Query psy16255
Match_columns 156
No_of_seqs 212 out of 1504
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 16:45:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwf_A Zinc phosphodiesterase 99.9 8.7E-26 3E-30 184.6 12.2 123 32-154 1-184 (368)
2 2cbn_A Ribonuclease Z; phospho 99.9 5.2E-25 1.8E-29 174.1 13.5 124 31-154 1-146 (306)
3 1y44_A Ribonuclease Z; zinc-de 99.9 4.6E-24 1.6E-28 169.9 12.4 123 32-154 1-144 (320)
4 3jxp_A Coenzyme PQQ synthesis 99.9 1.6E-23 5.4E-28 168.5 10.4 117 30-152 1-167 (321)
5 1zkp_A Hypothetical protein BA 99.9 8.5E-22 2.9E-26 153.2 15.3 125 28-153 21-161 (268)
6 3md7_A Beta-lactamase-like; ss 99.9 4.1E-22 1.4E-26 157.6 12.4 124 25-151 22-192 (293)
7 3g1p_A Protein PHNP; C-P lyase 99.8 1.6E-20 5.6E-25 145.7 12.6 116 30-153 1-146 (258)
8 2az4_A Hypothetical protein EF 99.8 1.7E-18 5.7E-23 143.2 10.3 116 30-153 5-170 (429)
9 3bk2_A RNAse J, metal dependen 99.8 8.7E-19 3E-23 150.1 8.0 127 27-154 12-161 (562)
10 2e7y_A TRNAse Z; tRNA maturati 99.7 6.5E-18 2.2E-22 131.3 10.7 115 32-153 1-137 (280)
11 3iek_A Ribonuclease TTHA0252; 99.7 1.1E-17 3.9E-22 139.0 8.6 117 32-153 1-144 (431)
12 3zq4_A Ribonuclease J 1, RNAse 99.7 3.1E-17 1.1E-21 140.3 7.8 119 30-154 7-146 (555)
13 2i7t_A Cleavage and polyadenyl 99.7 6.8E-17 2.3E-21 134.9 9.5 122 28-153 8-161 (459)
14 2ycb_A Beta-CAsp RNAse, cleava 99.7 6.5E-16 2.2E-20 134.0 13.2 120 28-152 176-331 (636)
15 3bv6_A Metal-dependent hydrola 99.7 8.3E-16 2.9E-20 125.7 12.2 117 27-151 57-209 (379)
16 3af5_A Putative uncharacterize 99.7 7.1E-16 2.4E-20 134.1 12.2 121 28-152 185-346 (651)
17 3kl7_A Putative metal-dependen 99.6 1.8E-15 6E-20 116.3 11.2 109 25-153 23-134 (235)
18 2xr1_A Cleavage and polyadenyl 99.6 3.9E-16 1.3E-20 135.5 7.0 119 29-152 181-334 (640)
19 2i7x_A Protein CFT2; polyadeny 99.6 4.3E-16 1.5E-20 136.7 6.9 120 32-152 1-160 (717)
20 2wyl_A L-ascorbate-6-phosphate 99.6 3.9E-15 1.3E-19 120.8 10.7 118 27-152 33-186 (360)
21 1ztc_A Hypothetical protein TM 99.6 2.3E-15 7.9E-20 114.1 8.7 113 30-152 11-154 (221)
22 3m8t_A 'BLR6230 protein; subcl 99.6 1.7E-14 5.8E-19 112.8 12.3 110 34-152 47-179 (294)
23 1sml_A Protein (penicillinase) 99.6 1.6E-14 5.6E-19 112.0 9.8 103 44-152 37-162 (269)
24 1k07_A FEZ-1 beta-lactamase; m 99.6 2.4E-14 8.3E-19 110.7 10.6 110 34-152 17-151 (263)
25 4ax1_B Metallo-beta-lactamase 99.5 4E-14 1.4E-18 110.8 9.3 102 44-151 57-183 (303)
26 3rpc_A Possible metal-dependen 99.5 2E-14 7E-19 111.7 5.4 111 29-153 2-135 (264)
27 3adr_A Putative uncharacterize 99.5 7E-14 2.4E-18 107.5 8.2 112 32-152 4-150 (261)
28 1e5d_A Rubredoxin\:oxygen oxid 99.5 8.1E-14 2.8E-18 113.5 8.9 102 44-152 34-148 (402)
29 2qed_A Hydroxyacylglutathione 99.5 3.9E-13 1.3E-17 104.6 11.7 109 31-152 7-119 (258)
30 4ad9_A Lactb2, beta-lactamase- 99.5 4.2E-13 1.4E-17 105.1 11.9 111 34-149 17-144 (289)
31 2p4z_A Metal-dependent hydrola 99.5 2.6E-13 8.9E-18 106.8 9.4 85 29-118 10-103 (284)
32 2xf4_A Hydroxyacylglutathione 99.5 1.6E-13 5.4E-18 102.5 7.8 109 32-150 1-131 (210)
33 1ycg_A Nitric oxide reductase; 99.4 2.9E-13 9.8E-18 110.1 9.2 101 45-152 36-149 (398)
34 2bib_A CBPE, teichoic acid pho 99.4 1.1E-12 3.8E-17 111.5 13.2 112 29-148 3-166 (547)
35 2r2d_A AGR_PTI_140P, Zn-depend 99.4 7.5E-14 2.6E-18 108.3 5.2 97 46-152 44-193 (276)
36 2gcu_A Putative hydroxyacylglu 99.4 1E-12 3.5E-17 101.4 11.4 109 30-151 1-118 (245)
37 4efz_A Metallo-beta-lactamase 99.4 7.5E-13 2.6E-17 104.5 10.9 113 29-152 2-149 (298)
38 3aj3_A MLR6805 protein, 4-pyri 99.4 8.1E-14 2.8E-18 108.1 5.1 79 31-118 3-119 (274)
39 1xm8_A Glyoxalase II; structur 99.4 3E-12 1E-16 99.3 13.6 106 32-151 1-113 (254)
40 2ohh_A Type A flavoprotein FPR 99.4 4.1E-13 1.4E-17 109.4 8.1 102 45-152 35-153 (404)
41 2zo4_A Metallo-beta-lactamase 99.4 2.3E-12 8E-17 101.8 12.1 102 43-151 20-172 (317)
42 3l6n_A Metallo-beta-lactamase; 99.4 5.9E-13 2E-17 99.9 7.7 101 45-152 31-141 (219)
43 3tp9_A Beta-lactamase and rhod 99.4 7.1E-13 2.4E-17 110.9 8.8 113 30-152 2-125 (474)
44 1qh5_A Glyoxalase II, protein 99.4 2.7E-12 9.2E-17 100.0 11.3 106 32-151 1-111 (260)
45 2zwr_A Metallo-beta-lactamase 99.4 6.8E-13 2.3E-17 99.2 7.4 77 32-118 1-80 (207)
46 3dha_A N-acyl homoserine lacto 99.4 2.3E-13 7.8E-18 104.4 3.8 110 31-151 7-174 (254)
47 3hnn_A Putative diflavin flavo 99.4 2.4E-12 8.2E-17 99.8 9.3 99 45-150 43-153 (262)
48 2p18_A Glyoxalase II; metallop 99.4 5.2E-12 1.8E-16 100.7 10.9 120 28-152 25-157 (311)
49 3r2u_A Metallo-beta-lactamase 99.3 2.2E-12 7.4E-17 108.1 8.0 114 29-152 22-145 (466)
50 1m2x_A Class B carbapenemase B 99.3 4.4E-12 1.5E-16 95.6 8.2 98 45-152 27-137 (223)
51 2vw8_A PA1000, PQSE; quinolone 99.3 9.9E-12 3.4E-16 97.8 10.3 104 43-152 22-163 (303)
52 1mqo_A Beta-lactamase II; alph 99.3 7.5E-12 2.6E-16 94.6 7.7 98 45-151 41-150 (227)
53 1a7t_A Metallo-beta-lactamase; 99.3 5.5E-12 1.9E-16 95.7 6.9 98 45-151 37-146 (232)
54 2q9u_A A-type flavoprotein; fl 99.3 9.2E-12 3.2E-16 102.0 7.9 100 45-151 41-153 (414)
55 1p9e_A Methyl parathion hydrol 99.3 3.3E-12 1.1E-16 102.4 4.9 69 46-118 98-175 (331)
56 4dik_A Flavoprotein; TM0755, e 99.3 2.8E-11 9.5E-16 100.1 10.3 99 46-149 53-160 (410)
57 4b87_A DNA cross-LINK repair 1 99.2 7.5E-12 2.6E-16 102.1 4.5 88 46-151 28-121 (367)
58 4hl2_A Beta-lactamase NDM-1; s 99.2 6.9E-12 2.3E-16 95.7 3.8 96 45-151 48-163 (243)
59 1vjn_A Zn-dependent hydrolase 99.2 4E-11 1.4E-15 91.1 7.6 78 46-153 21-98 (220)
60 3iog_A Beta-lactamase; hydrola 99.2 5.2E-11 1.8E-15 89.4 7.3 78 34-118 12-93 (227)
61 3esh_A Protein similar to meta 99.2 9.2E-12 3.2E-16 97.1 2.9 70 46-118 49-137 (280)
62 3q6v_A Beta-lactamase; metallo 99.1 5.1E-11 1.7E-15 89.8 5.6 78 34-118 15-96 (233)
63 2fhx_A SPM-1; metallo-beta-lac 99.1 1.9E-10 6.4E-15 87.6 8.7 100 44-152 29-167 (246)
64 3h3e_A Uncharacterized protein 99.1 1.5E-10 5E-15 90.8 6.0 74 30-118 11-92 (267)
65 2y8b_A Metallo-B-lactamase; hy 99.1 4.9E-10 1.7E-14 86.9 8.7 97 45-151 68-179 (265)
66 1jjt_A IMP-1 metallo beta-lact 98.9 8.4E-10 2.9E-14 83.5 5.5 64 45-118 33-102 (228)
67 2p97_A Hypothetical protein; p 98.9 5.5E-09 1.9E-13 77.7 9.1 94 44-152 23-121 (201)
68 3zdk_A 5' exonuclease apollo; 98.8 1.2E-09 4.2E-14 88.1 3.1 82 53-153 8-102 (336)
69 4eyb_A Beta-lactamase NDM-1; m 98.7 9.1E-09 3.1E-13 80.0 4.8 65 45-118 75-145 (270)
70 2cfu_A SDSA1; SDS-hydrolase, l 98.6 2.7E-08 9.2E-13 86.6 4.2 75 43-118 121-200 (658)
71 2yhe_A SEC-alkyl sulfatase; hy 97.9 1.7E-08 5.9E-13 88.0 0.0 73 44-117 132-209 (668)
72 2bsz_A Arylamine N-acetyltrans 38.1 26 0.00088 26.8 3.3 20 46-65 113-132 (278)
73 3izc_q 60S ribosomal protein R 36.7 12 0.0004 18.0 0.7 14 11-24 11-24 (25)
74 1w4t_A Arylamine N-acetyltrans 36.5 25 0.00085 27.2 3.0 20 47-66 135-154 (299)
75 1e2t_A NAT, N-hydroxyarylamine 36.0 24 0.00083 27.0 2.9 20 46-65 111-130 (284)
76 2ija_A Arylamine N-acetyltrans 35.5 25 0.00085 27.1 2.9 22 45-66 112-133 (295)
77 3iz5_q 60S ribosomal protein L 35.2 12 0.00041 17.9 0.6 13 12-24 12-24 (25)
78 3lnb_A N-acetyltransferase fam 33.6 29 0.00098 27.1 3.0 21 45-65 138-158 (309)
79 1eiw_A Hypothetical protein MT 31.6 25 0.00086 23.2 2.0 21 79-99 4-24 (111)
80 2vfb_A Arylamine N-acetyltrans 23.4 40 0.0014 25.7 2.1 21 46-66 111-133 (280)
81 1w5r_A Arylamine N-acetyltrans 22.5 39 0.0013 25.7 1.9 19 47-65 115-135 (278)
82 3d9w_A Putative acetyltransfer 21.1 39 0.0014 26.0 1.7 19 46-64 120-140 (293)
No 1
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.93 E-value=8.7e-26 Score=184.62 Aligned_cols=123 Identities=26% Similarity=0.373 Sum_probs=102.0
Q ss_pred eEEEEEecCCC-----CCCcEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCC
Q psy16255 32 VNLQVLGSGAR-----GAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG 106 (156)
Q Consensus 32 m~l~~LGtg~~-----~~~~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~ 106 (156)
|+|+|||||++ ++.+|++|+.++..+|||||+|+++++.+.++++.+|++|||||.|+||++|++.|+.++...+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~ 80 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQS 80 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhcc
Confidence 78999999996 4678999999999999999999999999999999999999999999999999999987765433
Q ss_pred C-----CceEEEcCccc--ccc----------cceeeEEEcCC---------------------------C---------
Q psy16255 107 V-----PEINLHGPEGL--VSE----------NMGLASNSISP---------------------------S--------- 133 (156)
Q Consensus 107 ~-----~~l~Iygp~~~--~l~----------~~~~~~~~~~~---------------------------~--------- 133 (156)
+ .+++||||+++ +++ .+.+.++++.+ +
T Consensus 81 ~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 160 (368)
T 3zwf_A 81 GSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEE 160 (368)
T ss_dssp ------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTT
T ss_pred ccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCccccccccccccccccccccCccccccccccccccc
Confidence 2 47999999998 332 13456666643 2
Q ss_pred ---CCeEeCCEEEEEEEcCCCCCC
Q psy16255 134 ---DPALIQARTLMKIPLRPRLPL 154 (156)
Q Consensus 134 ---~~~~~~~~~V~~~~~~H~~p~ 154 (156)
..+++++++|+++|+.|++|+
T Consensus 161 ~~~~~~~~~~~~V~a~~~~H~vp~ 184 (368)
T 3zwf_A 161 NSYLLFDDEQFVVKAFRLFHRIPS 184 (368)
T ss_dssp TBEEEEECSSEEEEEEEEESSSCE
T ss_pred CceeEEeCCCEEEEEEeccCCCce
Confidence 134568999999999999886
No 2
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.92 E-value=5.2e-25 Score=174.07 Aligned_cols=124 Identities=28% Similarity=0.417 Sum_probs=105.2
Q ss_pred eeEEEEEecCCC-----CCCcEEEEEE----CCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHH
Q psy16255 31 IVNLQVLGSGAR-----GAPKSLYLFT----DQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALT 101 (156)
Q Consensus 31 ~m~l~~LGtg~~-----~~~~s~~I~~----~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~ 101 (156)
||+|+|||||++ ++.+|++|+. ++..+|||||+++.+++.+.++++.+|++|||||.|+||++|++.++..
T Consensus 1 ~m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~ 80 (306)
T 2cbn_A 1 AMNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCS 80 (306)
T ss_dssp CCEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHH
T ss_pred CeEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHH
Confidence 589999999997 3568999998 7889999999999988888888889999999999999999999999876
Q ss_pred HhhCCC-CceEEEcCccc--ccc----------cceeeEEEcCCCCCeEeCCEEEEEEEcCCCCCC
Q psy16255 102 IQDVGV-PEINLHGPEGL--VSE----------NMGLASNSISPSDPALIQARTLMKIPLRPRLPL 154 (156)
Q Consensus 102 ~~~~~~-~~l~Iygp~~~--~l~----------~~~~~~~~~~~~~~~~~~~~~V~~~~~~H~~p~ 154 (156)
+...++ .+++||+|+.+ +++ .+.+++++++++..+++++++|+++|+.|+.++
T Consensus 81 ~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~H~~~~ 146 (306)
T 2cbn_A 81 RSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLEC 146 (306)
T ss_dssp HHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECBSSSCC
T ss_pred HHhcCCCCCeEEEcCccHHHHHHHHHHhhccCCCceEEEEEcCCCcEeecCCEEEEEEEccCCCCc
Confidence 544333 57999999987 322 134577889999899999999999999998764
No 3
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.91 E-value=4.6e-24 Score=169.92 Aligned_cols=123 Identities=27% Similarity=0.336 Sum_probs=104.0
Q ss_pred eEEEEEecCCC-----CCCcEEEEEE---CCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHh
Q psy16255 32 VNLQVLGSGAR-----GAPKSLYLFT---DQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQ 103 (156)
Q Consensus 32 m~l~~LGtg~~-----~~~~s~~I~~---~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~ 103 (156)
|+|+|||||++ ++.+|++|+. ++..+|||||+++.+++.+.++++.+|++|||||.|+||++|++.|+..+.
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~ 80 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRS 80 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHH
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHH
Confidence 68999999997 3578999998 889999999999988888888888899999999999999999999987654
Q ss_pred hCCC-CceEEEcCccc--ccc----------cceeeEEEcCCCCCeEeCCEEEEEEEcCCCCCC
Q psy16255 104 DVGV-PEINLHGPEGL--VSE----------NMGLASNSISPSDPALIQARTLMKIPLRPRLPL 154 (156)
Q Consensus 104 ~~~~-~~l~Iygp~~~--~l~----------~~~~~~~~~~~~~~~~~~~~~V~~~~~~H~~p~ 154 (156)
..++ .+++||+|+.+ +++ .+.++++++++++.+++++++|+++|+.|+.++
T Consensus 81 ~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~~H~~~~ 144 (320)
T 1y44_A 81 FQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEA 144 (320)
T ss_dssp HTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECBSSSSB
T ss_pred hcCCCCCEEEEeCHHHHHHHHHHHHhhccCCCCceEEEEcCCCceEecCCEEEEEEEccCCCCc
Confidence 4333 47999999987 332 124577888998899999999999999998763
No 4
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.90 E-value=1.6e-23 Score=168.51 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=96.1
Q ss_pred CeeEEEEEecCCC-------------------------CCCcEEEEEECCeE-EEEecCchHHHHHHHcC-------CCc
Q psy16255 30 GIVNLQVLGSGAR-------------------------GAPKSLYLFTDQSR-YLFNCGEGTQRLAHEHK-------MKL 76 (156)
Q Consensus 30 ~~m~l~~LGtg~~-------------------------~~~~s~~I~~~~~~-iLiD~G~g~~~~l~~~~-------~~~ 76 (156)
|||+|+|||||++ |+.+|++|+.++.. +|||||+++..++.+.+ +++
T Consensus 1 ~~M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~ 80 (321)
T 3jxp_A 1 MMMYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIRAQLQAFAPMQPARALRD 80 (321)
T ss_dssp -CEEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHHHHHHTCGGGCCCSSSSC
T ss_pred CeEEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHHHHHHhcccccccccCCc
Confidence 6799999999986 23479999988775 99999999988887754 467
Q ss_pred CCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--ccc-cc-----------eeeEEEcCCCCCeEe---C
Q psy16255 77 AKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSE-NM-----------GLASNSISPSDPALI---Q 139 (156)
Q Consensus 77 ~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~-~~-----------~~~~~~~~~~~~~~~---~ 139 (156)
.+|++|||||.|+||++|++.|.. ..+++||+|+.+ .++ .+ .++++++++++.+++ +
T Consensus 81 ~~i~~i~lTH~H~DH~~gl~~l~~------~~~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~ 154 (321)
T 3jxp_A 81 TGINAIVLLDSQIDHTTGLLSLRE------GCPHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACP 154 (321)
T ss_dssp CSEEEEECSCCCHHHHGGGGGGGG------GCCEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTST
T ss_pred ccCCEEEECCCChhhhhhHHHHHh------cCCCeEEECHHHHHHHHhhCccccccccccCceeEEEcCCCCeEEeccCC
Confidence 899999999999999999987732 247999999988 333 11 257888999999999 9
Q ss_pred CEEEEEEEcCCCC
Q psy16255 140 ARTLMKIPLRPRL 152 (156)
Q Consensus 140 ~~~V~~~~~~H~~ 152 (156)
+++|++++++|++
T Consensus 155 ~~~V~~~~v~H~~ 167 (321)
T 3jxp_A 155 NLKFTPFPLRSAA 167 (321)
T ss_dssp TEEEEEEEECCCC
T ss_pred CeEEEEEEecCCc
Confidence 9999999998654
No 5
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.88 E-value=8.5e-22 Score=153.23 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=101.5
Q ss_pred CCCeeEEEEEecCCC-----CCCcEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHH
Q psy16255 28 VPGIVNLQVLGSGAR-----GAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTI 102 (156)
Q Consensus 28 ~~~~m~l~~LGtg~~-----~~~~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~ 102 (156)
.+.+|+|++||+|++ ++.+|++|+.++..+|||||.+...++.+. +++.+|++|||||.|+||++|++.+....
T Consensus 21 ~~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~~~~l~~~-~~~~~i~~v~iTH~H~DH~~gl~~l~~~~ 99 (268)
T 1zkp_A 21 QSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLAQLQKY-ITPSDIDAVVLSHYHHDHVADIGVLQYAR 99 (268)
T ss_dssp CSSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTHHHHHTTT-CCGGGCCEEECSCCCHHHHTTHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHHHHHHHHh-CCcccCCEEEEecCCchhhCCHHHHHHHH
Confidence 456799999999885 357899999999999999999988888776 77889999999999999999999887642
Q ss_pred hh-----CCCCceEEEcCccc--ccccc----eeeEEEcCCCCCeEeCCEEEEEEEcCCCCC
Q psy16255 103 QD-----VGVPEINLHGPEGL--VSENM----GLASNSISPSDPALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 103 ~~-----~~~~~l~Iygp~~~--~l~~~----~~~~~~~~~~~~~~~~~~~V~~~~~~H~~p 153 (156)
.. ....+++||+|+.+ +++.. ....+++++++.+++++++|+++++.|+.+
T Consensus 100 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~ 161 (268)
T 1zkp_A 100 LITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTVHPVT 161 (268)
T ss_dssp HHHHHHHCCCCCEEEEECSSSHHHHHTTCBTTTEEEEECCTTSCEEETTEEEEEEECCSSSC
T ss_pred HhcccccCCCCceEEEeCccHHHHHHhcccCCccceEEecCCCeEEECCEEEEEEECCCCCC
Confidence 22 12346999999987 33322 135677888999999999999999999754
No 6
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.88 E-value=4.1e-22 Score=157.62 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=98.4
Q ss_pred cCCCCCeeEEEEEecCCC---------------------CCCcEEEEEE--CC---eEEEEecCchHHHHHHHcCCCcCC
Q psy16255 25 MKYVPGIVNLQVLGSGAR---------------------GAPKSLYLFT--DQ---SRYLFNCGEGTQRLAHEHKMKLAK 78 (156)
Q Consensus 25 ~~~~~~~m~l~~LGtg~~---------------------~~~~s~~I~~--~~---~~iLiD~G~g~~~~l~~~~~~~~~ 78 (156)
++..+.+|+|+|||+|++ |+.+|++|+. ++ ..+|||||++++.++.+.++ .+
T Consensus 22 ~~~~~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~~~~~l~~~~~--~~ 99 (293)
T 3md7_A 22 MTSPRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRMQMIDSGV--HM 99 (293)
T ss_dssp --CCCSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHHHHHHHHTC--CC
T ss_pred cccCCCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCccHHHHHHhcCC--Cc
Confidence 344667899999999985 2238999995 44 79999999999999887654 68
Q ss_pred cCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--cccc-------------c--eeeEEEcCCCCCeEeCC-
Q psy16255 79 LDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSEN-------------M--GLASNSISPSDPALIQA- 140 (156)
Q Consensus 79 i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~~-------------~--~~~~~~~~~~~~~~~~~- 140 (156)
|++|||||.|+||++|++.|...+.. ...+++||+|+.+ .++. + .++++++++++.+++++
T Consensus 100 id~IliTH~H~DHi~Gl~~l~~~~~~-~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~g~~ 178 (293)
T 3md7_A 100 LDAAVYTHPHADHIHGIDDLRTYVVD-NGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGA 178 (293)
T ss_dssp CSEEECSCCCHHHHTTGGGGHHHHHH-HTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCCCCCEEEEECCTTCCEEECCT
T ss_pred ccEEEEcCCCchhhCCHHHHHHHhhc-CCCceEEEECHHHHHHHHHhhhhhhccccccCCCCceEEEEcCCCCcEEECCC
Confidence 99999999999999999988654322 2457999999887 2211 1 14678889999999999
Q ss_pred ---EEEEEEEcCCC
Q psy16255 141 ---RTLMKIPLRPR 151 (156)
Q Consensus 141 ---~~V~~~~~~H~ 151 (156)
++|+++++.|.
T Consensus 179 ~~~~~v~~~~~~H~ 192 (293)
T 3md7_A 179 GGAIRFEPFSQVHG 192 (293)
T ss_dssp TCCEEEEEEEEEET
T ss_pred CCcEEEEEEEecCC
Confidence 99999999997
No 7
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.84 E-value=1.6e-20 Score=145.71 Aligned_cols=116 Identities=17% Similarity=0.186 Sum_probs=89.2
Q ss_pred CeeEEEEEecCCCC-----------------------CCcEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcC
Q psy16255 30 GIVNLQVLGSGARG-----------------------APKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQ 86 (156)
Q Consensus 30 ~~m~l~~LGtg~~~-----------------------~~~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH 86 (156)
|.|+|+|||||++. +.+|++|+.++..+|||||.+..++ .+.+.+|++|||||
T Consensus 1 m~~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~~~~~iLiD~G~~~~~~----~~~~~~id~IliTH 76 (258)
T 3g1p_A 1 MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLAD----RWSPGSFQQFLLTH 76 (258)
T ss_dssp -CEEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEETTEEEEECCCCTTHHH----HCCTTSSCEEECSC
T ss_pred CceEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEECCcEEEEECCchHHHh----hcCcccCCEEEEcc
Confidence 56899999999652 4689999999999999999654332 24557899999999
Q ss_pred CChhhhcChHHHHHHHhhCCCCceEEEcCcccc--cccc---e-eeE-EEcCCCCCeEeCCEEEEEEEcCCCCC
Q psy16255 87 PVWENLGGLLGLALTIQDVGVPEINLHGPEGLV--SENM---G-LAS-NSISPSDPALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 87 ~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~~--l~~~---~-~~~-~~~~~~~~~~~~~~~V~~~~~~H~~p 153 (156)
.|+||++|++.+.. ....+++||+|+.+. .+.+ . .++ +++++++.+++++++|+++++.|+.+
T Consensus 77 ~H~DHi~gl~~l~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~ 146 (258)
T 3g1p_A 77 YHMDHVQGLFPLRW----GVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKL 146 (258)
T ss_dssp CCHHHHGGGTTTTT----CSSSCEEEEECCCSSCSTTTTTSCTTEEEEEECCTTCCEEETTEEEEEEECCSSSC
T ss_pred CchhHhCCHHHHhc----cCCCCeEEEeChhhhhHHHHhcCCCccccccccCCCCeEEECCEEEEEEECCCCCC
Confidence 99999999976621 122369999998872 1111 1 233 57889999999999999999999865
No 8
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.76 E-value=1.7e-18 Score=143.17 Aligned_cols=116 Identities=9% Similarity=0.058 Sum_probs=90.9
Q ss_pred CeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHHH----------HHHHc---------------------CCCcCC
Q psy16255 30 GIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQR----------LAHEH---------------------KMKLAK 78 (156)
Q Consensus 30 ~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~~----------~l~~~---------------------~~~~~~ 78 (156)
.+|+|++||+++.-..+|++|+.++..+|||||.+... ++... +.+..+
T Consensus 5 ~~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~ 84 (429)
T 2az4_A 5 AKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQ 84 (429)
T ss_dssp CCEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCS
T ss_pred CceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhcccc
Confidence 35899999998876678999999999999999987621 12111 356678
Q ss_pred cCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--cccc-----------------ceeeEEEcCCCCCeEeC
Q psy16255 79 LDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSEN-----------------MGLASNSISPSDPALIQ 139 (156)
Q Consensus 79 i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~~-----------------~~~~~~~~~~~~~~~~~ 139 (156)
|++|||||.|+||++|++.|. ++++||+++.+ +++. ...+++.+++++.++++
T Consensus 85 i~~v~lTH~H~DHiggl~~l~--------~~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g 156 (429)
T 2az4_A 85 HTAVFLSHAHLDHSRMINYLD--------PAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVG 156 (429)
T ss_dssp EEEEECSCSCHHHHTTGGGBC--------TTSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEET
T ss_pred CCEEEECCchHHHhCcHhHhc--------CCCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEEC
Confidence 999999999999999998763 15789999877 2211 12356678889999999
Q ss_pred CEEEEEEEcCCCCC
Q psy16255 140 ARTLMKIPLRPRLP 153 (156)
Q Consensus 140 ~~~V~~~~~~H~~p 153 (156)
+++|+++++.|++|
T Consensus 157 ~~~v~~~~~~H~~~ 170 (429)
T 2az4_A 157 EISVEIVPVDHDAY 170 (429)
T ss_dssp TEEEEEEECCCSST
T ss_pred CEEEEEEECCCCCh
Confidence 99999999999776
No 9
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.76 E-value=8.7e-19 Score=150.06 Aligned_cols=127 Identities=15% Similarity=0.096 Sum_probs=96.0
Q ss_pred CCCCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHHHH-----------HHHcCCCcCCcCeEEEcCCChhhhcCh
Q psy16255 27 YVPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRL-----------AHEHKMKLAKLDSVFITQPVWENLGGL 95 (156)
Q Consensus 27 ~~~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~~~-----------l~~~~~~~~~i~~IfiTH~H~DHi~GL 95 (156)
.....|++++||+++....+|++|+.++..+|||||.++... +.....+..+|++|||||.|.||++|+
T Consensus 12 ~~~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl 91 (562)
T 3bk2_A 12 GPQDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGL 91 (562)
T ss_dssp --CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTH
T ss_pred CCCCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCH
Confidence 345568999999877666789999999999999999642210 111122456899999999999999999
Q ss_pred HHHHHHHhhCCCCceEEEcCccc--cccc------c---eeeEEEcCCCCCeEeCC-EEEEEEEcCCCCCC
Q psy16255 96 LGLALTIQDVGVPEINLHGPEGL--VSEN------M---GLASNSISPSDPALIQA-RTLMKIPLRPRLPL 154 (156)
Q Consensus 96 ~~l~~~~~~~~~~~l~Iygp~~~--~l~~------~---~~~~~~~~~~~~~~~~~-~~V~~~~~~H~~p~ 154 (156)
+.|+..+. ....+++||+++.+ +++. + ...++++++++.+++++ ++|+++++.|.+|.
T Consensus 92 ~~L~~~~~-~~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~g 161 (562)
T 3bk2_A 92 PFLLPMIF-GKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPD 161 (562)
T ss_dssp HHHHHHHH-CSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSS
T ss_pred HHHHHhhc-cccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcc
Confidence 99987553 22336899999987 3221 1 34678889999999999 99999999998763
No 10
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.75 E-value=6.5e-18 Score=131.27 Aligned_cols=115 Identities=17% Similarity=0.313 Sum_probs=87.3
Q ss_pred eEEEEEecCCCCCCcEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHh-hC--CCC
Q psy16255 32 VNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQ-DV--GVP 108 (156)
Q Consensus 32 m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~-~~--~~~ 108 (156)
|+++.+..|+ .++|++| ++..+|||||++...++. ..+.++++|||||.|+||++|++.|+.... .. +.+
T Consensus 1 m~i~~~~~g~--~~~~~~i--~~~~iLiD~G~~~~~~l~---~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~ 73 (280)
T 2e7y_A 1 MNIIGFSKAL--FSTWIYY--SPERILFDAGEGVSTTLG---SKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREK 73 (280)
T ss_dssp CCEEEEEETT--TEEEEEE--GGGTEEEEECTTHHHHHG---GGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCC
T ss_pred CEEEEEecCC--ceEEEEE--CCcEEEEECCcchHHHhc---cCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCC
Confidence 4577777654 3467777 577899999999876553 345789999999999999999998864322 11 234
Q ss_pred ceEEEcCccc-cccc-------------ceeeEEEcCCCCCeEeC-----CEEEEEEEcCCCCC
Q psy16255 109 EINLHGPEGL-VSEN-------------MGLASNSISPSDPALIQ-----ARTLMKIPLRPRLP 153 (156)
Q Consensus 109 ~l~Iygp~~~-~l~~-------------~~~~~~~~~~~~~~~~~-----~~~V~~~~~~H~~p 153 (156)
+++||+|+.+ +++. +.++++.+++++.++++ +++|+++++.|+.+
T Consensus 74 ~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~ 137 (280)
T 2e7y_A 74 PLDVFYPEGNRAVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSS 137 (280)
T ss_dssp CEEEEEETTCHHHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSS
T ss_pred CCEEEECccHHHHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCC
Confidence 6999999876 2221 12467888999999998 89999999999976
No 11
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.72 E-value=1.1e-17 Score=138.97 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=91.7
Q ss_pred eEEEEEecCCCCCCcEEEEEECCeEEEEecCchHH----HHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCC
Q psy16255 32 VNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ----RLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGV 107 (156)
Q Consensus 32 m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~----~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~ 107 (156)
|+|++||+++...++|++|+.++..+|||||.... ..+...++++.+|++|||||.|+||++|++.|... .
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~-----~ 75 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE-----G 75 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT-----T
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc-----C
Confidence 78999999988777999999999999999998221 12233566778999999999999999999988642 1
Q ss_pred CceEEEcCccc--cccc-------------ce--------eeEEEcCCCCCeEeCCEEEEEEEcCCCCC
Q psy16255 108 PEINLHGPEGL--VSEN-------------MG--------LASNSISPSDPALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 108 ~~l~Iygp~~~--~l~~-------------~~--------~~~~~~~~~~~~~~~~~~V~~~~~~H~~p 153 (156)
...+||+++.+ +++. +. -.++.++.++.+++++++|+++++.|...
T Consensus 76 ~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~G 144 (431)
T 3iek_A 76 YRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPG 144 (431)
T ss_dssp CCSCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTT
T ss_pred CCCeEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcC
Confidence 24689999887 2210 00 14677888999999999999999999653
No 12
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.69 E-value=3.1e-17 Score=140.34 Aligned_cols=119 Identities=15% Similarity=0.098 Sum_probs=92.1
Q ss_pred CeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHHHH-----------HHHcCCCcCCcCeEEEcCCChhhhcChHHH
Q psy16255 30 GIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRL-----------AHEHKMKLAKLDSVFITQPVWENLGGLLGL 98 (156)
Q Consensus 30 ~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~~~-----------l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l 98 (156)
..|++.+||..+.-..+|++|+.++..+|||||.++... +...+.+..++++|||||.|+||++|++.+
T Consensus 7 ~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l 86 (555)
T 3zq4_A 7 DQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYL 86 (555)
T ss_dssp CSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHH
T ss_pred CcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHH
Confidence 458899998776556789999999999999999754211 112223567899999999999999999988
Q ss_pred HHHHhhCCCCceEEEcCccc--cccc------c--eeeEEEcCCCCCeEeCCEEEEEEEcCCCCCC
Q psy16255 99 ALTIQDVGVPEINLHGPEGL--VSEN------M--GLASNSISPSDPALIQARTLMKIPLRPRLPL 154 (156)
Q Consensus 99 ~~~~~~~~~~~l~Iygp~~~--~l~~------~--~~~~~~~~~~~~~~~~~~~V~~~~~~H~~p~ 154 (156)
+.. ..++||+++.+ +++. + ...++.++.++.+++++++|+++++.|.+|.
T Consensus 87 ~~~------~~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pg 146 (555)
T 3zq4_A 87 LRQ------VNIPVYGGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPD 146 (555)
T ss_dssp HTT------CCCCEEECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSS
T ss_pred HHh------cCceEEECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcC
Confidence 642 24679999987 2221 1 2467888999999999999999999997764
No 13
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.69 E-value=6.8e-17 Score=134.90 Aligned_cols=122 Identities=11% Similarity=0.065 Sum_probs=91.5
Q ss_pred CCCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHH----HHHHH-cCCCcCCcCeEEEcCCChhhhcChHHHHHHH
Q psy16255 28 VPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ----RLAHE-HKMKLAKLDSVFITQPVWENLGGLLGLALTI 102 (156)
Q Consensus 28 ~~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~----~~l~~-~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~ 102 (156)
.+.+|+|++||+|+....+|++|+.++..+|||||.+.. ..+.. .++++.+|++|||||.|+||++|++.+....
T Consensus 8 ~~~~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~ 87 (459)
T 2i7t_A 8 ESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT 87 (459)
T ss_dssp -CEEEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHS
T ss_pred CCCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhc
Confidence 456799999999987778999999999999999997521 11111 1467789999999999999999999886543
Q ss_pred hhCCCCceEEEcCccc--c----ccc-------------c--------eeeEEEcCCCCCeEeCCEEEEEEEcCCCCC
Q psy16255 103 QDVGVPEINLHGPEGL--V----SEN-------------M--------GLASNSISPSDPALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 103 ~~~~~~~l~Iygp~~~--~----l~~-------------~--------~~~~~~~~~~~~~~~~~~~V~~~~~~H~~p 153 (156)
. .+.+||+++.+ + +.. + .-.++.++.++.+++++++|++++..|...
T Consensus 88 ~----~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~G 161 (459)
T 2i7t_A 88 S----FKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLG 161 (459)
T ss_dssp S----CCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTT
T ss_pred C----CCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccC
Confidence 1 13578988765 1 110 0 014567788889999999999999999853
No 14
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.66 E-value=6.5e-16 Score=133.98 Aligned_cols=120 Identities=19% Similarity=0.116 Sum_probs=91.9
Q ss_pred CCCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHH-----HHHHHc---CCCcCCcCeEEEcCCChhhhcChHHHH
Q psy16255 28 VPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ-----RLAHEH---KMKLAKLDSVFITQPVWENLGGLLGLA 99 (156)
Q Consensus 28 ~~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~-----~~l~~~---~~~~~~i~~IfiTH~H~DHi~GL~~l~ 99 (156)
.+..|++++||+++....+|++|+.++..+|||||.+.. ..+... +.++.+|++|||||.|+||++|++.|+
T Consensus 176 ~~~~m~i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~ 255 (636)
T 2ycb_A 176 DNDWARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLY 255 (636)
T ss_dssp CCCCCEEEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHH
T ss_pred CCCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHH
Confidence 346689999999887667899999999999999998742 222212 367789999999999999999999886
Q ss_pred HHHhhCCCCceEEEcCccc--cc----cc-----------ce----------eeEEEcCCCCCeEe-CCEEEEEEEcCCC
Q psy16255 100 LTIQDVGVPEINLHGPEGL--VS----EN-----------MG----------LASNSISPSDPALI-QARTLMKIPLRPR 151 (156)
Q Consensus 100 ~~~~~~~~~~l~Iygp~~~--~l----~~-----------~~----------~~~~~~~~~~~~~~-~~~~V~~~~~~H~ 151 (156)
.. ....+||+++.+ ++ .. .. -.++.++.++.+++ ++++|++++..|.
T Consensus 256 ~~-----~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~ 330 (636)
T 2ycb_A 256 HY-----GYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHI 330 (636)
T ss_dssp HT-----TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSS
T ss_pred hc-----CCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCC
Confidence 42 124689999877 21 10 01 13577888899999 9999999999994
Q ss_pred C
Q psy16255 152 L 152 (156)
Q Consensus 152 ~ 152 (156)
.
T Consensus 331 ~ 331 (636)
T 2ycb_A 331 L 331 (636)
T ss_dssp T
T ss_pred C
Confidence 3
No 15
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.66 E-value=8.3e-16 Score=125.72 Aligned_cols=117 Identities=15% Similarity=0.247 Sum_probs=85.2
Q ss_pred CCCCeeEEEEEecCCCCCCcEEEEEEC-CeEEEEe--cCchHH----------HHHHH---------------cCCC---
Q psy16255 27 YVPGIVNLQVLGSGARGAPKSLYLFTD-QSRYLFN--CGEGTQ----------RLAHE---------------HKMK--- 75 (156)
Q Consensus 27 ~~~~~m~l~~LGtg~~~~~~s~~I~~~-~~~iLiD--~G~g~~----------~~l~~---------------~~~~--- 75 (156)
..+..|+++++|+ +|++|+.+ +..+||| ||+|.. .++.+ ..++
T Consensus 57 ~~~~~~~it~lG~------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~ 130 (379)
T 3bv6_A 57 VEPNTFSMWWLGC------TGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFA 130 (379)
T ss_dssp CCTTCEEEEEEET------TEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGG
T ss_pred CCCCceEEEEecc------cEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHH
Confidence 5567799999986 59999996 8999999 888752 01111 1233
Q ss_pred cCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--cccccee---eEEEcCCCCCeEeCCEEEEEEEcCC
Q psy16255 76 LAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSENMGL---ASNSISPSDPALIQARTLMKIPLRP 150 (156)
Q Consensus 76 ~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~~~~~---~~~~~~~~~~~~~~~~~V~~~~~~H 150 (156)
+.++++|||||.|+||+ |++.+...... ..+.++||+|.++ +++...+ +++.+++++.+++++++|+++++.|
T Consensus 131 ~~~iD~IliTH~H~DHi-g~~~l~~l~~~-~~~~~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H 208 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHI-DVNVAAAVLQN-CGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFD 208 (379)
T ss_dssp CCCCSEEECSBCSGGGC-CHHHHHHHHHH-SCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCC
T ss_pred CCCCCEEEECCCCcccC-ChHHHHHHHhc-CCCCcEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEECCEEEEEEeccc
Confidence 46799999999999999 56554321111 1126899999887 4443222 5788899999999999999999998
Q ss_pred C
Q psy16255 151 R 151 (156)
Q Consensus 151 ~ 151 (156)
+
T Consensus 209 ~ 209 (379)
T 3bv6_A 209 R 209 (379)
T ss_dssp H
T ss_pred c
Confidence 5
No 16
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.65 E-value=7.1e-16 Score=134.06 Aligned_cols=121 Identities=16% Similarity=0.046 Sum_probs=90.9
Q ss_pred CCCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHH------HHHHHcC---C--Cc--CCcCeEEEcCCChhhhcC
Q psy16255 28 VPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ------RLAHEHK---M--KL--AKLDSVFITQPVWENLGG 94 (156)
Q Consensus 28 ~~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~------~~l~~~~---~--~~--~~i~~IfiTH~H~DHi~G 94 (156)
.+..|++++||+++....+|++|+.++..+|||||.+.. ..+...+ + ++ .+|++|||||.|+||++|
T Consensus 185 ~~~~m~i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGg 264 (651)
T 3af5_A 185 KSRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGM 264 (651)
T ss_dssp CCSCEEEEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTT
T ss_pred CCCceEEEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcC
Confidence 456799999999987667899999999999999998743 1221112 2 45 789999999999999999
Q ss_pred hHHHHHHHhhCCCCceEEEcCccc--cccc---------------ce----------eeEEEcCCCCCeEe-CCEEEEEE
Q psy16255 95 LLGLALTIQDVGVPEINLHGPEGL--VSEN---------------MG----------LASNSISPSDPALI-QARTLMKI 146 (156)
Q Consensus 95 L~~l~~~~~~~~~~~l~Iygp~~~--~l~~---------------~~----------~~~~~~~~~~~~~~-~~~~V~~~ 146 (156)
++.|+.. +....+||+++.+ +++. .. ..++.++.++.+++ ++++|+++
T Consensus 265 lp~L~~~----~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~ 340 (651)
T 3af5_A 265 LPYLFRY----NLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLH 340 (651)
T ss_dssp HHHHHHT----TCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEE
T ss_pred HHHHHhc----CCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEe
Confidence 9988641 1014689999877 2110 01 13577888999999 99999999
Q ss_pred EcCCCC
Q psy16255 147 PLRPRL 152 (156)
Q Consensus 147 ~~~H~~ 152 (156)
+..|..
T Consensus 341 ~~gH~~ 346 (651)
T 3af5_A 341 NAGHIL 346 (651)
T ss_dssp ECSSST
T ss_pred cCCCCc
Confidence 999953
No 17
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.63 E-value=1.8e-15 Score=116.34 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=86.3
Q ss_pred cCCCCCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhh
Q psy16255 25 MKYVPGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQD 104 (156)
Q Consensus 25 ~~~~~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~ 104 (156)
++..+..|+|+++|. +|++|+.++..+|||||.+... -.++.++++|||||.|.||+ |+..+...
T Consensus 23 ~~~~~~~~~it~lg~------s~~li~~~~~~iliDpg~~~~~-----~~~~~~id~VliTH~H~DH~-~~~~l~~~--- 87 (235)
T 3kl7_A 23 KTKSGKELTITFIKH------GSLMLTYDNHSIQVDPVSEYAD-----YTTFPKADIILITHEHGDHL-DPKAIQAV--- 87 (235)
T ss_dssp ECTTSCEEEEEEEET------TEEEEEETTEEEEESCCTTTCC-----TTSSCCCSEEEECCSSTTTC-CHHHHHHH---
T ss_pred CCCCCCCeEEEEEcc------eEEEEEECCEEEEECCCCCccc-----hhhCCCCCEEEECCCccccC-CHHHHHHh---
Confidence 344678899999997 6999999999999999987531 12456899999999999999 77666432
Q ss_pred CCCCceEEEcCccc--ccccceeeEEEcCCCC-CeEeCCEEEEEEEcCCCCC
Q psy16255 105 VGVPEINLHGPEGL--VSENMGLASNSISPSD-PALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 105 ~~~~~l~Iygp~~~--~l~~~~~~~~~~~~~~-~~~~~~~~V~~~~~~H~~p 153 (156)
....++||+|+++ .++. .+.+++++ .+++++++|+++|+.|..+
T Consensus 88 -~~~~~~v~~~~~~~~~l~~----~~~l~~g~~~~~~g~~~i~~~p~~H~~~ 134 (235)
T 3kl7_A 88 -EKSDTEIIANENSQKKLGK----GKVLKNGDTDTSISYMKIEAVPAYNTTP 134 (235)
T ss_dssp -CCTTCEEEECHHHHHHHTC----SEECCTTCEECCSTTCEEEEEECCCCST
T ss_pred -hcCCCEEEEcHHHHHHhcC----cEEecCCCEEEEECCEEEEEEEeecCCC
Confidence 1346899999987 4442 35678888 8999999999999999864
No 18
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.62 E-value=3.9e-16 Score=135.46 Aligned_cols=119 Identities=17% Similarity=0.121 Sum_probs=90.3
Q ss_pred CCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHHH---HHHHc---CC-CcCCcCeEEEcCCChhhhcChHHHHHH
Q psy16255 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQR---LAHEH---KM-KLAKLDSVFITQPVWENLGGLLGLALT 101 (156)
Q Consensus 29 ~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~~---~l~~~---~~-~~~~i~~IfiTH~H~DHi~GL~~l~~~ 101 (156)
...|+|++||+++....+|++|+.++..+|||||.+... .+... ++ ++.+|++|||||.|+||++|++.|+..
T Consensus 181 ~~~m~I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~ 260 (640)
T 2xr1_A 181 DQWVRVTALGGCKEVGRSCFLLSTPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY 260 (640)
T ss_dssp CCCCEEEEEECSSSSBCCEEEEECSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT
T ss_pred CCceEEEEEecCCCCCCcEEEEEECCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhc
Confidence 356899999998876678999999999999999987421 11111 25 677899999999999999999988642
Q ss_pred HhhCCCCceEEEcCccc--cc----cc-----------cee----------eEEEcCCCCCeEe-CCEEEEEEEcCCCC
Q psy16255 102 IQDVGVPEINLHGPEGL--VS----EN-----------MGL----------ASNSISPSDPALI-QARTLMKIPLRPRL 152 (156)
Q Consensus 102 ~~~~~~~~l~Iygp~~~--~l----~~-----------~~~----------~~~~~~~~~~~~~-~~~~V~~~~~~H~~ 152 (156)
....+||+++.+ ++ .. ..+ .++.++.++.+++ ++++|++++..|..
T Consensus 261 -----~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~ 334 (640)
T 2xr1_A 261 -----GYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHIL 334 (640)
T ss_dssp -----TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSST
T ss_pred -----CCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCc
Confidence 124689999876 21 10 011 3567888899999 99999999999943
No 19
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.62 E-value=4.3e-16 Score=136.73 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=85.7
Q ss_pred eEEEEEecCCC-CCCcEEEEEECCeEEEEecCchH-----HHHHHHc-CCCcCCcCeEEEcCCChhhhcChHHHHHHHhh
Q psy16255 32 VNLQVLGSGAR-GAPKSLYLFTDQSRYLFNCGEGT-----QRLAHEH-KMKLAKLDSVFITQPVWENLGGLLGLALTIQD 104 (156)
Q Consensus 32 m~l~~LGtg~~-~~~~s~~I~~~~~~iLiD~G~g~-----~~~l~~~-~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~ 104 (156)
|++++|++|++ ...+|++|+.++..+|||||.+. ...+... ...+ +|++|||||.|+||++||+.|+..+..
T Consensus 1 m~~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~ 79 (717)
T 2i7x_A 1 MTYKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTS 79 (717)
T ss_dssp CCEEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHH
T ss_pred CEEEEEeecCCCCCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhh
Confidence 57999988776 35689999999999999999764 1111111 2333 899999999999999999988754210
Q ss_pred CCCCceEEEcCccc--c----ccc----------c-----e-------e-eEEEcCCCCCeEe----CCEEEEEEEcCCC
Q psy16255 105 VGVPEINLHGPEGL--V----SEN----------M-----G-------L-ASNSISPSDPALI----QARTLMKIPLRPR 151 (156)
Q Consensus 105 ~~~~~l~Iygp~~~--~----l~~----------~-----~-------~-~~~~~~~~~~~~~----~~~~V~~~~~~H~ 151 (156)
.-...++||+++.+ + +.. + . + .++.++.++.+.+ ++++|++++..|+
T Consensus 80 g~~~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs 159 (717)
T 2i7x_A 80 HFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVC 159 (717)
T ss_dssp HHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSS
T ss_pred cccCCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCC
Confidence 00014789998765 1 110 1 0 0 3466788888998 8999999999997
Q ss_pred C
Q psy16255 152 L 152 (156)
Q Consensus 152 ~ 152 (156)
.
T Consensus 160 ~ 160 (717)
T 2i7x_A 160 P 160 (717)
T ss_dssp T
T ss_pred C
Confidence 4
No 20
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.60 E-value=3.9e-15 Score=120.77 Aligned_cols=118 Identities=17% Similarity=0.316 Sum_probs=84.4
Q ss_pred CCCCeeEEEEEecCCCCCCcEEEEEEC-CeEEEEe--cCchHH----------HHHHH---------------cCCC---
Q psy16255 27 YVPGIVNLQVLGSGARGAPKSLYLFTD-QSRYLFN--CGEGTQ----------RLAHE---------------HKMK--- 75 (156)
Q Consensus 27 ~~~~~m~l~~LGtg~~~~~~s~~I~~~-~~~iLiD--~G~g~~----------~~l~~---------------~~~~--- 75 (156)
..+..|++++||+ +|++|+.+ +..+||| ||+|.. .++.+ ..++
T Consensus 33 ~~~~~~~it~lG~------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~ 106 (360)
T 2wyl_A 33 VAPGTFAMWWLGC------TGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFA 106 (360)
T ss_dssp CCTTCEEEEEEET------TEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGG
T ss_pred CCCCcEEEEEecc------cEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHH
Confidence 5677899999987 59999995 8999999 888752 11111 1133
Q ss_pred cCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--ccccce---eeEEEcCCCCCeEeCCEEEEEEEcCC
Q psy16255 76 LAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSENMG---LASNSISPSDPALIQARTLMKIPLRP 150 (156)
Q Consensus 76 ~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~~~~---~~~~~~~~~~~~~~~~~~V~~~~~~H 150 (156)
+.++++|||||.|+||+ |++.+...... ....++||+|.++ +++... .+++++++++.+++++++|+++++.|
T Consensus 107 l~~id~VliTH~H~DHi-g~~~l~~l~~~-~~~~~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H 184 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHI-DVNVAAAVMQN-CADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFD 184 (360)
T ss_dssp CCCCSEEECSBSCTTTC-CHHHHHHHHHH-SCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCC
T ss_pred cCCCCEEEECCCchhcC-CHHHHHHHHhc-CCCCCEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEECCEEEEEEeccC
Confidence 36799999999999999 55444321111 1125889999887 444322 25788899999999999999999999
Q ss_pred CC
Q psy16255 151 RL 152 (156)
Q Consensus 151 ~~ 152 (156)
+.
T Consensus 185 ~~ 186 (360)
T 2wyl_A 185 RT 186 (360)
T ss_dssp C-
T ss_pred cc
Confidence 63
No 21
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.60 E-value=2.3e-15 Score=114.09 Aligned_cols=113 Identities=11% Similarity=0.078 Sum_probs=83.4
Q ss_pred CeeEEEEEecCCC---------CCCcEEEEEECCeEEEEecCch-----HHHHHHHcCCCcCCcCeEEEcCCChhhhcCh
Q psy16255 30 GIVNLQVLGSGAR---------GAPKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKMKLAKLDSVFITQPVWENLGGL 95 (156)
Q Consensus 30 ~~m~l~~LGtg~~---------~~~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL 95 (156)
.-|+|+|+|+++. +..+|++|+.++..+|||||.+ +.+.+.+.++++.+|++||+||.|+||++|+
T Consensus 11 ~~~~~~~~~~~g~~~~p~~~~~~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~ 90 (221)
T 1ztc_A 11 HHMELKILVTGGNVFVPGRLNAHFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNS 90 (221)
T ss_dssp CCEEEEEEECCBEEEETTTEECCBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGG
T ss_pred cceeEEEEEecceEEecCCCCCCceEEEEEEeCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCch
Confidence 4589999999875 3458999999899999999974 4566777888888999999999999999999
Q ss_pred HHHHHHHhhCCCCceEEEcCccc---ccccc--------------eeeEEEcCCCCCeEeCCEEEEEEEcCCCC
Q psy16255 96 LGLALTIQDVGVPEINLHGPEGL---VSENM--------------GLASNSISPSDPALIQARTLMKIPLRPRL 152 (156)
Q Consensus 96 ~~l~~~~~~~~~~~l~Iygp~~~---~l~~~--------------~~~~~~~~~~~~~~~~~~~V~~~~~~H~~ 152 (156)
+.+. ..+||+++.. .++.+ ..++..++++..+..++++|...| -|+.
T Consensus 91 ~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~v~~~p-GHt~ 154 (221)
T 1ztc_A 91 VLFE---------NATFYVHEVYKTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLFDEKVKVFHTP-WHAR 154 (221)
T ss_dssp GGCT---------TCEEEEEGGGGGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEETTTTEEEEECC-SSST
T ss_pred hhCC---------CCEEEEeHHHhhhhhhhhccchhhhhhhccccccceEEeCCCCEEECCeEEEEEcC-CCCc
Confidence 7542 3678888763 11111 124566777766643377777766 6654
No 22
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.58 E-value=1.7e-14 Score=112.76 Aligned_cols=110 Identities=14% Similarity=0.136 Sum_probs=83.6
Q ss_pred EEEEecCCCCCCcEEEEEECCeEEEEecCch-----HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCC
Q psy16255 34 LQVLGSGARGAPKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVP 108 (156)
Q Consensus 34 l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~ 108 (156)
+.++|.+ ..+|++|+.++..+|||+|.+ +...+.+.++++.+|++||+||.|+||++|+..+....
T Consensus 47 v~~~~~~---~~n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~------ 117 (294)
T 3m8t_A 47 IYYVGTD---GIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET------ 117 (294)
T ss_dssp EEECCCS---SSCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH------
T ss_pred EEEeCCC---CeEEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc------
Confidence 5566543 357999999999999999974 45567778888889999999999999999998886532
Q ss_pred ceEEEcCccc--ccccc-----------ee----eEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 109 EINLHGPEGL--VSENM-----------GL----ASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 109 ~l~Iygp~~~--~l~~~-----------~~----~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
.++||+++.. +++.. .+ ..+.++.++.+.+++++|+.+++. |+.
T Consensus 118 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~ 179 (294)
T 3m8t_A 118 GAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSP 179 (294)
T ss_dssp CCEEEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSST
T ss_pred CCEEEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCc
Confidence 4689998876 22210 01 124567888999999999999877 653
No 23
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.55 E-value=1.6e-14 Score=111.98 Aligned_cols=103 Identities=8% Similarity=0.038 Sum_probs=79.1
Q ss_pred CCcEEEEEECCeEEEEecCch-----HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 44 APKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 44 ~~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
..+|++|+.++..+|||||.+ +...+.+.++++.+|++||+||.|+||++|+..|...+ .++||+++..
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~------~~~v~~~~~~ 110 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT------GAKVAANAES 110 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS------SCEEEECHHH
T ss_pred CcEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc------CCeEEECHHH
Confidence 457999999889999999976 34567778888889999999999999999998876532 4789998876
Q ss_pred --cccc-------c-------ee-eEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 119 --VSEN-------M-------GL-ASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 119 --~l~~-------~-------~~-~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
+++. + .. ..+.++.++.+.+++++|+.+++. |+.
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~ 162 (269)
T 1sml_A 111 AVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTP 162 (269)
T ss_dssp HHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSST
T ss_pred HHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEECCEEEEEEECCCCCc
Confidence 2211 0 01 124567788899999999999987 653
No 24
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.55 E-value=2.4e-14 Score=110.65 Aligned_cols=110 Identities=10% Similarity=0.078 Sum_probs=81.7
Q ss_pred EEEEecCCCCCCcEEEEEECCeEEEEecCch-----HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCC
Q psy16255 34 LQVLGSGARGAPKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVP 108 (156)
Q Consensus 34 l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~ 108 (156)
+..+|.+ ..+|++|..++..+|||+|.+ +...+.+.++++.+|++||+||.|+||++|+..+....
T Consensus 17 v~~i~~~---~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~------ 87 (263)
T 1k07_A 17 LYYVGTD---DLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT------ 87 (263)
T ss_dssp EEECCBS---SBCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH------
T ss_pred EEEECCC---CeEEEEEEeCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc------
Confidence 4455443 457999999889999999986 34567778888889999999999999999998776432
Q ss_pred ceEEEcCccc--cccc---------------c-e-eeEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 109 EINLHGPEGL--VSEN---------------M-G-LASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 109 ~l~Iygp~~~--~l~~---------------~-~-~~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
.++||+++.. +++. + . .....+++++.+.+++++|+.+++. |+.
T Consensus 88 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~ 151 (263)
T 1k07_A 88 KAKYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTR 151 (263)
T ss_dssp CCEEEEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSST
T ss_pred CCEEEEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCC
Confidence 3689988766 2211 1 0 0224567788899999999998876 653
No 25
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.52 E-value=4e-14 Score=110.79 Aligned_cols=102 Identities=7% Similarity=0.060 Sum_probs=79.3
Q ss_pred CCcEEEEEECCeEEEEecCch-----HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 44 APKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 44 ~~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
..+|++|+.++..+|||+|.+ +...+.+.++++.+|++||+||.|+||++|+..+.... .++||+++..
T Consensus 57 ~~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~ 130 (303)
T 4ax1_B 57 GISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT------GAPVYARAPA 130 (303)
T ss_dssp SSCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH------CCCEEEEHHH
T ss_pred CceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc------CCEEEEcHHH
Confidence 357999998899999999963 45567778888888999999999999999998886542 3678888776
Q ss_pred --ccccc-----------------eeeEEEcCCCCCeEeCCEEEEEEEcC-CC
Q psy16255 119 --VSENM-----------------GLASNSISPSDPALIQARTLMKIPLR-PR 151 (156)
Q Consensus 119 --~l~~~-----------------~~~~~~~~~~~~~~~~~~~V~~~~~~-H~ 151 (156)
+++.. ....+.++.++.+++++++|+.+.+. |+
T Consensus 131 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt 183 (303)
T 4ax1_B 131 IDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHT 183 (303)
T ss_dssp HHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSS
T ss_pred HHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCC
Confidence 22110 12356678899999999999998876 54
No 26
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.49 E-value=2e-14 Score=111.74 Aligned_cols=111 Identities=8% Similarity=0.040 Sum_probs=77.3
Q ss_pred CCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCchHH----------H-H----HHHcCCCcC----CcCeEEEcCCCh
Q psy16255 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ----------R-L----AHEHKMKLA----KLDSVFITQPVW 89 (156)
Q Consensus 29 ~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~----------~-~----l~~~~~~~~----~i~~IfiTH~H~ 89 (156)
+.||+|+++|. +|++|+.++.++|||++-.-. + . +....++++ ++++|||||.|.
T Consensus 2 ~~~m~it~lGh------a~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~ 75 (264)
T 3rpc_A 2 NAMTQYTHIRN------ATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHL 75 (264)
T ss_dssp -CCCEEEEEET------TEEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCG
T ss_pred CceEEEEEEeC------cEEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCch
Confidence 35799999996 689999999999999942210 0 0 001112322 789999999999
Q ss_pred hhhcChHHHHHHHhhCCCCceEEEcC-ccc--cccccee-eEEEcCCCCCeEeCCEEEEEEEcCCCCC
Q psy16255 90 ENLGGLLGLALTIQDVGVPEINLHGP-EGL--VSENMGL-ASNSISPSDPALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 90 DHi~GL~~l~~~~~~~~~~~l~Iygp-~~~--~l~~~~~-~~~~~~~~~~~~~~~~~V~~~~~~H~~p 153 (156)
||++++..+.. +..++||++ .++ +++...+ +.+.+ ++.+++++++|+++|+.|..+
T Consensus 76 DH~~~~~~~~~------~~~~~v~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~i~~~pa~H~~~ 135 (264)
T 3rpc_A 76 DHWDDTAINSI------PKSLPIFVQNTADKELITSQGFIDVRII--FESLEFNGITLRKTGGSHGTV 135 (264)
T ss_dssp GGSCHHHHHHS------CTTSCEEESSHHHHHHHHHTTCSCEEEC--SSEEEETTEEEEEECCCSSCH
T ss_pred hhCCCHHHHhh------ccCCeEEEeCHHHHHHHHhcCCCeeEEe--cccEEECCEEEEEeccccCCc
Confidence 99999865432 235789998 665 4432222 23444 468999999999999999863
No 27
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.48 E-value=7e-14 Score=107.46 Aligned_cols=112 Identities=12% Similarity=0.105 Sum_probs=80.7
Q ss_pred eEEEEEecCCC---CCCcEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCC
Q psy16255 32 VNLQVLGSGAR---GAPKSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVP 108 (156)
Q Consensus 32 m~l~~LGtg~~---~~~~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~ 108 (156)
..+.++..+.. +..+|++|..++..+|||+|.+.... +.++ ..+|++||+||.|+||++|++.+...+
T Consensus 4 ~~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~~~--~l~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~------ 74 (261)
T 3adr_A 4 RGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIA--DFSF-LDKLDYIVLTHLHIDHIGLLPELLQVY------ 74 (261)
T ss_dssp CEEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTCCC--CCTT-CSCCCEEECSCCSGGGTTTHHHHHHHS------
T ss_pred CCeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCChh--hcCC-CCCCcEEEECCCCccccCCHHHHHHHh------
Confidence 45777777622 34679999766789999999875311 1255 678999999999999999998876542
Q ss_pred ceEEEcCccc--cccc--------------------------ce---eeEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 109 EINLHGPEGL--VSEN--------------------------MG---LASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 109 ~l~Iygp~~~--~l~~--------------------------~~---~~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
.++||+++.. .+.. .. .++..+++++.+.+++++|+++++. |+.
T Consensus 75 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~ 150 (261)
T 3adr_A 75 KAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHAR 150 (261)
T ss_dssp CCEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCT
T ss_pred CCeEEECHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCC
Confidence 3678887754 1110 01 1345678888899999999999988 654
No 28
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.48 E-value=8.1e-14 Score=113.51 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=77.7
Q ss_pred CCcEEEEEECCeEEEEecCch--H---HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 44 APKSLYLFTDQSRYLFNCGEG--T---QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 44 ~~~s~~I~~~~~~iLiD~G~g--~---~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
..+|++|+ ++..+|||||.+ . ...+.+. ++..+|++||+||.|+||++|++.+...+ +.++||+++..
T Consensus 34 ~~n~~li~-~~~~iliD~G~~~~~~~~~~~l~~~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~ 106 (402)
T 1e5d_A 34 TYNAYLVE-DEKTTLFDTVKAEYKGELLCGIASV-IDPKKIDYLVIQHLELDHAGALPALIEAC-----QPEKIFTSSLG 106 (402)
T ss_dssp EEEEEEEC-SSSCEEECCCCGGGHHHHHHHHHTT-SCGGGCCEEEECCCSHHHHTTHHHHHHHH-----CCSEEEEEHHH
T ss_pred ceEEEEEE-CCCEEEEeCCCCccHHHHHHHHHHh-CCcccCCEEEeCCCCccccccHHHHHHHC-----CCCEEEEChHH
Confidence 45799998 568999999987 2 2334444 56789999999999999999999886543 24789998877
Q ss_pred --ccccc----eeeEEEcCCCCCeEeCCEEEEEEEcC--CCC
Q psy16255 119 --VSENM----GLASNSISPSDPALIQARTLMKIPLR--PRL 152 (156)
Q Consensus 119 --~l~~~----~~~~~~~~~~~~~~~~~~~V~~~~~~--H~~ 152 (156)
+++.+ ....+.+++++.+.+++++|+.+++. |+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~ 148 (402)
T 1e5d_A 107 QKAMESHFHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWP 148 (402)
T ss_dssp HHHHHHHHCCSSCCEEEECTTCEEECSSCEEEEEECTTSSST
T ss_pred HHHHHHHhCCCCCceEEcCCCCEEEECCCEEEEEeCCCCCCC
Confidence 33221 13466788899999999999999987 853
No 29
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.47 E-value=3.9e-13 Score=104.56 Aligned_cols=109 Identities=17% Similarity=0.275 Sum_probs=80.6
Q ss_pred eeEEEEEecCCCCCCcEEEEEE-CCeEEEEecCch--HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCC
Q psy16255 31 IVNLQVLGSGARGAPKSLYLFT-DQSRYLFNCGEG--TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGV 107 (156)
Q Consensus 31 ~m~l~~LGtg~~~~~~s~~I~~-~~~~iLiD~G~g--~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~ 107 (156)
.|+++.+..++ ..+||+|.. ++..+|||+|.+ ....+.+.++ +|++|++||.|+||++|+..+...+
T Consensus 7 ~m~i~~i~~~~--~n~~yli~~~~~~~vlID~G~~~~i~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~----- 76 (258)
T 2qed_A 7 SMNLNSIPAFQ--DNYIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKW---MPEAIFLTHHHHDHVGGVKELLQHF----- 76 (258)
T ss_dssp CCEEEEEEETT--TEEEEEEECTTSEEEEECCSCHHHHHHHHHHHTC---EEEEEECCSCCHHHHTTHHHHHHHC-----
T ss_pred ccEEEEecccC--ceEEEEEEECCCcEEEEeCCCcHHHHHHHHHcCC---CCCEEEeCCCCccccCCHHHHHHHC-----
Confidence 36888888654 335898887 568999999976 4456666665 6899999999999999998876542
Q ss_pred CceEEEcCcccccccceeeEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 108 PEINLHGPEGLVSENMGLASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 108 ~~l~Iygp~~~~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
...+||+++...+.. ..+.++.|+.+.+++.+++.+.+. |+.
T Consensus 77 ~~~~v~~~~~~~~~~---~~~~~~~g~~~~~g~~~~~vi~tPGHt~ 119 (258)
T 2qed_A 77 PQMTVYGPAETQDKG---ATHLVGDGDTIRVLGEKFTLFATPGHTL 119 (258)
T ss_dssp TTCEEEECGGGGGGT---CSEECCTTCEEEETTEEEEEEECCSSST
T ss_pred CCCEEEecccccCCC---CcEEeCCCCEEEECCcEEEEEECCCCCC
Confidence 137899987652111 224567888899999999998875 553
No 30
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.47 E-value=4.2e-13 Score=105.10 Aligned_cols=111 Identities=15% Similarity=0.171 Sum_probs=78.9
Q ss_pred EEEEecCCC----CCCcEEEEEECCeEEEEecCchH--------HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHH
Q psy16255 34 LQVLGSGAR----GAPKSLYLFTDQSRYLFNCGEGT--------QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALT 101 (156)
Q Consensus 34 l~~LGtg~~----~~~~s~~I~~~~~~iLiD~G~g~--------~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~ 101 (156)
..++|.... ...+||+|+.++..+|||||.+. ...+.+.+. +|++||+||.|+||++|++.|...
T Consensus 17 ~~v~g~~p~p~~~~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~ 93 (289)
T 4ad9_A 17 VRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNT---AIQEIVVTHWHRDHSGGIGDICKS 93 (289)
T ss_dssp EEEECSCCBTTTBTCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTC---CEEEEECSCSSHHHHTTHHHHHHH
T ss_pred EEEeCCCCCCCcCCceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCC---CceEEEEcCCCCcccccHHHHHHh
Confidence 455554322 34689999888889999999642 223444444 689999999999999999988765
Q ss_pred HhhCCCCceEEEcCccc-----ccccceeeEEEcCCCCCeEeCCEEEEEEEcC
Q psy16255 102 IQDVGVPEINLHGPEGL-----VSENMGLASNSISPSDPALIQARTLMKIPLR 149 (156)
Q Consensus 102 ~~~~~~~~l~Iygp~~~-----~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~~ 149 (156)
+.. ...+.+|+++.. +.......+..++.|+.+.+++++++.+.+.
T Consensus 94 ~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gg~~~~~~~~p 144 (289)
T 4ad9_A 94 INN--DTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTP 144 (289)
T ss_dssp SCC--SSCCCEEECCCSSCCCCCBTTTTBCEEECCTTCEEEETTEEEEEEECC
T ss_pred hcc--CCCceEEecCCCcchhhhccCCCCceEEcCCCCEEEeCCeEEEEEECC
Confidence 321 235678887654 2222334567889999999999999998884
No 31
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.45 E-value=2.6e-13 Score=106.79 Aligned_cols=85 Identities=21% Similarity=0.342 Sum_probs=67.1
Q ss_pred CCeeEEEEEecCCC-------CCCcEEEEEECCeEEEEecCchHH--HHHHHcCCCcCCcCeEEEcCCChhhhcChHHHH
Q psy16255 29 PGIVNLQVLGSGAR-------GAPKSLYLFTDQSRYLFNCGEGTQ--RLAHEHKMKLAKLDSVFITQPVWENLGGLLGLA 99 (156)
Q Consensus 29 ~~~m~l~~LGtg~~-------~~~~s~~I~~~~~~iLiD~G~g~~--~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~ 99 (156)
-..++|++|--... ..++|++|+.++..+|||||.+.. ..+.+.++++.+|++||+||.|+||++|++.+.
T Consensus 10 ~~~~~it~l~dn~~~~~~~~~~~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~ 89 (284)
T 2p4z_A 10 HGSVEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLL 89 (284)
T ss_dssp CCCCEEEEEECSBCCSTTCCBCSSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHH
T ss_pred CCCEEEEEEEeCCCCCcCcccCCEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHH
Confidence 34567888732211 456899999999999999999754 567778899999999999999999999999775
Q ss_pred HHHhhCCCCceEEEcCccc
Q psy16255 100 LTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 100 ~~~~~~~~~~l~Iygp~~~ 118 (156)
..+ +.++||+++..
T Consensus 90 ~~~-----~~~~v~~~~~~ 103 (284)
T 2p4z_A 90 ERN-----PEVKIYTHKEI 103 (284)
T ss_dssp HHC-----TTCEEEEEGGG
T ss_pred HHc-----CCCceecCHHH
Confidence 422 35789998876
No 32
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.45 E-value=1.6e-13 Score=102.53 Aligned_cols=109 Identities=15% Similarity=0.202 Sum_probs=76.5
Q ss_pred eEEEEEecCCCCCCcEEEEEE--CCeEEEEecCchHH---HHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCC
Q psy16255 32 VNLQVLGSGARGAPKSLYLFT--DQSRYLFNCGEGTQ---RLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG 106 (156)
Q Consensus 32 m~l~~LGtg~~~~~~s~~I~~--~~~~iLiD~G~g~~---~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~ 106 (156)
|+++++-.+. ...+|++|+. ++..+|||+|.+.. ..+.+.++ ++++||+||.|+||++|+..+...+
T Consensus 1 m~i~~~~~~~-~~~n~~li~~~~~~~~iLiD~G~~~~~l~~~l~~~g~---~i~~ii~TH~H~DH~gg~~~l~~~~---- 72 (210)
T 2xf4_A 1 MNYRIIPVTA-FSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGV---TLMQILLTHGHLDHVGAASELAQHY---- 72 (210)
T ss_dssp CEEEEEEETT-TTEEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTC---EEEEEECSCSCHHHHTTHHHHHHHH----
T ss_pred CeEEEEeeCC-cccEEEEEEecCCCcEEEEcCCCCHHHHHHHHHHcCC---ceeEEEECCCChhhhcCHHHHHHHc----
Confidence 4566666543 3467999984 57899999997643 34445554 4899999999999999998876543
Q ss_pred CCceEEEcCccc--cc-cc-------ce-------eeEEEcCCCCCeEeCCEEEEEEEcCC
Q psy16255 107 VPEINLHGPEGL--VS-EN-------MG-------LASNSISPSDPALIQARTLMKIPLRP 150 (156)
Q Consensus 107 ~~~l~Iygp~~~--~l-~~-------~~-------~~~~~~~~~~~~~~~~~~V~~~~~~H 150 (156)
+++||+++.. .+ +. +. .....+++++.+.+++++|+.+++.+
T Consensus 73 --~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pg 131 (210)
T 2xf4_A 73 --GVPVIGPEKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPG 131 (210)
T ss_dssp --TCCEECCCGGGHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECCS
T ss_pred --CCcEEEecchHHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEECCeEEEEEECCC
Confidence 3679988765 21 11 11 11234677888999999999998863
No 33
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.44 E-value=2.9e-13 Score=110.11 Aligned_cols=101 Identities=9% Similarity=0.059 Sum_probs=77.6
Q ss_pred CcEEEEEECCeEEEEecCch-----HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc-
Q psy16255 45 PKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL- 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~- 118 (156)
.+|++|.. +..+|||+|.+ +...+.+. ++..+|++||+||.|.||++|+..+...+ +.++||+++..
T Consensus 36 ~n~~li~~-~~~iliD~g~~~~~~~~~~~l~~~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~ 108 (398)
T 1ycg_A 36 YNAYLIVD-DKTALVDTVYEPFKEELIAKLKQI-KDPVKLDYLVVNHTESDHAGAFPAIMELC-----PDAHVLCTQRAF 108 (398)
T ss_dssp ECCEEECS-SSCEEECCCCGGGHHHHHHHHHHH-CSSCCCSEEEESCCSHHHHTTHHHHHHHC-----TTCEEEECHHHH
T ss_pred EEEEEEEC-CCEEEEeCCCcccHHHHHHHHHHh-cCcccCCEEEeCCCCcchhhhHHHHHHHC-----CCCEEEEcHHHH
Confidence 47899984 56899999987 33445555 66789999999999999999998876542 24789999877
Q ss_pred -cccc---c-eeeEEEcCCCCCeEeCCEEEEEEEcC--CCC
Q psy16255 119 -VSEN---M-GLASNSISPSDPALIQARTLMKIPLR--PRL 152 (156)
Q Consensus 119 -~l~~---~-~~~~~~~~~~~~~~~~~~~V~~~~~~--H~~ 152 (156)
.++. . ....+.+++++.+.+++.+++.+++. |+.
T Consensus 109 ~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~ 149 (398)
T 1ycg_A 109 DSLKAHYSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWP 149 (398)
T ss_dssp HHHHHHTCSCCCEEEECCTTCEEECSSCEEEEEECTTSSST
T ss_pred HHHHHHhCCCCcceEEeCCCCEEeeCCcEEEEEeCCCCCCC
Confidence 3322 1 23567788899999999999999887 653
No 34
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.44 E-value=1.1e-12 Score=111.49 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=81.3
Q ss_pred CCeeEEEEEecCCCCCCcEEEEEECCeEEEEecCch----------------------------HHHHHHHcCCCcCCcC
Q psy16255 29 PGIVNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEG----------------------------TQRLAHEHKMKLAKLD 80 (156)
Q Consensus 29 ~~~m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g----------------------------~~~~l~~~~~~~~~i~ 80 (156)
...++|++|.+|. +.++|++|+.++..+|||||.+ +...|.+.++ .+|+
T Consensus 3 ~~~~~I~~ldvG~-gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi--~~id 79 (547)
T 2bib_A 3 SSGNKIHFINVQE-GGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSV--QKLD 79 (547)
T ss_dssp CSCEEEEEECBSS-SBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTC--CCBS
T ss_pred CcCceEEEEEcCC-CCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCc--cccc
Confidence 4678999999974 2347999999899999999975 2345555554 6799
Q ss_pred eEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--ccc--------------------cceeeEE--EcCCCCCe
Q psy16255 81 SVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSE--------------------NMGLASN--SISPSDPA 136 (156)
Q Consensus 81 ~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~--------------------~~~~~~~--~~~~~~~~ 136 (156)
+|||||.|.||++|++.|+..+ +...||+++.. .+. ...+.+. .+.++..+
T Consensus 80 ~vilTH~H~DHiggl~~l~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~ 154 (547)
T 2bib_A 80 FILVTHTHSDHIGNVDELLSTY-----PVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHF 154 (547)
T ss_dssp CEECCCSCHHHHTTHHHHHHHS-----CBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEE
T ss_pred EEEEcCCCccccCCHHHHHHhC-----CccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceE
Confidence 9999999999999999887643 12368887654 211 0112232 24667789
Q ss_pred EeCCEEEEEEEc
Q psy16255 137 LIQARTLMKIPL 148 (156)
Q Consensus 137 ~~~~~~V~~~~~ 148 (156)
++++++|++++.
T Consensus 155 ~~g~~~i~~l~~ 166 (547)
T 2bib_A 155 QFGDMDIQLYNY 166 (547)
T ss_dssp EETTEEEEEESC
T ss_pred ecCCeeEEEecC
Confidence 999999999874
No 35
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.44 E-value=7.5e-14 Score=108.25 Aligned_cols=97 Identities=7% Similarity=0.067 Sum_probs=73.8
Q ss_pred cEEEEEECCeEEEEecCchHH---------------------------HHHHHcCCCcCCcCeEEEcCCChhhhcChHHH
Q psy16255 46 KSLYLFTDQSRYLFNCGEGTQ---------------------------RLAHEHKMKLAKLDSVFITQPVWENLGGLLGL 98 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g~~---------------------------~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l 98 (156)
+|++|+.++..+|||||.+.. .++.+.++++.+|++||+||.|+||++|+..|
T Consensus 44 ~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~ 123 (276)
T 2r2d_A 44 SAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYF 123 (276)
T ss_dssp EEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGGC
T ss_pred EEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhhC
Confidence 699999888899999997643 46788899999999999999999999999754
Q ss_pred HHHHhhCCCCceEEEcCccc--ccc----------cc-----------eeeEEEcCC-CCCeEeC-CEEEEEE-EcCCCC
Q psy16255 99 ALTIQDVGVPEINLHGPEGL--VSE----------NM-----------GLASNSISP-SDPALIQ-ARTLMKI-PLRPRL 152 (156)
Q Consensus 99 ~~~~~~~~~~~l~Iygp~~~--~l~----------~~-----------~~~~~~~~~-~~~~~~~-~~~V~~~-~~~H~~ 152 (156)
...+||+++.. .+. .+ ..++..+++ +..++++ +++|.++ | .|+.
T Consensus 124 ---------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt~ 193 (276)
T 2r2d_A 124 ---------GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHAS 193 (276)
T ss_dssp ---------SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSSS
T ss_pred ---------CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCCc
Confidence 24688888765 111 00 234566663 6677775 7999988 7 8863
No 36
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.43 E-value=1e-12 Score=101.41 Aligned_cols=109 Identities=17% Similarity=0.041 Sum_probs=79.3
Q ss_pred CeeEEEEEecCCCCCCcEEEEEEC----CeEEEEecCchH----HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHH
Q psy16255 30 GIVNLQVLGSGARGAPKSLYLFTD----QSRYLFNCGEGT----QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALT 101 (156)
Q Consensus 30 ~~m~l~~LGtg~~~~~~s~~I~~~----~~~iLiD~G~g~----~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~ 101 (156)
|.|.+..+..+. ...+||+|..+ +..+|||+|.+. ...+.+.++ +|++||+||.|+||++|+..|...
T Consensus 1 ~~m~~~~~~~~~-~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~ 76 (245)
T 2gcu_A 1 MKLLFRQLFENE-SSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGL---KLIYAMNTHVHADHVTGTGLLKTK 76 (245)
T ss_dssp CCEEEEEEEETT-TTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTC---EEEEEECSSCCSSSCBSHHHHHHH
T ss_pred CCcEEEEeecCC-CceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCC---eeeEEEeCCCChhhhhhHHHHHHh
Confidence 457787777655 34579999874 589999999863 234455565 489999999999999999877643
Q ss_pred HhhCCCCceEEEcCcccccccceeeEEEcCCCCCeEeCCEEEEEEEcC-CC
Q psy16255 102 IQDVGVPEINLHGPEGLVSENMGLASNSISPSDPALIQARTLMKIPLR-PR 151 (156)
Q Consensus 102 ~~~~~~~~l~Iygp~~~~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-H~ 151 (156)
+ ...+||+++.... .....++.|+.+++++++|+.+.+. |+
T Consensus 77 ~-----~~~~v~~~~~~~~----~~~~~~~~g~~~~~g~~~i~v~~tpGHt 118 (245)
T 2gcu_A 77 L-----PGVKSVISKASGS----KADLFLEPGDKVSIGDIYLEVRATPGHT 118 (245)
T ss_dssp S-----TTCEEEEEGGGCC----CCSEEECTTCEEEETTEEEEEEECCSSS
T ss_pred C-----CCCeEEecccccc----cCCEEcCCCCEEEECCEEEEEEECCCCC
Confidence 2 2478998876621 1123567788899999999998875 54
No 37
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.43 E-value=7.5e-13 Score=104.52 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=81.2
Q ss_pred CCeeEEEEEecCCCCCCcEEEEEE--CCeEEEEecCch---------------HHHHHHHcCCCcCCcCeEEEcCCChhh
Q psy16255 29 PGIVNLQVLGSGARGAPKSLYLFT--DQSRYLFNCGEG---------------TQRLAHEHKMKLAKLDSVFITQPVWEN 91 (156)
Q Consensus 29 ~~~m~l~~LGtg~~~~~~s~~I~~--~~~~iLiD~G~g---------------~~~~l~~~~~~~~~i~~IfiTH~H~DH 91 (156)
|++|+++.+-.++. .++||+|.. +++.+|||+|.+ ....+.+.++ +|++||+||.|+||
T Consensus 2 pg~m~i~~~~~~~~-~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~---~i~~Il~TH~H~DH 77 (298)
T 4efz_A 2 PGSMTVEGFFDPAT-CTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGA---RVRWLLETHVHADH 77 (298)
T ss_dssp BCSCEEEEEECTTT-CBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTC---EEEEEECSSCCSSS
T ss_pred CCceEEEEEecCCc-ccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCC---cceEEEECCCchhh
Confidence 56788888877653 457999976 457999999963 3345556665 48999999999999
Q ss_pred hcChHHHHHHHhhCCCCceEEEcCccc--ccc----c------c-----eeeEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 92 LGGLLGLALTIQDVGVPEINLHGPEGL--VSE----N------M-----GLASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 92 i~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~----~------~-----~~~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
++|+..|...+ ..+||.++.. +.+ . + .+ .+.++.++.+.+++++|+.+.+. |+.
T Consensus 78 ~gg~~~l~~~~------~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~l~~g~~~i~vi~tPGHT~ 149 (298)
T 4efz_A 78 LSAAPYLKTRV------GGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQF-DRLLDDGDTLALGALSIRAMHTPGHTP 149 (298)
T ss_dssp BCCHHHHHHHH------CCEEEEETTHHHHHHHHHHHTTCCTTSCSSSTTS-SEEECTTCEEEETTEEEEEEECCSSST
T ss_pred hhhHHHHHHHh------CCcEEEChhHHHHHHHHHHhcCCcccccccccCC-CEEeCCCCEEEECCEEEEEEECCCCCc
Confidence 99998886543 2567776654 111 0 0 11 14568889999999999999987 543
No 38
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.43 E-value=8.1e-14 Score=108.07 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=63.4
Q ss_pred eeEEEEEecCCCC------------------CCcEEEEEECCeEEEEecCchH--------------------HHHHHHc
Q psy16255 31 IVNLQVLGSGARG------------------APKSLYLFTDQSRYLFNCGEGT--------------------QRLAHEH 72 (156)
Q Consensus 31 ~m~l~~LGtg~~~------------------~~~s~~I~~~~~~iLiD~G~g~--------------------~~~l~~~ 72 (156)
.|+|++|++|... ..+|++|+.++..+|||||.+. ...+.+.
T Consensus 3 ~~~i~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 82 (274)
T 3aj3_A 3 DTKVYLLDGGSLVLDGYHVFWNRGPGGEVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLL 82 (274)
T ss_dssp CCEEEEEEEEEEEEEHHHHTTTTCCCSEEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHT
T ss_pred ccEEEEEcCceEEechHheecCCCCCcEEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHc
Confidence 4789999998751 1378999998899999999875 3567778
Q ss_pred CCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 73 KMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 73 ~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
++++.+|++||+||.|+||++|+..| ...+||+++..
T Consensus 83 g~~~~~i~~VilTH~H~DH~gg~~~~---------~~a~v~~~~~~ 119 (274)
T 3aj3_A 83 GLEPRDIDVVVNSHFHFDHCGGNKYF---------PHAKKICHRSE 119 (274)
T ss_dssp TCCGGGCCEEECSCCSGGGTTTGGGC---------TTSEEEEETTH
T ss_pred CCCHHHCCEEEecCcCcccCCchhhC---------CCCEEEECHHH
Confidence 89899999999999999999999754 13567776654
No 39
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.43 E-value=3e-12 Score=99.33 Aligned_cols=106 Identities=9% Similarity=0.072 Sum_probs=76.5
Q ss_pred eEEEEEecCCCCCCcEEEEEEC--CeEEEEecCch--HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCC
Q psy16255 32 VNLQVLGSGARGAPKSLYLFTD--QSRYLFNCGEG--TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGV 107 (156)
Q Consensus 32 m~l~~LGtg~~~~~~s~~I~~~--~~~iLiD~G~g--~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~ 107 (156)
|+|..+-+.+ ..+||+|..+ +..+|||+|.+ ....+.+.+. +|++||+||.|+||++|+..|...+
T Consensus 1 m~i~~~~~~~--~n~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~----- 70 (254)
T 1xm8_A 1 MQIELVPCLK--DNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGR---NLTYILNTHHHYDHTGGNLELKDRY----- 70 (254)
T ss_dssp CEEEEEEETT--TEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTC---CCCEEECSSCCHHHHTTHHHHHHHH-----
T ss_pred CEEEEecccC--CeEEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCC---CccEEEECCCCCcccccHHHHHHHc-----
Confidence 4555555522 2359999864 46899999975 3445666664 5899999999999999998876543
Q ss_pred CceEEEcCccc--ccccceeeEEEcCCCCCeEeCCEEEEEEEcC-CC
Q psy16255 108 PEINLHGPEGL--VSENMGLASNSISPSDPALIQARTLMKIPLR-PR 151 (156)
Q Consensus 108 ~~l~Iygp~~~--~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-H~ 151 (156)
+.+||+++.. .+.. ....++.|+.+.+++++++.+.+. |+
T Consensus 71 -~~~v~~~~~~~~~~~~---~~~~~~~g~~~~lg~~~~~vi~tPGHt 113 (254)
T 1xm8_A 71 -GAKVIGSAMDKDRIPG---IDMALKDGDKWMFAGHEVHVMDTPGHT 113 (254)
T ss_dssp -CCEEEEEGGGGGGSTT---EEEEECTTCEEEETTEEEEEEECCSSS
T ss_pred -CCeEEEchhhhhcCCC---CceeeCCCCEEEECCEEEEEEECCCCC
Confidence 3679998766 3332 234567888999999998888764 54
No 40
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.41 E-value=4.1e-13 Score=109.39 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=77.5
Q ss_pred CcEEEEEECCeEEEEecCch-----HHHHHHHcCC---CcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEG-----TQRLAHEHKM---KLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPE 116 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g-----~~~~l~~~~~---~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~ 116 (156)
.+|++|..++..+|||+|.+ ....+.+. + +..+|++||+||.|+||++|+..+...+ +.++||+++
T Consensus 35 ~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~-~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----p~~~v~~~~ 108 (404)
T 2ohh_A 35 YNAYLVCGDEGVALIDNSYPGTFDELMARVEDA-LQQVGMERVDYIIQNHVEKDHSGVLVELHRRF-----PEAPIYCTE 108 (404)
T ss_dssp ECCEEEECSSCEEEECCCCTTCHHHHHHHHHHH-HHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS-----TTCCEEECH
T ss_pred EEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHH-hccCCccCCCEEEeCCCCCcccchHHHHHHHC-----CCCEEEECH
Confidence 47999998778999999987 23344444 3 4578999999999999999998876542 246899998
Q ss_pred cc--cccc---c--eeeEEEcCCCCCeEeCCEEEEEEEcC--CCC
Q psy16255 117 GL--VSEN---M--GLASNSISPSDPALIQARTLMKIPLR--PRL 152 (156)
Q Consensus 117 ~~--~l~~---~--~~~~~~~~~~~~~~~~~~~V~~~~~~--H~~ 152 (156)
.. .++. . ....+.++.++.+.+++.+++.+++. |+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~ 153 (404)
T 2ohh_A 109 VAVKGLLKHYPSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWP 153 (404)
T ss_dssp HHHHHHHHHCGGGGGSCEEECCTTCEEECSSCEEEEEECTTSSST
T ss_pred HHHHHHHHHhcccccCCceEcCCCCEEEECCEEEEEEeCCCCCCC
Confidence 76 3221 1 23567788899999999999999997 854
No 41
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.41 E-value=2.3e-12 Score=101.75 Aligned_cols=102 Identities=9% Similarity=-0.030 Sum_probs=76.2
Q ss_pred CCCcEEEEEECCeEEEEecCchH-------HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcC
Q psy16255 43 GAPKSLYLFTDQSRYLFNCGEGT-------QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGP 115 (156)
Q Consensus 43 ~~~~s~~I~~~~~~iLiD~G~g~-------~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp 115 (156)
+..+|++|..++..+|||+|.+. ...+.+.++++.+|++||+||.|.||++|+..+... ..+||++
T Consensus 20 ~~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~-------~~~v~~~ 92 (317)
T 2zo4_A 20 KTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL-------GARVFLH 92 (317)
T ss_dssp CEEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT-------TCEEEEE
T ss_pred CcEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC-------CCEEEEc
Confidence 34689999988899999999764 234566788888899999999999999999877531 4688888
Q ss_pred ccc--cccc--------------------ce---------------------eeEEEcCCCCCeEeCCEEEEEEEcC-CC
Q psy16255 116 EGL--VSEN--------------------MG---------------------LASNSISPSDPALIQARTLMKIPLR-PR 151 (156)
Q Consensus 116 ~~~--~l~~--------------------~~---------------------~~~~~~~~~~~~~~~~~~V~~~~~~-H~ 151 (156)
+.. +++. ++ .....+++++.+.+++.+++.+.+. |+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt 172 (317)
T 2zo4_A 93 EEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHA 172 (317)
T ss_dssp GGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSS
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCCCC
Confidence 765 2110 00 1234567788899999999998885 54
No 42
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.40 E-value=5.9e-13 Score=99.90 Aligned_cols=101 Identities=19% Similarity=0.143 Sum_probs=72.9
Q ss_pred CcEEEEEECCeEEEEecCchH---HHHHHHcCC-CcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGT---QRLAHEHKM-KLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL-- 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~---~~~l~~~~~-~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~-- 118 (156)
.+|++|+.++..+|||||.+. ...+...+. ...+|++||+||.|+||++|++.+.. ..++||+++..
T Consensus 31 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-------~~~~v~~~~~~~~ 103 (219)
T 3l6n_A 31 ANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN-------KGIKTYATAKTNE 103 (219)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH-------TTCEEEECHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh-------CCCEEEEcHHHHH
Confidence 579999999999999999642 222222111 12579999999999999999987752 14789999877
Q ss_pred cccc--ceeeEEEcCCCCCeEeCCEEEEEEEc--CCCC
Q psy16255 119 VSEN--MGLASNSISPSDPALIQARTLMKIPL--RPRL 152 (156)
Q Consensus 119 ~l~~--~~~~~~~~~~~~~~~~~~~~V~~~~~--~H~~ 152 (156)
+++. .......++.+..+.+++++|+.+.+ .|+.
T Consensus 104 ~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~ 141 (219)
T 3l6n_A 104 FLKKDGKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTA 141 (219)
T ss_dssp HHHHTTCCCCSEECCTTSEEEETTEEEEEECCCCSSSS
T ss_pred HHHhcCCCCCcEecCCCCEEEECCEEEEEEeCCCCCCC
Confidence 3332 22234567888899999999999863 6654
No 43
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.40 E-value=7.1e-13 Score=110.89 Aligned_cols=113 Identities=7% Similarity=0.002 Sum_probs=82.9
Q ss_pred CeeEEEEEecCCCCCCcEEEE--EECCeEEEEecCchHHH---HHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhh
Q psy16255 30 GIVNLQVLGSGARGAPKSLYL--FTDQSRYLFNCGEGTQR---LAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQD 104 (156)
Q Consensus 30 ~~m~l~~LGtg~~~~~~s~~I--~~~~~~iLiD~G~g~~~---~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~ 104 (156)
.+|+++.+-.|.. ..+||+| +.++..+|||+|.+... .+.+.++ +|++||+||.|+||++|+..|....
T Consensus 2 ~~m~i~~~~~~~~-~~n~yli~~~~~~~~ilID~g~~~~~~~~~l~~~~~---~i~~Il~TH~H~DH~gg~~~l~~~~-- 75 (474)
T 3tp9_A 2 NAMYLRRFYDEGL-AHASYLVGCQETGEACVIDPARDVEPYLLTAKREGL---RIVAALETHIHADFVSGAREMADRA-- 75 (474)
T ss_dssp CCEEEEEEEETTT-TEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTC---EEEEEECSSCCSSSCCCHHHHHHHH--
T ss_pred CceEEEEEecCCc-eeEEEEEEECCCCEEEEEcCCCChHHHHHHHHHcCC---eeEEEEcCcCchhhhCCHHHHHHHH--
Confidence 4688888877663 4589999 55678999999976433 4445554 5899999999999999998886543
Q ss_pred CCCCceEEEcCccc--cccc-c--eeeEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 105 VGVPEINLHGPEGL--VSEN-M--GLASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 105 ~~~~~l~Iygp~~~--~l~~-~--~~~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
..+||+++.. .+.. + ....+.++.++.+.+++++|+.+.+. |+.
T Consensus 76 ----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~ 125 (474)
T 3tp9_A 76 ----GAAICVSDEGPPEWKSEYVKAYPHRLLKDGDELHFGNVRIVVMHTPGHTP 125 (474)
T ss_dssp ----CCEEEEECCSCGGGCCGGGGGSSEEEECTTCEEEETTEEEEEEECCSSSS
T ss_pred ----CCcEEEcCcchhhhcccccccccceECCCCCEEEECCEEEEEEECCCCCC
Confidence 3678877655 2221 1 12235678899999999999999987 543
No 44
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.39 E-value=2.7e-12 Score=99.96 Aligned_cols=106 Identities=14% Similarity=0.206 Sum_probs=76.1
Q ss_pred eEEEEEecCCCCCCcEEEEEEC--CeEEEEecCch--HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCC
Q psy16255 32 VNLQVLGSGARGAPKSLYLFTD--QSRYLFNCGEG--TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGV 107 (156)
Q Consensus 32 m~l~~LGtg~~~~~~s~~I~~~--~~~iLiD~G~g--~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~ 107 (156)
|+|+++-+|. ..+||+|..+ +..+|||+|.+ +...+.+.++ ++++|++||.|+||++|+..|...+
T Consensus 1 m~i~~i~~~~--~n~~yli~~~~~~~~vlID~G~~~~i~~~l~~~g~---~i~~IllTH~H~DH~gg~~~l~~~~----- 70 (260)
T 1qh5_A 1 MKVEVLPALT--DNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGV---KLTTVLTTHHHWDHAGGNEKLVKLE----- 70 (260)
T ss_dssp CEEEEEEETT--TEEEEEEEETTTTEEEEESCSSHHHHHHHHHHHTC---EEEEEECCCSSHHHHTTHHHHHHHS-----
T ss_pred CEEEEEEecC--ceEEEEEEECCCCEEEEEcCCCHHHHHHHHHHcCC---CccEEEeCCCCccccCCHHHHHHHC-----
Confidence 5677777662 2358999874 57899999975 3455666665 4899999999999999998876542
Q ss_pred CceEEEcCcccccccceeeEEEcCCCCCeEeCCEEEEEEEcC-CC
Q psy16255 108 PEINLHGPEGLVSENMGLASNSISPSDPALIQARTLMKIPLR-PR 151 (156)
Q Consensus 108 ~~l~Iygp~~~~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-H~ 151 (156)
...+||+++..+-. ....+..|+.+.+++++++.+.+. |+
T Consensus 71 ~~~~v~~~~~~~~~----~~~~~~~g~~~~~g~~~~~vi~tPGHt 111 (260)
T 1qh5_A 71 SGLKVYGGDDRIGA----LTHKITHLSTLQVGSLNVKCLATPCHT 111 (260)
T ss_dssp TTCEEEESCTTSTT----CSEECCTTCEEEETTEEEEEEECCSSS
T ss_pred CCCEEEECcccCCC----CCEEeCCCCEEEECCEEEEEEECCCCC
Confidence 13789998654211 123457788889999888888774 54
No 45
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.39 E-value=6.8e-13 Score=99.18 Aligned_cols=77 Identities=10% Similarity=0.144 Sum_probs=60.7
Q ss_pred eEEEEEecCCCCCCcEEEEEECCeEEEEecCchHH---HHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCC
Q psy16255 32 VNLQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ---RLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVP 108 (156)
Q Consensus 32 m~l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~---~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~ 108 (156)
|+|+++..|. ...+|++|+.++..+|||+|.+.. ..+.+.+. ++++||+||.|+||++|+..+...+
T Consensus 1 M~i~~~~~g~-~~~n~~li~~~~~~iliD~G~~~~~l~~~l~~~g~---~i~~vilTH~H~DH~gg~~~l~~~~------ 70 (207)
T 2zwr_A 1 MRVFPVTLGP-LQENAYLVETGEGPVLIDPGDEPEKLLALFQTTGL---IPLAILLTHAHFDHVGAVAPLVEAL------ 70 (207)
T ss_dssp CEEEEEEETT-TTEEEEEEEETTEEEEECCCSCHHHHHHHHHHHTC---CCSCEECSCCCGGGTTTHHHHHHHH------
T ss_pred CeEEEEecCC-cccEEEEEEeCCcEEEEeCCCCHHHHHHHHHHcCC---cccEEEECCCChHHHccHHHHHHHh------
Confidence 6788888865 456899999988999999998653 34555554 4899999999999999998775432
Q ss_pred ceEEEcCccc
Q psy16255 109 EINLHGPEGL 118 (156)
Q Consensus 109 ~l~Iygp~~~ 118 (156)
..+||+++..
T Consensus 71 ~~~v~~~~~~ 80 (207)
T 2zwr_A 71 DLPVYLHPLD 80 (207)
T ss_dssp CCCEEECGGG
T ss_pred CCcEEECHHH
Confidence 3679998877
No 46
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.37 E-value=2.3e-13 Score=104.44 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=77.5
Q ss_pred eeEEEEEecCCC------------------CCCcEEEEEECCeEEEEecCch----------------------------
Q psy16255 31 IVNLQVLGSGAR------------------GAPKSLYLFTDQSRYLFNCGEG---------------------------- 64 (156)
Q Consensus 31 ~m~l~~LGtg~~------------------~~~~s~~I~~~~~~iLiD~G~g---------------------------- 64 (156)
.|++.+|++|.- ...+|++|+.++..+|||||.+
T Consensus 7 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 86 (254)
T 3dha_A 7 VKKLYFIPAGRCMLDHSSVNSALTPGKLLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDR 86 (254)
T ss_dssp BSEEEEEEEEEEEEEGGGTSTTSCSCCEEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGS
T ss_pred ceEEEEecCccEEechhhccCCCCCCceEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhh
Confidence 478999998872 0126999999999999999965
Q ss_pred HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--ccc-------cc---eeeEEEcCC
Q psy16255 65 TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSE-------NM---GLASNSISP 132 (156)
Q Consensus 65 ~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~-------~~---~~~~~~~~~ 132 (156)
+...+.+.++++.+|++||+||.|+||++|++.|. ..+||+++.. .+. .. ...+...+
T Consensus 87 l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (254)
T 3dha_A 87 IVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAFT---------NTPIIVQRTEYEAALHREEYMKECILPHLNYKIIE- 156 (254)
T ss_dssp HHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGCS---------SSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEEC-
T ss_pred HHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHCC---------CCEEEECHHHHHHhhccccccccccCcccceEEec-
Confidence 45678888999999999999999999999997541 3678888765 211 00 11233333
Q ss_pred CCCeEeCCEEEEEEEcCCC
Q psy16255 133 SDPALIQARTLMKIPLRPR 151 (156)
Q Consensus 133 ~~~~~~~~~~V~~~~~~H~ 151 (156)
+.....++++|...| -|+
T Consensus 157 ~~~~~~~~i~~~~~p-GHt 174 (254)
T 3dha_A 157 GDYEVVPGVQLLYTP-GHS 174 (254)
T ss_dssp SSEEEETTEEEEECC-SSS
T ss_pred CCccccCCEEEEECC-CCC
Confidence 444556677776655 355
No 47
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.36 E-value=2.4e-12 Score=99.80 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=73.5
Q ss_pred CcEEEEEECCeEEEEecCchHH-----HHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc-
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGTQ-----RLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL- 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~~-----~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~- 118 (156)
.+||+|.. ++.+|||+|.+.. ..+.+. ++..+|++|++||.|.||++|+..+...+ +..+||+++..
T Consensus 43 ~N~yli~~-~~~iLID~G~~~~~~~~~~~l~~~-~~~~~i~~IilTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~ 115 (262)
T 3hnn_A 43 SNSYVIEG-DKTAIIDPPVESFMKIYLEALQQT-VNLKKLDYVILGHFSPNRIPTFKALLELA-----PQITFVCSLPAA 115 (262)
T ss_dssp EEEEEEES-SSEEEECCCCHHHHHHHHHHHHHH-SCGGGEEEEECSSCCGGGHHHHHHHHHHC-----TTCEEEECHHHH
T ss_pred EEEEEEEC-CCEEEEECCCcchHHHHHHHHHHh-CChhhCCEEEECCCCcchhchHHHHHHHC-----CCCEEEECHHHH
Confidence 37899986 7899999997631 334443 56678999999999999999998886532 24789999877
Q ss_pred -cccc----ceeeEEEcCCCCCeEeC-CEEEEEEEcCC
Q psy16255 119 -VSEN----MGLASNSISPSDPALIQ-ARTLMKIPLRP 150 (156)
Q Consensus 119 -~l~~----~~~~~~~~~~~~~~~~~-~~~V~~~~~~H 150 (156)
+++. .....+.++.++.++++ +.+++.+++.+
T Consensus 116 ~~l~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~tpg 153 (262)
T 3hnn_A 116 GDLRAAFPDDNLNILPMRGKETLDLGKGHVLKFLPIPS 153 (262)
T ss_dssp HHHHHHSSSSCCEEEECCSSCEEECSTTCEEEEEECCC
T ss_pred HHHHHHhCCCCCceEEeCCCCEEEcCCCcEEEEEECCC
Confidence 3321 12456778889999998 77777776654
No 48
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.35 E-value=5.2e-12 Score=100.75 Aligned_cols=120 Identities=10% Similarity=0.110 Sum_probs=81.2
Q ss_pred CCCeeEEEEEecCCCCCCcEEEEEE--CCeEEEEecCch---HHHHHHHc----CCC--cCCcCeEEEcCCChhhhcChH
Q psy16255 28 VPGIVNLQVLGSGARGAPKSLYLFT--DQSRYLFNCGEG---TQRLAHEH----KMK--LAKLDSVFITQPVWENLGGLL 96 (156)
Q Consensus 28 ~~~~m~l~~LGtg~~~~~~s~~I~~--~~~~iLiD~G~g---~~~~l~~~----~~~--~~~i~~IfiTH~H~DHi~GL~ 96 (156)
.+..|+++.+.+.+ ..+||+|.. ++..+|||+|.. +...+.+. ++. +.+|++||+||.|+||++|+.
T Consensus 25 ~~~~m~i~~i~~~~--~n~~ylI~~~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~ 102 (311)
T 2p18_A 25 FGSAFSVTVVPTLK--DNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNA 102 (311)
T ss_dssp ETTTEEEEEEEETT--TEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHH
T ss_pred CCCCcEEEEEecCC--CcEEEEEEeCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHH
Confidence 34557888887643 235999988 578999999633 34455554 431 357999999999999999999
Q ss_pred HHHHHHhhCC-CCceEEEcCcccccccceeeEEEcCCCCCeEeCCEEEEEEEc-CCCC
Q psy16255 97 GLALTIQDVG-VPEINLHGPEGLVSENMGLASNSISPSDPALIQARTLMKIPL-RPRL 152 (156)
Q Consensus 97 ~l~~~~~~~~-~~~l~Iygp~~~~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~H~~ 152 (156)
.|...+.... ....+||+++...+.. ....++.|+.+.+++++|+.+.+ -|+.
T Consensus 103 ~l~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~l~~g~~l~lg~~~l~vi~tPGHT~ 157 (311)
T 2p18_A 103 KLKAELEAMNSTVPVVVVGGANDSIPA---VTKPVREGDRVQVGDLSVEVIDAPCHTR 157 (311)
T ss_dssp HHHHHHHSCC--CCCEEEEEGGGTCTT---CSEEECTTCEEEETTEEEEEEECCSSST
T ss_pred HHHHhhhhcccCCCCEEEEechhcCCC---CceEeCCCCEEEECCeEEEEEECCCCCc
Confidence 8866542111 1147899987652111 22446778889999999999888 4653
No 49
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.33 E-value=2.2e-12 Score=108.09 Aligned_cols=114 Identities=9% Similarity=0.013 Sum_probs=81.3
Q ss_pred CCeeEEEEEecCCCCCCcEEEEE--ECCeEEEEecCchHHH---HHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHh
Q psy16255 29 PGIVNLQVLGSGARGAPKSLYLF--TDQSRYLFNCGEGTQR---LAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQ 103 (156)
Q Consensus 29 ~~~m~l~~LGtg~~~~~~s~~I~--~~~~~iLiD~G~g~~~---~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~ 103 (156)
..+|.++.+-++. ...+||+|. .+++.+|||+|.+... .+.+.++ +|++||+||.|+||++|+..|...+
T Consensus 22 ~~~m~i~~~~~~~-~~~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~- 96 (466)
T 3r2u_A 22 SNAMFFKQFYDKH-LSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGL---TITHAAETHIHADFASGIRDVAIKL- 96 (466)
T ss_dssp -CCEEEEEEEETT-TTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTC---EEEEEECSSCCSSSCCCHHHHHHHH-
T ss_pred CCCeEEEEEecCC-ccceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCCC---eeeEEEECCCChhhhccHHHHHHhh-
Confidence 3457777776655 345799995 3578999999976543 3444554 5999999999999999998886543
Q ss_pred hCCCCceEEEcCccc--cccc--ceeeEEEcCCCCCeEeCCEEEEEEEcC-CCC
Q psy16255 104 DVGVPEINLHGPEGL--VSEN--MGLASNSISPSDPALIQARTLMKIPLR-PRL 152 (156)
Q Consensus 104 ~~~~~~l~Iygp~~~--~l~~--~~~~~~~~~~~~~~~~~~~~V~~~~~~-H~~ 152 (156)
..+||+++.. .+.. .......++.++.+++++++|+.+.+. |+.
T Consensus 97 -----~a~v~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~l~vi~tPGHT~ 145 (466)
T 3r2u_A 97 -----NANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTP 145 (466)
T ss_dssp -----CCEEEEECCSCTTTSCCSCCTTCEEECTTCEEEETTEEEEEEECCSSST
T ss_pred -----CCeEEECcchhhhhccccCCCCCEEeCCCCEEEECCEEEEEEECCCCCC
Confidence 3678887754 2221 111345678889999999999999987 553
No 50
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.32 E-value=4.4e-12 Score=95.64 Aligned_cols=98 Identities=12% Similarity=0.050 Sum_probs=70.7
Q ss_pred CcEEEEEECCeEEEEecCch------HHHHHHHc-CCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCcc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEG------TQRLAHEH-KMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEG 117 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g------~~~~l~~~-~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~ 117 (156)
.+|++|+.++..+|||+|.+ ....+.+. + .+|++||+||.|+||++|+..+.. ..++||+++.
T Consensus 27 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~g---~~i~~vi~TH~H~DH~gg~~~~~~-------~~~~v~~~~~ 96 (223)
T 1m2x_A 27 ANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHG---KKVIMNIATHSHDDRAGGLEYFGK-------IGAKTYSTKM 96 (223)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHC---CCEEEEECSSSSTTTTTTHHHHHH-------TTCEEEEEHH
T ss_pred ccEEEEEeCCEEEEEeCCCChhHHHHHHHHHHHHhC---CCeEEEEeccCCccccCchhhHhh-------CCCeEEEcHH
Confidence 57999998889999999964 22344444 4 369999999999999999987653 2478999887
Q ss_pred c--ccccc--eeeEEEcCCCCCeEeCCEEEEEEE-c-CCCC
Q psy16255 118 L--VSENM--GLASNSISPSDPALIQARTLMKIP-L-RPRL 152 (156)
Q Consensus 118 ~--~l~~~--~~~~~~~~~~~~~~~~~~~V~~~~-~-~H~~ 152 (156)
. +++.. ......++.+..+.+++.+|+.+. + .|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~ 137 (223)
T 1m2x_A 97 TDSILAKENKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTA 137 (223)
T ss_dssp HHHHHHHTTCCCCSEEESSCEEEEETTEEEEEECCCSSSSS
T ss_pred HHHHHHhcCccCCceecCCCceEEECCEEEEEEecCCCCCC
Confidence 6 33321 111245677888899999999983 4 4653
No 51
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.31 E-value=9.9e-12 Score=97.85 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=73.5
Q ss_pred CCCcEEEE-EECCeEEEEecCchH-----HHHHHHcCC-CcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcC
Q psy16255 43 GAPKSLYL-FTDQSRYLFNCGEGT-----QRLAHEHKM-KLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGP 115 (156)
Q Consensus 43 ~~~~s~~I-~~~~~~iLiD~G~g~-----~~~l~~~~~-~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp 115 (156)
...+|++| ..++..+|||+|.+. ...+.+. + +..+|++|++||.|+||++|+..+...+ +..+||++
T Consensus 22 ~~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~-~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~-----~~a~v~~~ 95 (303)
T 2vw8_A 22 VQVPVFLLRLGEASWALVEGGISRDAELVWADLCRW-VADPSQVHYWLITHKHYDHCGLLPYLCPRL-----PNVQVLAS 95 (303)
T ss_dssp TTSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHH-CSCGGGEEEEECCCCSTTTTTTHHHHGGGC-----TTCEEEEE
T ss_pred CCceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHH-hcCcccceEEEeccCCccccCCHHHHHHhC-----CCCeEEEC
Confidence 34679999 478889999999863 2344444 3 5678999999999999999998774321 24789988
Q ss_pred ccc--cccc-----------------c----------eeeEEEcCCCCCeEeCC-EEEEEEEcC-CCC
Q psy16255 116 EGL--VSEN-----------------M----------GLASNSISPSDPALIQA-RTLMKIPLR-PRL 152 (156)
Q Consensus 116 ~~~--~l~~-----------------~----------~~~~~~~~~~~~~~~~~-~~V~~~~~~-H~~ 152 (156)
+.. .+.. + .+....++.|+.+++++ ++++.+.+. |+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~ 163 (303)
T 2vw8_A 96 ERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSD 163 (303)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSST
T ss_pred HHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCc
Confidence 765 2111 0 12346678888888887 888887764 543
No 52
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.28 E-value=7.5e-12 Score=94.62 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=69.3
Q ss_pred CcEEEEEECCeEEEEecCchHH------HHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGTQ------RLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~~------~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
.+|++|+.++..+|||||.+.. ..+.+.. ..+|++|++||.|+||++|+..+... .++||+++..
T Consensus 41 ~n~~li~~~~~~iliD~G~~~~~~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~l~~~-------~~~v~~~~~~ 111 (227)
T 1mqo_A 41 SNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKF--QKRVTDVIITHAHADRIGGIKTLKER-------GIKAHSTALT 111 (227)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHH--TSCEEEEECCCCSHHHHTTHHHHHHH-------TCEEECBHHH
T ss_pred ceEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhc--CCCceEEEeCCCCchhccchHHHhhC-------CcEEEeccch
Confidence 4799999889999999998752 2233321 46899999999999999999877542 3789998876
Q ss_pred --cccc--ceeeEEEcCCCCCeEeCCEEEEEE-Ec-CCC
Q psy16255 119 --VSEN--MGLASNSISPSDPALIQARTLMKI-PL-RPR 151 (156)
Q Consensus 119 --~l~~--~~~~~~~~~~~~~~~~~~~~V~~~-~~-~H~ 151 (156)
+++. +......++.+..+.+++++|+.+ ++ -|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~pgHt 150 (227)
T 1mqo_A 112 AELAKKNGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHT 150 (227)
T ss_dssp HHHHHHTTCCCCCCCBCSEEEEEETTEEEEEECCCCSSS
T ss_pred HHHHHhcCCCCCccccCCCCeeeECCEEEEEEecCCCCC
Confidence 3321 211223455666788899999886 33 465
No 53
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.28 E-value=5.5e-12 Score=95.74 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=70.2
Q ss_pred CcEEEEEECCeEEEEecCchH------HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGT------QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~------~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
.+|++|+.++..+|||+|.+. ...+.+.+ ..+|++|++||.|+||++|+..+.. ..++||+++..
T Consensus 37 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~ 107 (232)
T 1a7t_A 37 SNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSL--HAKVTTFIPNHWHGDCIGGLGYLQR-------KGVQSYANQMT 107 (232)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHH--CCEEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHH
T ss_pred ceEEEEEeCCEEEEEeCCCCHHHHHHHHHHHHHhc--CCCeEEEEeCCCCccccCCHHHHHh-------CCCeEEEcHHH
Confidence 479999998899999999752 23344432 2579999999999999999987653 14789998876
Q ss_pred --cccc--ceeeEEEcCCCCCeEeCCEEEEEEE-c-CCC
Q psy16255 119 --VSEN--MGLASNSISPSDPALIQARTLMKIP-L-RPR 151 (156)
Q Consensus 119 --~l~~--~~~~~~~~~~~~~~~~~~~~V~~~~-~-~H~ 151 (156)
+++. +......++.+..+.+++.+++.+. + .|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt 146 (232)
T 1a7t_A 108 IDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHA 146 (232)
T ss_dssp HHHHHHHTCCCCSEEESSEEEEEETTEEEEEECCCCSSS
T ss_pred HHHHHhcCCCCCceecCCCCEEEECCeEEEEEeCCCCCC
Confidence 3332 2112344567778888999999884 4 454
No 54
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.26 E-value=9.2e-12 Score=101.97 Aligned_cols=100 Identities=11% Similarity=0.008 Sum_probs=74.2
Q ss_pred CcEEEEEECCeEEEEecCchH-----HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc-
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGT-----QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL- 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~-----~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~- 118 (156)
.+|++|.. +..+|||+|.+. ...+.+. +++.+|++||+||.|.||++|+..+...+ +..+||+++..
T Consensus 41 ~n~~li~~-~~~iLID~G~~~~~~~~~~~l~~~-~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~ 113 (414)
T 2q9u_A 41 YNSYFIDD-ECPTVIDSVKYPFAEEWLSRIAAC-CPLDKIKYVVMNHAEGDHASSLKDHYHKF-----TNATFVCTKKCQ 113 (414)
T ss_dssp ECCEEECS-SSCEEECCCCGGGHHHHHHHHHHH-SCGGGCCEEECSCCSGGGTTTHHHHGGGS-----TTCEEEECHHHH
T ss_pred eeEEEEEC-CCEEEEeCCCcccHHHHHHHHHHh-cCcccCCEEEeCCCCcchhcCHHHHHHHC-----CCCEEEECHHHH
Confidence 46899984 778999999852 2344444 56678999999999999999998775321 35789999876
Q ss_pred -cccc-c---eeeEEEcCCCCCeEeCCEEEEEEEcC--CC
Q psy16255 119 -VSEN-M---GLASNSISPSDPALIQARTLMKIPLR--PR 151 (156)
Q Consensus 119 -~l~~-~---~~~~~~~~~~~~~~~~~~~V~~~~~~--H~ 151 (156)
.++. + ......++.++.+.+++.+++.+++. |+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt 153 (414)
T 2q9u_A 114 EHLKILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHW 153 (414)
T ss_dssp HHHHHHHCCTTCCEEECCTTCCEECSSCEEEEEECTTSSS
T ss_pred HHHHHHhCCCCCeeEEeCCCCEEEECCeEEEEEeCCCCCC
Confidence 3321 1 12456778888999999888888886 75
No 55
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.26 E-value=3.3e-12 Score=102.44 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=56.0
Q ss_pred cEEEEEECCeEEEEecCch---------HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCc
Q psy16255 46 KSLYLFTDQSRYLFNCGEG---------TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPE 116 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g---------~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~ 116 (156)
+|++|+.++..+|||+|.+ +...+.+.++++.+|++|++||.|+||++|+..++. ......+||+++
T Consensus 98 n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~----~~fp~a~v~~~~ 173 (331)
T 1p9e_A 98 TGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQ----LAFPNAVVRADQ 173 (331)
T ss_dssp EEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTE----ESSTTCEEECBH
T ss_pred EEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCccccccc----ccCCCCEEEECH
Confidence 4999998889999999987 677888899999999999999999999999963210 011347899887
Q ss_pred cc
Q psy16255 117 GL 118 (156)
Q Consensus 117 ~~ 118 (156)
..
T Consensus 174 ~~ 175 (331)
T 1p9e_A 174 KE 175 (331)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 56
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.25 E-value=2.8e-11 Score=100.10 Aligned_cols=99 Identities=8% Similarity=0.082 Sum_probs=75.5
Q ss_pred cEEEEEECCeEEEEecCchH-HH----HHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--
Q psy16255 46 KSLYLFTDQSRYLFNCGEGT-QR----LAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL-- 118 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g~-~~----~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~-- 118 (156)
|||+|..+++.+|||+|... .. .+.+. +++.+|++|++||.|.||++|++.++..+. +.+.||+++..
T Consensus 53 NsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~-i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~----~~~~v~~s~~~~~ 127 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGWKGNYAKEFIDALSKI-VDPKEITHIIVNHTEPDASGSLPATLKTIG----HDVEIIASNFGKR 127 (410)
T ss_dssp EEEEEECSSCEEEECCCCGGGHHHHHHHHTTT-SCGGGCCEEECSCCCHHHHTTHHHHHHHHC----SCCEEEECHHHHH
T ss_pred EEEEEEECCeEEEEeCCCcchHHHHHHHHHHh-cCcccCCEEEeCcCCcchhhhHHHHHHHcC----CCCEEEeCHHHHH
Confidence 79999888899999998642 22 23332 677899999999999999999998876542 25789988766
Q ss_pred ccccc--eeeEEEcCCCCCeEeCCEEEEEEEcC
Q psy16255 119 VSENM--GLASNSISPSDPALIQARTLMKIPLR 149 (156)
Q Consensus 119 ~l~~~--~~~~~~~~~~~~~~~~~~~V~~~~~~ 149 (156)
+++.+ ...+..++.|+.+.+++.+++.+++.
T Consensus 128 ~l~~~~~~~~~~~v~dGd~l~lG~~~L~~i~tP 160 (410)
T 4dik_A 128 LLEGFYGIKDVTVVKDGEEREIGGKKFKFVMTP 160 (410)
T ss_dssp HHHHHHCCCCEEECCTTCEEEETTEEEEEEECT
T ss_pred HHHhhcCccceeEecCCCEEeecceEEEEecCC
Confidence 44321 12456788999999999998888775
No 57
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.21 E-value=7.5e-12 Score=102.13 Aligned_cols=88 Identities=7% Similarity=0.021 Sum_probs=67.6
Q ss_pred cEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--ccc-c
Q psy16255 46 KSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSE-N 122 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~-~ 122 (156)
+++++..++..++||+..- -++.+|++|||||.|.||++|++. ...++||+++.+ +++ .
T Consensus 28 ~p~~~~~pG~~ilVD~f~~---------~~~~~IdaI~lTH~H~DHiggl~~---------~~~~pIy~s~~t~~ll~~~ 89 (367)
T 4b87_A 28 CPFYKKIPGTGFTVDAFQY---------GVVEGCTAYFLTHFHSDHYAGLSK---------HFTFPVYCSEITGNLLKNK 89 (367)
T ss_dssp CCGGGBCTTSSEEESCCSS---------SSCTTCCEEECCCCCHHHHTTCST---------TCCSCEEECHHHHHHHHHH
T ss_pred CceEEEECCCeEEEeCCCc---------CCccCCcEEEECcChHHHhCCccc---------ccCCcEEECHHHHHHHHHH
Confidence 4455557788999998532 245789999999999999999972 124679999987 332 1
Q ss_pred c---eeeEEEcCCCCCeEeCCEEEEEEEcCCC
Q psy16255 123 M---GLASNSISPSDPALIQARTLMKIPLRPR 151 (156)
Q Consensus 123 ~---~~~~~~~~~~~~~~~~~~~V~~~~~~H~ 151 (156)
+ ...++.++.++.+++++++|+++++.|.
T Consensus 90 l~~~~~~~~~l~~g~~~~ig~~~v~~~~agH~ 121 (367)
T 4b87_A 90 LHVQEQYIHPLPLDTECIVNGVKVVLLDANHC 121 (367)
T ss_dssp SCCCGGGEEECCBTSCEEETTEEEEEEECSSS
T ss_pred hccccceEEEeCCCCEEEECCEEEEEEeCCCc
Confidence 2 2346778889999999999999999994
No 58
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.20 E-value=6.9e-12 Score=95.74 Aligned_cols=96 Identities=9% Similarity=0.099 Sum_probs=65.7
Q ss_pred CcEEEEEECCeEEEEecCch------HHHHHHHc-CCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCcc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEG------TQRLAHEH-KMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEG 117 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g------~~~~l~~~-~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~ 117 (156)
.+||+|+.++..+|||||.+ ....+.+. +. +|++||+||.|+||++|+..+... .++||+++.
T Consensus 48 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~~~---~i~~vi~TH~H~DH~gg~~~l~~~-------~~~v~~~~~ 117 (243)
T 4hl2_A 48 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINL---PVALAVVTHAHQDKMGGMDALHAA-------GIATYANAL 117 (243)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCC---CEEEEEECSSSHHHHTTHHHHHHT-------TCEEEEEHH
T ss_pred ceEEEEEECCcEEEEECCCCCccHHHHHHHHHHhhCC---CeeEEEECCCCccccCCHHHHHhC-------CCeEEECHH
Confidence 47999999899999999943 22334443 43 599999999999999999877531 478999887
Q ss_pred c--ccccc-------eee---EEEcCCCCCeEeCCEEEEEEEc-CCC
Q psy16255 118 L--VSENM-------GLA---SNSISPSDPALIQARTLMKIPL-RPR 151 (156)
Q Consensus 118 ~--~l~~~-------~~~---~~~~~~~~~~~~~~~~V~~~~~-~H~ 151 (156)
. +++.. .+. ...++.++.+.+++++| .+.+ -|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v-~~~~pGHt 163 (243)
T 4hl2_A 118 SNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKV-FYPGPGHT 163 (243)
T ss_dssp HHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCTTEEE-ECCCSSSS
T ss_pred HHHHHhcccccccccccccccceEecCCCeEEECCEEE-EeCCCCCC
Confidence 6 33321 010 12245667788889888 4333 355
No 59
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.19 E-value=4e-11 Score=91.15 Aligned_cols=78 Identities=5% Similarity=-0.028 Sum_probs=50.3
Q ss_pred cEEEEEECCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccccccccee
Q psy16255 46 KSLYLFTDQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGLVSENMGL 125 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~~l~~~~~ 125 (156)
+|++|+.++..+|||||.+.. .......++++|||||.|+||++ ++.+. ....++.
T Consensus 21 ~~~li~~~~~~iLiD~g~~~~----~~~~~~~~id~VliTH~H~DH~~-~~~l~--------~~~~vi~----------- 76 (220)
T 1vjn_A 21 ACFALEMEGKTIVTDPFDESV----GYPIPNVTADVVTESHQHFDHNA-HHLVK--------GNFRVID----------- 76 (220)
T ss_dssp TEEEEEETTEEEEESCCC---------CCCCCBCSEEECSSCC---CG-GGGCB--------SSCEEEC-----------
T ss_pred CEEEEEECCEEEEEcCCCCcC----CCCcCCCCcCEEEECCCCCCCCC-chHhc--------CCCEEEc-----------
Confidence 699999999999999998742 12334678999999999999998 75321 1123321
Q ss_pred eEEEcCCCCCeEeCCEEEEEEEcCCCCC
Q psy16255 126 ASNSISPSDPALIQARTLMKIPLRPRLP 153 (156)
Q Consensus 126 ~~~~~~~~~~~~~~~~~V~~~~~~H~~p 153 (156)
.++ .+++++++|+++|+.|+.+
T Consensus 77 -----~~g-~~~~~~~~I~~~~~~H~~~ 98 (220)
T 1vjn_A 77 -----RPG-AYTVNGVKIKGVETFHDPS 98 (220)
T ss_dssp -----SSE-EEEETTEEEEEEEEEEC--
T ss_pred -----CCC-eEEECCEEEEEEeeecCCC
Confidence 112 5667888899988888753
No 60
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.17 E-value=5.2e-11 Score=89.40 Aligned_cols=78 Identities=12% Similarity=0.021 Sum_probs=55.4
Q ss_pred EEEEecCCCCCCcEEEEEECCeEEEEecCchH--HHHHHH--cCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCc
Q psy16255 34 LQVLGSGARGAPKSLYLFTDQSRYLFNCGEGT--QRLAHE--HKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE 109 (156)
Q Consensus 34 l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~--~~~l~~--~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~ 109 (156)
+..+..+.....+|++|..++..+|||+|.+. ...+.+ ..+...+|++|++||.|+||++|+..|.. ..
T Consensus 12 v~~~~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-------~~ 84 (227)
T 3iog_A 12 VYVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS-------IG 84 (227)
T ss_dssp EEEEEECSSSCEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH-------TT
T ss_pred EEEEECCCcccCcEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh-------CC
Confidence 34444443345689999988889999999742 222221 12456789999999999999999987642 24
Q ss_pred eEEEcCccc
Q psy16255 110 INLHGPEGL 118 (156)
Q Consensus 110 l~Iygp~~~ 118 (156)
.+||+++..
T Consensus 85 ~~v~~~~~~ 93 (227)
T 3iog_A 85 AKVVSTRQT 93 (227)
T ss_dssp CEEEEEHHH
T ss_pred CeEEECHHH
Confidence 788988766
No 61
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.16 E-value=9.2e-12 Score=97.09 Aligned_cols=70 Identities=14% Similarity=0.119 Sum_probs=55.6
Q ss_pred cEEEEEECCeEEEEecCch-------------------HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCC
Q psy16255 46 KSLYLFTDQSRYLFNCGEG-------------------TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVG 106 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g-------------------~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~ 106 (156)
+|++|+.++..+|||||.+ +...+.+.++++.+|++||+||.|+||++|++.+... ..
T Consensus 49 n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~---~~ 125 (280)
T 3esh_A 49 HPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGH---AI 125 (280)
T ss_dssp CCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSC---CS
T ss_pred EEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccc---cC
Confidence 6999999899999999965 4556777889999999999999999999999766421 00
Q ss_pred CCceEEEcCccc
Q psy16255 107 VPEINLHGPEGL 118 (156)
Q Consensus 107 ~~~l~Iygp~~~ 118 (156)
-+..+||+++..
T Consensus 126 fp~a~i~~~~~~ 137 (280)
T 3esh_A 126 FENAIHVVQQDE 137 (280)
T ss_dssp STTCEEEEEHHH
T ss_pred CCCCEEEECHHH
Confidence 125788888765
No 62
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.13 E-value=5.1e-11 Score=89.82 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=55.4
Q ss_pred EEEEecCCCCCCcEEEEEECCeEEEEecCchHH--HHHHHc--CCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCc
Q psy16255 34 LQVLGSGARGAPKSLYLFTDQSRYLFNCGEGTQ--RLAHEH--KMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPE 109 (156)
Q Consensus 34 l~~LGtg~~~~~~s~~I~~~~~~iLiD~G~g~~--~~l~~~--~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~ 109 (156)
+..+..+.....+|++|..++..+|||+|.+.. ..+.+. .+...+|++|++||.|+||++|+..|. . ..
T Consensus 15 v~~i~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~-~------~~ 87 (233)
T 3q6v_A 15 LYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWK-T------LG 87 (233)
T ss_dssp EEEEEECSSSCEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHH-H------TT
T ss_pred EEEEeCCCcCCCcEEEEEeCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHh-h------CC
Confidence 444554433456899999888999999997642 222211 123568999999999999999998775 1 24
Q ss_pred eEEEcCccc
Q psy16255 110 INLHGPEGL 118 (156)
Q Consensus 110 l~Iygp~~~ 118 (156)
.+||+++..
T Consensus 88 ~~v~~~~~~ 96 (233)
T 3q6v_A 88 AKIVATQMT 96 (233)
T ss_dssp CEEEEEHHH
T ss_pred CEEEEcHHH
Confidence 789988766
No 63
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.13 E-value=1.9e-10 Score=87.57 Aligned_cols=100 Identities=7% Similarity=-0.103 Sum_probs=66.2
Q ss_pred CCcEEEEEECC-eEEEEecCchH------HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCc
Q psy16255 44 APKSLYLFTDQ-SRYLFNCGEGT------QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPE 116 (156)
Q Consensus 44 ~~~s~~I~~~~-~~iLiD~G~g~------~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~ 116 (156)
..+|++|..++ ..+|||+|.+. ...+.+. +....+ +|++||.|+||++|+..+.. . ..+||+++
T Consensus 29 ~~n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~~-~~~~~~-~vi~TH~H~DH~gg~~~l~~-~------~~~v~~~~ 99 (246)
T 2fhx_A 29 SSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKT-MKPKKV-VAINTHFHLDGTGGNEIYKK-M------GAETWSSD 99 (246)
T ss_dssp TEEEEEEECTTSEEEEESCCSSHHHHHHHHHHHHHH-HCCSEE-EEECCSSSHHHHTTHHHHHH-T------TCEEEEEH
T ss_pred CCCEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHHh-cCCCcE-EEEeCCCCccccChHHHHhh-c------CCEEEEcH
Confidence 45899998664 68999999752 2233332 333445 79999999999999976643 1 36899887
Q ss_pred cc--cccc------------c----------------eeeEEEcCCCCCeEeCCEEEEEEE-c-CCCC
Q psy16255 117 GL--VSEN------------M----------------GLASNSISPSDPALIQARTLMKIP-L-RPRL 152 (156)
Q Consensus 117 ~~--~l~~------------~----------------~~~~~~~~~~~~~~~~~~~V~~~~-~-~H~~ 152 (156)
.. ++.. + .-.+..++.++.+++++.+++.+. + -|+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~ 167 (246)
T 2fhx_A 100 LTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSP 167 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSST
T ss_pred HHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCC
Confidence 65 2110 0 012335677778889999888873 4 3653
No 64
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.07 E-value=1.5e-10 Score=90.83 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=57.8
Q ss_pred CeeEEEEEecCCC------CCCcEEEEEECCeEEEEecCch--HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHH
Q psy16255 30 GIVNLQVLGSGAR------GAPKSLYLFTDQSRYLFNCGEG--TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALT 101 (156)
Q Consensus 30 ~~m~l~~LGtg~~------~~~~s~~I~~~~~~iLiD~G~g--~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~ 101 (156)
.-|++.+|--..+ ..+.|++|+. +|||+|.+ +.+.+.+.++++. ++|++||.|+||++|++.+
T Consensus 11 ~~~~~~~~~~~~~~~~l~~~~G~s~lie~----iLiD~G~~~~l~~~l~~~gi~~~--~~IvlTH~H~DH~ggl~~l--- 81 (267)
T 3h3e_A 11 HHMRIHVLCDDSSQNGFESEHGFSVLVDS----VLFDTGKSDVFLKNARKLGIDLP--KDVLISHGHYDHAGGLLYL--- 81 (267)
T ss_dssp -CEEEEEEECSCCCTTCCCCSSCEEEETT----EEECCCSSSHHHHHHHHTTCCCC--SEEECSCSCHHHHGGGGGC---
T ss_pred ceeEEEEEecCCCCCCceeCcEeHHeeee----EEEECCCcHHHHHHHHHCCcCcC--CEEEECCCChhhhCCHHHh---
Confidence 3478888865554 3457999964 99999987 5667788888876 9999999999999999866
Q ss_pred HhhCCCCceEEEcCccc
Q psy16255 102 IQDVGVPEINLHGPEGL 118 (156)
Q Consensus 102 ~~~~~~~~l~Iygp~~~ 118 (156)
...+||+++..
T Consensus 82 ------~~~~v~~~~~~ 92 (267)
T 3h3e_A 82 ------SGKRVWLRKEA 92 (267)
T ss_dssp ------CSCEEEEEGGG
T ss_pred ------cCCEEEECHHH
Confidence 24678887765
No 65
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.06 E-value=4.9e-10 Score=86.89 Aligned_cols=97 Identities=10% Similarity=0.040 Sum_probs=64.1
Q ss_pred CcEEEEEECCeEEEEecCchH------HHHHHHc-CCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCcc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGT------QRLAHEH-KMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEG 117 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~------~~~l~~~-~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~ 117 (156)
.+|++|+.++..+|||+|.+. ...+.+. +. +|++|++||.|+||++|+..+.. ...+||+++.
T Consensus 68 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~g~---~i~~VilTH~H~DH~gg~~~~~~-------~~a~v~~~~~ 137 (265)
T 2y8b_A 68 SNGLIVRDADELLLIDTAWGAKNTVALLAEIEKQIGL---PVTRSISTHFHDDRVGGVDVLRA-------AGVATYTSPL 137 (265)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCS---CEEEEECSSSSHHHHTTHHHHHH-------TTCEEEECHH
T ss_pred ceEEEEEECCeEEEEeCCCCHHHHHHHHHHHHHhcCC---CeEEEEeCCCChhhcCCHHHHhh-------CCCeEEECHH
Confidence 479999998999999999742 2334444 43 68999999999999999986643 1468999887
Q ss_pred c--cccc----c-eeeEEE-cCCCCCeEeCCEEEEEEEcCCC
Q psy16255 118 L--VSEN----M-GLASNS-ISPSDPALIQARTLMKIPLRPR 151 (156)
Q Consensus 118 ~--~l~~----~-~~~~~~-~~~~~~~~~~~~~V~~~~~~H~ 151 (156)
. +++. . ...+.. .+++..+..+++++....--|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~pGHt 179 (265)
T 2y8b_A 138 TRQLAEAAGNEVPAHSLKALSSSGDVVRFGPVEVFYPGAAHS 179 (265)
T ss_dssp HHHHHHHTTCCCCSEECSSCSSTTEEEEETTEEEEECCSSSS
T ss_pred HHHHHHhcccccccccccccCCCCcEEeecCEEEEecCCCCC
Confidence 6 3221 0 011111 2455667778888852223454
No 66
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.94 E-value=8.4e-10 Score=83.45 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=49.0
Q ss_pred CcEEEEEECCeEEEEecCchH------HHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGT------QRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~------~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
.+|++|+.++..+|||+|.+. ...+.+.++ +|++|++||.|+||++|+..+.. . .++||+++..
T Consensus 33 ~n~~li~~~~~~iliD~g~~~~~~~~~~~~l~~~g~---~i~~ii~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~ 102 (228)
T 1jjt_A 33 KHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGY---KIKGSISSHFHSDSTGGIEWLNS-R------SIPTYASELT 102 (228)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHTTTC---EEEEEECSSSSHHHHTTHHHHHH-T------TCCEEEEHHH
T ss_pred ceEEEEEECCcEEEEeCCCChhhHHHHHHHHHHcCC---CeeEEEeCCCChhhhccHHHHHh-C------CCEEEEChHH
Confidence 479999988899999999752 233444443 68999999999999999986643 1 3578888766
No 67
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.92 E-value=5.5e-09 Score=77.65 Aligned_cols=94 Identities=9% Similarity=0.006 Sum_probs=64.9
Q ss_pred CCcEEEEEECCeEEEEecCch---HHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--
Q psy16255 44 APKSLYLFTDQSRYLFNCGEG---TQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL-- 118 (156)
Q Consensus 44 ~~~s~~I~~~~~~iLiD~G~g---~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~-- 118 (156)
..+|++|+.++..+|||+|.. ....+.+.+ +|++|++||. ||++|+..+...+ +.+||+++..
T Consensus 23 ~~n~~li~~~~~~iliD~g~~~~~~~~~l~~~g----~i~~ii~TH~--DH~gg~~~~~~~~------~a~v~~~~~~~~ 90 (201)
T 2p97_A 23 DFNGFAWIRPEGNILIDPVALSNHDWKHLESLG----GVVWIVLTNS--DHVRSAKEIADQT------YTKIAGPVAEKE 90 (201)
T ss_dssp EEEEEEECCTTCCEEESCCCCCHHHHHHHHHTT----CCSEEECSSG--GGCTTHHHHHHHS------CCEEEEEGGGTT
T ss_pred ceeEEEEEeCCeeEEEECCCCcHHHHHHHHhcC----CCCEEEECCc--hhhhhHHHHHHhc------CCEEEEcHhHhh
Confidence 357999988888999999953 344555554 7999999999 9999998775432 3789998876
Q ss_pred ccccceeeEEEcCCCCCeEeCCEEEEEEEcCCCC
Q psy16255 119 VSENMGLASNSISPSDPALIQARTLMKIPLRPRL 152 (156)
Q Consensus 119 ~l~~~~~~~~~~~~~~~~~~~~~~V~~~~~~H~~ 152 (156)
.++... ...++.++.+. ..+++...|.-|+.
T Consensus 91 ~~~~~~--~~~~~~g~~~~-~~~~~~~~p~gHt~ 121 (201)
T 2p97_A 91 NFPIYC--DRWLSDGDELV-PGLKVMELQGSKTP 121 (201)
T ss_dssp SCSSCC--SEEECTTCBSS-TTEEEEEECSSSST
T ss_pred hhcccC--ceecCCCCEEc-ceEEEEECCCCCCC
Confidence 333211 23455565553 26777777656763
No 68
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=98.83 E-value=1.2e-09 Score=88.08 Aligned_cols=82 Identities=7% Similarity=0.016 Sum_probs=58.5
Q ss_pred CCeEEEEecCchHHHHHHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc--cccc-c---eee
Q psy16255 53 DQSRYLFNCGEGTQRLAHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL--VSEN-M---GLA 126 (156)
Q Consensus 53 ~~~~iLiD~G~g~~~~l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~--~l~~-~---~~~ 126 (156)
.+..+.+|+-..- ...+|++|||||.|.||++||+.++ .++||+++.+ +++. + ...
T Consensus 8 ~g~~i~vD~f~~~---------~~~~i~ai~lTH~H~DHiggl~~l~---------~~pVy~s~~t~~ll~~~l~~~~~~ 69 (336)
T 3zdk_A 8 PHTPIAVDFWSLR---------RAGTARLFFLSHMHSDHTVGLSSTW---------ARPLYCSPITAHLLHRHLQVSKQW 69 (336)
T ss_dssp TTSSEEESCCCHH---------HHCSSCEEECCCCCGGGSTTCSTTC---------CSCEEECHHHHHHHHHHHCCCTTT
T ss_pred CCCCEeecCCccc---------CCCCCCEEEECCChHHHHCchHHHc---------CCCEEecHHHHHHHHHhhhhcccc
Confidence 3567888876421 1247999999999999999998752 3689999987 3321 1 113
Q ss_pred EEEcCCCCCeEe-------CCEEEEEEEcCCCCC
Q psy16255 127 SNSISPSDPALI-------QARTLMKIPLRPRLP 153 (156)
Q Consensus 127 ~~~~~~~~~~~~-------~~~~V~~~~~~H~~p 153 (156)
++.++.++.+.+ ++++|+++++.| +|
T Consensus 70 ~~~~~~~~~~~i~~~~~~~g~~~v~~~~~~H-~~ 102 (336)
T 3zdk_A 70 IQALEVGESHVLPLDEIGQETMTVTLLDANH-CP 102 (336)
T ss_dssp EEECCTTSEEEEESSSSSSCEEEEEEEECSS-ST
T ss_pred eEecCCCCeEEecCcccccCCEEEEEEECCC-Cc
Confidence 456666666654 889999999999 44
No 69
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.72 E-value=9.1e-09 Score=79.97 Aligned_cols=65 Identities=9% Similarity=0.046 Sum_probs=47.6
Q ss_pred CcEEEEEECCeEEEEecCchHH--HH----HHHcCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCccc
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGTQ--RL----AHEHKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEGL 118 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~~--~~----l~~~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~~ 118 (156)
+|||+|..++..+|||+|.+.. +. +.+. .-.+|++|++||.|+||++|+..|.. ..+++|+.+..
T Consensus 75 ~N~ylv~~~~~~ilIDtg~~~~~~~~l~~~i~~~--~~~~I~~Ii~TH~H~DH~gg~~~l~~-------~~~~v~~~~~~ 145 (270)
T 4eyb_A 75 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQE--INLPVALAVVTHAHQDKMGGMDALHA-------AGIATYANALS 145 (270)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHH--TCCCEEEEEECSSSHHHHTTHHHHHH-------TTCEEEEEHHH
T ss_pred eEEEEEEECCEEEEEeCCCCHHHHHHHHHHHHHh--cCCceEEEEeCCCChhhcCcHHHHHH-------CCCeEEECHHH
Confidence 4799999999999999986532 22 2222 11368999999999999999987643 14678877655
No 70
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.58 E-value=2.7e-08 Score=86.60 Aligned_cols=75 Identities=12% Similarity=0.196 Sum_probs=51.6
Q ss_pred CCCcEEEEEECCeEEEEecCchHHH---HHHH--cCCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCcc
Q psy16255 43 GAPKSLYLFTDQSRYLFNCGEGTQR---LAHE--HKMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEG 117 (156)
Q Consensus 43 ~~~~s~~I~~~~~~iLiD~G~g~~~---~l~~--~~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~ 117 (156)
+..+|++|..++..+|||+|.+... .+.. .++...+|++|++||.|.||++|+..|...... .....+||+++.
T Consensus 121 ~~~N~ylI~~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~-~~~~a~V~a~~~ 199 (658)
T 2cfu_A 121 DLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQV-ASGAVQIIAPAG 199 (658)
T ss_dssp SSSCEEEEECSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHH-HTTSSEEEEETT
T ss_pred CCeEEEEEEECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhc-cCCCCEEEEchh
Confidence 3468999998788999999987531 1211 123456899999999999999999876421100 013478888876
Q ss_pred c
Q psy16255 118 L 118 (156)
Q Consensus 118 ~ 118 (156)
.
T Consensus 200 ~ 200 (658)
T 2cfu_A 200 F 200 (658)
T ss_dssp H
T ss_pred H
Confidence 3
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.86 E-value=1.7e-08 Score=87.97 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=50.2
Q ss_pred CCcEEEEEECCeEEEEecCchHH--HHHHH-c--CCCcCCcCeEEEcCCChhhhcChHHHHHHHhhCCCCceEEEcCcc
Q psy16255 44 APKSLYLFTDQSRYLFNCGEGTQ--RLAHE-H--KMKLAKLDSVFITQPVWENLGGLLGLALTIQDVGVPEINLHGPEG 117 (156)
Q Consensus 44 ~~~s~~I~~~~~~iLiD~G~g~~--~~l~~-~--~~~~~~i~~IfiTH~H~DHi~GL~~l~~~~~~~~~~~l~Iygp~~ 117 (156)
..+|++|..++..+|||+|.+.. +.+.+ . .+...+|++|++||.|.||++|+..+..... .....++||+++.
T Consensus 132 ~~N~~lI~~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~-~~~~~a~I~a~~~ 209 (668)
T 2yhe_A 132 PANMTIIEGDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEAD-VKAGKVKVFAPSG 209 (668)
Confidence 45799998878899999997652 22221 1 2335679999999999999999988764210 0112467777766
No 72
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=38.14 E-value=26 Score=26.83 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=17.0
Q ss_pred cEEEEEECCeEEEEecCchH
Q psy16255 46 KSLYLFTDQSRYLFNCGEGT 65 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g~ 65 (156)
-.++|..+++.||+|+|-|.
T Consensus 113 ~~l~V~idg~~ylvDVGFG~ 132 (278)
T 2bsz_A 113 MLLRVELDGRTYIADVGFGG 132 (278)
T ss_dssp EEEEEEETTEEEEECSCCSS
T ss_pred EEEEEEECCceEEEeCCCCc
Confidence 46778889999999999875
No 73
>3izc_q 60S ribosomal protein RPL41 (L41E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_q 3u5e_n 3u5i_n 4b6a_n
Probab=36.73 E-value=12 Score=17.97 Aligned_cols=14 Identities=43% Similarity=0.581 Sum_probs=9.9
Q ss_pred hhhHHHHHHHHhhh
Q psy16255 11 QNLKFQRVKMREKS 24 (156)
Q Consensus 11 ~~~~~~r~~~~~~~ 24 (156)
..+||.|.++++.|
T Consensus 11 rRlkrkRrkmrqrs 24 (25)
T 3izc_q 11 RRLKRKRRKVRARS 24 (26)
T ss_dssp HHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcc
Confidence 35678888877765
No 74
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=36.48 E-value=25 Score=27.25 Aligned_cols=20 Identities=25% Similarity=0.547 Sum_probs=16.9
Q ss_pred EEEEEECCeEEEEecCchHH
Q psy16255 47 SLYLFTDQSRYLFNCGEGTQ 66 (156)
Q Consensus 47 s~~I~~~~~~iLiD~G~g~~ 66 (156)
.++|+.+++.||+|+|-|..
T Consensus 135 ~l~V~idg~~ylvDVGFG~~ 154 (299)
T 1w4t_A 135 MLRLYLAEGEFLVDVGFGSA 154 (299)
T ss_dssp EEEEEETTEEEEECSCSGGG
T ss_pred EEEEEECCceEEEeCCCCCc
Confidence 57788899999999998863
No 75
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=35.96 E-value=24 Score=27.02 Aligned_cols=20 Identities=15% Similarity=0.371 Sum_probs=17.0
Q ss_pred cEEEEEECCeEEEEecCchH
Q psy16255 46 KSLYLFTDQSRYLFNCGEGT 65 (156)
Q Consensus 46 ~s~~I~~~~~~iLiD~G~g~ 65 (156)
-.++|..+++.||+|+|-|.
T Consensus 111 ~~l~V~idg~~ylvDVGFG~ 130 (284)
T 1e2t_A 111 RLLLVDVEDEQWIADVGFGG 130 (284)
T ss_dssp EEEEEEETTEEEEECSCSCT
T ss_pred EEEEEEECCceEEEecCCCc
Confidence 46778889999999999875
No 76
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=35.48 E-value=25 Score=27.07 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=17.9
Q ss_pred CcEEEEEECCeEEEEecCchHH
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGTQ 66 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~~ 66 (156)
.-.++|+.+++.||+|+|-|..
T Consensus 112 H~~l~V~idg~~ylvDVGFG~~ 133 (295)
T 2ija_A 112 HLLLQVTIDGRNYIVDAGSGRS 133 (295)
T ss_dssp EEEEEEEETTEEEEECSCCCGG
T ss_pred cEEEEEEECCceEEEeCCCCCc
Confidence 3467788899999999998853
No 77
>3iz5_q 60S ribosomal protein L41 (L41E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_q
Probab=35.17 E-value=12 Score=17.91 Aligned_cols=13 Identities=54% Similarity=0.700 Sum_probs=9.3
Q ss_pred hhHHHHHHHHhhh
Q psy16255 12 NLKFQRVKMREKS 24 (156)
Q Consensus 12 ~~~~~r~~~~~~~ 24 (156)
.+||.|.++++.|
T Consensus 12 RlkrkRrkmRqrs 24 (25)
T 3iz5_q 12 RLKRKRRKMRQRS 24 (26)
T ss_dssp HHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHcc
Confidence 4677787777765
No 78
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=33.64 E-value=29 Score=27.13 Aligned_cols=21 Identities=14% Similarity=0.360 Sum_probs=17.6
Q ss_pred CcEEEEEECCeEEEEecCchH
Q psy16255 45 PKSLYLFTDQSRYLFNCGEGT 65 (156)
Q Consensus 45 ~~s~~I~~~~~~iLiD~G~g~ 65 (156)
.-.++|+.+++.||+|+|-|.
T Consensus 138 H~~l~V~~~g~~ylvDVGFG~ 158 (309)
T 3lnb_A 138 HVIIILHHNKKDYVIDAGFAS 158 (309)
T ss_dssp EEEEEEEETTEEEEECSCSTT
T ss_pred cEEEEEEECCeEEEEecCCCC
Confidence 346778889999999999885
No 79
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=31.62 E-value=25 Score=23.16 Aligned_cols=21 Identities=19% Similarity=0.090 Sum_probs=13.5
Q ss_pred cCeEEEcCCChhhhcChHHHH
Q psy16255 79 LDSVFITQPVWENLGGLLGLA 99 (156)
Q Consensus 79 i~~IfiTH~H~DHi~GL~~l~ 99 (156)
...|||||.+.|...-|-.++
T Consensus 4 ~~~lFISh~~~d~~~~L~~~l 24 (111)
T 1eiw_A 4 EIRLYITEGEVEDYRVFLERL 24 (111)
T ss_dssp CEEEEECCCCSHHHHHHHHHH
T ss_pred eEEEEEecccHhHHHHHHHHH
Confidence 346999999999333333333
No 80
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=23.35 E-value=40 Score=25.71 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=17.1
Q ss_pred cEEEEEECCeE--EEEecCchHH
Q psy16255 46 KSLYLFTDQSR--YLFNCGEGTQ 66 (156)
Q Consensus 46 ~s~~I~~~~~~--iLiD~G~g~~ 66 (156)
-.++|..+++. ||+|+|-|..
T Consensus 111 ~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 111 TVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp EEEEEECTTCSSCEEECSCSGGG
T ss_pred EEEEEEECCeEEEEEEecCCCcc
Confidence 45777888888 9999998863
No 81
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=22.50 E-value=39 Score=25.72 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=15.9
Q ss_pred EEEEEECCeE--EEEecCchH
Q psy16255 47 SLYLFTDQSR--YLFNCGEGT 65 (156)
Q Consensus 47 s~~I~~~~~~--iLiD~G~g~ 65 (156)
.++|..+++. ||+|+|-|.
T Consensus 115 ~l~V~idg~~~~ylvDVGFG~ 135 (278)
T 1w5r_A 115 VLSVAVPGADGRYLVDVGFGG 135 (278)
T ss_dssp EEEEECSSCSCCEEECSCSCT
T ss_pred EEEEEECCeEEEEEEecCCCc
Confidence 5677888888 999999875
No 82
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=21.07 E-value=39 Score=25.98 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=15.7
Q ss_pred cEEEE-EEC-CeEEEEecCch
Q psy16255 46 KSLYL-FTD-QSRYLFNCGEG 64 (156)
Q Consensus 46 ~s~~I-~~~-~~~iLiD~G~g 64 (156)
-.++| +.+ ++.||+|+|-|
T Consensus 120 ~~l~V~~l~dg~~ylvDVGFG 140 (293)
T 3d9w_A 120 ALLRVTTADDDRVWMCDVGFG 140 (293)
T ss_dssp EEEEEECSSCSCEEEECCSSS
T ss_pred EEEEEEEcCCCCeEEEecCCC
Confidence 36677 677 88999999988
Done!