BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16255
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8MKW7|RNZ_DROME Ribonuclease Z, mitochondrial OS=Drosophila melanogaster GN=JhI-1
PE=1 SV=2
Length = 766
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 80/101 (79%)
Query: 20 MREKSMKYVPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKL 79
+R+K VPG VNLQVLGSGA GAP ++YLFTDQ+RYLFNCGEGTQRLAHEHK +L++L
Sbjct: 47 LRKKLASVVPGTVNLQVLGSGANGAPAAVYLFTDQARYLFNCGEGTQRLAHEHKTRLSRL 106
Query: 80 DSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGLVS 120
+ +F+TQ W + GGL GL LTIQD GV +I LHGP L S
Sbjct: 107 EQIFLTQNTWASCGGLPGLTLTIQDAGVRDIGLHGPPHLGS 147
>sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1
SV=2
Length = 826
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 68/90 (75%)
Query: 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPV 88
P V LQV+ +G+R + +LY+F++ +RYLFNCGEG QRL EHK+K+A+LD++F+T+
Sbjct: 55 PNTVYLQVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMH 114
Query: 89 WENLGGLLGLALTIQDVGVPEINLHGPEGL 118
W N+GGL G+ LT+++ G+P+ L GP L
Sbjct: 115 WSNVGGLSGMILTLKETGLPKCVLSGPPQL 144
>sp|Q9GL72|RNZ2_PANTR Zinc phosphodiesterase ELAC protein 2 OS=Pan troglodytes GN=ELAC2
PE=2 SV=1
Length = 826
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 68/90 (75%)
Query: 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPV 88
P V LQV+ +G+R + +LY+F++ +RYLFNCGEG QRL EHK+K+A+LD++F+T+
Sbjct: 55 PNTVYLQVVAAGSRDSGAALYVFSEFNRYLFNCGEGIQRLMQEHKLKVARLDNIFLTRMH 114
Query: 89 WENLGGLLGLALTIQDVGVPEINLHGPEGL 118
W N+GGL G+ LT+++ G+P+ L GP L
Sbjct: 115 WSNVGGLSGMILTLKETGLPKCVLSGPPQL 144
>sp|Q9GL73|RNZ2_GORGO Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla
GN=ELAC2 PE=2 SV=1
Length = 826
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 67/90 (74%)
Query: 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPV 88
P V LQV+ +G+R + +LY+F++ +RYLFNCGEG QRL EHK+K+ +LD++F+T+
Sbjct: 55 PNTVYLQVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVVRLDNIFLTRMH 114
Query: 89 WENLGGLLGLALTIQDVGVPEINLHGPEGL 118
W N+GGL G+ LT+++ G+P+ L GP L
Sbjct: 115 WSNVGGLSGMILTLKETGLPKCVLSGPPQL 144
>sp|Q8HY87|RNZ2_MACFA Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis
GN=ELAC2 PE=2 SV=1
Length = 826
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 66/87 (75%)
Query: 32 VNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWEN 91
V LQV+ G+R A +LY+F++ +RYLFNCGEG QRL EHK+K+A+LD++F+T+ W N
Sbjct: 58 VYLQVVAVGSRDAGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSN 117
Query: 92 LGGLLGLALTIQDVGVPEINLHGPEGL 118
+GGL G+ LT+++ G+P+ L GP L
Sbjct: 118 VGGLSGMILTLKETGLPKCVLSGPPQL 144
>sp|Q80Y81|RNZ2_MOUSE Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus GN=Elac2 PE=1
SV=1
Length = 831
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 67/90 (74%)
Query: 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPV 88
P V LQV+ +G R A +LY+F++ +RYLFNCGEG QRL EHK+K+A+LD++F+T+
Sbjct: 47 PNTVYLQVVAAGGRDAGAALYVFSEYNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMH 106
Query: 89 WENLGGLLGLALTIQDVGVPEINLHGPEGL 118
W N+GGL G+ LT+++ G+P+ L GP L
Sbjct: 107 WSNVGGLCGMILTLKETGLPKCVLSGPPQL 136
>sp|Q8CGS5|RNZ2_RAT Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus GN=Elac2
PE=2 SV=1
Length = 827
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 66/87 (75%)
Query: 32 VNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWEN 91
V LQV+ +G R A +LY+F++ +RYLFNCGEG QRL EHK+K+A+LD++F+T+ W N
Sbjct: 52 VYLQVVAAGGRDAAAALYVFSEYNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSN 111
Query: 92 LGGLLGLALTIQDVGVPEINLHGPEGL 118
+GGL G+ LT+++ G+P+ L GP L
Sbjct: 112 VGGLCGMILTLKETGLPKCVLSGPPQL 138
>sp|P36159|RNZ_YEAST Ribonuclease Z OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRZ1 PE=1 SV=1
Length = 838
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 56 RYLF-NCGEGTQRLAHEHKMKLAKLDSVFITQPV-WENLGGLLGLALTIQDVGVPEINLH 113
+Y F GEG+QR E+K++++KL +F+T + W ++GGL G+ LTI D G + LH
Sbjct: 28 KYFFGKIGEGSQRSLTENKIRISKLKDIFLTGELNWSDIGGLPGMILTIADQGKSNLVLH 87
>sp|B2J3C7|RNZ_NOSP7 Ribonuclease Z OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=rnz PE=3 SV=1
Length = 319
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG-VPEINLHGP 115
+LF+CGEGTQ ++K+++L +FIT +++ GL+GL T G V I+++GP
Sbjct: 33 WLFDCGEGTQHQIMRSELKISQLSRIFITHMHGDHIFGLMGLLATCGLAGNVERIDIYGP 92
Query: 116 EGL 118
GL
Sbjct: 93 PGL 95
>sp|Q89ZN1|RNZ_BACTN Ribonuclease Z OS=Bacteroides thetaiotaomicron (strain ATCC 29148 /
DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=rnz PE=3 SV=1
Length = 316
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 23/143 (16%)
Query: 33 NLQVLGSGARGAPKSLYLFTDQ------SRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQ 86
L +LG G+ P + + T Q ++ +CGEG Q ++K ++L+ +FI+
Sbjct: 5 ELHILGCGS-ALPTTRHFATSQVVNLREKLFMIDCGEGAQMQLRRSRLKFSRLNHIFISH 63
Query: 87 PVWENLGGLLGLALTIQDVG-VPEINLHGPEGLVSENMGLAS------------NSISPS 133
++ GLLGL T +G ++++H P+GL L S +
Sbjct: 64 LHGDHCFGLLGLISTFGLLGRTADLHIHSPKGLEELFAPLLSFFCKTLAYKVFFHEFETK 123
Query: 134 DPALI---QARTLMKIPLRPRLP 153
+P LI ++ + IPLR R+P
Sbjct: 124 EPTLIYDDRSVAVTTIPLRHRIP 146
>sp|Q979A8|RNZ_THEVO Ribonuclease Z OS=Thermoplasma volcanium (strain ATCC 51530 / DSM
4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rnz PE=3 SV=2
Length = 304
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 58 LFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQ-DVGVPEINLHGPE 116
LF+CGEGTQ+ + K +D++FIT ++ GL+GL ++ + ++N+ GP
Sbjct: 36 LFDCGEGTQKQIMKSKWSFMSIDNIFITHFHGDHFLGLIGLVQSMSFNNRTKDLNIFGPR 95
Query: 117 GLVSENMGLASNSIS 131
G + G+ SN+I+
Sbjct: 96 GAI----GIISNAIN 106
>sp|C0ZBP8|RNZ_BREBN Ribonuclease Z OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=rnz PE=3 SV=1
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGL--ALTIQDVGVPEINLHG 114
+LF+CGEGTQ MK+++LD +FIT ++L GL+GL + ++++ + L+G
Sbjct: 33 WLFDCGEGTQHQLLRAPMKISQLDKIFITHLHGDHLYGLIGLLASRSLRNTEPTPLELYG 92
Query: 115 PEGL 118
P GL
Sbjct: 93 PPGL 96
>sp|A6LFA6|RNZ_PARD8 Ribonuclease Z OS=Parabacteroides distasonis (strain ATCC 8503 /
DSM 20701 / NCTC 11152) GN=rnz PE=3 SV=1
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 23/143 (16%)
Query: 33 NLQVLGSGARGAPKSLYLFTDQ------SRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQ 86
++ +LG G+ P + +L T Q Y+ +CGEGTQ ++K ++L+ +FI+
Sbjct: 5 DINILGCGS-ALPTTRHLATSQIVDLRDKLYMIDCGEGTQVQMRRMRIKFSRLNHIFISH 63
Query: 87 PVWENLGGLLGLALTIQDVGVP-EINLHGPEGLVSEN------------MGLASNSISPS 133
++ GL GL T+ +G E+ +HGP+ + S + N I P+
Sbjct: 64 LHGDHCFGLPGLISTLGMLGRNGELVIHGPKEIESYMRPVLDIFCKGLPYEIRFNLIDPT 123
Query: 134 DPALI---QARTLMKIPLRPRLP 153
+L+ ++ ++ IPL+ R+P
Sbjct: 124 THSLVMEDRSLSVYSIPLKHRIP 146
>sp|Q5LGN7|RNZ_BACFN Ribonuclease Z OS=Bacteroides fragilis (strain ATCC 25285 / NCTC
9343) GN=rnz PE=3 SV=1
Length = 304
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 33 NLQVLGSGARGAPKSLYLFTDQ------SRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQ 86
L +LG G+ P + + T Q ++ +CGEG Q + ++K ++L+ +FI+
Sbjct: 5 ELHILGCGS-ALPTTRHFATSQVVNLRDKLFMIDCGEGAQMQLRKSRLKFSRLNHIFISH 63
Query: 87 PVWENLGGLLGLALTIQDVG-VPEINLHGPEGL 118
++ GL+GL T +G E+++H P+GL
Sbjct: 64 LHGDHCFGLMGLISTFGLLGRTAELHIHSPKGL 96
>sp|Q64XI2|RNZ_BACFR Ribonuclease Z OS=Bacteroides fragilis (strain YCH46) GN=rnz PE=3
SV=1
Length = 304
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 33 NLQVLGSGARGAPKSLYLFTDQ------SRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQ 86
L +LG G+ P + + T Q ++ +CGEG Q + ++K ++L+ +FI+
Sbjct: 5 ELHILGCGS-ALPTTRHFATSQVVNLRDKLFMIDCGEGAQMQLRKSRLKFSRLNHIFISH 63
Query: 87 PVWENLGGLLGLALTIQDVG-VPEINLHGPEGL 118
++ GL+GL T +G E+++H P+GL
Sbjct: 64 LHGDHCFGLMGLISTFGLLGRTAELHIHSPKGL 96
>sp|O44476|RNZ_CAEEL Ribonuclease Z OS=Caenorhabditis elegans GN=hoe-1 PE=2 SV=2
Length = 833
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 24 SMKYVPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVF 83
S+ +P V+++VLG+G L T Y+FNC E R + +++ + + +F
Sbjct: 91 SIVNIPSQVSIEVLGNGTGLLRACFILRTPLKTYMFNCPENACRFLWQLRIRSSSVVDLF 150
Query: 84 ITQPVWENLGGLLGLALTIQDVGVPEINLHG 114
IT W+N+ G+ + L+ ++ LHG
Sbjct: 151 ITSANWDNIAGISSILLS-KESNALSTRLHG 180
>sp|Q8YLZ0|RNZ_NOSS1 Ribonuclease Z OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rnz
PE=3 SV=1
Length = 322
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG-VPEINLHGP 115
+LF+CGEGTQ +K+++L +FIT +++ GL+GL + G V ++++GP
Sbjct: 33 WLFDCGEGTQHQILRSDLKVSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVQRVDIYGP 92
Query: 116 EGL 118
GL
Sbjct: 93 SGL 95
>sp|Q7NDW3|RNZ_GLOVI Ribonuclease Z OS=Gloeobacter violaceus (strain PCC 7421) GN=rnz
PE=3 SV=1
Length = 317
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 55 SRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGL--ALTIQDVGVPEINL 112
S +LF+CGEGTQ ++L++L+ VF T ++L GL+GL + + G + L
Sbjct: 31 SLWLFDCGEGTQHQVLRTPLRLSQLEKVFFTHLHGDHLFGLVGLLASRALGSAGTTPVKL 90
Query: 113 HGPEGL 118
+GP GL
Sbjct: 91 YGPPGL 96
>sp|Q8TWK0|RNZ_METKA Ribonuclease Z OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=rnz PE=3 SV=1
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 34 LQVLGSGA------RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQP 87
++ LG+G R P L F+ ++ L +CGEGTQR A E + + +D+V +T
Sbjct: 7 MRFLGTGGAVPSKDRSHPGLLVEFS-GTKLLIDCGEGTQRRAMEQGVTIHDVDAVLLTHH 65
Query: 88 VWENLGGLLGLALTIQDVGVPEINLHGP 115
+++ GLL LA T+ + + ++GP
Sbjct: 66 HVDHVAGLLPLATTVDLLHGRRLKVYGP 93
>sp|A3PEI3|RNZ_PROM0 Ribonuclease Z OS=Prochlorococcus marinus (strain MIT 9301) GN=rnz
PE=3 SV=1
Length = 312
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 32 VNLQVLGSGARGAPK------SLYLFTDQSR--YLFNCGEGTQRLAHEHKMKLAKLDSVF 83
+N+ LG+ + G P SL L QS +LF+CGEGTQ + +K +++ +F
Sbjct: 1 MNITFLGTSS-GVPSLTRNVSSLALKLSQSSEVWLFDCGEGTQHQIMKSNIKSSQIKKIF 59
Query: 84 ITQPVWENLGGLLGLALTIQDVGVPE-INLHGPEGLVS 120
IT +++ GL GL T+ G E I ++GP GL S
Sbjct: 60 ITHMHGDHIYGLPGLLATLGLSGNSEGIQIYGPSGLRS 97
>sp|Q55132|RNZ_SYNY3 Ribonuclease Z OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=rnz PE=3 SV=1
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ ++K+++L +FIT +++ GL+GL + G + I ++GP
Sbjct: 33 WLFDCGEGTQHQFLRSEVKISQLTRIFITHLHGDHIFGLMGLLASSGLAGSGQGIEIYGP 92
Query: 116 EGL 118
EGL
Sbjct: 93 EGL 95
>sp|B0CE23|RNZ_ACAM1 Ribonuclease Z OS=Acaryochloris marina (strain MBIC 11017) GN=rnz
PE=3 SV=1
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ ++K ++L +FIT +++ GL+GL + G E I+++GP
Sbjct: 33 WLFDCGEGTQHQLLRSELKSSQLRRIFITHMHGDHIFGLMGLLASCGLAGNTERIDIYGP 92
Query: 116 EGL------------VSENMGLASNSISPSDPALIQARTLMKIPLRPRLP 153
GL + + +++ P + Q +++ PL+ R+P
Sbjct: 93 AGLEEYLQACRRYSQTHFSYPIQVHTVQPGEVFSDQDYSVVCAPLKHRVP 142
>sp|Q29RY4|RNZ1_BOVIN Zinc phosphodiesterase ELAC protein 1 OS=Bos taurus GN=ELAC1 PE=2
SV=1
Length = 363
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 32 VNLQVLGSGA------RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFIT 85
+++ LG+GA RGA +L L + +LF+CGEGTQ + ++K ++ +FIT
Sbjct: 3 MDVTFLGTGAAYPSPTRGA-SALVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFIT 61
Query: 86 QPVWENLGGLLGLALTI-----QDVGVPEINLHGPEGL 118
++ GL GL TI V I ++GP GL
Sbjct: 62 HLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPVGL 99
>sp|Q8VEB6|RNZ1_MOUSE Zinc phosphodiesterase ELAC protein 1 OS=Mus musculus GN=Elac1 PE=2
SV=1
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 32 VNLQVLGSGA------RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFIT 85
+++ LG+GA RGA ++ L + +LF+CGEGTQ + ++K ++ +FIT
Sbjct: 3 MDVTFLGTGAAYPSPTRGA-SAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFIT 61
Query: 86 QPVWENLGGLLGLALTI-----QDVGVPEINLHGPEGL 118
++ GL GL TI V I ++GP GL
Sbjct: 62 HLHGDHFFGLPGLLCTISLQSGSVVARQPIEIYGPVGL 99
>sp|O29323|RNZ_ARCFU Ribonuclease Z OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16
/ DSM 4304 / JCM 9628 / NBRC 100126) GN=rnz PE=3 SV=1
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 39 SGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGL 98
S R +P F Q R LF+CGEGTQR K LD++FIT ++ GL GL
Sbjct: 16 SVERNSPAIFVQFGGQ-RMLFDCGEGTQRQMMIAKTGFRNLDNIFITHLHTDHFIGLFGL 74
Query: 99 ALTIQ-DVGVPEINLHGPEGLV 119
T+ + E+N++ P V
Sbjct: 75 IETMSLNERSRELNVYSPRAEV 96
>sp|Q9H777|RNZ1_HUMAN Zinc phosphodiesterase ELAC protein 1 OS=Homo sapiens GN=ELAC1 PE=1
SV=2
Length = 363
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 32 VNLQVLGSGA------RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFIT 85
+++ LG+GA RGA ++ L + +LF+CGEGTQ + ++K ++ +FIT
Sbjct: 3 MDVTFLGTGAAYPSPTRGA-SAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFIT 61
Query: 86 QPVWENLGGLLGLALTI-----QDVGVPEINLHGPEGL 118
++ GL GL TI V I ++GP GL
Sbjct: 62 HLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGL 99
>sp|B0JGG3|RNZ_MICAN Ribonuclease Z OS=Microcystis aeruginosa (strain NIES-843) GN=rnz
PE=3 SV=1
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG-VPEINLHGP 115
+LF+CGEGTQ +K +++ +FIT +++ GL+GL +I G +I+++GP
Sbjct: 33 WLFDCGEGTQHQLLRSDLKSSQIRRIFITHMHGDHIFGLMGLLASIGLAGSAQDIDIYGP 92
Query: 116 EGL 118
GL
Sbjct: 93 PGL 95
>sp|Q9HJ19|RNZ_THEAC Ribonuclease Z OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=rnz PE=3
SV=2
Length = 307
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 58 LFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQ-DVGVPEINLHGPE 116
LF+CGEGTQ+ + +D++FIT ++ GLLGL ++ + ++N+ GP
Sbjct: 36 LFDCGEGTQKQIMKSSTSFMDIDNIFITHFHGDHFLGLLGLVQSMSFNNRTKQLNIFGPH 95
Query: 117 GLV 119
G +
Sbjct: 96 GAI 98
>sp|Q51834|RNZ_PORGI Ribonuclease Z OS=Porphyromonas gingivalis (strain ATCC BAA-308 /
W83) GN=rnz PE=3 SV=2
Length = 304
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 33 NLQVLGSGA-----RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQP 87
++ +LG G+ P S + Y+ +CGEG QR K+ +L +FI+
Sbjct: 5 SVHILGCGSALPTTHHHPSSQVIDLRDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHL 64
Query: 88 VWENLGGLLGLALTIQDVG-VPEINLHGPEGL------VSENMG------LASNSISPSD 134
++ GL G T+ +G +++HGPEG+ + E + ++I S
Sbjct: 65 HGDHCFGLPGFISTLGLLGRTGTLHVHGPEGIERFLSPILEQFCHRMPYQVEIHTIDASR 124
Query: 135 PALIQARTLMK---IPLRPRLP 153
AL+ +K IPL R+P
Sbjct: 125 HALVHEDKSVKVYSIPLSHRIP 146
>sp|B2RIU4|RNZ_PORG3 Ribonuclease Z OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM
20709 / JCM 12257) GN=rnz PE=3 SV=1
Length = 304
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 33 NLQVLGSGA-----RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQP 87
++ +LG G+ P S + Y+ +CGEG QR K+ +L +FI+
Sbjct: 5 SVHILGCGSALPTTHHHPSSQVIDLRDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHL 64
Query: 88 VWENLGGLLGLALTIQDVG-VPEINLHGPEGL------VSENMG------LASNSISPSD 134
++ GL G T+ +G +++HGPEG+ + E + ++I S
Sbjct: 65 HGDHCFGLPGFISTLGLLGRTGTLHVHGPEGIERFLSPILEQFCHRMPYQVEIHTIDASR 124
Query: 135 PALIQARTLMK---IPLRPRLP 153
AL+ +K IPL R+P
Sbjct: 125 HALVHEDKSVKVYSIPLSHRIP 146
>sp|A5MZX7|RNZ_CLOK5 Ribonuclease Z OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555
/ NCIMB 10680) GN=rnz PE=3 SV=1
Length = 303
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 56 RYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHG 114
+ L +CGEGTQ K+ +D + T +++ GL GL LTI + G E I + G
Sbjct: 31 KLLIDCGEGTQVSLKILGWKIRNIDVILFTHFHADHIAGLPGLLLTIANSGRLEPITIIG 90
Query: 115 PEGLVSENMGLASNSISPSDPALIQ 139
P GL+ MGL I+P P I+
Sbjct: 91 PYGLIKIVMGL--KVIAPVLPYSIE 113
>sp|B9E3V3|RNZ_CLOK1 Ribonuclease Z OS=Clostridium kluyveri (strain NBRC 12016) GN=rnz
PE=3 SV=1
Length = 303
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 56 RYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHG 114
+ L +CGEGTQ K+ +D + T +++ GL GL LTI + G E I + G
Sbjct: 31 KLLIDCGEGTQVSLKILGWKIRNIDVILFTHFHADHIAGLPGLLLTIANSGRLEPITIIG 90
Query: 115 PEGLVSENMGLASNSISPSDPALIQ 139
P GL+ MGL I+P P I+
Sbjct: 91 PYGLIKIVMGL--KVIAPVLPYSIE 113
>sp|B7K762|RNZ_CYAP7 Ribonuclease Z OS=Cyanothece sp. (strain PCC 7424) GN=rnz PE=3 SV=1
Length = 318
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ +K ++L +FIT +++ GL+GL + G + ++L+GP
Sbjct: 33 WLFDCGEGTQHQLLRSDIKTSQLRRIFITHLHGDHIFGLMGLLASCGLAGNAQPVDLYGP 92
Query: 116 EGL 118
GL
Sbjct: 93 PGL 95
>sp|A0AK82|RNZ_LISW6 Ribonuclease Z OS=Listeria welshimeri serovar 6b (strain ATCC 35897
/ DSM 20650 / SLCC5334) GN=rnz PE=3 SV=1
Length = 306
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGL--ALTIQDVGVPEINLHG 114
+LF+CGE TQ ++KL+KL+ +FIT +++ GL GL + + Q G I ++G
Sbjct: 34 WLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQG-GDSTITIYG 92
Query: 115 PEGL 118
P G+
Sbjct: 93 PAGI 96
>sp|B7K1N1|RNZ_CYAP8 Ribonuclease Z OS=Cyanothece sp. (strain PCC 8801) GN=rnz PE=3 SV=1
Length = 314
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG-VPEINLHGP 115
+LF+CGEGTQ +K++++ +FIT +++ GL+GL + G +I ++GP
Sbjct: 33 WLFDCGEGTQHQLLRSDVKISQITRIFITHMHGDHIYGLMGLLASCGLAGNAQDIEIYGP 92
Query: 116 EGLVSENMGLASNS 129
L+ A S
Sbjct: 93 PDLIDYLKACAKYS 106
>sp|Q118J2|RNZ_TRIEI Ribonuclease Z OS=Trichodesmium erythraeum (strain IMS101) GN=rnz
PE=3 SV=1
Length = 321
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG-VPEINLHGP 115
+LF+CGEGTQ +K+++L +FIT +++ GL+GL + G V + L+GP
Sbjct: 33 WLFDCGEGTQHQFLRSDLKVSQLSRIFITHMHGDHVFGLMGLLASCGLGGNVKSVTLYGP 92
Query: 116 EGL 118
L
Sbjct: 93 PAL 95
>sp|B7J0K1|RNZ_BORBZ Ribonuclease Z OS=Borrelia burgdorferi (strain ZS7) GN=rnz PE=3
SV=1
Length = 319
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 33 NLQVLGSGARGAPKSLYLFT-----DQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQP 87
N+ ++G+G + YL + D +LF+CGEGTQ + K+ K+ + IT
Sbjct: 4 NINIIGTGGTRPLHNRYLSSVLIEYDGDNFLFDCGEGTQMSLRKQKISWQKIKMICITHL 63
Query: 88 VWENLGGLLGLALTIQDVG 106
+++ GLLG+ + + G
Sbjct: 64 HADHITGLLGIVMLMSQSG 82
>sp|O51696|RNZ_BORBU Ribonuclease Z OS=Borrelia burgdorferi (strain ATCC 35210 / B31 /
CIP 102532 / DSM 4680) GN=rnz PE=3 SV=1
Length = 319
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 33 NLQVLGSGARGAPKSLYLFT-----DQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQP 87
N+ ++G+G + YL + D +LF+CGEGTQ + K+ K+ + IT
Sbjct: 4 NINIIGTGGTRPLHNRYLSSVLIEYDGDNFLFDCGEGTQMSLRKQKISWQKIKMICITHL 63
Query: 88 VWENLGGLLGLALTIQDVG 106
+++ GLLG+ + + G
Sbjct: 64 HADHITGLLGIVMLMSQSG 82
>sp|A2BSS2|RNZ_PROMS Ribonuclease Z OS=Prochlorococcus marinus (strain AS9601) GN=rnz
PE=3 SV=1
Length = 312
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 32 VNLQVLGSGARGAPK------SLYLFTDQSR--YLFNCGEGTQRLAHEHKMKLAKLDSVF 83
+N+ LG+ + G P SL L QS +LF+CGEGTQ + +K +++ +F
Sbjct: 1 MNITFLGTSS-GVPSLTRNVSSLALKLSQSAEVWLFDCGEGTQHQIMKSNIKSSQIKKIF 59
Query: 84 ITQPVWENLGGLLGLALTIQDVGVPE-INLHGPEGLVS 120
IT +++ GL GL T+ G E I ++GP L S
Sbjct: 60 ITHMHGDHIYGLPGLLATLGLSGNSEGIEIYGPSELRS 97
>sp|A6UUY8|RNZ_META3 Ribonuclease Z OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
BAA-1280) GN=rnz PE=3 SV=1
Length = 322
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 37 LGSGARGAPK-----SLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWEN 91
LG+GA K S+ + D +LF+CGEGTQR + K++++FI+ ++
Sbjct: 6 LGTGAAIPTKHRNHSSVGIKYDGEVFLFDCGEGTQRQMIYTDISPMKINNIFISHLHGDH 65
Query: 92 LGGLLGLALTIQDVGVPE-INLHGP 115
+ GL GL +I G E IN++GP
Sbjct: 66 ILGLAGLLQSIGFNGRTEPINIYGP 90
>sp|B8DBV5|RNZ_LISMH Ribonuclease Z OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=rnz PE=3 SV=1
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGL--ALTIQDVGVPEINLHG 114
+LF+CGE TQ ++KL+KL+ +FIT +++ GL GL + + Q G ++ ++G
Sbjct: 34 WLFDCGEATQHQIMRSQIKLSKLEKIFITHLHGDHIFGLPGLLSSRSFQG-GESDLTIYG 92
Query: 115 PEGLV 119
P G+
Sbjct: 93 PVGIT 97
>sp|Q6KZJ4|RNZ_PICTO Ribonuclease Z OS=Picrophilus torridus (strain ATCC 700027 / DSM
9790 / JCM 10055 / NBRC 100828) GN=rnz PE=3 SV=1
Length = 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 34 LQVLGSGA------RGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQP 87
+ LG+G RG P ++ + D LF+CGEGTQ+ + + + ++FI+
Sbjct: 7 ITFLGTGGSVPKPGRGLP-AIAVQVDNIVNLFDCGEGTQKQFMKSGVSFMNVKNIFISHF 65
Query: 88 VWENLGGLLGLALTIQDVG-VPEINLHGPEGLVSE 121
++ GL GL T G + ++N+ GP G + E
Sbjct: 66 HGDHFFGLPGLLSTFSFNGRIDDLNIFGPPGTIDE 100
>sp|Q03F36|RNZ_PEDPA Ribonuclease Z OS=Pediococcus pentosaceus (strain ATCC 25745 /
183-1w) GN=rnz PE=3 SV=1
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 32 VNLQVLGSGARGAPKSLYLFT-------DQSR--YLFNCGEGTQRLAHEHKMKLAKLDSV 82
+ L+ LG+GA G+P T D+S +LF+CGE TQ + +K K+D +
Sbjct: 1 MQLEFLGTGA-GSPGKFRNVTSVALKLLDESNEVWLFDCGEATQHQILKTNIKPRKIDKI 59
Query: 83 FITQPVWENLGGLLG-LALTIQDVGVPEINLHGPEGL 118
FIT +++ GL G L+ G E+ + GP G+
Sbjct: 60 FITHLHGDHIFGLPGFLSSRSNQGGSEELTIFGPTGI 96
>sp|Q46JB7|RNZ_PROMT Ribonuclease Z OS=Prochlorococcus marinus (strain NATL2A) GN=rnz
PE=3 SV=1
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ +KL+++ +FIT +++ GL GL +I G I L+GP
Sbjct: 33 WLFDCGEGTQHQFIRSNLKLSQIKKIFITHMHGDHIYGLPGLLASIGLAGSSSGIELYGP 92
Query: 116 EGL 118
L
Sbjct: 93 APL 95
>sp|A2C4C2|RNZ_PROM1 Ribonuclease Z OS=Prochlorococcus marinus (strain NATL1A) GN=rnz
PE=3 SV=1
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ +KL+++ +FIT +++ GL GL +I G I L+GP
Sbjct: 33 WLFDCGEGTQHQFIRSNLKLSQIKKIFITHMHGDHIYGLPGLLASIGLAGSSSGIELYGP 92
Query: 116 EGL 118
L
Sbjct: 93 APL 95
>sp|B8HP81|RNZ_CYAP4 Ribonuclease Z OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)
GN=rnz PE=3 SV=1
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG-VPEINLHGP 115
+LF+CGE TQ ++L+++ +FIT +++ GL+GL + G V ++++GP
Sbjct: 33 WLFDCGEATQHQILRSDVRLSQIRRIFITHMHGDHIFGLMGLLASCGLAGNVSRMDIYGP 92
Query: 116 EGL 118
GL
Sbjct: 93 PGL 95
>sp|A2C725|RNZ_PROM3 Ribonuclease Z OS=Prochlorococcus marinus (strain MIT 9303) GN=rnz
PE=3 SV=1
Length = 318
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ ++L++L VF++ +++ GL GL ++ G ++L+GP
Sbjct: 33 WLFDCGEGTQHQFLRSDLRLSQLRRVFVSHMHGDHVFGLPGLLASLGLSGNSNGVDLYGP 92
Query: 116 EGLVSENMGLASNS 129
+ L S G+ NS
Sbjct: 93 DPLESYLQGVLRNS 106
>sp|Q319D8|RNZ_PROM9 Ribonuclease Z OS=Prochlorococcus marinus (strain MIT 9312) GN=rnz
PE=3 SV=1
Length = 312
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 32 VNLQVLGSGARGAPK------SLYLFTDQSR--YLFNCGEGTQRLAHEHKMKLAKLDSVF 83
+N+ LG+ + G P SL L QS +LF+CGEGTQ + +K +++ +F
Sbjct: 1 MNITFLGTSS-GVPSLTRNVSSLALKLSQSSEVWLFDCGEGTQHQIMKSNIKSSQIKKIF 59
Query: 84 ITQPVWENLGGLLGLALTIQDVGVPE-INLHGPEGL 118
IT +++ GL GL T+ G I ++GP GL
Sbjct: 60 ITHMHGDHIYGLPGLLATLGLSGNSNGIEIYGPLGL 95
>sp|Q92A38|RNZ_LISIN Ribonuclease Z OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=rnz PE=3 SV=1
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGL--ALTIQDVGVPEINLHG 114
+LF+CGE TQ +KL+KL+ +FIT +++ GL GL + + Q G ++ ++G
Sbjct: 34 WLFDCGEATQHQVLRSHIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQG-GDSDLTIYG 92
Query: 115 PEGL 118
P G+
Sbjct: 93 PAGI 96
>sp|Q7V5W1|RNZ_PROMM Ribonuclease Z OS=Prochlorococcus marinus (strain MIT 9313) GN=rnz
PE=3 SV=2
Length = 318
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 57 YLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE-INLHGP 115
+LF+CGEGTQ ++L++L VF++ +++ GL GL ++ G ++L+GP
Sbjct: 33 WLFDCGEGTQHQFLRSDLRLSQLRRVFVSHMHGDHVFGLPGLLASLGLSGNSNGVDLYGP 92
Query: 116 EGLVSENMGLASNS 129
+ L S G+ NS
Sbjct: 93 DPLESYLQGVLRNS 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,741,288
Number of Sequences: 539616
Number of extensions: 2239092
Number of successful extensions: 6497
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 6249
Number of HSP's gapped (non-prelim): 307
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)