 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.296 0.119 0.298
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,979,628
Number of Sequences: 539616
Number of extensions: 2415262
Number of successful extensions: 104219
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4226
Number of HSP's successfully gapped in prelim test: 3256
Number of HSP's that attempted gapping in prelim test: 29980
Number of HSP's gapped (non-prelim): 45133
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 55 (25.8 bits)