Query psy16256
Match_columns 74
No_of_seqs 128 out of 1035
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 16:46:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1e_A Alpha-crystallin A chai 99.9 3.6E-23 1.2E-27 125.4 10.8 74 1-74 28-106 (106)
2 2klr_A Alpha-crystallin B chai 99.9 1.6E-21 5.4E-26 127.4 9.6 73 2-74 90-163 (175)
3 2wj5_A Heat shock protein beta 99.9 3.9E-21 1.3E-25 115.5 10.1 70 2-72 28-98 (101)
4 3q9p_A Heat shock protein beta 99.8 2E-20 6.8E-25 109.4 7.7 61 2-62 24-85 (85)
5 2y1y_A Alpha-crystallin B chai 99.8 8.4E-20 2.9E-24 107.5 9.7 62 2-63 23-85 (90)
6 4eld_A MJ16.5-P1, small heat s 99.8 5.6E-19 1.9E-23 113.1 5.7 70 2-73 83-161 (161)
7 4fei_A Heat shock protein-rela 99.7 3.3E-17 1.1E-21 98.1 10.1 62 1-63 32-96 (102)
8 3aab_A Putative uncharacterize 99.7 1.1E-17 3.9E-22 102.9 7.1 68 1-73 50-123 (123)
9 3gla_A Low molecular weight he 99.7 4.8E-17 1.7E-21 96.6 9.3 62 1-63 30-99 (100)
10 1gme_A Heat shock protein 16.9 99.7 1.1E-17 3.7E-22 106.6 6.3 71 2-73 70-150 (151)
11 2bol_A TSP36, small heat shock 99.7 1.4E-17 4.7E-22 116.8 5.6 62 2-63 129-190 (314)
12 2bol_A TSP36, small heat shock 99.7 5.6E-17 1.9E-21 113.8 5.2 59 2-61 251-313 (314)
13 1rl1_A Suppressor of G2 allele 97.4 0.00021 7.3E-09 42.4 4.5 53 3-63 37-89 (114)
14 2xcm_C SGT1-like protein, cyto 97.3 0.00012 4E-09 41.8 2.6 53 3-63 30-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 95.7 0.012 4.2E-07 36.7 4.0 62 2-63 7-83 (134)
16 3eud_A Protein SHQ1; CS domain 95.3 0.028 9.5E-07 34.3 4.4 62 2-63 21-97 (115)
17 3q9p_A Heat shock protein beta 90.9 0.5 1.7E-05 26.4 4.6 33 28-62 8-40 (85)
18 2y1y_A Alpha-crystallin B chai 89.7 0.46 1.6E-05 26.7 3.7 32 28-61 7-38 (90)
19 4fei_A Heat shock protein-rela 89.4 0.69 2.4E-05 26.5 4.4 33 28-62 17-49 (102)
20 2wj5_A Heat shock protein beta 89.3 0.5 1.7E-05 27.2 3.7 33 28-62 12-44 (101)
21 3gla_A Low molecular weight he 89.2 0.8 2.7E-05 25.9 4.6 33 28-62 15-47 (100)
22 3l1e_A Alpha-crystallin A chai 88.5 0.81 2.8E-05 26.5 4.3 32 28-61 13-44 (106)
23 3aab_A Putative uncharacterize 86.5 1.7 5.9E-05 25.6 5.0 34 28-63 35-69 (123)
24 3igf_A ALL4481 protein; two-do 83.1 1.7 5.7E-05 30.6 4.4 32 27-59 335-367 (374)
25 2klr_A Alpha-crystallin B chai 81.4 2 6.9E-05 27.2 4.0 33 28-62 74-106 (175)
26 1gme_A Heat shock protein 16.9 81.0 3.6 0.00012 25.2 5.0 35 28-63 54-88 (151)
27 1q5l_A Chaperone protein DNAK; 77.0 3.5 0.00012 24.8 3.9 35 38-73 96-130 (135)
28 2o30_A Nuclear movement protei 76.2 3.6 0.00012 24.5 3.8 30 28-58 15-44 (131)
29 4eld_A MJ16.5-P1, small heat s 75.0 6.9 0.00024 23.9 5.0 33 28-62 67-99 (161)
30 1ejf_A Progesterone receptor P 72.6 10 0.00035 22.3 5.1 54 3-63 29-82 (125)
31 3h0x_A 78 kDa glucose-regulate 72.0 5.2 0.00018 24.5 3.8 36 37-73 78-113 (152)
32 2cg9_X CO-chaperone protein SB 71.7 5.9 0.0002 23.8 4.0 58 3-62 39-97 (134)
33 2op6_A Heat shock 70 kDa prote 71.5 5.1 0.00018 24.2 3.7 35 38-73 79-113 (152)
34 3dqg_A Heat shock 70 kDa prote 71.2 5.5 0.00019 24.5 3.8 36 37-73 78-113 (151)
35 3dob_A Heat shock 70 kDa prote 70.6 5.7 0.0002 24.4 3.8 37 36-73 77-113 (152)
36 1x5m_A Calcyclin-binding prote 70.0 14 0.00048 21.7 5.4 34 29-63 70-104 (127)
37 1wgv_A KIAA1068 protein; CS do 69.2 7 0.00024 23.0 3.9 30 28-58 30-60 (124)
38 3n8e_A Stress-70 protein, mito 66.2 6.9 0.00024 24.8 3.6 36 37-73 98-133 (182)
39 2rh0_A NUDC domain-containing 64.9 9.3 0.00032 23.6 3.9 30 28-58 24-53 (157)
40 3oeq_A Frataxin homolog, mitoc 62.5 8 0.00027 23.4 3.2 17 43-60 48-64 (123)
41 1ew4_A CYAY protein; friedreic 62.5 5 0.00017 23.6 2.2 18 42-60 28-45 (106)
42 4e81_A Chaperone protein DNAK; 61.8 8.7 0.0003 24.9 3.5 36 37-73 79-114 (219)
43 3qor_A Nuclear migration prote 58.8 9.4 0.00032 22.4 3.0 30 32-62 66-96 (121)
44 1wfi_A Nuclear distribution ge 58.7 14 0.00048 21.8 3.8 29 29-58 19-49 (131)
45 2nwt_A UPF0165 protein AF_2212 57.8 8.5 0.00029 21.2 2.5 19 42-61 3-21 (69)
46 3qor_A Nuclear migration prote 56.8 12 0.00042 21.9 3.3 32 28-60 27-60 (121)
47 1u00_A HSC66, chaperone protei 54.0 14 0.00048 23.9 3.5 30 43-73 82-111 (227)
48 2kmw_A Uncharacterized protein 51.4 32 0.0011 21.0 4.7 34 28-63 49-82 (150)
49 1nvp_C Transcription initiatio 48.9 6.2 0.00021 22.2 1.0 16 41-57 46-61 (76)
50 2dng_A Eukaryotic translation 47.3 2.9 9.8E-05 23.1 -0.6 29 34-62 22-50 (103)
51 3t3l_A Frataxin, mitochondrial 46.9 15 0.0005 22.3 2.5 17 42-59 40-56 (129)
52 4h09_A Hypothetical leucine ri 44.9 14 0.00049 24.5 2.5 17 42-58 10-26 (379)
53 1of5_A MRNA export factor MEX6 43.7 40 0.0014 22.1 4.5 33 25-62 174-206 (221)
54 4gx7_A Cytolysin and hemolysin 43.2 45 0.0015 20.9 4.4 29 24-54 115-143 (152)
55 1q40_B MEX67, mRNA export fact 43.1 29 0.001 22.7 3.7 34 25-62 179-212 (219)
56 1nh2_C Transcription initiatio 41.9 9.2 0.00032 21.6 1.0 16 41-57 48-63 (79)
57 2kxo_A Cell division topologic 41.4 22 0.00077 20.4 2.6 26 38-63 56-84 (95)
58 1wi8_A EIF-4B, eukaryotic tran 41.3 2.8 9.6E-05 23.2 -1.3 29 34-62 22-50 (104)
59 2j76_E EIF-4B, EIF4B, eukaryot 40.7 5.2 0.00018 22.0 -0.2 29 34-62 26-54 (100)
60 1jkg_B TAP; NTF2-like domain, 40.5 35 0.0012 22.4 3.9 48 9-60 123-171 (250)
61 3iln_A Laminarinase; jelly ROW 38.0 72 0.0024 20.6 5.0 36 3-38 49-97 (251)
62 2wkd_A ORF34P2; SSB, single-st 37.4 65 0.0022 19.2 4.3 31 7-38 57-92 (119)
63 3i4i_A 1,3-1,4-beta-glucanase; 37.3 79 0.0027 20.5 5.2 35 3-37 57-103 (234)
64 2kwv_A RAD30 homolog B, DNA po 35.8 12 0.00039 19.2 0.7 10 34-43 11-20 (48)
65 2gjh_A Designed protein; oblig 35.5 32 0.0011 17.9 2.4 17 2-18 36-52 (62)
66 3j21_F 50S ribosomal protein L 35.3 51 0.0017 21.0 3.9 26 29-60 7-32 (184)
67 1wez_A HnRNP H', FTP-3, hetero 33.0 3.5 0.00012 23.1 -1.8 29 34-62 22-50 (102)
68 2v7y_A Chaperone protein DNAK; 32.5 45 0.0015 23.7 3.6 35 38-73 437-471 (509)
69 3c8l_A FTSZ-like protein of un 31.6 3.5 0.00012 25.1 -2.0 30 29-59 58-87 (122)
70 1vq8_E 50S ribosomal protein L 31.5 71 0.0024 20.2 4.1 25 30-60 3-27 (178)
71 1ujs_A Actin-binding LIM prote 31.3 7.8 0.00027 22.3 -0.5 16 34-49 34-49 (88)
72 1wh0_A Ubiquitin carboxyl-term 31.3 46 0.0016 19.9 3.0 35 28-63 78-112 (134)
73 2ayh_A 1,3-1,4-beta-D-glucan 4 30.3 1E+02 0.0035 19.2 4.9 35 3-37 39-83 (214)
74 2uwa_A Cellulase; glycoside hy 29.9 93 0.0032 20.7 4.6 36 3-38 35-74 (274)
75 4b9q_A Chaperone protein DNAK; 29.8 34 0.0012 25.1 2.6 36 36-72 466-501 (605)
76 2kho_A Heat shock protein 70; 29.8 52 0.0018 24.1 3.6 35 38-73 468-502 (605)
77 2cql_A OK/SW-CL.103, 60S ribos 29.5 42 0.0014 19.2 2.5 25 30-60 14-38 (100)
78 1yuw_A Heat shock cognate 71 k 27.9 63 0.0021 23.4 3.7 35 38-73 470-504 (554)
79 1o4z_A Beta-agarase B; glycosi 26.4 90 0.0031 21.5 4.1 36 3-38 107-153 (346)
80 2lu2_A H4, putative, microneme 25.9 56 0.0019 19.8 2.6 19 44-62 92-110 (138)
81 1yu8_X Villin; alpha helix, 3- 25.3 7.9 0.00027 21.1 -1.1 15 34-48 19-33 (67)
82 2kgs_A Uncharacterized protein 25.1 46 0.0016 19.7 2.2 16 2-17 80-95 (132)
83 2exn_A Hypothetical protein BO 24.4 49 0.0017 19.6 2.3 20 41-61 45-64 (136)
84 2c3v_A Alpha-amylase G-6; carb 23.6 58 0.002 18.8 2.4 20 29-52 51-70 (102)
85 1qzp_A Dematin; villin headpie 23.0 6.5 0.00022 21.4 -1.8 16 33-48 19-34 (68)
86 4fxv_A ELAV-like protein 1; RN 22.2 11 0.00036 20.9 -1.0 29 34-62 26-55 (99)
87 3o5s_A Beta-glucanase; glycosy 22.2 1.7E+02 0.0057 18.9 4.8 35 3-37 63-107 (238)
88 2k6m_S Supervillin; SVHP, HP, 21.8 25 0.00085 19.0 0.5 15 34-48 19-33 (67)
89 3uux_B Mitochondrial division 21.0 13 0.00043 25.2 -1.0 23 27-49 128-150 (242)
90 2e0g_A Chromosomal replication 20.6 93 0.0032 17.3 2.8 16 44-60 28-43 (107)
91 1rm1_C Transcription initiatio 20.5 25 0.00087 24.2 0.4 16 41-57 255-270 (286)
92 4atf_A Beta-agarase B; hydrola 20.5 63 0.0022 22.1 2.4 15 3-17 76-90 (308)
93 2qiy_A UBP3-associated protein 20.5 1E+02 0.0035 18.5 3.2 25 10-37 106-130 (154)
94 3nv0_A Nuclear RNA export fact 20.4 78 0.0027 20.3 2.7 48 9-60 133-186 (205)
95 2hgn_A Heterogeneous nuclear r 20.2 6.6 0.00023 23.6 -2.4 29 34-62 53-81 (139)
96 1dyp_A Kappa-carrageenase; hyd 20.1 1.1E+02 0.0038 19.8 3.5 16 3-18 48-63 (271)
No 1
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.90 E-value=3.6e-23 Score=125.43 Aligned_cols=74 Identities=32% Similarity=0.609 Sum_probs=64.9
Q ss_pred CeEEEECCEEEEEEEEEeecCC-CeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCCC----CCCeEEeccC
Q psy16256 1 MLFGSPNDFPIVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALG----APEKLIPIAH 74 (74)
Q Consensus 1 ~~~~v~~~~L~I~g~~~~~~~~-~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~~----~~~r~I~I~~ 74 (74)
+.|++++|.|+|+|+++...++ +|.+++|.|+|.||.+||.++|+|+|++||+|+|++||.++. .++|.|||++
T Consensus 28 i~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 28 LTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp EEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred EEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEccCcccccCCCCeEeeecC
Confidence 3689999999999998765543 688899999999999999999999997799999999998764 3789999974
No 2
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.86 E-value=1.6e-21 Score=127.41 Aligned_cols=73 Identities=41% Similarity=0.658 Sum_probs=54.7
Q ss_pred eEEEECCEEEEEEEEEeecC-CCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEeccC
Q psy16256 2 LFGSPNDFPIVHAKHEEKSD-SKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIAH 74 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~~-~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~~ 74 (74)
.|++++|.|+|+|+++++.+ .+|.+++|.|+|.||++||.++|+|+|++||+|+|++||.+....+|+|+|++
T Consensus 90 ~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 90 KVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp EEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEEEEECC-------------
T ss_pred EEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEEEEECCCCCCCCeEEEEec
Confidence 68999999999999976544 46889999999999999999999999966999999999987533469999963
No 3
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.86 E-value=3.9e-21 Score=115.51 Aligned_cols=70 Identities=33% Similarity=0.539 Sum_probs=58.9
Q ss_pred eEEEECCEEEEEEEEEeecCC-CeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEec
Q psy16256 2 LFGSPNDFPIVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPI 72 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~~~-~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I 72 (74)
.|++++|.|+|+|+++...++ +|..++|.|+|.||.+||.+.|+|+|++||+|+|++||.+. .+++.++|
T Consensus 28 ~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~~-~~~~~~~i 98 (101)
T 2wj5_A 28 SVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQATPASA-QASLPSPP 98 (101)
T ss_dssp EEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEEEECBCCC-CCSSCC--
T ss_pred EEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEEEEECCCc-CCCCCCcc
Confidence 588999999999999765443 68889999999999999999999999669999999999875 34555554
No 4
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.83 E-value=2e-20 Score=109.39 Aligned_cols=61 Identities=34% Similarity=0.629 Sum_probs=50.8
Q ss_pred eEEEECCEEEEEEEEEeecC-CCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 2 LFGSPNDFPIVHAKHEEKSD-SKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~~-~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|++++|.|+|+|+++...+ .+|.+++|.|+|.||++||.++|+|+|.+||+|+|++||+.
T Consensus 24 ~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 24 TVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPK 85 (85)
T ss_dssp EEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEECCC
T ss_pred EEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEEcCC
Confidence 58999999999999875543 35778999999999999999999999944999999999963
No 5
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.82 E-value=8.4e-20 Score=107.51 Aligned_cols=62 Identities=39% Similarity=0.605 Sum_probs=54.4
Q ss_pred eEEEECCEEEEEEEEEeecC-CCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 2 LFGSPNDFPIVHAKHEEKSD-SKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~~-~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
.|++++|.|+|+|+++...+ .+|.+++|.|+|.||.+||.+.|+|+|++||+|+|++||...
T Consensus 23 ~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~~~ 85 (90)
T 2y1y_A 23 KVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPRKQV 85 (90)
T ss_dssp EEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECBC--
T ss_pred EEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEcCCC
Confidence 68899999999999876544 368889999999999999999999999669999999999875
No 6
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.76 E-value=5.6e-19 Score=113.14 Aligned_cols=70 Identities=23% Similarity=0.268 Sum_probs=58.8
Q ss_pred eEEEECCEEEEEEEEEeec---CCCe------EEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEec
Q psy16256 2 LFGSPNDFPIVHAKHEEKS---DSKS------VYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPI 72 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~---~~~~------~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I 72 (74)
.|++++|.|+|+|+++... +++| .+++|.|+|.||.+||.+.|+|+| +||+|+|++||.+. .++|+|+|
T Consensus 83 ~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~-~nGvL~I~lpK~~~-~~~r~I~I 160 (161)
T 4eld_A 83 ILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF-ENGVLSVILPKAES-SIKKGINI 160 (161)
T ss_dssp EEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-ETTEEEEEEEBCGG-GSCCCCCC
T ss_pred EEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE-ECCEEEEEEEcCCC-CCCcEeec
Confidence 5899999999999986532 2223 234899999999999999999999 89999999999874 46899998
Q ss_pred c
Q psy16256 73 A 73 (74)
Q Consensus 73 ~ 73 (74)
+
T Consensus 161 e 161 (161)
T 4eld_A 161 E 161 (161)
T ss_dssp C
T ss_pred C
Confidence 6
No 7
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.73 E-value=3.3e-17 Score=98.13 Aligned_cols=62 Identities=21% Similarity=0.219 Sum_probs=52.7
Q ss_pred CeEEEECCEEEEEEEEEeecCC---CeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 1 MLFGSPNDFPIVHAKHEEKSDS---KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 1 ~~~~v~~~~L~I~g~~~~~~~~---~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
+.|++++|.|+|+|+++..... ...+++|.|+|.||.+||.+.++|+| +||+|+|++||.++
T Consensus 32 i~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 32 LALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL-AGGVLTVRFEKLRP 96 (102)
T ss_dssp CEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ETTEEEEEEEBSSC
T ss_pred EEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE-ECCEEEEEEEccCc
Confidence 4689999999999998542211 13567999999999999999999999 89999999999875
No 8
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.72 E-value=1.1e-17 Score=102.95 Aligned_cols=68 Identities=15% Similarity=0.208 Sum_probs=56.3
Q ss_pred CeEEEEC-CEEEEEEEEEeecCCCeEEE----EEEEEEECCCCCCcCCc-EEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 1 MLFGSPN-DFPIVHAKHEEKSDSKSVYR----EYNREFLLPKGTNPESI-KSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 1 ~~~~v~~-~~L~I~g~~~~~~~~~~~~r----~f~R~~~LP~~vd~~~i-~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
+.|++++ |.|+|+|++....+.+|..+ +|.|+|.||.+||.++| +|+| +||+|+|++||.+.. + |+|+
T Consensus 50 i~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~-~~GvL~I~lPK~~~~---~-I~Ie 123 (123)
T 3aab_A 50 IKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY-ENGVLTIRIPIAGTS---V-FKFE 123 (123)
T ss_dssp CEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEE-ETTEEEEEEEGGGEE---C-SCCC
T ss_pred EEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE-cCCEEEEEEEcCCCC---c-cccC
Confidence 4688999 99999999865443345443 89999999999999999 9999 899999999998742 2 7774
No 9
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.72 E-value=4.8e-17 Score=96.61 Aligned_cols=62 Identities=18% Similarity=0.404 Sum_probs=51.3
Q ss_pred CeEEEECCEEEEEEEEEeecC-C--CeE-----EEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 1 MLFGSPNDFPIVHAKHEEKSD-S--KSV-----YREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 1 ~~~~v~~~~L~I~g~~~~~~~-~--~~~-----~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
+.|++++|.|+|+|++..... + +|. ++.|.|+|.||.+||.+.|+|+| +||+|+|++||.+.
T Consensus 30 i~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~-~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 30 IEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG-RNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE-ETTEEEEEEEBC--
T ss_pred EEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE-eCCEEEEEEecCCC
Confidence 468999999999999865432 1 343 35899999999999999999999 89999999999864
No 10
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.72 E-value=1.1e-17 Score=106.58 Aligned_cols=71 Identities=24% Similarity=0.360 Sum_probs=57.8
Q ss_pred eEEE-ECCEEEEEEEEEeecC--C-CeE-----EEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCCC-CCCeEEe
Q psy16256 2 LFGS-PNDFPIVHAKHEEKSD--S-KSV-----YREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALG-APEKLIP 71 (74)
Q Consensus 2 ~~~v-~~~~L~I~g~~~~~~~--~-~~~-----~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~~-~~~r~I~ 71 (74)
.|++ +++.|+|+|++....+ + +|. +++|.|+|.||.+||.+.|+|+| +||+|+|++||.... .+.|+|+
T Consensus 70 ~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~nGvL~I~lPK~~~~~~~~~~I~ 148 (151)
T 1gme_A 70 KVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL-ENGVLTVTVPKAEVKKPEVKAIQ 148 (151)
T ss_dssp EEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEE-ETTEEEEEEECCCCCTTCCCCCC
T ss_pred EEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEE-ECCEEEEEEEccCcCCCCCeEee
Confidence 5788 4689999999865432 2 343 35799999999999999999999 899999999998753 3568898
Q ss_pred cc
Q psy16256 72 IA 73 (74)
Q Consensus 72 I~ 73 (74)
|+
T Consensus 149 I~ 150 (151)
T 1gme_A 149 IS 150 (151)
T ss_dssp CC
T ss_pred eC
Confidence 86
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.70 E-value=1.4e-17 Score=116.84 Aligned_cols=62 Identities=19% Similarity=0.345 Sum_probs=55.2
Q ss_pred eEEEECCEEEEEEEEEeecCCCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 2 LFGSPNDFPIVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~~~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
.|++++|.|+|+|+++...++++.+++|.|+|.||++||.++|+|+|..||+|+|++||.++
T Consensus 129 ~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGVL~I~lPK~~~ 190 (314)
T 2bol_A 129 TIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTDDVLVIEAPVNEP 190 (314)
T ss_dssp EEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSSSEEEEEEEBSSC
T ss_pred EEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCCCEEEEEEeccCc
Confidence 58999999999999875555567889999999999999999999999339999999999875
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.66 E-value=5.6e-17 Score=113.77 Aligned_cols=59 Identities=24% Similarity=0.389 Sum_probs=48.3
Q ss_pred eEEEECCEEEEEEEEEeecCC----CeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCC
Q psy16256 2 LFGSPNDFPIVHAKHEEKSDS----KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 61 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~~~~~----~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~ 61 (74)
.|++++|.|+|+|+++.+.+. .+.+++|+|+|.||++||.++|+|+| +||||+|++||.
T Consensus 251 ~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~dGvL~i~~Pk~ 313 (314)
T 2bol_A 251 KVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEI-VDGLMVVEAPLF 313 (314)
T ss_dssp EEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEE-ETTEEEEEEEEE
T ss_pred EEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEE-eCCEEEEEEecC
Confidence 588999999999998765433 25678999999999999999999999 799999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.43 E-value=0.00021 Score=42.39 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=40.0
Q ss_pred EEEECCEEEEEEEEEeecCCCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~~~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
|++.++.|.|++... + + ..|...+.|+..||++..++++ .+|.|+|+++|.+.
T Consensus 37 v~~~~~~l~v~~~~~---~-~---~~y~~~~~L~~~I~~e~s~~~~-~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 37 VEFSEKELSALVKLP---S-G---EDYNLKLELLHPIIPEQSTFKV-LSTKIEIKLKKPEA 89 (114)
T ss_dssp EECSSSCEEEEEECT---T-S---SEEEEEECBSSCCCGGGEEEEE-CSSSEEEEEECSSC
T ss_pred EEEEcCEEEEEEEeC---C-C---cEEEEEeeCCCcCCccccEEEE-ECCEEEEEEEcCCC
Confidence 444555555555321 1 1 2688899999999999999999 78999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=97.35 E-value=0.00012 Score=41.77 Aligned_cols=53 Identities=9% Similarity=0.009 Sum_probs=40.1
Q ss_pred EEEECCEEEEEEEEEeecCCCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~~~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
|++.++.|.|++... + + ..|...+.|+..||++..++++ .+|.|.|+++|.++
T Consensus 30 v~~~~~~l~v~~~~~---~-~---~~y~~~~~L~~~I~~~~s~~~~-~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 30 IDFGEQILSVVIEVP---G-E---DAYYLQPRLFGKIIPDKCKYEV-LSTKIEICLAKADI 82 (92)
T ss_dssp EEECSSBEEEEECCT---T-S---CCEEECCBBSSCBCGGGCEEEE-CSSCEEEEEEBSSS
T ss_pred EEEECCEEEEEEEcC---C-C---cEEEEeeEcCCccCchhEEEEE-ECCEEEEEEEcCCC
Confidence 455555666655321 1 1 2578889999999999999999 79999999999864
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.012 Score=36.66 Aligned_cols=62 Identities=10% Similarity=0.163 Sum_probs=42.5
Q ss_pred eEEEECCEEEEEEEEE--e--ecC------C-CeEEE--EEEEEEECCCCC-CcCCcEEEeCC-CCEEEEEEeCCCC
Q psy16256 2 LFGSPNDFPIVHAKHE--E--KSD------S-KSVYR--EYNREFLLPKGT-NPESIKSSLSK-DGVLTVEAPLPAL 63 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~--~--~~~------~-~~~~r--~f~R~~~LP~~v-d~~~i~A~l~~-dGvL~I~~Pk~~~ 63 (74)
.++-++..|.|.-+-. . .++ + -|..+ -|.=++.||..| |.+.-+|+|+. +|.|+|++||..+
T Consensus 7 ~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 7 SITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLSPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNK 83 (134)
T ss_dssp EEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSSSSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESST
T ss_pred EEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecCCeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCCC
Confidence 3566777777776532 1 111 1 12222 234459999999 99999999973 7999999999764
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.028 Score=34.29 Aligned_cols=62 Identities=11% Similarity=0.180 Sum_probs=41.8
Q ss_pred eEEEECCEEEEEEEEEe----ecCC-----C--eEE--EEEEEEEECCCCC-CcCCcEEEeC-CCCEEEEEEeCCCC
Q psy16256 2 LFGSPNDFPIVHAKHEE----KSDS-----K--SVY--REYNREFLLPKGT-NPESIKSSLS-KDGVLTVEAPLPAL 63 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~----~~~~-----~--~~~--r~f~R~~~LP~~v-d~~~i~A~l~-~dGvL~I~~Pk~~~ 63 (74)
.++-+++.|.|.-+-.. .++- + |.. .-|.=++.||..| |.+.-+|+|+ ++|.++|++||..+
T Consensus 21 ~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~ 97 (115)
T 3eud_A 21 SITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLSPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNK 97 (115)
T ss_dssp EEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEETTEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESST
T ss_pred EEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecCCeEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCcC
Confidence 35667777777765321 1111 1 222 2244469999998 7788899996 57999999999875
No 17
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=90.92 E-value=0.5 Score=26.36 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=28.1
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|.=.+.|| ++++++|+-.+ .+|.|+|++-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKT-KDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEE-ETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcc
Confidence 466778996 89999999999 7999999998764
No 18
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=89.73 E-value=0.46 Score=26.72 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=27.4
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 61 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~ 61 (74)
.|.=.+.|| +++.++|+-.+ .+|.|+|++-+.
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~ 38 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHE 38 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEe
Confidence 356678897 99999999999 799999999764
No 19
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=89.35 E-value=0.69 Score=26.50 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=28.6
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|.=.+.|| +++.++|+-.+ .+|.|+|++-+..
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~ 49 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAE-DGGQLTVSGERPG 49 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEE-ETTEEEEEEEECC
T ss_pred EEEEEEECC-CCchHhEEEEE-ECCEEEEEEEEec
Confidence 577788997 89999999999 7999999987643
No 20
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=89.29 E-value=0.5 Score=27.21 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=28.1
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|.=.+.|| ++++++|+-.+ .+|.|+|++-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKV-VGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 355678997 99999999999 7999999998754
No 21
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=89.23 E-value=0.8 Score=25.90 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=28.4
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|.=.+.|| +++.++|+-.+ .+|.|+|++-+..
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~ 47 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQM-DKGILSIRGERKS 47 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEE-ETTEEEEEEEECC
T ss_pred EEEEEEECC-CCCHHHEEEEE-ECCEEEEEEEEcC
Confidence 466678997 79999999999 7999999987764
No 22
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=88.51 E-value=0.81 Score=26.55 Aligned_cols=32 Identities=6% Similarity=0.174 Sum_probs=27.8
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 61 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~ 61 (74)
.|.=.+.|| ++++++|+-.+ .+|.|+|++-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKV-QEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEc
Confidence 577788996 89999999999 799999999653
No 23
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=86.46 E-value=1.7 Score=25.56 Aligned_cols=34 Identities=26% Similarity=0.162 Sum_probs=29.5
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCC-CEEEEEEeCCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKD-GVLTVEAPLPAL 63 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~d-GvL~I~~Pk~~~ 63 (74)
.|.=.+.|| +++.++|+-.+ .+ |.|+|++-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v-~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARV-SGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEE-ETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEE-eCCCEEEEEEEEecc
Confidence 577788997 79999999999 67 999999997653
No 24
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=83.14 E-value=1.7 Score=30.60 Aligned_cols=32 Identities=13% Similarity=0.270 Sum_probs=26.7
Q ss_pred EEEEEEEECCCCCCcCC-cEEEeCCCCEEEEEEe
Q psy16256 27 REYNREFLLPKGTNPES-IKSSLSKDGVLTVEAP 59 (74)
Q Consensus 27 r~f~R~~~LP~~vd~~~-i~A~l~~dGvL~I~~P 59 (74)
+.|+|.+.||...-.-. ..|.| +||.|.|+.-
T Consensus 335 g~~rR~i~LP~~L~~~~v~~A~~-~~~~L~i~~~ 367 (374)
T 3igf_A 335 GDQRRNIFLPPALSGRPITGAKF-QNNYLIISFL 367 (374)
T ss_dssp TTEEEEEECCTTTTTCCEEEEEE-ETTEEEEEEC
T ss_pred CCEeecccCCHHHcCCCccccEE-ECCEEEEEEe
Confidence 46999999999877664 56899 8999999874
No 25
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=81.42 E-value=2 Score=27.23 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=28.9
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|.=.+.|| ++++++|+-++ .+|.|+|++-+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcc
Confidence 688889996 99999999999 7999999997643
No 26
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=80.99 E-value=3.6 Score=25.15 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=29.3
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
.|.=.+.|| +++.++|+-.+.+++.|+|++-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 577789997 89999999999445799999987653
No 27
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=76.98 E-value=3.5 Score=24.85 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=22.8
Q ss_pred CCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 38 GTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 38 ~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
+...=.++-.++.||+|.|++--... .+...|.|+
T Consensus 96 G~~~IeVtf~iD~nGiL~V~a~d~~t-g~~~~i~i~ 130 (135)
T 1q5l_A 96 GMPQIEVTFDIDADGILHVSAKDKNS-GKEQKITIK 130 (135)
T ss_dssp SSCCEEEEEEECTTSEEEEEEEETTT-CCEEEEEEE
T ss_pred ceeEEEEEEEECCCCEEEEEEEECCC-CCEEEEEEe
Confidence 44334467788899999999964432 345566653
No 28
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=76.21 E-value=3.6 Score=24.52 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=18.5
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEE
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEA 58 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~ 58 (74)
+..=+|.||.+++.+++.+.+ ...-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i-~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRM-VGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEE-ETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEE-ECCEEEEEE
Confidence 344567777778888888887 466666665
No 29
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=74.95 E-value=6.9 Score=23.95 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=29.3
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.|.=.+.|| +++.++|+-.+ .+|.|+|++-+..
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~-~~~~L~I~g~~~~ 99 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNA-VGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEE-ETTEEEEEEECCC
T ss_pred EEEEEEECC-CCChHhEEEEE-ECCEEEEEEEEcc
Confidence 677889995 79999999999 7999999998876
No 30
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=72.63 E-value=10 Score=22.31 Aligned_cols=54 Identities=9% Similarity=-0.077 Sum_probs=39.4
Q ss_pred EEEECCEEEEEEEEEeecCCCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~~~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
|++..+.|.+++.- ..++ ..|.-.+.|-..|+++.-+.++ .++.+.|+|.|..+
T Consensus 29 V~~~~~~l~~~~~~---~~~~---~~y~~~l~L~~~I~~e~S~~~v-~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 29 VNFEKSKLTFSCLG---GSDN---FKHLNEIDLFHCIDPNDSKHKR-TDRSILCCLRKGES 82 (125)
T ss_dssp EEEETTEEEEEEEE---TTTT---EEEEEEEEBSSCEEEEEEEEEE-CSSCEEEEEEESST
T ss_pred EEEECCEEEEEEEe---CCCC---ceEEEEEEccceeccccCEEEE-CCCEEEEEEEECCC
Confidence 56666777766642 0112 2466778899999999999999 57889999999863
No 31
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=71.98 E-value=5.2 Score=24.54 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=23.7
Q ss_pred CCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 37 KGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 37 ~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
.+.-.=.|+-.++.||+|+|++--... .+...|.|.
T Consensus 78 ~G~~~I~Vtf~iD~nGiL~V~a~d~~t-g~~~~i~I~ 113 (152)
T 3h0x_A 78 RGVPQIEVTFALDANGILKVSATDKGT-GKSESITIT 113 (152)
T ss_dssp TTCSCEEEEEEECTTSEEEEEEEETTT-CCEEEEEEE
T ss_pred CCCceEEEEEEEcCCCEEEEEEEEcCC-CcEeEEEEe
Confidence 344334577788999999999975442 345566653
No 32
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=71.68 E-value=5.9 Score=23.79 Aligned_cols=58 Identities=12% Similarity=0.104 Sum_probs=37.6
Q ss_pred EEEECCEEEEEEEEEeecCCCeEEEEEEEEEECCCCCCcCCcEEEeCCCCE-EEEEEeCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGV-LTVEAPLPA 62 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~~~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGv-L~I~~Pk~~ 62 (74)
|.+..+.|.+++......+ +.-...|.-.+.|...||++.-+.++ .++. +.|+|.|..
T Consensus 39 V~~~~~~l~~~~~~~~~~g-~~~~~~y~~~l~L~~~Idpe~S~~~v-~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 39 LTIKPSYIELKAQSKPHVG-DENVHHYQLHIDLYKEIIPEKTMHKV-ANGQHYFLKLYKKD 97 (134)
T ss_dssp CCBCSSEEEECCEEC--------CEEBCEEEECSSCCCSSSEEEEE-CCC--CEEEEEECS
T ss_pred EEEECCEEEEEEecccccC-CccCceEEEEEEChhhccccccEEEE-CCCEEEEEEEEECC
Confidence 4455566666654211000 00013567778999999999999999 6777 999999977
No 33
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=71.45 E-value=5.1 Score=24.24 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=22.7
Q ss_pred CCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 38 GTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 38 ~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
+...=.++-.++.||+|+|++--... .....|+|.
T Consensus 79 G~~~I~V~f~id~nGiL~V~a~d~~t-g~~~~i~i~ 113 (152)
T 2op6_A 79 GVPQIEVTFEIDVNGILHVSAEDKGT-GNKNKLTIT 113 (152)
T ss_dssp TCSCEEEEEEECTTSCEEEEEEETTT-CCEEEEEEC
T ss_pred CCceEEEEEEECCCcEEEEEEEEecC-CcEEEEEee
Confidence 44333577788899999999863332 345566664
No 34
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=71.24 E-value=5.5 Score=24.46 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=23.8
Q ss_pred CCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 37 KGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 37 ~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
.+.-.=.|+-.++.||+|+|++--... .....|.|.
T Consensus 78 ~G~~~IeVtf~iD~nGiL~Vsa~d~~t-g~~~~i~I~ 113 (151)
T 3dqg_A 78 RGVPQVEVTFDIDANGIVNVSARDRGT-GKEQQIVIQ 113 (151)
T ss_dssp TTCSCEEEEEEECTTSEEEEEEEETTT-CCEEEEEEE
T ss_pred CCCcEEEEEEEeccCcEEEEEEEEccC-CCEeEEEEe
Confidence 444334577888999999999975442 345566653
No 35
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=70.56 E-value=5.7 Score=24.41 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=24.5
Q ss_pred CCCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 36 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 36 P~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
|.+.-.=.|+-.++.||+|+|++--... .....|.|.
T Consensus 77 p~G~~~IeVtf~iD~nGiL~Vsa~d~~t-g~~~~i~I~ 113 (152)
T 3dob_A 77 PRGVPQIEVTFNIDANGILNVSAEDKST-GKSNRITIQ 113 (152)
T ss_dssp CTTCCCEEEEEEECTTCCEEEEEEETTT-CCEEEEEEC
T ss_pred CCCCceEEEEEEeCCCCeEEEEEEEcCC-CCEEEEEEE
Confidence 3444334577888999999999975442 345566664
No 36
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.01 E-value=14 Score=21.67 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=28.8
Q ss_pred EEEEEE-CCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 29 YNREFL-LPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 29 f~R~~~-LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
|.-.+. |-..||+++-+.++ .++.+.|+|-|...
T Consensus 70 y~~~~~~L~~~I~~e~S~~~v-~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 70 YSMIVNNLLKPISVEGSSKKV-KTDTVLILCRKKVE 104 (127)
T ss_dssp EEEEEECBSSCCCTTTCEEEE-ETTEEEEEEECSSS
T ss_pred EEEEhHHhcCccCcccCEEEE-eCCEEEEEEEECCC
Confidence 555674 99999999999999 68999999999864
No 37
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=69.20 E-value=7 Score=22.96 Aligned_cols=30 Identities=13% Similarity=0.271 Sum_probs=23.0
Q ss_pred EEEEEEECCCCC-CcCCcEEEeCCCCEEEEEE
Q psy16256 28 EYNREFLLPKGT-NPESIKSSLSKDGVLTVEA 58 (74)
Q Consensus 28 ~f~R~~~LP~~v-d~~~i~A~l~~dGvL~I~~ 58 (74)
+..=+|.||.++ +.+++.+.+ ...-|.|.+
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i-~~~~l~v~~ 60 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVAL-SSSSIRVAM 60 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEE-CSSEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEE-EcCEEEEEE
Confidence 456678888887 888888888 567777776
No 38
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=66.22 E-value=6.9 Score=24.83 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=24.0
Q ss_pred CCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 37 KGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 37 ~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
.++-.=.|+-.++.||+|+|++--... .....|.|.
T Consensus 98 ~G~~~IeVtf~iD~nGiL~VsA~d~~t-g~~~~i~I~ 133 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANGIVHVSAKDKGT-GREQQIVIQ 133 (182)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTT-CCEEEEEES
T ss_pred CCCeeEEEEEEEecCCEEEEEEEEcCC-CCEeeEEEe
Confidence 344334577788999999999875442 345666664
No 39
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=64.85 E-value=9.3 Score=23.60 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=22.5
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEE
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEA 58 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~ 58 (74)
+..=+|.||.+++..++.+.+ ...-|.|.+
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i-~~~~L~v~~ 53 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGL-QSRHVALAV 53 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEE-CSSEEEEEE
T ss_pred EEEEEEECCCCCcccceEEEE-ecCEEEEEE
Confidence 456678888888888888888 566777765
No 40
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=62.52 E-value=8 Score=23.44 Aligned_cols=17 Identities=35% Similarity=0.513 Sum_probs=14.6
Q ss_pred CcEEEeCCCCEEEEEEeC
Q psy16256 43 SIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 43 ~i~A~l~~dGvL~I~~Pk 60 (74)
.+-+.+ .+|||+|+++.
T Consensus 48 ~~Dve~-~~gVLti~f~~ 64 (123)
T 3oeq_A 48 IPDVEL-SHGVMTLEIPA 64 (123)
T ss_dssp CCEEEE-CSSEEEEECTT
T ss_pred ceEEEc-cCCEEEEEECC
Confidence 378999 79999999974
No 41
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=62.50 E-value=5 Score=23.57 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=15.1
Q ss_pred CCcEEEeCCCCEEEEEEeC
Q psy16256 42 ESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 42 ~~i~A~l~~dGvL~I~~Pk 60 (74)
..+-+.+ .+|||+|+++.
T Consensus 28 ~d~D~e~-~~gVLti~f~~ 45 (106)
T 1ew4_A 28 SDIDCEI-NGGVLTITFEN 45 (106)
T ss_dssp SCCEEEE-ETTEEEEECTT
T ss_pred CCEeeec-cCCEEEEEECC
Confidence 3488999 79999999973
No 42
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=61.83 E-value=8.7 Score=24.94 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=24.3
Q ss_pred CCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 37 KGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 37 ~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
.++-.=.|+-.++.||+|+|++--... .....|.|.
T Consensus 79 ~G~~~IeVtf~iD~nGiL~V~a~d~~t-g~~~~i~I~ 114 (219)
T 4e81_A 79 RGMPQIEVTFDIDADGILHVSAKDKNS-GKEQKITIK 114 (219)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTT-CCEEEEEEC
T ss_pred CCCceEEEEEEeCCCCCEeeeeecccc-CccceEeee
Confidence 444334577788999999999975542 345666664
No 43
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=58.82 E-value=9.4 Score=22.39 Aligned_cols=30 Identities=23% Similarity=0.111 Sum_probs=24.1
Q ss_pred EEECCCCCCcCCcEEEeCCCC-EEEEEEeCCC
Q psy16256 32 EFLLPKGTNPESIKSSLSKDG-VLTVEAPLPA 62 (74)
Q Consensus 32 ~~~LP~~vd~~~i~A~l~~dG-vL~I~~Pk~~ 62 (74)
.-.|...|+++.-.-++ ++| .|.|.+-|..
T Consensus 66 ~g~L~~~I~~deS~w~i-~~~~~i~i~L~K~~ 96 (121)
T 3qor_A 66 DGELYNEVKVEESSWLI-ADGAVVTVHLEKIN 96 (121)
T ss_dssp EEEBSSCBCGGGCEEEE-ETTTEEEEEEEBSS
T ss_pred eccccccccccccEEEE-cCCCEEEEEEEECC
Confidence 44678888988888888 677 8999998875
No 44
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=58.70 E-value=14 Score=21.77 Aligned_cols=29 Identities=7% Similarity=0.052 Sum_probs=17.1
Q ss_pred EEEEEECCCC--CCcCCcEEEeCCCCEEEEEE
Q psy16256 29 YNREFLLPKG--TNPESIKSSLSKDGVLTVEA 58 (74)
Q Consensus 29 f~R~~~LP~~--vd~~~i~A~l~~dGvL~I~~ 58 (74)
..=+|.||.+ +...++.+.+ ...-|.|.+
T Consensus 19 V~i~I~lp~~~~~~~kdv~V~i-~~~~l~v~~ 49 (131)
T 1wfi_A 19 LDLAVPFRVSFRLKGKDVVVDI-QRRHLRVGL 49 (131)
T ss_dssp EEEEECCCCSSCCCTTSEEEEE-ETTEEEEEE
T ss_pred EEEEEECCCCCcccccceEEEE-eCCEEEEEE
Confidence 3344666665 6666666666 455566655
No 45
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=57.83 E-value=8.5 Score=21.18 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=14.1
Q ss_pred CCcEEEeCCCCEEEEEEeCC
Q psy16256 42 ESIKSSLSKDGVLTVEAPLP 61 (74)
Q Consensus 42 ~~i~A~l~~dGvL~I~~Pk~ 61 (74)
..|.|.| +||||.---|..
T Consensus 3 k~IeAiY-EnGVfkPLe~l~ 21 (69)
T 2nwt_A 3 KIIEAVY-ENGVFKPLQKVD 21 (69)
T ss_dssp CCEEEEE-ETTEEEESSCCC
T ss_pred ceEEEEE-ECCEEeECCcCC
Confidence 4589999 899997554433
No 46
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=56.79 E-value=12 Score=21.87 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=27.1
Q ss_pred EEEEEEECCCC--CCcCCcEEEeCCCCEEEEEEeC
Q psy16256 28 EYNREFLLPKG--TNPESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 28 ~f~R~~~LP~~--vd~~~i~A~l~~dGvL~I~~Pk 60 (74)
+..=+|.||.+ ++..++.+.+ ...-|.|.+.-
T Consensus 27 eV~v~V~lp~~~~~~~kdv~V~i-~~~~l~v~~kg 60 (121)
T 3qor_A 27 ELDLAVPFCVNFRLKGKDMVVDI-QRRHLRVGLKG 60 (121)
T ss_dssp EEEEEEECCCSSCCCGGGEEEEE-ETTEEEEEETT
T ss_pred eEEEEEECCCCCcccccceEEEE-EcCEEEEEEcC
Confidence 57778999998 9999999999 56788888763
No 47
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=54.02 E-value=14 Score=23.87 Aligned_cols=30 Identities=23% Similarity=0.300 Sum_probs=20.4
Q ss_pred CcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 43 SIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 43 ~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
.|+-.++.||+|+|++--... .....|+|.
T Consensus 82 ~Vtf~iD~nGiL~V~a~d~~t-g~~~~i~i~ 111 (227)
T 1u00_A 82 RVTFQVDADGLLSVTAMEKST-GVEASIQVK 111 (227)
T ss_dssp EEEEEECTTCCEEEEEEETTT-CCEEEEEEC
T ss_pred EEEEEECCCCcEEEEeecccc-cccceEEEE
Confidence 467778899999999864332 345566664
No 48
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=51.40 E-value=32 Score=20.98 Aligned_cols=34 Identities=6% Similarity=-0.042 Sum_probs=28.1
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
.|.-.+.|-..|+++ -+.+. ....+.|+|.|..+
T Consensus 49 ~y~~~l~L~~~Idpe-S~~~v-~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 49 RFEFSLELYGKIMTE-YRKNV-GLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEEEEBSSCEEEE-EEEEE-ESSSEEEEEEECCS
T ss_pred eEEEEeEhhhccccc-ceEEe-cCCEEEEEEEECCC
Confidence 466778899999999 88888 56779999999764
No 49
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=48.94 E-value=6.2 Score=22.16 Aligned_cols=16 Identities=31% Similarity=0.551 Sum_probs=13.9
Q ss_pred cCCcEEEeCCCCEEEEE
Q psy16256 41 PESIKSSLSKDGVLTVE 57 (74)
Q Consensus 41 ~~~i~A~l~~dGvL~I~ 57 (74)
..+-+|.| ++|+|+|.
T Consensus 46 KnkWKc~L-KdGim~in 61 (76)
T 1nvp_C 46 KNKWKFHL-KDGIMNLN 61 (76)
T ss_dssp TTEEEEEE-EEEEEEET
T ss_pred CceEEEEE-eccEEEEC
Confidence 56789999 99999984
No 50
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=47.32 E-value=2.9 Score=23.09 Aligned_cols=29 Identities=17% Similarity=0.096 Sum_probs=25.9
Q ss_pred ECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 34 LLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.||.+++.+.+...|..-|+..|.+++..
T Consensus 22 nLp~~~t~~~l~~~F~~~gi~~v~i~~~~ 50 (103)
T 2dng_A 22 NLPFNTVQGDIDAIFKDLSIRSVRLVRDK 50 (103)
T ss_dssp SCCTTCCHHHHHHHTTTSCEEEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHhCCceEEEEeecC
Confidence 68999999999999988899999999765
No 51
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=46.87 E-value=15 Score=22.33 Aligned_cols=17 Identities=41% Similarity=0.487 Sum_probs=14.8
Q ss_pred CCcEEEeCCCCEEEEEEe
Q psy16256 42 ESIKSSLSKDGVLTVEAP 59 (74)
Q Consensus 42 ~~i~A~l~~dGvL~I~~P 59 (74)
..+-+.+ .+|||+|+++
T Consensus 40 ~d~D~e~-~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSF-GSGVLTVKLG 56 (129)
T ss_dssp TTCEEEE-ETTEEEEECC
T ss_pred cceeeec-CCCEEEEEEc
Confidence 5688999 7999999996
No 52
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=44.88 E-value=14 Score=24.51 Aligned_cols=17 Identities=47% Similarity=0.771 Sum_probs=14.2
Q ss_pred CCcEEEeCCCCEEEEEE
Q psy16256 42 ESIKSSLSKDGVLTVEA 58 (74)
Q Consensus 42 ~~i~A~l~~dGvL~I~~ 58 (74)
..+++.+++||+|+|..
T Consensus 10 ~~~~~~~~~~g~l~i~g 26 (379)
T 4h09_A 10 STIKGVLTDDGVLTISG 26 (379)
T ss_dssp SSEEEEEETTSEEEEEE
T ss_pred ceEEEEEcCCceEEEEe
Confidence 45788888999999984
No 53
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=43.68 E-value=40 Score=22.05 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=23.2
Q ss_pred EEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 25 VYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 25 ~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
..+.|.|+|.|=.. +. .-.. -|-+|+|+.+-..
T Consensus 174 ~~rsF~RTFvL~P~-~~---~~~I-~nD~l~ir~~s~~ 206 (221)
T 1of5_A 174 SKKSFDRTWVIVPM-NN---SVII-ASDLLTVRAYSTG 206 (221)
T ss_dssp EEEEEEEEEEEEEE-TT---EEEE-EEEEEEEEECCCC
T ss_pred CccceEEEEEEEec-CC---eEEE-EeeEEEeecCCCc
Confidence 57899999999444 22 2344 5789999987655
No 54
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae}
Probab=43.23 E-value=45 Score=20.93 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=23.0
Q ss_pred eEEEEEEEEEECCCCCCcCCcEEEeCCCCEE
Q psy16256 24 SVYREYNREFLLPKGTNPESIKSSLSKDGVL 54 (74)
Q Consensus 24 ~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL 54 (74)
+.+-...-+|.||.+-...+|+++- +|-|
T Consensus 115 ya~~~~~e~f~vP~G~~I~~inVWs--~gWl 143 (152)
T 4gx7_A 115 YVTNAHEDRFDLPDAAKITQLKIWA--DDWL 143 (152)
T ss_dssp TEEEEEEEEEECCTTCCEEEEEEEE--CSSS
T ss_pred ccccccceeEECCCCCeEEEEEEee--cCcE
Confidence 4555678999999999999999886 4544
No 55
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=43.12 E-value=29 Score=22.67 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=21.1
Q ss_pred EEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 25 VYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 25 ~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
..+.|.|+|.|=..-+.. -.. -|-+|+|+.+-..
T Consensus 179 ~~rsF~RtFvL~P~~~~~---~~I-~nD~l~ir~~~~~ 212 (219)
T 1q40_B 179 SKKSFDRTFVVIPGPNGS---MIV-ASDTLLIRPYTSD 212 (219)
T ss_dssp CCEEEEEEEEEECC---C---CEE-EEEEEEEEECCSC
T ss_pred CccceEEEEEEEECCCCc---EEE-EeeEEEEecCCCc
Confidence 468999999983322221 223 3678999887554
No 56
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=41.90 E-value=9.2 Score=21.59 Aligned_cols=16 Identities=50% Similarity=0.690 Sum_probs=13.8
Q ss_pred cCCcEEEeCCCCEEEEE
Q psy16256 41 PESIKSSLSKDGVLTVE 57 (74)
Q Consensus 41 ~~~i~A~l~~dGvL~I~ 57 (74)
..+-+|.| ++|+++|.
T Consensus 48 KnKWKc~L-KdGi~~in 63 (79)
T 1nh2_C 48 KARWKCSL-KDGVVTIN 63 (79)
T ss_dssp TTEEEEEE-EEEEEEET
T ss_pred cceEEEEE-eeeEEEEC
Confidence 55789999 99999984
No 57
>2kxo_A Cell division topological specificity factor; MINE, MIND-binding, to specificity, cell cycle; NMR {Neisseria gonorrhoeae}
Probab=41.36 E-value=22 Score=20.41 Aligned_cols=26 Identities=27% Similarity=0.409 Sum_probs=20.9
Q ss_pred CCCcCCcEEEeCCCC---EEEEEEeCCCC
Q psy16256 38 GTNPESIKSSLSKDG---VLTVEAPLPAL 63 (74)
Q Consensus 38 ~vd~~~i~A~l~~dG---vL~I~~Pk~~~ 63 (74)
.||.++++-.++.++ +|.+.+|.+..
T Consensus 56 ~Id~~~v~V~l~~~~~~~vL~~nIpl~~~ 84 (95)
T 2kxo_A 56 NVSLDNIRISQEKQDGMDVLELNITLPEQ 84 (95)
T ss_dssp CCCTTSEEEEEEEETTEEEEEEEEEECCC
T ss_pred ecchhheEEEEEeCCCcEEEEEEEEeCCC
Confidence 578999999997655 89988887653
No 58
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.27 E-value=2.8 Score=23.18 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=25.5
Q ss_pred ECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 34 LLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.||.+++.+++...|..-|+..|.+++..
T Consensus 22 nlp~~~t~~~l~~~F~~~Gi~~v~i~~~~ 50 (104)
T 1wi8_A 22 NLPYDVTEESIKEFFRGLNISAVRLPREP 50 (104)
T ss_dssp SCCSSCCHHHHHHHTTTSCEEEEECCBCS
T ss_pred CCCCcCCHHHHHHHHHHCCceEEEEecCC
Confidence 58999999999999988899999998764
No 59
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=40.69 E-value=5.2 Score=21.99 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=25.3
Q ss_pred ECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 34 LLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.||.+++.+.+...|..-|+..|.+++..
T Consensus 26 nLp~~~t~~~l~~~F~~~Gi~~v~i~~~~ 54 (100)
T 2j76_E 26 NLPYDVTEESIKEFFRGLNISAVRLPREP 54 (100)
T ss_dssp CCSSCCSSSHHHHHSCSSCEEEEECSCCT
T ss_pred CCCCCCCHHHHHHHHHhcCCeEEEEEecC
Confidence 57999999999999988898899988764
No 60
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=40.52 E-value=35 Score=22.44 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=29.8
Q ss_pred EEEEEEEEEeecCC-CeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeC
Q psy16256 9 FPIVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 9 ~L~I~g~~~~~~~~-~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk 60 (74)
.++|+|.-++.... ....|.|.|+|.|-.+-+. +-.. -|-+|.|+-+-
T Consensus 123 ~i~V~G~f~e~~~~~~~~~r~F~rtFvL~p~~~~---~~~I-~ND~l~l~~~s 171 (250)
T 1jkg_B 123 CFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNS---GLCI-VNDELFVRNAS 171 (250)
T ss_dssp EEEEEEEEEECSSTTTTCEEEEEEEEEEEECTTS---SEEE-EEEEEEEEECC
T ss_pred EEEEEEEEEECCCCCCCCceeeEEEEEEEECCCC---cEEE-EeeEEEEECCC
Confidence 35788987653321 2347999999999432222 1333 47789988763
No 61
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=37.98 E-value=72 Score=20.65 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=23.7
Q ss_pred EEEECCEEEEEEEEEeecCC-------------CeEEEEEEEEEECCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKSDS-------------KSVYREYNREFLLPKG 38 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~~~-------------~~~~r~f~R~~~LP~~ 38 (74)
+.+++|.|+|++.++...+. .+.+..|.=++.||.+
T Consensus 49 v~v~~G~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGGVLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETTEEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECCEEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 67899999999987641111 1234467667888864
No 62
>2wkd_A ORF34P2; SSB, single-stranded DNA binding, DNA binding protein; 2.10A {Lactococcus phage P2} PDB: 2wkc_A
Probab=37.45 E-value=65 Score=19.21 Aligned_cols=31 Identities=16% Similarity=0.305 Sum_probs=16.9
Q ss_pred CCEEEEEEEEEeecCCC-----eEEEEEEEEEECCCC
Q psy16256 7 NDFPIVHAKHEEKSDSK-----SVYREYNREFLLPKG 38 (74)
Q Consensus 7 ~~~L~I~g~~~~~~~~~-----~~~r~f~R~~~LP~~ 38 (74)
++.|+|+|+-+.+.++. +.+-...|.| +|.+
T Consensus 57 GDivTvsgri~~ke~G~y~nyNf~fptVe~~f-~~~d 92 (119)
T 2wkd_A 57 GDTVTVSGRVQAKESGEYVNYNFVFPTVEKVF-ITND 92 (119)
T ss_dssp TCEEEEEEEEEEC------CEEEEEEEEEEEC-C---
T ss_pred CcEEEEeceeeeeccCceEeeeeecceeeeEE-eeCC
Confidence 67899999877655432 3444566666 6544
No 63
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=37.28 E-value=79 Score=20.52 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=22.3
Q ss_pred EEEECCEEEEEEEEEe-ecCCC-----------eEEEEEEEEEECCC
Q psy16256 3 FGSPNDFPIVHAKHEE-KSDSK-----------SVYREYNREFLLPK 37 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~-~~~~~-----------~~~r~f~R~~~LP~ 37 (74)
+.+++|.|.|++.++. ..+.. |.+..|.=++.||.
T Consensus 57 v~v~~G~L~l~~~~~~~~~~~~~ts~~i~S~~~~~yG~~e~r~K~~~ 103 (234)
T 3i4i_A 57 IELKDGILNLSITDDMPSSSKPYAGAEYRTRDKFGYGLYQVRMKPAK 103 (234)
T ss_dssp EEEETTEEEEEEEECCTTCSSSEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEECCEEEEEEEccCCCCCCCEEEEEEEEeCceeCEEEEEEEEecC
Confidence 5788999999997751 11111 23346777777775
No 64
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=35.83 E-value=12 Score=19.21 Aligned_cols=10 Identities=40% Similarity=0.760 Sum_probs=8.1
Q ss_pred ECCCCCCcCC
Q psy16256 34 LLPKGTNPES 43 (74)
Q Consensus 34 ~LP~~vd~~~ 43 (74)
.||++||++-
T Consensus 11 ~lP~~VD~eV 20 (48)
T 2kwv_A 11 ALPEGVDQEV 20 (48)
T ss_dssp SSCTTCCGGG
T ss_pred cCCCCCCHHH
Confidence 6899999863
No 65
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=35.48 E-value=32 Score=17.91 Aligned_cols=17 Identities=18% Similarity=-0.013 Sum_probs=14.1
Q ss_pred eEEEECCEEEEEEEEEe
Q psy16256 2 LFGSPNDFPIVHAKHEE 18 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~~ 18 (74)
.|+++++.++|+|+-+.
T Consensus 36 nvtwdgdtvtvegqleg 52 (62)
T 2gjh_A 36 NVTWDGDTVTVEGQLEG 52 (62)
T ss_dssp EEEECSSCEEEEEECCC
T ss_pred eeEEcCCEEEEEeEEcC
Confidence 57899999999997643
No 66
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.31 E-value=51 Score=20.98 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=16.6
Q ss_pred EEEEEECCCCCCcCCcEEEeCCCCEEEEEEeC
Q psy16256 29 YNREFLLPKGTNPESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 29 f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk 60 (74)
+.+.+.+|++|+ +++ ++..++|.-|+
T Consensus 7 ~~~~I~IP~gV~-----v~i-~~~~V~VkGpk 32 (184)
T 3j21_F 7 IREEVEIPEGVE-----VTV-EGYKVKVKGPK 32 (184)
T ss_dssp CEEEEECCSSCE-----EEE-SSSEEEEECSS
T ss_pred eeEEEeCCCCcE-----EEE-eCCEEEEEcCC
Confidence 467888998874 345 45555555554
No 67
>1wez_A HnRNP H', FTP-3, heterogeneous nuclear ribonucleoprotein H'; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.03 E-value=3.5 Score=23.14 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=25.3
Q ss_pred ECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 34 LLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.||.+++.+++...|..-|++.|.+++..
T Consensus 22 nLp~~~te~~l~~~F~~~G~~~v~i~~d~ 50 (102)
T 1wez_A 22 GLPYRATENDIYNFFSPLNPMRVHIEIGP 50 (102)
T ss_dssp SCCTTCCHHHHHHSSCSCCCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHcCceEEEEEECC
Confidence 68999999999999987798889888654
No 68
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=32.48 E-value=45 Score=23.72 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=22.2
Q ss_pred CCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 38 GTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 38 ~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
+...=.++-.++.||+|+|++--... .....|.|.
T Consensus 437 g~~~i~v~f~id~~gil~v~a~~~~~-g~~~~~~i~ 471 (509)
T 2v7y_A 437 GVPQIEVTFDIDANGIVHVRAKDLGT-NKEQSITIK 471 (509)
T ss_dssp TCSCEEEEEEECTTSCEEEEEEETTT-CCEEEEEEC
T ss_pred cccEEEEEEEEcCCceEEEEEEEcCC-CcEEEEEEE
Confidence 43333467778889999999864332 344566653
No 69
>3c8l_A FTSZ-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.22A {Nostoc punctiforme}
Probab=31.57 E-value=3.5 Score=25.15 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=24.2
Q ss_pred EEEEEECCCCCCcCCcEEEeCCCCEEEEEEe
Q psy16256 29 YNREFLLPKGTNPESIKSSLSKDGVLTVEAP 59 (74)
Q Consensus 29 f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~P 59 (74)
..=-++-|+.||.+.++|.| .=|.-+|++=
T Consensus 58 V~vgVp~pe~vD~e~v~a~l-PyG~~~v~vv 87 (122)
T 3c8l_A 58 VQVAVPYPEQVREEEVLAVL-PFGRKTLTVE 87 (122)
T ss_dssp EEEEESSGGGCCHHHHHTTS-CSSEEEEEEE
T ss_pred EEEeCCChhhcCHHHHHhhC-CCCceEEEEE
Confidence 33445669999999999999 8999888764
No 70
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=31.48 E-value=71 Score=20.23 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=15.9
Q ss_pred EEEEECCCCCCcCCcEEEeCCCCEEEEEEeC
Q psy16256 30 NREFLLPKGTNPESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 30 ~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk 60 (74)
.+.+.+|++|+ .++ ++..++|.-||
T Consensus 3 ~~pI~IP~gV~-----v~i-~~~~vtVkGpk 27 (178)
T 1vq8_E 3 RVELEIPEDVD-----AEQ-DHLDITVEGDN 27 (178)
T ss_dssp EEEEECCTTCE-----EEE-ETTEEEEEETT
T ss_pred cccEEcCCCCE-----EEE-eCCEEEEECCC
Confidence 45778888765 445 45566666665
No 71
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=31.33 E-value=7.8 Score=22.26 Aligned_cols=16 Identities=31% Similarity=0.490 Sum_probs=13.3
Q ss_pred ECCCCCCcCCcEEEeC
Q psy16256 34 LLPKGTNPESIKSSLS 49 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~ 49 (74)
.||++||+.....-|+
T Consensus 34 ~lP~gVD~tklE~YLS 49 (88)
T 1ujs_A 34 RLPKDVDRTRLERHLS 49 (88)
T ss_dssp CCCSSCCTTTGGGGSC
T ss_pred CCCcccCHHHHHhcCC
Confidence 6999999998877774
No 72
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=31.31 E-value=46 Score=19.92 Aligned_cols=35 Identities=9% Similarity=0.065 Sum_probs=29.1
Q ss_pred EEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeCCCC
Q psy16256 28 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 63 (74)
Q Consensus 28 ~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~~ 63 (74)
.|.=.+.|-..||++.-+.++ .++.+.|.|.|.+.
T Consensus 78 ~y~~~~~L~~~I~pe~S~~~v-~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 78 TFRWQVKLRNLIEPEQCTFCF-TASRIDICLRKRQS 112 (134)
T ss_dssp CEEEEEEBSSCEEEEEEEEEE-CSSEEEEEEEESSS
T ss_pred eEEEeccccccCCchhCEEEE-eCCEEEEEEEECCC
Confidence 355567899999999889999 67999999999763
No 73
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=30.32 E-value=1e+02 Score=19.21 Aligned_cols=35 Identities=11% Similarity=-0.031 Sum_probs=22.8
Q ss_pred EEEEC-CEEEEEEEEEee----c-----CCCeEEEEEEEEEECCC
Q psy16256 3 FGSPN-DFPIVHAKHEEK----S-----DSKSVYREYNREFLLPK 37 (74)
Q Consensus 3 ~~v~~-~~L~I~g~~~~~----~-----~~~~~~r~f~R~~~LP~ 37 (74)
+.+++ |.|.|++.++.. + ...|.++.|.=+++||.
T Consensus 39 v~v~~~G~L~i~~~~~~~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTSCEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCCEEEEEEecCCCCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 56788 999999987541 0 11234456777777775
No 74
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=29.94 E-value=93 Score=20.65 Aligned_cols=36 Identities=8% Similarity=-0.017 Sum_probs=24.9
Q ss_pred EEEECCEEEEEEEEEeec----CCCeEEEEEEEEEECCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKS----DSKSVYREYNREFLLPKG 38 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~----~~~~~~r~f~R~~~LP~~ 38 (74)
+.+++|.|.|++.+.... ...+.++.|.=++.||.+
T Consensus 35 v~v~~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 35 QRVDQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp EEEETTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred EEEECCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCC
Confidence 567899999998653211 012456788899999875
No 75
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=29.82 E-value=34 Score=25.09 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=22.7
Q ss_pred CCCCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEec
Q psy16256 36 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPI 72 (74)
Q Consensus 36 P~~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I 72 (74)
|.++..=.++-.++.||+|+|++--... .+...|.|
T Consensus 466 ~~g~~~i~v~f~id~~gil~v~a~~~~t-g~~~~i~i 501 (605)
T 4b9q_A 466 PRGMPQIEVTFDIDADGILHVSAKDKNS-GKEQKITI 501 (605)
T ss_dssp STTCCCEEEEEEECTTSCEEEEEEETTT-CCEECCEE
T ss_pred cCCCceEEEEEEEcCCcEEEEEEEecCC-CcEEEEEe
Confidence 3444434567778899999999875442 33445554
No 76
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=29.77 E-value=52 Score=24.10 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=22.4
Q ss_pred CCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 38 GTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 38 ~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
+...=.++-.++.||+|+|++--... .....|.|.
T Consensus 468 g~~~i~v~f~id~~gil~v~a~~~~t-g~~~~i~i~ 502 (605)
T 2kho_A 468 GMPQIEVTFDIDADGILHVSAKDKNS-GKEQKITIK 502 (605)
T ss_dssp TCSCEEEEEEECTTSCEEEEEEETTT-CCEEEEEEC
T ss_pred CCcEEEEEEEEcCCCceeEEEEEcCC-Cceeecccc
Confidence 43333467778889999999864332 345566654
No 77
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=29.47 E-value=42 Score=19.20 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=15.5
Q ss_pred EEEEECCCCCCcCCcEEEeCCCCEEEEEEeC
Q psy16256 30 NREFLLPKGTNPESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 30 ~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk 60 (74)
.+.+.+|++|+ .++ ++..++|.-||
T Consensus 14 k~pI~IP~gV~-----V~i-~~~~VtVKGPk 38 (100)
T 2cql_A 14 NQTVDIPENVD-----ITL-KGRTVIVKGPR 38 (100)
T ss_dssp CEEECCCSSCE-----EEE-ETTEEEEEETT
T ss_pred cCcEEcCCCCE-----EEE-eCCEEEEECCC
Confidence 56788988775 444 45555555554
No 78
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=27.94 E-value=63 Score=23.36 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=22.2
Q ss_pred CCCcCCcEEEeCCCCEEEEEEeCCCCCCCCeEEecc
Q psy16256 38 GTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 73 (74)
Q Consensus 38 ~vd~~~i~A~l~~dGvL~I~~Pk~~~~~~~r~I~I~ 73 (74)
+...=.++-.++.||+|+|++--... .....|.|.
T Consensus 470 g~~~i~v~f~id~~gil~v~a~~~~t-g~~~~~~i~ 504 (554)
T 1yuw_A 470 GVPQIEVTFDIDANGILNVSAVDKST-GKENKITIT 504 (554)
T ss_dssp TCCCEEEEEEECTTCCEEEEEEETTT-CCEEEEEEC
T ss_pred cccEEEEEEEEccCceEEEEEEeccC-CCceeEEEe
Confidence 33333477788889999999864332 334566653
No 79
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=26.35 E-value=90 Score=21.46 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=23.3
Q ss_pred EEEECCEEEEEEEEEeecC----------CCeEEE-EEEEEEECCCC
Q psy16256 3 FGSPNDFPIVHAKHEEKSD----------SKSVYR-EYNREFLLPKG 38 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~~~~----------~~~~~r-~f~R~~~LP~~ 38 (74)
+.+++|.|+|++.++.... ..|.+. .|.=++.||.+
T Consensus 107 v~v~dG~L~I~a~~~~g~~~~tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 107 SYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp EEEETTEEEEECEECTTSSCEEECEEEESSCBCSSEEEEEEEECCSS
T ss_pred EEEECCEEEEEEEecCCCCcEEeeEEEeCccEeCCeEEEEEEEecCC
Confidence 5789999999998653110 113344 47777788765
No 80
>2lu2_A H4, putative, microneme tgmic5 protein; micronemal protein 5, invasion, pathogenesis, cell adhesion; NMR {Toxoplasma gondii}
Probab=25.94 E-value=56 Score=19.77 Aligned_cols=19 Identities=32% Similarity=0.378 Sum_probs=16.0
Q ss_pred cEEEeCCCCEEEEEEeCCC
Q psy16256 44 IKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 44 i~A~l~~dGvL~I~~Pk~~ 62 (74)
--+.|++.||-.|.+|+.-
T Consensus 92 sis~ltetgvt~i~lp~tv 110 (138)
T 2lu2_A 92 SISFLTETGVTMIELPKTV 110 (138)
T ss_dssp EEEEETTTTEEEEEECTTS
T ss_pred EEEEEeccCcEEEecccch
Confidence 4577889999999999864
No 81
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=25.27 E-value=7.9 Score=21.11 Aligned_cols=15 Identities=33% Similarity=0.707 Sum_probs=12.2
Q ss_pred ECCCCCCcCCcEEEe
Q psy16256 34 LLPKGTNPESIKSSL 48 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l 48 (74)
.||++||+.....-|
T Consensus 19 ~lP~gVD~~~lE~yL 33 (67)
T 1yu8_X 19 DLPRGVDPSAKENHL 33 (67)
T ss_dssp GSCTTCCTTCGGGGS
T ss_pred CCCcccChHHHHhcC
Confidence 589999998876655
No 82
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=25.13 E-value=46 Score=19.70 Aligned_cols=16 Identities=6% Similarity=-0.076 Sum_probs=13.6
Q ss_pred eEEEECCEEEEEEEEE
Q psy16256 2 LFGSPNDFPIVHAKHE 17 (74)
Q Consensus 2 ~~~v~~~~L~I~g~~~ 17 (74)
.|+++++.++++|.-.
T Consensus 80 ~V~V~~g~VtLsG~v~ 95 (132)
T 2kgs_A 80 GLKVERDTVTLTGTAP 95 (132)
T ss_dssp EEEEEETEEEEECEES
T ss_pred EEEEECCEEEEEEEEC
Confidence 5889999999999753
No 83
>2exn_A Hypothetical protein BOR11; beta barrel containing fold, autostructure, autoassign, structure, structural genomics, PSI; NMR {Bordetella bronchiseptica} SCOP: b.165.1.1
Probab=24.35 E-value=49 Score=19.59 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=14.9
Q ss_pred cCCcEEEeCCCCEEEEEEeCC
Q psy16256 41 PESIKSSLSKDGVLTVEAPLP 61 (74)
Q Consensus 41 ~~~i~A~l~~dGvL~I~~Pk~ 61 (74)
.-.|++.+ .+|.|+|++|-.
T Consensus 45 Lali~~~~-~~~~L~l~~pg~ 64 (136)
T 2exn_A 45 LAEVSVEL-RMGYLVLKAPGM 64 (136)
T ss_dssp GGCCEEEE-CSSEEEEECSSS
T ss_pred ccEEEEEe-cCCEEEEEeCCC
Confidence 34578888 578899888753
No 84
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=23.57 E-value=58 Score=18.83 Aligned_cols=20 Identities=10% Similarity=0.361 Sum_probs=16.1
Q ss_pred EEEEEECCCCCCcCCcEEEeCCCC
Q psy16256 29 YNREFLLPKGTNPESIKSSLSKDG 52 (74)
Q Consensus 29 f~R~~~LP~~vd~~~i~A~l~~dG 52 (74)
|..++.||.. ..+.+.| .||
T Consensus 51 ~~~TI~~~~~---~~l~~~F-~dG 70 (102)
T 2c3v_A 51 VKVTIEAEEG---SQLRAAF-NNG 70 (102)
T ss_dssp EEEEECCCTT---CEEEEEE-ECS
T ss_pred eEEEEecCCC---ceEEEEE-eCC
Confidence 7899999854 6889999 676
No 85
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=23.00 E-value=6.5 Score=21.45 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=12.4
Q ss_pred EECCCCCCcCCcEEEe
Q psy16256 33 FLLPKGTNPESIKSSL 48 (74)
Q Consensus 33 ~~LP~~vd~~~i~A~l 48 (74)
-.||++||+.....-|
T Consensus 19 ~~lP~gVD~~~lE~yL 34 (68)
T 1qzp_A 19 TKLPPGVDRMRLERHL 34 (68)
T ss_dssp CCCCSSCCGGGCGGGB
T ss_pred cCCCCCCCchHHHhhC
Confidence 3689999998776655
No 86
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=22.24 E-value=11 Score=20.90 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=23.7
Q ss_pred ECCCCCCcCCcEEEeCCCC-EEEEEEeCCC
Q psy16256 34 LLPKGTNPESIKSSLSKDG-VLTVEAPLPA 62 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~~dG-vL~I~~Pk~~ 62 (74)
.||.+++.+.+...|++-| |..+.+++..
T Consensus 26 nLp~~~te~~L~~~F~~~G~I~~v~i~~d~ 55 (99)
T 4fxv_A 26 YLPQNMTQDELRSLFSSIGEVESAKLIRDK 55 (99)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHhcCCEEEeEeeecC
Confidence 5899999999999997766 6678888754
No 87
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=22.18 E-value=1.7e+02 Score=18.93 Aligned_cols=35 Identities=11% Similarity=-0.047 Sum_probs=22.3
Q ss_pred EEEEC-CEEEEEEEEEee---------cCCCeEEEEEEEEEECCC
Q psy16256 3 FGSPN-DFPIVHAKHEEK---------SDSKSVYREYNREFLLPK 37 (74)
Q Consensus 3 ~~v~~-~~L~I~g~~~~~---------~~~~~~~r~f~R~~~LP~ 37 (74)
+.+.+ |.|+|++.++.. +...|.+..|.=++.+|.
T Consensus 63 v~v~~~G~L~l~~~~~~~~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPAYNKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 56776 789999987531 011244556777777774
No 88
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=21.81 E-value=25 Score=19.03 Aligned_cols=15 Identities=33% Similarity=0.634 Sum_probs=11.8
Q ss_pred ECCCCCCcCCcEEEe
Q psy16256 34 LLPKGTNPESIKSSL 48 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l 48 (74)
.||++||+.....-|
T Consensus 19 ~lP~gVD~~~lE~yL 33 (67)
T 2k6m_S 19 PLPEGVDPLKLEIYL 33 (67)
T ss_dssp CCCSSSBTTBCGGGS
T ss_pred CCCCCCCchHHHhhC
Confidence 589999998776555
No 89
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=20.96 E-value=13 Score=25.15 Aligned_cols=23 Identities=35% Similarity=0.665 Sum_probs=10.6
Q ss_pred EEEEEEEECCCCCCcCCcEEEeC
Q psy16256 27 REYNREFLLPKGTNPESIKSSLS 49 (74)
Q Consensus 27 r~f~R~~~LP~~vd~~~i~A~l~ 49 (74)
-+|.-.|.||.+++++.|+.+|+
T Consensus 128 ~e~~~~f~lp~gi~~e~I~~SYS 150 (242)
T 3uux_B 128 PNFQDSFLIPPGVETAAISSSYS 150 (242)
T ss_dssp -----------CCCCCGGGGSCC
T ss_pred ccccccccCCCCCCHHHhccccc
Confidence 47899999999999999988874
No 90
>2e0g_A Chromosomal replication initiator protein DNAA; domain structure, structural genomics, NPPSFA; NMR {Escherichia coli K12}
Probab=20.57 E-value=93 Score=17.27 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=12.3
Q ss_pred cEEEeCCCCEEEEEEeC
Q psy16256 44 IKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 44 i~A~l~~dGvL~I~~Pk 60 (74)
++..+ ++|.|+|.+|-
T Consensus 28 l~~~~-~~~~l~l~vPn 43 (107)
T 2e0g_A 28 LQAEL-SDNTLALYAPN 43 (107)
T ss_dssp SEEEE-CSSEEEEEESS
T ss_pred CcCcc-cCCEEEEEeCC
Confidence 34467 68999999984
No 91
>1rm1_C Transcription initiation factor IIA large chain; yeast TFIIA, TBP protein, ATA-box DNA, transcription/DNA complex; 2.50A {Saccharomyces cerevisiae}
Probab=20.52 E-value=25 Score=24.22 Aligned_cols=16 Identities=50% Similarity=0.690 Sum_probs=13.6
Q ss_pred cCCcEEEeCCCCEEEEE
Q psy16256 41 PESIKSSLSKDGVLTVE 57 (74)
Q Consensus 41 ~~~i~A~l~~dGvL~I~ 57 (74)
..+-+|.| +||||+|.
T Consensus 255 knkWKc~l-KdGi~~in 270 (286)
T 1rm1_C 255 KARWKCSL-KDGVVTIN 270 (286)
T ss_dssp TTEEEEEE-EEEEEECS
T ss_pred ccceeEEe-eeeeEEEC
Confidence 56789999 99999974
No 92
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=20.51 E-value=63 Score=22.12 Aligned_cols=15 Identities=7% Similarity=-0.183 Sum_probs=13.2
Q ss_pred EEEECCEEEEEEEEE
Q psy16256 3 FGSPNDFPIVHAKHE 17 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~ 17 (74)
+.+++|.|+|+|+++
T Consensus 76 v~v~dG~L~I~a~~~ 90 (308)
T 4atf_A 76 SYVADGELKMWATRK 90 (308)
T ss_dssp EEEETTEEEEECEEC
T ss_pred eEEECCEEEEEEEec
Confidence 678999999999875
No 93
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=20.51 E-value=1e+02 Score=18.47 Aligned_cols=25 Identities=8% Similarity=0.082 Sum_probs=15.6
Q ss_pred EEEEEEEEeecCCCeEEEEEEEEEECCC
Q psy16256 10 PIVHAKHEEKSDSKSVYREYNREFLLPK 37 (74)
Q Consensus 10 L~I~g~~~~~~~~~~~~r~f~R~~~LP~ 37 (74)
+.|+|.-... + -..|.|.|+|.|-.
T Consensus 106 I~V~G~~~~~--~-~~~r~F~qtFvL~p 130 (154)
T 2qiy_A 106 IMATGEMFWT--G-TPVYKFCQTFILLP 130 (154)
T ss_dssp EEEEEEEEET--T-CCCEEEEEEEEEEE
T ss_pred EEEEEEEEEC--C-CCCceEEEEEEEEE
Confidence 3466664431 1 24678999999943
No 94
>3nv0_A Nuclear RNA export factor 2; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=20.41 E-value=78 Score=20.29 Aligned_cols=48 Identities=8% Similarity=0.133 Sum_probs=28.7
Q ss_pred EEEEEEEEEeec------CCCeEEEEEEEEEECCCCCCcCCcEEEeCCCCEEEEEEeC
Q psy16256 9 FPIVHAKHEEKS------DSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPL 60 (74)
Q Consensus 9 ~L~I~g~~~~~~------~~~~~~r~f~R~~~LP~~vd~~~i~A~l~~dGvL~I~~Pk 60 (74)
.++|+|.-++.. ...-..+.|.|+|.|=.+-+ .--+ . -|-+|.|+.+-
T Consensus 133 ~i~V~G~f~e~~~~~~~~~~~~~~r~FsRtFiL~P~~~--g~~~-I-~ND~L~Ir~~s 186 (205)
T 3nv0_A 133 GFTLHGTFRDGPSAIKPENTEEHDNYFTRTFMVAPRGE--GKVA-I-VSDQLFISSMS 186 (205)
T ss_dssp EEEEEEEEEETHHHHSCCSCSTTCEEEEEEEEEEECST--TCEE-E-EEEEEEEECCC
T ss_pred EEEEEEEEEEcccccccccCCCCCceeEEEEEEEECCC--CcEE-E-EecEEEeeCCC
Confidence 456889866531 01234688999999832212 1233 3 47899998764
No 95
>2hgn_A Heterogeneous nuclear ribonucleoprotein F; RNA recognition motif, G-tract, G-quadruplex, alternative splicing, RNA binding protein; NMR {Homo sapiens} PDB: 2kg1_A
Probab=20.16 E-value=6.6 Score=23.62 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=25.3
Q ss_pred ECCCCCCcCCcEEEeCCCCEEEEEEeCCC
Q psy16256 34 LLPKGTNPESIKSSLSKDGVLTVEAPLPA 62 (74)
Q Consensus 34 ~LP~~vd~~~i~A~l~~dGvL~I~~Pk~~ 62 (74)
.||.+++.++++..|.+-|+..|.+++..
T Consensus 53 nLp~~~te~dL~~~F~~~Gi~~v~i~~d~ 81 (139)
T 2hgn_A 53 GLPYKATENDIYNFFSPLNPVRVHIEIGP 81 (139)
T ss_dssp SCCTTCCHHHHHHHHCSCCCSEEECCCSS
T ss_pred CCCCCCCHHHHHHHHHhcCCeEEEEEECC
Confidence 68999999999999988898889988754
No 96
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=20.12 E-value=1.1e+02 Score=19.78 Aligned_cols=16 Identities=13% Similarity=-0.020 Sum_probs=13.6
Q ss_pred EEEECCEEEEEEEEEe
Q psy16256 3 FGSPNDFPIVHAKHEE 18 (74)
Q Consensus 3 ~~v~~~~L~I~g~~~~ 18 (74)
+.+++|.|+|++.++.
T Consensus 48 v~v~~G~L~I~a~~~~ 63 (271)
T 1dyp_A 48 ATVSKGKLKLTTKRES 63 (271)
T ss_dssp EEEETTEEEEEEEEEE
T ss_pred EEEECCEEEEEEEecc
Confidence 5789999999998754
Done!