RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16252
(545 letters)
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 63.2 bits (153), Expect = 2e-11
Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 41/281 (14%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
IL+TG GF+G ++ ++++ V + + + + ++ + +
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDT---VVNIDKLTYAGNLESLSDISESNRYNFEHADI 59
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELK---EAIRTNMCATQTMLD 216
+ + + V H AA D + I TN+ T +L+
Sbjct: 60 CDSAEI----------TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLE 109
Query: 217 LAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERL 276
+A++ + +KN + + L + E
Sbjct: 110 VARKYWSAL----------GEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159
Query: 277 SHENMNTYTLTKAAAEQLLCE--EAQFFPVCIFRPSIVISTWKEP---IPGWIDNLYGPT 331
++ + Y+ +KA+++ L+ P + S + P IP I N
Sbjct: 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILN----- 214
Query: 332 GLVTGAQAGVVRTFLVDPDVKADIVPADLVVNALICAPWNG 372
A G D D + + AL G
Sbjct: 215 -----ALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG 250
Score = 31.6 bits (71), Expect = 0.20
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRV 42
IL+TG GF+G ++ ++++
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDT 27
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 61.6 bits (149), Expect = 5e-11
Identities = 48/324 (14%), Positives = 89/324 (27%), Gaps = 77/324 (23%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
IL+TG GF+G L +KL+ V V ++ ++ + L
Sbjct: 4 ILITGGAGFVGSHLTDKLMM-----DGHEVTVVDNFFTGRKRNVEHWIGHENFEL----- 53
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAA---TLRFDEELKEAIRTNMCATQTMLD 216
++ D + +V+ ++H A+ + + ++TN T ML
Sbjct: 54 ------------INHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLG 101
Query: 217 LAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERL 276
LAK+ ST+ E+ H ++ P+
Sbjct: 102 LAKRVG--ARLLLASTS----------EVYGDPEVHPQSEDYWGHVNPIGPR-------- 141
Query: 277 SHENMNTYTLTKAAAEQLLCEEAQF--FPVCIFRPSIVISTWKEP-----IPGWIDNLYG 329
Y K AE + + V + R + +I
Sbjct: 142 -----ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQ--- 193
Query: 330 PTGLVTGAQAGVVRTFLVDPDVKADIVPADLVVNALICAPWNGHERFHKDPSCLPIYNYV 389
A G T +VN L+ + N
Sbjct: 194 -------ALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS---------PVNLG 237
Query: 390 NSKDNPLTWGEF-ITKSLKEGVKI 412
N +++ + I + G +I
Sbjct: 238 NPEEHTILEFAQLIKNLVGSGSEI 261
Score = 33.5 bits (76), Expect = 0.063
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTV--AIIELIR 75
IL+TG GF+G L +KL+ V + +K + + + ++E +
Sbjct: 4 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY 63
Query: 76 NRPNQTIMGTASPPSLDDFYEG-AEILMTGATGFL 109
+ I ASP S ++ + L T G L
Sbjct: 64 IEVD-QIYHLASPASPPNYMYNPIKTLKTNTIGTL 97
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli
[TaxId: 562]}
Length = 357
Score = 52.5 bits (125), Expect = 6e-08
Identities = 32/223 (14%), Positives = 60/223 (26%), Gaps = 46/223 (20%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
L+TG TG G L E LL V + I R + + ++ D + KF
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGYEV---HGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60
Query: 160 ----TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTML 215
+ + + PD +V + + E + + T +L
Sbjct: 61 YGDLSDTSNLTRILREVQPD-------EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLL 113
Query: 216 DLAKQ--CKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETR 273
+ + + F ST+ +Y + +
Sbjct: 114 EAIRFLGLEKKTRFYQASTSE-----------LY-----------------GLVQEIPQK 145
Query: 274 ERLSHENMNTYTLTKAAAEQLLCEEAQFF--PVCIFRPSIVIS 314
E + Y + K A + + + C S
Sbjct: 146 ETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHES 188
Score = 29.8 bits (66), Expect = 0.78
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTI 45
L+TG TG G L E LL V I
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGYEVHGI 31
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 52.1 bits (124), Expect = 6e-08
Identities = 38/319 (11%), Positives = 80/319 (25%), Gaps = 54/319 (16%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
+L+TG GF+G + +LL ++ R + L+F
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
+++ D + + R TN+ TQT+L A
Sbjct: 63 DIRDAGLLARELRGVDA-------IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAV 115
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLSHE 279
+ +++ + + P E
Sbjct: 116 DAGVGR-------------------VVHVSTNQVYGSIDSGSWTESSP----------LE 146
Query: 280 NMNTYTLTKAAAEQLL--CEEAQFFPVCIFRPSIVISTWKEP---IPGWIDNLYGPTGLV 334
+ Y +KA ++ + V I R ++ P IP ++ N
Sbjct: 147 PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTN-------- 198
Query: 335 TGAQAGVVRTFLVDPDVKADIVPADLVVNALICAPWNGHERFHKDPSCLPIYNYVNSKDN 394
G D + V D + G + + + +++
Sbjct: 199 --LLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA---GEIYHIGGGLELTNREL 253
Query: 395 PLTWGEFITKSLKEGVKIP 413
+ + K+
Sbjct: 254 TGILLDSLGADWSSVRKVA 272
Score = 35.9 bits (82), Expect = 0.010
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 18 ILMTGATGFLGKLLIEKLL-RSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIRN 76
+L+TG GF+G + +LL ++P V VIV + + +D + +
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 77 RPNQTIMGTASPPSLDDFYEGAEI 100
+ +D A
Sbjct: 63 DIRDAGLLARELRGVDAIVHFAAE 86
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 47.9 bits (112), Expect = 2e-06
Identities = 51/307 (16%), Positives = 91/307 (29%), Gaps = 33/307 (10%)
Query: 96 EGAEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLK 155
EG+ +L+TGA GF+ ++E+LL +V+ R+ L +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVR---GTARSASK----------LANLQKRWD 56
Query: 156 FTCSTSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTML 215
E+A D+ L V V H A+ + F + E + + T L
Sbjct: 57 AKYPGRFETAVVEDM-LKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNAL 115
Query: 216 DLAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRER 275
A ++K F S+ S K E IY ++ K + E
Sbjct: 116 RAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWN--------LESIDKAKTLPES 167
Query: 276 LSHENMNTYTLTKAAAEQLLCEEAQFFPVCIFRPSIVISTWKEPIPGWIDNLYGPTGLVT 335
+++ Y +K AE + +++ + I +G +
Sbjct: 168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMM 227
Query: 336 GAQAGVVRTFLVDPDVKADIVPADLVVNALICAPWNGHERFHKDPSCLPIYNYVNSKDNP 395
G V L + + D+ H P Y +
Sbjct: 228 SLFNGEVSPALALMPPQYYVSAVDIG---------LLHLGCLVLPQIERRRVYGTA--GT 276
Query: 396 LTWGEFI 402
W +
Sbjct: 277 FDWNTVL 283
Score = 37.1 bits (84), Expect = 0.004
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 14 EGAEILMTGATGFLGKLLIEKLLRSFPRVKTI 45
EG+ +L+TGA GF+ ++E+LL +V+
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGT 41
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 45.4 bits (106), Expect = 1e-05
Identities = 33/226 (14%), Positives = 60/226 (26%), Gaps = 41/226 (18%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
L+TG TG G L E LL V + IVR + + RI+ + ++
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEV---HGIVRRSSSFNT-GRIEHLYKNPQAHIEGNMK 59
Query: 160 TSKESAQAPDLGLSPDDKRLVTSK----VNLVFHCAATLRFDEELKEAIRTNMCATQTML 215
DL S +++ + + + + + + T +L
Sbjct: 60 LHYG-----DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114
Query: 216 DLAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRER 275
D K C + + + S Y + +E
Sbjct: 115 DAVKTCGLINSVKFYQASTSELY--------------------------GKVQEIPQKET 148
Query: 276 LSHENMNTYTLTKAAAEQLLCE--EAQFFPVCIFRPSIVISTWKEP 319
+ Y K A ++ EA S +
Sbjct: 149 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA 194
Score = 30.7 bits (68), Expect = 0.42
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLD 66
L+TG TG G L E LL V + IVR + + RI+ +
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEV---HGIVRRSSSFNT-GRIEHLYK 48
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 346
Score = 44.6 bits (104), Expect = 2e-05
Identities = 41/277 (14%), Positives = 82/277 (29%), Gaps = 45/277 (16%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
I++TG GF+G + + + P V ++ + ++ +L +
Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVT--VLDKLTYAGNKANLEAILGDRVELVVG--- 59
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELK---EAIRTNMCATQTMLD 216
D+ + + +K + + H AA D L I TN T T+L+
Sbjct: 60 ---------DI-ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLE 109
Query: 217 LAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERL 276
K F +VST E++ + + + P
Sbjct: 110 --AARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP--------- 158
Query: 277 SHENMNTYTLTKAAAEQLLCEEAQFF--PVCIFRPSIVISTWKEPIPGWIDNLYGPTGLV 334
Y+ TKAA++ ++ + F I S ++ +
Sbjct: 159 -------YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQ-------I 204
Query: 335 TGAQAGVVRTFLVDPDVKADIVPADLVVNALICAPWN 371
T AG+ + D + + +
Sbjct: 205 TNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK 241
Score = 35.0 bits (79), Expect = 0.022
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTI 45
I++TG GF+G + + + P V
Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVT 32
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase) {Escherichia
coli [TaxId: 562]}
Length = 315
Score = 44.5 bits (104), Expect = 2e-05
Identities = 26/228 (11%), Positives = 66/228 (28%), Gaps = 64/228 (28%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
+ + G G +G + +L + +++R + ++ +LD+ A+
Sbjct: 5 VFIAGHRGMVGSAIRRQLEQRGDVE----LVLRTRDE------LN-LLDSRAV------- 46
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATL----RFDEELKEAIRTNMCATQTML 215
+ +++ V+ AA + + + I NM ++
Sbjct: 47 ----------------HDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNII 90
Query: 216 DLAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRER 275
A Q ++ ++ + S Y K ++ + ++ L +
Sbjct: 91 HAAHQN-DVNKLLFLGS--SCIYPKLAKQPMAESELLQGTLEPTN--------------- 132
Query: 276 LSHENMNTYTLTKAAAEQLL--CEEAQFFPVCIFRPSIVISTWKEPIP 321
Y + K A +L P+ + P
Sbjct: 133 ------EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHP 174
Score = 32.2 bits (72), Expect = 0.15
Identities = 5/37 (13%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKN 54
+ + G G +G + +L + +++R +
Sbjct: 5 VFIAGHRGMVGSAIRRQLEQRGDVE----LVLRTRDE 37
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 43.5 bits (101), Expect = 4e-05
Identities = 29/227 (12%), Positives = 61/227 (26%), Gaps = 39/227 (17%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
+L+TG G++G + +L+ + + + + + + +
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
E K++ V H A E + +R + L +
Sbjct: 64 KGLEKVFK-------------EYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLE 110
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLSHE 279
+ + +V ++ + Y P E
Sbjct: 111 LMQQYNVSKFVFSSSATVYGDATR----------------------FPNMIPIPEECPLG 148
Query: 280 NMNTYTLTKAAAEQLLCE----EAQFFPVCIFRPSIVISTWKEPIPG 322
N Y TK A E +L + + + + I R I + G
Sbjct: 149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIG 195
Score = 33.1 bits (74), Expect = 0.077
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTI 45
+L+TG G++G + +L+ +
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVA 31
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 41.1 bits (95), Expect = 2e-04
Identities = 17/154 (11%), Positives = 47/154 (30%), Gaps = 13/154 (8%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
+L+TG +G++G +LL++ V + + +K++ P +
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
++ V H A E +++ + L L
Sbjct: 63 ALMTEILH-------------DHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLIS 109
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHY 253
+ + ++ ++ + Y + ++
Sbjct: 110 AMRAANVKNFIFSSSATVYGDQPKIPYVESFPTG 143
Score = 34.6 bits (78), Expect = 0.027
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIRNR 77
+L+TG +G++G +LL++ V + + +K++ P + IRN
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 212
Score = 40.1 bits (92), Expect = 3e-04
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKM 64
+L+ GATG G+ L++++L K + R + P+
Sbjct: 5 VLLAGATGLTGEHLLDRILSEPTLAK-VIAPARKALAEHPRLDNPVG 50
Score = 40.1 bits (92), Expect = 3e-04
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKM 146
+L+ GATG G+ L++++L K + R + P+
Sbjct: 5 VLLAGATGLTGEHLLDRILSEPTLAK-VIAPARKALAEHPRLDNPVG 50
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 363
Score = 40.3 bits (93), Expect = 4e-04
Identities = 34/231 (14%), Positives = 58/231 (25%), Gaps = 42/231 (18%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
I +TGA GF+ + +L + K + V + + C
Sbjct: 18 ISITGAGGFIASHIARRLKH---EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCL 74
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
E V NL + N + M++ A+
Sbjct: 75 KVTEG---------------VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR 119
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLSHE 279
+K F Y S+A K +E + + E
Sbjct: 120 IN-GIKRFFYASSACIYPEFKQLE---------------------TTNVSLKESDAWPAE 157
Query: 280 NMNTYTLTKAAAEQLLCEEAQFF--PVCIFRPSIVISTWKEPIPGWIDNLY 328
+ + L K A E+L + F I R + + G
Sbjct: 158 PQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPA 208
Score = 32.2 bits (72), Expect = 0.16
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 18 ILMTGATGFLGKLLIEKLLR 37
I +TGA GF+ + +L
Sbjct: 18 ISITGAGGFIASHIARRLKH 37
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 39.7 bits (91), Expect = 6e-04
Identities = 31/224 (13%), Positives = 58/224 (25%), Gaps = 13/224 (5%)
Query: 98 AEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFT 157
A++L+TG GFLG L L + ++ + + +
Sbjct: 1 AKLLITGGCGFLGSNLASFALSQGIDL----IVFDNLSRKGATDNLHWLSSLGNFEFVHG 56
Query: 158 CSTSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDL 217
+K PD + A + N+ T +L+
Sbjct: 57 DIRNKNDVTRLITKYMPD-------SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEA 109
Query: 218 AKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLS 277
+Q + Y S + Y + + T Y+ + K + D + S
Sbjct: 110 VRQYNSNCNIIYSS--TNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCS 167
Query: 278 HENMNTYTLTKAAAEQLLCEEAQFFPVCIFRPSIVISTWKEPIP 321
+ Y L A L + + R
Sbjct: 168 KGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWF 211
Score = 33.9 bits (76), Expect = 0.037
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 16 AEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKK 53
A++L+TG GFLG L L + + R
Sbjct: 1 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA 38
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 232
Score = 39.0 bits (89), Expect = 7e-04
Identities = 9/49 (18%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLD 66
+ + GA+G G++L++++L + +I R K + + +
Sbjct: 17 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQE 64
Score = 39.0 bits (89), Expect = 7e-04
Identities = 9/49 (18%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLD 148
+ + GA+G G++L++++L + +I R K + + +
Sbjct: 17 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQE 64
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 39.4 bits (90), Expect = 7e-04
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQS 56
+L+TGA+G G+++ +KL + +VR+ + +
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKE 43
Score = 39.4 bits (90), Expect = 7e-04
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQS 138
+L+TGA+G G+++ +KL + +VR+ + +
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKE 43
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 341
Score = 39.6 bits (91), Expect = 7e-04
Identities = 39/237 (16%), Positives = 70/237 (29%), Gaps = 46/237 (19%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
L+TG GF+G L+E LL+ +V + + + R + + + KF
Sbjct: 19 WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR-SLVSEKQWSNFKFIQG 77
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
+ + D V + R + + TN+ ML A+
Sbjct: 78 DIRNLDDCNNACAGVDY-------VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLSHE 279
K + FTY +++ + D E +
Sbjct: 131 DAKV-QSFTYAASSST----------------------------YGDHPGLPKVEDTIGK 161
Query: 280 NMNTYTLTKAAAEQLL--CEEAQFFPVCIFRPSIVISTWKEP-------IPGWIDNL 327
++ Y +TK E F R V ++P IP W ++
Sbjct: 162 PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM 218
Score = 35.3 bits (80), Expect = 0.017
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIR 75
L+TG GF+G L+E LL+ +V + + + R + + I+
Sbjct: 19 WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 38.1 bits (87), Expect = 0.001
Identities = 18/162 (11%), Positives = 41/162 (25%), Gaps = 27/162 (16%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
I + GATG G + + +++ V V+VR +
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVT---VLVRDSSRLPSEGPRPAH------------- 49
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
L D + + V T + ++ A
Sbjct: 50 ------VVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVA-AM 98
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISK 261
+ + ++AF + + + + K+ +
Sbjct: 99 KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR 140
Score = 35.4 bits (80), Expect = 0.010
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVR 50
I + GATG G + + +++ V V+VR
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVT---VLVR 35
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 38.1 bits (87), Expect = 0.002
Identities = 39/321 (12%), Positives = 80/321 (24%), Gaps = 48/321 (14%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
L+TG TG G L + LL RV + +V +++ + R+ ++ I +
Sbjct: 3 ALVTGITGQDGAYLAKLLLEKGYRV---HGLVA-RRSSDTRWRLRELGIEGDIQYEDGDM 58
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
S + + +V + + + + +L+ +
Sbjct: 59 ADACS-------VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIR 111
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLSHE 279
Q F ST+ + + E
Sbjct: 112 QFSPETRFYQASTSEMFGL----------------------------IQAERQDENTPFY 143
Query: 280 NMNTYTLTKAAAEQLLCE--EAQFFPVCIFRPSIVISTWKEPIPGWIDNLYGPTGLVTGA 337
+ Y + K + E+ S + + +
Sbjct: 144 PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI-EFVTRKV--TDAVARIK 200
Query: 338 QAGVVRTFLVDPDVKADIVPADLVVNALICAPWNGHERFHKDPSCLPIYNYVNSKDNPLT 397
L + D K D A V A+ D + +D
Sbjct: 201 LGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD----KADDYVVATGVTTTVRDMCQI 256
Query: 398 WGEFITKSLKEGVKIPSSQTR 418
E + ++ +KI + R
Sbjct: 257 AFEHVGLDYRDFLKIDPAFFR 277
Score = 31.1 bits (69), Expect = 0.28
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDK 63
L+TG TG G L + LL RV + +V +++ + R+ +
Sbjct: 3 ALVTGITGQDGAYLAKLLLEKGYRV---HGLVA-RRSSDTRWRLRE 44
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 38.3 bits (87), Expect = 0.002
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 11 DFYEGAEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDK 63
F++G + +TG TGF G L L VK + + R+
Sbjct: 4 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVAD 56
Score = 38.3 bits (87), Expect = 0.002
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 93 DFYEGAEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDK 145
F++G + +TG TGF G L L VK + + R+
Sbjct: 4 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVAD 56
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 37.8 bits (86), Expect = 0.003
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIR 75
+L+ G TG++GK ++ + YV+ R + + + + +LI
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHPT---YVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 60
Score = 37.4 bits (85), Expect = 0.003
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQ 141
+L+ G TG++GK ++ + YV+ R + + +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHPT---YVLFRPEVVSNIDK 44
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 37.5 bits (85), Expect = 0.003
Identities = 16/154 (10%), Positives = 44/154 (28%), Gaps = 26/154 (16%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
IL+ GATG++G+ + + L +++VR S ++ +
Sbjct: 6 ILLIGATGYIGRHVAKASLDLGHPT---FLLVRESTASSNSEKAQLLES----------- 51
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
+V ++ ++ + + + + +Q + A
Sbjct: 52 ------------FKASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAI 99
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHY 253
+ + S ++ + E
Sbjct: 100 KEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVK 133
Score = 37.1 bits (84), Expect = 0.004
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDK 63
IL+ GATG++G+ + + L +++VR S ++
Sbjct: 6 ILLIGATGYIGRHVAKASLDLGHPT---FLLVRESTASSNSEKAQL 48
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 281
Score = 35.6 bits (80), Expect = 0.011
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIRNR 77
IL+TGA G LG+ + ++L V + + ++K + +I
Sbjct: 4 ILITGANGQLGREIQKQLKGKNVEV---IPTDVQDLDITNVLAVNKFFNEKKPNVVINCA 60
Query: 78 PNQTIMGTASPP 89
+ +
Sbjct: 61 AHTAVDKCEEQY 72
Score = 34.4 bits (77), Expect = 0.024
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAI 152
IL+TGA G LG+ + ++L V + + ++K +
Sbjct: 4 ILITGANGQLGREIQKQLKGKNVEV---IPTDVQDLDITNVLAVNKFFNEKKP 53
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA
{Aspergillus nidulans [TaxId: 162425]}
Length = 350
Score = 35.0 bits (79), Expect = 0.020
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 8/58 (13%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIR 75
I + GATG G LI V+ V S + I + L + + L +
Sbjct: 6 IAVVGATGRQGASLIRVAAAVGHHVR---AQVH-----SLKGLIAEELQAIPNVTLFQ 55
Score = 34.6 bits (78), Expect = 0.026
Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 3/33 (9%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVR 132
I + GATG G LI V+ V
Sbjct: 6 IAVVGATGRQGASLIRVAAAVGHHVR---AQVH 35
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 34.9 bits (78), Expect = 0.023
Identities = 8/59 (13%), Positives = 21/59 (35%)
Query: 97 GAEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLK 155
G+ +++ G G+ G L + V + +VR + + ++ +
Sbjct: 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59
Score = 34.6 bits (77), Expect = 0.029
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 15 GAEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKK 53
G+ +++ G G+ G L + V + +VR
Sbjct: 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLF 39
>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase
(RmlD) {Salmonella enterica serovar typhimurium [TaxId:
90371]}
Length = 298
Score = 34.1 bits (76), Expect = 0.030
Identities = 11/72 (15%), Positives = 24/72 (33%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAIIELIRNR 77
IL+ G TG +G L L + + S + + + + + ++
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAA 62
Query: 78 PNQTIMGTASPP 89
+ + S P
Sbjct: 63 AHTAVDKAESEP 74
Score = 32.2 bits (71), Expect = 0.15
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRV 124
IL+ G TG +G L L +
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVGNLI 27
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 33.8 bits (75), Expect = 0.049
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 18 ILMTGATGFLGKLLIEKLLR 37
+L+ G GF+G L E+LLR
Sbjct: 3 VLILGVNGFIGNHLTERLLR 22
Score = 33.8 bits (75), Expect = 0.049
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 100 ILMTGATGFLGKLLIEKLLR 119
+L+ G GF+G L E+LLR
Sbjct: 3 VLILGVNGFIGNHLTERLLR 22
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 33.5 bits (75), Expect = 0.059
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTI 45
+L+TG G++G + +LL + I
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVI 32
Score = 33.5 bits (75), Expect = 0.059
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTI 127
+L+TG G++G + +LL + I
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVI 32
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 33.5 bits (75), Expect = 0.062
Identities = 30/229 (13%), Positives = 56/229 (24%), Gaps = 34/229 (14%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
L+TG TG G L E LL K V + +
Sbjct: 4 ALITGITGQDGSYLTEFLLG-----KGYEVHG-----------LIRRSSNFNTQRINHIY 47
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCATQTMLDLAK 219
+ + L D +S + + DE A ++++ + + D
Sbjct: 48 IDPHNVNKALMKLHYADLTDASSLRRWIDVI----KPDEVYNLAAQSHVAVSFEIPDYTA 103
Query: 220 QCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELLKISKLDVDDPKYQETRERLSHE 279
+ S++ Y+A + P +
Sbjct: 104 DVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPR-------- 155
Query: 280 NMNTYTLTKAAAEQLLCEEAQFF--PVCIFRPSIVISTWKEP--IPGWI 324
+ Y +K AA + + C S + + I
Sbjct: 156 --SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI 202
Score = 31.6 bits (70), Expect = 0.26
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 18 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQ 58
L+TG TG G L E LL V + ++R N + Q
Sbjct: 4 ALITGITGQDGSYLTEFLLGKGYEV---HGLIRRSSNFNTQ 41
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase
{Escherichia coli [TaxId: 562]}
Length = 307
Score = 32.3 bits (71), Expect = 0.12
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 18 ILMTGATGFLGKLLIEKLLR 37
I++TG GF+G +++ L
Sbjct: 2 IIVTGGAGFIGSNIVKALND 21
Score = 32.3 bits (71), Expect = 0.12
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 100 ILMTGATGFLGKLLIEKLLR 119
I++TG GF+G +++ L
Sbjct: 2 IIVTGGAGFIGSNIVKALND 21
>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId:
5691]}
Length = 383
Score = 32.5 bits (72), Expect = 0.12
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 18 ILMTGATGFLGKLLIEKLLR 37
+L+ G G++G + LLR
Sbjct: 5 VLVCGGAGYIGSHFVRALLR 24
Score = 32.5 bits (72), Expect = 0.12
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 100 ILMTGATGFLGKLLIEKLLR 119
+L+ G G++G + LLR
Sbjct: 5 VLVCGGAGYIGSHFVRALLR 24
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 30.7 bits (68), Expect = 0.32
Identities = 21/166 (12%), Positives = 50/166 (30%), Gaps = 2/166 (1%)
Query: 92 DDFYEGAEILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVA 151
D++ +L+TG TG +G + L R + ++ R+ + + L+ +
Sbjct: 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPH--LLLVSRSGPDADGAGELVAELEALG 61
Query: 152 ISLKFTCSTSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRFDEELKEAIRTNMCAT 211
+ +L D +++ + + R +
Sbjct: 62 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKV 121
Query: 212 QTMLDLAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHTHYSELL 257
+L + + L + +V + S Y Y + L
Sbjct: 122 LGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL 167
Score = 26.5 bits (57), Expect = 7.3
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 10 DDFYEGAEILMTGATGFLGKLLIEKLLRSFPRV 42
D++ +L+TG TG +G + L R
Sbjct: 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPH 36
>d2h1ca1 c.120.1.1 (A:1-138) Trafficking protein B {Neisseria
gonorrhoeae [TaxId: 485]}
Length = 138
Score = 28.3 bits (62), Expect = 1.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 64 MLDTVAIIELIRNRPNQTIMGTASPPSLDDFYEGAEILM 102
+LDT I E +R +PN+ ++ L+D Y A +
Sbjct: 3 LLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVA 41
>d1beba_ b.60.1.1 (A:) beta-Lactoglobulin {Cow (Bos taurus) [TaxId:
9913]}
Length = 156
Score = 27.9 bits (61), Expect = 1.9
Identities = 8/86 (9%), Positives = 29/86 (33%), Gaps = 11/86 (12%)
Query: 459 GSISVQYSGPRLGRLSAREWEWDNSNVQSMWTLVPAGDRVRFPFNIRDLDWDDYLRAYVR 518
G + + G + ++ + + + +++ + + + D D+ Y
Sbjct: 48 GDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNE---NKVLVLDTDYKKY------ 98
Query: 519 GTLVHHLQDKLDPVTRQKAWKRHRSL 544
L+ +++ +P R+
Sbjct: 99 --LLFCMENSAEPEQSLVCQCLVRTP 122
>d2d7pa1 b.1.18.10 (A:8-106) Filamin C {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 26.9 bits (59), Expect = 2.4
Identities = 18/88 (20%), Positives = 26/88 (29%), Gaps = 14/88 (15%)
Query: 429 VRSRTIQYPGVGVGQLQRAVHVDPSTRGGPGSISVQYSGPRLGRLSAREWEWDNSNVQSM 488
+ ++Q G+ V Q V G G I + P E D+
Sbjct: 7 LTVTSLQETGLKVNQPAS-FAVQ--LNGARGVIDARVHTPSGAVEECYVSELDSDKHTIR 63
Query: 489 WTLVPAGDR---VRF--------PFNIR 505
+ G V+F PF IR
Sbjct: 64 FIPHENGVHSIDVKFNGAHIPGSPFKIR 91
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 26.7 bits (58), Expect = 6.6
Identities = 17/127 (13%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 100 ILMTGATGFLGKLLIEKLLRSFPRVKTIYVIVRAKKNQSPQQRIDKMLDTVAISLKFTCS 159
+++TGA +G L+++L++ I +K + D + + +++
Sbjct: 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV----- 60
Query: 160 TSKESAQAPDLGLSPDDKRLVTSKVNLVFHCAATLRF--------DEELKEAIRTNMCAT 211
T +S +S + + + ++L+ + A L + E + N +
Sbjct: 61 TCDKSLDT---FVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 212 QTMLDLA 218
+
Sbjct: 118 VLLTQKL 124
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU
{Aquifex aeolicus [TaxId: 63363]}
Length = 215
Score = 26.3 bits (57), Expect = 9.7
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 9/93 (9%)
Query: 192 ATLRFDEELKEAIRTNMCATQTMLDLAKQCKNLKMFTYVSTAFSNSYRKNIEEIIYKAHT 251
++ +EL+E + + M L ++ + A + + EE+I T
Sbjct: 5 GGMKLFKELEE-TKEQV---IKMAKLVQE-----AIDKATEALNKQNVELAEEVIKGDDT 55
Query: 252 HYSELLKISKLDVDDPKYQETRERLSHENMNTY 284
+ I + + + M Y
Sbjct: 56 IDLLEVDIERRCIRMIALYQPEAGDLRMIMGIY 88
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 443
Score = 26.6 bits (59), Expect = 9.8
Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Query: 262 LDVDDPKYQETRER-LSHEN 280
+ V DP YQ TR+ S +N
Sbjct: 323 VKVTDPIYQNTRKFVWSEDN 342
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.405
Gapped
Lambda K H
0.267 0.0369 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,084,254
Number of extensions: 100306
Number of successful extensions: 416
Number of sequences better than 10.0: 1
Number of HSP's gapped: 409
Number of HSP's successfully gapped: 74
Length of query: 545
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 455
Effective length of database: 1,171,896
Effective search space: 533212680
Effective search space used: 533212680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.9 bits)