Your job contains 1 sequence.
>psy16257
MSTEDYNEQQEEEATGNHPGYKKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELK
TYHEVLDEVYYKVQHLEPWEKGSRKTSGQTGMCGGVRGVGAGGIVSTAFCLLYKLFTLKM
TRKQLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTI
GNMLRSFLTKLEWHGTLFPRIPVPIQQKLEKQMSAKFPPVYSQAGSGNYQQGRGGGGNYQ
NRSAPGAMSTNAKHIPDNEAHYGEAERHAKTSGYSDHKKSDRGDSYKRSYDSKDDRYKSS
SRYASPERKKYRDDSRDTYRDRDKYSSSSKYDKYSKDDRYSSSKDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16257
(346 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5VTL8 - symbol:PRPF38B "Pre-mRNA-splicing fact... 762 1.3e-75 1
RGD|1562940 - symbol:Prpf38b "PRP38 pre-mRNA processing f... 762 1.3e-75 1
MGI|MGI:1914171 - symbol:Prpf38b "PRP38 pre-mRNA processi... 761 1.7e-75 1
ZFIN|ZDB-GENE-040426-2878 - symbol:prpf38b "PRP38 pre-mRN... 747 5.1e-74 1
FB|FBgn0030468 - symbol:CG1622 species:7227 "Drosophila m... 737 5.9e-73 1
WB|WBGene00022434 - symbol:Y108G3AL.2 species:6239 "Caeno... 615 5.0e-60 1
TAIR|locus:2169160 - symbol:ATSRL1 species:3702 "Arabidop... 310 4.6e-40 2
DICTYBASE|DDB_G0288401 - symbol:prpf38b "putative U4/U6.U... 281 9.0e-38 2
>UNIPROTKB|Q5VTL8 [details] [associations]
symbol:PRPF38B "Pre-mRNA-splicing factor 38B" species:9606
"Homo sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] Pfam:PF03371 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 EMBL:AL591719 EMBL:AL160171 InterPro:IPR005037
PANTHER:PTHR23142 CTD:55119 eggNOG:NOG266713 KO:K12850
OrthoDB:EOG4NKBWJ EMBL:AK001192 EMBL:BC007757 EMBL:BC016296
EMBL:BC024275 EMBL:BC040127 EMBL:BC053838 EMBL:BC107801
EMBL:BC130346 EMBL:BC132963 EMBL:AY211915 IPI:IPI00018098
IPI:IPI00647851 RefSeq:NP_060531.2 UniGene:Hs.342307
ProteinModelPortal:Q5VTL8 IntAct:Q5VTL8 MINT:MINT-1746333
STRING:Q5VTL8 PhosphoSite:Q5VTL8 DMDM:74746965 PaxDb:Q5VTL8
PRIDE:Q5VTL8 Ensembl:ENST00000370021 Ensembl:ENST00000370022
Ensembl:ENST00000370025 GeneID:55119 KEGG:hsa:55119 UCSC:uc001dvv.4
GeneCards:GC01P109234 HGNC:HGNC:25512 neXtProt:NX_Q5VTL8
PharmGKB:PA142671126 HOVERGEN:HBG101033 InParanoid:Q5VTL8
OMA:SIEPESQ ChiTaRS:PRPF38B GenomeRNAi:55119 NextBio:58764
Bgee:Q5VTL8 CleanEx:HS_PRPF38B Genevestigator:Q5VTL8 Uniprot:Q5VTL8
Length = 546
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 141/213 (66%), Positives = 167/213 (78%)
Query: 9 QQEEEATGN---HPGY--KKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYH 63
QQ+++ G P K+ NVLPLWGNE+TMN+NP+ILTNI SS YFKV LYELKTYH
Sbjct: 24 QQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYH 83
Query: 64 EVLDEVYYKVQHLEPWEKGSRKTSXXXXXXXXXXXXXXXXXXSTAFCLLYKLFTLKMTRK 123
EV+DE+Y+KV H+EPWEKGSRKT+ STAFCLLYKLFTLK+TRK
Sbjct: 84 EVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRK 143
Query: 124 QLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTIGNM 183
Q+ GLI HTDSPYIR LGFMYIRYTQPP DLWDW+E +L+DEE++DVKAGGG VMTIG M
Sbjct: 144 QVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEM 203
Query: 184 LRSFLTKLEWHGTLFPRIPVPIQQKLEKQMSAK 216
LRSFLTKLEW TLFPRIPVP+Q+ +++Q+ +
Sbjct: 204 LRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTR 236
>RGD|1562940 [details] [associations]
symbol:Prpf38b "PRP38 pre-mRNA processing factor 38 (yeast)
domain containing B" species:10116 "Rattus norvegicus" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] RGD:1562940
Pfam:PF03371 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GeneTree:ENSGT00700000104061 InterPro:IPR005037 PANTHER:PTHR23142
CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682 KO:K12850
OrthoDB:EOG4NKBWJ OMA:SIEPESQ EMBL:BC079264 IPI:IPI00389442
RefSeq:NP_001019476.1 UniGene:Rn.7210 ProteinModelPortal:Q6AXY7
PRIDE:Q6AXY7 Ensembl:ENSRNOT00000027738 GeneID:499691
KEGG:rno:499691 UCSC:RGD:1562940 InParanoid:Q6AXY7 NextBio:703698
Genevestigator:Q6AXY7 Uniprot:Q6AXY7
Length = 542
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 141/213 (66%), Positives = 167/213 (78%)
Query: 9 QQEEEATGN---HPGY--KKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYH 63
QQ+++ G P K+ NVLPLWGNE+TMN+NP+ILTNI SS YFKV LYELKTYH
Sbjct: 24 QQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYH 83
Query: 64 EVLDEVYYKVQHLEPWEKGSRKTSXXXXXXXXXXXXXXXXXXSTAFCLLYKLFTLKMTRK 123
EV+DE+Y+KV H+EPWEKGSRKT+ STAFCLLYKLFTLK+TRK
Sbjct: 84 EVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRK 143
Query: 124 QLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTIGNM 183
Q+ GLI HTDSPYIR LGFMYIRYTQPP DLWDW+E +L+DEE++DVKAGGG VMTIG M
Sbjct: 144 QVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEM 203
Query: 184 LRSFLTKLEWHGTLFPRIPVPIQQKLEKQMSAK 216
LRSFLTKLEW TLFPRIPVP+Q+ +++Q+ +
Sbjct: 204 LRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTR 236
>MGI|MGI:1914171 [details] [associations]
symbol:Prpf38b "PRP38 pre-mRNA processing factor 38 (yeast)
domain containing B" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] MGI:MGI:1914171
Pfam:PF03371 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
EMBL:AL671894 GeneTree:ENSGT00700000104061 InterPro:IPR005037
PANTHER:PTHR23142 CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682
KO:K12850 OrthoDB:EOG4NKBWJ OMA:SIEPESQ ChiTaRS:PRPF38B
EMBL:AK003895 EMBL:AK015938 EMBL:AK018126 EMBL:BC050900
EMBL:BC052077 IPI:IPI00320636 RefSeq:NP_080121.1 UniGene:Mm.51049
ProteinModelPortal:Q80SY5 STRING:Q80SY5 PhosphoSite:Q80SY5
PaxDb:Q80SY5 PRIDE:Q80SY5 Ensembl:ENSMUST00000029480 GeneID:66921
KEGG:mmu:66921 UCSC:uc008qzx.1 InParanoid:Q80SY5 NextBio:323021
Bgee:Q80SY5 Genevestigator:Q80SY5 Uniprot:Q80SY5
Length = 542
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 137/195 (70%), Positives = 160/195 (82%)
Query: 22 KKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYHEVLDEVYYKVQHLEPWEK 81
K+ NVLPLWGNE+TMN+NP+ILTNI SS YFKV LYELKTYHEV+DE+Y+KV H+EPWEK
Sbjct: 43 KQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEK 102
Query: 82 GSRKTSXXXXXXXXXXXXXXXXXXSTAFCLLYKLFTLKMTRKQLNGLINHTDSPYIRGLG 141
GSRKT+ STAFCLLYKLFTLK+TRKQ+ GLI HTDSPYIR LG
Sbjct: 103 GSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALG 162
Query: 142 FMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTIGNMLRSFLTKLEWHGTLFPRI 201
FMYIRYTQPP DLWDW+E +L+DEE++DVKAGGG VMTIG MLRSFLTKLEW TLFPRI
Sbjct: 163 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 222
Query: 202 PVPIQQKLEKQMSAK 216
PVP+Q+ +++Q+ +
Sbjct: 223 PVPVQKNIDQQIKTR 237
>ZFIN|ZDB-GENE-040426-2878 [details] [associations]
symbol:prpf38b "PRP38 pre-mRNA processing factor
38 (yeast) domain containing B" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] Pfam:PF03371 ZFIN:ZDB-GENE-040426-2878
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 InterPro:IPR005037
PANTHER:PTHR23142 EMBL:BC061448 IPI:IPI00734997 RefSeq:NP_998654.1
UniGene:Dr.2143 ProteinModelPortal:Q6P7Y3 GeneID:406810
KEGG:dre:406810 CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682
InParanoid:Q6P7Y3 KO:K12850 OrthoDB:EOG4NKBWJ NextBio:20818319
ArrayExpress:Q6P7Y3 Uniprot:Q6P7Y3
Length = 501
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 136/209 (65%), Positives = 164/209 (78%)
Query: 8 EQQEEEATGNHPGYKKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYHEVLD 67
+QQ+++A G K N LPLWGNE+TMN+NP+ILTN+ SS YFKV LYELKTYHEV+D
Sbjct: 6 QQQQQQAVSKPTGGKHGNNLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHEVVD 65
Query: 68 EVYYKVQHLEPWEKGSRKTSXXXXXXXXXXXXXXXXXXSTAFCLLYKLFTLKMTRKQLNG 127
E+Y+KV H+EPWEKGSRKT+ STAFCLLYKLFTLK+TRKQ+ G
Sbjct: 66 EIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMG 125
Query: 128 LINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTIGNMLRSF 187
LI H+DSP IR LGFMYIRYTQPP DL DWY+ +L+DEEE+DVKAGGG VMT+G MLRSF
Sbjct: 126 LITHSDSPDIRALGFMYIRYTQPPPDLVDWYDEFLDDEEELDVKAGGGCVMTVGEMLRSF 185
Query: 188 LTKLEWHGTLFPRIPVPIQQKLEKQMSAK 216
LTKLEW TLFPRIPVP+Q+ +++ M ++
Sbjct: 186 LTKLEWFSTLFPRIPVPVQKAIDQHMKSR 214
>FB|FBgn0030468 [details] [associations]
symbol:CG1622 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] Pfam:PF03371
GO:GO:0071011 GO:GO:0000398 InterPro:IPR005037 PANTHER:PTHR23142
eggNOG:NOG266713 EMBL:AY122136 STRING:Q8MR43 PaxDb:Q8MR43
PRIDE:Q8MR43 FlyBase:FBgn0030468 InParanoid:Q8MR43
OrthoDB:EOG4547FT ArrayExpress:Q8MR43 Bgee:Q8MR43 Uniprot:Q8MR43
Length = 418
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 132/210 (62%), Positives = 165/210 (78%)
Query: 4 EDYNEQQEEEATGNHPGYKKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYH 63
EDY+ A G K++N LP WGNE +MN+N LIL NIQSS YFKV+L++LKTYH
Sbjct: 3 EDYSASSS--AGGGKKAGKQHNTLPFWGNESSMNLNALILANIQSSSYFKVHLFKLKTYH 60
Query: 64 EVLDEVYYKVQHLEPWEKGSRKTSXXXXXXXXXXXXXXXXXXSTAFCLLYKLFTLKMTRK 123
EV+DE+YY+V+H+EPWE+GSRKTS STA+CLLYKL+TL++TRK
Sbjct: 61 EVVDEIYYQVKHMEPWERGSRKTSGQTGMCGGVRGVGAGGIVSTAYCLLYKLYTLRLTRK 120
Query: 124 QLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTIGNM 183
Q+NGL+NHTDS YIR LGFMY+RYTQPP DL+DWYE YL+DEEE+DVKAGGGQV+TIG M
Sbjct: 121 QINGLLNHTDSAYIRALGFMYLRYTQPPGDLYDWYEDYLQDEEEIDVKAGGGQVLTIGQM 180
Query: 184 LRSFLTKLEWHGTLFPRIPVPIQQKLEKQM 213
+ F+TKL+W TLFPRIPVPIQ+++EK++
Sbjct: 181 VYQFMTKLDWFSTLFPRIPVPIQKQIEKRI 210
>WB|WBGene00022434 [details] [associations]
symbol:Y108G3AL.2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF03371
EMBL:FO081768 GeneTree:ENSGT00700000104061 InterPro:IPR005037
PANTHER:PTHR23142 eggNOG:NOG266713 KO:K12850 RefSeq:NP_503148.1
ProteinModelPortal:Q95Y35 STRING:Q95Y35 PaxDb:Q95Y35
EnsemblMetazoa:Y108G3AL.2 GeneID:178546 KEGG:cel:CELE_Y108G3AL.2
UCSC:Y108G3AL.2 CTD:178546 WormBase:Y108G3AL.2 HOGENOM:HOG000110751
InParanoid:Q95Y35 OMA:NIRESYY NextBio:901576 Uniprot:Q95Y35
Length = 327
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 105/213 (49%), Positives = 156/213 (73%)
Query: 5 DYNEQQE-EEATGNHPGYKKNNVLPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYH 63
+Y E++E E+ G + G K++N LP+WGN+ TMN+N L+L NI+ S+Y+K NL E+ +
Sbjct: 33 NYGEEEEYEDEEGTYKG-KRSNTLPVWGNKVTMNLNTLVLENIRESYYYKNNLVEIDNFQ 91
Query: 64 EVLDEVYYKVQHLEPWEKGSRKTSXXXXXXXXXXXXXXXXXXSTAFCLLYKLFTLKMTRK 123
++++++Y+V+HLEPWEKG+R+ S+A+CLLY+LF LK++RK
Sbjct: 92 TLIEQIFYQVKHLEPWEKGTRRLQGMTGMCGGVRGVGAGGVVSSAYCLLYRLFNLKISRK 151
Query: 124 QLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDEEEVDVKAGGGQVMTIGNM 183
QL ++N S YIRGLGFMYIRYTQPPADLW W EPYL+D+ E+D ++GGG +MT G +
Sbjct: 152 QLISMLNSRQSVYIRGLGFMYIRYTQPPADLWYWLEPYLDDDREIDPRSGGGDLMTFGQL 211
Query: 184 LRSFLTKLEWHGTLFPRIPVPIQQKLEKQMSAK 216
+R+ + KL+W+GTLFPRIPVPIQ+ ++++ S +
Sbjct: 212 VRTMINKLDWYGTLFPRIPVPIQKDIDEKFSER 244
>TAIR|locus:2169160 [details] [associations]
symbol:ATSRL1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006396 "RNA processing"
evidence=ISS] [GO:0009651 "response to salt stress"
evidence=IGI;IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] Pfam:PF03371 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009651 InterPro:IPR005037
PANTHER:PTHR23142 KO:K12850 OMA:HTDSAYI EMBL:AY093216 EMBL:BT008856
IPI:IPI00516946 RefSeq:NP_851101.1 UniGene:At.24006
ProteinModelPortal:Q8RWB1 PRIDE:Q8RWB1 EnsemblPlants:AT5G37370.1
GeneID:833711 KEGG:ath:AT5G37370 TAIR:At5g37370
HOGENOM:HOG000029043 InParanoid:Q8RWB1 PhylomeDB:Q8RWB1
ProtClustDB:CLSN2918313 ArrayExpress:Q8RWB1 Genevestigator:Q8RWB1
Uniprot:Q8RWB1
Length = 393
Score = 310 (114.2 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 106 STAFCLLYKLFTLKMTRKQLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDE 165
STA+CLLYK FT+K+T KQ++GL+ HTDSPYIR +GF+Y+RY LW WYEPY++D+
Sbjct: 64 STAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDD 123
Query: 166 EEVDVKAGGGQVMTIGNMLRSFLTKLEWHGTLFPRIPVPIQQKL 209
EE G++ T+G +R L L + TLFPRIPVP+ +++
Sbjct: 124 EEFS-PGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQI 166
Score = 133 (51.9 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 38 MNPLILTNIQSSHYFKVNLYELKTYHEVLDEVYYKVQHLEPWEKGS 83
+ ++ NI SS YFK LY LKTYHEV+DE+Y +V H+EPW G+
Sbjct: 15 LEKVLSMNILSSDYFK-ELYGLKTYHEVIDEIYNQVNHVEPWMGGN 59
>DICTYBASE|DDB_G0288401 [details] [associations]
symbol:prpf38b "putative U4/U6.U5 small nuclear
ribonucleoparticle-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] dictyBase:DDB_G0288401
Pfam:PF03371 GenomeReviews:CM000154_GR EMBL:AAFI02000111
InterPro:IPR005037 PANTHER:PTHR23142 eggNOG:NOG266713 KO:K12850
RefSeq:XP_636730.2 EnsemblProtists:DDB0233546 GeneID:8626607
KEGG:ddi:DDB_G0288401 OMA:TERERND Uniprot:Q54J00
Length = 418
Score = 281 (104.0 bits), Expect = 9.0e-38, Sum P(2) = 9.0e-38
Identities = 52/108 (48%), Positives = 72/108 (66%)
Query: 106 STAFCLLYKLFTLKMTRKQLNGLINHTDSPYIRGLGFMYIRYTQPPADLWDWYEPYLEDE 165
ST FCLLYK F +K+T KQ+ GL+ + +SPYIR +G +Y+RY PPA+LWDWY YL+D+
Sbjct: 62 STTFCLLYKFFLMKLTVKQMKGLLGNNESPYIRAIGALYLRYCHPPANLWDWYVDYLDDQ 121
Query: 166 EEVDVKAGGGQVMTIGNMLRSFLTKLEWHGTLFPRIPVPIQQKLEKQM 213
E V + +TI L L ++ GT+ PRIP IQQ L+K++
Sbjct: 122 ETVFISKN--TEVTIQRFLLDLLKDNKFSGTVLPRIPTKIQQDLDKKI 167
Score = 141 (54.7 bits), Expect = 9.0e-38, Sum P(2) = 9.0e-38
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 27 LPLWGNERTMNMNPLILTNIQSSHYFKVNLYELKTYHEVLDEVYYKVQHLEPWEKGSRKT 86
L +GNE++MN++ ++LTNIQSS YFK NLY ++YHEV++E+ V+ L P+ ++
Sbjct: 3 LETFGNEKSMNLDNVLLTNIQSSLYFK-NLYPKRSYHEVIEEIKRNVEILAPYIPNTKTP 61
Query: 87 S 87
S
Sbjct: 62 S 62
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 346 250 0.00080 114 3 11 23 0.37 34
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 616 (65 KB)
Total size of DFA: 217 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.22u 0.08s 19.30t Elapsed: 00:00:11
Total cpu time: 19.22u 0.08s 19.30t Elapsed: 00:00:12
Start: Thu Aug 15 11:19:59 2013 End: Thu Aug 15 11:20:11 2013