BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16250
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8MKW7|RNZ_DROME Ribonuclease Z, mitochondrial OS=Drosophila melanogaster GN=JhI-1
PE=1 SV=2
Length = 766
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 191/339 (56%), Gaps = 71/339 (20%)
Query: 134 DTCILLDCGEGTYSQLVRLYGSAVDTL-LSQLSAVYISHLHADHHLGLFSVIKAWSRVKP 192
D +LLDCGEGTY Q+VRLYG L L QL A+Y+SHLHADHH+GL +++ ++KP
Sbjct: 483 DAYVLLDCGEGTYGQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGLLRERRQLKP 542
Query: 193 ECK-LTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDP 251
L LLAPRQI WL Y + E+V Y LV G P
Sbjct: 543 RADPLILLAPRQIEPWLEFYNRQIETVEDAYTLV-----------------GNGELLASP 585
Query: 252 DTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGH-----KITYSGDTMPCDALVSIGK 306
+ + + LG+ S++TCLVRHCPN+FG+++ + H KITYSGDTMPC L+ +G+
Sbjct: 586 LSGEQVERLGITSISTCLVRHCPNSFGISLTLAAKHNSEPVKITYSGDTMPCQDLIDLGR 645
Query: 307 NSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKD 366
+S +LIHEAT ED+LE+EA LK HSTVSQAI+ GR M A+ +LTHFSQRYAK PRL D
Sbjct: 646 DSTVLIHEATMEDDLEEEARLKTHSTVSQAIQQGRNMNARHTILTHFSQRYAKCPRLPSD 705
Query: 367 LS-ENVGIAFDNMRFPEKKKKKKKKKKKRKKKKKKKKKKVNNSIQISSRPEICREFDSKK 425
+ V IAFDNM +
Sbjct: 706 EDMQRVAIAFDNM----------------------------------------------E 719
Query: 426 ISLANLPKLKLFYPALKAMFAEYQDEIENRAIRRNLKQE 464
+++ +L YPAL AM+AEY +E+E RA++R LKQE
Sbjct: 720 VTIEDLQHYHKLYPALFAMYAEYTEELEQRAVKRELKQE 758
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 5 SPKVTECS----SVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIM 60
S VTE S S LD PSE+YL +LL + + + + ALV HF+P+HI
Sbjct: 245 SVDVTEASETALSFVFLDVPSENYLPALLTHG--KRLKKLGEEKLTEVALVVHFTPYHIS 302
Query: 61 SHPRYKEFMSK-FPSTTQHLVLNES-NECQGSTAVHKIQCKLNILDKEIFPMLSD 113
S YK+F+ + F S QH+ L+ N+ G A H+IQ +L+ L ++FP+L +
Sbjct: 303 SRQVYKDFVVESFSSEAQHIYLSSPLNQFSGYAAAHRIQHQLHQLAPQVFPLLGE 357
>sp|Q8HY87|RNZ2_MACFA Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis
GN=ELAC2 PE=2 SV=1
Length = 826
Score = 244 bits (624), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 161/252 (63%), Gaps = 13/252 (5%)
Query: 133 PDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRV-- 190
PDT +LLDCGEGT+ QL R YG VD +L L+AV++SHLHADHH GL +++ R
Sbjct: 508 PDTSLLLDCGEGTFGQLYRHYGDQVDRVLGSLAAVFVSHLHADHHTGLLNILLQRERALA 567
Query: 191 ---KPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
KP L ++AP Q+ WL Y + + V H ++P I + P
Sbjct: 568 SLGKPFHPLLVVAPTQLKAWLQQYHNQCQEVLHHVSMIPAKYLQVGAEI--------SSP 619
Query: 248 ALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKN 307
A++ +L + LE TCLVRHC +AFG +V SG K+ YSGDTMPC+ALV +GK+
Sbjct: 620 AVERLISSLLRTCDLEEFQTCLVRHCRHAFGCALVHTSGWKVVYSGDTMPCEALVQMGKD 679
Query: 308 SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDL 367
+ LLIHEAT ED LE+EA K HST SQAIR+G M A+F++L HFSQRYAK+P + D
Sbjct: 680 ATLLIHEATLEDGLEEEAVEKTHSTTSQAIRVGMRMNAEFIMLNHFSQRYAKVPLFSPDF 739
Query: 368 SENVGIAFDNMR 379
+E VGIAFD+M+
Sbjct: 740 NEKVGIAFDHMK 751
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 12 SSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSK 71
++ V++CP E ++ + + F ++Q A D ALV H +P +++ RY+++M +
Sbjct: 304 AAFVVVECPDEGFIQPICENATFQRYQGKA---DAPVALVVHMAPESVLADSRYQQWMER 360
Query: 72 FPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLSDSGFPLLDKG 122
F TQHLVLNE+ + +KIQ +LN++ +IFP+L+ FP +G
Sbjct: 361 FGPDTQHLVLNENCASVHNLRSYKIQTQLNLIHPDIFPLLTS--FPRKKEG 409
>sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1
SV=2
Length = 826
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/252 (50%), Positives = 164/252 (65%), Gaps = 13/252 (5%)
Query: 133 PDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRV-- 190
PDT +LLDCGEGT+ QL R YG VD +L L+AV++SHLHADHH GL S++ R
Sbjct: 508 PDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSILLQRERALA 567
Query: 191 ---KPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
KP L ++AP Q+ WL Y + + V H ++P K L EG E + P
Sbjct: 568 SLGKPLHPLLVVAPNQLKAWLQQYHNQCQEVLHHISMIP-----AKCLQEGAEI---SSP 619
Query: 248 ALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKN 307
A++ +L + LE TCLVRHC +AFG +V SG K+ YSGDTMPC+ALV +GK+
Sbjct: 620 AVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPCEALVRMGKD 679
Query: 308 SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDL 367
+ LLIHEAT ED LE+EA K HST SQAI +G M A+F++L HFSQRYAK+P + +
Sbjct: 680 ATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQRYAKVPLFSPNF 739
Query: 368 SENVGIAFDNMR 379
SE VG+AFD+M+
Sbjct: 740 SEKVGVAFDHMK 751
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 12 SSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSK 71
++ V++CP E ++ + + F ++Q A D ALV H +P ++ RY+++M +
Sbjct: 304 AAFVVVECPDESFIQPICENATFQRYQGKA---DAPVALVVHMAPASVLVDSRYQQWMER 360
Query: 72 FPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLS 112
F TQHLVLNE+ + HKIQ +LN++ +IFP+L+
Sbjct: 361 FGPDTQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPLLT 401
>sp|Q9GL72|RNZ2_PANTR Zinc phosphodiesterase ELAC protein 2 OS=Pan troglodytes GN=ELAC2
PE=2 SV=1
Length = 826
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 164/252 (65%), Gaps = 13/252 (5%)
Query: 133 PDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRV-- 190
PDT +LLDCGEGT+ QL R YG VD +L L+AV++SHLHADHH GL +++ R
Sbjct: 508 PDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNILLQRERALA 567
Query: 191 ---KPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
KP L ++AP Q+ WL Y + + V H ++P K L EG E + P
Sbjct: 568 SLGKPFHPLLVVAPNQLKAWLQQYHNQCQEVLHHISMIP-----AKCLQEGAEI---SSP 619
Query: 248 ALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKN 307
A++ +L + LE TCLVRHC +AFG +V SG K+ YSGDTMPC+ALV +GK+
Sbjct: 620 AVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPCEALVRMGKD 679
Query: 308 SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDL 367
+ LLIHEAT ED LE+EA K HST SQAI +G M A+F++L HFSQRYAK+P + +
Sbjct: 680 ATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQRYAKVPLFSPNF 739
Query: 368 SENVGIAFDNMR 379
+E VG+AFD+M+
Sbjct: 740 NEKVGVAFDHMK 751
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 12 SSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSK 71
++ V++CP E ++ + + F ++Q A D ALV H +P ++ RY+++M +
Sbjct: 304 AAFVVVECPDESFIQPICENATFQRYQGKA---DAPVALVVHMAPESVLVDSRYQQWMER 360
Query: 72 FPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLSDSGFPLLDKG 122
F TQHLVLNE+ + HKIQ +LN++ +IFP+L+ FP +G
Sbjct: 361 FGPDTQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPLLTS--FPCKKEG 409
>sp|Q9GL73|RNZ2_GORGO Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla
GN=ELAC2 PE=2 SV=1
Length = 826
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 164/252 (65%), Gaps = 13/252 (5%)
Query: 133 PDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVI-----KAW 187
PDT +LLDCGEGT+ QL R YG VD +L L+AV++SHLHADHH GL +++
Sbjct: 508 PDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNILLQREQALA 567
Query: 188 SRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
S KP L ++AP Q+ WL Y + + V H ++P K L EG E + P
Sbjct: 568 SLGKPLHPLLVVAPSQLKAWLQQYHNQCQEVLHHISMIP-----AKCLQEGAEI---SSP 619
Query: 248 ALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKN 307
A++ +L + LE TCLVRHC +AFG +V SG K+ YSGDTMPC+ALV +GK+
Sbjct: 620 AVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPCEALVRMGKD 679
Query: 308 SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDL 367
+ LLIHEAT ED LE+EA K HST SQAI +G M A+F++L HFSQRYAK+P + +
Sbjct: 680 ATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQRYAKVPLFSPNF 739
Query: 368 SENVGIAFDNMR 379
+E VG+AFD+M+
Sbjct: 740 NEKVGVAFDHMK 751
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 12 SSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSK 71
++ V++CP E ++ + + F ++Q A D ALV H +P ++ RY+++M +
Sbjct: 304 AAFVVVECPDESFIQPICENATFQRYQGKA---DAPVALVVHMAPESVLVDSRYQQWMER 360
Query: 72 FPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLSDSGFPLLDKG 122
F TQHLVLNE+ + HKIQ +LN++ +IFP+L+ FP +G
Sbjct: 361 FGPDTQHLVLNENCASVHNLRSHKIQTQLNLIHPDIFPLLTS--FPCKKEG 409
>sp|Q8CGS5|RNZ2_RAT Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus GN=Elac2
PE=2 SV=1
Length = 827
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 181/335 (54%), Gaps = 59/335 (17%)
Query: 133 PDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVI-----KAW 187
PD +LLDCGEGT+ QL R YG +D +L L+AV++SHLHADHH GL +++
Sbjct: 507 PDKSVLLDCGEGTFGQLCRHYGQQIDRVLCNLTAVFVSHLHADHHTGLLNILLQREHALA 566
Query: 188 SRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
S KP L ++AP Q+ WL Y + + + H ++P K L +G E P
Sbjct: 567 SLGKPFQPLLVVAPTQLRAWLQQYHNQCQEILHHISMIP-----AKCLQKGAEVPS---P 618
Query: 248 ALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKN 307
++ +L + L+ TCLVRHC +AFG +V SG K+ YSGDTMPC+ALV +GK+
Sbjct: 619 PVERLISLLLETCDLQEFQTCLVRHCKHAFGCALVHSSGWKVVYSGDTMPCEALVQMGKD 678
Query: 308 SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDL 367
+ LLIHEAT ED LE+EA K HST SQAI +G M A+F++L HFSQRYAK+P + D
Sbjct: 679 ATLLIHEATLEDGLEEEAVEKTHSTTSQAIGVGMRMNAEFIMLNHFSQRYAKIPLFSPDF 738
Query: 368 SENVGIAFDNMRFPEKKKKKKKKKKKRKKKKKKKKKKVNNSIQISSRPEICREFDSKKIS 427
+E VGIAFD+M K+
Sbjct: 739 NEKVGIAFDHM----------------------------------------------KVC 752
Query: 428 LANLPKLKLFYPALKAMFAEYQDEIENRAIRRNLK 462
+ P + P LKA+FA+ +E+ R +R L+
Sbjct: 753 FGDFPTVPKLIPPLKALFADDIEEMVERREKRELR 787
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 16 VLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSKFPST 75
V++CP E ++ + F ++Q A D A+V H +P ++ RY+++M +F
Sbjct: 307 VVECPDEGFIQPICENDTFQRYQGEA---DAPVAVVVHIAPESVLIDSRYQQWMERFGPD 363
Query: 76 TQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLS 112
TQHL+LNE+ + HKIQ +L+++ +IFP L+
Sbjct: 364 TQHLILNENCPSVHNLRSHKIQTQLSLIHPDIFPQLT 400
>sp|Q80Y81|RNZ2_MOUSE Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus GN=Elac2 PE=1
SV=1
Length = 831
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 156/252 (61%), Gaps = 13/252 (5%)
Query: 133 PDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVI-----KAW 187
PD +LLDCGEGT+ QL R YG +D +L L+AV++SHLHADHH GL +++
Sbjct: 504 PDKSVLLDCGEGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALA 563
Query: 188 SRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
S KP L ++AP Q+ WL Y + + H ++P + T
Sbjct: 564 SLGKPFQPLLVVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNT-------- 615
Query: 248 ALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKN 307
L+ +L + LE TCLVRHC +AFG +V SG K+ YSGDTMPC+ALV +GK+
Sbjct: 616 TLERLISLLLETCDLEEFQTCLVRHCKHAFGCALVHSSGWKVVYSGDTMPCEALVQMGKD 675
Query: 308 SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDL 367
+ LLIHEAT ED LE+EA K HST SQAI +G M A+F++L HFSQRYAK+P + D
Sbjct: 676 ATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIPLFSPDF 735
Query: 368 SENVGIAFDNMR 379
+E VGIAFD+M+
Sbjct: 736 NEKVGIAFDHMK 747
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 16 VLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSKFPST 75
V++CP E ++ + F ++Q+ A D ALV H +P ++ RY+++M +F
Sbjct: 304 VVECPDEGFILPICENDTFKRYQAEA---DAPVALVVHIAPESVLIDSRYQQWMERFGPD 360
Query: 76 TQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLS 112
TQHL+LNE+ + HKIQ +L+++ +IFP L+
Sbjct: 361 TQHLILNENCPSVHNLRSHKIQTQLSLIHPDIFPQLT 397
>sp|Q10155|RNZ1_SCHPO Ribonuclease Z 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=trz1 PE=3 SV=1
Length = 809
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 104 DKEIFPMLSDSGFPLLDKGKQVLAIRGPGPDTC----------ILLDCGEGTYSQLVRLY 153
D +I + + S P L + +R P C ILLDCGEGT +L R Y
Sbjct: 497 DIQICTLGTGSAMPSLYRNVSSTYVRIPVDKKCMEDSAISMKNILLDCGEGTLGRLSRQY 556
Query: 154 GSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKP-ECKLTLLAPRQIITWLSVYA 212
G + ++ L +YISH+HADHH G+ V+KAW++ KL + AP Q WL Y+
Sbjct: 557 GDNLKYEIASLRWIYISHMHADHHAGVIGVLKAWTKYSDGRSKLFITAPPQFEFWLLEYS 616
Query: 213 ARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQ-ILSSLGLESMTTCLVR 271
R+ L L N + + + AL+ + + L S T
Sbjct: 617 ----------RIDYLPLSNIVFISNSALRTDRKPSALESSRLSSLFKEFDLVSFRTVPAI 666
Query: 272 HCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHS 331
HCP ++ + + SG KI YSGDT P + +I K+S LLIHEAT ED + + A K HS
Sbjct: 667 HCPYSYCMEITNSSGWKIAYSGDTRPSEDFANIAKDSTLLIHEATLEDSMHEIAIKKQHS 726
Query: 332 TVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSE-NVGIAFDNM 378
T S+A+ + ++ K V+LTHFSQRY KLP ++ + ++ +AFD M
Sbjct: 727 TYSEALEVAKKAGTKNVILTHFSQRYPKLPDIDISTEDLHIALAFDGM 774
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 12 SSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSK 71
SS ++ CP+E +D ++ ++ K V H + +PRY+ ++S
Sbjct: 326 SSFFIIHCPNELVIDLVI--------ENHKWTNAPKPVCVIHSVTPEVYKNPRYQSWISS 377
Query: 72 FPSTTQHLVLN-ESNECQGSTAVHKIQCKLNILDKEIFPM 110
FPS HL+ + E NE LN+LD ++FP+
Sbjct: 378 FPSEVSHLIASTEVNEVINYPRSAVAIATLNLLDSKVFPL 417
>sp|O44476|RNZ_CAEEL Ribonuclease Z OS=Caenorhabditis elegans GN=hoe-1 PE=2 SV=2
Length = 833
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 148/265 (55%), Gaps = 20/265 (7%)
Query: 134 DTCILLDCGEGTYSQLVRLYG-SAVDTLLSQLSAVYISHLHADHHLGLFSVI----KAWS 188
++ IL+D GEGTY Q+ ++G LL L+ V I+H H DH GL+++I +A+
Sbjct: 520 NSAILIDVGEGTYGQMRAVFGEDGCKQLLVNLNCVLITHAHQDHMNGLYTIIARRKEAFE 579
Query: 189 RV-KPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFN-TKGLIEGTEQHGQNR 246
+ P L L+ R ++ + Y+ FE++ HL +V +S + T G + R
Sbjct: 580 SLGAPYRPLVLVCNRNVLKPMKTYSICFENIEHLLEIVDISRYPLTPPGSPGGPPGKRPR 639
Query: 247 ---PALDP--DTVQILSS------LGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDT 295
P L P D +Q +SS L+ + V H A G M +G +I +SGDT
Sbjct: 640 LPSPHLPPSRDVLQDMSSSFDKKAWKLDELKAVQVHHTRMANGFVMRV-AGKRIVFSGDT 698
Query: 296 MPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQ 355
PCD LV GK++D+L+HE+T ED E +A K HST+ QA+ +G+ M AK ++LTHFS
Sbjct: 699 KPCDLLVEEGKDADVLVHESTFEDGHEADAMRKRHSTMGQAVDVGKRMNAKHIILTHFSA 758
Query: 356 RYAKLPRLNKDLS-ENVGIAFDNMR 379
RY K+P L + L EN+G+A D +R
Sbjct: 759 RYPKVPVLPEYLDKENIGVAMDMLR 783
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 16 VLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSKF--P 73
V +C +ED++ +L+ S +N + + + H S +++ P Y+ M K P
Sbjct: 319 VTECTTEDHVKALIDSSSLQPF----LNGEKQLDYMVHISDDAVINTPTYRHLMEKLNNP 374
Query: 74 STTQHLVLNESNECQGST-AVHKIQCKLNILDKEIFPML 111
S T HL++N N + +V+K L + +FP L
Sbjct: 375 SIT-HLLINGGNPVIPAVESVYKHTRLLRSIAPSLFPAL 412
>sp|P36159|RNZ_YEAST Ribonuclease Z OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRZ1 PE=1 SV=1
Length = 838
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 147/285 (51%), Gaps = 44/285 (15%)
Query: 137 ILLDCGEGTYSQLVRLYGS-AVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPE-- 193
I+LD GE T + R++ AV ++ L +Y+SHLHADHHLG+ SV+ W + +
Sbjct: 505 IMLDAGENTLGTIHRMFSQLAVKSIFQDLKMIYLSHLHADHHLGIISVLNEWYKYNKDDE 564
Query: 194 -CKLTLLAPRQ----IITWLSVYA------ARFESVGHLY---------RLVPLSLFNTK 233
+ ++ P Q + WL + ++ S H + VPL+ FN +
Sbjct: 565 TSYIYVVTPWQYHKFVNEWLVLENKEILKRIKYISCEHFINDSFVRMQTQSVPLAEFN-E 623
Query: 234 GLIEGTEQHGQNRPALDPDTV--------QILSSLGLESMTTCLVRHCPNAFGVTMVTK- 284
L E + Q + LD D+ Q+ L +E TC HC A+ ++ +
Sbjct: 624 ILKENSNQESNRKLELDRDSSYRDVDLIRQMYEDLSIEYFQTCRAIHCDWAYSNSITFRM 683
Query: 285 ------SGHKITYSGDTMPCDALVS--IGKNSDLLIHEATHEDELEKEAALKMHSTVSQA 336
+ K++YSGDT P S IG NSDLLIHEAT E++L ++A K H T+++A
Sbjct: 684 DENNEHNTFKVSYSGDTRPNIEKFSLEIGYNSDLLIHEATLENQLLEDAVKKKHCTINEA 743
Query: 337 IRIGREMRAKFVLLTHFSQRYAKLPRLNKD---LSENVGIAFDNM 378
I + +M A+ ++LTHFSQRY KLP+L+ + ++ AFD+M
Sbjct: 744 IGVSNKMNARKLILTHFSQRYPKLPQLDNNIDVMAREFCFAFDSM 788
>sp|P87168|RNZ2_SCHPO Ribonuclease Z 2, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=trz2 PE=3 SV=1
Length = 678
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 26/233 (11%)
Query: 126 LAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIK 185
+AI G T I+LDCGEG SQ R YG+ + +L +L A++I+HLH+DH+LGL +V++
Sbjct: 431 VAIDG----TVIMLDCGEGAISQFFRQYGTNTEPMLRKLKAIFITHLHSDHYLGLLNVLQ 486
Query: 186 AWSRVKPE--CKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHG 243
AW++ + ++ P+ + WL R +S +L L+ +F I E
Sbjct: 487 AWNKANTNNSMHINIIGPKFLWQWLQ----RLKSPANLQALLNRIIF-----IIAKETVT 537
Query: 244 QNRPALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVS 303
++ + S+ + +C++ H TK G K+ YSGDT P + LV
Sbjct: 538 TPLQLTSDLSISSVPSIHINDSYSCIISH----------TKYG-KLVYSGDTRPNEKLVK 586
Query: 304 IGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQR 356
G + LL+HE+T ED+L+ EA + HST S+A+ + + M+AK ++LTHFSQR
Sbjct: 587 AGIGASLLLHESTFEDDLKHEAIQRQHSTASEALSVAQSMKAKALILTHFSQR 639
>sp|Q8TLK5|RNZ_METAC Ribonuclease Z OS=Methanosarcina acetivorans (strain ATCC 35395 /
DSM 2834 / JCM 12185 / C2A) GN=rnz PE=3 SV=1
Length = 305
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
+L DCGEGT Q++R T + LS++++SH HADH LG+ +I+ S + + L
Sbjct: 32 MLFDCGEGTQQQMMR-----AKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFMGRKDPL 86
Query: 197 TLLAP------RQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALD 250
+ P ++ L + ++E H L P + +G + + + P+L
Sbjct: 87 MIYGPAGTREFTELFKALGYFNLKYEI--HGMELKPGDVVEGEGYVVRALETEHSTPSLG 144
Query: 251 PDTVQ----------ILSSLGLES--MTTCLVRHCPNAFGVTMV--------TKSGHKIT 290
++ +LG+ + + L + P G +V + G I
Sbjct: 145 YALIENPRPGRFNREKAVALGVPPGPLFSKLQKGNPVEAGGKVVRPEEVMGTPRPGRTIV 204
Query: 291 YSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLL 350
YSGDT PC+A++ +++DLLIH+ + DE+ + A MHST + + +E + ++L
Sbjct: 205 YSGDTRPCEAVLEASRDADLLIHDGSFADEMAEWAEESMHSTAGEVAALAKEAGVRKLVL 264
Query: 351 THFSQRYAK----LPRLNKDLSENVGIAFDNMRF 380
TH S RY + + +K + ENV +A D M
Sbjct: 265 THISSRYTDDVEPILKDSKKVFENVIVAEDLMEL 298
>sp|O29323|RNZ_ARCFU Ribonuclease Z OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16
/ DSM 4304 / JCM 9628 / NBRC 100126) GN=rnz PE=3 SV=1
Length = 306
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 49/278 (17%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
+L DCGEGT Q++ T L ++I+HLH DH +GLF +I+ S + +L
Sbjct: 33 MLFDCGEGTQRQMM-----IAKTGFRNLDNIFITHLHTDHFIGLFGLIETMSLNERSREL 87
Query: 197 TLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQI 256
+ +PR V A FE+ G Y + + + L +G E + T I
Sbjct: 88 NVYSPRA-----EVLRALFEAFG--YDQLNYDI-RVRELKDGEEVKFDGFKVVAFRTEHI 139
Query: 257 LSSLG---LES---------------------MTTCLVRHCPNAFGVTMVT--------K 284
+ S+G +E+ + L R + +T +
Sbjct: 140 VKSVGYAIIENDRRGKFNREKAEKELGIPPGPLYAKLARGESIVWKGRTITPDMVLGEKR 199
Query: 285 SGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMR 344
G K+ Y+GD+ P V I +N+D+LIH+A+ ++EL+ A HST +A + RE
Sbjct: 200 RGRKVVYTGDSRPTKRTVEIARNADILIHDASFKEELKDWAIESGHSTAKEAAEVAREAN 259
Query: 345 AKFVLLTHFSQRYAK----LPRLNKDLSENVGIAFDNM 378
K ++LTH S RY+K L K + EN IA D M
Sbjct: 260 VKKLILTHISTRYSKDASPLLEEAKKVFENTIIAEDFM 297
>sp|B7K1N1|RNZ_CYAP8 Ribonuclease Z OS=Cyanothece sp. (strain PCC 8801) GN=rnz PE=3 SV=1
Length = 314
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 40/319 (12%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
EI + + SG P + +A+R P L DCGEGT QL+R D +SQ++
Sbjct: 2 EITFLGTSSGVPTRSRNVSSVALRLPQRAEVWLFDCGEGTQHQLLR-----SDVKISQIT 56
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVG-----H 220
++I+H+H DH GL ++ + + + P +I +L A++ V
Sbjct: 57 RIFITHMHGDHIYGLMGLLASCGLAGNAQDIEIYGPPDLIDYLKA-CAKYSQVKLSHRVR 115
Query: 221 LYRLVPLSLFNTK------GLIE------GTEQHGQNRP---------ALDPDTVQILSS 259
+Y + P L+ + GL++ G +NRP AL I
Sbjct: 116 VYGVRPGILYEDEEFTVSCGLLKHRIPAFGYRIAEKNRPGRFDVEKATALGIPPGPIYGQ 175
Query: 260 LGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHED 319
L + T N + T++G K+ Y DT+ CD V + ++ D+LIHEAT
Sbjct: 176 LKRGEVVTLPDGRRINGKDLCGETETGRKVIYCTDTVFCDGAVELAQDGDVLIHEATFAH 235
Query: 320 ELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYA--KLPRLNKDLSE------NV 371
+ + A ++HST + A ++ K +++THFS RYA + +L+ L+E N
Sbjct: 236 QDAQLAFDRLHSTSTMAAQVALIAGVKQLIMTHFSPRYAPGNVLQLDDLLAEAKAIFANT 295
Query: 372 GIAFDNMRFPEKKKKKKKK 390
+A D M + + ++K +
Sbjct: 296 ILARDFMTYEVPRLRRKTE 314
>sp|Q8Q032|RNZ_METMA Ribonuclease Z OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM
3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=rnz PE=3 SV=1
Length = 305
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 37/274 (13%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
+L DCGEGT Q++R T + LS++++SH HADH LG+ +I+ S + + L
Sbjct: 32 LLFDCGEGTQQQMMR-----AKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFLGRKEPL 86
Query: 197 TLLAPRQIITWLSVYAA------RFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALD 250
T+ P + V+ ++E G L P + K + + + P+L
Sbjct: 87 TIYGPEGTKEFTEVFKVLGYCNLKYEVRG--VELSPGDIVEGKNYVVRALKTEHSTPSLG 144
Query: 251 PDTV----------QILSSLGL--ESMTTCLVRHCPNAFGVTMV--------TKSGHKIT 290
+ + LG+ + L + P +V + G +
Sbjct: 145 YSLIENPRPGRFNREKAVELGVLPGPLFAKLQKGNPVEVNGKLVKPEEVVGAPRPGRTVV 204
Query: 291 YSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLL 350
YSGDT PC+A++ +++D+LIH+ + DE+ A MHST + + +E + ++L
Sbjct: 205 YSGDTRPCEAVLEASRDADVLIHDGSFADEMAGWAEESMHSTAGEVASLAKEAGVRQLVL 264
Query: 351 THFSQRYAK--LPRLN--KDLSENVGIAFDNMRF 380
TH S RY P LN + + ENV +A D M
Sbjct: 265 THISSRYTDDVGPILNDSRKVFENVIVAEDLMEL 298
>sp|Q97Z88|RNZ_SULSO Ribonuclease Z OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM
1617 / JCM 11322 / P2) GN=rnz PE=3 SV=1
Length = 291
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 35/287 (12%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
+IF + + +G P + +R G + ILLDCGEGT L+ Y ++++
Sbjct: 3 QIFFLGTGAGSPSKKRKLPAFLVRREGVN--ILLDCGEGTQYTLMN-YKLGINSI----K 55
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLV 225
+ ISH+H DH GL VI + + + L +L PR++ +L + + +++
Sbjct: 56 IIGISHMHGDHVFGLLGVIASMGLLDRKETLYILGPRKLKDFLYT-SFEYSKFNPSFKIE 114
Query: 226 PLSLFNTKGLIEGTEQ-----HGQNRPALDPDTVQI-LSSLGLESMTTC-LVRHCPNAFG 278
+ +N + + T + Q ++ D V+I L E + ++R
Sbjct: 115 FIDNYNDENITISTFKTCHTIESQGYLIMEKDRVKIDEEKLEKEKIRDWRVIRKLKEGKT 174
Query: 279 VT-----------MVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAAL 327
V +V K G K+ Y+GDTMPC ++V K D+LIH++T D E A
Sbjct: 175 VEYNGKLLKPEDYLVIKRGSKVAYTGDTMPCQSVVDSVKGVDILIHDSTFLD--EPSAYT 232
Query: 328 KMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSENVGIA 374
HS V+ A +I E K + LTH S RY +D+SE++ +A
Sbjct: 233 YGHSNVTDAAKIALEASVKLLALTHISPRY-------EDVSEHLKMA 272
>sp|Q979A8|RNZ_THEVO Ribonuclease Z OS=Thermoplasma volcanium (strain ATCC 51530 / DSM
4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rnz PE=3 SV=2
Length = 304
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Query: 134 DTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPE 193
D L DCGEGT Q+++ S + ++I+H H DH LGL ++++ S
Sbjct: 32 DVFNLFDCGEGTQKQIMKSKWS-----FMSIDNIFITHFHGDHFLGLIGLVQSMSFNNRT 86
Query: 194 CKLTLLAPRQIITWLS------VYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
L + PR I +S Y RF ++Y L P ++ + T + P
Sbjct: 87 KDLNIFGPRGAIGIISNAINIGYYTLRFRI--NVYELEPDKTYDLGKFLLKTTLNDHPVP 144
Query: 248 AL-----DPDTVQI----LSSLGLESMTTCLVR------HCPNAFGVTMVT---KSGHKI 289
AL + D +++ LG+ S +R + + + ++ + G KI
Sbjct: 145 ALSYTIEEKDIIRVDPQKAKELGIPSKIIEKIRDNGTYEYRGRKYSIDEISGGIRKGRKI 204
Query: 290 TYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVL 349
Y+GDT P + K++D+LIH+ T + E HS+ QA RI R+ +
Sbjct: 205 VYTGDTKPMQKMADFAKHADVLIHDTTTDSSFEPAVNQFGHSSAKQAARIARDAGVSRLF 264
Query: 350 LTHFSQRYAKLPRLNKD 366
L H+S R + L D
Sbjct: 265 LYHYSPRITDVSPLVDD 281
>sp|Q9HJ19|RNZ_THEAC Ribonuclease Z OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=rnz PE=3
SV=2
Length = 307
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 31/247 (12%)
Query: 134 DTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPE 193
D L DCGEGT Q+++ S +D + ++I+H H DH LGL ++++ S
Sbjct: 32 DVLNLFDCGEGTQKQIMKSSTSFMD-----IDNIFITHFHGDHFLGLLGLVQSMSFNNRT 86
Query: 194 CKLTLLAPRQIITWLS------VYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRP 247
+L + P I LS Y F +Y L P ++ + T + P
Sbjct: 87 KQLNIFGPHGAIKILSNALNVGYYTLHFPL--KIYELEPDRTYDLGKFLIRTMLNDHPVP 144
Query: 248 AL------------DPDTVQ---ILSSLGLESMTTCLVRHCPNAFGVTMV---TKSGHKI 289
AL DP+ + I S + + + N + + + + G +I
Sbjct: 145 ALSYSIEERDLVRIDPEKAREKNIPSRIIEKIRENGSYVYKGNEYRIDDIAGGVRKGRRI 204
Query: 290 TYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVL 349
Y+GDT P D ++ +N+D+LIH+ T + E HS+ QA RI R+ R +
Sbjct: 205 VYTGDTRPMDRMIEFARNADVLIHDTTTDSSFEPMVNEFGHSSSRQAARIARQARVGRLY 264
Query: 350 LTHFSQR 356
L H+S R
Sbjct: 265 LYHYSPR 271
>sp|Q118J2|RNZ_TRIEI Ribonuclease Z OS=Trichodesmium erythraeum (strain IMS101) GN=rnz
PE=3 SV=1
Length = 321
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 115/276 (41%), Gaps = 38/276 (13%)
Query: 112 SDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISH 171
+ SG P + +A+R P L DCGEGT Q +R D +SQLS ++I+H
Sbjct: 8 TSSGVPTRSRNVSSIALRLPQRAELWLFDCGEGTQHQFLR-----SDLKVSQLSRIFITH 62
Query: 172 LHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFN 231
+H DH GL ++ + +TL P + +L R+ Y P+ +
Sbjct: 63 MHGDHVFGLMGLLASCGLGGNVKSVTLYGPPALEDYLQA-GLRYSQTHLAY---PIKVHK 118
Query: 232 TK-GLIEGTEQH-------------------GQNRP---------ALDPDTVQILSSLGL 262
+K G+I +++ ++RP AL I L
Sbjct: 119 SKPGVIYEDDEYVVSCAYLKHRVTAFGYRVTEKDRPGHFNVEKAKALGIPPGPIYRKLKQ 178
Query: 263 ESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELE 322
T N + G K Y DT+ CD V + + +DLL+HEAT +
Sbjct: 179 GEFVTLPDGRKINGADLCGAPHVGRKFVYCTDTVFCDGAVELSQGADLLVHEATFSHQDA 238
Query: 323 KEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYA 358
+ A ++HST + A ++ K +++THFS RYA
Sbjct: 239 EMAFQRLHSTSTMAAQVALAAGVKHLMMTHFSPRYA 274
>sp|O27859|RNZ_METTH Ribonuclease Z OS=Methanothermobacter thermautotrophicus (strain
ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta
H) GN=rnz PE=3 SV=1
Length = 307
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 46/285 (16%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
E+ + + S P ++ +A+R PG L DCGEGT Q+ S + +++
Sbjct: 3 EVTFLGTSSAVPSKNRNHTSIALRIPG--EIFLFDCGEGTQRQMALAGISPM-----KVT 55
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQI------ITWLSVYAARFESVG 219
++I+HLH DH LG+ +I++ E L + P I I + + F+
Sbjct: 56 RIFITHLHGDHILGIPGMIQSMGFRGREEPLDIYGPPGIHELHECIMKMGYFTLDFDINV 115
Query: 220 HL-----------YRLVPL----SLFNTKGLIEGTEQHGQNRPALDPDTVQILSSLGLES 264
H YR+ S+FN E + RP + +LGL+
Sbjct: 116 HEVRGGTVVEEDDYRVTSAPASHSVFNLAYCFEE-----KKRPRFLREKA---IALGLKP 167
Query: 265 MTTC--LVRHCPNAFGVTMVT--------KSGHKITYSGDTMPCDALVSIGKNSDLLIHE 314
L R P G ++ + G K+ YSGDT PC++++ + + ++LLIHE
Sbjct: 168 GPAFGKLHRGIPVRVGDRIIMPEEVLGSPRKGVKVCYSGDTRPCESVIKLAEGAELLIHE 227
Query: 315 ATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAK 359
+T E E +AA HST +A + R K ++LTH S RY +
Sbjct: 228 STLEAGSEDKAAESGHSTAREAAEVARSAGVKRLILTHLSTRYKR 272
>sp|Q71Y44|RNZ_LISMF Ribonuclease Z OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=rnz PE=3 SV=1
Length = 306
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 134 DTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPE 193
+T L DCGE T Q++R S + LS+L ++I+H+H DH GL ++ + S +
Sbjct: 31 NTIWLFDCGEATQHQIMR---SQIK--LSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGD 85
Query: 194 CKLTLLAPRQIITWLSV----------YAARFESV--GHLYR----LVP-------LSLF 230
LT+ P I ++ Y FE + G ++ LV + F
Sbjct: 86 SNLTIYGPAGIAEYVETSLRLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHGVRSF 145
Query: 231 NTKGLIEGTEQHGQNRPALDPDTVQ---ILSSLGLESMTTCLVRHCPNAFGVTMVTKSGH 287
+ ++E +Q N L D V+ + L + T + + G
Sbjct: 146 GYR-IVEKDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGK 204
Query: 288 KITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKF 347
I+ GDT + + N+D+L+HEAT E + K A MHST QA + + K
Sbjct: 205 IISIFGDTKETANELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKTANVKK 264
Query: 348 VLLTHFSQRYAK-----LPRLNKDLSENVGIAFDNMRFP 381
++LTH S RY + L K + EN IA+D FP
Sbjct: 265 LILTHISSRYDRDASKELLIEAKTIFENTEIAYDLAVFP 303
>sp|C1KWS1|RNZ_LISMC Ribonuclease Z OS=Listeria monocytogenes serotype 4b (strain
CLIP80459) GN=rnz PE=3 SV=1
Length = 306
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 134 DTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPE 193
+T L DCGE T Q++R S + LS+L ++I+H+H DH GL ++ + S +
Sbjct: 31 NTIWLFDCGEATQHQIMR---SQIK--LSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGD 85
Query: 194 CKLTLLAPRQIITWLSV----------YAARFESV--GHLYR----LVP-------LSLF 230
LT+ P I ++ Y FE + G ++ LV + F
Sbjct: 86 SNLTIYGPAGIAEYVETSLRLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHGVRSF 145
Query: 231 NTKGLIEGTEQHGQNRPALDPDTVQ---ILSSLGLESMTTCLVRHCPNAFGVTMVTKSGH 287
+ ++E +Q N L D V+ + L + T + + G
Sbjct: 146 GYR-IVEKDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGK 204
Query: 288 KITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKF 347
I+ GDT + + N+D+L+HEAT E + K A MHST QA + + K
Sbjct: 205 IISIFGDTKETANELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKTANVKK 264
Query: 348 VLLTHFSQRYAK-----LPRLNKDLSENVGIAFDNMRFP 381
++LTH S RY + L K + EN IA+D FP
Sbjct: 265 LILTHISSRYDRDASKELLIEAKTIFENTEIAYDLAVFP 303
>sp|Q3IRM5|RNZ_NATPD Ribonuclease Z OS=Natronomonas pharaonis (strain DSM 2160 / ATCC
35678) GN=rnz PE=3 SV=1
Length = 308
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
+L DCGEGT Q++R +G+ +S +I+HLH DH LGL +++ E L
Sbjct: 33 MLFDCGEGTQRQMMR-FGTGF-----AVSKAFITHLHGDHILGLPGLLQTMDFNDREEPL 86
Query: 197 TLLAPR-----------------------------QIITWLSVYAARFESVGHLYRLVPL 227
++ P Q++ Y R H R +
Sbjct: 87 SVYVPSGKQAELRDLIDTAAGAPSFPVHVNGVSDGQVVVDADDYEIRAFETDHDARSLGY 146
Query: 228 SLFNT--KGLIEGTEQHGQNRPALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKS 285
+L KG + P + P Q+ + +E +V P V +
Sbjct: 147 ALIEASRKGRFDRERAEELGVP-VGPKFQQLHAGEAVELEDGTVVE--PEQ--VVGDPRP 201
Query: 286 GHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRA 345
G ++ Y+GDT P D V++ +N+DLLIH+AT + AA HST ++A I A
Sbjct: 202 GRRVVYTGDTRPTDRTVTVAENADLLIHDATFATDNADRAARTAHSTAAEAADIASRADA 261
Query: 346 KFVLLTHFSQRYAKLP 361
+ + L H S RYA P
Sbjct: 262 RRLALVHISSRYAGDP 277
>sp|Q8Y5S8|RNZ_LISMO Ribonuclease Z OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=rnz PE=3 SV=1
Length = 306
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 115/273 (42%), Gaps = 35/273 (12%)
Query: 134 DTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPE 193
+T L DCGE T Q++R S + LS+L ++I+H+H DH GL ++ + S +
Sbjct: 31 NTIWLFDCGEATQHQIMR---SQIK--LSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGD 85
Query: 194 CKLTLLAPRQII----TWLSVYAARFESVGHLYRLVPLSLFNTKGLI------------- 236
LT+ P I T L + R + + P +F K I
Sbjct: 86 SNLTIYGPAGIAEYVETSLRLSGTRLTYKINFEEIEPGVIFEDKMFIVTADDLDHGVRSF 145
Query: 237 -----EGTEQHGQNRPALDPDTVQ---ILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHK 288
E +Q N L D V+ + L + T + + G
Sbjct: 146 GYRIVEKDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKI 205
Query: 289 ITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFV 348
I+ GDT + + + N+D+L+HEAT E + K A MHST QA ++ + K +
Sbjct: 206 ISIFGDTRETSSELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKL 265
Query: 349 LLTHFSQRYAK-----LPRLNKDLSENVGIAFD 376
+LTH S RY + L K + EN IA+D
Sbjct: 266 ILTHISSRYDRDASKELLIEAKTIFENTEIAYD 298
>sp|B8DBV5|RNZ_LISMH Ribonuclease Z OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=rnz PE=3 SV=1
Length = 306
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 138 LLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLT 197
L DCGE T Q++R S + LS+L ++I+HLH DH GL ++ + S E LT
Sbjct: 35 LFDCGEATQHQIMR---SQIK--LSKLEKIFITHLHGDHIFGLPGLLSSRSFQGGESDLT 89
Query: 198 LLAPRQIITWLSVYAARFESVGHLYRLV-----PLSLFNTK-----------GL------ 235
+ P I ++ + R Y+++ P +F K GL
Sbjct: 90 IYGPVGITEYVET-SLRLSGTRLTYKIIFNEIEPGLIFEDKMFSITVDELDHGLRSFGYR 148
Query: 236 -IEGTEQHGQNRPALDPDTVQ---ILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITY 291
+E + N L D V+ I + T N + G I+
Sbjct: 149 IVEKDKPGALNADKLIEDGVEPGPIFQKIKKGETVTLADGSVINGKDYIDEPQKGKIISI 208
Query: 292 SGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLT 351
GDT + + + N+D+L+HEAT E + EK A MHST QA + ++ K ++LT
Sbjct: 209 FGDTKATASELELALNADVLVHEATFEGDKEKLAGEYMHSTTLQAASLAKKANVKKLILT 268
Query: 352 HFSQRYAK-----LPRLNKDLSENVGIAFDNMRFP 381
H S RY + L + + EN IA+D FP
Sbjct: 269 HISSRYDRDASKELLIEAQSVFENTEIAYDLAVFP 303
>sp|D4GZ88|RNZ_HALVD Ribonuclease Z OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757
/ JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
GN=rnz PE=1 SV=1
Length = 315
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 40/255 (15%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
+L DCGEGT Q++R YG+ +S ++++HLH DH LG+ +I+ + L
Sbjct: 31 LLFDCGEGTQRQMMR-YGTGF-----GVSHLFVTHLHGDHILGIPGLIQTLDFNDRDDSL 84
Query: 197 TLLAP-------RQIITW--------LSVYAARFESVGHLYRLVPLSLFNTK-------- 233
+ P Q++ +SV+ R +V + + F+T+
Sbjct: 85 AIHGPPGSKGHLEQLVHAGGYQPGFHVSVHEVRPGNVAYRADDYEVRAFDTEHRTASVGY 144
Query: 234 GLIEGTEQHGQNRPALDPDTVQILSSLG-------LESMTTCLVRHCPNAFGVTMVTKSG 286
L+E +R + V + + G +E +VR + V + G
Sbjct: 145 ALVEDDRPGRFDREKAEELGVPVGPAFGRLHAGEDVELEDGTVVR----SEQVVGDPRPG 200
Query: 287 HKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAK 346
+ Y+GDT P ++ V + ++DLL+H+AT DE + A HST +A R+ R+ +
Sbjct: 201 RTVVYTGDTRPLNSTVEVACDADLLVHDATFTDEEAERAKQTAHSTAREAARVARDADVR 260
Query: 347 FVLLTHFSQRYAKLP 361
LTH S RYA P
Sbjct: 261 RFALTHISARYAADP 275
>sp|A8ABB4|RNZ_IGNH4 Ribonuclease Z OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386
/ JCM 14125) GN=rnz PE=3 SV=1
Length = 300
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 138 LLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLT 197
LLDCGEGT QL++ S S++ V++SHLH DH LGL +++ + +L
Sbjct: 35 LLDCGEGTQFQLMKAKIS-----FSRIKVVFVSHLHGDHVLGLPGLLQTMAMASRRDELL 89
Query: 198 LLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQH--------GQNRPAL 249
++ P+ + +L + FE + + Y P+ + E T ++ PA
Sbjct: 90 VIGPKGLKDFL---LSSFE-LTYFYPPYPIKVVEVLRDAEITYRNLKLKVFPVNHTVPAF 145
Query: 250 DPDT---------VQILSSLGLESMTTCLVRHCPNA------FGVTMVTKSGH--KITYS 292
+L GL ++ + F T G K+ YS
Sbjct: 146 GVSVETASKRKVRADVLEREGLPKRLWGRLQRGEDVVWEGRVFKYEDFTFEGERIKVVYS 205
Query: 293 GDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTH 352
GDT PC+ LV + +DLL+HEAT EL++EA + HST A K +L+ H
Sbjct: 206 GDTAPCERLVEEAEGADLLVHEATFTKELKEEAHDRGHSTAEDAATAAARAGVKQLLMVH 265
Query: 353 FSQRYAKLPR 362
FS RY L R
Sbjct: 266 FSARYKDLRR 275
>sp|C1AAD9|RNZ_GEMAT Ribonuclease Z OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586
/ JCM 11422 / NBRC 100505) GN=rnz PE=3 SV=1
Length = 314
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 60/299 (20%)
Query: 117 PLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADH 176
P +++G +++ G +L DCGEGT Q++R YG + LS V+ +H+H+DH
Sbjct: 15 PTVERGVSAISLTREGE--TLLFDCGEGTQRQMMR-YGVSF-----ALSDVFFTHVHSDH 66
Query: 177 HLGLFSVIKAWS---RVKPECKLTLLAP-------RQII------TWLSVYAARFESV-- 218
LG+ +++ + R +P L L P RQ I T V E+
Sbjct: 67 LLGITGLLRTMALQGRTEP---LRLWTPRSTAKTLRQCINIGGERTTFPVEICELEAGSS 123
Query: 219 ---GHLYRLVPLSLFNTKGLIEGTEQHG------QNRPALDPDTVQILSSLGLES--MTT 267
G YR+ ++ + GT G + R +PD + LG+ +
Sbjct: 124 VKRGEDYRIDTFAVDH-----RGTASLGYAIVEEERRGRFNPDLAR---ELGIPEGPLWG 175
Query: 268 CLVRHCPNAFGVTMVTKS---------GHKITYSGDTMPCDALVSIGKNSDLLIHEATHE 318
+ R P V +S G +I +GDT PCD ++ +++DLLIHE+T
Sbjct: 176 RIHRGEPIMLDDGRVIESSVLVGERRRGRRIVITGDTRPCDGTLAAAQDADLLIHESTFA 235
Query: 319 DELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSENVGIAFDN 377
DE A HST +A I + + ++LTH S RY+ R +DL + F N
Sbjct: 236 DEEGARAQETGHSTAREAAEIALKAGVRRLVLTHISARYS---RDTRDLEQEARSVFPN 291
>sp|B1WQW1|RNZ_CYAA5 Ribonuclease Z OS=Cyanothece sp. (strain ATCC 51142) GN=rnz PE=3
SV=1
Length = 312
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 34/280 (12%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
EI + + SG P + +A+R P L DCGEGT QL+R D +SQ++
Sbjct: 2 EITFLGTSSGVPTRSRNVSSVALRLPQRAEVWLFDCGEGTQHQLLR-----SDVKISQIT 56
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYA----------ARF 215
++++H+H DH GL ++ + + + P ++ +L A RF
Sbjct: 57 RIFVTHMHGDHIYGLTGLLASCGLAGSGQPIEIYGPPELKDYLKACAKYSHFKLPHHIRF 116
Query: 216 ESV--GHLYR----LVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQILSSLG-------- 261
+ G LY V +L + G +RP V+ SLG
Sbjct: 117 HPIHPGILYEDAEFSVSCNLLKHRIPAYGYRIAESDRPGRF--NVEKAKSLGIPPGPVYG 174
Query: 262 -LESMTTCLVRHCPNAFGVTMVTK--SGHKITYSGDTMPCDALVSIGKNSDLLIHEATHE 318
L+ T + N G + + +G K+ Y DT+ C+ +++ +++D+LIHEAT
Sbjct: 175 ELKQGKTVTLPDGRNIRGQDLCGERETGRKVIYCTDTVFCEGAIALSEDADVLIHEATFA 234
Query: 319 DELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYA 358
+ + A ++HST + A ++ + K +++THFS RYA
Sbjct: 235 HQDAQLAFDRLHSTSTMAAQVALAAQVKQLIMTHFSPRYA 274
>sp|B1VY42|RNZ_STRGG Ribonuclease Z OS=Streptomyces griseus subsp. griseus (strain JCM
4626 / NBRC 13350) GN=rnz PE=3 SV=1
Length = 304
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
IL D GEGT Q++R +A D + + ++H H DH LGL VI+ + + +
Sbjct: 34 ILFDPGEGTQRQMLRAGVAAHD-----IHRICVTHFHGDHSLGLAGVIQRINLDQVPHPV 88
Query: 197 TLLAP---RQIITWLSVYAARFESV----------GHLYRLVPLSLFNTKGLIEGTEQHG 243
T P + L A E+V G + P ++ L E +G
Sbjct: 89 TAHYPASGQHFFERLRYATAYRETVELNQAPVAGAGGVLAATPAYTLDSAKLSHPVESYG 148
Query: 244 QNRPALDPDTVQILSSL----GLESMTTCLVRHCPNAFGVTMVTKS----GHKITYSGDT 295
+PDT ++L +L G+ ++ GVT+ S G + + DT
Sbjct: 149 YR--LTEPDTRRMLPALLREHGIAGPDVGRLQRDGVLGGVTLEQVSEERRGQRFAFVMDT 206
Query: 296 MPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQ 355
CD + ++ + SD+L+ E+T DE EK A H T QA R+ RE + ++LTHFSQ
Sbjct: 207 RLCDGVYALAEGSDMLVIESTFLDEDEKLAVDHGHLTAGQAARVARESGVRHLVLTHFSQ 266
Query: 356 RYAKLPRLNKDLSENVG------IAFDNMRFP 381
RY P + + + G +A D +R P
Sbjct: 267 RYGD-PEIFETQARAAGFDGELTVAQDLIRVP 297
>sp|B0JGG3|RNZ_MICAN Ribonuclease Z OS=Microcystis aeruginosa (strain NIES-843) GN=rnz
PE=3 SV=1
Length = 318
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 48/321 (14%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
EI + + SG P + +A+R P L DCGEGT QL+R D SQ+
Sbjct: 2 EITFLGTSSGVPTRSRNVSSIALRLPQRAEIWLFDCGEGTQHQLLR-----SDLKSSQIR 56
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYA----------ARF 215
++I+H+H DH GL ++ + + + P + +L A R
Sbjct: 57 RIFITHMHGDHIFGLMGLLASIGLAGSAQDIDIYGPPGLGDYLRACAKYSYTNLANRVRV 116
Query: 216 ESV--GHLYR----LVPLSLFNTKGLIEGTEQHGQNRPA-LDPDTVQILSSLG------- 261
++ G LY V L + G ++RP D V+ ++LG
Sbjct: 117 HAISPGILYEDEEFTVSCQLLKHRIPAHGYRIAEKDRPGRFD---VEKANALGIPPGPIY 173
Query: 262 --LESMTTCLVRHCPNAFGVTMV--TKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATH 317
L+ T + G ++ T+ G KI Y DT+ C+ + + +N+D+LIHEAT
Sbjct: 174 GKLKKGETVTLPDGSKIRGQSLCGETEIGRKIAYCTDTIFCEGSIELAQNADVLIHEATF 233
Query: 318 EDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSE-------- 369
+ A +HST + A ++ + K +L+THFS RY LP + D+S
Sbjct: 234 AHQDAGLAFESVHSTSTMAAQVALAAQVKLLLMTHFSPRY--LPGNSLDISNLLEEARAI 291
Query: 370 --NVGIAFDNMRFPEKKKKKK 388
N +A+D + + + +++
Sbjct: 292 FPNTKLAYDFLTYEVPRNRQE 312
>sp|Q6KZJ4|RNZ_PICTO Ribonuclease Z OS=Picrophilus torridus (strain ATCC 700027 / DSM
9790 / JCM 10055 / NBRC 100828) GN=rnz PE=3 SV=1
Length = 309
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 27/264 (10%)
Query: 122 GKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLF 181
G+ + AI + L DCGEGT Q ++ S V + + ++ISH H DH GL
Sbjct: 20 GRGLPAIAVQVDNIVNLFDCGEGTQKQFMK---SGVSFM--NVKNIFISHFHGDHFFGLP 74
Query: 182 SVIKAWSRVKPECKLTLLAP-------RQIITWLSVYAARFESVGHL--YRLVPLSLFNT 232
++ +S L + P +++++ + + + + LF+
Sbjct: 75 GLLSTFSFNGRIDDLNIFGPPGTIDEIKKVLSLIDFKITYNIKIAEMEENKKYDFDLFDV 134
Query: 233 KGLIEGTEQHGQNRPALDPDTVQI----LSSLGLESMTTCLVRHCPNAF---------GV 279
+ ++G + + D ++I S+G L+R+ + V
Sbjct: 135 YAIKNDHTKYGYSYKLKEKDLIKINREKADSIGFPKNKLELLRNNGEYYYMGKRYSIWDV 194
Query: 280 TMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRI 339
K G I YSGDT P + ++ N D+LIH++T + +E A HST QA I
Sbjct: 195 ADGIKPGRSIVYSGDTRPFNDMLKFASNCDVLIHDSTMDASIENLANEYGHSTARQAAEI 254
Query: 340 GREMRAKFVLLTHFSQRYAKLPRL 363
+ K + L H+S RY L L
Sbjct: 255 ALKANVKRLFLFHYSSRYNDLNLL 278
>sp|B1YLU8|RNZ_EXIS2 Ribonuclease Z OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=rnz PE=3 SV=1
Length = 301
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 119/289 (41%), Gaps = 57/289 (19%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
E + + + +G P K + V AI P L DCGE T Q++ S + ++S
Sbjct: 2 EFYFLGTGAGMP--SKQRNVSAIALLHPKMTWLFDCGEATQHQMLH---SPIKP--RKVS 54
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLV 225
++I+HLH DH GL I + ++ LT+ P+ I WL A G R
Sbjct: 55 TIFITHLHGDHIFGLPGFISTRAALEGTTLLTIFGPKGIKEWLE---ATLRITGTYLRY- 110
Query: 226 PLSL--------FNTKGL-----------------IEGTEQHGQNRPALDPDTVQILSSL 260
PL + + +G IEG E+ G AL V+ L L
Sbjct: 111 PLDVIEVEAGQTYEQEGFHIHVEALEHRFLAYGYRIEGQEEKG----ALH---VEALKQL 163
Query: 261 GLESMTTCLVRHCPN----AFGVTMVT--------KSGHKITYSGDTMPCDALVSIGKNS 308
G+ S L R F T K G K+ GDT+PC+ + + +
Sbjct: 164 GVPS--GPLYRQIKQKETFVFEGTEYQSTDFLGEPKPGIKLAVLGDTVPCEGSLRLAEKV 221
Query: 309 DLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRY 357
D+L+HEAT D + A HST QA I + K +LLTH S RY
Sbjct: 222 DVLVHEATFADSEQDHAGRFGHSTARQAAEIALKAGVKKLLLTHISARY 270
>sp|Q92A38|RNZ_LISIN Ribonuclease Z OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=rnz PE=3 SV=1
Length = 306
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 37/274 (13%)
Query: 138 LLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLT 197
L DCGE T Q++R + LS+L ++I+H+H DH GL ++ + S + LT
Sbjct: 35 LFDCGEATQHQVLRSH-----IKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSDLT 89
Query: 198 LLAPRQIITWLSV----------YAARFESV--GHLYR----LVP-------LSLFNTKG 234
+ P I ++ Y FE + G ++ LV + F +
Sbjct: 90 IYGPAGIAEYVETSLRLSGTRLTYKINFEEIEPGVIFEDEMFLVTADDLDHGVRSFGYR- 148
Query: 235 LIEGTEQHGQNRPALDPDTVQ---ILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITY 291
++E +Q N L D V+ + L + T + + G I+
Sbjct: 149 IVEKDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISI 208
Query: 292 SGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLT 351
GDT + + + N+D+L+HEAT E + K A MHST QA + + K ++LT
Sbjct: 209 FGDTKETVSELELAMNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKAANVKKLILT 268
Query: 352 HFSQRYAK-----LPRLNKDLSENVGIAFDNMRF 380
H S RY + L K + EN IA+D F
Sbjct: 269 HISSRYDRDASKELLIEAKTVFENTEIAYDLAVF 302
>sp|A4FXT9|RNZ_METM5 Ribonuclease Z OS=Methanococcus maripaludis (strain C5 / ATCC
BAA-1333) GN=rnz PE=3 SV=1
Length = 314
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 47/289 (16%)
Query: 136 CILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLG---LFSVIKAWSRVKP 192
L DCGE T Q++ D +++ ++ISHLH DH LG L I R KP
Sbjct: 30 IFLFDCGENTQRQII-----FTDVSPMKINNIFISHLHGDHVLGIPGLLQSIAFQGRTKP 84
Query: 193 ECKLTLLAPRQIITWL-SVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALD- 250
L + P + + ++ + S+ + + +S ++ +I + P +
Sbjct: 85 ---LNIYGPEETAKMIKNILNVGYHSIDYPINVYEISSKTSEKIISTDNYDVFSFPVVHS 141
Query: 251 -PDTVQILSS-----LGLESMTTCLVRHCPN------------------AFGVTMVTKSG 286
P + + LE + + P+ VT+ K G
Sbjct: 142 VPAVAYVFRQVKKPRMDLEKVNKLGIEIGPDLKRLKDGYNVELNGKIITPEDVTLPPKKG 201
Query: 287 HKITYSGDTMPCDALVSIGKN--SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMR 344
+ YSGDT+P + K +LIHEAT + ++K A +HSTV A+ I +
Sbjct: 202 ICVGYSGDTIPLNEFADFLKELKCTILIHEATFDKTMDKNAKETLHSTVHDALNIAKRSG 261
Query: 345 AKFVLLTHFSQRYAKLPRLNKDLSE--------NVGIAFDNMRFPEKKK 385
A V+LTH S RY +L KD+ E +V IA D M + K K
Sbjct: 262 ANTVILTHISARYDELSAFEKDVVEFKVEHPDLHVLIAEDLMEYSLKGK 310
>sp|Q58897|RNZ_METJA Ribonuclease Z OS=Methanocaldococcus jannaschii (strain ATCC 43067
/ DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rnz
PE=1 SV=2
Length = 317
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 34/258 (13%)
Query: 136 CILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECK 195
L DCGE Q++ S + +++ ++I+HLH DH LG+ ++++ E +
Sbjct: 33 VFLFDCGENIQRQMLFTEVSPM-----KINHIFITHLHGDHILGIPGLLQSMGFFGREKE 87
Query: 196 LTLLAP---RQIIT---WLSVYAARFE-SVGHLYRLVPLSLFNTKG--LIEGTEQHGQ-- 244
L + P ++II L + F V +Y P++++ + +I +HG
Sbjct: 88 LKIFGPEGTKEIIENSLKLGTHYIEFPIKVYEIYTKEPITIYKEENYEIIAYPTEHGIPS 147
Query: 245 --------NRPALDPDTVQILS-SLGLESMTTCLVRHCPNAFG-------VTMVTKSGHK 288
+P LD + + L +G + N +G V + K G
Sbjct: 148 YAYIFKEIKKPRLDIEKAKKLGVKIGPDLKKLKNGEAVKNIYGEIIKPEYVLLPPKKGFC 207
Query: 289 ITYSGDTMPCDALVSIGK--NSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAK 346
+ YSGDT+P + K D+LIHEAT +D + A MHST+ A+ I + K
Sbjct: 208 LAYSGDTLPLEDFGKYLKELGCDVLIHEATFDDSAKDAAKENMHSTIGDAVNIAKLANVK 267
Query: 347 FVLLTHFSQRYAKLPRLN 364
++LTH S RY K N
Sbjct: 268 ALILTHISARYDKEEYFN 285
>sp|O58883|RNZ_PYRHO Ribonuclease Z OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rnz PE=3 SV=1
Length = 307
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 43/253 (16%)
Query: 136 CILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECK 195
IL D GEGT Q+ S + ++ V+I+H H DH+LGL ++I+ S K +
Sbjct: 31 IILFDVGEGTLRQMEIARISPM-----KIKRVFITHFHGDHYLGLPALIQTMSLWKRKDP 85
Query: 196 LTLLAPRQIITWL------SVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPAL 249
L + P T+L +A F+ + H F + HG PAL
Sbjct: 86 LHIYGPEGSSTFLQNLLNSGYFAPSFDILVHEISGKSRLKFKEYEVWAFEVSHGV--PAL 143
Query: 250 -----DPD-----TVQILSSLGLE--------------SMTTCLVRHCPNAFGVTMVTKS 285
+ D ++ + LGLE + +VR VT K
Sbjct: 144 GYVFKEKDKRGNFNLKKIKELGLEPGPWMKELERQKIIEINGKIVR----LLEVTGPKKR 199
Query: 286 GHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRA 345
G K+ YSGDT PCD ++ + LLIHEAT+ +E +++ + H+T+ +A I ++ +A
Sbjct: 200 GAKVVYSGDTEPCDEVIEFSRRGTLLIHEATYVNEEDRKDS--YHTTIEEACEIWKKSKA 257
Query: 346 KFVLLTHFSQRYA 358
+ ++L H S RY+
Sbjct: 258 RKLVLFHRSPRYS 270
>sp|A4YHP1|RNZ_METS5 Ribonuclease Z OS=Metallosphaera sedula (strain ATCC 51363 / DSM
5348) GN=rnz PE=3 SV=1
Length = 291
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 46/249 (18%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
IL+DCGEGT ++R ++++ + ++ + I+HLHADH LGL S+I+ + +L
Sbjct: 31 ILMDCGEGTQITMIR---NSLNIM--NVNVIAITHLHADHVLGLPSLIQTMGMYDRKERL 85
Query: 197 TLLAPRQIITWLSV--------------YAARFESVGHLYRLVPLSLFNTKGLI--EGTE 240
+L P + L+ + + +ES G R+ P F T ++ +G
Sbjct: 86 YILGPEGLKDLLTETFERTYFSPNFPIEFVSSYESQG--IRVRP---FRTCHVVPSQGYL 140
Query: 241 QHGQNRPALDPDTVQILSSLGLESMTTCLV-------RHCPNAFGVT-----MVTKSGHK 288
++ LD + ++ E +T V + P V ++ K G +
Sbjct: 141 VEEKDTANLDAERLR------REGVTDWRVMRMLKEGKEVPWGDRVLKPEDYLIVKRGIR 194
Query: 289 ITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFV 348
I Y+GDT PC+ +++ K DLL+H++T E + +A+ HST ++A + RE K +
Sbjct: 195 IAYTGDTRPCETVINSVKGVDLLLHDSTFEQGI--DASEYGHSTSTEAATVAREAEVKRL 252
Query: 349 LLTHFSQRY 357
L H S RY
Sbjct: 253 ALIHISARY 261
>sp|A7MHT9|RBN_CROS8 Ribonuclease BN OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=rbn PE=3 SV=1
Length = 304
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 138 LLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLT 197
L DCGEGT Q++R + ++ ++I+HLH DH GL ++ + S E L
Sbjct: 35 LFDCGEGTQHQMLRATATP-----GKIEKIFITHLHGDHIFGLPGLLCSRSMAGCETPLE 89
Query: 198 LLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEG------------TEQHG-- 243
+ P+ I ++ R Y L + + L +G E +G
Sbjct: 90 IYGPKGIAEFVET-TLRLSGSWTSYPLNVHEITEGQLLDDGELTVTAYPLTHPVECYGYR 148
Query: 244 ---QNRP-ALDPDTVQILSSL------GLESMTTCLVRHCPNAFGVTMVT--KSGHKITY 291
Q++P ALD ++ + L+ T + G ++ + G KI
Sbjct: 149 IEEQDKPGALDAARLKAAGVMPGPLFQQLKRGETVTLADGRTVCGADYLSAPRPGKKIAI 208
Query: 292 SGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLT 351
GDT P V++ ++ D+++HE T E + ++A + HST QA + R+ AK +L+T
Sbjct: 209 FGDTGPTPQAVTLARDVDVMVHETTLEAAMAEKANGRGHSTTQQAAEVARDAGAKRLLMT 268
Query: 352 HFSQRYA 358
HFS RY+
Sbjct: 269 HFSSRYS 275
>sp|Q9RDE4|RNZ_STRCO Ribonuclease Z OS=Streptomyces coelicolor (strain ATCC BAA-471 /
A3(2) / M145) GN=rnz PE=3 SV=1
Length = 301
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
IL D GEGT Q++R +A D L+ + ++H H DH LGL VI+ + + ++
Sbjct: 34 ILFDPGEGTQRQMLRAGVAAHD-----LNRICVTHFHGDHSLGLAGVIQRINLDRVPHEI 88
Query: 197 TLLAPR---QIITWLSVYAARFESV----------GHLYRLVPLSLFNTKGLIEGTEQHG 243
T PR + L A E+V G L + P + + L E +G
Sbjct: 89 TAHYPRSGQRFFERLRYATAYRETVALTEVPVAADGPLA-VTPAYTLDARRLSHPVESYG 147
Query: 244 QNRPALDPDTVQIL----SSLGLESMTTCLVRHCPNAFGVTM----VTKSGHKITYSGDT 295
+PD ++L ++ G+ ++ + GV + + G + + DT
Sbjct: 148 YR--LTEPDGRRMLPERLAAHGITGPDVGRIQRDGSLGGVALDEVSEVRRGQRFAFVMDT 205
Query: 296 MPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQ 355
C+ + ++ ++SDLL+ E+T DE E A H T QA R+ R+ + ++LTHFSQ
Sbjct: 206 RLCEGVHALAEDSDLLVIESTFLDEDETLATDHGHLTAGQAARVARDAGVRHLVLTHFSQ 265
Query: 356 RYAKLPRLNKD-----LSENVGIAFDNMRFPEKKKK 386
RY+ + + + +A D R P K++
Sbjct: 266 RYSDPEEFGRQARAAGYAGELTVARDLTRVPVPKRR 301
>sp|Q8DKE4|RNZ_THEEB Ribonuclease Z OS=Thermosynechococcus elongatus (strain BP-1)
GN=rnz PE=3 SV=1
Length = 407
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 119/303 (39%), Gaps = 31/303 (10%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLS 165
EI + + SG P + +A+R P L DCGE T QL+R D SQ+
Sbjct: 2 EITFLGTSSGVPTRTRNVSSVALRLPQRKEIWLFDCGEATQHQLLR-----SDLRTSQIR 56
Query: 166 AVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAP----RQIITWLSVYAARFESVGHL 221
++I+H+H DH GL ++ + ++ + P R I + L R +
Sbjct: 57 RIFITHMHGDHIFGLMGLLASCGLAGTVSQIDVYGPPTLDRYIASCLRWSVMRLPYKLQV 116
Query: 222 YRLVPLSLFNTKGLIEGTEQHGQNRPALD--------PDTVQILSSLGLESMTTCLVRHC 273
+ + P +F+ PA P + + L L
Sbjct: 117 HTVEPGEVFSDGEFTVTCRLLHHRVPAFGYRVTEGDRPGRFHVEKAQALGIPFGPLYGQL 176
Query: 274 PNAFGVTM-------------VTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDE 320
+T+ + G + Y DT+ CD+ V + + +D+LIHEAT +
Sbjct: 177 KQGKTITLEDGRTFDGRDFCDPPQRGRSMVYCTDTVFCDSAVELAQQADVLIHEATFSHQ 236
Query: 321 LEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKL-PRLNKDLSENVGIAFDNMR 379
A ++HST + A ++ + K + LTHFS RYA P +DL F N R
Sbjct: 237 EANLAFARLHSTSTMAAQVAAFAQVKLLFLTHFSARYAPGNPVQVEDLLAEAQAIFPNTR 296
Query: 380 FPE 382
+
Sbjct: 297 LAQ 299
>sp|B8HP81|RNZ_CYAP4 Ribonuclease Z OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)
GN=rnz PE=3 SV=1
Length = 320
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 112 SDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISH 171
+ SG P + +A+R P L DCGE T Q++R D LSQ+ ++I+H
Sbjct: 8 TSSGVPTRSRNVSSVALRLPQRAEVWLFDCGEATQHQILR-----SDVRLSQIRRIFITH 62
Query: 172 LHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSV----------YAARFESV--G 219
+H DH GL ++ + ++ + P + +L Y R +V G
Sbjct: 63 MHGDHIFGLMGLLASCGLAGNVSRMDIYGPPGLNKYLEACQRYSQTHFSYPIRVHTVQPG 122
Query: 220 HLYR----LVPLSLFNTKGLIEGTEQHGQNRPA-LDPDTVQILSSLGLESMTTCLVRHCP 274
+Y V + + + G ++RP D VQ +LG+ S L
Sbjct: 123 VIYEDEEFTVSCTALHHRVTAFGYRVSEKDRPGRFD---VQQAVALGIPSGP--LYGQLK 177
Query: 275 NAFGVTMVTKS-------------GHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDEL 321
VT+ G K+ Y DT+ C+ V + ++ D+LIHEAT +
Sbjct: 178 RGEQVTLADGRVIHGQQLCAPPELGRKLAYCTDTIYCEGAVELAQDVDVLIHEATFAHQD 237
Query: 322 EKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYA 358
A ++HST + A ++ AK + LTHFS RYA
Sbjct: 238 ADMAYQRLHSTSTMAAQVALAAAAKRLFLTHFSPRYA 274
>sp|A0AK82|RNZ_LISW6 Ribonuclease Z OS=Listeria welshimeri serovar 6b (strain ATCC 35897
/ DSM 20650 / SLCC5334) GN=rnz PE=3 SV=1
Length = 306
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 135 TCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPEC 194
T L DCGE T Q++R S + LS+L ++I+H+H DH GL ++ + S +
Sbjct: 32 TIWLFDCGEATQHQIMR---SQIK--LSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDS 86
Query: 195 KLTLLAPRQIITWLSVYAARFESVGHLYRLV-----PLSLFNTK---------------- 233
+T+ P I ++ + R Y+++ P +F K
Sbjct: 87 TITIYGPAGIAEYVET-SLRLSGTRLTYKIIFNEIEPGLIFEDKMFSVIADDLEHGVRSF 145
Query: 234 --GLIEGTEQHGQNRPALDPDTV------QILSSLGLESMTTCLVRHCPNAFGVTMVTKS 285
++E +Q N L + + Q L + + + V N G +
Sbjct: 146 GYRIVEKDKQGALNAEKLKAEGIEAGPIFQKLKNGEVVELEDGRVVDGKNYIGEP---QK 202
Query: 286 GHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRA 345
G I+ GDT + + + N+D+L+HEAT E + K A MHST QA + ++
Sbjct: 203 GKIISIFGDTKETASELELALNADILVHEATFEGDKGKMAGEYMHSTTLQAANLAKKANV 262
Query: 346 KFVLLTHFSQRYAK-----LPRLNKDLSENVGIAFDNMRF 380
K ++LTH S RY + L K + EN IA+D F
Sbjct: 263 KKLILTHISSRYDRDASKALLIEAKSVFENTEIAYDLAVF 302
>sp|A6VFJ7|RNZ_METM7 Ribonuclease Z OS=Methanococcus maripaludis (strain C7 / ATCC
BAA-1331) GN=rnz PE=3 SV=1
Length = 310
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 39/265 (14%)
Query: 136 CILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLG---LFSVIKAWSRVKP 192
L DCGE T Q++ D +++ ++ISHLH DH LG L I R KP
Sbjct: 30 IFLFDCGENTQRQII-----FTDVSPMKINNIFISHLHGDHILGIPGLMQSIAFQGRTKP 84
Query: 193 ECKLTLLAPRQIITWL-SVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALD- 250
L + P++ + ++ + S+ + + +S + + +I + P +
Sbjct: 85 ---LNIYGPKETAKMIENILNVGYHSIDYPINVYEISAKSPEKIISSDNYEVFSFPVVHS 141
Query: 251 -PDTVQILSS-----LGLESMTTCLVRHCPN------AFG------------VTMVTKSG 286
P + + LE + + P+ F VT+ K G
Sbjct: 142 VPALAYVFKQVKKPRMDLEKVNKLGIEIGPDLKRLKDGFNIELNGKIITPDDVTVPPKKG 201
Query: 287 HKITYSGDTMPCDALVSIGKN--SDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMR 344
+ YSGDT+P + K LIHEAT + ++K A +HSTVS A+ I +
Sbjct: 202 ICVGYSGDTIPLNEFAEFLKELKCTTLIHEATFDKSMDKNAKETLHSTVSDALNIAKLSG 261
Query: 345 AKFVLLTHFSQRYAKLPRLNKDLSE 369
V+LTH S RY ++ KD+ E
Sbjct: 262 VNTVILTHISARYDEISAYEKDIVE 286
>sp|A9VG79|RNZ_BACWK Ribonuclease Z OS=Bacillus weihenstephanensis (strain KBAB4) GN=rnz
PE=3 SV=1
Length = 307
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 133/319 (41%), Gaps = 53/319 (16%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAI-------RGPGPDTCILLDCGEGTYSQLVRLYGSAVD 158
E + + +G P KG+ V AI RG L DCGE T Q++
Sbjct: 2 EFVFLGTGAGVP--SKGRNVSAIALQLLEERG----QTWLFDCGEATQHQILH-----TS 50
Query: 159 TLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESV 218
++ ++I+HLH DH GL ++ + S KLT+ P+ I ++ V A S
Sbjct: 51 VRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTKLTVYGPKGIKQFIEV--ALLVST 108
Query: 219 GHL-YRLVPLSL-------------FNTKGLIEGTEQHGQNRPALDPDTVQILSSL-GLE 263
H+ Y L + + TK L G E G D ++ L G+
Sbjct: 109 THVKYPLEIVEITEEGIVFEDNEFCVETKRLSHGIECFGYRIVEKDIQGALLVDKLLGMG 168
Query: 264 SMTTCLVRHCPNAFGVTMVTKS-------------GHKITYSGDTMPCDALVSIGKNSDL 310
+ + + V + + G IT GDT C+A + +++D+
Sbjct: 169 VKPGPVFKRLKDGEVVELENGTVLDGKDFIGPPQKGRVITILGDTRYCEASRELAQDADV 228
Query: 311 LIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYA-----KLPRLNK 365
L+HEAT E E++A HST QA I + AK ++LTH S RY +L + +
Sbjct: 229 LVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHISSRYQGDTYKELLKEAR 288
Query: 366 DLSENVGIAFDNMRFPEKK 384
+L N IA D FP ++
Sbjct: 289 ELFSNTEIATDLKSFPVER 307
>sp|Q5WGC3|RNZ_BACSK Ribonuclease Z OS=Bacillus clausii (strain KSM-K16) GN=rnz PE=3
SV=1
Length = 312
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 135/318 (42%), Gaps = 41/318 (12%)
Query: 106 EIFPMLSDSGFPLLDKGKQVLAIRGPGPD-TCILLDCGEGTYSQLVRLYGSAVDTLLSQL 164
E+ + + +G P + LAIR + T L DCGE T Q + S L+ +
Sbjct: 2 ELHFLGTGAGVPAKKRNVSALAIRFLERNGTVWLFDCGEATQHQFLHSPLS-----LAAV 56
Query: 165 SAVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRL 224
A++I+HLH DH LGL ++ + S E L + P+ + ++ E+ R
Sbjct: 57 EAIFITHLHGDHILGLPGLLSSRSFQGAETPLDIYGPKGLEAFV---IQALETTKTKLRF 113
Query: 225 VPLSLFNTKGLIEGTEQHGQNRPALD---------------PDTV--QILSSLG------ 261
+G I E+ + ALD P T+ + L ++G
Sbjct: 114 PIRFHVLAEGRIRDEEKLSVDALALDHPVESYAFRIKEQDKPGTLDAEALKAMGVPPGPL 173
Query: 262 ---LESMTTCLVRHCPNAFGVTMVTKS--GHKITYSGDTMPCDALVSIGKNSDLLIHEAT 316
L+ T + G + +S G + +GDT P A+ + +D+L+HEAT
Sbjct: 174 YAQLKKGETVKLADGRIVNGSAFLDESIRGRTVVIAGDTAPVKAMEAFASGADVLVHEAT 233
Query: 317 HEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKD----LSENVG 372
+ +A L HST++ A + + ++LTH S RYA+ +D L NV
Sbjct: 234 FASNKKDDAHLYGHSTIADACALAKRAAVGQLILTHVSSRYARNENEYRDEAAALLPNVI 293
Query: 373 IAFDNMRFPEKKKKKKKK 390
IA D F +K +KK+
Sbjct: 294 IAEDLFVFELEKAGRKKR 311
>sp|B9LQT0|RNZ_HALLT Ribonuclease Z OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM
5036 / JCM 8891 / ACAM 34) GN=rnz PE=3 SV=1
Length = 310
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 60/262 (22%)
Query: 137 ILLDCGEGTYSQLVRL-YGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWS---RVKP 192
+L DCGEGT ++R G +D L ++SHLH DH LG+ +++ R +P
Sbjct: 33 LLFDCGEGTQRGMMRFGTGFGIDHL-------FVSHLHGDHVLGIPGLVQTLGFNDRAEP 85
Query: 193 --------------------------ECKLTLLAPRQIITWLSVYAAR-FESVGHLYRLV 225
+ ++ +AP ++ Y R FE+V +R
Sbjct: 86 LTIHCPPGTEDDLHDLVHAVGHDPAFQIRIESVAPGEVALDADGYEVRAFETV---HRT- 141
Query: 226 PLSLFNTKG-LIEGTEQHGQ-NRPALDPDTVQILSSLG-------LESMTTCLVRHCPNA 276
++G ++E ++ G+ +RP + V + G +E+ +V P+
Sbjct: 142 -----KSQGYVLEEDDRPGRFDRPKAEELGVPVGPKFGRLHEGEPVEAEDGSIVE--PDQ 194
Query: 277 FGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQA 336
V + G K Y+ DT P + V++ +++DLL+H+AT D++E A HST +A
Sbjct: 195 --VVGPPRPGRKFVYTADTRPREGTVAVAEDADLLVHDATFADDMEDRARDTAHSTGREA 252
Query: 337 IRIGREMRAKFVLLTHFSQRYA 358
+ AK + L H S RYA
Sbjct: 253 GSVAERAGAKRLALVHISSRYA 274
>sp|B2S457|RNZ_TREPS Ribonuclease Z OS=Treponema pallidum subsp. pallidum (strain SS14)
GN=rnz PE=3 SV=1
Length = 310
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 41/262 (15%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
L D GEGT L RL ++SA++ISH HADH GL ++ S+V L
Sbjct: 35 FLFDAGEGTQVSLRRL-----SLRWKKISAIFISHTHADHITGLPGLLMLSSQVARSEPL 89
Query: 197 TLLAP----------RQIITWLSVYAARFESV--------GHLYRLVPLSLFNTKGLIEG 238
++ P R+I+ Y + V G +++ L +TK + G
Sbjct: 90 YIIGPPRTAEYVETSRRILDMYINYEIIVKEVIEPQVVYRGKDFQVRCFCLDHTKPCM-G 148
Query: 239 TEQHGQNRP-ALDPDTVQIL----SSLGLESMTTCLVRHCPNAFGVTMV-------TKSG 286
Q+RP + DP Q L +L + + V+ +A GVT+ + G
Sbjct: 149 YTLEEQDRPGSFDPRAAQDLHVPCGALWSQLQSGVAVQ---SAQGVTVYPEQVMGPARPG 205
Query: 287 HKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAK 346
K+++ DT ++ + +NSD + E E +EK+AA K H T QA I R+ R +
Sbjct: 206 RKVSFVTDTKYLQSIAAEVRNSDFFVCEGMFEKGMEKDAAEKKHMTCVQAATIARDARVR 265
Query: 347 FVLLTHFSQRYA--KLPRLNKD 366
+ L H+S RY +L RL K+
Sbjct: 266 LMALIHYSPRYTDHELKRLLKE 287
>sp|O07896|RNZ_TREPA Ribonuclease Z OS=Treponema pallidum (strain Nichols) GN=rnz PE=3
SV=1
Length = 310
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 41/262 (15%)
Query: 137 ILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKL 196
L D GEGT L RL ++SA++ISH HADH GL ++ S+V L
Sbjct: 35 FLFDAGEGTQVSLRRL-----SLRWKKISAIFISHTHADHITGLPGLLMLSSQVARSEPL 89
Query: 197 TLLAP----------RQIITWLSVYAARFESV--------GHLYRLVPLSLFNTKGLIEG 238
++ P R+I+ Y + V G +++ L +TK + G
Sbjct: 90 YIIGPPRTAEYVETSRRILDMYINYEIIVKEVIEPQVVYRGKDFQVRCFCLDHTKPCM-G 148
Query: 239 TEQHGQNRP-ALDPDTVQIL----SSLGLESMTTCLVRHCPNAFGVTMV-------TKSG 286
Q+RP + DP Q L +L + + V+ +A GVT+ + G
Sbjct: 149 YTLEEQDRPGSFDPRAAQDLHVPCGALWSQLQSGVAVQ---SAQGVTVYPEQVMGPARPG 205
Query: 287 HKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAK 346
K+++ DT ++ + +NSD + E E +EK+AA K H T QA I R+ R +
Sbjct: 206 RKVSFVTDTKYLQSIAAEVRNSDFFVCEGMFEKGMEKDAAEKKHMTCVQAATIARDARVR 265
Query: 347 FVLLTHFSQRYA--KLPRLNKD 366
+ L H+S RY +L RL K+
Sbjct: 266 LMALIHYSPRYTDHELKRLLKE 287
>sp|B2J3C7|RNZ_NOSP7 Ribonuclease Z OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=rnz PE=3 SV=1
Length = 319
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 114/272 (41%), Gaps = 30/272 (11%)
Query: 112 SDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISH 171
+ SG P + +A+R P L DCGEGT Q++R + +SQLS ++I+H
Sbjct: 8 TSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQIMR-----SELKISQLSRIFITH 62
Query: 172 LHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLS---------------VYAAR-- 214
+H DH GL ++ ++ + P + ++ V+A R
Sbjct: 63 MHGDHIFGLMGLLATCGLAGNVERIDIYGPPGLNDYIQSASRYSYTHFSYPIKVHAIRPG 122
Query: 215 --FE------SVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQILSSLGLESMT 266
+E S G+L+ + + + ALD + +I L
Sbjct: 123 VIYEDDYFTVSCGNLHHRITAFGYRVAEKDRTGRFDVEKAKALDIPSGRIYGQLKRGETV 182
Query: 267 TCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAA 326
+ + T+ G KI Y DT+ CD V + ++D+LIHEAT + A
Sbjct: 183 ILDDGRVIDGTQLCGPTEIGRKIAYCTDTIYCDGAVELAHDADVLIHEATFAHQDADMAF 242
Query: 327 LKMHSTVSQAIRIGREMRAKFVLLTHFSQRYA 358
++HST + A + A ++++HFS RYA
Sbjct: 243 QRLHSTTTMAAQTALAAGAHRLIMSHFSPRYA 274
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,682,400
Number of Sequences: 539616
Number of extensions: 7655001
Number of successful extensions: 94645
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 219
Number of HSP's that attempted gapping in prelim test: 77510
Number of HSP's gapped (non-prelim): 8264
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)