RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1625
         (130 letters)



>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
          chain {Azotobacter vinelandii [TaxId: 354]}
          Length = 477

 Score = 32.3 bits (73), Expect = 0.011
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 40 EEFQQKIQEKRQTFEDKTAKKRAKRLKRKQKLKNKPKKVKT 80
          EE +  IQE  + + +K  K R K L        + KK   
Sbjct: 4  EEVESLIQEVLEVYPEKARKDRNKHLAVNDPAVTQSKKCII 44


>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1)
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 327

 Score = 30.8 bits (69), Expect = 0.034
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 65  LKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDENSDKDEDNKEGNEEVSERKTEIEQ 122
           LK K  LK K          E      D   E E ++ +++      +   ++ +++ 
Sbjct: 133 LKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEMEDEAVRSQVQHKPKEDKLKL 190


>d1m1nb_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta
          chain {Azotobacter vinelandii [TaxId: 354]}
          Length = 522

 Score = 30.4 bits (68), Expect = 0.046
 Identities = 6/27 (22%), Positives = 16/27 (59%)

Query: 39 DEEFQQKIQEKRQTFEDKTAKKRAKRL 65
          D++++  + +KR  FE+K  + +   +
Sbjct: 16 DQDYKDMLAKKRDGFEEKYPQDKIDEV 42


>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
          chain {Clostridium pasteurianum [TaxId: 1501]}
          Length = 525

 Score = 26.7 bits (58), Expect = 1.1
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 43 QQKIQEKRQTFEDKTAKKRAKRLKRKQK 70
          +    E  + +  KT K R+  +  K +
Sbjct: 2  ENLKDEILEKYIPKTKKTRSGHIVIKTE 29


>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet
           oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 665

 Score = 25.1 bits (54), Expect = 3.6
 Identities = 8/44 (18%), Positives = 21/44 (47%)

Query: 11  EFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFE 54
            F +   +R   + R  H+QE  + E +  E ++ +++  +  +
Sbjct: 95  RFDIEMSMREDVFQRIVHLQETCDLEKIKPEARRYLEKSIKMGK 138


>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet
           oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 654

 Score = 25.1 bits (54), Expect = 3.9
 Identities = 14/64 (21%), Positives = 27/64 (42%)

Query: 11  EFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQK 70
           EF V   +R   Y R   +QEK +K+ L  E  + ++   +           +  +  ++
Sbjct: 84  EFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKR 143

Query: 71  LKNK 74
           +K K
Sbjct: 144 IKKK 147


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.296    0.119    0.298 

Gapped
Lambda     K      H
   0.267   0.0614    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 424,011
Number of extensions: 19050
Number of successful extensions: 140
Number of sequences better than 10.0: 1
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 97
Length of query: 130
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 54
Effective length of database: 1,364,116
Effective search space: 73662264
Effective search space used: 73662264
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 48 (22.5 bits)