RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16259
(896 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 226 bits (579), Expect = 3e-69
Identities = 90/188 (47%), Positives = 116/188 (61%)
Query: 502 SFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTR 561
S GE P+ C C K+F+R +HL H R HTGE P+KC C KSF+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 562 KEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHL 621
K+ L H R HTG+ P+KC C KSF+++ +L H R HTGE PY C C K+FS+ HL
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 622 VNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHI 681
H R HTGE P+KC C +SF+R+D+L+ H R HTGE P+KC C KSF+R++ LN H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 682 RLHTGESP 689
R HTG+
Sbjct: 182 RTHTGKKT 189
Score = 226 bits (579), Expect = 4e-69
Identities = 84/186 (45%), Positives = 115/186 (61%)
Query: 530 TFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTR 589
+ + GE P+ C C KSF+R +HL H R HTG+ P+KC C KSF+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 590 KEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHL 649
K+ L H R HTGE PY+C C K+FS++ +L H R HTGE P+ C C +SF++ HL
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 650 NNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHL 709
H R HTGE P+KC C KSF+R+++L+ H R HTGE P+KC C K+F+R++ L H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 710 KQHAGE 715
+ H G+
Sbjct: 182 RTHTGK 187
Score = 220 bits (562), Expect = 8e-67
Identities = 82/188 (43%), Positives = 111/188 (59%)
Query: 558 SFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSR 617
S V G+ P+ C C KSF+R +HL H R HTGE PY+C C K+FS
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 618 KDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHL 677
K L H R HTGE P+KC C +SF+++ +L H R HTGE P+ C C KSF++ HL
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 678 NNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHS 737
H R HTGE P+KC C K+F+R+++L H + H GE + C C K F +++ L H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 738 RSHTGERP 745
R+HTG++
Sbjct: 182 RTHTGKKT 189
Score = 218 bits (557), Expect = 4e-66
Identities = 84/186 (45%), Positives = 111/186 (59%)
Query: 476 TRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKE 535
+ P+ C C KSF+R +H H HTGE P++C C K+F+ K+
Sbjct: 4 FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
L H R HTGE P+KC C KSF+++ +L H R HTG+ P+ C C KSF++ HL
Sbjct: 64 DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA 123
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRL 655
H R HTGE PY+C C K+FSR+D+L H R HTGE P+KC C +SF+R+D LN H R
Sbjct: 124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183
Query: 656 HTGESP 661
HTG+
Sbjct: 184 HTGKKT 189
Score = 216 bits (552), Expect = 2e-65
Identities = 83/183 (45%), Positives = 108/183 (59%)
Query: 586 SFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTR 645
S V GE PY C C K+FSR DHL H R HTGE P+KC C +SF+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 646 KDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHL 705
K L H R HTGE P+KC C KSF+++ +L H R HTGE P+ C C K+F++ HL
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 706 TNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQ 765
H + H GE + C C K F ++++L H R+HTGE+P+ C +CGKSF + L HQ
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 766 RSH 768
R+H
Sbjct: 182 RTH 184
Score = 211 bits (541), Expect = 8e-64
Identities = 85/188 (45%), Positives = 115/188 (61%)
Query: 446 AFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTR 505
+ V GE P+ C CGK ++R +HLA H R+HT + P+KC C KSF+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 506 KEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHL 565
K+ T H HTGE P++C C K+F+++ +L H R HTGE P+ C C KSF++ HL
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 566 VNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHV 625
H R HTG+ P+KC C KSF+R+++L H R HTGE PY+C C K+FSR+D L H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 626 RQHTGESP 633
R HTG+
Sbjct: 182 RTHTGKKT 189
Score = 206 bits (526), Expect = 1e-61
Identities = 82/216 (37%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 390 TFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTR 449
+ GE PY C CGK+FSR +H+ H R HTGE P++C C K+F+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 450 KEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHF 509
K+ H HTGE P+ C CGK ++++ +L H R+
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT---------------------- 99
Query: 510 TNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHV 569
HTGE P+ C C K+F++ HL H R HTGE P+KC C KSF+R+++L H
Sbjct: 100 ------HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ 153
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETP 605
R HTG+ P+KC C KSF+R++ L H R HTG+
Sbjct: 154 RTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 191 bits (488), Expect = 2e-56
Identities = 78/187 (41%), Positives = 111/187 (59%)
Query: 363 FANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRK 422
S ++PY C C K+F+R +HL H R HTGE PYKC CGK+FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 423 EHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLA 482
+ + H R HTGE P++C C K+F+++ + H HTGE P+ C CGK +++ HL
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVR 542
H R+HT + P+KC C KSF+R+++ H HTGE P++C C K+F+R++ L H R
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 543 QHTGESP 549
HTG+
Sbjct: 183 THTGKKT 189
Score = 188 bits (480), Expect = 3e-55
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 7/191 (3%)
Query: 642 SFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTR 701
S L GE P+ C C KSF+R +HL H R HTGE P+KC C K+F+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 702 KEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNL 761
K+ LT H + H GE + C C K F ++ +L H R+HTGE+P+AC +CGKSF +L
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 762 LFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHT 821
HQR+H E+P+KC C K F+ + +L +H R+H E+P+ CP C KSF
Sbjct: 122 RAHQRTHTG------EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD 175
Query: 822 CMIKHIRKNHT 832
+ H R HT
Sbjct: 176 ALNVHQRT-HT 185
Score = 165 bits (421), Expect = 3e-47
Identities = 69/183 (37%), Positives = 102/183 (55%)
Query: 307 FPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANE 366
+ KP+ C CGK+F L H + H G Y C C F+++
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 367 ESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMV 426
+ L RH + H+ ++PY C C K+F+++ +L H R HTGE PY C CGK+FS+ H+
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMR 486
H R HTGE P++C C K+F+R+++ H HTGE P+ C CGK ++R++ L H R
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 487 SHT 489
+HT
Sbjct: 183 THT 185
Score = 128 bits (325), Expect = 3e-34
Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 28/168 (16%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCA 357
+ C CGK F + + H+R HT KP+ C CGK+F +A L +H + H G
Sbjct: 50 YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG------- 102
Query: 358 VCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGK 417
++PY C C K+F++ HL H R HTGE PYKC CGK
Sbjct: 103 ---------------------EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 418 NFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETP 465
+FSR++++ H R HTGE P++C C K+F+R++ H HTG+
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 174 bits (443), Expect = 3e-50
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 12/186 (6%)
Query: 538 LNHVRQHTGESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHL 593
+ + C++ C ++ + L H+ +HTG+ P C C K FT HL
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 594 VNHVRQHTGETPYQC--QYCPKAFSRKDHLVNHVRQHTGE--SPHKCSY--CKQSFTRKD 647
H HTGE + C C F+ K ++ H + + C + C ++F + +
Sbjct: 61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120
Query: 648 HLNNHVRLHTGESPHKCH--FCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHL 705
L H HT + P++C C K F+ L H ++H G K D C
Sbjct: 121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180
Query: 706 TNHLKQ 711
H+ +
Sbjct: 181 LKHVAE 186
Score = 169 bits (431), Expect = 1e-48
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 12/184 (6%)
Query: 483 NHMRSHTNDTPFKCEI--CTKSFTRKEHFTNHIMWHTGETPHRCD--FCSKTFTRKEHLL 538
+ C C ++ + H+ HTGE P C C K FT HL
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 539 NHVRQHTGESPHKCN--YCAKSFTRKEHLVNHVRQHTG--DSPHKCNY--CAKSFTRKEH 592
H HTGE C+ C FT K ++ H + + C++ C K+F +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 593 LVNHVRQHTGETPYQC--QYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLN 650
L H HT + PY+C + C K FS L H + H G K C
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Query: 651 NHVR 654
HV
Sbjct: 182 KHVA 185
Score = 160 bits (408), Expect = 2e-45
Identities = 47/185 (25%), Positives = 63/185 (34%), Gaps = 12/185 (6%)
Query: 594 VNHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHL 649
+ Y C + C A+++ L H+ +HTGE P C C++ FT HL
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 650 NNHVRLHTGESPHKC--HFCSKSFTRKEHLNNHIRLHTGE--SPHKCDF--CLKTFTRKE 703
H HTGE C C FT K ++ H + C F C K F +
Sbjct: 61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120
Query: 704 HLTNHLKQHAGETEHVCN--ICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNL 761
L H H + + C C K F L H + H G C
Sbjct: 121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180
Query: 762 LFHQR 766
L H
Sbjct: 181 LKHVA 185
Score = 144 bits (365), Expect = 1e-39
Identities = 51/197 (25%), Positives = 77/197 (39%), Gaps = 24/197 (12%)
Query: 651 NHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCD--FCLKTFTRKEHLT 706
L + C F C ++ + L H+ HTGE P C C K FT HLT
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 707 NHLKQHAGETEHVCN--ICSKPFLKKEHLVNHSRSHTGER--PFACT--DCGKSFPLKGN 760
H H GE C+ C F K ++ H + + C +CGK+F
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 761 LLFHQRSHRKQNGEVLERPFKC--DVCPKDFTCKGHLVSHLRSH---LNERPHVCPHCSK 815
L HQ SH + + P++C + C K F+ L H + H ++ C K
Sbjct: 122 LKVHQFSHTQ------QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGK 175
Query: 816 SFVEHTCMIKHIRKNHT 832
++ + KH+ + H
Sbjct: 176 TWTLYL---KHVAECHQ 189
Score = 132 bits (335), Expect = 1e-35
Identities = 45/211 (21%), Positives = 71/211 (33%), Gaps = 40/211 (18%)
Query: 314 IVHRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQR 371
+ + K + C CG A+ LQ
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAY----------------------------NKNWKLQA 32
Query: 372 HTKRHSIDRPYCCS--VCMKTFARKEHLENHTRCHTGETPYKC--QYCGKNFSRKEHMVN 427
H +H+ ++P+ C C K F HL H+ HTGE + C C F+ K +M
Sbjct: 33 HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 92
Query: 428 HVRKHTGE--TPHRCEI--CKKAFTRKEHYVNHVMWHTGETPHVC--QVCGKKYTRKEHL 481
H + + C C KAF + H HT + P+ C + C K+++ L
Sbjct: 93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRL 152
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNH 512
H + H K + C+ + H
Sbjct: 153 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183
Score = 113 bits (286), Expect = 4e-29
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 10/164 (6%)
Query: 303 CGKFFPYRYQMIVHRRYHTERKPFTCH--VCGKAFDFQAELMSHGKCHLGGSMYTC--AV 358
CG + +++ H HT KPF C C K F L H H G +TC
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 359 CFHVFANEESLQRHTKRHS--IDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKC-- 412
C F + ++++H R Y C C K F + L+ H HT + PY+C
Sbjct: 80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 413 QYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNH 456
+ C K FS + H + H G + + C Y+ H
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183
Score = 85.0 bits (211), Expect = 5e-19
Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Query: 303 CGKFFPYRYQMIVHRRYHTERKPFTC--HVCGKAFDFQAELMSHGKCHLG--GSMYTCAV 358
C K F + + H HT K FTC C F +A + H +Y C
Sbjct: 50 CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHF 109
Query: 359 --CFHVFANEESLQRHTKRHSIDRPYCCS--VCMKTFARKEHLENHTRCHTGETPYK--- 411
C F L+ H H+ PY C C K F+ L+ H + H G K
Sbjct: 110 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDS 169
Query: 412 CQYCGKNFSRKEHMVNHVRKHT 433
C + GK ++ ++ + H
Sbjct: 170 CSFVGKTWT--LYLKHVAECHQ 189
Score = 30.3 bits (69), Expect = 1.9
Identities = 6/39 (15%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 796 VSHLRSHLNERPHVC--PHCSKSFVEHTCMIKHIRKNHT 832
+ + + ++C C ++ ++ + H+ K HT
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HT 38
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 151 bits (384), Expect = 9e-43
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 519 ETPHRCDFCSKTFTRKEHLLNHVRQ---HTGESPHKCNYC-----AKSFTRKEHLVNHVR 570
ET R D CS+ F +E L++H+ H C++ + F + LV H+R
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 571 QHTGDSPHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQY--CPKAFSRKDHLVNH-V 625
+HTG+ PHKC + C KS++R E+L H+R HTGE PY C++ C KAFS H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 626 RQHTGESPHKCSY--CKQSFTRKDHLNNHVRLHTG 658
R H+ E P+ C C + +T L HV+ G
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 141 bits (358), Expect = 4e-39
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 407 ETPYKCQYCGKNFSRKEHMVNHVRK---HTGETPHRCEIC-----KKAFTRKEHYVNHVM 458
ET + C + F +E +V+H+ H C + F + V H+
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 459 WHTGETPHVCQV--CGKKYTRKEHLANHMRSHTNDTPFKCE--ICTKSFTRKEHFTNHIM 514
HTGE PH C C K Y+R E+L H+RSHT + P+ CE C+K+F+ H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 515 W-HTGETPHRCDF--CSKTFTRKEHLLNHVRQHTG 546
H+ E P+ C C+K +T L HV+ G
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 140 bits (355), Expect = 1e-38
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 603 ETPYQCQYCPKAFSRKDHLVNHVRQ---HTGESPHKCSYC-----KQSFTRKDHLNNHVR 654
ET + C + F ++ LV+H+ H C + + F + L H+R
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 655 LHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCDF--CLKTFTRKEHLTNHLK 710
HTGE PHKC F C KS++R E+L H+R HTGE P+ C+ C K F+ H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 711 Q-HAGETEHVCNI--CSKPFLKKEHLVNHSRSHTG 742
+ H+ E +VC + C+K + L H ++ G
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 123 bits (312), Expect = 5e-33
Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 33/176 (18%)
Query: 324 KPFTCHVCGKAFDFQAELMSHGKC---HLGGSMYTCAVCFHVFANEESLQRHTKRHSIDR 380
C + FD Q +L+ H H + C
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG--------------------- 40
Query: 381 PYCCSVCMKTFARKEHLENHTRCHTGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPH 438
CS ++ F + L H R HTGE P+KC + C K++SR E++ H+R HTGE P+
Sbjct: 41 --GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY 98
Query: 439 RCE--ICKKAFTRKEHYVNHVMW-HTGETPHVCQV--CGKKYTRKEHLANHMRSHT 489
CE C KAF+ H H+ E P+VC++ C K+YT L H+++
Sbjct: 99 MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 118 bits (299), Expect = 3e-31
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 40/184 (21%)
Query: 659 ESPHKCHFCSKSFTRKEHLNNHI---RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
E+ + CS+ F +E L +HI +H C +
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------- 41
Query: 716 TEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT--DCGKSFPLKGNLLFHQRSHRKQNG 773
C+ +PF + LV H R HTGE+P CT C KS+ NL H RSH G
Sbjct: 42 ----CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH---TG 94
Query: 774 EVLERPFKC--DVCPKDFTCKGHLVSH-LRSHLNERPHVC--PHCSKSFVEHTCMIKHIR 828
E +P+ C + C K F+ H R+H NE+P+VC P C+K + + + + KH++
Sbjct: 95 E---KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151
Query: 829 KNHT 832
Sbjct: 152 -TVH 154
Score = 108 bits (272), Expect = 1e-27
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 33/174 (18%)
Query: 299 TCDLCGKFFPYRYQMIVH---RRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYT 355
D C + F + Q++ H H ERK F CH G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------- 41
Query: 356 CAVCFHVFANEESLQRHTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQ 413
C+ F + L H +RH+ ++P+ C+ C K+++R E+L+ H R HTGE PY C+
Sbjct: 42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101
Query: 414 Y--CGKNFSRKEHMVNH-VRKHTGETPHRCEI--CKKAFTRKEHYVNHVMWHTG 462
+ C K FS H R H+ E P+ C++ C K +T HV G
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 149 bits (378), Expect = 3e-42
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQ---H 600
+G S +C C K F K +L H R+HTG+ P +C C K + RKE+L+ H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 601 TGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNH-VRLHTGE 659
E + C C + F R+ L H+ HTGE P+KCS C Q F +K L +H ++LH+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Score = 143 bits (364), Expect = 2e-40
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQ---H 572
+G + C C K F K +L H R+HTGE P +C C K + RKE+L+ H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 573 TGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNH-VRQHTGE 631
+ C+ C ++F R+ L H+ HTGE PY+C C + F +K L +H ++ H+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Score = 131 bits (332), Expect = 4e-36
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQ---H 544
+ + +C C K F K + H HTGE P C C K + RKE+LL H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 545 TGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNH-VRQHTGE 603
E C+ C ++F R+ L H+ HTG+ P+KC+ C++ F +K+ L +H ++ H+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Score = 129 bits (327), Expect = 2e-35
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNH---VMWH 460
+G + +C C K F K ++ H RKHTGE P C C K + RKE+ + H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 461 TGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMW-HTGE 519
E C VC + + R+ L HM SHT + P+KC C++ F +K+ +H++ H+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Score = 129 bits (327), Expect = 2e-35
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRL---H 684
+G S +C C + F K +L H R HTGE P +C C K + RKE+L H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 685 TGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNH-SRSHTGE 743
E C C +TF R+ L H+ H GE + C+ CS+ F++K+ L +H + H+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Query: 744 R 744
Sbjct: 122 S 122
Score = 114 bits (287), Expect = 5e-30
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQ 771
+G + C C K FL K +L H+R HTGE+PF C CGK + K NLL H+ +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 772 NGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNH 831
E+ F C VC + F + L H+ SH E P+ C CS+ F++ + H+ K H
Sbjct: 62 RS---EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Query: 832 T 832
+
Sbjct: 119 S 119
Score = 108 bits (272), Expect = 5e-28
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 299 TCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAV 358
C C K F +Y + VH R HT KPF C CGK + + L+ H
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-------------- 54
Query: 359 CFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKN 418
+ + ++ + CSVC +TF R+ L H HTGE PYKC C +
Sbjct: 55 -----------EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQ 103
Query: 419 FSRKEHMVNH-VRKHTGE 435
F +K+ + +H ++ H+G
Sbjct: 104 FMQKKDLQSHMIKLHSGP 121
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 149 bits (378), Expect = 6e-42
Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 23/171 (13%)
Query: 527 CSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKS 586
+ + L+ + C ++F+ LV HV P + N+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY- 61
Query: 587 FTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFT 644
+C K+F K LVNH+R HTGE P C + C + F
Sbjct: 62 ------------------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA 103
Query: 645 RKDHLNNHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCD 693
R ++L H R HTGE P KC F C + F H+ +HT +
Sbjct: 104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 144 bits (366), Expect = 3e-40
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 499 CTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHK------- 551
S + + + C +TF+ L+ HV P +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 552 --CNYCAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQ 607
C KSF K LVNH+R HTG+ P C + C K F R E+L H R HTGE P++
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 608 CQY--CPKAFSRKDHLVNHVRQHTGESPHKCS 637
C++ C + F+ H+ HT + S
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 143 bits (363), Expect = 7e-40
Identities = 45/178 (25%), Positives = 61/178 (34%), Gaps = 37/178 (20%)
Query: 583 CAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHK------- 635
S + ++ + + C + FS LV HV P +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 636 --CSYCKQSFTRKDHLNNHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHK 691
C +SF K L NH+R+HTGE P C F C K F R E+L H R HTGE P K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 692 CDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
C+F C + F H HT ++ +
Sbjct: 123 CEF--------------------------EGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 135 bits (342), Expect = 4e-37
Identities = 39/172 (22%), Positives = 59/172 (34%), Gaps = 26/172 (15%)
Query: 389 KTFARKEHLENHTRC---HTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKK 445
+ + + ++ C + + C + FS +V HV P +
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 446 AFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEI--CTKSF 503
C GK + K L NH+R HT + PF C C K F
Sbjct: 62 -------------------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102
Query: 504 TRKEHFTNHIMWHTGETPHRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCN 553
R E+ H HTGE P +C+F C + F H+ HT + +
Sbjct: 103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 128 bits (323), Expect = 2e-34
Identities = 39/151 (25%), Positives = 52/151 (34%), Gaps = 13/151 (8%)
Query: 359 CFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYK------- 411
+ C +TF+ L H P +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 412 --CQYCGKNFSRKEHMVNHVRKHTGETPHRCEI--CKKAFTRKEHYVNHVMWHTGETPHV 467
C GK+F K +VNH+R HTGE P C C K F R E+ H HTGE P
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 468 CQV--CGKKYTRKEHLANHMRSHTNDTPFKC 496
C+ C +++ HM HT+D
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 120 bits (302), Expect = 1e-31
Identities = 42/170 (24%), Positives = 59/170 (34%), Gaps = 23/170 (13%)
Query: 303 CGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHV 362
G Q + + + C + F EL++H G +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY- 61
Query: 363 FANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQY--CGKNFS 420
C K+F K L NH R HTGE P+ C + CGK F+
Sbjct: 62 ------------------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA 103
Query: 421 RKEHMVNHVRKHTGETPHRCEI--CKKAFTRKEHYVNHVMWHTGETPHVC 468
R E++ H R HTGE P +CE C + F H+ HT +
Sbjct: 104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 119 bits (301), Expect = 1e-31
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 19/157 (12%)
Query: 667 CSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE---------TE 717
S + + + + C +TF+ L H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 718 HVCNICSKPFLKKEHLVNHSRSHTGERPFACT--DCGKSFPLKGNLLFHQRSHRKQNGEV 775
C K F K LVNH R HTGE+PF C CGK F NL H+R+H G
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH---TG-- 117
Query: 776 LERPFKCDV--CPKDFTCKGHLVSHLRSHLNERPHVC 810
E+PFKC+ C + F H+ H +++
Sbjct: 118 -EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 101 bits (254), Expect = 3e-25
Identities = 35/147 (23%), Positives = 48/147 (32%), Gaps = 19/147 (12%)
Query: 695 CLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFA------- 747
+ + + + C + F LV H P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 748 --CTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDV--CPKDFTCKGHLVSHLRSHL 803
C GKSF K L+ H R H G E+PF C C K F +L H R+H
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVH---TG---EKPFPCPFPGCGKIFARSENLKIHKRTHT 116
Query: 804 NERPHVCPH--CSKSFVEHTCMIKHIR 828
E+P C C + F + KH+
Sbjct: 117 GEKPFKCEFEGCDRRFANSSDRKKHMH 143
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 132 bits (334), Expect = 2e-36
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 598 RQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHT 657
+G+ Y CQ C K+F+ K H+ H G P+ C C + F K HL H+++HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 658 GESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTN 707
G P++C+ C+K F ++ H + + ++ + T ++
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 129 bits (328), Expect = 9e-36
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHT 601
+G+ + C C KSFT K H+ H G P+ C C K F K HLV H++ HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 602 GETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNN 651
G PY+C C K F +D H + ++ + +Q+ T ++
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 129 bits (326), Expect = 2e-35
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
+G+ + C C K+FT K H+ H G P+ C C K F K HLV H++ HTG
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 576 SPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVN 623
P++CN CAK F ++ H + Y+ + + +
Sbjct: 64 KPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 127 bits (323), Expect = 5e-35
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHT 629
+GD + C C KSFT K H+ H G PY C C K F K HLV H++ HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 630 GESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNN 679
G P++C+ C + F +D H + + ++ ++ T ++
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 121 bits (306), Expect = 9e-33
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 485 MRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQH 544
+ D + C+ C KSFT K H+ H G P+ C C K F K HL+ H++ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 545 TGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
TG P++CN CAK F ++ H + ++ ++ T +
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 116 bits (294), Expect = 4e-31
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
+G+ + CQ CGK +T K HM H P+ C +C K F K H H+ HTG
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 520 TPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVN 567
P+ C+ C+K F ++ H + ++ ++ T +
Sbjct: 64 KPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 116 bits (292), Expect = 8e-31
Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 31/136 (22%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHT 685
+G+ + C C +SFT K + H+ +H G P+ C C K F K HL H+++HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 686 GESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERP 745
G P++C+ C K F ++ H + +
Sbjct: 62 GIKPYECNICAKRFMWRDSF------------------------------HRHVTSCTKS 91
Query: 746 FACTDCGKSFPLKGNL 761
+ ++
Sbjct: 92 YEAAKAEQNTTEASGP 107
Score = 115 bits (290), Expect = 1e-30
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 402 RCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHT 461
+G+ Y CQ CGK+F+ K H+ H G P+ C +C K F K H V H+ HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 462 GETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTN 511
G P+ C +C K++ ++ H + ++ ++ T ++
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 113 bits (286), Expect = 4e-30
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
+G+ + C+ C K+FT K H+ H G P+ C VCGKK+ K HL HM+ HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 490 NDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHL 537
P++C IC K F ++ F H+ + + + T
Sbjct: 62 GIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107
Score = 109 bits (275), Expect = 2e-28
Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 37/144 (25%)
Query: 654 RLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHA 713
+G+ + C C KSFT K + H+ +H G P+ C C K F K HL H+
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM---- 57
Query: 714 GETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNG 773
+ HTG +P+ C C K F + + H+ +
Sbjct: 58 ------------------------KIHTGIKPYECNICAKRFMWRDSF--HRHVT---SC 88
Query: 774 EVLERPFKCDVCPKDFTCKGHLVS 797
+ ++ ++ T S
Sbjct: 89 ---TKSYEAAKAEQNTTEASGPSS 109
Score = 109 bits (274), Expect = 2e-28
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
S D+ Y C C K+F K + H H G PY C CGK F K H+V H++ HTG
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 436 TPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLAN 483
P+ C IC K F ++ + HV + + + T ++
Sbjct: 64 KPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPSS 109
Score = 97.5 bits (244), Expect = 2e-24
Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 31/135 (22%)
Query: 318 RYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHS 377
+ K + C CGK+F +++ H HLG
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG--------------------------- 34
Query: 378 IDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETP 437
RPY C VC K F K HL H + HTG PY+C C K F ++ H +
Sbjct: 35 -LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKS 91
Query: 438 HRCEICKKAFTRKEH 452
+ ++ T
Sbjct: 92 YEAAKAEQNTTEASG 106
Score = 93.7 bits (234), Expect = 5e-23
Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 37/136 (27%)
Query: 682 RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHT 741
+G+ + C C K+FT K H+ H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHM----------------------------SMHL 33
Query: 742 GERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRS 801
G RP+ C CGK F +K +L+ H + H G +P++C++C K F + H
Sbjct: 34 GLRPYGCGVCGKKFKMKHHLVGHMKIH---TGI---KPYECNICAKRFMWRDSF--HRHV 85
Query: 802 HLNERPHVCPHCSKSF 817
+ + ++
Sbjct: 86 TSCTKSYEAAKAEQNT 101
Score = 86.3 bits (215), Expect = 2e-20
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 30/122 (24%)
Query: 303 CGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHV 362
CGK F ++ Q H H +P+ C VCGK F + L+ H K H G
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG------------ 62
Query: 363 FANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRK 422
+PY C++C K F ++ H + Y+ +N +
Sbjct: 63 ----------------IKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEA 104
Query: 423 EH 424
Sbjct: 105 SG 106
Score = 85.6 bits (213), Expect = 4e-20
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 737 SRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLV 796
S +G++ + C CGKSF K H H G RP+ C VC K F K HLV
Sbjct: 2 SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMH---LGL---RPYGCGVCGKKFKMKHHLV 54
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
H++ H +P+ C C+K F+ +H+ +
Sbjct: 55 GHMKIHTGIKPYECNICAKRFMWRDSFHRHV---TS 87
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 131 bits (333), Expect = 2e-36
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
+ C +C + FT+ +L+ H R HT + P+ C+ C K+F R++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
H H+ E P++CQ C K F + L H H S +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 129 bits (328), Expect = 9e-36
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 592 HLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNN 651
+ + C++C + F++ +L+ H R HT E P+ C C ++F R+DHL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
H +H+ E P KC C K F + L H LH S
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 127 bits (323), Expect = 5e-35
Identities = 34/101 (33%), Positives = 44/101 (43%)
Query: 564 HLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVN 623
C +C + FT+ +L+ H R HT E PY C C KAF R+DHL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
H H+ E P KC C + F + L H LH S
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 123 bits (312), Expect = 1e-33
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 508 HFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVN 567
+ + + C FC + FT+ +LL H R HT E P+ C+ C K+F R++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
H H+ + P KC C K F + L H H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 118 bits (299), Expect = 7e-32
Identities = 31/102 (30%), Positives = 42/102 (41%)
Query: 480 HLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLN 539
+ F C+ C + FT+ + H HT E P+ CD C K F R++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
H H+ E P KC C K F + L H H S
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 117 bits (296), Expect = 2e-31
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 396 HLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVN 455
+ + C++CG++F++ +++ H R HT E P+ C+IC KAF R++H +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
H H+ E P CQ CGK + + LA H H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 116 bits (293), Expect = 5e-31
Identities = 30/102 (29%), Positives = 44/102 (43%)
Query: 620 HLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNN 679
+ C +C + FT+ +L H R HT E P+ C C K+F R++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
H +H+ E P KC C K F + L H H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 115 bits (290), Expect = 1e-30
Identities = 30/102 (29%), Positives = 41/102 (40%)
Query: 648 HLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTN 707
+ + C FC + FT+ +L H R HT E P+ CD C K F R++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
H H+ E C C K F + L H H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 110 bits (279), Expect = 4e-29
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
+ +C+ CG+ +T+ +L H R+HT++ P+ C+IC K+F R++H +H H+ E
Sbjct: 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE 71
Query: 520 TPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
P +C C K F + L H H S
Sbjct: 72 KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 108 bits (272), Expect = 3e-28
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 676 HLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVN 735
+ + C FC + FT+ +L H + H E + C+IC K F +++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
H H+ E+PF C +CGK F L H+ H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ------TSSPTA 104
Score = 107 bits (269), Expect = 8e-28
Identities = 27/101 (26%), Positives = 41/101 (40%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVN 427
+ + C C + F + +L H R HT E PY C C K F R++H+ +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
H H+ E P +C+ C K F + H H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 103 bits (260), Expect = 2e-26
Identities = 26/101 (25%), Positives = 43/101 (42%)
Query: 424 HMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLAN 483
+ C+ C + FT+ + + H HT E P+ C +C K + R++HL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
H H+ + PFKC+ C K F + H H +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 98.3 bits (246), Expect = 1e-24
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 28/127 (22%)
Query: 314 IVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHT 373
R +K F C CG+ F L+ H + H
Sbjct: 6 SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTD----------------------- 42
Query: 374 KRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
+RPY C +C K F R++HL +H H+ E P+KCQ CGK F + + H H
Sbjct: 43 -----ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97
Query: 434 GETPHRC 440
+
Sbjct: 98 QTSSPTA 104
Score = 91.7 bits (229), Expect = 2e-22
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 732 HLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTC 791
++ F C CG+ F NLL H+R+H E RP+ CD+C K F
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH---TDE---RPYTCDICHKAFRR 57
Query: 792 KGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
+ HL H H E+P C C K F + + H
Sbjct: 58 QDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94
Score = 76.3 bits (189), Expect = 6e-17
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 28/113 (24%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVC 359
C CG+ F Y +++H R HT+ +P+TC +C KAF Q L H H
Sbjct: 20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK--------- 70
Query: 360 FHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
++P+ C C K F + L H H +
Sbjct: 71 -------------------EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 52.1 bits (126), Expect = 2e-08
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+TCD+C K F + + HR H++ KPF C CGK F L H H+ S T
Sbjct: 46 YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 32.8 bits (76), Expect = 0.11
Identities = 5/37 (13%), Positives = 12/37 (32%)
Query: 792 KGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
++ +C C + F + ++ H R
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER 38
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 132 bits (334), Expect = 2e-36
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 601 TGETPYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLH 656
+ + P+ C Y C K + + HL H R+HTGE P++C + C++ F+R D L H R H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 657 TGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDF--CLKTFTRKEHLTNHLKQH 712
TG P +C C + F+R +HL H R HTGE P C + C K F R + L H H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 131 bits (333), Expect = 2e-36
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 545 TGESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQH 600
+ + P C Y C K + + HL H R+HTG+ P++C++ C + F+R + L H R+H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 601 TGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLH 656
TG P+QC+ C + FSR DHL H R HTGE P C + C++ F R D L H +H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 120 bits (303), Expect = 3e-32
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 34/146 (23%)
Query: 629 TGESPHKCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLH 684
+ + P C+Y C + + + HL H R HTGE P++C F C + F+R + L H R H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 685 TGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGER 744
TG P +C C + F+R +HL H R+HTGE+
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHT----------------------------RTHTGEK 93
Query: 745 PFAC--TDCGKSFPLKGNLLFHQRSH 768
PF+C C K F L+ H H
Sbjct: 94 PFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 120 bits (303), Expect = 3e-32
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 493 PFKCE--ICTKSFTRKEHFTNHIMWHTGETPHRCDF--CSKTFTRKEHLLNHVRQHTGES 548
PF C C K + + H H HTGE P++CDF C + F+R + L H R+HTG
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQH 600
P +C C + F+R +HL H R HTG+ P C + C K F R + LV H H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 116 bits (294), Expect = 5e-31
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 380 RPYCCS--VCMKTFARKEHLENHTRCHTGETPYKCQY--CGKNFSRKEHMVNHVRKHTGE 435
RP+ C+ C K + + HL+ H+R HTGE PY+C + C + FSR + + H R+HTG
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 436 TPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQV--CGKKYTRKEHLANHMRSH 488
P +C+ C++ F+R +H H HTGE P C+ C KK+ R + L H H
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 116 bits (294), Expect = 6e-31
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 405 TGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRCEI--CKKAFTRKEHYVNHVMWH 460
+ + P+ C Y C K + + H+ H RKHTGE P++C+ C++ F+R + H H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 461 TGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEI--CTKSFTRKEHFTNHIMWH 516
TG P C+ C +K++R +HL H R+HT + PF C C K F R + H H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 110 bits (277), Expect = 1e-28
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 36/150 (24%)
Query: 657 TGESPHKC--HFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAG 714
+ + P C C+K + + HL H R HTGE P++CDF
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKD------------------ 43
Query: 715 ETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGE 774
C + F + + L H R HTG +PF C C + F +L H R+H G
Sbjct: 44 --------CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH---TG- 91
Query: 775 VLERPFKCDV--CPKDFTCKGHLVSHLRSH 802
E+PF C C K F LV H H
Sbjct: 92 --EKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 98.4 bits (246), Expect = 1e-24
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 714 GETEHVCN--ICSKPFLKKEHLVNHSRSHTGERPFACT--DCGKSFPLKGNLLFHQRSHR 769
+ +C C+K + K HL HSR HTGE+P+ C DC + F L HQR H
Sbjct: 3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH- 61
Query: 770 KQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC--PHCSKSFVEHTCMIKHI 827
G +PF+C C + F+ HL +H R+H E+P C P C K F +++H
Sbjct: 62 --TGV---KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH 116
Query: 828 R 828
Sbjct: 117 N 117
Score = 93.4 bits (233), Expect = 9e-23
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 354 YTC--AVCFHVFANEESLQRHTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGETP 409
+ C C + LQ H+++H+ ++PY C C + F+R + L+ H R HTG P
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 410 YKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEI--CKKAFTRKEHYVNH 456
++C+ C + FSR +H+ H R HTGE P C C+K F R + V H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 86.8 bits (216), Expect = 2e-20
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 32/134 (23%)
Query: 303 CGKFFPYRYQMIVHRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSMYTCAVCF 360
C K + + +H R HT KP+ C C + F
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRF-----------SRSD---------- 52
Query: 361 HVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQY--CGKN 418
L+RH +RH+ +P+ C C + F+R +HL+ HTR HTGE P+ C++ C K
Sbjct: 53 -------QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK 105
Query: 419 FSRKEHMVNHVRKH 432
F+R + +V H H
Sbjct: 106 FARSDELVRHHNMH 119
Score = 76.8 bits (190), Expect = 5e-17
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 741 TGERPFACT--DCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDV--CPKDFTCKGHLV 796
+ +RPF C C K + +L H R H GE +P++CD C + F+ L
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKH---TGE---KPYQCDFKDCERRFSRSDQLK 55
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
H R H +P C C + F + H R HT
Sbjct: 56 RHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR-THT 90
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 131 bits (331), Expect = 6e-36
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 577 PHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
C + C K F + H+ H G + C C KAF L H HTGE P
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 635 KCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPH 690
+C++ C + F+ +L HVR+HTG+ P+ C F C+K F + +L +HI H +
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Query: 691 K 691
+
Sbjct: 124 Q 124
Score = 128 bits (323), Expect = 7e-35
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 547 ESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGET 604
C + C K F + H+ H G H C C K+F L H HTGE
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 605 PYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLHTGES 660
P+QC + C K FS +L HVR HTG+ P+ C + C + F + +L +H+ H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Query: 661 PHK 663
++
Sbjct: 122 NNQ 124
Score = 128 bits (323), Expect = 8e-35
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 519 ETPHRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDS 576
C C+K F + H+ H G H C C K+F L H HTG+
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 577 PHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQHTGES 632
P +C + C K F+ +L HVR HTG+ PY C + C K F++ +L +H+ H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Query: 633 PHK 635
++
Sbjct: 122 NNQ 124
Score = 122 bits (308), Expect = 8e-33
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 493 PFKCEI--CTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
C CTK F H+ H G H C C K F L H HTGE P
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 551 KCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQHTGETPY 606
+C + C K F+ +L HVR HTGD P+ C + C K F + +L +H+ H
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Query: 607 Q 607
Q
Sbjct: 124 Q 124
Score = 112 bits (284), Expect = 1e-29
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 631 ESPHKCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGES 688
C + C + F + H+ H G H C C K+F L H +HTGE
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 689 PHKCDF--CLKTFTRKEHLTNHLKQHAGETEHVCNI--CSKPFLKKEHLVNHSRSHTGER 744
P +C F C K F+ +L H++ H G+ +VC C+K F + +L +H +H +
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Query: 745 PF 746
Sbjct: 122 NN 123
Score = 111 bits (280), Expect = 4e-29
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 380 RPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETP 437
R C C K F + H H G + C CGK F + H HTGE P
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 438 HRCEI--CKKAFTRKEHYVNHVMWHTGETPHVCQV--CGKKYTRKEHLANHMRSHTNDTP 493
+C C K F+ + HV HTG+ P+VC C KK+ + +L +H+ +H
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Query: 494 FK 495
+
Sbjct: 123 NQ 124
Score = 110 bits (278), Expect = 9e-29
Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 35/151 (23%)
Query: 407 ETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGET 464
C + C K F M H+ H G
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-----------------------------GPR 33
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEI--CTKSFTRKEHFTNHIMWHTGETPH 522
HVC CGK + L H HT + PF+C C K F+ + H+ HTG+ P+
Sbjct: 34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 93
Query: 523 RCDF--CSKTFTRKEHLLNHVRQHTGESPHK 551
C F C+K F + +L +H+ H ++
Sbjct: 94 VCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 103 bits (259), Expect = 3e-26
Identities = 44/128 (34%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 687 ESPHKCDF--CLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGER 744
C C K F + HL H G HVC C K F++ L H HTGE+
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 745 PFACT--DCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDV--CPKDFTCKGHLVSHLR 800
PF CT CGK F L NL H R H +RP+ C C K F +L SH+
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTG------DRPYVCPFDGCNKKFAQSTNLKSHIL 115
Query: 801 SHLNERPH 808
+H + +
Sbjct: 116 THAKAKNN 123
Score = 91.4 bits (228), Expect = 5e-22
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 720 CNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERP 779
C+K F + H +H G R C +CGK+F L HQ H GE +P
Sbjct: 10 HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH---TGE---KP 62
Query: 780 FKCDV--CPKDFTCKGHLVSHLRSHLNERPHVCPH--CSKSFVEHTCMIKHIRKNHT 832
F+C C K F+ +L +H+R H +RP+VCP C+K F + T + HI H
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HA 118
Score = 91.4 bits (228), Expect = 5e-22
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 35/147 (23%)
Query: 298 HTCDL--CGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYT 355
C C K F M H H + C CGKAF
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAF-----------VESS----- 48
Query: 356 CAVCFHVFANEESLQRHTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQ 413
L+RH H+ ++P+ C+ C K F+ +L H R HTG+ PY C
Sbjct: 49 ------------KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 96
Query: 414 Y--CGKNFSRKEHMVNHVRKHTGETPH 438
+ C K F++ ++ +H+ H +
Sbjct: 97 FDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 72.9 bits (180), Expect = 1e-15
Identities = 27/94 (28%), Positives = 32/94 (34%), Gaps = 12/94 (12%)
Query: 743 ERPFACT--DCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLR 800
R AC C K F + H +H G R C C K F L H
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH----GP---RVHVCAECGKAFVESSKLKRHQL 55
Query: 801 SHLNERPHVCPH--CSKSFVEHTCMIKHIRKNHT 832
H E+P C C K F + H+R HT
Sbjct: 56 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-HT 88
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 129 bits (326), Expect = 1e-35
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGE 603
PHKC C K F+RK+ L H+R HTG P+KC C + L H+R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 604 TPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
P++CQ CP A L H+R HTG+S
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 127 bits (321), Expect = 6e-35
Identities = 36/93 (38%), Positives = 48/93 (51%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGE 659
P++C+ C K FSRKD L H+R HTG P+KC C + LN H+R+H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 660 SPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
P KC C + L H+R HTG+S
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 124 bits (314), Expect = 6e-34
Identities = 36/93 (38%), Positives = 47/93 (50%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGE 631
PHKC C K F+RK+ L H+R HTG PY+C+ C A + L H+R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 632 SPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
P KC C + L H+R HTG+S
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 122 bits (309), Expect = 2e-33
Identities = 32/93 (34%), Positives = 46/93 (49%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
PH+C+ C K F+RK+ L H+R HTG P+KC C + L H+R H+ +
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 576 SPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
P KC C + L H+R HTG++
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 112 bits (284), Expect = 5e-30
Identities = 33/93 (35%), Positives = 46/93 (49%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGE 463
P+KC+ CGK FSRK+ + H+R HTG P++C+ C A H+ H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 464 TPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
P CQ+C L H+RSHT D+
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 112 bits (282), Expect = 1e-29
Identities = 35/93 (37%), Positives = 46/93 (49%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGE 687
PHKC C + F+RKD L H+R HTG P+KC C + LN H+R+H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 688 SPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
P KC C LT HL+ H G++
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 111 bits (280), Expect = 2e-29
Identities = 32/93 (34%), Positives = 44/93 (47%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
PH C+VCGK ++RK+ L HMR HT P+KC+ C + H+ H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 520 TPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
P +C C L H+R HTG+S
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 111 bits (280), Expect = 2e-29
Identities = 34/93 (36%), Positives = 42/93 (45%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
PHKC C K F+RK+ L H+R HTG P+KC C L HL+ H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 716 TEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
C IC L H RSHTG+ +
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 110 bits (278), Expect = 3e-29
Identities = 34/94 (36%), Positives = 45/94 (47%)
Query: 487 SHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTG 546
S + P KCE+C K F+RK+ H+ HTG P++C C L H+R H+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 547 ESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
E P KC C + L H+R HTGDS
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 108 bits (272), Expect = 3e-28
Identities = 33/93 (35%), Positives = 47/93 (50%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
P+ C VC K F+RK+ L+ H RCHTG PYKC+ C + + H+R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 436 TPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
P +C+IC A H+ HTG++
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 102 bits (256), Expect = 4e-26
Identities = 31/93 (33%), Positives = 47/93 (50%)
Query: 432 HTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTND 491
PH+CE+C K F+RK+ H+ HTG P+ C+ C L H+R H+++
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 492 TPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
PFKC+IC + T H+ HTG++
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 96.3 bits (241), Expect = 4e-24
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQ 771
H C +C K F +K+ L H R HTG +P+ C C + +L H R H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD- 61
Query: 772 NGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
ERPFKC +CP L HLRSH +
Sbjct: 62 -----ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 95.6 bits (239), Expect = 8e-24
Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 28/121 (23%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSID 379
P C VCGK F + +L +H +CH G
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG----------------------------V 34
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHR 439
+PY C C A L H R H+ E P+KCQ C + H+R HTG++
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS 94
Query: 440 C 440
Sbjct: 95 S 95
Score = 85.2 bits (212), Expect = 4e-20
Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 739 SHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSH 798
S P C CGK F K L H R H G +P+KC C L H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH---TGV---KPYKCKTCDYAAADSSSLNKH 55
Query: 799 LRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
LR H +ERP C C + + + H+R HT
Sbjct: 56 LRIHSDERPFKCQICPYASRNSSQLTVHLRS-HT 88
Score = 77.8 bits (193), Expect = 1e-17
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 34/123 (27%)
Query: 296 GNHT------CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHL 349
G+ C++CGK F + ++ H R HT KP+ C C A
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYA--------------- 45
Query: 350 GGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETP 409
A+ SL +H + HS +RP+ C +C L H R HTG++
Sbjct: 46 -------------AADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG 92
Query: 410 YKC 412
Sbjct: 93 PSS 95
Score = 51.7 bits (125), Expect = 2e-08
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCA 357
C C + H R H++ +PF C +C A ++L H + H G S +
Sbjct: 39 CKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSSG 96
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 113 bits (286), Expect = 3e-30
Identities = 38/91 (41%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGE 603
+G S C C K F HL H H+G+ P+ C C F RK+ + HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 604 T--PYQCQYCPKAFSRKDHLVNHVRQ-HTGE 631
PY CQ C K FSR DHL H++Q H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 112 bits (284), Expect = 6e-30
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGE 659
+G + C+ C K F HL H H+GE P+ C C F RKD ++ HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 660 S--PHKCHFCSKSFTRKEHLNNHI-RLHTGE 687
P+ C C K F+R +HLN HI ++H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 111 bits (280), Expect = 2e-29
Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGE 631
+G S C C K F HL H H+GE PY C C F RKD + HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 632 S--PHKCSYCKQSFTRKDHLNNHV-RLHTGE 659
P+ C C + F+R DHLN H+ ++H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 107 bits (269), Expect = 5e-28
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
+G + C+ C K F HL H H+GE P+ C C F RK+ + HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 576 S--PHKCNYCAKSFTRKEHLVNHVRQ-HTGE 603
P+ C C K F+R +HL H++Q H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 107 bits (269), Expect = 6e-28
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGE 687
+G S C C + F HLN H H+GE P+ C C F RK+ ++ H+R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 688 S--PHKCDFCLKTFTRKEHLTNHLKQ-HAGE 715
P+ C C K F+R +HL H+KQ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 98.7 bits (247), Expect = 6e-25
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGE 463
+G + C+ CGK F H+ H H+GE P+ C +C F RK+ HV H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 464 T--PHVCQVCGKKYTRKEHLANHM-RSHT 489
P++CQ CGK ++R +HL H+ + H+
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 98.7 bits (247), Expect = 6e-25
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGE 547
+ + CEIC K F H H + H+GE P+ C C F RK+ + HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 548 S--PHKCNYCAKSFTRKEHLVNHVRQ-HTG 574
P+ C C K F+R +HL H++Q H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 97.9 bits (245), Expect = 9e-25
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
+G + C++CGK + HL H SH+ + P+ C +C F RK+ + H+ H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 520 T--PHRCDFCSKTFTRKEHLLNHVRQ-HTGE 547
P+ C C K F+R +HL H++Q H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 97.2 bits (243), Expect = 2e-24
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
+G S C C K F HLN H H+GE P+ C C F RK+ ++ H++ H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 716 TE--HVCNICSKPFLKKEHLVNHS-RSHTGER 744
++C C K F + +HL H + H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 95.3 bits (238), Expect = 1e-23
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
S C +C K F HL H H+GE PY C CG F RK+ M HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 436 T--PHRCEICKKAFTRKEHYVNHV-MWHTGE 463
P+ C+ C K F+R +H H+ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 88.3 bits (220), Expect = 3e-21
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQ 771
+G + C IC K F HL H SH+GE+P++C CG F K + +H RSH
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH--- 58
Query: 772 NGEVLERPFKCDVCPKDFTCKGHLVSHLR 800
+G V +P+ C C K F+ HL H++
Sbjct: 59 DGSV-GKPYICQSCGKGFSRPDHLNGHIK 86
Score = 86.0 bits (214), Expect = 2e-20
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 740 HTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHL 799
+G AC CGK F +L H+ SH +GE +P+ C VC F K + H+
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSH---SGE---KPYSCPVCGLRFKRKDRMSYHV 55
Query: 800 RSHLNE--RPHVCPHCSKSFVEHTCMIKHIRKNHT 832
RSH +P++C C K F + HI++ H+
Sbjct: 56 RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 82.9 bits (206), Expect = 2e-19
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 31/119 (26%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSID 379
+ C +CGK F + L RH HS +
Sbjct: 2 SSGSSGVACEICGKIF----------------------------RDVYHLNRHKLSHSGE 33
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGET--PYKCQYCGKNFSRKEHMVNHVRK-HTGE 435
+PY C VC F RK+ + H R H G PY CQ CGK FSR +H+ H+++ H+G
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 66.0 bits (162), Expect = 2e-13
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCA 357
C++CGK F Y + H+ H+ KP++C VCG F + + H + H G
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG------- 60
Query: 358 VCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHT-RCHTGE 407
S+ +PY C C K F+R +HL H + H+G
Sbjct: 61 -------------------SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 111 bits (281), Expect = 1e-29
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 603 ETPYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGES 660
E PY C C + FS+ L H+R HTG+ P +C C ++F+R DHL H+R HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTGE 687
P C C + F R + H ++H +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 107 bits (269), Expect = 5e-28
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 577 PHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
P+ C C + F++ L H+R HTG+ P+QC+ C + FSR DHL H+R HTGE P
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 635 KCSYCKQSFTRKDHLNNHVRLHTGE 659
C C + F R D H ++H +
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLRQ 88
Score = 105 bits (265), Expect = 2e-27
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 547 ESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGET 604
E P+ C C + F++ L H+R HTG P +C C ++F+R +HL H+R HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTGE 631
P+ C C + F+R D H + H +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 104 bits (261), Expect = 7e-27
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 631 ESPHKCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGES 688
E P+ C C + F++ L H+R+HTG+ P +C C ++F+R +HL HIR HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 689 PHKCDFCLKTFTRKEHLTNHLKQHAGETE 717
P CD C + F R + H K H + +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQKD 90
Score = 102 bits (257), Expect = 2e-26
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 519 ETPHRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDS 576
E P+ C C + F++ L H+R HTG+ P +C C ++F+R +HL H+R HTG+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTGE 603
P C+ C + F R + H + H +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 98.7 bits (247), Expect = 5e-25
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 493 PFKCEI--CTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
P+ C + C + F++ T HI HTG+ P +C C + F+R +HL H+R HTGE P
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 551 KCNYCAKSFTRKEHLVNHVRQHTG 574
C+ C + F R + H + H
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLR 87
Score = 98.7 bits (247), Expect = 5e-25
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 378 IDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
++RPY C V C + F++ L H R HTG+ P++C+ C +NFSR +H+ H+R HTGE
Sbjct: 1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 436 TPHRCEICKKAFTRKEHYVNHVMWHTGE 463
P C+IC + F R + H H +
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 97.5 bits (244), Expect = 1e-24
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 407 ETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGET 464
E PY C C + FS+ + H+R HTG+ P +C IC + F+R +H H+ HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHT 489
P C +CG+K+ R + H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHL 86
Score = 97.5 bits (244), Expect = 1e-24
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 463 ETPHVCQV--CGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGET 520
E P+ C V C +++++ L H+R HT PF+C IC ++F+R +H T HI HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGE 547
P CD C + F R + H + H +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 93.3 bits (233), Expect = 4e-23
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 659 ESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGET 716
E P+ C C + F++ L HIR+HTG+ P +C C++ F+R +HLT H++ H GE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 717 EHVCNICSKPFLKKEHLVNHSRSHTGER 744
C+IC + F + + H++ H ++
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 82.5 bits (205), Expect = 2e-19
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 723 CSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
C + F + L H R HTG++PF C C ++F +L H R+H GE +PF C
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---TGE---KPFAC 65
Query: 783 DVCPKDFTCKGHLVSHLRSHLNER 806
D+C + F H + HL ++
Sbjct: 66 DICGRKFARSDERKRHTKIHLRQK 89
Score = 82.5 bits (205), Expect = 2e-19
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 354 YTCAV--CFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYK 411
Y C V C F+ SL RH + H+ +P+ C +CM+ F+R +HL H R HTGE P+
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 412 CQYCGKNFSRKEHMVNHVRKHTGE 435
C CG+ F+R + H + H +
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQ 88
Score = 77.1 bits (191), Expect = 2e-17
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 743 ERPFAC--TDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLR 800
ERP+AC C + F G+L H R H G+ +PF+C +C ++F+ HL +H+R
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIH---TGQ---KPFQCRICMRNFSRSDHLTTHIR 55
Query: 801 SHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
+H E+P C C + F +H + H
Sbjct: 56 THTGEKPFACDICGRKFARSDERKRHTK-IHL 86
Score = 60.9 bits (149), Expect = 1e-11
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 30/112 (26%)
Query: 298 HTCDL--CGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYT 355
+ C + C + F + H R HT +KPF C +C + F H
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFS----RSDH----------- 49
Query: 356 CAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGE 407
L H + H+ ++P+ C +C + FAR + + HT+ H +
Sbjct: 50 -------------LTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 52.9 bits (128), Expect = 6e-09
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 776 LERPFKCDV--CPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
+ERP+ C V C + F+ G L H+R H ++P C C ++F + HIR HT
Sbjct: 1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HT 58
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 107 bits (269), Expect = 7e-28
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 558 SFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC--QYCPKAF 615
S + R H D P C K +T+ HL H+R HTGE PY+C + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 616 SRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHT 657
+R D L H R+HTG P +C C +SF+R DHL H++ H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 106 bits (268), Expect = 8e-28
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 530 TFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSF 587
+ L R H + P C K +T+ HL H+R HTG+ P+KC + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 588 TRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHT 629
R + L H R+HTG P+QC C ++FSR DHL H+++H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 105 bits (265), Expect = 2e-27
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 586 SFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSF 643
S + R H + P C K +++ HL H+R HTGE P+KC++ C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 644 TRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHT 685
R D L H R HTG P +C C++SF+R +HL H++ H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 102 bits (256), Expect = 3e-26
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 614 AFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHF--CSKSF 671
+ + R H + P C + +T+ HL H+R HTGE P+KC + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 672 TRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
R + L H R HTG P +C C ++F+R +HL H+K+H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 98.1 bits (245), Expect = 1e-24
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 390 TFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC--EICKKAF 447
+ R H + P C K +++ H+ H+R HTGE P++C E C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 448 TRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTN 490
R + H HTG P C VC + ++R +HLA HM+ H N
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 94.2 bits (235), Expect = 3e-23
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 474 KYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDF--CSKTF 531
R H D P CTK +T+ H H+ HTGE P++C + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 532 TRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHT 573
R + L H R+HTG P +C C +SF+R +HL H+++H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 92.3 bits (230), Expect = 1e-22
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 642 SFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDF--CLKTF 699
S R+H + P C+K +T+ HL H+R HTGE P+KC + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 700 TRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHT 741
R + LT H ++H G C +C++ F + +HL H + H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 91.1 bits (227), Expect = 3e-22
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 419 FSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC--QVCGKKYT 476
+ R H + P C K +T+ H H+ HTGE P+ C + C ++
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 477 RKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHT 517
R + L H R HT PF+C +C +SF+R +H H+ H
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 86.1 bits (214), Expect = 2e-20
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 698 TFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT--DCGKSF 755
+ + H + C+K + K HL H R+HTGE+P+ CT C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 756 PLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLN 804
L H R H +PF+C VC + F+ HL H++ H N
Sbjct: 58 ARSDELTRHYRKHTG------AKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 75.4 bits (186), Expect = 1e-16
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 334 AFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYCCSV--CMKTF 391
+ + + H C V+ L+ H + H+ ++PY C+ C F
Sbjct: 2 SSGSSGPDLEKRRIHYC----DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 392 ARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
AR + L H R HTG P++C C ++FSR +H+ H+++H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 50.7 bits (122), Expect = 4e-08
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 298 HTCDL--CGKFFPYRYQMIVHRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSM 353
H CD C K + + H R HT KP+ C C F EL H + H G
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75
Query: 354 YTCAVCFHVFANEESLQRHTKRH 376
+ C VC F+ + L H KRH
Sbjct: 76 FQCGVCNRSFSRSDHLALHMKRH 98
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 105 bits (264), Expect = 2e-27
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 543 QHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQH 600
+ T C K++T+ HL H+R HTG+ P+ C++ C F R + L H R+H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 601 TGETPYQCQYCPKAFSRKDHLVNHVRQH 628
TG P+QCQ C +AFSR DHL H+++H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 103 bits (259), Expect = 1e-26
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 571 QHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQH 628
+ T C K++T+ HL H+R HTGE PY C + C F+R D L H R+H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 629 TGESPHKCSYCKQSFTRKDHLNNHVRLH 656
TG P +C C ++F+R DHL H++ H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 103 bits (259), Expect = 1e-26
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 599 QHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLH 656
+ T C K +++ HL H+R HTGE P+ C + C F R D L H R H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 657 TGESPHKCHFCSKSFTRKEHLNNHIRLH 684
TG P +C C ++F+R +HL H++ H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 98.8 bits (247), Expect = 5e-25
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 627 QHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH--FCSKSFTRKEHLNNHIRLH 684
+ T + C +++T+ HL H+R HTGE P+ C C F R + L H R H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 685 TGESPHKCDFCLKTFTRKEHLTNHLKQH 712
TG P +C C + F+R +HL H+K+H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 93.7 bits (234), Expect = 3e-23
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD--FCSKTFTRKEHLLNHVRQHT 545
T C K++T+ H H+ HTGE P+ CD C F R + L H R+HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 546 GESPHKCNYCAKSFTRKEHLVNHVRQH 572
G P +C C ++F+R +HL H+++H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 90.7 bits (226), Expect = 3e-22
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 431 KHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQV--CGKKYTRKEHLANHMRSH 488
K T C K +T+ H H+ HTGE P+ C CG K+ R + L H R H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 489 TNDTPFKCEICTKSFTRKEHFTNHIMWH 516
T PF+C+ C ++F+R +H H+ H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 90.7 bits (226), Expect = 3e-22
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQY--CGKNFSRKEHMVNH 428
+ T H + C KT+ + HL+ H R HTGE PY C + CG F+R + + H
Sbjct: 1 KRTATH----TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 56
Query: 429 VRKHTGETPHRCEICKKAFTRKEHYVNHVMWH 460
RKHTG P +C+ C +AF+R +H H+ H
Sbjct: 57 YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 87.2 bits (217), Expect = 6e-21
Identities = 34/115 (29%), Positives = 44/115 (38%), Gaps = 30/115 (26%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD--FCLKTFTRKEHLTNHLKQHA 713
T C K++T+ HL H+R HTGE P+ CD C F R + LT H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY---- 57
Query: 714 GETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
R HTG RPF C C ++F +L H + H
Sbjct: 58 ------------------------RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 83.7 bits (208), Expect = 9e-20
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 711 QHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT--DCGKSFPLKGNLLFHQRSH 768
+ C K + K HL H R+HTGE+P+ C CG F L H R H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 769 RKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHL 803
RPF+C C + F+ HL H++ H
Sbjct: 61 TG------HRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 74.1 bits (183), Expect = 2e-16
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 740 HTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDV--CPKDFTCKGHLVS 797
T CGK++ +L H R+H GE +P+ CD C F L
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTH---TGE---KPYHCDWDGCGWKFARSDELTR 55
Query: 798 HLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
H R H RP C C ++F + H++
Sbjct: 56 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86
Score = 72.9 bits (180), Expect = 5e-16
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 30/115 (26%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSID 379
T CGK + ++ SH L+ H + H+ +
Sbjct: 2 RTATHTCDYAGCGKTY-TKS---SH------------------------LKAHLRTHTGE 33
Query: 380 RPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKH 432
+PY C C FAR + L H R HTG P++CQ C + FSR +H+ H+++H
Sbjct: 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 56.4 bits (137), Expect = 3e-10
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 30/109 (27%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSMYT 355
CGK + + H R HT KP+ C CG F E
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE--------------- 52
Query: 356 CAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCH 404
L RH ++H+ RP+ C C + F+R +HL H + H
Sbjct: 53 -------------LTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 40.2 bits (95), Expect = 2e-04
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 303 CGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHL 349
CG F ++ H R HT +PF C C +AF L H K H
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 102 bits (258), Expect = 1e-26
Identities = 35/80 (43%), Positives = 44/80 (55%)
Query: 579 KCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSY 638
C C KSF R L H+ H+ PY CQYC K F +K + H HTGE PHKC
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 639 CKQSFTRKDHLNNHVRLHTG 658
C ++F++ +L H R HTG
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 102 bits (256), Expect = 2e-26
Identities = 35/80 (43%), Positives = 46/80 (57%)
Query: 551 KCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQY 610
C C KSF R L H+ H+ P+ C YC K F +K + H HTGE P++CQ
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 611 CPKAFSRKDHLVNHVRQHTG 630
C KAFS+ +L+ H R+HTG
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 100 bits (253), Expect = 6e-26
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 606 YQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
+ C+ C K+F R L H+ H+ P+ C YC + F +K + H +HTGE PHKC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 666 FCSKSFTRKEHLNNHIRLHTG 686
C K+F++ +L H R HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 97.1 bits (243), Expect = 1e-24
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 524 CDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYC 583
C C K+F R L H+ H+ P+ C YC K F +K + H HTG+ PHKC C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 584 AKSFTRKEHLVNHVRQHTG 602
K+F++ +L+ H R+HTG
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 96.0 bits (240), Expect = 4e-24
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 382 YCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ C +C K+F R L H H+ PY CQYCGK F +K M H HTGE PH+C+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 442 ICKKAFTRKEHYVNHVMWHTG 462
+C KAF++ + + H HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 94.8 bits (237), Expect = 8e-24
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 494 FKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
F C+IC KSF R + H++ H+ P+ C +C K F +K + H HTGE PHKC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 554 YCAKSFTRKEHLVNHVRQHTG 574
C K+F++ +L+ H R+HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 92.9 bits (232), Expect = 4e-23
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 410 YKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQ 469
+ C+ CGK+F R + H+ H+ P+ C+ C K F +K H HTGE PH CQ
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 470 VCGKKYTRKEHLANHMRSHT 489
VCGK +++ +L H R HT
Sbjct: 62 VCGKAFSQSSNLITHSRKHT 81
Score = 91.7 bits (229), Expect = 1e-22
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 635 KCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDF 694
C C +SF R L+ H+ +H+ P+ C +C K F +K + H +HTGE PHKC
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 695 CLKTFTRKEHLTNHLKQHAG 714
C K F++ +L H ++H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 85.6 bits (213), Expect = 2e-20
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 468 CQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFC 527
C++CGK + R L+ H+ H++ P+ C+ C K F +K H HTGE PH+C C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 528 SKTFTRKEHLLNHVRQHTG 546
K F++ +L+ H R+HTG
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 85.6 bits (213), Expect = 2e-20
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 663 KCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNI 722
C C KSF R L+ H+ +H+ P+ C +C K F +K + H H GE H C +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 723 CSKPFLKKEHLVNHSRSHTG 742
C K F + +L+ HSR HTG
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 80.9 bits (201), Expect = 6e-19
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 354 YTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQ 413
+ C +C F +L H HS RPY C C K F +K ++ HT HTGE P+KCQ
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 414 YCGKNFSRKEHMVNHVRKHTG 434
CGK FS+ +++ H RKHTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 80.5 bits (200), Expect = 9e-19
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 440 CEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEIC 499
C+IC K+F R H++ H+ P+ CQ CGK++ +K + H HT + P KC++C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 500 TKSFTRKEHFTNHIMWHTG 518
K+F++ + H HTG
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 70.5 bits (174), Expect = 3e-15
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 746 FACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNE 805
F C CGKSF L H H + RP+ C C K F K + H H E
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIH---SDT---RPYPCQYCGKRFHQKSDMKKHTFIHTGE 55
Query: 806 RPHVCPHCSKSFVEHTCMIKHIRKNHT 832
+PH C C K+F + + +I H RK HT
Sbjct: 56 KPHKCQVCGKAFSQSSNLITHSRK-HT 81
Score = 64.4 bits (158), Expect = 4e-13
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 28/107 (26%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVC 359
C +CGK F + H H++ +P+ C CGK F ++++ H H G
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG--------- 54
Query: 360 FHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTG 406
++P+ C VC K F++ +L H+R HTG
Sbjct: 55 -------------------EKPHKCQVCGKAFSQSSNLITHSRKHTG 82
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 102 bits (257), Expect = 2e-26
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDS----PHKCNYCAKSFTRKE 591
+ R HTGE P+ C++C K+F +K+ L H +++ + C+ C K+FTR+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 592 HLVNHVRQHTGETPYQCQYCPKAF 615
+ H G + + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 100 bits (252), Expect = 9e-26
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 592 HLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGES----PHKCSYCKQSFTRKD 647
+ R HTGE PY C +C K F +K L H +++ + CS C ++FTR++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 648 HLNNHVRLHTGESPHKCHFCSKSF 671
+ H G + S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 93.7 bits (234), Expect = 2e-23
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 676 HLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETE----HVCNICSKPFLKKE 731
+ R HTGE P+ C C KTF +K+ L H K++ VC+ C K F ++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 732 HLVNHSRSHTGERPFACTDCGKSF 755
+ H+ + G + G S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 92.2 bits (230), Expect = 8e-23
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 732 HLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGE-VLERPFKCDVCPKDFT 790
+ R+HTGE+P+AC+ C K+F K L H + + + + F C C K FT
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY---HDPNFVPAAFVCSKCGKTFT 58
Query: 791 CKGHLVSHLRSHLNERPHVCPHCSKSF 817
+ + H + + S
Sbjct: 59 RRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 90.7 bits (226), Expect = 3e-22
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 480 HLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGET----PHRCDFCSKTFTRKE 535
+ R+HT + P+ C C K+F +K+ H + C C KTFTR+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 536 HLLNHVRQHTGESPHKCNYCAKSF 559
+ H G + S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 90.3 bits (225), Expect = 5e-22
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGET----PYKCQYCGKNFSRKE 423
S + H+ ++PY CS C KTF +K+ L+ H + + + C CGK F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 424 HMVNHVRKHTGETPHRCEICKKAF 447
M H G E +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 89.9 bits (224), Expect = 5e-22
Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 24/108 (22%)
Query: 396 HLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVN 455
+ R HTGE PY C +C K F +K+ + H +++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP-------------------- 41
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSF 503
+ VC CGK +TR+ +A H + + E S
Sbjct: 42 ----NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 80.3 bits (199), Expect = 1e-18
Identities = 23/106 (21%), Positives = 34/106 (32%), Gaps = 24/106 (22%)
Query: 314 IVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHT 373
R HT KP+ C C K F + L H K R+
Sbjct: 4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK------------------------RYH 39
Query: 374 KRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNF 419
+ + + CS C KTF R+ + H G + + G +
Sbjct: 40 DPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 48.3 bits (116), Expect = 2e-07
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHT----ERKPFTCHVCGKAFDFQAELMSHGKCHLGGSM 353
+ C C K F + + +H + + F C CGK F + + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 354 YTCAVC 359
Sbjct: 76 VEGENS 81
Score = 46.4 bits (111), Expect = 1e-06
Identities = 9/38 (23%), Positives = 10/38 (26%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAF 335
C CGK F R M H G +
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 38.7 bits (91), Expect = 6e-04
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 793 GHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
G S R+H E+P+ C HC K+F + + H + +
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYH 39
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 100 bits (252), Expect = 8e-26
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
P +C C ++F+R +HL H+R HTGE P+ C C + F+R D H P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61
Query: 637 SYCKQSFTRKDHLNNHV---RLHTGE 659
++ ++ HL N V + GE
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGE 87
Score = 96.0 bits (240), Expect = 3e-24
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHR 439
+P+ C +CM+ F+R +HL H R HTGE P+ C CG+ F+R + H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 440 CEICKKAFTRKEHYVNHVMW---HTGE 463
+ ++ ++ H N V GE
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGE 87
Score = 95.3 bits (238), Expect = 7e-24
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
P +C C + F+R +HL H+R HTGE P C+ C + F R + H P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL-PILE 61
Query: 581 NYCAKSFTRKEHLVNHV---RQHTGE 603
+ + ++ HL N V ++ GE
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGE 87
Score = 94.5 bits (236), Expect = 1e-23
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 493 PFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
PF+C IC ++F+R +H T HI HTGE P CD C + F R + H P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61
Query: 553 NYCAKSFTRKEHLVNHV---RQHTG 574
+ + ++ HL N V ++ G
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVG 86
Score = 94.1 bits (235), Expect = 2e-23
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
P +C C ++F+R DHL H+R HTGE P C C + F R + H + P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61
Query: 693 DFCLKTFTRKEHLTNHLKQ---HAGE 715
D + ++ HL N + + GE
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGE 87
Score = 89.1 bits (222), Expect = 1e-21
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 437 PHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
P +C IC + F+R +H H+ HTGE P C +CG+K+ R + H P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61
Query: 497 EICTKSFTRKEHFTNHIMW---HTGE 519
+ + ++ H N + GE
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGE 87
Score = 84.5 bits (210), Expect = 5e-20
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 720 CNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERP 779
C IC + F + +HL H R+HTGE+PFAC CG+ F H+ P
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-------ILP 58
Query: 780 FKCDVCPKDFTCKGHL---VSHLRSHLNER 806
D + + HL V+ L+ + ER
Sbjct: 59 ILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 74.5 bits (184), Expect = 1e-16
Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 32/115 (27%)
Query: 324 KPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYC 383
KPF C +C + F L +H + H G ++P+
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG----------------------------EKPFA 33
Query: 384 CSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHV---RKHTGE 435
C +C + FAR + + H P + S+ H+ N V +K GE
Sbjct: 34 CDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGE 87
Score = 72.5 bits (179), Expect = 7e-16
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 744 RPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHL 803
+PF C C ++F +L H R+H G E+PF CD+C + F H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH---TG---EKPFACDICGRKFARSDERKRHRDIQ- 54
Query: 804 NERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
+ P + + ++ + + +
Sbjct: 55 HILPILEDKVEELLSKNYHLENEVARLKK 83
Score = 59.4 bits (145), Expect = 3e-11
Identities = 23/114 (20%), Positives = 33/114 (28%), Gaps = 34/114 (29%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCA 357
C +C + F + H R HT KPF C +CG+ F E H
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH------------- 50
Query: 358 VCFHVFANEESLQR-HTKRHSIDRPYCCSVCMKTFARKEHLENHT---RCHTGE 407
+ P + ++ HLEN + GE
Sbjct: 51 ------------RDIQHI-----LPILEDKVEELLSKNYHLENEVARLKKLVGE 87
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 95.2 bits (238), Expect = 6e-24
Identities = 29/72 (40%), Positives = 36/72 (50%)
Query: 564 HLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVN 623
Q +KC+ C KSF+ L H R HTGE PY+C C KAF ++ HL+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 624 HVRQHTGESPHK 635
H R HTG P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 94.0 bits (235), Expect = 2e-23
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
Q +KC+ C KSF+ L H R HTG+ P+KC+ C K+F ++ HL+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 596 HVRQHTGETPY 606
H R HTG P
Sbjct: 65 HHRVHTGSGPS 75
Score = 92.1 bits (230), Expect = 6e-23
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 592 HLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNN 651
Q Y+C C K+FS L H R HTGE P+KC C ++F ++ HL
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 652 HVRLHTGESPHK 663
H R+HTG P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 90.2 bits (225), Expect = 3e-22
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 620 HLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNN 679
Q +KC C +SF+ L+ H R HTGE P+KC C K+F ++ HL
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 680 HIRLHTGESPHK 691
H R+HTG P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 85.2 bits (212), Expect = 2e-20
Identities = 26/75 (34%), Positives = 34/75 (45%)
Query: 392 ARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKE 451
YKC CGK+FS + H R HTGE P++C+ C KAF ++
Sbjct: 1 GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60
Query: 452 HYVNHVMWHTGETPH 466
H + H HTG P
Sbjct: 61 HLIGHHRVHTGSGPS 75
Score = 82.1 bits (204), Expect = 2e-19
Identities = 25/68 (36%), Positives = 32/68 (47%)
Query: 648 HLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTN 707
+KC C KSF+ L+ H R HTGE P+KCD C K F ++ HL
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 708 HLKQHAGE 715
H + H G
Sbjct: 65 HHRVHTGS 72
Score = 81.7 bits (203), Expect = 3e-19
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVN 427
S R + R Y C C K+F+ L H R HTGE PYKC CGK F ++ H++
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 428 HVRKHTGETPH 438
H R HTG P
Sbjct: 65 HHRVHTGSGPS 75
Score = 81.7 bits (203), Expect = 3e-19
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 508 HFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVN 567
++CD C K+F+ L H R HTGE P+KC+ C K+F ++ HL+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 568 HVRQHTGDSPHK 579
H R HTG P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 79.4 bits (197), Expect = 2e-18
Identities = 25/72 (34%), Positives = 34/72 (47%)
Query: 480 HLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLN 539
+KC+ C KSF+ + H HTGE P++CD C K F ++ HL+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 540 HVRQHTGESPHK 551
H R HTG P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 76.3 bits (189), Expect = 2e-17
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 676 HLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVN 735
+KCD C K+F+ L+ H + H GE + C+ C K F+++ HL+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 736 HSRSHTGERPF 746
H R HTG P
Sbjct: 65 HHRVHTGSGPS 75
Score = 75.9 bits (188), Expect = 3e-17
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 732 HLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTC 791
R + C +CGKSF +L H+R+H GE +P+KCD C K F
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH---TGE---KPYKCDECGKAFIQ 58
Query: 792 KGHLVSHLRSHLNERPH 808
+ HL+ H R H P
Sbjct: 59 RSHLIGHHRVHTGSGPS 75
Score = 72.5 bits (179), Expect = 6e-16
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 424 HMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLAN 483
+ ++C+ C K+F+ H HTGE P+ C CGK + ++ HL
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 484 HMRSHTNDTPFK 495
H R HT P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 70.9 bits (175), Expect = 2e-15
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 704 HLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLF 763
Q + C+ C K F L H R+HTGE+P+ C +CGK+F + +L+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 764 HQRSH 768
H R H
Sbjct: 65 HHRVH 69
Score = 69.0 bits (170), Expect = 1e-14
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
+ C CGK ++ L+ H R+HT + P+KC+ C K+F ++ H H HTG
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72
Query: 520 TPH 522
P
Sbjct: 73 GPS 75
Score = 63.2 bits (155), Expect = 1e-12
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 28/98 (28%)
Query: 314 IVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHT 373
ER+ + C CGK+F ++L H + H G
Sbjct: 7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG----------------------- 43
Query: 374 KRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYK 411
++PY C C K F ++ HL H R HTG P
Sbjct: 44 -----EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76
Score = 57.1 bits (139), Expect = 2e-10
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 758 KGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSF 817
G+ + R+ R +KCD C K F+ L H R+H E+P+ C C K+F
Sbjct: 3 SGSSGRSEWQQRE------RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF 56
Query: 818 VEHTCMIKHIRKNHT 832
++ + +I H R HT
Sbjct: 57 IQRSHLIGHHRV-HT 70
Score = 47.8 bits (115), Expect = 3e-07
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
CD CGK F + + HRR HT KP+ C CGKAF ++ L+ H + H G
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71
Score = 29.3 bits (67), Expect = 1.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPF 326
CD CGK F R +I H R HT P
Sbjct: 49 CDECGKAFIQRSHLIGHHRVHTGSGPS 75
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 93.7 bits (234), Expect = 2e-23
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
H +H + P+KC+ C SF K +L +H HTG+ P++CN C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 596 HVRQHTGETPY 606
H R H+GE PY
Sbjct: 64 HTRIHSGEKPY 74
Score = 91.4 bits (228), Expect = 1e-22
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 564 HLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVN 623
H +H D P+KC+ C SF K +L +H HTGE PY+C C F+R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 624 HVRQHTGESPH 634
H R H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 90.6 bits (226), Expect = 2e-22
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 592 HLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNN 651
H +H + PY+C C +F K +L +H HTGE P++C+ C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 652 HVRLHTGESPH 662
H R+H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 90.2 bits (225), Expect = 3e-22
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 620 HLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNN 679
H +H + P+KC C+ SF K +L +H +HTGE P++C+ C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 680 HIRLHTGESPH 690
H R+H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 87.1 bits (217), Expect = 3e-21
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 396 HLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVN 455
H +H+ + PYKC C +F K ++ +H HTGE P+RC IC F R +
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 456 HVMWHTGETPH 466
H H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 85.6 bits (213), Expect = 1e-20
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 648 HLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTN 707
H ++H + + P+KC C SF K +L +H +HTGE P++C+ C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 708 HLKQHAGE 715
H + H+GE
Sbjct: 64 HTRIHSGE 71
Score = 82.1 bits (204), Expect = 2e-19
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 508 HFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVN 567
H +H + P++CD C +F K +L +H HTGE P++CN C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 568 HVRQHTGDSPH 578
H R H+G+ P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 82.1 bits (204), Expect = 2e-19
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 480 HLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLN 539
H +H +D P+KC+ C SF K + +H HTGE P+RC+ C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 540 HVRQHTGESPH 550
H R H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 80.6 bits (200), Expect = 8e-19
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 676 HLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVN 735
H ++H + + P+KCD C +F K +L +H H GE + CNIC F + +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 736 HSRSHTGERPF 746
H+R H+GE+P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 79.4 bits (197), Expect = 2e-18
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVN 427
H+ D+PY C C +F K +L +H HTGE PY+C CG F+R ++
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 428 HVRKHTGETPH 438
H R H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 77.1 bits (191), Expect = 1e-17
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 732 HLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTC 791
H +HS ++P+ C C SF KGNL H+ H GE +P++C++C F
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH---TGE---KPYRCNICGAQFNR 57
Query: 792 KGHLVSHLRSHLNERPH 808
+L +H R H E+P+
Sbjct: 58 PANLKTHTRIHSGEKPY 74
Score = 74.0 bits (183), Expect = 2e-16
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 424 HMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLAN 483
H +H + P++C+ C+ +F K + +H HTGE P+ C +CG ++ R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 484 HMRSHTNDTPF 494
H R H+ + P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 72.1 bits (178), Expect = 8e-16
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 452 HYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTN 511
H+ +H + P+ C C + K +LA+H HT + P++C IC F R +
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 512 HIMWHTGETPH 522
H H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 59.4 bits (145), Expect = 2e-11
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 28/97 (28%)
Query: 314 IVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHT 373
H KP+ C C +F ++ L SH H G
Sbjct: 6 HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG----------------------- 42
Query: 374 KRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY 410
++PY C++C F R +L+ HTR H+GE PY
Sbjct: 43 -----EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 54.4 bits (132), Expect = 1e-09
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 757 LKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKS 816
+ + H ++P+KCD C F KG+L SH H E+P+ C C
Sbjct: 1 MGHHHHHHSHMTHS------DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ 54
Query: 817 FVEHTCMIKHIR 828
F + H R
Sbjct: 55 FNRPANLKTHTR 66
Score = 47.8 bits (115), Expect = 2e-07
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
CD C F Y+ + H+ HT KP+ C++CG F+ A L +H + H G
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70
Score = 28.2 bits (64), Expect = 2.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPF 326
C++CG F + H R H+ KP+
Sbjct: 48 CNICGAQFNRPANLKTHTRIHSGEKPY 74
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 91.8 bits (229), Expect = 8e-23
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 592 HLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGES--PHKCSYCKQSFTRKDHL 649
+ R H+GE PY+C C F++ + H+ Q E+ C +C RK L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 650 NNHVR-LHTGESPH 662
H+R H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 91.0 bits (227), Expect = 1e-22
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDS--PHKCNYCAKSFTRKEHL 593
+ R H+GE P++C C FT+ + H+ Q ++ C +C RK L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 594 VNHVR-QHTGETPY 606
H+R QH+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 87.2 bits (217), Expect = 4e-21
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 480 HLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGET--PHRCDFCSKTFTRKEHL 537
+ R+H+ + P++C IC FT+ HI+ E C C RK L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 538 LNHVR-QHTGESPH 550
H+R QH+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 87.2 bits (217), Expect = 4e-21
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 648 HLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGES--PHKCDFCLKTFTRKEHL 705
+ R H+GE P++C+ C FT+ + HI E+ C C RK L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 706 TNHL-KQHAGE 715
HL KQH+
Sbjct: 62 GVHLRKQHSYS 72
Score = 85.3 bits (212), Expect = 2e-20
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 396 HLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGET--PHRCEICKKAFTRKEHY 453
+ R H+GE PY+C C F++ M H+ + E C C RK
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 454 VNHV-MWHTGETPH 466
H+ H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 79.1 bits (196), Expect = 2e-18
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 732 HLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTC 791
+ R+H+GE+P+ C C F G + H + E F C C
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK---HTEN-VAKFHCPHCDTVIAR 57
Query: 792 KGHLVSHLRS-HLNERPH 808
K L HLR H P
Sbjct: 58 KSDLGVHLRKQHSYSGPS 75
Score = 78.7 bits (195), Expect = 3e-18
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGET--PYKCQYCGKNFSRKEHM 425
S + HS ++PY C +C F + ++ H E + C +C +RK +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 426 VNHVRK-HTGETPH 438
H+RK H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 72.9 bits (180), Expect = 4e-16
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT--NDTPFKCEICTKSFTRKEHFTNHI 513
H+GE P+ C +C ++T+ + H+ N F C C RK H+
Sbjct: 6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Query: 514 -MWHTGETPH 522
H+ P
Sbjct: 66 RKQHSYSGPS 75
Score = 67.9 bits (167), Expect = 2e-14
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 759 GNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNE--RPHVCPHCSKS 816
G+ R+H E+P++C +C FT G + H+ E CPHC
Sbjct: 1 GSSGSSGRTHSG------EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTV 54
Query: 817 FVEHTCMIKHIRKNHT 832
+ + H+RK H+
Sbjct: 55 IARKSDLGVHLRKQHS 70
Score = 57.5 bits (140), Expect = 1e-10
Identities = 18/96 (18%), Positives = 26/96 (27%), Gaps = 27/96 (28%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKR 375
R H+ KP+ C++C F + H +
Sbjct: 6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN----------------------- 42
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRC-HTGETPY 410
+ C C ARK L H R H+ P
Sbjct: 43 ---VAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 39.4 bits (93), Expect = 2e-04
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHT--ERKPFTCHVCGKAFDFQAELMSH 344
+ C +C F M +H F C C +++L H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64
Score = 28.3 bits (64), Expect = 2.0
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 298 HTCDLCGKFFPYRYQMIVH-RRYHTERKPFT 327
C C + + VH R+ H+ P +
Sbjct: 46 FHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 91.8 bits (229), Expect = 9e-23
Identities = 30/70 (42%), Positives = 38/70 (54%)
Query: 565 LVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNH 624
H+G+ P+ C C K+F+R LV H R HTGE PY+C C KAFS+ L+NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 625 VRQHTGESPH 634
R HT
Sbjct: 62 QRIHTSGPSS 71
Score = 90.6 bits (226), Expect = 2e-22
Identities = 31/70 (44%), Positives = 38/70 (54%)
Query: 593 LVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNH 652
H+GE PY C C KAFSR LV H R HTGE P+KC C ++F++ L NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 653 VRLHTGESPH 662
R+HT
Sbjct: 62 QRIHTSGPSS 71
Score = 90.6 bits (226), Expect = 2e-22
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 537 LLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNH 596
H+GE P+ C C K+F+R LV H R HTG+ P+KC C K+F++ L+NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 597 VRQHTGETPY 606
R HT
Sbjct: 62 QRIHTSGPSS 71
Score = 86.8 bits (216), Expect = 4e-21
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 621 LVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNH 680
H+GE P+ C C ++F+R L H R+HTGE P+KC C K+F++ L NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 681 IRLHTGESPH 690
R+HT
Sbjct: 62 QRIHTSGPSS 71
Score = 85.2 bits (212), Expect = 1e-20
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 397 LENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNH 456
+ H+GE PY C CGK FSR +V H R HTGE P++C C KAF++ +NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 457 VMWHTGETPH 466
HT
Sbjct: 62 QRIHTSGPSS 71
Score = 81.4 bits (202), Expect = 3e-19
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 649 LNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNH 708
+ +H+GE P+ C C K+F+R L H R+HTGE P+KC C K F++ L NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 709 LKQHAGE 715
+ H
Sbjct: 62 QRIHTSG 68
Score = 80.6 bits (200), Expect = 7e-19
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 369 LQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNH 428
+ HS ++PY C C K F+R L H R HTGE PYKC CGK FS+ ++NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 429 VRKHTGETPH 438
R HT
Sbjct: 62 QRIHTSGPSS 71
Score = 80.2 bits (199), Expect = 8e-19
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
H+GE P+ C C K F+R L+ H R HTGE P+KC C K+F++ L+NH R HT
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68
Query: 576 SPH 578
Sbjct: 69 PSS 71
Score = 77.5 bits (192), Expect = 8e-18
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 677 LNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNH 736
+ +H+GE P+ C C K F+R L H + H GE + C C K F + L+NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 737 SRSHTGERPFA 747
R HT
Sbjct: 62 QRIHTSGPSSG 72
Score = 76.4 bits (189), Expect = 2e-17
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 733 LVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCK 792
S H+GE+P+ C +CGK+F L+ HQR H GE +P+KC C K F+
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH---TGE---KPYKCLECGKAFSQN 55
Query: 793 GHLVSHLRSHLNERPH 808
L++H R H +
Sbjct: 56 SGLINHQRIHTSGPSS 71
Score = 76.4 bits (189), Expect = 2e-17
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 481 LANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNH 540
+ H+ + P+ C C K+F+R H HTGE P++C C K F++ L+NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 541 VRQHTGESPH 550
R HT
Sbjct: 62 QRIHTSGPSS 71
Score = 70.6 bits (174), Expect = 2e-15
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
H+GE P+ C CGK ++R L H R HT + P+KC C K+F++ NH HT
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68
Query: 520 TPH 522
Sbjct: 69 PSS 71
Score = 70.2 bits (173), Expect = 3e-15
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 705 LTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFH 764
+ H+GE + C C K F + LV H R HTGE+P+ C +CGK+F L+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 765 QRSH 768
QR H
Sbjct: 62 QRIH 65
Score = 69.8 bits (172), Expect = 4e-15
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 426 VNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHM 485
H+GE P+ C C KAF+R V H HTGE P+ C CGK +++ L NH
Sbjct: 3 SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62
Query: 486 RSHTNDTPF 494
R HT+
Sbjct: 63 RIHTSGPSS 71
Score = 60.9 bits (149), Expect = 6e-12
Identities = 25/97 (25%), Positives = 34/97 (35%), Gaps = 28/97 (28%)
Query: 314 IVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHT 373
H+ KP+ C CGKAF + L+ H + H G
Sbjct: 3 SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG----------------------- 39
Query: 374 KRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY 410
++PY C C K F++ L NH R HT
Sbjct: 40 -----EKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 54.0 bits (131), Expect = 2e-09
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 761 LLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEH 820
H +GE +P+ C C K F+ LV H R H E+P+ C C K+F ++
Sbjct: 2 SSGSSGIH---SGE---KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 55
Query: 821 TCMIKHIR 828
+ +I H R
Sbjct: 56 SGLINHQR 63
Score = 49.8 bits (120), Expect = 5e-08
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
C CGK F ++ H+R HT KP+ C CGKAF + L++H + H
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67
Score = 31.3 bits (72), Expect = 0.16
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPF 326
C CGK F +I H+R HT
Sbjct: 45 CLECGKAFSQNSGLINHQRIHTSGPSS 71
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 90.7 bits (226), Expect = 2e-22
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 544 HTGESPHKCNY--CAKSFTRKEHLVNHVR-QHTGDSPHKCNY--CAKSFTRKEHLVNHVR 598
+G S C++ C + F+ +++L +H + QH C C KSF K+HL H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 599 QHTGETPYQCQYCPKAF 615
H+ Y C++ +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 90.7 bits (226), Expect = 2e-22
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 628 HTGESPHKCSY--CKQSFTRKDHLNNHVRL-HTGESPHKCHF--CSKSFTRKEHLNNHIR 682
+G S C + C + F+ + +LN+H + H + C C KSF K+HL H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 683 LHTGESPHKCDFCLKTF 699
LH+ + C+F +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 88.4 bits (220), Expect = 2e-21
Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 29/103 (28%)
Query: 656 HTGESPHKCHF--CSKSFTRKEHLNNHIRL-HTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
+G S C F C + F+ +++LN+H + H + C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA---------------- 45
Query: 713 AGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSF 755
C K F K+HL H + H+ R + C G S
Sbjct: 46 ----------CGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 86.4 bits (215), Expect = 6e-21
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 572 HTGDSPHKCNY--CAKSFTRKEHLVNHVR-QHTGETPYQCQY--CPKAFSRKDHLVNHVR 626
+G S C++ C + F+ +++L +H + QH + + C C K+F+ K HL H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 627 QHTGESPHKCSYCKQSF 643
H+ + C + S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 82.2 bits (204), Expect = 2e-19
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 488 HTNDTPFKCEI--CTKSFTRKEHFTNHI-MWHTGETPHRCDF--CSKTFTRKEHLLNHVR 542
+ + C+ C + F+ +++ +H H + C C K+F K+HL H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 543 QHTGESPHKCNYCAKSF 559
H+ + C + S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 81.1 bits (201), Expect = 6e-19
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 376 HSIDRPYCCSV--CMKTFARKEHLENHTR-CHTGETPYKCQY--CGKNFSRKEHMVNHVR 430
S C C + F+ +++L +H + H + + C CGK+F+ K+H+ H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 431 KHTGETPHRCEICKKAF 447
H+ + CE +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 79.5 bits (197), Expect = 2e-18
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 29/103 (28%)
Query: 404 HTGETPYKCQY--CGKNFSRKEHMVNHVR-KHTGETPHRCEICKKAFTRKEHYVNHVMWH 460
+G + C + CG+ FS ++++ +H + +H + C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE------------------ 43
Query: 461 TGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSF 503
CGK + K+HL HM+ H++ + CE S
Sbjct: 44 --------PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 76.8 bits (190), Expect = 1e-17
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Query: 740 HTGERPFACT--DCGKSFPLKGNLLFHQR-SHRKQNGEVLERPFKCD--VCPKDFTCKGH 794
+G C CG+ F + L H++ H ++ F C C K F K H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH------QKSFSCPEPACGKSFNFKKH 55
Query: 795 LVSHLRSHLNERPHVCPHCSKSF 817
L H++ H + R ++C S
Sbjct: 56 LKEHMKLHSDTRDYICEFSGPSS 78
Score = 64.9 bits (159), Expect = 3e-13
Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 33/105 (31%)
Query: 320 HTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTK-RH 376
+ C CG+ F +N + L H K +H
Sbjct: 2 SSGSSGMPCDFPGCGRIF----------------------------SNRQYLNHHKKYQH 33
Query: 377 SIDRPYCCS--VCMKTFARKEHLENHTRCHTGETPYKCQYCGKNF 419
+ + C C K+F K+HL+ H + H+ Y C++ G +
Sbjct: 34 IHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 47.2 bits (113), Expect = 5e-07
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 777 ERPFKCDV--CPKDFTCKGHLVSHLR-SHLNERPHVCPH--CSKSFVEHTCMIKHIR 828
CD C + F+ + +L H + H++++ CP C KSF + +H++
Sbjct: 5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Score = 46.0 bits (110), Expect = 1e-06
Identities = 24/98 (24%), Positives = 35/98 (35%), Gaps = 33/98 (33%)
Query: 299 TCDL--CGKFFPYRYQMIVHRRY-HTERKPFTC--HVCGKAFDFQAELMSHGKCHLGGSM 353
CD CG+ F R + H++Y H +K F+C CGK+
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKS------------------- 49
Query: 354 YTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTF 391
F ++ L+ H K HS R Y C +
Sbjct: 50 ---------FNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 42.5 bits (101), Expect = 2e-05
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 298 HTCD--LCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAF 335
+C CGK F ++ + H + H++ + + C G +
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 28.7 bits (65), Expect = 1.5
Identities = 5/33 (15%), Positives = 8/33 (24%), Gaps = 2/33 (6%)
Query: 802 HLNERPHVCPH--CSKSFVEHTCMIKHIRKNHT 832
C C + F + H + H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI 34
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 89.5 bits (223), Expect = 5e-22
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHT 601
+ P KC+ C+ S + K L H R H D P KCNYC+ + +L H+++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 602 GETPYQC 608
G+
Sbjct: 62 GDMSGPS 68
Score = 86.4 bits (215), Expect = 5e-21
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHT 629
+ P KC+ C+ S + K L H R H + P++C YC + +L H+++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 630 GESPHKCS 637
G+ S
Sbjct: 62 GDMSGPSS 69
Score = 85.2 bits (212), Expect = 1e-20
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHT 685
+ P KCS C S + K L H R+H + P KC++CS + +L+ H++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 686 GE 687
G+
Sbjct: 62 GD 63
Score = 85.2 bits (212), Expect = 2e-20
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 598 RQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHT 657
+ P +C C + S K L H R H + P KC+YC + +L+ H++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 658 GE 659
G+
Sbjct: 62 GD 63
Score = 82.9 bits (206), Expect = 9e-20
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
+ P +C CS + + K L H R H + P KCNYC+ + +L H+++ GD
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Score = 82.5 bits (205), Expect = 1e-19
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 654 RLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHA 713
+ P KC CS S + K L H R+H + P KC++C + +L+ H+K+
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 714 GE 715
G+
Sbjct: 62 GD 63
Score = 79.5 bits (197), Expect = 2e-18
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
S P CS C + + K L H R H + P+KC YC + + ++ H++K G+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Score = 77.5 bits (192), Expect = 7e-18
Identities = 14/62 (22%), Positives = 23/62 (37%)
Query: 402 RCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHT 461
+ P KC C + S K + H R H + P +C C + + H+
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 462 GE 463
G+
Sbjct: 62 GD 63
Score = 73.7 bits (182), Expect = 2e-16
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
+ P C C + K L H R H D PFKC C+ + + + H+ G+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Score = 73.3 bits (181), Expect = 2e-16
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHT 545
S ++ P KC C+ S + K H H + P +C++CS + +L H+++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 546 GE 547
G+
Sbjct: 62 GD 63
Score = 72.1 bits (178), Expect = 7e-16
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 738 RSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVS 797
S + P C++C S K L H+R H +RPFKC+ C D +L
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCT------DRPFKCNYCSFDTKQPSNLSK 55
Query: 798 HLRSH 802
H++
Sbjct: 56 HMKKF 60
Score = 68.3 bits (168), Expect = 1e-14
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
+ P +C C + + K H H + P C C + +L+ HM+
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 67.5 bits (166), Expect = 3e-14
Identities = 15/68 (22%), Positives = 25/68 (36%)
Query: 682 RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHT 741
+ P KC C + + K L H + H + CN CS + +L H +
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 742 GERPFACT 749
G+ +
Sbjct: 62 GDMSGPSS 69
Score = 55.6 bits (135), Expect = 3e-10
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
P KC C + K L H R H +RP C +CS + + + KH++K
Sbjct: 7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FH 61
Score = 53.7 bits (130), Expect = 2e-09
Identities = 14/95 (14%), Positives = 28/95 (29%), Gaps = 28/95 (29%)
Query: 318 RYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHS 377
+ P C C + +++ +L+ H + H
Sbjct: 2 SSGSSGHPEKCSECSYS----------------------------CSSKAALRIHERIHC 33
Query: 378 IDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
DRP+ C+ C + +L H + G+
Sbjct: 34 TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 46.3 bits (111), Expect = 8e-07
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
C C + + +H R H +PF C+ C + L H K G
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 28.6 bits (65), Expect = 1.5
Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 800 RSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S + P C CS S + H R H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERI-HC 33
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 87.7 bits (218), Expect = 3e-21
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 578 HKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQHTGESP 633
+ C++ C K+F + L H HT + PY+C + C K FS L H + H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 634 HKCSYCKQSFTRKDHLNNHVR 654
K C HV
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 80.4 bits (199), Expect = 1e-18
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 606 YQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLHTGESP 661
Y C + C KAF + + L H HT + P++C + C + F+ L H ++H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 662 HKCHFCSKSFTRKEHLNNHIR 682
K CS H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 80.0 bits (198), Expect = 2e-18
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 522 HRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSP 577
+ C F C K F + L H HT + P++C + C K F+ L H + H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 578 HKCNYCAKSFTRKEHLVNHVR 598
K + C+ + HV
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 79.2 bits (196), Expect = 3e-18
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 382 YCCSV--CMKTFARKEHLENHTRCHTGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETP 437
Y C C K F + L+ H HT + PY+C + C K FS + H + H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 438 HRCEICKKAFTRKEHYVNHVM 458
+ + C Y+ HV
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 77.3 bits (191), Expect = 1e-17
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 634 HKCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESP 689
+ C + C ++F + + L H HT + P++C C K F+ L H ++H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 690 HKCDFCLKTFTRKEHLTNHLK 710
K D C H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 72.7 bits (179), Expect = 6e-16
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 496 CEICTKSFTRKEHFTNHIMWHTGETPHRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCN 553
E C K+F + H HT + P+ C C K F+ L H + H G K +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 554 YCAKSFTRKEHLVNHVR 570
C+ + HV
Sbjct: 66 SCSFVGKTWTLYLKHVA 82
Score = 70.7 bits (174), Expect = 3e-15
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 440 CEICKKAFTRKEHYVNHVMWHTGETPHVC--QVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
E C KAF + H HT + P+ C + C K+++ L H + H K +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 498 ICTKSFTRKEHFTNHIM 514
C+ + H+
Sbjct: 66 SCSFVGKTWTLYLKHVA 82
Score = 63.8 bits (156), Expect = 7e-13
Identities = 22/107 (20%), Positives = 29/107 (27%), Gaps = 28/107 (26%)
Query: 662 HKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHV 719
+ CHF C K+F + L H HT + P++C
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH------------------------- 36
Query: 720 CNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQR 766
C K F L H + H G C L H
Sbjct: 37 -EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 57.2 bits (139), Expect = 1e-10
Identities = 26/116 (22%), Positives = 35/116 (30%), Gaps = 34/116 (29%)
Query: 718 HVCNI--CSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEV 775
+VC+ C K F K L H SHT + P+ C G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG----------------------- 38
Query: 776 LERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNH 831
C K F+ L H + H CS T +KH+ + H
Sbjct: 39 ---------CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 56.9 bits (138), Expect = 2e-10
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 353 MYTCAV--CFHVFANEESLQRHTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGET 408
MY C C F L+ H H+ PY C C K F+ L+ H + H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 409 PYKCQYCGKNFSRKEHMVNHVRK 431
K C + HV +
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAE 83
Score = 51.1 bits (123), Expect = 2e-08
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 299 TCDLCGKFFPYRYQMIVHRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSMYTC 356
+ CGK F Q+ VH+ HT++ P+ C C K F + L H K H G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64
Query: 357 AVCFHVFANEESLQRHTKR 375
C V +H
Sbjct: 65 DSCSFVGKTWTLYLKHVAE 83
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 81.4 bits (202), Expect = 2e-19
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRK-HTGET 436
R + C VC + FAR+EHL+ H R HT E PY C C + F+R++ ++ H +K H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 81.0 bits (201), Expect = 3e-19
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHV-RQHTGE 631
C C ++F R+EHL H R HT E PY C C +AF+R+D L+ H + H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 76.4 bits (189), Expect = 1e-17
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHV-RLHTGE 659
+ C+ C +AF+R++HL H R HT E P+ C C ++FTR+D L H ++H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 76.4 bits (189), Expect = 2e-17
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHV-RQHTGET 604
C C ++F R+EHL H R HT + P+ C C ++FTR++ L+ H + H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 75.2 bits (186), Expect = 4e-17
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHI-RLHTGE 687
C C ++F R++HL H R HT E P+ C C+++FTR++ L H ++H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 74.1 bits (183), Expect = 1e-16
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQ-HAGET 716
C C+++F R+EHL H R HT E P+ C C + FTR++ L H ++ H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 73.7 bits (182), Expect = 1e-16
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHV-RQHTGD 575
C+ C++ F R+EHL H R HT E P+ C C ++FTR++ L+ H + H+G+
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 71.7 bits (177), Expect = 6e-16
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 493 PFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHV-RQHTGE 547
F CE+CT++F R+EH H HT E P+ C C++ FTR++ L+ H + H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 71.0 bits (175), Expect = 1e-15
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVM-WHTGET 464
+ C+ C + F+R+EH+ H R HT E P+ C +C +AFTR++ + H H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 69.8 bits (172), Expect = 3e-15
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIM-WHTGET 520
VC+VC + + R+EHL H RSHTN+ P+ C +C ++FTR++ H H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 65.2 bits (160), Expect = 1e-13
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 718 HVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFH-QRSH 768
VC +C++ F ++EHL H RSHT E+P+ C C ++F + L+ H Q+ H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 62.5 bits (153), Expect = 1e-12
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 437 PHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHM-RSHT 489
CE+C +AF R+EH H HT E P+ C +C + +TR++ L H + H+
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 60.6 bits (148), Expect = 6e-12
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 778 RPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
R F C+VC + F + HL H RSH NE+P+ C C+++F +I+H +K H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 59.4 bits (145), Expect = 1e-11
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 689 PHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHS-RSHTGE 743
C+ C + F R+EHL H + H E + C +C++ F +++ L+ H+ + H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 55.2 bits (134), Expect = 4e-10
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 744 RPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLR 800
R F C C ++F + +L H RSH E+P+ C +C + FT + L+ H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN------EKPYPCGLCNRAFTRRDLLIRHAQ 51
Score = 49.4 bits (119), Expect = 4e-08
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 29/86 (33%)
Query: 324 KPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYC 383
+ F C VC +A FA +E L+RH + H+ ++PY
Sbjct: 1 RSFVCEVCTRA----------------------------FARQEHLKRHYRSHTNEKPYP 32
Query: 384 CSVCMKTFARKEHLENHT-RCHTGET 408
C +C + F R++ L H + H+G
Sbjct: 33 CGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 46.7 bits (112), Expect = 4e-07
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGK 346
C++C + F + + H R HT KP+ C +C +AF + L+ H +
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 79.9 bits (198), Expect = 8e-19
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVR--QHTGETPYQCQYCPKAFSRKDHLVNHVRQ 627
G+ ++C C++ +T + H Y C +C K F+RKD++ HV+
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 628 HTG 630
Sbjct: 63 IHK 65
Score = 78.0 bits (193), Expect = 5e-18
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVR--QHTGDSPHKCNYCAKSFTRKEHLVNHVRQ 599
GE ++C C++ +T + H + C +C K FTRK+++ HV+
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 600 HTG 602
Sbjct: 63 IHK 65
Score = 77.2 bits (191), Expect = 9e-18
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVR--QHTGESPHKCNYCAKSFTRKEHLVNHVRQHT 573
GE +RC CS+ +T + H + C +C K FTRK+++ HV+
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 574 G 574
Sbjct: 65 K 65
Score = 76.8 bits (190), Expect = 1e-17
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVR--LHTGESPHKCHFCSKSFTRKEHLNNHIRL 683
GE ++C C + +T + H + C FC K FTRK+++ H+++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 684 HTG 686
Sbjct: 63 IHK 65
Score = 76.4 bits (189), Expect = 2e-17
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 654 RLHTGESPHKCHFCSKSFTRKEHLNNHIR--LHTGESPHKCDFCLKTFTRKEHLTNHLKQ 711
GE ++C CS+ +T + H + C FC K FTRK+++T H+K
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 712 HAG 714
Sbjct: 63 IHK 65
Score = 72.6 bits (179), Expect = 3e-16
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNH--IMWHTGETPHRCDFCSKTFTRKEHLLNHVRQ 543
+ + ++C++C++ +T +F H + C FC K FTRK+++ HV+
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 544 HTG 546
Sbjct: 63 IHK 65
Score = 71.8 bits (177), Expect = 6e-16
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 738 RSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVS 797
+ GE + C C + + N H + K+N + + C C K+FT K ++ +
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN----VKVYPCPFCFKEFTRKDNMTA 58
Query: 798 HLRSH 802
H++
Sbjct: 59 HVKII 63
Score = 71.8 bits (177), Expect = 7e-16
Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 26/88 (29%)
Query: 402 RCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHT 461
GE Y+C+ C + ++ + H
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSH--------------------------KR 36
Query: 462 GETPHVCQVCGKKYTRKEHLANHMRSHT 489
+ C C K++TRK+++ H++
Sbjct: 37 NVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 69.9 bits (172), Expect = 4e-15
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTR--CHTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
+ Y C VC + + + H Y C +C K F+RK++M HV+
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 434 G 434
Sbjct: 65 K 65
Score = 66.8 bits (164), Expect = 5e-14
Identities = 14/89 (15%), Positives = 23/89 (25%), Gaps = 26/89 (29%)
Query: 682 RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHT 741
GE ++C C + +T + H
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTS--------------------------HKR 36
Query: 742 GERPFACTDCGKSFPLKGNLLFHQRSHRK 770
+ + C C K F K N+ H + K
Sbjct: 37 NVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 60.3 bits (147), Expect = 9e-12
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRS--HLNERPHVCPHCSKSFVEHTCMIKHIRKNHTL 833
E ++C VC + +T + H + N + + CP C K F M H++ H +
Sbjct: 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 51.4 bits (124), Expect = 9e-09
Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 30/91 (32%)
Query: 318 RYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRH--TKR 375
+ C VC + + + + RH T
Sbjct: 3 FTKEGEHTYRCKVCSRV----------------------------YTHISNFCRHYVTSH 34
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTG 406
+ Y C C K F RK+++ H +
Sbjct: 35 KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 44.1 bits (105), Expect = 5e-06
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 298 HTCDLCGKFFPYRYQMIVHRR--YHTERKPFTCHVCGKAFDFQAELMSHGKCH 348
+ C +C + + + H + K + C C K F + + +H K
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 80.1 bits (198), Expect = 1e-18
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHT---GESPHKCDFCLKTFTRKEHLTNHLKQH 712
+G S +C C + +K LN H R H C+FC K F + + + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 713 AGETEHVCNICSKP 726
S P
Sbjct: 62 HPALLLAPQESSGP 75
Score = 78.2 bits (193), Expect = 5e-18
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHT---GDSPHKCNYCAKSFTRKEHLVNHVRQH 600
+G S +C C + +K L H R+H C +C K F + + + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 601 TGETPYQCQYCPKAFS 616
Q S
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 77.4 bits (191), Expect = 1e-17
Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 740 HTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHL 799
+G C CG + K +L +HQR H + F C+ C K F + +H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVA---ALRFPCEFCGKRFEKPDSVAAHR 58
Query: 800 RSHLNERPHVCPHCSK 815
S
Sbjct: 59 SKSHPALLLAPQESSG 74
Score = 77.4 bits (191), Expect = 1e-17
Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHT---GESPHKCHFCSKSFTRKEHLNNHIRLH 684
+G S +C C + +K LN H R H C FC K F + + + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 685 TGESPHKC 692
Sbjct: 62 HPALLLAP 69
Score = 76.3 bits (188), Expect = 3e-17
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHT---GESPHKCSYCKQSFTRKDHLNNHVRLH 656
+G + QC+ C +K L H R+H C +C + F + D + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 657 TGESPHKCHFCSK 669
S
Sbjct: 62 HPALLLAPQESSG 74
Score = 74.7 bits (184), Expect = 1e-16
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHT---GESPHKCNYCAKSFTRKEHLVNHVRQH 572
+G + +C+ C T +K L H R+H C +C K F + + + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 573 TGDSPHKCNYCAK 585
+
Sbjct: 62 HPALLLAPQESSG 74
Score = 74.7 bits (184), Expect = 1e-16
Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHT---GETPHRCEICKKAFTRKEHYVNHVMWH 460
+G + +C+ CG +K + H RKH CE C K F + + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 461 TGETPHVCQVCGKK 474
Q
Sbjct: 62 HPALLLAPQESSGP 75
Score = 74.7 bits (184), Expect = 1e-16
Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDT---PFKCEICTKSFTRKEHFTNHIMWH 516
+G + C++CG +K L H R H F CE C K F + + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 517 TGETPHRCDFCSK 529
S
Sbjct: 62 HPALLLAPQESSG 74
Score = 62.4 bits (152), Expect = 2e-12
Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHT---GERPFACTDCGKSFPLKGNLLFHQRSH 768
+G + C IC +K L H R H F C CGK F ++ H+
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 51.3 bits (123), Expect = 2e-08
Identities = 13/98 (13%), Positives = 24/98 (24%), Gaps = 25/98 (25%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSID 379
+ C +CG +A L H ++H + +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWH------------------------QRKHAETVA-A 36
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGK 417
+ C C K F + + + H Q
Sbjct: 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 50.9 bits (122), Expect = 3e-08
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTER---KPFTCHVCGKAFDFQAELMSHGKCHLGGSMY 354
C++CG + + H+R H E F C CGK F+ + +H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 355 TC 356
Sbjct: 68 AP 69
Score = 30.5 bits (69), Expect = 0.38
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 1/39 (2%)
Query: 298 HTCDLCGKFFPYRYQMIVHRR-YHTERKPFTCHVCGKAF 335
C+ CGK F + HR H G +
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 76.6 bits (189), Expect = 2e-17
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 587 FTRKEHLVNHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFT 644
+L+N+V PY C C + FSR D L H+R HTG+ P +C C ++F+
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 645 RKDHLNNHVRLHT 657
R DHL H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 76.2 bits (188), Expect = 2e-17
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 559 FTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFS 616
+L+N+V P+ C C + F+R + L H+R HTG+ P+QC+ C + FS
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 617 RKDHLVNHVRQHT 629
R DHL H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 75.8 bits (187), Expect = 3e-17
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 615 FSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFT 672
++L+N+V P+ C C + F+R D L H+R+HTG+ P +C C ++F+
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 673 RKEHLNNHIRLHT 685
R +HL HIR HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 72.3 bits (178), Expect = 5e-16
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 643 FTRKDHLNNHVRLHTGESPHKCH--FCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFT 700
++L N+V P+ C C + F+R + L HIR+HTG+ P +C C++ F+
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 701 RKEHLTNHLKQH 712
R +HLT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 71.2 bits (175), Expect = 2e-15
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 503 FTRKEHFTNHIMWHTGETPHRCD--FCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFT 560
+ N++ P+ C C + F+R + L H+R HTG+ P +C C ++F+
Sbjct: 3 PHPMNNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 561 RKEHLVNHVRQHT 573
R +HL H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 70.8 bits (174), Expect = 2e-15
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 531 FTRKEHLLNHVRQHTGESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFT 588
+LLN+V P+ C C + F+R + L H+R HTG P +C C ++F+
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 589 RKEHLVNHVRQHT 601
R +HL H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 68.9 bits (169), Expect = 9e-15
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 391 FARKEHLENHTRCHTGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFT 448
+L N+ PY C C + FSR + + H+R HTG+ P +C IC + F+
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 449 RKEHYVNHVMWHT 461
R +H H+ HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 68.9 bits (169), Expect = 1e-14
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 369 LQRHTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMV 426
L + RPY C V C + F+R + L H R HTG+ P++C+ C +NFSR +H+
Sbjct: 9 LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66
Query: 427 NHVRKHT 433
H+R HT
Sbjct: 67 THIRTHT 73
Score = 66.2 bits (162), Expect = 8e-14
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 477 RKEHLANHMRSHTNDTPFKC--EICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRK 534
+L N++ P+ C E C + F+R + T HI HTG+ P +C C + F+R
Sbjct: 5 PMNNLLNYVVPKMR--PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62
Query: 535 EHLLNHVRQHT 545
+HL H+R HT
Sbjct: 63 DHLTTHIRTHT 73
Score = 65.4 bits (160), Expect = 2e-13
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 447 FTRKEHYVNHVMWHTGETPHVCQV--CGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFT 504
+ +N+V P+ C V C ++++R + L H+R HT PF+C IC ++F+
Sbjct: 3 PHPMNNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 505 RKEHFTNHIMWHT 517
R +H T HI HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 64.6 bits (158), Expect = 3e-13
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 419 FSRKEHMVNHVRKHTGETPHRC--EICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYT 476
+++N+V P+ C E C + F+R + H+ HTG+ P C++C + ++
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 477 RKEHLANHMRSHT 489
R +HL H+R+HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 61.2 bits (149), Expect = 5e-12
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 671 FTRKEHLNNHIRLHTGESPHKCD--FCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFL 728
+L N++ P+ C C + F+R + LT H++ H G+ C IC + F
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 729 KKEHLVNHSRSHT 741
+ +HL H R+HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 56.5 bits (137), Expect = 2e-10
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 699 FTRKEHLTNHLKQHAGETEHVCNI--CSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFP 756
+L N+ + C + C + F + + L H R HTG++PF C C ++F
Sbjct: 3 PHPMNNLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 757 LKGNLLFHQRSH 768
+L H R+H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 51.5 bits (124), Expect = 1e-08
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 761 LLFHQRSHRKQNGEVLERPFKCDV--CPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFV 818
+ H ++ RP+ C V C + F+ L H+R H ++P C C ++F
Sbjct: 1 MEPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 819 EHTCMIKHIRKNHT 832
+ HIR HT
Sbjct: 61 RSDHLTTHIRT-HT 73
Score = 48.5 bits (116), Expect = 2e-07
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 354 YTCAV--CFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHT 405
Y C V C F+ + L RH + H+ +P+ C +CM+ F+R +HL H R HT
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 40.0 bits (94), Expect = 2e-04
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 316 HRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHT 373
+ +P+ C V C + F EL H + H G + C +C F+ + L H
Sbjct: 10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69
Query: 374 KRHS 377
+ H+
Sbjct: 70 RTHT 73
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 69.1 bits (170), Expect = 5e-15
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRK-HTGETPHRCEICKKAFT 448
+ + PY CQ CGK FSR +H+ H+++ HT E PH+C++ +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 65.7 bits (161), Expect = 8e-14
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQ-HTGETPYQCQYCPKAFS 616
+ + P+ C C K F+R +HL H++Q HT E P++CQ S
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 64.9 bits (159), Expect = 1e-13
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHI-RLHTGESPHKCDFCLKTFT 700
+ + P+ C C K F+R +HLN HI ++HT E PHKC + +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 64.1 bits (157), Expect = 3e-13
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQ-HTGESPHKCSYCKQSFT 644
+ + PY CQ C K FSR DHL H++Q HT E PHKC +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 63.8 bits (156), Expect = 4e-13
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRC-HTGETPYKCQYCGKNFS 420
S+ +PY C C K F+R +HL H + HT E P+KCQ S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 63.4 bits (155), Expect = 5e-13
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQ-HTGDSPHKCNYCAKSFT 588
+ + P+ C C K F+R +HL H++Q HT + PHKC +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 63.0 bits (154), Expect = 6e-13
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHV-RLHTGESPHKCHFCSKSFT 672
+ + P+ C C + F+R DHLN H+ ++HT E PHKC +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 61.4 bits (150), Expect = 2e-12
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQ-HTGESPHKCNYCAKSFT 560
+ P+ C C K F+R +HL H++Q HT E PHKC +
Sbjct: 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 58.4 bits (142), Expect = 3e-11
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRS-HTNDTPFKCEICTKSFT 504
+ P++CQ CGK ++R +HL H++ HT++ P KC++ +
Sbjct: 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 56.8 bits (138), Expect = 1e-10
Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 27/77 (35%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSR 738
+ + P+ C C K F+R +HL H+K +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIK---------------------------Q 34
Query: 739 SHTGERPFACTDCGKSF 755
HT ERP C
Sbjct: 35 VHTSERPHKCQVWVSGP 51
Score = 56.4 bits (137), Expect = 1e-10
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHI-MWHTGETPHRCDFCSKTFT 532
+ S + P+ C+ C K F+R +H HI HT E PH+C +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHV-MWHTGETPHVCQVCGKKYT 476
+ + P+ C+ C K F+R +H H+ HT E PH CQV +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 53.0 bits (128), Expect = 2e-09
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFH-QRSHRKQNGEVLERPFKCDVCPKDFT 790
+ S + +P+ C CGK F +L H ++ H ERP KC V +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH---TS---ERPHKCQVWVSGPS 52
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRS-HLNERPHVCPHCSKSF 817
+P+ C C K F+ HL H++ H +ERPH C
Sbjct: 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 42.2 bits (100), Expect = 1e-05
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 298 HTCDLCGKFFPYRYQMIVH-RRYHTERKPFTCHVCGKAF 335
+ C CGK F + H ++ HT +P C V
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKC-HLGGSMYTCAVCFHVFAN 365
+ KP+ C CGK F L H K H + C V ++
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 34.5 bits (80), Expect = 0.008
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S +P++C C K F + HI++ HT
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 69.0 bits (169), Expect = 9e-15
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 564 HLVNHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQY--CPKAFSRKD 619
+ H C++ C K++ + HL H R HTGE P+ C + C + F+R D
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 620 HLVNHVRQH 628
L H R H
Sbjct: 64 ELSRHRRTH 72
Score = 69.0 bits (169), Expect = 1e-14
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 648 HLNNHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCDF--CLKTFTRKE 703
+ + H C C K++ + HL H R HTGE P C + C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 704 HLTNHLKQH 712
L+ H + H
Sbjct: 64 ELSRHRRTH 72
Score = 65.1 bits (159), Expect = 2e-13
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 536 HLLNHVRQHTGESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCNY--CAKSFTRKE 591
+ H C++ C K++ + HL H R HTG+ P C++ C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 592 HLVNHVRQH 600
L H R H
Sbjct: 64 ELSRHRRTH 72
Score = 64.3 bits (157), Expect = 4e-13
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 508 HFTNHIMWHTGETPHRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCNY--CAKSFTRKE 563
+ + + H C C KT+ + HL H R HTGE P C++ C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 564 HLVNHVRQH 572
L H R H
Sbjct: 64 ELSRHRRTH 72
Score = 63.9 bits (156), Expect = 4e-13
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 592 HLVNHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCSY--CKQSFTRKD 647
+ + C + C K + + HL H R HTGE P CS+ C++ F R D
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 648 HLNNHVRLH 656
L+ H R H
Sbjct: 64 ELSRHRRTH 72
Score = 63.9 bits (156), Expect = 6e-13
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 620 HLVNHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLHTGESPHKCHF--CSKSFTRKE 675
+ H CS+ C +++ + HL H R HTGE P C + C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 676 HLNNHIRLH 684
L+ H R H
Sbjct: 64 ELSRHRRTH 72
Score = 63.6 bits (155), Expect = 8e-13
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 368 SLQRHTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQY--CGKNFSRKE 423
S R + CS C KT+ + HL+ HTR HTGE P+ C + C + F+R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 424 HMVNHVRKH 432
+ H R H
Sbjct: 64 ELSRHRRTH 72
Score = 62.8 bits (153), Expect = 1e-12
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 480 HLANHMRSHTNDTPFKCEI--CTKSFTRKEHFTNHIMWHTGETPHRCDF--CSKTFTRKE 535
+ + C C K++ + H H HTGE P C + C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 536 HLLNHVRQH 544
L H R H
Sbjct: 64 ELSRHRRTH 72
Score = 61.6 bits (150), Expect = 3e-12
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 424 HMVNHVRKHTGETPHRCEI--CKKAFTRKEHYVNHVMWHTGETPHVCQV--CGKKYTRKE 479
+ H C C K + + H H HTGE P C C +++ R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 480 HLANHMRSH 488
L+ H R+H
Sbjct: 64 ELSRHRRTH 72
Score = 59.7 bits (145), Expect = 1e-11
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 704 HLTNHLKQHAGETEHVCNI--CSKPFLKKEHLVNHSRSHTGERPFACT--DCGKSFPLKG 759
+ + H+C+ C K + K HL H+R+HTGE+PF+C+ C + F
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 760 NLLFHQRSH 768
L H+R+H
Sbjct: 64 ELSRHRRTH 72
Score = 55.1 bits (133), Expect = 7e-10
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 396 HLENHTRCHTGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRC--EICKKAFTR 449
+ + C + CGK + + H+ H R HTGE P C + C++ F R
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Score = 54.3 bits (131), Expect = 1e-09
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 452 HYVNHVMWHTGETPHVCQV--CGKKYTRKEHLANHMRSHTNDTPFKC--EICTKSFTRKE 507
+ + H+C CGK Y + HL H R+HT + PF C + C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 508 HFTNHIMWH 516
+ H H
Sbjct: 64 ELSRHRRTH 72
Score = 46.6 bits (111), Expect = 7e-07
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
Query: 732 HLVNHSRSHTGERPFACT--DCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDV--CPK 787
+ R C+ CGK++ +L H R+H E+PF C C +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH------TGEKPFSCSWKGCER 57
Query: 788 DFTCKGHLVSHLRSH 802
F L H R+H
Sbjct: 58 RFARSDELSRHRRTH 72
Score = 44.3 bits (105), Expect = 4e-06
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 777 ERPFKCDV--CPKDFTCKGHLVSHLRSHLNERPHVC--PHCSKSFVEHTCMIKHIRK 829
R C C K + HL +H R+H E+P C C + F + +H R
Sbjct: 15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Score = 37.8 bits (88), Expect = 8e-04
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 339 AELMSHGKCHLGGSMYTCAV--CFHVFANEESLQRHTKRHSIDRPYCCSV--CMKTFARK 394
+ + C+ C + L+ HT+ H+ ++P+ CS C + FAR
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 395 EHLENHTRCH 404
+ L H R H
Sbjct: 63 DELSRHRRTH 72
Score = 33.9 bits (78), Expect = 0.019
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 298 HTCDL--CGKFFPYRYQMIVHRRYHTERKPFTCHV--CGKAFDFQAELMSHGKCH 348
H C CGK + + H R HT KPF+C C + F EL H + H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 28.1 bits (63), Expect = 2.7
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Query: 792 KGHLVSHLRSHLNERPHVCPH--CSKSFVEHTCMIKHIRKNHT 832
R H+C H C K++ + + + H R HT
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-HT 43
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 66.3 bits (161), Expect = 3e-13
Identities = 18/109 (16%), Positives = 32/109 (29%), Gaps = 5/109 (4%)
Query: 616 SRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRL-----HTGESPHKCHFCSKS 670
S + TG S +C C ++ L H+ + S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 671 FTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHV 719
RK L + KC +C +F + L+ H+ + +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110
Score = 64.8 bits (157), Expect = 7e-13
Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 532 TRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVR--QHTGDSPHKCNYC---AKS 586
+ + TG S +C C+ ++ L H+ H D H+ + S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 587 FTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHT 629
RK L+ + + +C YC +F L H+ +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 62.5 bits (151), Expect = 6e-12
Identities = 13/103 (12%), Positives = 31/103 (30%), Gaps = 5/103 (4%)
Query: 392 ARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVR-----KHTGETPHRCEICKKA 446
+ + + TG + ++C+ C + + H+ + + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 447 FTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
RK + + C CG + + L+ HM
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 61.3 bits (148), Expect = 1e-11
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Query: 560 TRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQ-----HTGETPYQCQYCPKA 614
+ + TG S +C C+ ++ L H+ + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 615 FSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNH 652
RK L+ + + KC YC SF L+ H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 60.9 bits (147), Expect = 2e-11
Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 5/103 (4%)
Query: 672 TRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQ-----HAGETEHVCNICSKP 726
+ + + TG S +C C + LT H+ + N
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 727 FLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHR 769
+K L+ ++ C CG SF +L H +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 60.9 bits (147), Expect = 2e-11
Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 476 TRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSK------ 529
+ + T + F+C+ C+ ++ T H M TG
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH-MNETGHYRDDNHETDNNNPKRW 60
Query: 530 TFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHT 573
+ RK LL + + KC YC SF + L H+ +
Sbjct: 61 SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 59.4 bits (143), Expect = 7e-11
Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHL 795
+ TG F C DC ++ L H + + K L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNET-GHYRDDNHETDNNNPKRWSKPRKRSL 68
Query: 796 VSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNH 831
+ ++ C +C SF + H+ K
Sbjct: 69 LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 52.8 bits (126), Expect = 1e-08
Identities = 21/119 (17%), Positives = 32/119 (26%), Gaps = 23/119 (19%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTK 374
++ T F C C A+D EL H +
Sbjct: 9 LYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-----------------------ETGHY 45
Query: 375 RHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
R + + RK L + KC YCG +F + + H+ K
Sbjct: 46 RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 47.5 bits (112), Expect = 9e-07
Identities = 12/94 (12%), Positives = 24/94 (25%), Gaps = 5/94 (5%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTR-----CHTGETPYKCQYCGKNFSRK 422
S + + + + C C + L H + RK
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 423 EHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNH 456
++ K + +C C +F + H
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 37.4 bits (86), Expect = 0.004
Identities = 11/85 (12%), Positives = 23/85 (27%), Gaps = 5/85 (5%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRY-----HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGS 352
C C + ++ VH + + + + L+
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 353 MYTCAVCFHVFANEESLQRHTKRHS 377
+ C C H F + + L H +
Sbjct: 80 VLKCMYCGHSFESLQDLSVHMIKTK 104
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 63.7 bits (156), Expect = 3e-13
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAFSRK L++H R H GE P S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY+C CGK FSRK +++H R H GE P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 59.8 bits (146), Expect = 6e-12
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE+P++C+ C K+F+RK L++H R H G+ P +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 59.4 bits (145), Expect = 9e-12
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG++P++C+ C K+F+RK L++H R H GE P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE+P++CH C K+F+RK L +H R H GE P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE+P++C C ++F+RK L +H R H GE P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K F+RK L++H R H GE P +
Sbjct: 7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 51.7 bits (125), Expect = 5e-09
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE P+ C +CGK+F K L+ HQR+H E+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG------EKPSGP 43
Score = 49.8 bits (120), Expect = 3e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ + PY C C K F+RK L +H R H GE P
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE+P++C C K F+RK L +H + HAGE +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C C KAF+RK ++H H GE P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C C K+F+RK +H H GE P
Sbjct: 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C CGK ++RK L +H R+H + P
Sbjct: 7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C+ C K F +K L++H R+H GE+P +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 43.7 bits (104), Expect = 3e-06
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E P++C C K F+ K L+SH R+H E+P
Sbjct: 3 SGSSGTG------ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T P+ CH CGKAF + +L+SH + H G
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.012
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F +YQ+I H+R H KP
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.16
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E P+ C C K+F +I H R H
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR-THA 36
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 62.9 bits (154), Expect = 5e-13
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE Y C+ C K+FSR L+ H R H+GE P S
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 61.0 bits (149), Expect = 2e-12
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TGE Y C+ CGK+FSR ++ H R H+GE P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 59.5 bits (145), Expect = 1e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE + C C KSF+R L H RLH+GE P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ + C C KSF+R L+ H R H+GE P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE + C C KSF+R L+ H R H+G+ P +
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE + C C +SF+R L H RLH+GE P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE + C C K+F+R LL H R H+GE P +
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 51.0 bits (123), Expect = 9e-09
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+ + C +CGKSF LL H+R H E+P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG------EKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + + C+ C KSF+R H H+GE P
Sbjct: 1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE + C+ C K+F+R + H H+GE P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++ Y C C K+F+R L H R H+GE P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE + C C K+F+R L H + H+GE +
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ TGE + C+ CGK ++R L H R H+ + P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + C C K F + L+ H R H+GE+P +
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T K + C CGK+F L+ H + H G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+ + C C K F+ L+ H R H E+P
Sbjct: 3 SGSSGTG------EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.012
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+ + C C KSF C++KH R
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33
Score = 33.7 bits (78), Expect = 0.015
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
+ C CGK F ++ H R H+ KP
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 7e-13
Identities = 20/42 (47%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE PY C YC KAF LV H R HTGE P S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/41 (43%), Positives = 20/41 (48%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+GE PY C YCGK F +V H R HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P+ C+YC K+F LV H R HTG+ P +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P+ C+YC K+F LV H R HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P+ C +C K+F L H R+HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P+ C YC ++F L H R+HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 2e-09
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P+ CD+C K F L+ H R HTGE P +
Sbjct: 7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE+P+ C CGK+F L L+ HQR H E+P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG------EKPSGP 43
Score = 49.4 bits (119), Expect = 4e-08
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY C C K F L H R HTGE P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P+ C+ C KAF V H HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P+VC CGK + L H R HT + P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P+ CD+C K F L H + H GE +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+GE +VC+ C K F LV H R HTGE+P +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S + + P+ C+ C K+F H HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+ CD C K F LV H R H E+P
Sbjct: 3 SGSSGSG------EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C CGKAF AEL+ H + H G
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.020
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
CD CGK F +++ H+R HT KP
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+VC +C K+F +++H R
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 7e-13
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ +GE PY+C C K + R+ L H R HTGE S
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 62.2 bits (152), Expect = 1e-12
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ +GE PYKC CGK + R+ + H R HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 61.4 bits (150), Expect = 2e-12
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD 693
+ +GE P+KC C K + R+ L+ H R+HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 59.9 bits (146), Expect = 7e-12
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ +GE P+KC C K + R+ L H R HTG+ +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ +G+ P+KC C K + R+ L H R HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ +GE P+KC C + + R+ L+ H R+HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ +GE P++C C K + R+ L H R HTGE +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCD 783
+ S +GE+P+ C +CGK + + +L FHQR H E+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG------EKLSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY C C K + R+ L+ H R HTGE
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD 525
+ S + + P+KC C K + R+ H HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ +GE P++C C K + R+ H HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ +GE P+KC C K + R+ L H + H GE +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ +GE P+ C CGK Y R+ L H R HT +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC C K + + L H R H E+
Sbjct: 3 SGSSGSG------EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C CGK + + +L H + H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 32.1 bits (74), Expect = 0.052
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK + R + H+R HT K
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 29.8 bits (68), Expect = 0.29
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K + + H R HT
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-HT 36
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 8e-13
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE Y+C C KAF+RK L+ H R HTGE P S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE Y+C CGK F+RK ++ H R HTGE P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ ++C+ C K+F RK L+ H R HTGE P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE ++C+ C K+F RK L+ H R HTG+ P +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 4e-11
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE ++C C K+F RK L H R+HTGE P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE ++CS C ++F RK L H R+HTGE P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 53.3 bits (129), Expect = 2e-09
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE + C C K F RK L+ H R HTGE P +
Sbjct: 7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 3e-09
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGER + C++CGK+F K L+ HQR H E+P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG------EKPSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +R Y CS C K FARK L H R HTGE P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE + C C KAF RK + H HTGE P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + ++C C K+F RK H HTGE P
Sbjct: 1 GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C+ C K F +K L+ H R HTGE+P +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE ++C C K F RK L H + H GE +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 9e-07
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE + C CGK + RK L H R HT + P
Sbjct: 7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S ER ++C C K F K L+ H R H E+P
Sbjct: 3 SGSSGTG------ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T + + C CGKAF ++ L+ H + H G
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.010
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + +I+H+R HT KP
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.044
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S ER + C C K+F + +I H R HT
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI-HT 36
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.6 bits (153), Expect = 8e-13
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ GE PY C C KAFS K +L+ H+R H+GE P S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 59.9 bits (146), Expect = 6e-12
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ GE PY C CGK FS K +++ H+R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ G+ P+ C+ C K+F+ K +L+ H+R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ GE P+ C C K+F+ K +L H+R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+ GE P+ C+ C K+F+ K +L+ H+R H+G+ P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ GE P+ CS C ++F+ K +L H+R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 51.8 bits (125), Expect = 4e-09
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S GE+P+ C++CGK+F K L+ H R+H E+P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG------EKPSGP 43
Score = 51.0 bits (123), Expect = 9e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
+ GE P+ C C K F+ K +L+ H+R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY CS C K F+ K +L H R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ AGE + C+ C K F K +L+ H R+H+GE+P +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + P+ C C K+F+ K + H+ H+GE P
Sbjct: 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ GE P+ C C KAF+ K + + H+ H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ GE P+ C CGK ++ K +L HMR+H+ + P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
+ GE P+ C C K F+ K +L H++ H+GE
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 42.2 bits (100), Expect = 1e-05
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+ C C K F+ K +L+ H+R+H E+P
Sbjct: 3 SGSSGAG------EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
KP+ C CGKAF ++ L+ H + H G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + +I+H R H+ KP
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.051
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K+F + +I H+R H+
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HS 36
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.5 bits (153), Expect = 9e-13
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE PY+C C KAF R HL H R HTG P S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+GE PYKC CGK F R H+ H R HTG P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P+KC C K+F R HLN H R+HTG P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 59.4 bits (145), Expect = 1e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P+KC+ C K+F R HL H R HTG P +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P+KC+ C K+F R HL H R HTG P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 57.5 bits (140), Expect = 5e-11
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P+KCS C ++F R HLN H R+HTG P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 54.0 bits (131), Expect = 8e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P++C C K F R HL H R HTG P +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + P+KC C K+F R H H HTG P
Sbjct: 1 GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY CS C K F R HL H R HTG P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 49.4 bits (119), Expect = 4e-08
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P++C C KAF R H H HTG P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE+P+ C++CGK+F +L H+R H G RP
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH---TG---YRPSGP 43
Score = 48.6 bits (117), Expect = 5e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P+KC C K F R HL H + H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+GE P+ C CGK + R HL H R HT P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 39.8 bits (94), Expect = 7e-05
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC C K F HL H R H RP
Sbjct: 3 SGSSGSG------EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C CGKAF L H + H G
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 31.7 bits (73), Expect = 0.070
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + HRR HT +P
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 29.0 bits (66), Expect = 0.56
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F HT + +H R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 62.2 bits (152), Expect = 1e-12
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TG PY C C K FS K L+ H R HTG P S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 59.9 bits (146), Expect = 6e-12
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TG PY C C K FS K ++ H R HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 59.5 bits (145), Expect = 8e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG P+ C+ CAK+F+ K L+ H R HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TG P+ C+ CAK+F+ K L+ H R HTG P +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 57.5 bits (140), Expect = 5e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TG P+ C C+K+F+ K L H R HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TG P+ CS C ++F+ K L H R HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 53.7 bits (130), Expect = 1e-09
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TG P+ C C+KTF+ K L+ H R HTG P +
Sbjct: 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TG +P+ C+ C K+F LK L+ HQRSH +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG------VKPSGP 43
Score = 50.2 bits (121), Expect = 1e-08
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +PY CS C KTF+ K L H R HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TG P+ C C KTF+ K L H + H G +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TG P+ C C K F+ K + H HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ G + C+ C+K F K L+ H RSHTG +P +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T P+ C C K+F+ K H HTG P
Sbjct: 1 GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TG P+ C C K ++ K L H RSHT P
Sbjct: 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 42.9 bits (102), Expect = 7e-06
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S +P+ C C K F+ K L+ H RSH +P
Sbjct: 3 SGSSGTG------VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C C K F +++L+ H + H G
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 34.0 bits (79), Expect = 0.010
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
+ C C K F + Q+IVH+R HT KP
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 31.7 bits (73), Expect = 0.057
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S +P+ C C+K+F + +I H R HT
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HT 36
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.2 bits (152), Expect = 1e-12
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C+ C KAF++K HL H + HTGE P S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY+C+ C K F++K H+ H + HTGE P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C CSK+FT+K HL H + HTGE P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C C+K+FT+K HL H + HTGE P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++C C+K+FT+K HL H + HTG+ P +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 56.0 bits (136), Expect = 2e-10
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++C C ++FT+K HL H + HTGE P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 54.5 bits (132), Expect = 5e-10
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C CSK FT+K HL H + HTGE P +
Sbjct: 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C VC K F +K HL H + HTGE P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 49.5 bits (119), Expect = 3e-08
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C C K+F K +L HQ++H E+P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG------EKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++C C K FT+K HL H K H GE +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 7e-08
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C++C KAFT+K H H HTGE P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C++C+K+FT+K H H HTGE P
Sbjct: 1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C+VC K +T+K HLA H ++HT + P
Sbjct: 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C +CSK F +K HL H ++HTGE+P +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S GE +P++C VC K FT K HL H ++H E+P
Sbjct: 3 SGSSG---TGE---KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C VC KAF +A L H K H G
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.058
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C +C K F + + H++ HT KP
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C CSK+F + + +H +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK 33
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 1e-12
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY C C KAF+ + +L+ H + HT + P S
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PY C CGK F+ + +++ H + HT + P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+ C C K+FT + +L+ H + HT P +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+ C C K+FT + +L H ++HT + P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+ C C K+FT + +L+ H + HT + P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+ C+ C ++FT + +L H ++HT + P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P+ C C K FT + +L+ H + HT + P +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK+F ++ NL+ HQ+ H K ++P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK------QKPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P+ C C KAFT + + + H HT + P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+ C C K+FT + + H HT + P
Sbjct: 1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P++C CGK +T + +L H + HT P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + +L H + HT + P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+ C C K FT + +L H K H + +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE ++C C K F + +L+ H + HT ++P +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P+ C C K FT + +L+ H + H ++P
Sbjct: 3 SGSSGTG------EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF ++ L+ H K H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 32.9 bits (76), Expect = 0.022
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P++C C K+F + +IKH +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33
Score = 32.5 bits (75), Expect = 0.029
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F R +I H++ HT++KP
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 1e-12
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ +GE PY+C C K F++ HL NH R HTGE P S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 61.4 bits (150), Expect = 2e-12
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ +GE PYKC CGK F++ H+ NH R HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 6e-12
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ +GE P+KC+ C K FT+ HL NH R+HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 7e-12
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ +GE P+KCN C K FT+ HL NH R HTG+ P +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 1e-11
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ +G+ P+KCN C K FT+ HL NH R HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 56.7 bits (138), Expect = 1e-10
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ +GE P+KC+ C + FT+ HL NH R+HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 54.0 bits (131), Expect = 7e-10
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ +GE P++C+ C K FT+ HL NH R HTGE P +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY C+ C K F + HL NH R HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ +GE P+KC+ C K FT+ HLTNH + H GE +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + P+KC C K FT+ H TNH HTGE P
Sbjct: 1 GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 48.6 bits (117), Expect = 6e-08
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S +GE+P+ C +CGK F +L H R H E+P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG------EKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ +GE P++C C K FT+ H NH HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ +GE P+ C CGK +T+ HL NH R HT + P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K FT HL +H R H E+P
Sbjct: 3 SGSSGSG------EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C+ CGK F + L +H + H G
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.027
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + H R HT KP
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.29
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F +++ + H R
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 62.1 bits (152), Expect = 1e-12
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C KAF+RK L H + HTGE S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 60.6 bits (148), Expect = 3e-12
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TGE PYKC CGK F+RK + H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 60.6 bits (148), Expect = 4e-12
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KC+ C K+FTRK L H + HTG+ +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC C K+FTRK L+ H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 59.8 bits (146), Expect = 6e-12
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KC+ C K+FTRK L H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+KCS C ++FTRK L+ H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 54.4 bits (132), Expect = 5e-10
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P++C C K FTRK L H + HTGE +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 53.7 bits (130), Expect = 9e-10
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C+DCGK+F K L HQ+SH G ER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH---TG---ERHSGP 43
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY CS C K F RK L H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 49.8 bits (120), Expect = 3e-08
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++C C KAFTRK H HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 49.8 bits (120), Expect = 3e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K+FTRK H HTGE
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC C K FTRK L H + H GE +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ TGE P+ C CGK +TRK L H +SHT +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 46.3 bits (111), Expect = 3e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + C+ C K F +K L H +SHTGER +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC C K FT K L H +SH ER
Sbjct: 3 SGSSGTG------EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF ++ L H + H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + + +H++ HT +
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K+F + + H + HT
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HT 36
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 63.8 bits (155), Expect = 1e-12
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQ-HTGETPYQCQYCP--------KAFSRKDHLV 622
C ++F+ LV HV H G C K+F K LV
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 623 NHVRQHTGESPHKCS 637
NH+R HTGE S
Sbjct: 80 NHIRVHTGEKSGPSS 94
Score = 63.4 bits (154), Expect = 1e-12
Identities = 20/96 (20%), Positives = 28/96 (29%), Gaps = 21/96 (21%)
Query: 655 LHTGESPHKCHFCSKSFTRKEHLNNHI-RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHA 713
+ + C ++F+ L H+ H G C
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY----------------- 61
Query: 714 GETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
C K F K LVNH R HTGE+ +
Sbjct: 62 ---WEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 62.3 bits (151), Expect = 4e-12
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 9/74 (12%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQ-HTGESPHKCSYCK--------QSFTRKDHLN 650
+ + C + FS LV HV H G C +SF K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 651 NHVRLHTGESPHKC 664
NH+R+HTGE
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 61.9 bits (150), Expect = 5e-12
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 9/74 (12%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHV-RLHTGESPHKCHFCS--------KSFTRKEHLN 678
+ C ++F+ L HV H G H C KSF K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 679 NHIRLHTGESPHKC 692
NHIR+HTGE
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 60.8 bits (147), Expect = 1e-11
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQ-HTGESPHKCNYCA--------KSFTRKEHLV 566
+ C +TF+ L+ HV H G + C KSF K LV
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 567 NHVRQHTGDSPHKC 580
NH+R HTG+
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 60.0 bits (145), Expect = 2e-11
Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 21/94 (22%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRK-HTGETPHRCEICKKAFTRKEHYVNHVMWHTG 462
+ + C + FS +V HV H G +C W
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY--------------WEE- 64
Query: 463 ETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
C GK + K L NH+R HT +
Sbjct: 65 -----CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 59.6 bits (144), Expect = 3e-11
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 9/74 (12%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENH-TRCHTGETPYK--------CQYCGKNFSRKEHMV 426
C +TF+ L H T H G C GK+F K +V
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 427 NHVRKHTGETPHRC 440
NH+R HTGE
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 57.7 bits (139), Expect = 2e-10
Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 9/74 (12%)
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHI-MWHTGETPHRCDFCS--------KTFTRKEHLL 538
+ C ++F+ H+ M H G C K+F K L+
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 539 NHVRQHTGESPHKC 552
NH+R HTGE
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 52.3 bits (125), Expect = 1e-08
Identities = 22/94 (23%), Positives = 29/94 (30%), Gaps = 21/94 (22%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSH-GKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSI 378
+ C + F EL++H H+GG VC+
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW----------------- 62
Query: 379 DRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
C K+F K L NH R HTGE
Sbjct: 63 ---EECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 48.0 bits (114), Expect = 3e-07
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 740 HTGERPFACTDCGKSFPLKGNLLFH-QRSH--RKQNGEVLERPFKCDVCPKDFTCKGHLV 796
+ C ++F L+ H H + + +C K F K LV
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 797 SHLRSHLNERPHVC 810
+H+R H E+
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 34.2 bits (78), Expect = 0.027
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C GK F +Y+++ H R HT K
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 34.2 bits (78), Expect = 0.029
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 10/65 (15%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHL-RSHLNERPHV--------CPHCSKSFVEHTCMIKHI 827
+ C + F+ LV+H+ H+ CP KSF ++ HI
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82
Query: 828 RKNHT 832
R HT
Sbjct: 83 RV-HT 86
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 61.8 bits (151), Expect = 1e-12
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 598 RQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
+GE PY+C C KAF+RKD L++H R H GES
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 402 RCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+GE PY+C CGK F+RK+ +++H R H GE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 57.5 bits (140), Expect = 5e-11
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 654 RLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE+P++C C K+F RK+ L +H R H GES
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 57.1 bits (139), Expect = 5e-11
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G++P++C+ C K+F RK+ L++H R H GE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 57.1 bits (139), Expect = 6e-11
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+GE+P++C+ C K+F RK+ L++H R H G+S
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 56.0 bits (136), Expect = 2e-10
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE+P++CS C ++F RKD L +H R H GES
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 54.4 bits (132), Expect = 5e-10
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
+GE P+ C C K F RK+ L++H R H GES
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 49.8 bits (120), Expect = 2e-08
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 737 SRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE P+ C++CGK+F K L+ HQR+H E
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAG------ESGPSS 41
Score = 48.3 bits (116), Expect = 6e-08
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 374 KRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S + PY CS C K F RK+ L +H R H GE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P+ C CGK + RK+ L +H R+H ++
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P+ C C KAF RK+ ++H H GE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 45.6 bits (109), Expect = 8e-07
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 710 KQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+GE + C+ C K F +K+ L++H R+H GE +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 682 RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
+GE+P++C C K F RK+ L +H + HAGE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 44.0 bits (105), Expect = 3e-06
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ + P++C C K+F RK+ +H H GE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.8 bits (94), Expect = 7e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
E P++C C K F K L+SH R+H E
Sbjct: 8 ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 317 RRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ P+ C CGKAF+ + +L+SH + H G S +
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 33.3 bits (77), Expect = 0.015
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + Q+I H+R H +
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 28.2 bits (64), Expect = 0.94
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 800 RSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
E P+ C C K+F +I H R H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQR-THA 34
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 1e-12
Identities = 20/42 (47%), Positives = 22/42 (52%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+CQ C KAF HLV H H+GE P S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 19/41 (46%), Positives = 21/41 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PYKCQ CGK F H+V H H+GE P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC C K+F HL H +H+GE P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KC C K+F HLV H H+G+ P +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KC C K+F HLV H H+GE P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 54.8 bits (133), Expect = 4e-10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+KC C ++F HL H +H+GE P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C C K F HL+ H H+GE P +
Sbjct: 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C CGK+F + +L+ H H +G ERP
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH---SG---ERPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C VC K F HL H H+GE P
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 49.0 bits (118), Expect = 4e-08
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC++C K+F H H H+GE P
Sbjct: 1 GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C++C KAF H V H H+GE P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC C K F HL H H+GE +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ CQVCGK + HL H H+ + P
Sbjct: 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C +C K F HLV H H+GERP +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 42.5 bits (101), Expect = 9e-06
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC VC K F HLV H H ERP
Sbjct: 3 SGSSGTG------EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C VCGKAF + L+ H H G
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 32.1 bits (74), Expect = 0.052
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C +CGK F ++ H H+ +P
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 29.8 bits (68), Expect = 0.35
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + +++H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS 33
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 61.7 bits (151), Expect = 1e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
+ TG PY C C KAF K +L+ H R HTGES
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 60.2 bits (147), Expect = 5e-12
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TG PY C CGK F K +++ H R HTGE+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 59.4 bits (145), Expect = 9e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG P+ CN C K+F K +L+ H R HTGE+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 59.0 bits (144), Expect = 1e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TG P+ C+ C K+F K +L H R HTGES
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+ TG P+ CN C K+F K +L+ H R HTG+S
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TG P+ C+ C ++F K +L H R HTGES
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TG P+ C+ C K F K +L+ H R HTGES
Sbjct: 7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 52.1 bits (126), Expect = 3e-09
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TG +P+ C +CGK+F K L+ H R+H E
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG------ESGPSS 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +PY C+ C K F K +L HTR HTGE+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TG P+ C C KAF K + + H HTGE+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T P+ C C K+F K + H HTGE+
Sbjct: 1 GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+ G +VCN C K F K +L+ H+R+HTGE +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TG P+VC CGK + K +L H R+HT ++
Sbjct: 7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 45.9 bits (110), Expect = 6e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
+ TG P+ C+ C K F K +L H + H GE+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.9 bits (102), Expect = 6e-06
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S G +P+ C+ C K F K +L+ H R+H E
Sbjct: 3 SGSSG---TGM---KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF ++ L+ H + H G S +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 32.5 bits (75), Expect = 0.036
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S +P+VC C K+F + +I H R HT
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THT 36
Score = 32.1 bits (74), Expect = 0.041
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + +I+H R HT +
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.7 bits (151), Expect = 1e-12
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE P++C C KAF+ K +L+ H R HTGE P S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE P++C C K F+ K +++ H R HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 59.0 bits (144), Expect = 1e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P +C+ C K+F K +L+ H R HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 4e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P +C C K+F K +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 57.1 bits (139), Expect = 7e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+ TGE P +C+ C K+F K +L+ H R HTG+ P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 55.6 bits (135), Expect = 2e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P +CS C+++F K +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 55.6 bits (135), Expect = 2e-10
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+PF C++C K+F K NL+ HQR+H E+P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG------EKPSGP 43
Score = 50.9 bits (123), Expect = 9e-09
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TGE P C C K F K +L+ H R HTGE P
Sbjct: 7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ CS C K F K +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P C C+KAF K + + H HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 3e-07
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE C+ C K F K +L+ H R+HTGE+P +
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + PF+C C K+F K + H HTGE P
Sbjct: 1 GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 5e-07
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P C C K + K +L H R+HT + P
Sbjct: 7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
+ TGE P +C C K F K +L H + H GE
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+PF+C C K F K +L+ H R+H E+P
Sbjct: 3 SGSSGTG------EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.8 bits (89), Expect = 4e-04
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KPF C C KAF+ ++ L+ H + H G
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.015
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C C K F + +IVH+R HT KP
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.071
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C K+F + +I H R HT
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HT 36
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.7 bits (151), Expect = 1e-12
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE P++C+ C KAF + HL +H+R HTGE P S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+GE P+KC+ CGK F + H+ +H+R HTGE P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P KC C K+F + HL +H+R+HTGE P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 59.0 bits (144), Expect = 1e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P KC C K+F + HL +H+R HTG+ P +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P KC C K+F + HL +H+R HTGE P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 56.7 bits (138), Expect = 8e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
+GE P KC C ++F + HL +H+R+HTGE P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 54.0 bits (131), Expect = 7e-10
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P +C C K F + HL +H+R HTGE P +
Sbjct: 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++P+ C C K F + HL +H R HTGE P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 4e-08
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + PFKC+ C K+F + H +H+ HTGE P
Sbjct: 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 48.6 bits (117), Expect = 7e-08
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE+PF C +CGK+F +L H R H E+P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG------EKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+GE P C+ CGK + + HLA+H+R HT + P
Sbjct: 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P KC C K F + HL +HL+ H GE +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P +C+ C KAF + H +H+ HTGE P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+PFKC C K F HL SHLR H E+P
Sbjct: 3 SGSSGSG------EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KPF C CGKAF L SH + H G
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.028
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C CGK F + H R HT KP
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.23
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P C C K+F ++ + H+R
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.8 bits (151), Expect = 1e-12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE P++C C K+F + HL+ H R HTGE P S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 61.4 bits (150), Expect = 2e-12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE P+KC CGK+F + H++ H R HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE PHKCN C KSF + HL+ H R HTG+ P +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE PHKC+ C KSF + HL H R+HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 5e-12
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ PHKCN C KSF + HL+ H R HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 57.1 bits (139), Expect = 6e-11
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE PHKC+ C +SF + HL H R+HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 54.4 bits (132), Expect = 6e-10
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE PH+C+ C K+F + HL+ H R HTGE P +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGERP C +CGKSF +L+ HQR H E+P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG------EKPSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +RP+ C+ C K+F + HL H R HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P KC C KSF + H H HTGE P
Sbjct: 1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE PHKC+ C K+F + HL H + H GE +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE PH+C C K+F + H + H HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE PH C CGK + + HL H R HT + P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 7e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE H CN C K F++ HL+ H R HTGE+P +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 6e-06
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S ERP KC+ C K F HL+ H R H E+P
Sbjct: 3 SGSSGTG------ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T +P C+ CGK+F A L+ H + H G
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
H C+ CGK F +I H+R HT KP
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ERPH C C KSF++ +I+H R
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR 33
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 61.8 bits (151), Expect = 2e-12
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C+ C K F + L H HTGE P S
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 61.4 bits (150), Expect = 2e-12
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PYKC+ CGK F + + H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 59.5 bits (145), Expect = 9e-12
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC C K F + L H +HTGE P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KC C K F + L H HTG+ P +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KC C K F + L H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+KC C + F + L H +HTGE P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 2e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P++C+ C K F + L H HTGE P +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK F + +L H H E+P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG------EKPSGP 43
Score = 50.2 bits (121), Expect = 2e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KCE C K F + H M HTGE P
Sbjct: 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++CE C K F + H M HTGE P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P+ C+ CGK + + L H HT + P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K F + L H HTGE P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 46.8 bits (112), Expect = 2e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC+ C K F + L H H GE +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + C C K F+ + L H HTGE+P +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 8e-06
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K F C+ L +H H E+P
Sbjct: 3 SGSSGTG------EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGK F + +L +H H G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.022
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F R + H HT KP
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F+ + H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM 33
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 61.8 bits (151), Expect = 2e-12
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C+ C KAFS+ HL+ H R HTGE P S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 59.8 bits (146), Expect = 6e-12
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY+C+ CGK FS+ H++ H R HTGE P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++C C K+F++ HL+ H R HTG+ P +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C C K+F++ HL+ H R HTGE P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C C K+F++ HL H R+HTGE P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 54.8 bits (133), Expect = 5e-10
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++C C ++F++ HL H R+HTGE P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K F++ HL+ H R HTGE P +
Sbjct: 7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK+F +L+ HQR H E+P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K F++ HL H R HTGE P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++C C K F++ HL H + H GE +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C+ C KAF++ H + H HTGE P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C+ C K+F++ H H HTGE P
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C+ CGK +++ HL H R HT + P
Sbjct: 7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C C K F + HL+ H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C C K F+ HL+ H R H E+P
Sbjct: 3 SGSSGTG------EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF L+ H + H G
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.023
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F +I H+R HT KP
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.23
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + T +I+H R
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR 33
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.7 bits (151), Expect = 2e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY C C KAF+ + +L+ H + HTGE P S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 9e-12
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY C CGK F+ + +++ H + HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+ C C K+FT + +L+ H + HTG+ P +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQ 609
TG+ P+ C C K+FT + +L+ H + HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+ C C K+FT + +L H ++HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 56.0 bits (136), Expect = 1e-10
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+ C+ C ++FT + +L H ++HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K FT + +L+ H + HTGE P +
Sbjct: 7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGERP+ CT CGK+F + NL+ HQ+ H E+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG------EKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQ 413
+ +RPY C+VC K F + +L H + HTGE P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQ 469
TGE P+ C +C KAFT + + + H HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P++C VCGK +T + +L H + HT + P
Sbjct: 7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+ C C K FT + +L H K H GE +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
GE ++C +C K F + +L+ H + HTGE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + P+ C +C K+FT + + H HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 43.6 bits (104), Expect = 4e-06
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S ERP+ C VC K FT + +L+ H + H E+P
Sbjct: 3 SGSSGTG------ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45
Score = 39.0 bits (92), Expect = 2e-04
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T +P+ C VCGKAF ++ L+ H K H G
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.016
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C +CGK F R +I H++ HT KP
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.048
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ERP++C C K+F + + +IKH +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.7 bits (151), Expect = 2e-12
Identities = 19/42 (45%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K F R HL H HTGE P S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 61.3 bits (150), Expect = 2e-12
Identities = 19/42 (45%), Positives = 20/42 (47%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PYKC CGK F R H+ H HTGE P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 19/41 (46%), Positives = 21/41 (51%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KCH C K F R HL H +HTGE P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 8e-12
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KC+ C K F R HL H HTG+ P +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 58.6 bits (143), Expect = 2e-11
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KC+ C K F R HL H HTGE P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 56.7 bits (138), Expect = 1e-10
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
TGE P+KC C + F R HL H +HTGE P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 54.8 bits (133), Expect = 5e-10
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C C K F R HL H HTGE P +
Sbjct: 7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K F R HL H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 4e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K F R H H + HTGE P
Sbjct: 1 GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC C K F R HL H H GE +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 48.2 bits (116), Expect = 8e-08
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK + R HLA H HT + P
Sbjct: 7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK F +L HQ H G E+P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH---TG---EKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C C K F R H H + HTGE P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC C K F HL H H E+P
Sbjct: 3 SGSSGTG------EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ CH CGK F + L H H G
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.044
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C CGK F + H+ HT KP
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.46
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F ++ + +H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
GE Y+C C K FS+ HL H R HTGE P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 18/41 (43%), Positives = 20/41 (48%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
GE YKC CGK FS+ H+ H R HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 59.5 bits (145), Expect = 9e-12
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
GE +KC C K F++ HL H R+HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
GE +KC+ C K F++ HL H R HTG+ P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
G+ +KC+ C K F++ HL H R HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
GE +KC C + F++ HL H R+HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 54.5 bits (132), Expect = 5e-10
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
GE ++CD C K F++ HL H R HTGE P +
Sbjct: 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 4e-08
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S GE+ + C CGK F +L HQR H G E+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH---TG---EKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
++ Y C VC K F++ HL+ H R HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + +KC++C K F++ H H HTGE P
Sbjct: 1 GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
GE ++C++C K F++ H H HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
GE + C VCGK++++ HL H R HT + P
Sbjct: 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
GE +KCD C K F++ HL H + H GE +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C++C K F + HL H R HTGE+P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+ +KCDVC K+F+ HL +H R H E+P
Sbjct: 3 SGSSGMG------EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
K + C VCGK F + L +H + H G
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.026
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
CD+CGK F + H+R HT KP
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.65
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S + E+ + C C K F + + + H R
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR 33
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ +GE P+KC+ CGK F +H R H+GE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 61.4 bits (150), Expect = 2e-12
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ +GE P++C+ C K F +H R H+GE P S
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 59.5 bits (145), Expect = 1e-11
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQ 609
+ +G+ P KC C K F +H R H+GE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD 693
+ +GE P KC C K F +H R H+GE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ +GE P KC C K F +H R H+G+ P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 56.0 bits (136), Expect = 2e-10
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ +GE P KC C + F +H R H+GE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 52.2 bits (126), Expect = 3e-09
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ +GE P +C+ C K F +H R H+GE P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 51.8 bits (125), Expect = 5e-09
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCD 783
+ S +GE+PF C +CGK F HQRSH E+P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG------EKPSGPS 44
Score = 49.1 bits (118), Expect = 4e-08
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCG 472
+ +GE P +CE C K F +H H+GE P G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 48.3 bits (116), Expect = 7e-08
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCG 416
S ++P+ C C K F +H R H+GE P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD 525
+ S + + PFKCE C K F +H H+GE P
Sbjct: 1 GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ +GE P C+ CGK + +H RSH+ + P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ +GE P KC+ C K F +H + H+GE +
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCG 752
+ +GE C C K F +H RSH+GE+P + G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 44.1 bits (105), Expect = 3e-06
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+PFKC+ C K F SH RSH E+P
Sbjct: 3 SGSSGSG------EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KPF C CGK F ++ SH + H G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F Q H+R H+ KP
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.099
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C K F ++ H R H+
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HS 36
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TG+ PY+C C KAF K L+ H R HTGE P S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 59.9 bits (146), Expect = 6e-12
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TG+ PY+C CGK F K ++ H R HTGE P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG P++C C K+F K L+ H R HTGE P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 57.5 bits (140), Expect = 4e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TG+ P++C C K+F K L+ H R HTG+ P +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 57.2 bits (139), Expect = 6e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TG+ P++C C K+F K L H R HTGE P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 54.5 bits (132), Expect = 5e-10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TG+ P++C C ++F K L H R HTGE P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TG+ P+ C C K F K L+ H R HTGE P +
Sbjct: 7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 52.2 bits (126), Expect = 3e-09
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TG+RP+ C +CGK+F K +L+ H+RSH E+P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG------EKPSGP 43
Score = 50.2 bits (121), Expect = 2e-08
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ RPY C C K F K L H R HTGE P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TG+ P+ C C KAF K + H HTGE P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TG+ P++C C K F K L H + H GE +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T P++C C K+F K H HTGE P
Sbjct: 1 GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
G+ + C C K F K L+ H RSHTGE+P +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TG+ P+ C CGK + K L H RSHT + P
Sbjct: 7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S +RP++C C K F K L+ H RSH E+P
Sbjct: 3 SGSSGTG------QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T ++P+ C CGKAF ++ L+ H + H G
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.004
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + +I HRR HT KP
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.034
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S +RP+ C C K+F + +I H R +HT
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHT 36
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K+F +K L H R HTGE+P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 59.5 bits (145), Expect = 8e-12
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY+C CGK+F +K + H R HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C C KSF +K L+ H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C+ C KSF +K L H R HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++CS C +SF +K L+ H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 57.2 bits (139), Expect = 7e-11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++C+ C KSF +K L H R HTG++P +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 52.2 bits (126), Expect = 3e-09
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C+DCGKSF K L HQR H E P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG------ENPSGP 43
Score = 52.2 bits (126), Expect = 4e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K+F +K L H R HTGE+P +
Sbjct: 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 48.3 bits (116), Expect = 7e-08
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY CS C K+F +K L H R HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C C KSF +K H HTGE P
Sbjct: 1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C C K+F +K H HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++C C K+F +K L H + H GE +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 45.2 bits (108), Expect = 9e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
GE + C+ C K F+KK L H R HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C CGK + +K L H R HT + P
Sbjct: 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 42.9 bits (102), Expect = 7e-06
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C C K F K L H R H E P
Sbjct: 3 SGSSGTG------EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGK+F +++L H + H G +
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.5 bits (75), Expect = 0.034
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + Q+ VH+R HT P
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.12
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C KSF++ + + H R HT
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HT 36
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE P+QC+ C K F++ HL +H R HTGE P S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 60.3 bits (147), Expect = 5e-12
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+GE P++C+ CGK F++ H+ +H R HTGE P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P +C C K FT+ HL++H R+HTGE P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P +C C K FT+ HL +H R HTGE P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P +C C K FT+ HL +H R HTG+ P +
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 56.4 bits (137), Expect = 1e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
+GE P +C C + FT+ HL++H R+HTGE P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 9e-10
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P +C+ C K FT+ HL +H R HTGE P +
Sbjct: 7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 3e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++P+ C C K F + HL +H R HTGE P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE+PF C +CGK F +L HQR H E+P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG------EKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + PF+CE C K FT+ H +H HTGE P
Sbjct: 1 GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P +C+ C K FT+ HL +H + H GE +
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P C+ CGK++T+ HL +H R HT + P
Sbjct: 7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P +CE C K FT+ H +H HTGE P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+GE C C K F + HL +H R HTGE+P +
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 6e-06
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+PF+C+ C K FT HL SH R H E+P
Sbjct: 3 SGSSGSG------EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KPF C CGK F + L SH + H G
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C+ CGK F + H+R HT KP
Sbjct: 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 28.7 bits (65), Expect = 0.70
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P C C K F +++ + H R
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR 33
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE P++C C K+++++ HL H R HTGE P S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE P+KC CGK+++++ H+ H R HTGE P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 6e-12
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P KC C KS+ ++ HL H R+HTGE P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 59.8 bits (146), Expect = 7e-12
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P KC C KS+ ++ HL H R HTG+ P +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P KC C KS+ ++ HL H R HTGE P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 56.8 bits (138), Expect = 9e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P KC C +S+ ++ HL H R+HTGE P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 54.4 bits (132), Expect = 6e-10
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P +C C K++ ++ HL H R HTGE P +
Sbjct: 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+PF C +CGKS+ + +L HQR H E+P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG------EKPSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C C K++ ++ HL H R HTGE P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P KC C K++ ++ HLT H + H GE +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + PFKC C KS+ ++ H T H HTGE P
Sbjct: 1 GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P C CGK Y ++ HL H R HT + P
Sbjct: 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P +C C K++ ++ H H HTGE P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 7e-06
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+PFKC C K + + HL H R H E+P
Sbjct: 3 SGSSGTG------EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KPF C CGK+++ + L H + H G
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK + R + H+R HT KP
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.17
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P C C KS+ + + +H R
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR 33
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 61.4 bits (150), Expect = 2e-12
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TG+ P++C +C K+F K +LV H R HTGE S
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 59.9 bits (146), Expect = 6e-12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TG+ P++C +CGK+F K ++V H R HTGE
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 59.5 bits (145), Expect = 1e-11
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TG+ P +C +C KSF K +LV H R HTG+ +
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG P +C +C KSF K +LV H R HTGE
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TG+ P +C C KSF K +L H R+HTGE
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 56.0 bits (136), Expect = 1e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TG+ P +C++C +SF K +L H R+HTGE
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 54.1 bits (131), Expect = 6e-10
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TG++PF CT CGKSF KGNL+ HQR H E+
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG------EKSGPS 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TG+ P C C K+F K +L+ H R HTGE +
Sbjct: 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +P+ C+ C K+F K +L H R HTGE
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T PF+C C KSF K + H HTGE
Sbjct: 1 GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TG+ P +C C K+F K +L H + H GE +
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TG+ P C C K+F K + V H HTGE
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TG+ P C CGK + K +L H R HT +
Sbjct: 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ G+ C C K F K +LV H R HTGE+ +
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S ++PF+C C K F KG+LV+H R H E+
Sbjct: 3 SGSSGTG------QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T +KPF C CGK+F + L++H + H G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 32.9 bits (76), Expect = 0.024
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + ++ H+R HT K
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 31.0 bits (71), Expect = 0.13
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ++P C HC KSF ++ H R
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQR 33
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE P+KC CGK+F + + H HT E P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 61.4 bits (150), Expect = 2e-12
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD 693
+ TGE P KC C KSF + LN H +HT E P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE P++C C K+F + L H HT E P S
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P KC+ C KSF + L H HT + P +
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P KC+ C KSF + L H HT E P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 57.5 bits (140), Expect = 4e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P KC C +SF + LN H +HT E P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 54.0 bits (131), Expect = 7e-10
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P +CD C K+F + L H HT E P +
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD 525
+ S T + PFKC+IC KSF + H M HT E P
Sbjct: 1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCD 783
+ S TGE+PF C CGKSF + L H H E+P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH---TA---EKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P +C+IC K+F + H M HT E P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 48.6 bits (117), Expect = 6e-08
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P KCD C K+F + L H H E +
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 48.6 bits (117), Expect = 7e-08
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C +C K+F + L H+ HT E P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P C +CGK + + L H HT + P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 45.6 bits (109), Expect = 7e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE C+IC K F + L HS HT E+P +
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+PFKCD+C K F + L H H E+P
Sbjct: 3 SGSSGTG------EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KPF C +CGK+F ++ L H H
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 32.8 bits (76), Expect = 0.021
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
CD+CGK F R ++ H HT KP
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 30.2 bits (69), Expect = 0.23
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C KSF + + +H HT
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HT 36
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 20/42 (47%), Positives = 22/42 (52%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY C C K+F +K HL H R HTGE P S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY C CGK+F +K H+ H R HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 59.8 bits (146), Expect = 6e-12
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+ CN C KSF +K HL H R HTG+ P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 59.8 bits (146), Expect = 7e-12
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+ C+ C KSF +K HLN H R+HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+ CN C KSF +K HL H R HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 56.8 bits (138), Expect = 7e-11
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+ C+ C +SF +K HLN H R+HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C+ C K+F +K HL H R HTGE P +
Sbjct: 7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGKSF K +L H+R H E+P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG------EKPSGP 43
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K+F +K HL H R HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 4e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+ C C KSF +K H H HTGE P
Sbjct: 1 GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+ C+ C K+F +K HL H + H GE +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C C K+F +K H H HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P++C CGK + +K HL H R HT + P
Sbjct: 7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 8e-07
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE ++CN C K F++K HL H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+ C+ C K F K HL H R H E+P
Sbjct: 3 SGSSGTG------EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGK+F ++ L H + H G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.036
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P++C C KSF++ + + +H R
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33
Score = 31.7 bits (73), Expect = 0.063
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + + HRR HT KP
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 61.4 bits (150), Expect = 2e-12
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE P++C C K FSR+ L H + HTGE P S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TGE P+KC CGK FSR+ + H + HTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 6e-12
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P KC C K F+R+ LN H +LHTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P KC C K F+R+ L H + HTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 57.5 bits (140), Expect = 4e-11
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P KC C + F+R+ LN H +LHTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 57.1 bits (139), Expect = 7e-11
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P KC C K F+R+ L H + HTG+ P +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+PF C +CGK F + L H + H E+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG------EKPSGP 43
Score = 51.0 bits (123), Expect = 9e-09
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P +C C K F+R+ L H + HTGE P +
Sbjct: 7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 5e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + PFKC C K F+R+ H HTGE P
Sbjct: 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C C K F+R+ L H + HTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P +C C K F+R+ H HTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P KC C K F+R+ L H K H GE +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 6e-07
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P C CGK ++R+ L H + HT + P
Sbjct: 7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+PFKC C K F+ + L H + H E+P
Sbjct: 3 SGSSGTG------EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 6e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KPF C CGK F ++ L H K H G
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F R + VH + HT KP
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.30
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C K F + + H + HT
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-HT 36
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 61.0 bits (149), Expect = 2e-12
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
TGE PY+C C K FSRKD LV+H + H+G+S
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY+C CGK FSRK+ +V+H + H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 57.1 bits (139), Expect = 6e-11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
TGE+P++C C K F+RK+ LV+H + H+G S
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG++P++C C K F+RK+ LV+H + H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 56.0 bits (136), Expect = 1e-10
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE+P++C C K F+RK+ L +H + H+G+S
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 54.4 bits (132), Expect = 5e-10
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE+P++C C + F+RKD L +H + H+G+S
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 52.5 bits (127), Expect = 2e-09
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TGE P+ C C K F+RK+ L++H + H+G+S
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 51.0 bits (123), Expect = 9e-09
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE P+ C +CGK F K L+ HQ++H +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG------QSGPSS 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ + PY C C K F+RK+ L +H + H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C CGK ++RK+ L +H ++H+ +
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C C K F+RK+ V+H H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
GE + C C K F +K+ LV+H ++H+G+ +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 44.0 bits (105), Expect = 2e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + P++C C K F+RK+ +H H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 43.3 bits (103), Expect = 4e-06
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
TGE+P++C C K F+RK+ L +H K H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E P++C C K F+ K LVSH ++H +
Sbjct: 3 SGSSGTG------ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 36.7 bits (86), Expect = 9e-04
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T P+ C CGK F + +L+SH K H G S +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 32.1 bits (74), Expect = 0.040
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + Q++ H++ H+ + +
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.26
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E P+ C C K F ++ H +K H+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSH-QKTHS 36
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE P++C C K+FS L H R HTGE P S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 1e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE P++C CGK+FS + H R HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P +C C KSF+ L H R HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P +C C KSF+ L H R+HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 55.6 bits (135), Expect = 2e-10
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
TGE P +C C KSF+ L H R HTG+ P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P +C+ C +SF+ L H R+HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 51.0 bits (123), Expect = 1e-08
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+PF C +CGKSF + L HQR H E+P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG------EKPSGP 43
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TGE P C C K+F+ L H R HTGE P
Sbjct: 7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C+ C K+F+ L H R HTGE P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P C C K+F+ H HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + PF+C C KSF+ H HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P C CGK ++ LA H R HT + P
Sbjct: 7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE C C K F L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
TGE P +C C K+F+ L H + H GE
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+PF+C C K F+ L +H R H E+P
Sbjct: 3 SGSSGTG------EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45
Score = 37.1 bits (87), Expect = 7e-04
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KPF C CGK+F ++L +H + H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.041
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F Q+ H+R HT KP
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P C C KSF + + H R
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQR 33
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 2e-12
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C KAF++K +L H R HTGE P S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 9e-12
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TGE PY+C CGK F++K ++ H R HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P++C C K+F +K +L H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P++C C K+F +K +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P++C C K+F +K +L H R HTG+ P +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 55.6 bits (135), Expect = 2e-10
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P++C C ++F +K +L H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+RC C K F +K +L H R HTGE P +
Sbjct: 7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK+F K NL HQR H E+P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG------EKPSGP 43
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K FA+K +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C C K+F +K + T H HTGE P
Sbjct: 1 GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P++C C K F +K +LT H + H GE +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P+RC C KAF +K + H HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ TGE P+ C CGK + +K +L H R HT + P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + C C K F +K +L H R HTGE+P +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 2e-05
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C C K F K +L H R H E+P
Sbjct: 3 SGSSGTG------EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 5e-04
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF +A L H + H G
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.082
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + + H+R HT KP
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.16
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + + +H R
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC C KSFT K L H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 60.6 bits (148), Expect = 3e-12
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C K+F+ K L H + HTGE S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 60.2 bits (147), Expect = 4e-12
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TGE PYKC CGK+F+ K + H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 59.9 bits (146), Expect = 8e-12
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KC+ C KSFT K L H + HTG+ +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+KCS C +SFT K L H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KC+ C KSFT K L H + HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P++C C K+FT K L H + HTGE +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 54.1 bits (131), Expect = 7e-10
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C+DCGKSF K L HQ+ H ER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG------ERHSGP 43
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C KSFT K H HTGE
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY CS C K+F K L H +CHTGE
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 49.1 bits (118), Expect = 5e-08
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC C K+FT K L H K H GE +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++C C K+FT K H HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + C+ C K F K L H + HTGER +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ TGE P+ C CGK +T K L H + HT +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 43.7 bits (104), Expect = 3e-06
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC C K FT K L H + H ER
Sbjct: 3 SGSSGTG------EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGK+F +++ L H KCH G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 33.3 bits (77), Expect = 0.018
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F ++ ++ +H++ HT +
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.0 bits (71), Expect = 0.13
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C KSF + + H + HT
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HT 36
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ + E PY+C+ C K ++R+ +L H R H GE S
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ + E P+KC C K + R+ +L+ H R+H GE
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 59.8 bits (146), Expect = 7e-12
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ + E PYKC+ CGK ++R+ ++ H R H GE
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ + E P+KC C K + R+ +L H R H G+ +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ + + P+KC C K + R+ +L H R H GE
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 57.5 bits (140), Expect = 5e-11
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ + E P+KC C + + R+ +L+ H R+H GE
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 54.8 bits (133), Expect = 5e-10
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S + E+P+ C DCGK + + NL HQR H E+
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG------EKTSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ + E P++C+ C K + R+ +L H R H GE +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S+++PY C C K + R+ +L+ H R H GE
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + P+KCE C K + R+ + H H GE
Sbjct: 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 48.6 bits (117), Expect = 7e-08
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ + E P+KC+ C K + R+ +L H + H GE +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ + E P++CE C K + R+ + H H GE
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ + E P+ C+ CGK Y R+ +L H R H +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K + + +L H R H+ E+
Sbjct: 3 SGSSGSV------EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C CGK ++ + L H + H+G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 32.5 bits (75), Expect = 0.038
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK + R + +H+R H K
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 30.9 bits (71), Expect = 0.13
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K + + H R
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE P+ C C K F+ K +L+ H + HTGE P S
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 59.8 bits (146), Expect = 6e-12
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ TGE P+ C CGK F+ K +++ H + HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 59.4 bits (145), Expect = 1e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG++P C+ C K FT K +L+ H + HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 59.0 bits (144), Expect = 1e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE+P C C K FT K +L H ++HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE+P C+ C K FT K +L+ H + HTG+ P +
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 56.4 bits (137), Expect = 1e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE+P CS C + FT K +L H ++HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE PF C++CGK F K NL+ HQ+ H ERP
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG------ERPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P C C K FT K +L+ H + HTGE P +
Sbjct: 7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 48.6 bits (117), Expect = 6e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ + P+ CS C K F K +L H + HTGE P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE +C+ C K F K +L+ H + HTGERP +
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P C C K FT K + + H HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE+P C C K FT K +L H K H GE +
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ TGE P +C CGK +T K +L H + HT + P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + PF C C K FT K + H HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 42.9 bits (102), Expect = 7e-06
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E PF C C K FT K +L+ H + H ERP
Sbjct: 3 SGSSGTG------ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T PF C CGK F + L+ H K H G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F ++ +I+H++ HT +P
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E P +C C K F T +I H + HT
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HT 36
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE PY C C K F R HL+ H+++H E S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+GE PY C CGKNF R H++ H+++H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P+ C+ C K+F R HL H++ H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 57.5 bits (140), Expect = 4e-11
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P+ CN C K+F R HL+ H+++H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 57.1 bits (139), Expect = 7e-11
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P+ CN C K+F R HL+ H+++H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 55.6 bits (135), Expect = 2e-10
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P+ C+ C ++F R HL H++ H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 52.1 bits (126), Expect = 3e-09
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P+ C+ C K F R HL+ H+++H E +
Sbjct: 7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GERP+ C +CGK+F +L+ H + H + E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR------EKSSGP 43
Score = 51.0 bits (123), Expect = 8e-09
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S +RPY C+ C K F R HL H + H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P+ C CGK + R HL H++ H +
Sbjct: 7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P+ C+ C K F R HL HLK+H E +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P+ C C K F R H + H+ H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + P+ C C K+F R H H+ H E
Sbjct: 1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S +GE RP+ C+ C K+F HL+ HL+ H E+
Sbjct: 3 SGSSG---SGE---RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCA 357
+ +P+ C+ CGK F + L+ H K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 32.5 bits (75), Expect = 0.032
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F +I H + H K
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.1 bits (74), Expect = 0.041
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ERP+ C C K+F H+ +I+H++
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK 33
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C+ C K ++ K +L H + HTGE P S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 59.8 bits (146), Expect = 6e-12
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PYKC+ CGK ++ K ++ H + HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 59.5 bits (145), Expect = 8e-12
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC C K + K +L+ H ++HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KC C K + K +L H + HTG+ P +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KC C K + K +L H + HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
TGE P+KC C + + K +L+ H ++HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 53.3 bits (129), Expect = 1e-09
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K + K +L H + HTGE P +
Sbjct: 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 52.1 bits (126), Expect = 3e-09
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C CGK + K NL HQ+ H ERP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG------ERPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KCE C K + K + H HTGE P
Sbjct: 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K + K +L+ H + HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++CE C K + K + H HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC+ C K + K +L H K H GE +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 45.6 bits (109), Expect = 7e-07
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C+ CGK Y K +L H + HT + P
Sbjct: 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K + K +L H + H ERP
Sbjct: 3 SGSSGTG------EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGK ++ + L H K H G
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 32.1 bits (74), Expect = 0.049
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C+ CGK + ++ + +H++ HT +P
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 29.0 bits (66), Expect = 0.59
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K + + H + HT
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HT 36
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 61.0 bits (149), Expect = 3e-12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
TGE PY+C C KAF+ K +L+ H R HTGES
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 59.8 bits (146), Expect = 6e-12
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY+C C K F+ K +++ H R HTGE+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 59.0 bits (144), Expect = 1e-11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++CN C K+F K +L+ H R HTGE+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C+ C K+F K +L H R HTGES
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 57.5 bits (140), Expect = 5e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
TGE P++CN C K+F K +L+ H R HTG+S
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 55.6 bits (135), Expect = 2e-10
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++C+ C+++F K +L H R HTGES
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +C K+F K NL+ HQR+H E
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG------ESGPSS 43
Score = 51.7 bits (125), Expect = 5e-09
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TGE P+ C+ C K F K +L+ H R HTGES
Sbjct: 7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 48.6 bits (117), Expect = 7e-08
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F K +L H R HTGE+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C C+KAF K + + H HTGE+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C C K+F K + H HTGE+
Sbjct: 1 GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
GE + CN C K F K +L+ H R+HTGE +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 45.9 bits (110), Expect = 6e-07
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C C K + K +L H R+HT ++
Sbjct: 7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 45.5 bits (109), Expect = 7e-07
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
TGE P++C+ C K F K +L H + H GE+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 42.9 bits (102), Expect = 6e-06
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S GE +P++C+ C K F K +L+ H R+H E
Sbjct: 3 SGSSG---TGE---KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ C KAF+ ++ LM H + H G S +
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 33.2 bits (77), Expect = 0.016
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ C K F + ++VH+R HT +
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.5 bits (70), Expect = 0.16
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K+F + ++ H R HT
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THT 36
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ +GE P++C+ C K F++ L +H R HTGE P S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ +GE P+KC+ CGK F++ + +H R HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 60.2 bits (147), Expect = 6e-12
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ +GE P KC C K FT+ L++H R+HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ +GE P KC C K FT+ L +H R HTG+ P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ +G+ P KC C K FT+ L +H R HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 56.8 bits (138), Expect = 8e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ +GE P KC C + FT+ L++H R+HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 1e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ +GE P +C+ C K FT+ L +H R HTGE P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++P+ C C K F + L +H R HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S +GE+PF C +CGK F L HQR H E+P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG------EKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + PFKCE C K FT+ +H HTGE P
Sbjct: 1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ +GE P +CE C K FT+ +H HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ +GE P KC+ C K FT+ L +H + H GE +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 3e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ +GE P C+ CGK++T+ L +H R HT + P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ +GE C C K F + L +H R HTGE+P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+PFKC+ C K FT L SH R H E+P
Sbjct: 3 SGSSGSG------EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KPF C CGK F ++L SH + H G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.041
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F Q+ H+R HT KP
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.55
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P C C K F +++ + H R
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TG ++C C KAF+RK L H + HTGE P S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 59.5 bits (145), Expect = 9e-12
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TG ++C CGK F+RK + H + HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TG +C C K+FTRK L+ H ++HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG +C C K+FTRK L H + HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TG +C C K+FTRK L H + HTG+ P +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TG +C+ C ++FTRK L+ H ++HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TG C C K FTRK L H + HTGE P +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 5e-09
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TG + F CT+CGK+F K L HQ+ H E+P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ + + C+ C K F RK L H + HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T F+C C K+FTRK + H HTGE P
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TG C C KAFTRK H HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TG +C C K FTRK L+ H K H GE +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TG C CGK +TRK L+ H + HT + P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 8e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ G C C K F +K L H + HTGE+P +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S + F+C C K FT K L H + H E+P
Sbjct: 3 SGSSGTG------GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T K F C CGKAF ++ L H K H G
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.089
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + + +H++ HT KP
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.23
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S + C C K+F + + H + HT
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHT 36
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE Y+C C K FSR L H + HTGE P S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE YKC CGK FSR + H + HTGE P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE +KCN C K F+R L H + HTG+ P +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE +KC+ C K F+R L+ H ++HTGE P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ +KCN C K F+R L H + HTGE P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 55.6 bits (135), Expect = 2e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
TGE +KC+ C + F+R L+ H ++HTGE P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 1e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE ++C+ C K F+R L H + HTGE P +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++ Y C+ C K F+R L H + HTGE P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE +KC+ C K F+R L+ H K H GE +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+ + C +CGK F L HQ+ H G E+P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH---TG---EKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + +KC C K F+R + H HTGE P
Sbjct: 1 GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE + C CGK ++R L+ H + HT + P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE ++C C K F+R H HTGE P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+ +KC+ C K F+ L H + H E+P
Sbjct: 3 SGSSGTG------EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T K + C+ CGK F ++L H K H G
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.035
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C+ CGK F Q+ H++ HT KP
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.88
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+ + C C K F ++ + +H +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C K F++ HLV H HTGE P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 60.6 bits (148), Expect = 4e-12
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PYKC CGK F++ H+V H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 59.0 bits (144), Expect = 1e-11
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC+ C K FT+ HL H +HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 58.6 bits (143), Expect = 2e-11
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KCN C K FT+ HLV H HTG+ P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KCN C K FT+ HLV H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+KC+ C + FT+ HL H +HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P++C+ C K FT+ HL+ H HTGE P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 48.6 bits (117), Expect = 7e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + HL H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK F +L+ H+ H E+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG------EKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC+ C K FT+ HL H H GE +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++C C K FT+ H V H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 45.9 bits (110), Expect = 6e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K FT+ H H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 45.5 bits (109), Expect = 6e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P+ C CGK +T+ HL H HT + P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 4e-06
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + CN C K F + HLV H HTGE+P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 3e-05
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P+KC+ C K FT HLV H H E+P
Sbjct: 3 SGSSGTG------EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45
Score = 37.8 bits (89), Expect = 4e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGK F + L+ H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.033
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F ++ HR HT KP
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.46
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F +++ +++H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.7 bits (148), Expect = 3e-12
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C KAF H R HTG+ P S
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 60.3 bits (147), Expect = 5e-12
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PYKC CGK F H R HTG+ P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 58.4 bits (142), Expect = 2e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC C K+F H RLHTG+ P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 57.6 bits (140), Expect = 4e-11
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KC C K+F H R HTG P +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 57.2 bits (139), Expect = 6e-11
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KC C K+F H R HTG+ P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 54.9 bits (133), Expect = 4e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+KC C ++F H RLHTG+ P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 52.2 bits (126), Expect = 3e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P++C C K F H R HTG+ P +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 49.9 bits (120), Expect = 2e-08
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK+F + HQR H +RP
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG------QRPSGP 43
Score = 47.6 bits (114), Expect = 1e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K+F T H HTG+ P
Sbjct: 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC C K F T H + H G+ +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++C C KAF H HTG+ P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K F H R HTG+ P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P+ C CGK + H R HT P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 44.5 bits (106), Expect = 2e-06
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + C C K F H R HTG+RP +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 40.3 bits (95), Expect = 7e-05
Identities = 13/49 (26%), Positives = 16/49 (32%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P+KC C K F H R H +RP
Sbjct: 3 SGSSGTG------EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF + H + H G
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 32.2 bits (74), Expect = 0.041
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F H+R HT ++P
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 31.4 bits (72), Expect = 0.093
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F +++ +H R
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 61.0 bits (149), Expect = 3e-12
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE PY C C K FS+K L H R HTGE P S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 59.5 bits (145), Expect = 9e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+GE PY C CGK FS+K + H R HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P+ CN C K+F++K L H R HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P+ CN C K+F++K L H R HTG+ P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 4e-11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P+ C+ C K+F++K L+ H R HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P+ C+ C ++F++K L+ H R HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P+ C+ C KTF++K L H R HTGE P +
Sbjct: 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE+P+ C +CGK+F K L HQR+H E+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG------EKPSGP 43
Score = 49.5 bits (119), Expect = 3e-08
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY C+ C KTF++K L H R HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P+ C+ C KTF++K L+ H + H GE +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P+ C C K F++K H HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 6e-07
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+GE P+ C CGK +++K L+ H R+HT + P
Sbjct: 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 6e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+GE + CN C K F +K L H R+HTGE+P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 9e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S + + P+ C C K+F++K + H HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S +GE +P+ C+ C K F+ K L +H R+H E+P
Sbjct: 3 SGSSG---SGE---KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C+ CGK F ++ L +H + H G
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.036
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + + H+R HT KP
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K+F + + + H R HT
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HT 36
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 3e-12
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C KAFS+ L H R HTGE P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 59.8 bits (146), Expect = 6e-12
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PYKC CGK FS+ + H R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KCN C K+F++ L H R HTG+ P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC+ C K+F++ L H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KCN C K+F++ L H R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 54.8 bits (133), Expect = 4e-10
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+KC+ C ++F++ L H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P++C+ C K F++ L H R HTGE P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK+F L HQR H E+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F++ L H R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC+ C K F++ L H + H GE +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++C C KAF++ H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K+F++ H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P+ C CGK +++ LA H R HT + P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 2e-06
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + CN C K F + L H R HTGE+P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 4e-05
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P+KC+ C K F+ L H R H E+P
Sbjct: 3 SGSSGTG------EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF ++L H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.037
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F ++ H+R HT KP
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.33
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + + + +H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 60.8 bits (148), Expect = 3e-12
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 595 NHVRQHTGETPYQCQY--CPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE P+ C + C FSR D L H R H+G P S
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 59.6 bits (145), Expect = 9e-12
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 651 NHVRLHTGESPHKCHF--CSKSFTRKEHLNNHIRLHTGESPHKCD 693
+ TGE P C + C F+R + L+ H R H+G P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 58.5 bits (142), Expect = 2e-11
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 399 NHTRCHTGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE P+ C + CG FSR + + H R H+G P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 58.5 bits (142), Expect = 2e-11
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 539 NHVRQHTGESPHKCNY--CAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P C + C F+R + L H R H+G P +
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 57.3 bits (139), Expect = 5e-11
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 511 NHIMWHTGETPHRCDF--CSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P C + C F+R + L H R H+G P +
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 57.3 bits (139), Expect = 5e-11
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 623 NHVRQHTGESPHKCSY--CKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P C++ C F+R D L+ H R H+G P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 57.3 bits (139), Expect = 6e-11
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 567 NHVRQHTGDSPHKCNY--CAKSFTRKEHLVNHVRQHTGETPYQCQ 609
+ TG+ P C + C F+R + L H R H+G P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 54.6 bits (132), Expect = 5e-10
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 455 NHVMWHTGETPHVCQV--CGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P C CG +++R + L+ H RSH+ P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 51.5 bits (124), Expect = 5e-09
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 679 NHIRLHTGESPHKCDF--CLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P C + C F+R + L+ H + H+G +
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 49.2 bits (118), Expect = 4e-08
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 482 ANHMRSHTNDTPFKC--EICTKSFTRKEHFTNHIMWHTGETPHRCD 525
+ S T + PF C C F+R + + H H+G P
Sbjct: 1 GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 47.7 bits (114), Expect = 1e-07
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 427 NHVRKHTGETPHRC--EICKKAFTRKEHYVNHVMWHTGETPHVCQ 469
+ TGE P C C F+R + H H+G P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 47.3 bits (113), Expect = 2e-07
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 735 NHSRSHTGERPFACT--DCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCD 783
+ S TGE+PFACT CG F L H+RSH +P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG------VKPSGPS 46
Score = 47.3 bits (113), Expect = 2e-07
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 372 HTKRHSIDRPYCCSV--CMKTFARKEHLENHTRCHTGETPYKCQ 413
+ ++P+ C+ C F+R + L H R H+G P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 31.9 bits (73), Expect = 0.062
Identities = 15/70 (21%), Positives = 19/70 (27%), Gaps = 26/70 (37%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKR 375
T KPF C G C F+ + L RH +
Sbjct: 3 SGSSGTGEKPFACTWPG--------------------------CGWRFSRSDELSRHRRS 36
Query: 376 HSIDRPYCCS 385
HS +P S
Sbjct: 37 HSGVKPSGPS 46
Score = 31.5 bits (72), Expect = 0.070
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 797 SHLRSHLNERPHVC--PHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C P C F + +H R H+
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HS 38
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 3e-12
Identities = 20/42 (47%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TG PYQC C KAFS+ L H R HTGE P S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 59.5 bits (145), Expect = 8e-12
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TG PY+C CGK FS+ + H R HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 57.5 bits (140), Expect = 4e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TG P++CN C K+F++ L H R HTG+ P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 57.5 bits (140), Expect = 4e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG P++CN C K+F++ L H R HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 57.2 bits (139), Expect = 7e-11
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TG P++C+ C K+F++ L H R+HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 8e-10
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TG P++C+ C ++F++ L H R+HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 52.2 bits (126), Expect = 3e-09
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TG P++C+ C K F++ L H R HTGE P +
Sbjct: 7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TG +P+ C +CGK+F L HQR H E+P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG------EKPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +PY C+ C K F++ L H R HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TG P++C+ C K F++ L H + H GE +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TG P++C C KAF++ H HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TG P+ C CGK +++ LA H R HT + P
Sbjct: 7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T P++C C K+F++ H HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 4e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
G + CN C K F + L H R HTGE+P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S +P++C+ C K F+ L H R H E+P
Sbjct: 3 SGSSGTG------GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF ++L H + H G
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F ++ H+R HT KP
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S +P+ C C K+F + + + +H R
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR 33
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/43 (41%), Positives = 19/43 (44%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TG PY C C KAFS L H HTGE P S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TG PY C CGK FS + H HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 57.5 bits (140), Expect = 5e-11
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TG P+ CN C K+F+ L H HTG+ P +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 57.1 bits (139), Expect = 6e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TG P+ C+ C K+F+ L H +HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 57.1 bits (139), Expect = 7e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG P+ CN C K+F+ L H HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TG P+ C+ C ++F+ L H +HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 51.8 bits (125), Expect = 6e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TG P+ C+ C K F+ L H HTGE P +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TG +P+ C +CGK+F + +L HQ H E+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T P+ C C K+F+ T H + HTGE P
Sbjct: 1 GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +PY C+ C K F+ L H HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TG P+ C+ C K F+ LT H H GE +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TG P+ C C KAF+ H + HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TG P++C CGK ++ L H HT + P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+ G ++CN C K F L H HTGE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S +P+ C+ C K F+ L +H H E+P
Sbjct: 3 SGSSGTG------VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 5e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF + L +H H G
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.055
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + H+ HT KP
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S +P++C C K+F ++ + H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY C C KAF HL H+R HT E+ S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PY C CGK F H+ H+R HT ET
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 59.4 bits (145), Expect = 1e-11
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD 693
+ TGE P+ C+ C K+F HLN H+R+HT E+
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+ CN C K+F HL H+R HT ET
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+ CN C K+F HL H+R HT ++ +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 55.6 bits (135), Expect = 2e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ TGE P+ C+ C ++F HLN H+R+HT E+
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 51.7 bits (125), Expect = 6e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ TGE P+ C+ C K F HL H+R HT E+ +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD 525
+ S T + P+ C +C K+F H H+ HT ET
Sbjct: 1 GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCD 783
+ S TGE+P++C CGK+F L +L H R H + E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ------ETLSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P+ C VCGK + HL H+R HT +T
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 48.7 bits (117), Expect = 5e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+VC K F HL H R HT ET
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P+ C +C KAF H H+ HT ET
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+ C+ C K F HL HL+ H ET +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + CN+C K F+ HL H R HT E +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S GE +P+ C+VC K F HL HLR H E
Sbjct: 3 SGSSG---TGE---KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45
Score = 39.0 bits (92), Expect = 1e-04
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP++C+VCGKAF A L H + H ++
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 32.9 bits (76), Expect = 0.022
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C++CGK F + H R HT+
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 29.8 bits (68), Expect = 0.31
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+FV + +H+R
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR 33
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 4e-12
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K F++ HL NH R HTG P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PYKC CGK F++ H+ NH R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC+ C K FT+ HL NH R+HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KCN C K FT+ HL NH R HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KCN C K FT+ HL NH R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
TGE P+KC+ C + FT+ HL NH R+HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K FT+ HL NH R HTG P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + HL NH R HTG P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK F +L HQR H +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG------VKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC+ C K FT+ HL NH + H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C C K FT+ H NH HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK +T+ HLANH R HT P
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + P+KC C K FT+ H NH HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 43.7 bits (104), Expect = 3e-06
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + CN C K F + HL NH R HTG +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K FT HL +H R H +P
Sbjct: 3 SGSSGTG------EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGK F + L +H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 33.3 bits (77), Expect = 0.016
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C+ CGK F + H+R HT KP
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 28.6 bits (65), Expect = 0.76
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F +++ + H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR 33
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAF+ + +L H + HTGE P S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 1e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY+C CGK F+ + ++ H + HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C C K+FT + +L H ++HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 57.5 bits (140), Expect = 5e-11
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C C K+FT + +L H + HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
TGE P++C C K+FT + +L H + HTG+ P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 56.0 bits (136), Expect = 1e-10
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++C+ C ++FT + +L H ++HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 6e-09
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK+F + NL HQ+ H E+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG------EKPSGP 43
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TGE P+RC C K FT + +L H + HTGE P
Sbjct: 7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C C K+FT + + H HTGE P
Sbjct: 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + +L H + HTGE P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK +T + +L H + HT + P
Sbjct: 7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+RC C KAFT + + H HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
TGE P++C C K FT + +L H K H GE
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGE 38
Score = 43.3 bits (103), Expect = 5e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
GE + C C K F + +L H + HTGE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 6e-06
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C C K FT + +L +H + H E+P
Sbjct: 3 SGSSGTG------EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF ++ L +H K H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.049
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F R + H++ HT KP
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.12
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + + + H +
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK 33
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.6 bits (148), Expect = 4e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K+F++K L H + HTGE P S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PY+C CGK+F++K + H + HTGE P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C C KSFT+K L+ H ++HTGE P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 57.5 bits (140), Expect = 4e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C+ C KSFT+K L H + HTGE P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++C+ C KSFT+K L H + HTG+ P +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 55.6 bits (135), Expect = 2e-10
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++CS C +SFT+K L+ H ++HTGE P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K+FT+K L H + HTGE P +
Sbjct: 7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C+ CGKSF K L HQ+ H E+P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG------EKPSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY CS+C K+F +K L H + HTGE P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C IC KSFT+K H HTGE P
Sbjct: 1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C IC K+FT+K H HTGE P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++C C K+FT+K L H + H GE +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C+IC K F KK L H + HTGE+P +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C +CGK +T+K L H + HT + P
Sbjct: 7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C +C K FT K L H + H E+P
Sbjct: 3 SGSSGTG------EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C +CGK+F +++L H + H G
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C +CGK F + Q+ VH++ HT KP
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.20
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C KSF + + + H + HT
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HT 36
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 4e-12
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE P++C+ C K+FS L+ H R HTGE+P S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE P++C+ CGK+FS ++ H R HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ PH+C C KSF+ L+ H R HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 57.5 bits (140), Expect = 4e-11
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE PH+C C KSF+ L+ H R HTG++P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 57.5 bits (140), Expect = 5e-11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE PH+C C KSF+ L H R+HTGE+P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 54.5 bits (132), Expect = 6e-10
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE PH+C C +SF+ L H R+HTGE+P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 52.2 bits (126), Expect = 3e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE PH C C K+F+ L+ H R HTGE+P +
Sbjct: 7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P C +CGKSF L+ HQR H E P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG------ENPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C C K+F+ L H R HTGE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE PH C C K+F+ + H HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE PH+C C K+F+ L H + H GE +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE H C C K F L+ H R HTGE P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE PH C+ CGK ++ L H R HT + P
Sbjct: 7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + P +C C KSF+ H HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P +C C K F+ L+ H R H E P
Sbjct: 3 SGSSGTG------EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP C CGK+F F ++L+ H + H G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 34.4 bits (80), Expect = 0.006
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
H C CGK F + Q+IVH+R HT P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 31.4 bits (72), Expect = 0.083
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+PH C C KSF ++ +I H R
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 4e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE Y+C C KAF +K L H R H GE P S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE Y+C CGK F +K + H R H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 57.5 bits (140), Expect = 5e-11
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE ++C C K+F +K L+ H R+H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 57.1 bits (139), Expect = 6e-11
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ ++C+ C K+F +K L H R H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 57.1 bits (139), Expect = 7e-11
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE ++C+ C K+F +K L H R H G+ P +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 54.8 bits (133), Expect = 5e-10
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE ++CS C ++F +K L+ H R+H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE + C C K F +K L H R H GE P +
Sbjct: 7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGER + C++CGK+F K L HQR HR E+P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG------EKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +R Y CS C K F +K L H R H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE ++C C K F +K L+ H + H GE +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE + C C KAF +K H H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + ++C C K+F +K + H H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C+ C K F++K L H R H GE+P +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE + C CGK + +K L+ H R H + P
Sbjct: 7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S ER ++C C K F K L H R H E+P
Sbjct: 3 SGSSGTG------ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T + + C CGKAF ++ L H + H G
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.079
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + + +H+R H KP
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.093
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ER + C C K+F++ + + H R
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQR 33
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 4e-12
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAF + L H H+GE P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PYKC CGK F + + H H+GE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KCN C K+F + L H H+G+ P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 57.5 bits (140), Expect = 4e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KCN C K+F + L H H+GE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 57.2 bits (139), Expect = 7e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC+ C K+F + L H H+GE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+KC+ C ++F + L H H+GE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K F + L H H+GE P +
Sbjct: 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK+F + +L HQ +H E+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG------EKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + L H H+GE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC+ C K F + L H H+GE +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K+F + H H+GE P
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C C KAF + H H+GE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C CGK + + LA H +H+ + P
Sbjct: 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + CN C K F + L H +H+GE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S GE +P+KC+ C K F + L H +H E+P
Sbjct: 3 SGSSG---TGE---KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF ++ L H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.018
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F R + +H+ H+ KP
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.24
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K+F + + H H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HS 36
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 60.2 bits (147), Expect = 4e-12
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE P+ C C KAFS K +L+ H + H E P S
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 56.8 bits (138), Expect = 7e-11
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P C+ C K+F+ K +L+ H + H E P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 56.8 bits (138), Expect = 8e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+GE P+ C C K FS K +++ H + H E P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 56.8 bits (138), Expect = 9e-11
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P C+ C K+F+ K +L+ H + H + P +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 56.0 bits (136), Expect = 2e-10
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P C C K+F+ K +L H + H E P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 54.8 bits (133), Expect = 3e-10
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P C C K F+ K +LL H + H E P +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 54.5 bits (132), Expect = 6e-10
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P CS C+++F+ K +L H + H E P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 52.5 bits (127), Expect = 2e-09
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 737 SRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GE+PF C+ C K+F K LL HQ++H + E+P
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE------EKPSGP 41
Score = 49.1 bits (118), Expect = 5e-08
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 373 TKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ S ++P+ CS C K F+ K +L H + H E P
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 47.5 bits (114), Expect = 2e-07
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P C C K ++ K +L H ++H + P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 46.4 bits (111), Expect = 3e-07
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+GE C+ C K F K +L+ H ++H E+P +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 45.2 bits (108), Expect = 9e-07
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 432 HTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P C C+KAF+ K + + H H E P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 45.2 bits (108), Expect = 9e-07
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 684 HTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P C C K F+ K +L H + HA E +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 42.1 bits (100), Expect = 1e-05
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
E+PF C C K F+ K +L+ H ++H E+P
Sbjct: 8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 42.1 bits (100), Expect = 1e-05
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ + PF C C K+F+ K + H H E P
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C C K F + ++VH++ H E KP
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KPF C C KAF ++ L+ H + H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 25.6 bits (57), Expect = 9.9
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 800 RSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
E+P C C K+F + ++ H + H
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THA 34
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 5e-12
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TG+ PYKC CGK F++ H+ H HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 60.2 bits (147), Expect = 6e-12
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TG+ PY+C C K F++ HL H HTGE P S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TG+ P+KCN C K FT+ HL H HTG+ P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TG+ P+KC+ C K FT+ HL H +HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 4e-11
Identities = 18/41 (43%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG P+KCN C K FT+ HL H HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 54.4 bits (132), Expect = 5e-10
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TG+ P+KC+ C + FT+ HL H +HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TG+ P++C+ C K FT+ HL H HTGE P +
Sbjct: 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T P+KC C K FT+ H H HTGE P
Sbjct: 1 GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TG+ P+KC+ C K FT+ HL H H GE +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ +PY C+ C K F + HL H HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TG+ P++C C K FT+ H H HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TG++P+ C +CGK F +L H+ H E+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG------EKPSGP 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TG+ P+ C CGK +T+ HLA H HT + P
Sbjct: 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 8e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
G+ + CN C K F + HL H HTGE+P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S ++P+KC+ C K FT HL H H E+P
Sbjct: 3 SGSSGTG------KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T +KP+ C+ CGK F + L H H G
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.054
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + HR HT KP
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.57
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ++P+ C C K F +++ + +H
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG 33
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 5e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAF +L H HTGE P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 9e-12
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PYKC CGK F ++ H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC+ C K+F +L H +HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KCN C K+F +L H HTG+ P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 57.1 bits (139), Expect = 6e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KCN C K+F +L H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 54.8 bits (133), Expect = 4e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+KC+ C ++F +L H +HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K F +L H HTGE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 4e-08
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK+F NL HQ H E+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG------EKPSGP 43
Score = 49.0 bits (118), Expect = 5e-08
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K+F + T H + HTGE P
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC+ C K F +LT H H GE +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C C KAF + H + HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F +L H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 6e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK + +L H HT + P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K F +L +H H E+P
Sbjct: 3 SGSSGTG------EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF + L +H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.076
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + H+ HT KP
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F H+ + H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 60.3 bits (147), Expect = 5e-12
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY C+ C K+F L+ H R H+GE P S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 59.9 bits (146), Expect = 8e-12
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY C+ CGK+F ++ H R H+GE P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 57.2 bits (139), Expect = 5e-11
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+ C C KSF L H R+H+GE P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+ C C KSF L+ H R H+GE P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+ C C KSF L+ H R H+G+ P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 54.5 bits (132), Expect = 6e-10
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+ C C +SF L H R+H+GE P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 52.2 bits (126), Expect = 3e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K+F LL H R H+GE P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 49.9 bits (120), Expect = 2e-08
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGKSF LL HQR H E+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG------EKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K+F L H R H+GE P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C+ C K+F + H H+GE P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C+ CGK + L H R H+ + P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+ C+ C KSF H H+GE P
Sbjct: 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+ C C K+F L H + H+GE +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTD 750
GE + C C K F L+ H R H+GE+P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+ C C K F L+ H R H E+P
Sbjct: 3 SGSSGTG------EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 39.9 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGK+F + + L+ H + H G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.018
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + ++ H+R H+ KP
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 32.2 bits (74), Expect = 0.037
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C KSF +C++KH R H+
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HS 36
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 5e-12
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ TGE PY+C C K F +L H R HTGE P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 59.4 bits (145), Expect = 9e-12
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+ TGE PYKC CGK F ++ H R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ TGE P+KC+ C K F +L+ H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ TGE P+KCN C K F +L H R HTG+ P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 4e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ TG+ P+KCN C K F +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCH 665
+ TGE P+KC+ C + F +L+ H R+HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K F +L H R HTGE P +
Sbjct: 7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S TGE+P+ C +CGK F L HQR H G E+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH---TG---EKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F +L H R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+ TGE P+KC+ C K F +L+ H + H GE +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 483 NHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K F + + H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+ TGE P+ C CGK + +L+ H R HT + P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ TGE P++C C K F + H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 4e-06
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE + CN C K F +L H R HTGE+P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KC+ C K F +L H R H E+P
Sbjct: 3 SGSSGTG------EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGK F + L H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.047
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCH 329
C+ CGK F + + H+R HT KP
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.30
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F ++ + +H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 60.2 bits (147), Expect = 5e-12
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
+ +GE PY+C C KAF K L+ H R H G S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 59.1 bits (144), Expect = 1e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ +GE PY+C CGK F K ++ H R H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 56.8 bits (138), Expect = 7e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ +GE P++C+ C K+F K L H R H G S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 56.8 bits (138), Expect = 8e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+ +GE P++CN C K+F K L+ H R H G S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 55.2 bits (134), Expect = 2e-10
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ +G+ P++CN C K+F K L+ H R H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 54.1 bits (131), Expect = 6e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ +GE P++C+ C ++F K L H R H G S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 51.4 bits (124), Expect = 6e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
+ +GE P+ C+ C K F K L+ H R H G S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 50.2 bits (121), Expect = 2e-08
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
+ S +GE+P+ C +CGK+F K L+ H+R+H
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 47.5 bits (114), Expect = 1e-07
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + P++C C K+F K H H G +
Sbjct: 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ +GE P+ C C KAF K + H H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY C+ C K F K L H R H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
+ +GE P++C+ C K F K L H + HAG +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 44.1 bits (105), Expect = 2e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+ +GE + CN C K F+ K L+ H R+H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ +GE P+ C CGK + K L H R+H +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P++C+ C K F K L+ H R+H
Sbjct: 3 SGSSGSG------EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 37.9 bits (89), Expect = 3e-04
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP+ C+ CGKAF +++ L+ H + H G S +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 33.7 bits (78), Expect = 0.014
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F ++ +IVH R H +
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 31.3 bits (72), Expect = 0.086
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P+ C C K+F+ + +I H R H
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THA 36
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 6e-12
Identities = 19/42 (45%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY C+ C KAF L H R HTGE P S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY C+ CGK F + H R HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+ C C K+F L H R+HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+ C C K+F L H R HTG+ P +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 57.2 bits (139), Expect = 7e-11
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+ C C K+F L H R HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+ C C ++F L H R+HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C+ C K F L H R HTGE P +
Sbjct: 7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK+F L HQR H E+P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C C K F L+ H R HTGE P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ CE C KAF H HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+ C+ C K F L H + H GE +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + P+ CE C K+F H HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C+ CGK + L H R HT + P
Sbjct: 7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 8e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C C K F+ L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+ C+ C K F L H R H E+P
Sbjct: 3 SGSSGTG------EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C CGKAF ++L H + H G
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.024
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + Q+ H+R HT KP
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F+ + + +H R
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.9 bits (146), Expect = 6e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAFS + L H HTG+ P S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY+C CGK FS + + H HTG+ P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 57.5 bits (140), Expect = 5e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++CN C K+F+ + L H HTG P +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 57.5 bits (140), Expect = 5e-11
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++CN C K+F+ + L H HTG+ P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 56.8 bits (138), Expect = 8e-11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C+ C K+F+ + L H +HTG+ P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 53.7 bits (130), Expect = 1e-09
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++C+ C ++F+ + L H +HTG+ P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C+ C K F+ + L H HTG+ P +
Sbjct: 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C CGK+F ++ +L HQ H ++P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG------KKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F+ + L H HTG+ P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++C+ C K F+ + LT H H G+ +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C C K+F+ + T H HTG+ P
Sbjct: 1 GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C C KAF+ + H HTG+ P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 45.2 bits (108), Expect = 9e-07
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK ++ + L H HT P
Sbjct: 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + CN C K F + L H HTG++P +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C+ C K F+ + L +H H ++P
Sbjct: 3 SGSSGTG------EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGKAF ++ L +H H G
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 32.1 bits (74), Expect = 0.038
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F R + H+ HT +KP
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 29.4 bits (67), Expect = 0.41
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + + H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 7e-12
Identities = 19/42 (45%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE P+ C C KAFS L H R HTGE P S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P C C K+F+ LN H R+HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE P+ C CGK FS + H R HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 56.0 bits (136), Expect = 2e-10
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P C C K+F+ L H R HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 54.8 bits (133), Expect = 5e-10
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P C C K+F+ L H R HTG+ P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 6e-10
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P C C ++F+ LN H R+HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+PF C DCGK+F L H+R H E+P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG------EKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P C C K F+ L H R HTGE P +
Sbjct: 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C C K F+ L H R HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + PF C C K+F+ H HTGE P
Sbjct: 1 GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 15/41 (36%), Positives = 16/41 (39%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P C C KAF+ H HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P C CGK ++ L H R HT + P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P C C K F+ L H + H GE +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE C C K F L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 2e-05
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+PF C C K F+ L H R H E+P
Sbjct: 3 SGSSGTG------EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KPF C CGKAF L H + H G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.063
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F + HRR HT KP
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.069
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C K+F +H + +H R HT
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HT 36
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 7e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K F++ HL H R HTG P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 59.8 bits (146), Expect = 7e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PYKC CGK F++ H+ H R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KCN C K FT+ HL H R HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC+ C K FT+ HL H R+HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KCN C K FT+ HL H R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 54.4 bits (132), Expect = 5e-10
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+KC+ C + FT+ HL H R+HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K FT+ HL H R HTG P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + HL H R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC+ C K FT+ HL H + H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK F +L H+R H +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG------GKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K FT+ H H HTG P
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C C K FT+ H H HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK +T+ HLA H R HT P
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + CN C K F + HL H R HTG +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P+KC+ C K FT HL H R H +P
Sbjct: 3 SGSSGTG------EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGK F + L H + H GG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 32.5 bits (75), Expect = 0.030
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + HRR HT KP
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 28.6 bits (65), Expect = 0.74
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F +++ + +H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR 33
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 7e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K F++ HL H HTGE P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 59.8 bits (146), Expect = 7e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PYKC CGK F++ H+ H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 3e-11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC+ C K FT+ HL H +HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KCN C K FT+ HL H HTG+ P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 4e-11
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P+KCN C K FT+ HL H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 54.4 bits (132), Expect = 5e-10
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+KC+ C + FT+ HL H +HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++C+ C K FT+ HL H HTGE P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KC+ C K FT+ HL H H GE +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C+ C K F + HL H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC C K FT+ H H HTGE P
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C +CGK F +L H+ H E+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG------EKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P++C C K FT+ H H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C CGK +T+ HLA H HT + P
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 6e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + CN C K F + HL H HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 4e-05
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P+KC+ C K FT HL H H E+P
Sbjct: 3 SGSSGTG------EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C+ CGK F + L H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.040
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + HR HT KP
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.43
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K F +++ + +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG 33
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 7e-12
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAFS L H R H+GE P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY+C C K FS + H R H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C+ C K+F+ L H R H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C C K+F+ L H R+H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++C+ C K+F+ L H R H+G+ P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++C C+++F+ L H R+H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 51.4 bits (124), Expect = 6e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ CD C K F+ L H R H+GE P +
Sbjct: 7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C C K+F +L HQR H E+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG------EKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY C VC K F+ L H R H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++CD C K F+ LT H + H+GE +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C++C K+F+ T H H+GE P
Sbjct: 1 GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C++C+KAF+ H H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C VC K ++ L H R H+ + P
Sbjct: 7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C++C K F L H R H+GE+P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++CDVC K F+ L H R H E+P
Sbjct: 3 SGSSGTG------EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C VC KAF A L H + H G
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.014
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
CD+C K F + + H+R H+ KP
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.077
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F H + +H R
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.4 bits (145), Expect = 8e-12
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
G+ ++C C K F++ L H R HTGE P S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
G+ +KC C K F++ + H R HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
G+ KCN C K+FT+ L H R HTG+ P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
G+ KC+ C K+FT+ L H R+HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
G KCN C K+FT+ L H R HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
G+ KC+ CK++FT+ L H R+HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
G+ +C+ C KTFT+ L H R HTGE P +
Sbjct: 7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S G++ F C +C K+F +L HQR H E+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ + + C+ C KTF + L H R HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S FKC C K+FT+ T H HTGE P
Sbjct: 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
G+ KC+ C KTFT+ LT H + H GE +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
G+ +C CKK FT+ H HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
G+ C C K +T+ L H R HT + P
Sbjct: 7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
AG+ CN C K F + L H R HTGE+P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S ++ FKC+ C K FT L H R H E+P
Sbjct: 3 SGSSGAG------KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+K F C+ C K F + L H + H G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.030
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ C K F + VH+R HT KP
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.68
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ++ C C K+F + + + H R
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.4 bits (145), Expect = 9e-12
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C KAFS + L H R H+G+ P S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
TGE PY+C CGK FS ++ + H R H+G+ P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 56.8 bits (138), Expect = 9e-11
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P++C+ C K+F+ ++ L H R H+G+ P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P++C C K+F+ ++ L+ H R+H+G+ P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P++C+ C K+F+ ++ L H R H+G P +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 54.1 bits (131), Expect = 8e-10
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P++CS C ++F+ + L+ H R+H+G+ P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 51.4 bits (124), Expect = 6e-09
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P+ C C K F+ ++ L H R H+G+ P +
Sbjct: 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C+ CGK+F + +L HQR H ++P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG------KKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++PY CSVC K F+ ++ L H R H+G+ P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P++C C K F+ ++ L+ H + H+G+ +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P++C +C K+F+ ++ + H H+G+ P
Sbjct: 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P+ C +C KAF+ ++ H H+G+ P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
TGE P+ C VCGK ++ ++ L+ H R H+ P
Sbjct: 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C++C K F ++ L H R H+G++P +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S E+P++C VC K F+ + L H R H ++P
Sbjct: 3 SGSSGTG------EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45
Score = 37.5 bits (88), Expect = 6e-04
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 315 VHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C VCGKAF + L H + H G
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 33.6 bits (78), Expect = 0.014
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C +CGK F +R + VH+R H+ +KP
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 29.8 bits (68), Expect = 0.33
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C K+F + H R
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.5 bits (145), Expect = 9e-12
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE PY+C C K+F L H R HTGE P S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 59.5 bits (145), Expect = 1e-11
Identities = 17/41 (41%), Positives = 19/41 (46%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE PYKC C K+F + H R HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 58.7 bits (143), Expect = 2e-11
Identities = 18/41 (43%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P+KC C KSF L H R+HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 58.3 bits (142), Expect = 2e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P+KC+ C KSF L H R HTG+ P +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 57.9 bits (141), Expect = 4e-11
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQ 609
TG+ P+KC+ C KSF L H R HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 55.2 bits (134), Expect = 3e-10
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P+KC C +SF L H R+HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 53.3 bits (129), Expect = 2e-09
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P++CD C K+F L H R HTGE P +
Sbjct: 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P+ C C KSF +L HQR H E+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG------EKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQ 413
+ ++PY C VC K+F L H R HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T + P+KC++C KSF T H HTGE P
Sbjct: 1 GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 2e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P+KCD C K+F LT H + H GE +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQ 469
TGE P++C++C K+F H HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P+ C VC K + L H R HT + P
Sbjct: 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P+KCDVC K F L H R H E+P
Sbjct: 3 SGSSGTG------EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP+ C VC K+F + + L H + H G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
CD+C K F Y + VH+R HT KP
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.28
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C KSF + + H R
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 59.1 bits (144), Expect = 1e-11
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQ-HTGESPHKCS 637
+ TG+ PY+C C KAF + L+ H R HTGE P S
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRK-HTGETPHRC 440
+ TG+ PY+C CGK F + ++ H R HTGE P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 56.0 bits (136), Expect = 2e-10
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQ-HTGETPYQC 608
+ TG P++C C K+F + L+ H R HTGE P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 55.7 bits (135), Expect = 2e-10
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQ-HTGDSPHKCN 581
+ TG+ P++C C K+F + L+ H R HTG+ P +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 53.7 bits (130), Expect = 9e-10
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRL-HTGESPHKC 692
+ TG+ P++C C K+F + L H R HTGE P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 51.0 bits (123), Expect = 8e-09
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRL-HTGESPHKC 664
+ TG+ P++C C ++F + L H R HTGE P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 49.9 bits (120), Expect = 3e-08
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQ-HTGESPHKCN 553
+ TG+ P+ C C K F + L+ H R HTGE P +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRS-HRKQNGEVLERPFKC 782
+ S TG++P+ C +CGK+F +L+ H R H E+P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG------EKPSGP 44
Score = 44.9 bits (107), Expect = 2e-06
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHI-MWHTGETPHRC 524
+ S T P++C C K+F + H +HTGE P
Sbjct: 1 GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 44.5 bits (106), Expect = 2e-06
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHV-MWHTGETPHVC 468
+ TG+ P+ C C KAF + + H +HTGE P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 44.5 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRC-HTGETPYKC 412
+ +PY C C K F + L H R HTGE P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQ-HAGETEHVCN 721
+ TG+ P++C C K F + L H + H GE +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 42.6 bits (101), Expect = 9e-06
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRS-HTNDTPFKC 496
+ TG+ P+ C CGK + + L H R HT + P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 41.8 bits (99), Expect = 1e-05
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRS-HTGERPFACT 749
+ G+ + C C K F++ L+ H R HTGE+P +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRS-HLNERPHVCP 811
S ++P++C C K F L+ H R H E+P
Sbjct: 3 SGSSGTG------KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S ++P+ C C K+F+++T +I+H R HT
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37
Score = 34.5 bits (80), Expect = 0.007
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKC-HLGGSMYTC 356
T +KP+ C CGKAF L+ H + H G
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 29.8 bits (68), Expect = 0.28
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 300 CDLCGKFFPYRYQMIVH-RRYHTERKPFTC 328
C CGK F +I H R YHT KP
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 59.1 bits (144), Expect = 1e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE P++C C K F R+ HL H+R H+ E S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 59.1 bits (144), Expect = 1e-11
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+GE P+KC CGK F R+ H+ H+R H+ E
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P KC+ C K F R+ HL H+RLH+ E
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 57.9 bits (141), Expect = 3e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE P KCN C K F R+ HL H+R H+ + +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 57.2 bits (139), Expect = 5e-11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P KCN C K F R+ HL H+R H+ E
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P KC+ C + F R+ HL H+RLH+ E
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 54.1 bits (131), Expect = 8e-10
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE P +C+ C K F R+ HL H+R H+ E +
Sbjct: 7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 51.0 bits (123), Expect = 8e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S +RP+ C+ C K F R+ HL H R H+ E
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 49.8 bits (120), Expect = 3e-08
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +GERPF C +CGK F + +L H R H + E+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR------EKSSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+GE P KC+ C K F R+ HL HL+ H+ E +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P C CGK + R+ HLA H+R H+ +
Sbjct: 7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 46.4 bits (111), Expect = 3e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + + PFKC C K F R+ H H+ H+ E
Sbjct: 1 GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P +C C K F R+ H H+ H+ E
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+GE CN C K F ++ HL H R H+ E+ +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 41.8 bits (99), Expect = 1e-05
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S ERPFKC+ C K F + HL HLR H E+
Sbjct: 3 SGSSGSG------ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ +PF C+ CGK F ++ L H + H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 33.3 bits (77), Expect = 0.015
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F R + H R H+ K
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 29.4 bits (67), Expect = 0.42
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ERP C C K F + + H+R
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR 33
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.1 bits (144), Expect = 1e-11
Identities = 17/42 (40%), Positives = 18/42 (42%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
GE PYQC C K+FS L H HT E P S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 57.2 bits (139), Expect = 6e-11
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
GE PY+C CGK+FS + H HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
GE P++C C KSF+ L H HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 55.6 bits (135), Expect = 2e-10
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
G+ P++C+ C KSF+ L H HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
GE P++C+ C KSF+ L H HT + P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 54.5 bits (132), Expect = 5e-10
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
GE P++CS C +SF+ L H HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 51.8 bits (125), Expect = 6e-09
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
GE P++C C K+F+ L H HT E P +
Sbjct: 7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 48.3 bits (116), Expect = 7e-08
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S GE+P+ C++CGKSF L H +H + E+P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR------EKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
++PY CS C K+F+ L H HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + P++C C KSF+ T H + HT E P
Sbjct: 1 GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
GE P++C C K+F+ H + HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
GE P+ C CGK ++ L H +HT + P
Sbjct: 7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
GE P++C C K+F+ LT H H E +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 42.9 bits (102), Expect = 6e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE + C+ C K F L H +HT E+P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P++C C K F+ L H +H E+P
Sbjct: 3 SGSSGEG------EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 12/41 (29%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
KP+ C CGK+F L H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 33.3 bits (77), Expect = 0.016
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F Y++ H HT KP
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+P+ C C KSF + +H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.1 bits (144), Expect = 1e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+G+ PY+C+ C K F + HL H R HTGE S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 57.9 bits (141), Expect = 3e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+G+ PY+C+ C K F + H+ H R HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 57.2 bits (139), Expect = 7e-11
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+G+ P++C C K+F + HLN H R+HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G P++C C K+F + HL H R HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+G+ P++C C K+F + HL H R HTG+ +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 55.2 bits (134), Expect = 3e-10
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+G+ P++C C+++F + HLN H R+HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+G+ P+ C C KTF + HL H R HTGE +
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S +PY C C KTF + HL H R HTGE
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S +G++P+ C +C K+F G+L H+R H ER
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG------ERSSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+G+ P+ C+ C+K F + H H HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+G+ P+ C+ C K + + HL H R HT +
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
+G+ P++C C KTF + HL H + H GE +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + P++C+ C K+F + H H HTGE
Sbjct: 1 GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 43.7 bits (104), Expect = 3e-06
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+G+ + C C K F++ HL H R HTGER
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S ++P++C C K F GHL H R H ER
Sbjct: 3 SGSSGSG------KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ +KP+ C C K F L H + H G
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 32.9 bits (76), Expect = 0.026
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C C K F + H+R HT +
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ++P+ C C K+F++ + +H R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR 33
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 59.1 bits (144), Expect = 1e-11
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE P +C C KAF K L+ H R H + S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 57.2 bits (139), Expect = 6e-11
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
TGE P KC C K+F K L+ H R H D +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 57.2 bits (139), Expect = 6e-11
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE P KC CGK F K ++ H R H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 56.8 bits (138), Expect = 9e-11
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P KC C K+F K L+ H R H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 55.3 bits (134), Expect = 3e-10
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
TGE P KC C K+F K L H R H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P KC+ C ++F K L H R H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 53.3 bits (129), Expect = 1e-09
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S TGE+P CT+CGK+F K L+ HQR+H ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD------DKHSGP 43
Score = 52.6 bits (127), Expect = 3e-09
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
TGE P +C C K F K L+ H R H + +
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P C+ C K F K L H R H +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P C CGK + K L H R+H +D
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P +C C KAF K + H H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE C C K F K L+ H R+H ++ +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
TGE P KC C K F K L H + H + +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 44.9 bits (107), Expect = 1e-06
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S T + P KC C K+F K H H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+P KC C K F K L+ H R+H++++
Sbjct: 3 SGSSGTG------EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
T KP C CGKAF ++++L+ H + H+
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.8 bits (81), Expect = 0.004
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CGK F ++ Q+I+H+R H + K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.8 bits (73), Expect = 0.068
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C K+F + +I H R H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THV 36
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 58.7 bits (143), Expect = 1e-11
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
G PY+C C K+FS K L+ H R HT E P S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 58.3 bits (142), Expect = 2e-11
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
G PYKC C K+FS K ++ H R HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 57.5 bits (140), Expect = 5e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
G +P+KC+ C KSF+ K L+ H R HT + P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 57.2 bits (139), Expect = 6e-11
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
G +P+KC C KSF+ K L H R+HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
G +P+KC+ C KSF+ K L+ H R HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
G +P+KCS C++SF+ K L H R+HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
G P++C C K+F+ K LL H R HT E P +
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S G P+ C+ C KSF K LL HQR H + E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR------EKPSGP 43
Score = 50.6 bits (122), Expect = 1e-08
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ PY CS C K+F+ K L H R HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S P+KC C KSF+ K H HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 45.6 bits (109), Expect = 6e-07
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
G P+ C C K ++ K L H R HT + P
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 45.2 bits (108), Expect = 9e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
G +P+KC C K+F+ K L H + H E +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
G P++C C+K+F+ K + H HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
AG + C+ C K F K L+ H R HT E+P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S P+KC C K F+ K L+ H R H E+P
Sbjct: 3 SGSSGAG------VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 35.2 bits (82), Expect = 0.003
Identities = 8/41 (19%), Positives = 13/41 (31%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
P+ C C K+F + L+ H + H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 34.1 bits (79), Expect = 0.008
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C C K F + +++VH+R HT KP
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S P+ C C KSF ++ H R HT
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HT 36
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 59.3 bits (143), Expect = 2e-11
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 606 YQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGE 659
Y C+ C + L H+R HT P+ C+YC SF K +L H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 58.2 bits (140), Expect = 4e-11
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 578 HKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGE 631
+ C C + L H+R HT PY C YC +F K +L H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 58.2 bits (140), Expect = 4e-11
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 382 YCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
Y C C + L+ H R HT PY C YC +F K ++ H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 57.0 bits (137), Expect = 9e-11
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 550 HKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGE 603
+ C C + L H+R HT P+ C YC SF K +L H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 56.6 bits (136), Expect = 1e-10
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 410 YKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGE 463
Y C+ CG + + H+R HT P+ C C +F K + H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 55.9 bits (134), Expect = 2e-10
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 662 HKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
+ C C + L HIR HT P+ C +C +F K +LT H+K A
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 55.1 bits (132), Expect = 4e-10
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 494 FKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGE 547
+ CE C + HI HT P+ C +C+ +F K +L H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 55.1 bits (132), Expect = 4e-10
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 466 HVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
++C+ CG + + L H+R+HT+ P+ C C SF K + T H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 55.1 bits (132), Expect = 5e-10
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 634 HKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGE 687
+ C C + L H+R HT P+ C +C+ SF K +L H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 54.3 bits (130), Expect = 8e-10
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 522 HRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
+ C+ C + L H+R HT P+ C YC SF K +L H++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 51.3 bits (122), Expect = 1e-08
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 718 HVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
++C C K L H R+HT RP+ CT C SF KGNL H +S
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 48.9 bits (116), Expect = 7e-08
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 438 HRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTND 491
+ CE C + H+ HT P+ C C + K +L HM+S +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 46.2 bits (109), Expect = 7e-07
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 690 HKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGER 744
+ C+ C + L H++ H + C C+ F K +L H +S +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 45.5 bits (107), Expect = 1e-06
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 748 CTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNER 806
C +CG L H R+H RP+ C C F KG+L H++S + +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTD------VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 44.3 bits (104), Expect = 3e-06
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 354 YTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGE 407
Y C C L++H + H+ RPY C+ C +F K +L H +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 42.0 bits (98), Expect = 2e-05
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 780 FKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKN 830
+ C+ C L H+R+H + RP+ C +C+ SF + KH++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 40.5 bits (94), Expect = 8e-05
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
+ C+ CG + H R HT+ +P+ C C +F + L H K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 37.0 bits (85), Expect = 0.001
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 326 FTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHS 377
+ C CG + L H + H Y C C F + +L +H K +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
GE ++C+ C FS+ L H H GE P S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 57.2 bits (139), Expect = 5e-11
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
GE +KC+ C FS+ + H H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
GE KC C F++ L H +H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 56.4 bits (137), Expect = 1e-10
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
GE KC C F++ L H H G+ P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 56.0 bits (136), Expect = 1e-10
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
G+ KC C F++ L H H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 56.0 bits (136), Expect = 1e-10
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
GE KC C F++ L H +H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 51.4 bits (124), Expect = 6e-09
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
GE +C C F++ L H H GE P +
Sbjct: 7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 51.0 bits (123), Expect = 8e-09
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
S GE+ + C +C F +L HQ H E+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG------EKPSGP 43
Score = 49.1 bits (118), Expect = 5e-08
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
++ + C C F++ L H H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 45.2 bits (108), Expect = 9e-07
Identities = 8/37 (21%), Positives = 13/37 (35%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
GE C+ C +++ L H H + P
Sbjct: 7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
S + +KC C F++ H H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 10/41 (24%), Positives = 13/41 (31%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
GE +C C F++ H H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 44.1 bits (105), Expect = 2e-06
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCN 721
GE KC C F++ L H H GE +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
GE C C F + L H H GE+P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+ +KC C F+ L H H+ E+P
Sbjct: 3 SGSSGMG------EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 8/41 (19%), Positives = 11/41 (26%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
K + C C F + L H H+G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.066
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C C F + +H+ H KP
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S + E+ C C F + + + H
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 58.3 bits (142), Expect = 3e-11
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPH 438
+ GE PY C+ CG F + + +H+R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 54.8 bits (133), Expect = 4e-10
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPH 690
GE P+ C C F + L +H+R+HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 54.4 bits (132), Expect = 5e-10
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
GE PY C+ C F L +H+R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 52.1 bits (126), Expect = 3e-09
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPY 606
G+ P+ C C F + L +H+R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 52.1 bits (126), Expect = 4e-09
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPH 662
GE P+ C C F L +H+R+HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 50.2 bits (121), Expect = 1e-08
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPH 578
GE P+ C C F + L +H+R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S S GE+P+ C CG F L H R H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 48.6 bits (117), Expect = 6e-08
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
GE P+ C+ C F + L +H+R HTG P
Sbjct: 6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPH 522
S + P+ CEIC F + +H+ HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 46.3 bits (111), Expect = 3e-07
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPH 466
GE P+ CEIC F + +H+ HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 46.0 bits (110), Expect = 5e-07
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY 410
+ ++PY C +C F + L++H R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPF 494
GE P+ C++CG ++ + L +H+R HT P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 41.7 bits (99), Expect = 1e-05
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
GE P+ C+ C F + L +HL+ H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGS 37
Score = 41.3 bits (98), Expect = 2e-05
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFA 747
GE + C IC F + L +H R HTG P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPH 808
E+P+ C++C F L SHLR H P
Sbjct: 9 EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 34.4 bits (80), Expect = 0.007
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
KP+ C +CG F L SH + H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 32.1 bits (74), Expect = 0.043
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S E+P+ C C F + H+R HT
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHT 35
Score = 30.2 bits (69), Expect = 0.22
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFT 327
+ C++CG F + + H R HT P +
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 57.9 bits (141), Expect = 3e-11
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPH 438
+ GE PYKC+ CG F + H+ HV HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 56.0 bits (136), Expect = 1e-10
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPH 690
GE P+KC C F + HL H+ +HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
GE PY+C+ C F + HL HV HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 55.2 bits (134), Expect = 3e-10
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPY 606
G+ P+KC C F + HL HV HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPH 662
GE P+KC C F + HL HV +HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 52.1 bits (126), Expect = 3e-09
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPH 578
GE P+KC C F + HL HV HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
GE P++C+ C F + HL HV HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 48.3 bits (116), Expect = 7e-08
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPH 522
S + P+KCE C F + H H++ HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 47.9 bits (115), Expect = 9e-08
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S S GE+P+ C CG F +L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPH 466
GE P++CE C F + H HV+ HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 46.0 bits (110), Expect = 5e-07
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY 410
+ ++PY C C F + HL H HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 45.2 bits (108), Expect = 8e-07
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPF 494
GE P+ C+ CG ++ + HL H+ HT P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 45.2 bits (108), Expect = 8e-07
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
GE P+KC+ C F + HL H+ H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS 37
Score = 42.1 bits (100), Expect = 1e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFA 747
GE + C C F++ HL H HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPH 808
S E+P+KC+ C F HL +H+ H P
Sbjct: 2 SSGSSGG------EKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 33.7 bits (78), Expect = 0.012
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
KP+ C CG F A L +H H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 30.6 bits (70), Expect = 0.13
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 798 HLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S E+P+ C C FV+ + H+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32
Score = 28.3 bits (64), Expect = 0.97
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 6/39 (15%)
Query: 295 MGNHT------CDLCGKFFPYRYQMIVHRRYHTERKPFT 327
G+ C+ CG F + H HT P +
Sbjct: 3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 57.9 bits (141), Expect = 3e-11
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ GE ++C C K F + + + H R HTGE P S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 56.8 bits (138), Expect = 9e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ GE ++C CGK F + + + H R HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ G+ H+C+ C K F + + + H R HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 54.9 bits (133), Expect = 4e-10
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ GE H+C C K F + + H R+HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 54.5 bits (132), Expect = 6e-10
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+ GE H+C+ C K F + + + H R HTG+ P +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ GE H+CS C + F + + H R+HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 8e-09
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKC 782
+ S GER C+DCGK F N + H+R H E+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG------EKPSGP 43
Score = 49.5 bits (119), Expect = 3e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 511 NHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+ GE HRC C K F + + + H R HTGE P +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ GE HRC C K F + +++ H HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ GE H C+ C K FL+ + + H R HTGE+P +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+R + CS C K F + + H R HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S + +C C K F + +F H HTGE P
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ GE H C CGK + + + H R HT + P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 3e-06
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
+ GE H+C C K F + + H + H GE
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGE 38
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S ER +C C K F + + H R H E+P
Sbjct: 3 SGSSGHG------ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
+ C CGK F + + H + H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 34.0 bits (79), Expect = 0.010
Identities = 15/31 (48%), Positives = 15/31 (48%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
H C CGKFF I HRR HT KP
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.043
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S ER H C C K F++ + I+H R
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.6 bits (140), Expect = 5e-11
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
TGE P+QC+ C FS L H+R H P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 56.1 bits (136), Expect = 1e-10
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
TGE P++C+ CG NFS + H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 53.0 bits (128), Expect = 2e-09
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD 693
TGE P +C C +F+ L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 52.2 bits (126), Expect = 3e-09
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
TG+ P +C C +F+ L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 51.8 bits (125), Expect = 5e-09
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
TGE P +C C +F+ L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 50.7 bits (122), Expect = 1e-08
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCD 783
S TGE+PF C +CG +F +L H RSH + P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER------TDPSGPS 44
Score = 50.7 bits (122), Expect = 1e-08
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
TGE P +C C +F+ L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 49.5 bits (119), Expect = 3e-08
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
TGE P +C C F+ L H+R H P
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
TGE P C+ CG ++ L H+RSH P
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
TGE P +C+ C F+ H+ H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD 525
S T + PF+C+ C +F+ H+ H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 43.0 bits (102), Expect = 7e-06
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ ++P+ C C F+ L H R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 41.8 bits (99), Expect = 1e-05
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
TGE P +C C F+ L HL+ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT 38
Score = 41.8 bits (99), Expect = 1e-05
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPH 812
S GE +PF+C C +F+ L HLRSH P
Sbjct: 3 SGSSG---TGE---KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 41.0 bits (97), Expect = 3e-05
Identities = 11/41 (26%), Positives = 11/41 (26%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
GE C C F L H RSH P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S E+P C C +F + KH+R +H
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHE 36
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
T KPF C CG F + L H + H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 31.0 bits (71), Expect = 0.13
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C CG F + + H R H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 57.2 bits (139), Expect = 6e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+ + H+CH C + FT K HLN H R+HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 57.2 bits (139), Expect = 6e-11
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ + +QC C + F+ K HL H R HTGE P S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 55.6 bits (135), Expect = 2e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ + ++C CG+ F+ K H+ H R HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+ + H+C+ C + FT K HL H R HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 54.9 bits (133), Expect = 4e-10
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+ + H+C C + FT K HLN H R+HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 6e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+ + H+C+ C + FT K HL H R HTG+ P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
+ H+C C + FT K HL H R HTGE P
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
+ S + + C +CG+ F LK +L HQR H
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+ + H+C C + FT K H H HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 3e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+ H C CG+ +T K HL H R HT + P
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S + + C C + F K HL H R HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 6e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S ++ +C C + FT K H H HTGE P
Sbjct: 1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+ + H C+ C + F K HL H R HTGE+P +
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
+ + H+C C + FT K HL H + H GE
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGE 38
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S + +C C + FT K HL H R H E+P
Sbjct: 3 SGSSGSS------TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
+ K CH CG+ F ++ L H + H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.051
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
H C CG+ F + + H+R HT KP
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S + + H C C + F + + +H R
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 56.8 bits (138), Expect = 7e-11
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPH 438
+ GE PY+C CGK FS+K ++ H+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 55.7 bits (135), Expect = 2e-10
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
GE PY+C C KAFS+K L+ H+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 54.5 bits (132), Expect = 5e-10
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPH 690
GE P++C C K+F++K L HIR+HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 54.5 bits (132), Expect = 5e-10
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPY 606
G+ P++C+ C K+F++K L+ H+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 52.2 bits (126), Expect = 3e-09
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPH 578
GE P++C+ C K+F++K L+ H+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPH 662
GE P++C C ++F++K L H+R+HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S S GE+P+ C CGK+F KG+L+ H R H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 47.9 bits (115), Expect = 9e-08
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
GE P+RCD C K F++K L+ H+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 45.3 bits (108), Expect = 9e-07
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
GE P++CD C K F++K L H++ H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS 37
Score = 45.3 bits (108), Expect = 1e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPH 466
GE P+RC+ C KAF++K + H+ HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 43.7 bits (104), Expect = 3e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPH 522
S + P++C+ C K+F++K HI HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 42.9 bits (102), Expect = 5e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY 410
+ ++PY C C K F++K L H R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 42.6 bits (101), Expect = 7e-06
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFA 747
GE + C+ C K F +K L+ H R HTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 42.6 bits (101), Expect = 8e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPF 494
GE P+ C CGK +++K L H+R HT P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 40.2 bits (95), Expect = 6e-05
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPH 808
S E+P++CD C K F+ KG L+ H+R H P
Sbjct: 2 SSGSSGG------EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
KP+ C CGKAF + L+ H + H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 32.5 bits (75), Expect = 0.034
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFT 327
+ CD CGK F + +IVH R HT P +
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 31.4 bits (72), Expect = 0.075
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 798 HLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S E+P+ C C K+F + +I HIR HT
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HT 35
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 54.1 bits (131), Expect = 6e-10
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
T Y C CGK F+R H+ H + HT ++
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 54.1 bits (131), Expect = 7e-10
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
T Y C C KAF+R HL H + HT +S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 52.6 bits (127), Expect = 2e-09
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
T + CN C K+FTR HL H + HT ++
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 51.8 bits (125), Expect = 5e-09
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
T + C+ C K+FTR HL H ++HT +S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 51.0 bits (123), Expect = 9e-09
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
T + CN C K+FTR HL H + HT S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 49.9 bits (120), Expect = 2e-08
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
T + C+ C ++FTR HL H ++HT +S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGET 716
T + C+ C K FTR HLT H K H ++
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKS 39
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
T + C+ C K FTR HL H + HT +S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 45.6 bits (109), Expect = 6e-07
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNG 773
S T + + C +CGK+F +L HQ+ H +++G
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG 40
Score = 44.9 bits (107), Expect = 1e-06
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ S T+ + C C K+FTR H T H HT ++
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 43.7 bits (104), Expect = 3e-06
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
T + C C KAFTR H H HT ++
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.8 bits (99), Expect = 1e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
T + C CGK +TR HL H + HT +
Sbjct: 7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
+ + Y C+ C K F R HL H + HT ++
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+ CN C K F + HL H + HT + +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCA 357
T+ K + C+ CGKAF L H K H S +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44
Score = 34.9 bits (81), Expect = 0.004
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S + + C+ C K FT HL H + H +
Sbjct: 3 SGSSGTD------SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 28.7 bits (65), Expect = 0.62
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S S + + + C C K+F + +H +K HT
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIHT 36
Score = 26.0 bits (58), Expect = 7.0
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
C+ CGK F + + H++ HT + +
Sbjct: 15 CNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 53.5 bits (129), Expect = 1e-09
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 401 TRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRC 440
+ +GE PY C C + FS +V H + HT ++
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 51.9 bits (125), Expect = 4e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKC 636
+GE PY C C + FS + LV H + HT +S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 48.9 bits (117), Expect = 4e-08
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ P+ C C ++F+ LV H + HT ++
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 48.9 bits (117), Expect = 5e-08
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKC 692
+GE P+ C C ++F+ L H ++HT +S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 48.5 bits (116), Expect = 7e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKC 580
+GE P+ C C ++F+ LV H + HT S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 48.1 bits (115), Expect = 9e-08
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE P+ C+ CK++F+ + L H ++HT +S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 47.3 bits (113), Expect = 2e-07
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
+GE P+ C C +TF+ L+ H + HT +S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 46.2 bits (110), Expect = 4e-07
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 737 SRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S +GE+P++C +C ++F L+ HQ+ H
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 43.5 bits (103), Expect = 4e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++PY C+ C +TF+ L H + HT ++
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 43.1 bits (102), Expect = 6e-06
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 432 HTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE P+ C CK+ F+ V H HT ++
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 42.7 bits (101), Expect = 8e-06
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKC 496
+GE P+ C C + ++ L H + HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 42.3 bits (100), Expect = 1e-05
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 684 HTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVC 720
+GE P+ C C +TF+ L H K H ++
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 39.2 bits (92), Expect = 1e-04
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
+ + P+ C C ++F+ H HT ++
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 38.5 bits (90), Expect = 2e-04
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFAC 748
+GE + C C + F LV H + HT + +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 35.8 bits (83), Expect = 0.002
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
E+P+ C C + F+ LV H + H +
Sbjct: 8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 33.8 bits (78), Expect = 0.010
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTC 356
+ KP++C C + F L+ H K H S +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 28.1 bits (63), Expect = 1.2
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 800 RSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
E+P+ C C ++F ++ +++H +K HT
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQH-QKMHT 34
Score = 27.3 bits (61), Expect = 2.2
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
++C C + F +++ H++ HT + +
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 53.3 bits (129), Expect = 1e-09
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 401 TRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPH 438
+ +G+ Y+CQ CGK+F +K + H R HTG P
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 53.0 bits (128), Expect = 2e-09
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 598 RQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
+G+ Y+CQ C K+F +K L H R HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 51.0 bits (123), Expect = 8e-09
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPY 606
+G ++C C KSF +K L H R HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 50.3 bits (121), Expect = 2e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPH 690
+G+ ++C C KSF +K L H R+HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPH 578
+G+ ++C C KSF +K L H R HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 48.3 bits (116), Expect = 8e-08
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPH 662
+G+ ++C C +SF +K L H R+HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 48.0 bits (115), Expect = 1e-07
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 737 SRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S +G+R + C +CGKSF KG+L H+R H
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
+G+ + C C K+F +K L H R HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 42.6 bits (101), Expect = 8e-06
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 373 TKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY 410
+ S R Y C C K+F +K L H R HTG P
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPF 494
+G+ + CQ CGK + +K L H R HT P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 41.0 bits (97), Expect = 3e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 684 HTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
+G+ ++C C K+F +K LT H + H G
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGS 36
Score = 40.2 bits (95), Expect = 5e-05
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPH 466
+G+ + C+ C K+F +K H HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 39.9 bits (94), Expect = 7e-05
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFA 747
+G+ + C C K F +K L H R HTG P +
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPH 522
+ ++C+ C KSF +K T H HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPH 808
+R ++C C K F KG L H R H P
Sbjct: 8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 32.2 bits (74), Expect = 0.039
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFT 327
C CGK F + + +H R HT P +
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 31.0 bits (71), Expect = 0.089
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
+ ++ + C CGK+F + L H + H G
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTG 35
Score = 26.4 bits (59), Expect = 4.1
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 800 RSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
+R + C C KSF + + H R
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHER 31
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 53.9 bits (129), Expect = 2e-09
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 7/71 (9%)
Query: 564 HLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVN 623
+ H GD KC+ C F R+ + C+ C K ++ L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 624 HVRQHTGESPH 634
+G+
Sbjct: 58 DEGNESGKKTS 68
Score = 53.5 bits (128), Expect = 2e-09
Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
+ H G+ KC+ C F R+ L C C K ++ L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57
Query: 596 HVRQHTGETPY 606
+G+
Sbjct: 58 DEGNESGKKTS 68
Score = 52.7 bits (126), Expect = 5e-09
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 7/71 (9%)
Query: 620 HLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNN 679
+ H G+ KCS C F R+ + C C K ++ LN
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 680 HIRLHTGESPH 690
+G+
Sbjct: 58 DEGNESGKKTS 68
Score = 50.8 bits (121), Expect = 2e-08
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 368 SLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVN 427
S + K H DR CS C F R+ + C+ C K+ ++ +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 428 HVRKHTGETPH 438
+G+
Sbjct: 58 DEGNESGKKTS 68
Score = 50.0 bits (119), Expect = 5e-08
Identities = 11/71 (15%), Positives = 18/71 (25%), Gaps = 7/71 (9%)
Query: 480 HLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLN 539
+ H D KC C F + C+ C K ++ L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNK 57
Query: 540 HVRQHTGESPH 550
+G+
Sbjct: 58 DEGNESGKKTS 68
Score = 49.7 bits (118), Expect = 5e-08
Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Query: 424 HMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLAN 483
+ H G+ +C C F R+ + +C+ C K ++ L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRS-------TLSRRKTPMCEKCRKDSCQEAALNK 57
Query: 484 HMRSHTNDTPF 494
+ +
Sbjct: 58 DEGNESGKKTS 68
Score = 49.3 bits (117), Expect = 8e-08
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Query: 676 HLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVN 735
++H G+ KC C F R+ L+ +C C K ++ L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNK 57
Query: 736 HSRSHTGERPFA 747
+ +G++
Sbjct: 58 DEGNESGKKTSG 69
Score = 45.0 bits (106), Expect = 2e-06
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 7/72 (9%)
Query: 339 AELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLE 398
K HLG C+ C +F +L R + C C K ++ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 399 NHTRCHTGETPY 410
+G+
Sbjct: 57 KDEGNESGKKTS 68
Score = 44.7 bits (105), Expect = 3e-06
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 13/77 (16%)
Query: 732 HLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTC 791
+ H G+R C+ CG F +RS + + C+ C KD
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIF--------IRRSTLSR-----RKTPMCEKCRKDSCQ 51
Query: 792 KGHLVSHLRSHLNERPH 808
+ L + ++
Sbjct: 52 EAALNKDEGNESGKKTS 68
Score = 41.6 bits (97), Expect = 4e-05
Identities = 10/65 (15%), Positives = 18/65 (27%), Gaps = 7/65 (10%)
Query: 704 HLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLF 763
K H G+ C+ C F + + + C C K + L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNK 57
Query: 764 HQRSH 768
+ +
Sbjct: 58 DEGNE 62
Score = 33.9 bits (77), Expect = 0.019
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 13/70 (18%)
Query: 759 GNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFV 818
G+ Q+ H + +R KC C F + + +C C K
Sbjct: 4 GSSGKRQKIH------LGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSC 50
Query: 819 EHTCMIKHIR 828
+ + K
Sbjct: 51 QEAALNKDEG 60
Score = 33.1 bits (75), Expect = 0.041
Identities = 13/53 (24%), Positives = 16/53 (30%), Gaps = 7/53 (13%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
C CG F + R + RK C C K +A L G
Sbjct: 19 QKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESG 64
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 52.3 bits (126), Expect = 3e-09
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S S GE P+ C CGKSF +G+L HQRS
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 51.9 bits (125), Expect = 4e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPH 438
+ GETPY C CGK+F+++ + H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 50.4 bits (121), Expect = 1e-08
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHK 635
GETPY C C K+F+++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 48.8 bits (117), Expect = 5e-08
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHK 691
GE+P+ C C KSFT++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 48.4 bits (116), Expect = 7e-08
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPY 606
G++P+ C C KSFT++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 47.7 bits (114), Expect = 1e-07
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHK 579
GE+P+ C C KSFT++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 47.3 bits (113), Expect = 2e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHK 663
GE+P+ C C +SFT++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 46.5 bits (111), Expect = 3e-07
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHK 551
GETP+ C C K+FT++ L H R + P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 45.7 bits (109), Expect = 5e-07
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFK 495
GETP++C CGK +T++ LA H RS + P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 41.9 bits (99), Expect = 1e-05
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYK 411
+ + PY C C K+F ++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 41.5 bits (98), Expect = 2e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFA 747
GET ++C C K F ++ L H RS + P +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 41.1 bits (97), Expect = 3e-05
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPH 466
GETP+ C C K+FT++ H + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 40.0 bits (94), Expect = 8e-05
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPH 522
S +TP+ C C KSFT++ H + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 38.8 bits (91), Expect = 2e-04
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPH 808
E P+ C C K FT +G L H RS P
Sbjct: 9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 38.8 bits (91), Expect = 2e-04
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
GE+P+ C C K+FT++ L H + +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQS 37
Score = 33.0 bits (76), Expect = 0.021
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFT 327
+ C CGK F R + VH+R ++ P +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 30.7 bits (70), Expect = 0.13
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
P+ C CGK+F + L H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 29.9 bits (68), Expect = 0.23
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 798 HLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
S E P++C C KSF + + H R +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CS 35
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 54.9 bits (131), Expect = 4e-09
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 3/116 (2%)
Query: 317 RRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRH 376
++Y + K HV + +L K + + T +E S
Sbjct: 11 KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYRLLAS 69
Query: 377 SIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKH 432
+ C +C+ F+ L+ H R E C C K F+ + ++HV K
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 54.2 bits (129), Expect = 7e-09
Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVR 598
++ H G + + R L ++ + + + +
Sbjct: 12 KYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHN-PQLLDESSYLYRLL 67
Query: 599 QHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVR 654
+ + C C FS L H+R E C CK+ FT D +HV
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC 121
Score = 53.8 bits (128), Expect = 9e-09
Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Query: 527 CSKTFTRKEHLLNHVRQHTGESPHKCN----YCAKSFTRKEHLVNHVRQHTGDSPHKCNY 582
T +E H + + + + + S C
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79
Query: 583 CAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQH 628
C F+ L H+R E C C K F+ D ++HV +
Sbjct: 80 CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 53.0 bits (126), Expect = 2e-08
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 461 TGETPHVC--QVCGKKYTRKEHLANHMRSHTNDTPFKC----EICTKSFTRKEHFTNHIM 514
+G ++ + T +E H + + I + + ++
Sbjct: 8 SGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL 67
Query: 515 WHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQH 572
+ C C F+ L H+R E C C K FT + ++HV +
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 52.6 bits (125), Expect = 2e-08
Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 8/115 (6%)
Query: 405 TGETPYKCQY--CGKNFSRKEHMVNHVRKHTGETPHRC----EICKKAFTRKEHYVNHVM 458
+G Y + + + +E H + R I + Y+ ++
Sbjct: 8 SGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL 67
Query: 459 WHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHI 513
+ VC +C ++ L H+R + C +C K FT + +H+
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH--TKVCPVCKKEFTSTDSALDHV 120
Score = 51.1 bits (121), Expect = 8e-08
Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 12/127 (9%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQR 766
+L H G HV +E H + +R K+ LL
Sbjct: 12 KYLSNHKGIFIHVT--------LEELKRYHQLTPEQKRLIRAIV--KTLIHNPQLLDESS 61
Query: 767 SHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKH 826
+ F C +C F+ L H+R E VCP C K F + H
Sbjct: 62 YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119
Query: 827 IRKNHTL 833
+ K H +
Sbjct: 120 VCKKHNI 126
Score = 49.9 bits (118), Expect = 2e-07
Identities = 20/120 (16%), Positives = 33/120 (27%), Gaps = 6/120 (5%)
Query: 593 LVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNH 652
++ H G + R L ++ + Q +
Sbjct: 10 SKKYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYR 65
Query: 653 VRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
+ S C C F+ L HIR E C C K FT + +H+ +
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 48.4 bits (114), Expect = 7e-07
Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Query: 387 CMKTFARKEHLENHTRCHTGETPYKC----QYCGKNFSRKEHMVNHVRKHTGETPHRCEI 442
+E H + + + + + + C +
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79
Query: 443 CKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTN 490
C F+ H+ + E VC VC K++T + +H+ N
Sbjct: 80 CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN 125
Score = 47.6 bits (112), Expect = 1e-06
Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 14/124 (11%)
Query: 621 LVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC----HFCSKSFTRKEH 676
++ H G T ++ H + + + +
Sbjct: 10 SKKYLSNHKG--------IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESS 61
Query: 677 LNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNH 736
+ S C CL F+ L H++ E VC +C K F + ++H
Sbjct: 62 YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119
Query: 737 SRSH 740
Sbjct: 120 VCKK 123
Score = 44.9 bits (105), Expect = 1e-05
Identities = 25/126 (19%), Positives = 37/126 (29%), Gaps = 12/126 (9%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSR 738
++ H G L+ R LT K+ I + L + +
Sbjct: 12 KYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTL-IHNPQLLDESSYLYRLL 67
Query: 739 SHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSH 798
+ F C C F +L H R E C VC K+FT + H
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--------EHTKVCPVCKKEFTSTDSALDH 119
Query: 799 LRSHLN 804
+ N
Sbjct: 120 VCKKHN 125
Score = 41.8 bits (97), Expect = 1e-04
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Query: 310 RYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESL 369
RY + + R + ++ + S + C +C F++ SL
Sbjct: 31 RYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSL 90
Query: 370 QRHTKRHSIDRPYCCSVCMKTFARKEHLENHTR 402
++H + + C VC K F + +H
Sbjct: 91 KQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC 121
Score = 36.1 bits (82), Expect = 0.013
Identities = 12/70 (17%), Positives = 18/70 (25%), Gaps = 2/70 (2%)
Query: 307 FPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANE 366
+ F C +C F L H + C VC F +
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT--KVCPVCKKEFTST 113
Query: 367 ESLQRHTKRH 376
+S H +
Sbjct: 114 DSALDHVCKK 123
Score = 32.6 bits (73), Expect = 0.20
Identities = 14/55 (25%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 290 LDLPVMGNHTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSH 344
L + C LC F + H RY C VC K F + H
Sbjct: 67 LASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 51.6 bits (124), Expect = 5e-09
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQH 628
R TG P+QC C ++FSR DHL H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 48.5 bits (116), Expect = 6e-08
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKH 432
TR TG P++C C ++FSR +H+ H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 46.2 bits (110), Expect = 4e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLH 656
R TG P +C C +SF+R DHL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 45.4 bits (108), Expect = 8e-07
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLH 684
R TG P +C C +SF+R +HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 44.6 bits (106), Expect = 1e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQH 572
R TG P +C C +SF+R +HL H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 44.6 bits (106), Expect = 2e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
R TG P +C C ++F+R +HL H K+H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 43.9 bits (104), Expect = 3e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQH 600
R TG P +C C +SF+R +HL H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 42.3 bits (100), Expect = 8e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
+R TG +PF C DC +SF +L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 42.3 bits (100), Expect = 9e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 456 HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSH 488
TG P C C + ++R +HLA H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.8 bits (96), Expect = 3e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 484 HMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWH 516
R T PF+C C +SF+R +H H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.0 bits (94), Expect = 6e-05
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCH 404
T+ + +P+ C C ++F+R +HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.0 bits (94), Expect = 7e-05
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 512 HIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQH 544
TG P +C C ++F+R +HL H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWH 460
R TG P +C C ++F+R +H H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.018
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHL 349
R T KPF C C ++F L H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 32.7 bits (75), Expect = 0.025
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHL 803
+PF+C C + F+ HL H + H+
Sbjct: 9 IKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 31.2 bits (71), Expect = 0.091
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSH 740
+ G C C + F + +HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.8 bits (70), Expect = 0.11
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 798 HLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
R +P CP C +SF + H +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 51.1 bits (123), Expect = 8e-09
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 652 HVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCD 693
+GE H C C K+F L H R+H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 50.7 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+GE + C C K F L H R H GE S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 49.9 bits (120), Expect = 2e-08
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 400 HTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCE 441
+GE + C CGKNF + H R H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 49.1 bits (118), Expect = 4e-08
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 568 HVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
+G+ H C+ C K+F L H R H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 48.4 bits (116), Expect = 7e-08
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 540 HVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCN 581
+GE H C+ C K+F L H R H G+ +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 47.6 bits (114), Expect = 1e-07
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 624 HVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKC 664
+GE H C C ++F L H R+H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSH 768
S +GE+ C +CGK+F L HQR H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 45.7 bits (109), Expect = 6e-07
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCN 553
+GE H CD C K F L H R H GE +
Sbjct: 7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 42.2 bits (100), Expect = 1e-05
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 680 HIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGE 715
+GE H CD C K F L H + H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE 38
Score = 41.8 bits (99), Expect = 2e-05
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKC 412
S ++ + C C K F L H R H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACT 749
+GE H C+ C K F L H R H GE+ +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 40.3 bits (95), Expect = 6e-05
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
+GE H C CGK + L H R H +
Sbjct: 7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 39.5 bits (93), Expect = 9e-05
Identities = 11/41 (26%), Positives = 13/41 (31%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVC 468
+GE H C+ C K F H H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/44 (20%), Positives = 14/44 (31%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCD 525
+ S + + C+ C K+F H H GE
Sbjct: 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
+ K TC CGK F + + L H + H+G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 35.3 bits (82), Expect = 0.003
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVC 810
S E+ CD C K+F L H R H+ E+
Sbjct: 3 SGSSGSG------EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 33.3 bits (77), Expect = 0.015
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 298 HTCDLCGKFFPYRYQMIVHRRYHTERKPFTC 328
HTCD CGK F Y + +H+R H K
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 30.6 bits (70), Expect = 0.16
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E+ H C C K+F + + H R
Sbjct: 2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR 33
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 47.6 bits (113), Expect = 1e-07
Identities = 12/42 (28%), Positives = 13/42 (30%)
Query: 570 RQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYC 611
C C K F HL H H+GE PY
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 47.2 bits (112), Expect = 2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 710 KQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDC 751
+ C IC K F HL H SH+GE+P++
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 46.1 bits (109), Expect = 6e-07
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 654 RLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFC 695
C C K F HLN H H+GE P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 45.3 bits (107), Expect = 1e-06
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 598 RQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYC 639
C+ C K F HL H H+GE P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 45.3 bits (107), Expect = 1e-06
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCA 556
C+ C K F HL H H+GE P+ +
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 44.9 bits (106), Expect = 1e-06
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCS 668
C C + F HLN H H+GE P+ S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 44.5 bits (105), Expect = 2e-06
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCA 584
C C K F HL H H+G+ P+ +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 44.2 bits (104), Expect = 3e-06
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 401 TRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEIC 443
C+ CGK F H+ H H+GE P+
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 43.8 bits (103), Expect = 3e-06
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 373 TKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYC 415
+ C +C K F HL H H+GE PY
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 43.0 bits (101), Expect = 7e-06
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICT 500
C++CGK + HL H SH+ + P+ +
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 42.6 bits (100), Expect = 9e-06
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCS 528
S CEIC K F H H + H+GE P+ S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 42.6 bits (100), Expect = 9e-06
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVC 471
CEIC K F H H + H+GE P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 39.9 bits (93), Expect = 9e-05
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCS 814
+ C++C K F HL H SH E+P+ S
Sbjct: 10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 39.5 bits (92), Expect = 1e-04
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 297 NHTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVC 331
C++CGK F Y + H+ H+ KP++
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.8 bits (90), Expect = 2e-04
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 682 RLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICS 724
C+ C K F HL H H+GE + S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 34.1 bits (78), Expect = 0.011
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Query: 738 RSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVC 785
S + AC CGK F +L H+ SH E+P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSG------EKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.029
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 318 RYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVC 359
RK C +CGK F L H H G Y+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 31.4 bits (71), Expect = 0.081
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 354 YTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVC 387
C +C +F + L RH HS ++PY
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 47.2 bits (112), Expect = 2e-07
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 595 NHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPH 634
+ GE P++C C + F+++++LV H R H +S
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 46.0 bits (109), Expect = 5e-07
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 399 NHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPH 438
+ GE P+KC C + F+++ ++V H R H ++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 45.2 bits (107), Expect = 9e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 623 NHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPH 662
+ GE+P KCS C + FT++++L H R H +S
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 44.9 bits (106), Expect = 1e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPH 578
+ GE+P KC+ C + FT++ +LV H R H S
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 44.1 bits (104), Expect = 2e-06
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 651 NHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPH 690
+ GE+P KC C + FT++ +L H R H +S
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 43.7 bits (103), Expect = 3e-06
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 735 NHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGE 774
+ S GE PF C+ C + F + L+ H+R+H +++G
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 43.7 bits (103), Expect = 4e-06
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 567 NHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETP 605
+ G++P KC+ C + FT++ +LV H R H ++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 42.9 bits (101), Expect = 6e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 550
GE P +C C + FT++ +L+ H R H +S
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 40.6 bits (95), Expect = 4e-05
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 679 NHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETEH 718
+ GE+P KC C + FT++ +L H + HA ++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 38.7 bits (90), Expect = 2e-04
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 371 RHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETP 409
+ + P+ CS C + F ++ +L H R H ++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 38.3 bits (89), Expect = 3e-04
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 482 ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPH 522
+ S + PFKC C + FT++ + H H ++
Sbjct: 1 GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 37.9 bits (88), Expect = 3e-04
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 427 NHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPH 466
+ GE P +C C + FT++ + V H H ++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 37.1 bits (86), Expect = 6e-04
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 707 NHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERP 745
+ AGE C+ C + F ++ +LV H R+H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 37.1 bits (86), Expect = 9e-04
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLNERPH 808
E PFKC C + FT + +LV H R+H +
Sbjct: 10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 36.0 bits (83), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 455 NHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
+ GE P C C + +T++ +L H R+H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
Score = 30.6 bits (69), Expect = 0.18
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 316 HRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLG 350
PF C C + F + L+ H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 29.1 bits (65), Expect = 0.49
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 797 SHLRSHLNERPHVCPHCSKSFVEHTCMIKHIR 828
S S E P C C + F + +++H R
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 47.6 bits (112), Expect = 8e-07
Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 602 GETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESP 661
+ YQC+ C S +H R + C YC F + H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 662 HKCHFCSKSFTRKEHLNNH 680
C C ++F + H
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 45.3 bits (106), Expect = 5e-06
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
Query: 686 GESPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERP 745
+ ++C C + +H + VC CS F E H S +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 746 FACTDCGKSFPLKGNLLFHQRSHRKQN 772
C +C ++F ++ HQ QN
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 45.3 bits (106), Expect = 6e-06
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 630 GESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESP 689
+ ++C C + +H RL + C +CS F E H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 690 HKCDFCLKTFTRKEHLTNHLKQ 711
C C++TF + H +
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVE 91
Score = 44.1 bits (103), Expect = 1e-05
Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 3/80 (3%)
Query: 462 GETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETP 521
+ + C++C K + +H R N C C+ F E H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 522 HRCDFCSKTFTRKEHLLNHV 541
C C +TF + H
Sbjct: 70 LTCLECMRTFKSSFSIWRHQ 89
Score = 43.0 bits (100), Expect = 3e-05
Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 3/80 (3%)
Query: 574 GDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESP 633
++C C + +H R C YC F + H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 634 HKCSYCKQSFTRKDHLNNHV 653
C C ++F + H
Sbjct: 70 LTCLECMRTFKSSFSIWRHQ 89
Score = 43.0 bits (100), Expect = 3e-05
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 3/80 (3%)
Query: 518 GETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSP 577
+ ++C C+ + +H R + C YC+ F E H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 578 HKCNYCAKSFTRKEHLVNHV 597
C C ++F + H
Sbjct: 70 LTCLECMRTFKSSFSIWRHQ 89
Score = 42.2 bits (98), Expect = 7e-05
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 323 RKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPY 382
++ + C +C E SH + + C C F + E Q H + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKKL 70
Query: 383 CCSVCMKTFARKEHLENH 400
C CM+TF + H
Sbjct: 71 TCLECMRTFKSSFSIWRH 88
Score = 41.8 bits (97), Expect = 8e-05
Identities = 15/88 (17%), Positives = 24/88 (27%), Gaps = 4/88 (4%)
Query: 406 GETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETP 465
+ Y+C+ C S +H R C C F E H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 466 HVCQVCGKKYTRKEHLANH-MRSHTNDT 492
C C + + + H + H +
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHNQNN 97
Score = 41.8 bits (97), Expect = 9e-05
Identities = 14/80 (17%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Query: 546 GESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETP 605
+ ++C C + +H R + C YC+ F E H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 606 YQCQYCPKAFSRKDHLVNHV 625
C C + F + H
Sbjct: 70 LTCLECMRTFKSSFSIWRHQ 89
Score = 41.4 bits (96), Expect = 1e-04
Identities = 16/87 (18%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Query: 372 HTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRK 431
Y C +C + +H R C YC F E H K
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESK 64
Query: 432 HTGETPHRCEICKKAFTRKEHYVNHVM 458
+ C C + F H +
Sbjct: 65 CEYK-KLTCLECMRTFKSSFSIWRHQV 90
Score = 40.7 bits (94), Expect = 2e-04
Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 3/93 (3%)
Query: 658 GESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGETE 717
+ ++C C+ + +H RL + C +C F E H + +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 718 HVCNICSKPFLKKEHLVNHSRSHTGERPFACTD 750
C C + F + H + A T
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS 102
Score = 40.3 bits (93), Expect = 2e-04
Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Query: 428 HVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRS 487
+ ++C +C + +H VC C ++ E H S
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA--VCPYCSLRFFSPELKQEH-ES 63
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHIM 514
C C ++F H +
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 38.7 bits (89), Expect = 0.001
Identities = 14/89 (15%), Positives = 23/89 (25%), Gaps = 3/89 (3%)
Query: 343 SHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTR 402
S +Y C +C ++ H + C C F E + H
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-E 62
Query: 403 CHTGETPYKCQYCGKNFSRKEHMVNHVRK 431
C C + F + H +
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 37.6 bits (86), Expect = 0.003
Identities = 18/110 (16%), Positives = 30/110 (27%), Gaps = 9/110 (8%)
Query: 736 HSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHL 795
+ + + C C H+R R C C F
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--------NAAVCPYCSLRFFSPELK 58
Query: 796 VSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHTLANVNVSPMNSVG 845
H S + C C ++F + +H + H N+ + S G
Sbjct: 59 QEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPSSG 107
Score = 36.8 bits (84), Expect = 0.004
Identities = 17/77 (22%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Query: 299 TCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAV 358
C LC + H R R C C F H + TC
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLE 74
Query: 359 CFHVFANEESLQRHTKR 375
C F + S+ RH
Sbjct: 75 CMRTFKSSFSIWRHQVE 91
Score = 35.3 bits (80), Expect = 0.017
Identities = 13/98 (13%), Positives = 23/98 (23%), Gaps = 9/98 (9%)
Query: 708 HLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRS 767
+ + C +C+ +H R C C F H+
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESK 64
Query: 768 HRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNE 805
+ C C + F + H N+
Sbjct: 65 CE-------YKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 50.1 bits (119), Expect = 3e-06
Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 8 SQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS 67
S P S S + +P PS S S SP + S S SP+ PS S
Sbjct: 1576 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--------S 1627
Query: 68 LTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSS 127
TSP P + + P S + S +SP + T P + P S S SP+S
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP-TSPSYSPTSPSYSPTSPSYSPTS 1686
Query: 128 SSPSSSSQ 135
S S +S
Sbjct: 1687 PSYSPTSP 1694
Score = 49.3 bits (117), Expect = 6e-06
Identities = 38/191 (19%), Positives = 55/191 (28%), Gaps = 7/191 (3%)
Query: 16 TSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSP---- 71
TS V +P +S P SP S + TSPS + + SP
Sbjct: 1531 TSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1590
Query: 72 HQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPS 131
+ PS TSP S + S +SP + + SP + S S
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649
Query: 132 SSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQSPPGQQQQYQQ 191
+S ++ + SPSY T + + P
Sbjct: 1650 TSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709
Query: 192 MDTSQSSQQQS 202
S S S
Sbjct: 1710 Y--SPGSPAYS 1718
Score = 45.5 bits (107), Expect = 1e-04
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
P+ TS S +P PS S S SP + S S SP+ PS + TS
Sbjct: 1610 PSYSPTSPSY---SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP-TS 1665
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSP 130
P P + + P S + S +SP+ + T P + P S S SP
Sbjct: 1666 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP-TSPSYSPTSPGYSPGSPAYSPKQDEQ 1724
Query: 131 SSSSQ 135
+
Sbjct: 1725 KHNEN 1729
Score = 42.4 bits (99), Expect = 9e-04
Identities = 36/195 (18%), Positives = 58/195 (29%), Gaps = 6/195 (3%)
Query: 8 SQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS 67
S + + +P S S + G + +TSP +
Sbjct: 1477 SGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFG 1536
Query: 68 LTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSS 127
++SP P + + P S + S +SP + T P + P S S SP+S
Sbjct: 1537 VSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTS 1595
Query: 128 SSPSSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQSPPGQQQ 187
S S +S S T SP+ + + + SP
Sbjct: 1596 PSYSPTSP--SYSPTSPSYSPTSPSYSPTSPSYSPTSPSY---SPTSPSYSPTSPSYSPT 1650
Query: 188 QYQQMDTSQSSQQQS 202
TS + S
Sbjct: 1651 SPSYSPTSPAYSPTS 1665
Score = 38.9 bits (90), Expect = 0.008
Identities = 34/194 (17%), Positives = 51/194 (26%), Gaps = 19/194 (9%)
Query: 12 ASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHT--LTSLT 69
+ + D + +E N + SP S + T+
Sbjct: 1453 YMPEQKITEIEDGQDGGVTPYSNESGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYG 1512
Query: 70 SPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSS 129
SP P +SP + PG + P S S SP+S S
Sbjct: 1513 GADYGEATSPFGAYGEAP---------TSPGFGV-SSPGFSPTSPTYSPTSPAYSPTSPS 1562
Query: 130 PSSSSQLMQQGGGGGS-NGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQSPPGQQQQ 188
S +S S ++ + SPSY + + SP
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT------SPSYSPTSPSYSPTS 1616
Query: 189 YQQMDTSQSSQQQS 202
TS S S
Sbjct: 1617 PSYSPTSPSYSPTS 1630
Score = 37.0 bits (85), Expect = 0.039
Identities = 40/199 (20%), Positives = 59/199 (29%), Gaps = 25/199 (12%)
Query: 12 ASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSP 71
++ + ++D S + S + ++GGF + + TSP
Sbjct: 1474 SNESGLVNADLDVKDELMFSPLVD--SGSNDAMAGGFTAYGGADYGE---------ATSP 1522
Query: 72 HQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPS 131
+P TSP +S S +SP + T P SP S+ PS S +SPS
Sbjct: 1523 FGAYGEAP--TSPGFGVSSPGF-SPTSPTYSP-TSPA--YSPTSPSYSPTSPSYSPTSPS 1576
Query: 132 SSSQLMQQGGGGGSNGQTHLHIQNIGAVLSP--------SYGQHCIQQDDTQHSTVQSPP 183
S S T SP S + S SP
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 184 GQQQQYQQMDTSQSSQQQS 202
S +S S
Sbjct: 1637 SPSYSPTSPSYSPTSPSYS 1655
Score = 31.2 bits (70), Expect = 1.8
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 11/83 (13%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGS---EPPSPNTGGVSGGFISTSP--SQPSPQHGHHTL 65
P S S + +P PS S S P SP+ S + TSP S SP +
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGY----- 1710
Query: 66 TSLTSPHQMPPPSPIATSPPPPS 88
S SP P + S
Sbjct: 1711 -SPGSPAYSPKQDEQKHNENENS 1732
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 43.5 bits (103), Expect = 3e-06
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGE 407
R + C VC + FAR+EHL+ H R HT E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 43.1 bits (102), Expect = 5e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTGE 687
C C+++F R+EHL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 41.5 bits (98), Expect = 1e-05
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTGE 603
C C ++F R+EHL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 41.1 bits (97), Expect = 2e-05
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGE 547
C+ C++ F R+EHL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 40.8 bits (96), Expect = 3e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKHTGE 435
+ C+ C + F+R+EH+ H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 40.4 bits (95), Expect = 4e-05
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTGE 631
+ C+ C +AF+R++HL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 39.6 bits (93), Expect = 7e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGD 575
C C ++F R+EHL H R HT +
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 39.6 bits (93), Expect = 7e-05
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 718 HVCNICSKPFLKKEHLVNHSRSHTGER 744
VC +C++ F ++EHL H RSHT E+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGE 659
C C ++F R++HL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 38.8 bits (91), Expect = 1e-04
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHTND 491
VC+VC + + R+EHL H RSHTN+
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 38.8 bits (91), Expect = 1e-04
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 493 PFKCEICTKSFTRKEHFTNHIMWHTGE 519
F CE+CT++F R+EH H HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 36.1 bits (84), Expect = 0.001
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 437 PHRCEICKKAFTRKEHYVNHVMWHTGE 463
CE+C +AF R+EH H HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 36.1 bits (84), Expect = 0.001
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 689 PHKCDFCLKTFTRKEHLTNHLKQHAGE 715
C+ C + F R+EHL H + H E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 34.2 bits (79), Expect = 0.006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 778 RPFKCDVCPKDFTCKGHLVSHLRSHLNER 806
R F C+VC + F + HL H RSH NE+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.1 bits (63), Expect = 1.00
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 744 RPFACTDCGKSFPLKGNLLFHQRSH 768
R F C C ++F + +L H RSH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 49.3 bits (117), Expect = 6e-06
Identities = 37/124 (29%), Positives = 49/124 (39%), Gaps = 9/124 (7%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
P S S + +P PS S S SP + S S SP+ PS S TS
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--------SPTS 1687
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSP 130
P P + + P S + S +SP + T P + P S S SP+S S
Sbjct: 1688 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSY 1746
Query: 131 SSSS 134
S +S
Sbjct: 1747 SPTS 1750
Score = 47.8 bits (113), Expect = 2e-05
Identities = 50/213 (23%), Positives = 63/213 (29%), Gaps = 26/213 (12%)
Query: 10 FPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQP-SPQHGHHTLTSL 68
+ S P +S S SP G S + +SP SP +
Sbjct: 1520 GDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAY------MP 1573
Query: 69 TSPHQMP------PPSPI--ATSP------PPPSASDKHDSQSSPHITQHTGPGIFQSPP 114
+SP P P SP TSP P SA+ S +SP + + SP
Sbjct: 1574 SSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPS 1633
Query: 115 --PTSHISKIPSP--SSSSPSSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSP-SYGQHCI 169
PTS SP S +SPS S S T SP S
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1693
Query: 170 QQDDTQHSTVQSPPGQQQQYQQMDTSQSSQQQS 202
+ S SP S +S S
Sbjct: 1694 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1726
Score = 47.0 bits (111), Expect = 3e-05
Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 8/112 (7%)
Query: 23 DTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIAT 82
+ SP G S G+ S S SP +G LTSP P SP +
Sbjct: 1514 EGREGFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYG------LTSP-SYSPSSPGYS 1566
Query: 83 SPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSS 134
+ P S S +SP + T P + P S S S +S S S +S
Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSATSPSYSPTS 1617
Score = 44.3 bits (104), Expect = 2e-04
Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 21/145 (14%)
Query: 11 PASHK---TSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS 67
P S TS S +P ++S P SP+ S + TSPS SP ++ TS
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSPSYSPTS 1645
Query: 68 L----TSPHQMPPPSPIATSPPPPSASDKHDSQSSPHIT-------------QHTGPGIF 110
TSP P + + P S + S +SP + T P
Sbjct: 1646 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1705
Query: 111 QSPPPTSHISKIPSPSSSSPSSSSQ 135
+ P S S SP+S S S +S
Sbjct: 1706 PTSPSYSPTSPSYSPTSPSYSPTSP 1730
Score = 41.6 bits (97), Expect = 0.001
Identities = 40/129 (31%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQP--SPQHGHHTLTS- 67
P S S + +P PS S S SP + S S SP+ P SP ++ TS
Sbjct: 1622 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Query: 68 ---LTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPS 124
TSP P + + P S + S +SP + T P PTS PS
Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-TSPSYS----PTS-----PS 1731
Query: 125 PSSSSPSSS 133
S +SPS S
Sbjct: 1732 YSPTSPSYS 1740
Score = 41.2 bits (96), Expect = 0.002
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSP--SQPSPQHGHHTLTSL 68
P+ TS S +P +S P SP+ S + TSP S SP + S
Sbjct: 1667 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY------SP 1720
Query: 69 TSPHQMPPPSPIATSPPPPSASDKHDSQSSP 99
TSP P + + P S + S +SP
Sbjct: 1721 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
Score = 37.7 bits (87), Expect = 0.020
Identities = 31/136 (22%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 8 SQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVS---GGFISTSPSQPSPQHGHHT 64
SQ P T S + SP G S GF + +
Sbjct: 1476 SQLPEGAGTPYERSPMVDSGFVGSPDAAAFSPLVQGGSEGREGFGDYGLLGAASPYKGVQ 1535
Query: 65 LTSLTSPHQMP------PPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSH 118
TSP SP + P ++ SSP + T P + P S
Sbjct: 1536 SPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYS-PTSPSYSPTSPSYSP 1594
Query: 119 ISKIPSPSSSSPSSSS 134
S SP+S S S++S
Sbjct: 1595 TSPSYSPTSPSYSATS 1610
Score = 33.5 bits (76), Expect = 0.43
Identities = 24/112 (21%), Positives = 33/112 (29%), Gaps = 13/112 (11%)
Query: 27 PPSSSRGSEPPSPNTGGVSGGFISTSPSQ---PSPQHGHHTLTSLTSPHQMPPPSPIATS 83
G+ P + V GF+ + + P Q G + SP
Sbjct: 1475 TSQLPEGAGTPYERSPMVDSGFVGSPDAAAFSPLVQGGSEGREGFGDYGLLGAASPYKGV 1534
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSS-SPSSSS 134
P S + S PG + P S S S S + PSS S
Sbjct: 1535 QSPGYTSPFSSAMS---------PGYGLTSPSYSPSSPGYSTSPAYMPSSPS 1577
Score = 32.0 bits (72), Expect = 1.1
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 9 QFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSL 68
P+ TS S +P +S P SP+ S + TSP SP ++ TS
Sbjct: 1679 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTS- 1736
Query: 69 TSPHQMPPPSPIATSPPPPS 88
P SP + SP PS
Sbjct: 1737 ---PSYSPTSP-SYSPTSPS 1752
Score = 31.6 bits (71), Expect = 1.5
Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 2/112 (1%)
Query: 22 VDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMP--PPSP 79
+D + S G+ P+ G+ + P + + SP P
Sbjct: 1451 LDQDMLMNYSLGTAVPTLAGSGMGTSQLPEGAGTPYERSPMVDSGFVGSPDAAAFSPLVQ 1510
Query: 80 IATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPS 131
+ +SP+ + S + SPS S S
Sbjct: 1511 GGSEGREGFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSS 1562
Score = 29.3 bits (65), Expect = 8.8
Identities = 19/114 (16%), Positives = 27/114 (23%), Gaps = 3/114 (2%)
Query: 54 SQPSPQHGHHTLTSLTSPHQMPPPSPIATSP--PPPSASDKHDSQSSPHITQHTGPGIFQ 111
S + TS +P SP + SP + Q G
Sbjct: 1460 SLGTAVPTLAGSGMGTSQLPEGAGTPYERSPMVDSGFVGSPDAAAFSP-LVQGGSEGREG 1518
Query: 112 SPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYG 165
+ P SP +S G + G SP+Y
Sbjct: 1519 FGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYM 1572
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein,
abnormal nuclear; zinc-finger, beta barrel, VWA domain,
gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP:
a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Length = 926
Score = 47.1 bits (111), Expect = 2e-05
Identities = 28/184 (15%), Positives = 48/184 (26%), Gaps = 23/184 (12%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSP 84
P ++ P P G+S G + P P G + P Q I +
Sbjct: 21 TPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLT---PAQEQLHQQIDQAT 77
Query: 85 PPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGG 144
+ H P + P + Q QQ
Sbjct: 78 TSMN-------DMHLHNVPLVDPNAYMQPQV-----------PVQMGTPLQQQQQPMAAP 119
Query: 145 SNGQTHLHIQNIGAVLSPSYGQHCIQQDD--TQHSTVQSPPGQQQQYQQMDTSQSSQQQS 202
+ GQ + ++ Y + + T+ PP + + S+ S
Sbjct: 120 AYGQPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSNASP 179
Query: 203 DLIK 206
D I+
Sbjct: 180 DYIR 183
Score = 44.0 bits (103), Expect = 2e-04
Identities = 15/153 (9%), Positives = 32/153 (20%), Gaps = 6/153 (3%)
Query: 49 ISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPG 108
+S + PQ L P A PP + S +
Sbjct: 1 MSHHKKRVYPQ------AQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVP 54
Query: 109 IFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHC 168
+ + ++S M + ++ Q + +P Q
Sbjct: 55 SMGQQQFLTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQ 114
Query: 169 IQQDDTQHSTVQSPPGQQQQYQQMDTSQSSQQQ 201
+ + Q+ +
Sbjct: 115 PMAAPAYGQPSAAMGQNMRPMNQLYPIDLLTEL 147
Score = 42.9 bits (100), Expect = 6e-04
Identities = 18/194 (9%), Positives = 37/194 (19%), Gaps = 12/194 (6%)
Query: 9 QFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSL 68
+P + P +P + G Q T
Sbjct: 8 VYPQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQE 67
Query: 69 TSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSS 128
Q+ + + + Q PS++
Sbjct: 68 QLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAA 127
Query: 129 SPSSSSQLMQ----------QGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHST 178
+ + Q + +L PS + D ST
Sbjct: 128 MGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSNA--SPDYIRST 185
Query: 179 VQSPPGQQQQYQQM 192
+ + P ++
Sbjct: 186 LNAVPKNSSLLKKS 199
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 44.3 bits (103), Expect = 5e-05
Identities = 18/119 (15%), Positives = 27/119 (22%), Gaps = 3/119 (2%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPS---PQHGHHTLTSLTSPHQMPPPSPI 80
+P R + P P G G + SPSQ P T Q S
Sbjct: 3 SPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLF 62
Query: 81 ATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQ 139
+ P + + + P + + SS
Sbjct: 63 EDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPAT 121
Score = 38.5 bits (88), Expect = 0.005
Identities = 16/125 (12%), Positives = 26/125 (20%), Gaps = 9/125 (7%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
PA T + +P PP +T S Q +
Sbjct: 18 PAGGATPGATLPKSPSQLRKGPPVPPPPKHT---------PSKEVKQEQILSLFEDTFVP 68
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSP 130
+ PS A + + P T + P +
Sbjct: 69 EISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEG 128
Query: 131 SSSSQ 135
S +
Sbjct: 129 GSGAG 133
Score = 37.0 bits (84), Expect = 0.017
Identities = 13/112 (11%), Positives = 33/112 (29%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATS 83
P ++ + P SP+ PS + + SL +P S S
Sbjct: 17 EPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPS 76
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQ 135
P ++ +Q + + ++ + + + ++ +
Sbjct: 77 QPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEG 128
Score = 34.7 bits (78), Expect = 0.083
Identities = 13/107 (12%), Positives = 23/107 (21%), Gaps = 7/107 (6%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATS 83
PPPP + E +S P+ T + ++ + A
Sbjct: 41 VPPPPKHTPSKEVKQEQI-------LSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAG 93
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSP 130
P + ++ SS S
Sbjct: 94 AQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPG 140
Score = 34.3 bits (77), Expect = 0.12
Identities = 12/130 (9%), Positives = 30/130 (23%), Gaps = 2/130 (1%)
Query: 74 MPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSS 133
P P P+ + +Q PP + ++ S
Sbjct: 5 AATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFED 64
Query: 134 SQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQSPPGQQQQYQQMD 193
+ + + S Q + G + Q + ++ ++ P + +
Sbjct: 65 TFVPEISVTTPS--QPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATV 122
Query: 194 TSQSSQQQSD 203
Sbjct: 123 NGTVEGGSGA 132
Score = 31.2 bits (69), Expect = 1.2
Identities = 10/111 (9%), Positives = 19/111 (17%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
P+ + + PS E IS + + + +
Sbjct: 32 PSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPA 91
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISK 121
P A+ S + G
Sbjct: 92 AGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFM 142
Score = 29.7 bits (65), Expect = 3.9
Identities = 19/152 (12%), Positives = 34/152 (22%), Gaps = 10/152 (6%)
Query: 77 PSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQL 136
SP AT + + ++P T P + PP K
Sbjct: 2 GSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQIL-- 59
Query: 137 MQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQSPPGQQQQYQQMDTSQ 196
S + + S + + Q P +
Sbjct: 60 --------SLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLP 111
Query: 197 SSQQQSDLIKTNGTGDVNPDEFNQLLAYHEVF 228
+ ++ NGT + L +F
Sbjct: 112 AVVVETFPATVNGTVEGGSGAGRLDLPPGFMF 143
>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus
interaction, metal-binding, nucleus, receptor,
transcription, transcription regulation, zinc-FIN
activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB:
3dzu_A* 3e00_A*
Length = 467
Score = 45.5 bits (107), Expect = 6e-05
Identities = 19/140 (13%), Positives = 35/140 (25%), Gaps = 3/140 (2%)
Query: 7 LSQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLT 66
++ H T S + + S + S P SP H ++
Sbjct: 1 MAHHHHHHVDDDDKMFSTQVNSSLTSPTGRGSMAAPSLHP---SLGPGIGSPGQLHSPIS 57
Query: 67 SLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPS 126
+L+SP P S P S + + + + P +S P
Sbjct: 58 TLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLG 117
Query: 127 SSSPSSSSQLMQQGGGGGSN 146
+ +
Sbjct: 118 LNGVLKVPAHPSGNMASFTK 137
Score = 34.7 bits (79), Expect = 0.13
Identities = 15/102 (14%), Positives = 22/102 (21%), Gaps = 3/102 (2%)
Query: 51 TSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIF 110
++ + + P+ + P SP Q P
Sbjct: 2 AHHHHHHVDDDDKMFSTQVN-SSLTSPTGRGSMAAPSLHPSLGPGIGSP--GQLHSPIST 58
Query: 111 QSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGGSNGQTHLH 152
S P SS S + G S G L
Sbjct: 59 LSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLS 100
Score = 33.9 bits (77), Expect = 0.23
Identities = 18/141 (12%), Positives = 30/141 (21%), Gaps = 10/141 (7%)
Query: 49 ISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPG 108
+ S Q SLTSP + + P Q I+ + P
Sbjct: 9 VDDDDKMFSTQVNS----SLTSPTGRGSMA-APSLHPSLGPGIGSPGQLHSPISTLSSPI 63
Query: 109 IFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHC 168
PP + S S S G + Q + + +
Sbjct: 64 NGMGPPFSVI-----SSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGL 118
Query: 169 IQQDDTQHSTVQSPPGQQQQY 189
+ +
Sbjct: 119 NGVLKVPAHPSGNMASFTKHI 139
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 39.5 bits (93), Expect = 7e-05
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 605 PYQCQY--CPKAFSRKDHLVNHVRQHTGE 631
P+ C + C K F+R D L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 38.0 bits (89), Expect = 3e-04
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 409 PYKCQY--CGKNFSRKEHMVNHVRKHTGE 435
P+ C + CGK F+R + + H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 37.6 bits (88), Expect = 4e-04
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 577 PHKCNY--CAKSFTRKEHLVNHVRQHTGE 603
P C + C K FTR + L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 37.2 bits (87), Expect = 5e-04
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 661 PHKCHF--CSKSFTRKEHLNNHIRLHTGE 687
P C + C K FTR + L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 36.8 bits (86), Expect = 7e-04
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 521 PHRCDF--CSKTFTRKEHLLNHVRQHTGE 547
P C + C K FTR + L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 36.8 bits (86), Expect = 7e-04
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 380 RPYCCSV--CMKTFARKEHLENHTRCHTGE 407
RP+ C+ C K F R + L+ H R HTGE
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 36.4 bits (85), Expect = 0.001
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 633 PHKCSY--CKQSFTRKDHLNNHVRLHTGE 659
P C++ C + FTR D L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 549 PHKCNY--CAKSFTRKEHLVNHVRQHTGD 575
P C + C K FTR + L H R HTG+
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 34.1 bits (79), Expect = 0.006
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 465 PHVCQV--CGKKYTRKEHLANHMRSHTND 491
P +C CGK++TR + L H R+HT +
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 32.2 bits (74), Expect = 0.032
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 689 PHKCDF--CLKTFTRKEHLTNHLKQHAGE 715
P C + C K FTR + L H + H GE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 31.4 bits (72), Expect = 0.064
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 493 PFKC--EICTKSFTRKEHFTNHIMWHTGE 519
PF C C K FTR + H HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 29.1 bits (66), Expect = 0.35
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 778 RPFKCDV--CPKDFTCKGHLVSHLRSHLNER 806
RPF C C K FT L H R+H E+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.1 bits (66), Expect = 0.45
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 744 RPFACT--DCGKSFPLKGNLLFHQRSH 768
RPF CT CGK F L H+R+H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 28.7 bits (65), Expect = 0.51
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 718 HVCNI--CSKPFLKKEHLVNHSRSHTGER 744
+C C K F + + L H R+HTGE+
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.8 bits (60), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 437 PHRC--EICKKAFTRKEHYVNHVMWHTGE 463
P C C K FTR + H HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos
taurus} SCOP: i.9.1.1
Length = 390
Score = 43.7 bits (102), Expect = 2e-04
Identities = 25/134 (18%), Positives = 37/134 (27%), Gaps = 6/134 (4%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
S T + P SS P S G + +P +P P G +
Sbjct: 258 SVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSG----TWNPGRPEP--GSAGTWNPGR 311
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSP 130
P + P P SA + + P PG + + + SS P
Sbjct: 312 PEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNTGSSGSSSFRP 371
Query: 131 SSSSQLMQQGGGGG 144
SS +
Sbjct: 372 DSSGHGNIRPSSPD 385
Score = 41.4 bits (96), Expect = 0.001
Identities = 25/147 (17%), Positives = 39/147 (26%), Gaps = 3/147 (2%)
Query: 1 MPIQCELSQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQH 60
E+ Q +T S G P SP G + + +P P
Sbjct: 232 WKALLEMQQTKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPG-TSSIGNVNPGSYGPGS 290
Query: 61 GHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHIS 120
P +P P P SA + + P PG + +
Sbjct: 291 SGTWNPGRPEPGSAGTWNP--GRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNP 348
Query: 121 KIPSPSSSSPSSSSQLMQQGGGGGSNG 147
P P S+ ++ S+G
Sbjct: 349 GRPEPGSAGTWNTGSSGSSSFRPDSSG 375
Score = 39.5 bits (91), Expect = 0.004
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 7/127 (5%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATS 83
T + G ++ G SP +P + P +P
Sbjct: 241 TKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNP--GR 298
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGG 143
P P SA + + P PG + + +P P S+
Sbjct: 299 PEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGT-----WNPGRPEPGSAGTWNPGRPEP 353
Query: 144 GSNGQTH 150
GS G +
Sbjct: 354 GSAGTWN 360
Score = 36.0 bits (82), Expect = 0.053
Identities = 19/180 (10%), Positives = 37/180 (20%), Gaps = 7/180 (3%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
P K+ + ++ GG + G +S
Sbjct: 218 PREFKSQLQEAPLEWKALLEMQQTKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSS 277
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSP 130
+ P S S + + PG + P +
Sbjct: 278 IGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGR 337
Query: 131 SSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQSPPGQQQQYQ 190
G G G + S G + D + H ++ ++
Sbjct: 338 PEPGSAGTWNPGRPEPGSA-------GTWNTGSSGSSSFRPDSSGHGNIRPSSPDWGTFR 390
Score = 35.2 bits (80), Expect = 0.093
Identities = 18/146 (12%), Positives = 31/146 (21%), Gaps = 5/146 (3%)
Query: 9 QFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSL 68
S P S+ E P + +
Sbjct: 201 DIQYLPILKMSTITGPVPREFKSQLQEAPLEWKALLEMQQTKMVLETFGGDGHARGDSVS 260
Query: 69 T----SPHQMPPPSPIATSPPPPSASDKHDSQS-SPHITQHTGPGIFQSPPPTSHISKIP 123
+P P + P + S + +P + G + P +
Sbjct: 261 QGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAGTW 320
Query: 124 SPSSSSPSSSSQLMQQGGGGGSNGQT 149
+P P S+ GS G
Sbjct: 321 NPGRPEPGSAGTWNPGRPEPGSAGTW 346
Score = 34.5 bits (78), Expect = 0.15
Identities = 15/127 (11%), Positives = 29/127 (22%), Gaps = 3/127 (2%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPP---PSPIA 81
P S TG V F S P + + +
Sbjct: 198 PSRDIQYLPILKMSTITGPVPREFKSQLQEAPLEWKALLEMQQTKMVLETFGGDGHARGD 257
Query: 82 TSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGG 141
+ + + + PG + + P P S+ + +
Sbjct: 258 SVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSA 317
Query: 142 GGGSNGQ 148
G + G+
Sbjct: 318 GTWNPGR 324
Score = 34.5 bits (78), Expect = 0.15
Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 7/111 (6%)
Query: 8 SQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS 67
+ P S+ +S + P S G+ P G +G + +P +P P G +
Sbjct: 280 NVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAG---TWNPGRPEP--GSAGTWN 334
Query: 68 LTSPHQMPPPSPIATSPPPPSASDKH--DSQSSPHITQHTGPGIFQSPPPT 116
P + P P SA + S SS +G G + P
Sbjct: 335 PGRPEPGSAGTWNPGRPEPGSAGTWNTGSSGSSSFRPDSSGHGNIRPSSPD 385
Score = 29.1 bits (64), Expect = 6.5
Identities = 16/124 (12%), Positives = 26/124 (20%), Gaps = 4/124 (3%)
Query: 26 PPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPP 85
+ P + S P +P + + +
Sbjct: 188 LEQVIAINLLPSRDIQ---YLPILKMSTI-TGPVPREFKSQLQEAPLEWKALLEMQQTKM 243
Query: 86 PPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGGS 145
++Q TG P + +P S P SS GS
Sbjct: 244 VLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGS 303
Query: 146 NGQT 149
G
Sbjct: 304 AGTW 307
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance,
extracellular module, genetic disorder, corneal
dystrophy; HET: NAG; 2.6A {Drosophila melanogaster}
SCOP: b.118.1.1 b.118.1.1
Length = 324
Score = 43.4 bits (102), Expect = 2e-04
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Query: 214 NPDEFNQLLAYHEVFGKLQSSVVTHTSSTLGLASTSTAQGDMNSAADNGVSGTNSVITNN 273
+ ++ Q+L H + +L + + +A T + + G+++VIT
Sbjct: 69 DRNKMRQILNMHIIKDRLNVDKIRQK-NANLIAQVPTVNNNTFLYFNVRGEGSDTVITVE 127
Query: 274 STENNTTSITLDIKAD 289
N T I D+
Sbjct: 128 GGGVNATVIQADVAQT 143
Score = 29.2 bits (65), Expect = 7.2
Identities = 7/77 (9%), Positives = 14/77 (18%), Gaps = 4/77 (5%)
Query: 214 NPDEFNQLLAYHEVFGKLQSSVVTHTSSTLGLAST-STAQGDMNSAADNGVSGTNSVITN 272
+L H + ++ + S D S V
Sbjct: 223 FSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIR---VEEEAGRYVI 279
Query: 273 NSTENNTTSITLDIKAD 289
D++
Sbjct: 280 IWNYKKINVYRPDVECT 296
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid
cyclase fold, DDXXXXD motif, NDXXSXXXE MOT
methylisoborneol biosynthesis; HET: GST; 1.80A
{Streptomyces coelicolor} PDB: 3v1x_A*
Length = 433
Score = 43.2 bits (101), Expect = 3e-04
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 8 SQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS 67
S F A+ ++ PPPP + PP TG I P+ P G +L
Sbjct: 33 SDFLAALHPPVTVPDPAPPPPPAPAAGNPPDTVTGDSVLQRILRGPTGP----GTTSLAP 88
Query: 68 LTSPHQMPPPSPIATSPPPPS 88
+ P P A++PP
Sbjct: 89 AVRYGRQPGPEAPASAPPAAG 109
Score = 39.7 bits (92), Expect = 0.003
Identities = 15/107 (14%), Positives = 25/107 (23%), Gaps = 3/107 (2%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS--L 68
P T PP + + P ++ L
Sbjct: 16 PRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPDTVTGDSVLQRIL 75
Query: 69 TSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPP 115
P P + +A + S+P PG++ P P
Sbjct: 76 RGPTG-PGTTSLAPAVRYGRQPGPEAPASAPPAAGRAVPGLYHHPVP 121
Score = 39.7 bits (92), Expect = 0.003
Identities = 16/100 (16%), Positives = 23/100 (23%), Gaps = 2/100 (2%)
Query: 28 PSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPP- 86
S P + S + + H ++ P PPP+P A +PP
Sbjct: 5 HHHHHHSSGLVPRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPDT 64
Query: 87 -PSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSP 125
S P T S
Sbjct: 65 VTGDSVLQRILRGPTGPGTTSLAPAVRYGRQPGPEAPASA 104
Score = 37.0 bits (85), Expect = 0.028
Identities = 12/112 (10%), Positives = 25/112 (22%), Gaps = 11/112 (9%)
Query: 34 SEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKH 93
+ G + + + + + P P +PPPP A
Sbjct: 6 HHHHHSSGLVPRGSHMVIPSASVTS-----AASDFLAALHPPVTVP-DPAPPPPPAP--A 57
Query: 94 DSQSSPHITQHTGPGIFQSPP---PTSHISKIPSPSSSSPSSSSQLMQQGGG 142
+T + P T+ ++ + G
Sbjct: 58 AGNPPDTVTGDSVLQRILRGPTGPGTTSLAPAVRYGRQPGPEAPASAPPAAG 109
Score = 35.1 bits (80), Expect = 0.087
Identities = 10/78 (12%), Positives = 18/78 (23%), Gaps = 2/78 (2%)
Query: 69 TSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQS--PPPTSHISKIPSPS 126
+S H S + + ++ P + PP +P
Sbjct: 3 SSHHHHHHSSGLVPRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPP 62
Query: 127 SSSPSSSSQLMQQGGGGG 144
+ S G G
Sbjct: 63 DTVTGDSVLQRILRGPTG 80
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 38.1 bits (89), Expect = 3e-04
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 657 TGESPHKCHF--CSKSFTRKEHLNNHIRLHTGE 687
+ H CH C K + + HL H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 36.9 bits (86), Expect = 7e-04
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 517 TGETPHRCDF--CSKTFTRKEHLLNHVRQHTGE 547
+ H C C K + + HL H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 36.6 bits (85), Expect = 0.001
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 577 PHKCNY--CAKSFTRKEHLVNHVRQHTGE 603
H C+ C K + + HL H+R HTGE
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 35.0 bits (81), Expect = 0.003
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 380 RPYCCSV--CMKTFARKEHLENHTRCHTGE 407
+ + C + C K + + HL H R HTGE
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 35.0 bits (81), Expect = 0.004
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 405 TGETPYKCQY--CGKNFSRKEHMVNHVRKHTGE 435
+ + C CGK + + H+ H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 35.0 bits (81), Expect = 0.004
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 545 TGESPHKCNY--CAKSFTRKEHLVNHVRQHTGD 575
+ H C+ C K + + HL H+R HTG+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 34.6 bits (80), Expect = 0.005
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 718 HVCNI--CSKPFLKKEHLVNHSRSHTGER 744
H+C+I C K + K HL H R HTGER
Sbjct: 9 HICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 34.6 bits (80), Expect = 0.005
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 461 TGETPHVCQV--CGKKYTRKEHLANHMRSHT 489
+ H+C + CGK Y + HL H+R HT
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHT 34
Score = 34.3 bits (79), Expect = 0.007
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 629 TGESPHKCSY--CKQSFTRKDHLNNHVRLHTGE 659
+ H C C + + + HL H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 33.9 bits (78), Expect = 0.009
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 601 TGETPYQCQY--CPKAFSRKDHLVNHVRQHTGE 631
+ + C C K + + HL H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 32.3 bits (74), Expect = 0.029
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 685 TGESPHKCDF--CLKTFTRKEHLTNHLKQHAGE 715
+ H C C K + + HL HL+ H GE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 31.6 bits (72), Expect = 0.060
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 433 TGETPHRCEI--CKKAFTRKEHYVNHVMWHTGE 463
+ H C I C K + + H H+ WHTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 31.2 bits (71), Expect = 0.089
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 493 PFKCEI--CTKSFTRKEHFTNHIMWHTGE 519
C I C K + + H H+ WHTGE
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 29.2 bits (66), Expect = 0.36
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 777 ERPFKCDV--CPKDFTCKGHLVSHLRSHLNER 806
++ C + C K + HL +HLR H ER
Sbjct: 6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
>3tx7_B Nuclear receptor subfamily 5 group A member 2; LRH-1, beta-catenin,
armadillo repeat, nuclear receptor LIGA binding domain,
protein binding; HET: P6L; 2.76A {Homo sapiens}
Length = 352
Score = 40.7 bits (95), Expect = 0.001
Identities = 20/121 (16%), Positives = 31/121 (25%), Gaps = 3/121 (2%)
Query: 19 SMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPS 78
S++++ + P S S P SP P S
Sbjct: 1 SLKLEAMSQ---VIQAMPSDLTISSAIQNIHSASKGLPLNHAALPPTDYDRSPFVTSPIS 57
Query: 79 PIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQ 138
+ S I SP S + S +SSP+S L+
Sbjct: 58 MTMPPHGSLQGYQTYGHFPSRAIKSEYPDPYTSSPESIMGYSYMDSYQTSSPASIPHLIL 117
Query: 139 Q 139
+
Sbjct: 118 E 118
Score = 33.4 bits (76), Expect = 0.32
Identities = 16/137 (11%), Positives = 33/137 (24%), Gaps = 9/137 (6%)
Query: 1 MPIQCELSQFPASHKTSTS---MEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPS 57
MP +S + +++ + PP R SP + +
Sbjct: 14 MPSDLTISSAIQNIHSASKGLPLNHAALPPTDYDRSPFVTSPISMTMP------PHGSLQ 67
Query: 58 PQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTS 117
+ S + P P + + SSP H + + P
Sbjct: 68 GYQTYGHFPSRAIKSEYPDPYTSSPESIMGYSYMDSYQTSSPASIPHLILELLKCEPDEP 127
Query: 118 HISKIPSPSSSSPSSSS 134
+ ++
Sbjct: 128 QVQAKIMAYLQQEQANR 144
Score = 31.1 bits (70), Expect = 1.5
Identities = 10/81 (12%), Positives = 15/81 (18%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSP 84
P S +P + + + G S SP H + L P
Sbjct: 76 PSRAIKSEYPDPYTSSPESIMGYSYMDSYQTSSPASIPHLILELLKCEPDEPQVQAKIMA 135
Query: 85 PPPSASDKHDSQSSPHITQHT 105
Sbjct: 136 YLQQEQANRSKHEKLSTFGLM 156
Score = 31.1 bits (70), Expect = 1.6
Identities = 18/133 (13%), Positives = 30/133 (22%), Gaps = 3/133 (2%)
Query: 8 SQFPASHKTSTSMEVDTPP---PPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHT 64
P +H + D P P S S G F S + P +
Sbjct: 32 KGLPLNHAALPPTDYDRSPFVTSPISMTMPPHGSLQGYQTYGHFPSRAIKSEYPDPYTSS 91
Query: 65 LTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPS 124
S+ M + + P + + Q Q + S
Sbjct: 92 PESIMGYSYMDSYQTSSPASIPHLILELLKCEPDEPQVQAKIMAYLQQEQANRSKHEKLS 151
Query: 125 PSSSSPSSSSQLM 137
+ Q +
Sbjct: 152 TFGLMCKMADQTL 164
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 41.0 bits (95), Expect = 0.002
Identities = 10/64 (15%), Positives = 16/64 (25%)
Query: 716 TEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEV 775
+ + S K V + + + C C +L H SH
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMT 210
Query: 776 LERP 779
L
Sbjct: 211 LTSS 214
Score = 36.0 bits (82), Expect = 0.065
Identities = 10/53 (18%), Positives = 14/53 (26%)
Query: 576 SPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQH 628
S + ++ V + YQC C L HV H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 35.6 bits (81), Expect = 0.084
Identities = 21/169 (12%), Positives = 44/169 (26%), Gaps = 12/169 (7%)
Query: 180 QSPPGQQQQYQQMDTSQSSQQQSDLIKTNGTGDVNPDEFNQLLAYHEVFGKLQSSVVTHT 239
S Q + + + Q + + ++L N + N + +
Sbjct: 47 TSNREQYRARPGIASVQRATESAELPMKNNDEGTPDKKGNT------------RGDLVNE 94
Query: 240 SSTLGLASTSTAQGDMNSAADNGVSGTNSVITNNSTENNTTSITLDIKADLDLPVMGNHT 299
S + Q + T S N+ + S +D + + M
Sbjct: 95 HSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRI 154
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCH 348
+ + + + CHVC +L +H H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 35.6 bits (81), Expect = 0.089
Identities = 23/212 (10%), Positives = 48/212 (22%), Gaps = 19/212 (8%)
Query: 171 QDDTQHSTVQSPPGQQQQYQQMDTSQSSQQQSDLIKTNGTGDVNPDEFNQLLAYHEVFGK 230
+ + S + Q T G N +++ V
Sbjct: 9 KGKSSGKGNDSTERSDDGSS---QLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQRA 65
Query: 231 LQSSVVTHTSSTLGL----ASTSTAQGDMNSAADNGVSGTNSVITNNSTENNTTSITLDI 286
+S+ + ++ G +T + +S A + ++ ++ D
Sbjct: 66 TESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDT 125
Query: 287 KADLDLPVMGNHTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGK 346
+ + + D G +
Sbjct: 126 GINNANELSRSGNVDNEG------------GSNQKPMSTRIAEATSAIVSKHPARVGLPP 173
Query: 347 CHLGGSMYTCAVCFHVFANEESLQRHTKRHSI 378
G Y C VC V + L H H +
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASHGL 205
Score = 34.4 bits (78), Expect = 0.19
Identities = 8/59 (13%), Positives = 16/59 (27%)
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQH 544
+ + E + ++ + ++C CS L HV H
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.1 bits (77), Expect = 0.27
Identities = 9/59 (15%), Positives = 15/59 (25%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSH 488
+ E ++ V + + C VC L H+ SH
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.33
Identities = 8/59 (13%), Positives = 15/59 (25%)
Query: 598 RQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLH 656
+ + S+ V + ++C C L+ HV H
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.34
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 688 SPHKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSH 740
S + ++ + + C++CS L H SH
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.34
Identities = 7/53 (13%), Positives = 17/53 (32%)
Query: 520 TPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQH 572
+ + S ++ + + ++C+ C+ L HV H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.38
Identities = 6/49 (12%), Positives = 11/49 (22%)
Query: 384 CSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKH 432
++ + Y+C C + HV H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.3 bits (75), Expect = 0.42
Identities = 8/59 (13%), Positives = 16/59 (27%)
Query: 542 RQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQH 600
S + ++ V + ++C+ C+ L HV H
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.3 bits (75), Expect = 0.43
Identities = 7/53 (13%), Positives = 13/53 (24%)
Query: 660 SPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
S S ++ + ++C C L H+ H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 32.1 bits (72), Expect = 1.1
Identities = 8/59 (13%), Positives = 15/59 (25%)
Query: 626 RQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLH 684
S ++ + ++CH CS L+ H+ H
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 31.0 bits (69), Expect = 2.2
Identities = 6/76 (7%), Positives = 20/76 (26%)
Query: 764 HQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCM 823
+ + + + + V + + + C CS +
Sbjct: 137 GNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDL 196
Query: 824 IKHIRKNHTLANVNVS 839
H+ + N+ ++
Sbjct: 197 DAHVASHGLHGNMTLT 212
Score = 31.0 bits (69), Expect = 2.3
Identities = 9/53 (16%), Positives = 13/53 (24%)
Query: 352 SMYTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCH 404
S + + + S Y C VC L+ H H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 29.8 bits (66), Expect = 4.8
Identities = 7/53 (13%), Positives = 14/53 (26%)
Query: 408 TPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWH 460
+ + S+ V + ++C +C HV H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 29.1 bits (64), Expect = 8.5
Identities = 4/53 (7%), Positives = 17/53 (32%)
Query: 464 TPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWH 516
+ + + ++ + ++ ++C +C+ H+ H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
>3g9h_A Suppressor of yeast profilin deletion; SYP1, MU, adaptor,
endocytosis, phosphoprotein; HET: 1PG; 2.80A
{Saccharomyces cerevisiae}
Length = 328
Score = 40.1 bits (93), Expect = 0.002
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 57 SPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKH-DSQSSPHITQHTGPGIFQSPPP 115
S H HH+ + M P++T + + + Q++ T G +FQ
Sbjct: 4 SHHHHHHSSGLVPRGSHMASERPVSTLSSQITGELRELNPQATGSSTSLVGQSLFQHSSL 63
Query: 116 TSH 118
+
Sbjct: 64 DTS 66
Score = 30.9 bits (69), Expect = 1.7
Identities = 8/72 (11%), Positives = 14/72 (19%)
Query: 12 ASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSP 71
S P S P S + ++G +P +
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMASERPVSTLSSQITGELRELNPQATGSSTSLVGQSLFQHS 61
Query: 72 HQMPPPSPIATS 83
+ S
Sbjct: 62 SLDTSQFGLNAS 73
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 37.4 bits (86), Expect = 0.003
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 591 EHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVR-QHTG---ESPHKCSYCKQSFTRK 646
H ++ + E Y+C+YC + HV +H S + C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 647 DHLNNHV-RLHTGESPHKC 664
D L+ H + H GE K
Sbjct: 64 DALSEHNLKYHPGEENFKL 82
Score = 37.4 bits (86), Expect = 0.003
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 563 EHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVR-QHTG---ETPYQCQYCPKAFSRK 618
H ++ + + ++C YC HV +H + Y C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 619 DHLVNHV-RQHTGESPHKCSYCKQS 642
D L H + H GE K + K++
Sbjct: 64 DALSEHNLKYHPGEENFKLTMVKRN 88
Score = 36.7 bits (84), Expect = 0.004
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 535 EHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVR-QHTG---DSPHKCNYCAKSFTRK 590
H ++ + E ++C YC HV +H +S + C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 591 EHLVNHV-RQHTGETPYQCQ 609
+ L H + H GE ++
Sbjct: 64 DALSEHNLKYHPGEENFKLT 83
Score = 34.0 bits (77), Expect = 0.042
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 479 EHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHI-MWHTG---ETPHRCDFCSKTFTRK 534
H ++ ++ + ++C+ CT FT H+ H + + C C+ R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 535 EHLLNHV-RQHTGESPHKCN 553
+ L H + H GE K
Sbjct: 64 DALSEHNLKYHPGEENFKLT 83
Score = 33.6 bits (76), Expect = 0.050
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 619 DHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRL-HTG---ESPHKCHFCSKSFTRK 674
H ++ + E ++C YC + HV H S + C C+ R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 675 EHLNNHI-RLHTGESPHKCD 693
+ L+ H + H GE K
Sbjct: 64 DALSEHNLKYHPGEENFKLT 83
Score = 33.2 bits (75), Expect = 0.065
Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 762 LFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRS-HLNER---PHVCPHCSKSF 817
+ H H Q + +E ++C C H+ S H N +VC C+
Sbjct: 1 MAHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 818 VEHTCMIKHIRKNHT 832
+ + +H K H
Sbjct: 61 KRYDALSEHNLKYHP 75
Score = 32.4 bits (73), Expect = 0.13
Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Query: 367 ESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENH-TRCHTG---ETPYKCQYCGKNFSRK 422
+ + ++ Y C C H H + Y C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 423 EHMVNHVRK-HTGETPHRCEICKK 445
+ + H K H GE + + K+
Sbjct: 64 DALSEHNLKYHPGEENFKLTMVKR 87
Score = 30.9 bits (69), Expect = 0.48
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 675 EHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHL-KQHAG---ETEHVCNICSKPFLKK 730
H +++ + E ++C +C T H+ +H + +VC C+ +
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 731 EHLVNH-SRSHTGERPFACT 749
+ L H + H GE F T
Sbjct: 64 DALSEHNLKYHPGEENFKLT 83
Score = 29.7 bits (66), Expect = 1.1
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 5/81 (6%)
Query: 423 EHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHV-MWHTG---ETPHVCQVCGKKYTRK 478
H ++ + E + C+ C + HV H + +VC C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 479 EHLANH-MRSHTNDTPFKCEI 498
+ L+ H ++ H + FK +
Sbjct: 64 DALSEHNLKYHPGEENFKLTM 84
Score = 28.2 bits (62), Expect = 4.3
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 451 EHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRS-HTN---DTPFKCEICTKSFTRK 506
H+ ++ E + C+ C + H+ S H N ++ + C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 507 EHFTNHIM-WHTGETP 521
+ + H + +H GE
Sbjct: 64 DALSEHNLKYHPGEEN 79
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 35.3 bits (80), Expect = 0.004
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHTG 434
+GE PY C CG F RK+ M HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 34.9 bits (79), Expect = 0.005
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHTG 630
+GE PY C C F RKD + HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.4 bits (75), Expect = 0.017
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHTG 658
+GE P+ C C F RKD ++ HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.6 bits (73), Expect = 0.033
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTG 406
S ++PY C VC F RK+ + H R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.2 bits (72), Expect = 0.041
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSH 488
+GE P+ C VCG ++ RK+ ++ H+RSH
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 31.8 bits (71), Expect = 0.054
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHTG 574
+GE P+ C C F RK+ + HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.8 bits (71), Expect = 0.055
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTG 686
+GE P+ C C F RK+ ++ H+R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.0 bits (69), Expect = 0.14
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 684 HTGESPHKCDFCLKTFTRKEHLTNHLKQHAG 714
+GE P+ C C F RK+ ++ H++ H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 30.7 bits (68), Expect = 0.15
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHTG 602
+G+ P+ C C F RK+ + HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 30.7 bits (68), Expect = 0.15
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTG 546
+GE P+ C C F RK+ + HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 30.3 bits (67), Expect = 0.26
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHIMWHTG 518
+ + P+ C +C F RK+ + H+ H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 29.9 bits (66), Expect = 0.35
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 737 SRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGE 774
S +GE+P++C CG F K + +H RSH G+
Sbjct: 2 SSGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
Score = 29.5 bits (65), Expect = 0.39
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 432 HTGETPHRCEICKKAFTRKEHYVNHVMWHTG 462
+GE P+ C +C F RK+ HV H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.6 bits (60), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 772 NGEVLERPFKCDVCPKDFTCKGHLVSHLRSH 802
+G E+P+ C VC F K + H+RSH
Sbjct: 3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 27.2 bits (59), Expect = 3.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHTG 742
+GE + C +C F +K+ + H RSH G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 26.8 bits (58), Expect = 3.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGG 351
+ KP++C VCG F + + H + H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 37.4 bits (86), Expect = 0.008
Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 9/138 (6%)
Query: 378 IDRPYCCSVCMKTFARKEHLEN-HTRC------HTGETPYKCQYCGKNFSRKEHM-VNHV 429
++ Y C +C+ H C + +KC + + N
Sbjct: 15 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFA 74
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
++ +C + ++ H C C + + + H+ H+
Sbjct: 75 KREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKF-HINIHILKDC 133
Query: 490 NDTPFKCEICTKSFTRKE 507
C+ C S ++
Sbjct: 134 PRRQVSCDNCAASMAFED 151
Score = 34.7 bits (79), Expect = 0.053
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 10/131 (7%)
Query: 541 VRQHTGESPHKCNYCAKSFTRKEHL-VNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQ 599
+ + ++ HKC + + N ++ KC + + +
Sbjct: 45 IIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQA 104
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGE 659
H C C + F + H+ H+ + C C S +D +H
Sbjct: 105 HCEFALMDCPQCQRPFQKF-HINIHILKDCPRRQVSCDNCAASMAFED-----KEIHDQN 158
Query: 660 SP---HKCHFC 667
P H
Sbjct: 159 CPLALEHHHHH 169
Score = 33.5 bits (76), Expect = 0.15
Identities = 18/123 (14%), Positives = 33/123 (26%), Gaps = 10/123 (8%)
Query: 465 PHVCQVCGKKYTRKEHL-ANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHR 523
H C V + + N + KC + H
Sbjct: 53 GHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMD 112
Query: 524 CDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSP---HKC 580
C C + F + H+ H+ + C+ CA S ++ H + P
Sbjct: 113 CPQCQRPFQKF-HINIHILKDCPRRQVSCDNCAASMAFED-----KEIHDQNCPLALEHH 166
Query: 581 NYC 583
++
Sbjct: 167 HHH 169
Score = 33.1 bits (75), Expect = 0.20
Identities = 16/116 (13%), Positives = 34/116 (29%), Gaps = 3/116 (2%)
Query: 597 VRQHTGETPYQCQYCPKAFSRKDHL-VNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRL 655
+ + + ++C + N ++ KC + +
Sbjct: 45 IIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQA 104
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQ 711
H + C C + F + H+N HI CD C + ++ H +
Sbjct: 105 HCEFALMDCPQCQRPFQKF-HINIHILKDCPRRQVSCDNCAASMAFED-KEIHDQN 158
Score = 31.2 bits (70), Expect = 0.76
Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 11/129 (8%)
Query: 320 HTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVFANEESLQRHTKRHSID 379
C V + + + C + + RH + H
Sbjct: 48 SIRDAGHKCPVDNEILLE--NQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAH 105
Query: 380 RPYC---CSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGET 436
+ C C + F + H+ H C C + + ++ H
Sbjct: 106 CEFALMDCPQCQRPFQKF-HINIHILKDCPRRQVSCDNCAASMAFED-----KEIHDQNC 159
Query: 437 PHRCEICKK 445
P E
Sbjct: 160 PLALEHHHH 168
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase,
membrane traffic, coiled coil, exocytosis,
phosphoprotein; HET: GNP; 2.60A {Saccharomyces
cerevisiae}
Length = 320
Score = 38.4 bits (88), Expect = 0.009
Identities = 9/79 (11%), Positives = 27/79 (34%)
Query: 50 STSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGI 109
S + + + G + + + + S P + +++ + + + P
Sbjct: 242 SYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVSTPAS 301
Query: 110 FQSPPPTSHISKIPSPSSS 128
+ ++K P S+S
Sbjct: 302 VEYHAGMKSLNKAPYSSNS 320
Score = 34.1 bits (77), Expect = 0.19
Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Query: 6 ELSQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTL 65
L + T+ P S + + + G T ++ S + +
Sbjct: 237 YLDERSYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPV 296
Query: 66 TSLTSPHQMPPPSPIATSPPPPSAS 90
++ + + P S S
Sbjct: 297 ST-PASVEYHAGMKSLNKAPYSSNS 320
Score = 31.8 bits (71), Expect = 0.84
Identities = 15/82 (18%), Positives = 28/82 (34%)
Query: 54 SQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSP 113
P+ + L+ + + I P S S + + TQ G F +P
Sbjct: 222 EGHVPELVNWDLSLFYLDERSYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAP 281
Query: 114 PPTSHISKIPSPSSSSPSSSSQ 135
+ S+ S + S +S +
Sbjct: 282 TERTRRSETESVNPVSTPASVE 303
Score = 30.3 bits (67), Expect = 3.1
Identities = 6/72 (8%), Positives = 23/72 (31%)
Query: 69 TSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSS 128
+ + P+++ ++ S + P T ++ + +P+S
Sbjct: 243 YQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVSTPASV 302
Query: 129 SPSSSSQLMQQG 140
+ + + +
Sbjct: 303 EYHAGMKSLNKA 314
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane
fusion, viral P glycoprotein B, HSV-1, membrane; HET:
NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A*
3nwd_A*
Length = 703
Score = 38.4 bits (89), Expect = 0.010
Identities = 15/117 (12%), Positives = 26/117 (22%), Gaps = 1/117 (0%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSP-IATS 83
P P+S + G P+ + G P PP P +
Sbjct: 2 PAAPTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNA 61
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQG 140
+ + PP + + + P Q +G
Sbjct: 62 TVAAGHATLREHLRDIKAENTDANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEG 118
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane
protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP:
c.30.1.5 d.142.1.3 PDB: 1px2_A*
Length = 422
Score = 37.9 bits (87), Expect = 0.015
Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 1/101 (0%)
Query: 45 SGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQH 104
F++ P+ P +P ++ + +SP
Sbjct: 11 DSNFMANLPNGYMTDLQRPQPPPPPPSAASPGATP-GSAAASAERASTAAPVASPAAPSP 69
Query: 105 TGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGGS 145
G S+ K + ++++ S GG G
Sbjct: 70 GSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRG 110
Score = 36.0 bits (82), Expect = 0.054
Identities = 14/110 (12%), Positives = 24/110 (21%), Gaps = 14/110 (12%)
Query: 8 SQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTS 67
+ P + T PPPPS++ P + + P
Sbjct: 16 ANLPNGYMTDLQRPQPPPPPPSAASPGATPGSAAASAERASTAAPVASP----------- 64
Query: 68 LTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTS 117
P S S + K + ++ G
Sbjct: 65 ---AAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGG 111
Score = 33.3 bits (75), Expect = 0.42
Identities = 13/108 (12%), Positives = 29/108 (26%), Gaps = 2/108 (1%)
Query: 29 SSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPS 88
S+ + P+ + P PS T S + + + SP PS
Sbjct: 11 DSNFMANLPNGYMTDLQRP--QPPPPPPSAASPGATPGSAAASAERASTAAPVASPAAPS 68
Query: 89 ASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQL 136
++ + S S + +++++
Sbjct: 69 PGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAAARV 116
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 33.2 bits (75), Expect = 0.016
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTGE 631
P QC C KAF++ L+ HVRQHTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 32.4 bits (73), Expect = 0.028
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTGE 603
P +C C K+FT+ L+ HVRQHTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 31.7 bits (71), Expect = 0.049
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGE 547
P +C C K FT+ L+ HVRQHTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 31.3 bits (70), Expect = 0.072
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGD 575
P +C C K+FT+ L+ HVRQHTG+
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 30.9 bits (69), Expect = 0.087
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKHTGE 435
P +C CGK F++ ++ HVR+HTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 27.8 bits (61), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 437 PHRCEICKKAFTRKEHYVNHVMWHTGE 463
P +C +C KAFT+ + HV HTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 27.8 bits (61), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTGE 687
P +C C K+FT+ L H+R HTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 27.4 bits (60), Expect = 1.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 719 VCNICSKPFLKKEHLVNHSRSHTGER 744
C +C K F + L+ H R HTGE+
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 27.0 bits (59), Expect = 2.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHTND 491
P C +CGK +T+ L H+R HT +
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 26.3 bits (57), Expect = 3.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGE 659
P +C C ++FT+ L HVR HTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 26.3 bits (57), Expect = 4.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 493 PFKCEICTKSFTRKEHFTNHIMWHTGE 519
P +C +C K+FT+ H+ HTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 26.3 bits (57), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 778 RPFKCDVCPKDFTCKGHLVSHLRSHLNER 806
+P +C +C K FT L++H+R H E+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 25.9 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 689 PHKCDFCLKTFTRKEHLTNHLKQHAGE 715
P +C C K FT+ L H++QH GE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 25.9 bits (56), Expect = 6.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 324 KPFTCHVCGKAFDFQAELMSHGKCHLG 350
KP C +CGKAF + L++H + H G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 25.1 bits (54), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGE 407
+P C +C K F + L H R HTGE
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGE 28
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.7 bits (87), Expect = 0.018
Identities = 60/370 (16%), Positives = 94/370 (25%), Gaps = 144/370 (38%)
Query: 49 ISTSPSQPSP--QHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHI--TQ- 103
+ + G + L L +P P + + P S P I Q
Sbjct: 198 LIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIP-----------ISCPLIGVIQL 246
Query: 104 -H-------TG--PGIFQSPPP--TSHISKIPSPSSSSPSSSSQLMQQGGGGGSNGQTHL 151
H G PG +S T H + + + + + S + + + +
Sbjct: 247 AHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFV------SVRKAI 300
Query: 152 HIQ-NIGA---------VLSPSYGQHCIQQDDTQHS-TVQSPPGQQQQYQQM----DTSQ 196
+ IG L PS I +D +++ V SP M + +Q
Sbjct: 301 TVLFFIGVRCYEAYPNTSLPPS-----ILEDSLENNEGVPSP---------MLSISNLTQ 346
Query: 197 SSQQQSDLIKTNGTGD---------VN-PDEF-------------NQLLAYHEVFGKLQS 233
Q Q + KTN VN L G QS
Sbjct: 347 -EQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQS 405
Query: 234 SV---------------VT---HTSSTLGLASTSTAQGDMNSAADNGVSGTNSVITNNST 275
+ V H S L A + D+
Sbjct: 406 RIPFSERKLKFSNRFLPVASPFH-SHLLVPA-SDLINKDL-------------------- 443
Query: 276 ENNTTSITLDIKA-DLDLPVM----GNHTCDLCGKFFPYRYQMIVHRRYH---TERKPFT 327
+ A D+ +PV G+ L G I+ T + T
Sbjct: 444 ----VKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKAT 499
Query: 328 CHVCGKAFDF 337
H+ DF
Sbjct: 500 -HI----LDF 504
Score = 36.6 bits (84), Expect = 0.044
Identities = 61/462 (13%), Positives = 107/462 (23%), Gaps = 163/462 (35%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSG--GFISTSPSQPSPQHGH-------------------- 62
P P + P+ V G++S S +PS
Sbjct: 42 PEPTEGFAADDEPTTPAELVGKFLGYVS-SLVEPSKVGQFDQVLNLCLTEFENCYLEGND 100
Query: 63 -HTLT-SLTSPHQMPPP---------------SPIATSPPPPSA-SDKHDSQSSPHITQH 104
H L L + + SA ++ +
Sbjct: 101 IHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIF 160
Query: 105 TGPG-----------IFQSPPP-----TSHISKIPSPSSSSPSSSSQLMQQGGGGGSNGQ 148
G G ++Q+ ++ S + + ++ QG
Sbjct: 161 GGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQG-------- 212
Query: 149 THLHIQN--IGAVLSPSYGQHCIQQDDTQHSTVQSPPG----QQQQYQQMDTSQSSQQQS 202
L+I +P +D + S P Q Y
Sbjct: 213 --LNILEWLENPSNTPD-------KDYLLSIPI-SCPLIGVIQLAHY------------- 249
Query: 203 DLIKTNGTGDVNPDEFNQLLAYHEVFGK-LQSSVVTHTSST-----------------LG 244
++ G P E L + L ++V + + +G
Sbjct: 250 -VVTAKLLG-FTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIG 307
Query: 245 LAS------TSTAQGDMNSAADNG---------VSGTN-----SVI--TNNST-ENNTTS 281
+ TS + + +N +S + TN+
Sbjct: 308 VRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVE 367
Query: 282 ITLDIKADLDLPVMGNHTCDLCG--------KFFPYRYQMIVHRRYHTERK--------- 324
I+L + +L V G L G K Q R +ERK
Sbjct: 368 ISL-VNGAKNLVVSG-PPQSLYGLNLTLRKAKAPSGLDQ---SRIPFSERKLKFSNRFLP 422
Query: 325 ---PFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVCFHVF 363
PF H+ A D + + V + F
Sbjct: 423 VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPV-YDTF 463
Score = 35.8 bits (82), Expect = 0.085
Identities = 35/241 (14%), Positives = 63/241 (26%), Gaps = 83/241 (34%)
Query: 709 LKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGE-------RPFACTDCGKSF------ 755
+ Q A H L ++ + TG A TD +SF
Sbjct: 243 VIQLA----HYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRK 298
Query: 756 PLKGNLLFHQ--RSHR---------------KQNGEVLERPFKCDVCPKDFTCKG----H 794
+ +LF R + +N E + P +
Sbjct: 299 AIT--VLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPM--------LSISNLTQEQ 348
Query: 795 LVSHLR---SHLNERPHVCPHCS-----KSFV--------EHTCMIKHIRKNHTLANVNV 838
+ ++ SHL V S K+ V + +RK + ++
Sbjct: 349 VQDYVNKTNSHLPAGKQV--EISLVNGAKNLVVSGPPQSLYGLNL--TLRKAKAPSGLDQ 404
Query: 839 S--PMNS--VGTQHNMLPHTMSSIPLSHS--MSTITHT-----NNTTTPVAPIALVVPVA 887
S P + + + LP + P HS + + + +PV
Sbjct: 405 SRIPFSERKLKFSNRFLP---VASPF-HSHLLVPASDLINKDLVKNNVSFNAKDIQIPVY 460
Query: 888 H 888
Sbjct: 461 D 461
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 34.9 bits (79), Expect = 0.020
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 381 PYCCSVCMKTFAR-KEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETP 437
P C V KT K+H+E C + KCQ+C K F K + H P
Sbjct: 28 PTCNVVTRKTLVGLKKHMEV---CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici
SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens}
PDB: 3cw1_A
Length = 231
Score = 36.5 bits (84), Expect = 0.021
Identities = 19/120 (15%), Positives = 27/120 (22%), Gaps = 15/120 (12%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSP 84
P P + G P GG S +PQ + A+
Sbjct: 118 VPMPQAPAGLAGPVRGVGG-------PSQQVMTPQGR--------GTVAAAAAAATASIA 162
Query: 85 PPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGGG 144
P+ P + + P PPP P + M G
Sbjct: 163 GAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRP 222
Score = 35.8 bits (82), Expect = 0.037
Identities = 23/142 (16%), Positives = 29/142 (20%), Gaps = 12/142 (8%)
Query: 19 SMEVDTPPPPSSSRGSEPPSPNTGGVSGGF-------ISTSPSQP-----SPQHGHHTLT 66
SM V+ PPP + P + GG G Q P G +
Sbjct: 79 SMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPS 138
Query: 67 SLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPS 126
Q A + S + G PP P
Sbjct: 139 QQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPP 198
Query: 127 SSSPSSSSQLMQQGGGGGSNGQ 148
P G G
Sbjct: 199 MGPPMGIPPGRGTPMGMPPPGM 220
Score = 32.7 bits (74), Expect = 0.45
Identities = 16/115 (13%), Positives = 27/115 (23%), Gaps = 3/115 (2%)
Query: 1 MPIQCELSQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQH 60
+P + Q PA + +G + + P +
Sbjct: 114 IPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRG 173
Query: 61 GHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPP 115
G +P P PP + +P P + PPP
Sbjct: 174 GPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTP---MGMPPPGMRPPPP 225
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.024
Identities = 39/263 (14%), Positives = 74/263 (28%), Gaps = 69/263 (26%)
Query: 676 HLNNHIRLHTGESPHKCDFCLKTFTRK-------EHLTNHLKQ--HAGETEHVCN----- 721
H ++H+ TGE ++ L F + + + K E +H+
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 722 ---------ICSKP------FLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQR 766
+ SK F+++ +N+ + P S + ++ ++
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQRQPSMMTR---MYIEQ 115
Query: 767 SHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNE-RPH--VCPH----CSKS-FV 818
R N + F K + LR L E RP V K+
Sbjct: 116 RDRLYND---NQVF-----AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA 167
Query: 819 EHTCMIKHIRKNH-------TLANVNVSPMNSVGTQHNMLPHTMSS--IPLSHSMSTITH 869
C+ ++ L N N SP + +L + HS +
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCN-SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226
Query: 870 TNNTTT--------PVAPIALVV 884
++ L+V
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLV 249
Score = 36.4 bits (83), Expect = 0.054
Identities = 70/530 (13%), Positives = 128/530 (24%), Gaps = 192/530 (36%)
Query: 389 KTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFT 448
+ + ++E R + + +Y N SR + +R+ E
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFA-KY---NVSRLQ-PYLKLRQALLEL------------ 147
Query: 449 RKEHYVN-HVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKE 507
R V + G GK + +A ++C S+ +
Sbjct: 148 RPAKNVLIDGV--LG--------SGKTW-----VAL-------------DVC-LSYKVQC 178
Query: 508 HFTNHIMWHT-GE--TPH-------------------RCDFCSKTFTRKEHLLNHVRQHT 545
I W +P R D S R + +R+
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 546 GESPHK---------CN-YCAKSF---------TRKEHLVNHV----RQHTGDSPHKCNY 582
P++ N +F TR + + + + H H
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS--- 295
Query: 583 CAKSFTRKEH---LVNHVRQHTGETPYQ-CQYCPKAFS-----RKDHLV--NHVRQHTGE 631
+ T E L+ ++ + P + P+ S +D L ++ + +
Sbjct: 296 --MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 632 SPHKCSYCKQSFTRKDHLNNHVRLHTGES----------------PHK------------ 663
K + + LN L E P
Sbjct: 354 --------KLTTIIESSLNV---LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402
Query: 664 ------CHFCSKSFTRKEHLNNHIRLH------TGESP-----HK---------CDFCLK 697
S K+ + I + + H+ F
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 698 TFTRK-------EHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTD 750
H+ +HLK E + + FL L R H A
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKN-IEHPERM-TLFRMVFLDFRFLEQKIR-HDS---TAWNA 516
Query: 751 CGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDF--TCKGHLVSH 798
G L F+ + + N ER + DF + +L+
Sbjct: 517 SGSILNTLQQLKFY-KPYICDNDPKYER-LVNAI--LDFLPKIEENLICS 562
Score = 34.4 bits (78), Expect = 0.20
Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 54/210 (25%)
Query: 156 IGAVLSPSYG--QHCIQQDDTQHSTVQSPPGQQQQY-QQMDTSQSSQQQSDLIKTNGTGD 212
+ VL +Y I+ + Q P + Y +Q D + Q K N
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQRDRLYNDNQV--FAKYN---- 130
Query: 213 VN-PDEFNQLLAYHEVFGKLQSS--VVTHTSSTLG--------LASTSTAQGDMNSAADN 261
V+ + +L + +L+ + V+ G +A + D
Sbjct: 131 VSRLQPYLKL---RQALLELRPAKNVLID-----GVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 262 GVSGTNSVITNNSTENNTTSI--TLDIKADLDLPVMGNHTCDLCGKFFPYRYQMIVHR-R 318
+ N + N ++ + L + D + +H+ ++ R I R
Sbjct: 183 KIFWLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI-----KLRIHSIQAELR 235
Query: 319 YHTERKPF-TC-----HVCG----KAFDFQ 338
+ KP+ C +V AF+
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Score = 30.2 bits (67), Expect = 4.2
Identities = 69/567 (12%), Positives = 146/567 (25%), Gaps = 174/567 (30%)
Query: 396 HLENHTRCHTGETPYKC----QYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKE 451
H +H TGE Y+ F V+ ++ K +++E
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAF-VDNFDCKDVQ----------DMPKSILSKEE 50
Query: 452 HYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTN 511
++H++ + L + S + + F + N
Sbjct: 51 --IDHII----MSKDAVS-------GTLRLFWTLLSKQEEM-------VQKFVEEVLRIN 90
Query: 512 H--IMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHV 569
+ +M +P + + + + ++ R + AK + +
Sbjct: 91 YKFLM-----SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF-----AKYNVSRLQPYLKL 140
Query: 570 RQH-TGDSPHKCNY--------CAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDH 620
RQ P K K++ + V C ++ +
Sbjct: 141 RQALLELRPAK--NVLIDGVLGSGKTW-----VALDV----------CL----SYKVQCK 179
Query: 621 LVNHVRQHTGESPH--KCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFT---RKE 675
+ + C T + L L P+ S R
Sbjct: 180 MDFKI--------FWLNLKNCNSPETVLEMLQK---LLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 676 HLNNHIRLHTGESPHK-C-----DFC----LKTF---------TRKEHLTNHLKQHAGET 716
+ +R P++ C + F TR + +T+ L A T
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS--AATT 286
Query: 717 EHVC-NICSKPFLKKEHL------VNHS-----RSHTGERPFACTDCGKSFPLKGNLL-- 762
H+ + S E ++ R P + +S ++ L
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES--IRDGLATW 344
Query: 763 --FHQRSHRKQNG------EVLE-----RPFK-CDVCPKD----------------FTCK 792
+ + K VLE + F V P +
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 793 GHLVSHL--RSHLNERP-------H-----VCPHCSKSFVEHTCMIKHIRKNHTLANVNV 838
+V+ L S + ++P + + H ++ H T + ++
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 839 SPMNSVGTQHNMLPHTMSSIPLSHSMS 865
P ++ + H + +I M+
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMT 491
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 32.0 bits (72), Expect = 0.039
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGE 659
P+ C +C++ F L HVR+HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 31.3 bits (70), Expect = 0.066
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTGE 631
PY C +C + F+ L HVR HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 30.5 bits (68), Expect = 0.14
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGE 407
+PY C C + FA L+ H R HTGE
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 30.5 bits (68), Expect = 0.15
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTGE 687
P+ C C + F L H+R+HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 30.1 bits (67), Expect = 0.19
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKHTGE 435
PY C +C + F+ + HVR HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 29.3 bits (65), Expect = 0.34
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTGE 603
P+ C +C + F L HVR HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 28.2 bits (62), Expect = 0.94
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGD 575
P+ C +C + F L HVR HTG+
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 28.2 bits (62), Expect = 1.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGE 547
P+ C C + F L HVR HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 25.9 bits (56), Expect = 5.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 806 RPHVCPHCSKSFVEHTCMIKHIR 828
+P+VC HC + F + + +H+R
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVR 24
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 32.0 bits (72), Expect = 0.043
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHTN 490
+G+ P VC++C +T K + A H++ HT+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 30.5 bits (68), Expect = 0.14
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHT 685
+G+ P C C +FT K + H+++HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 30.5 bits (68), Expect = 0.15
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHT 405
S RP+ C +C+ F K + H + HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 30.1 bits (67), Expect = 0.17
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHT 629
+G+ P+ C+ C AF+ K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 30.1 bits (67), Expect = 0.19
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHT 657
+G+ P C C +FT K + H+++HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 29.3 bits (65), Expect = 0.34
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 740 HTGERPFACTDCGKSFPLKGNLLFHQRSH 768
+G+RPF C C +F K N H + H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.3 bits (65), Expect = 0.36
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
+G+ P+ C+ C F+ K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 28.6 bits (63), Expect = 0.62
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 432 HTGETPHRCEICKKAFTRKEHYVNHVMWHT 461
+G+ P C IC AFT K + H+ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 28.2 bits (62), Expect = 0.85
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHT 545
+G+ P C C FT K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 28.2 bits (62), Expect = 0.86
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHT 573
+G+ P C C +FT K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 27.8 bits (61), Expect = 1.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 684 HTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
+G+ P C CL FT K + HLK H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 27.4 bits (60), Expect = 1.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHT 601
+G P C C +FT K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 27.0 bits (59), Expect = 2.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 777 ERPFKCDVCPKDFTCKGHLVSHLRSHLN 804
+RPF C +C FT K + HL+ H +
Sbjct: 5 KRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 26.6 bits (58), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 488 HTNDTPFKCEICTKSFTRKEHFTNHIMWHT 517
+ PF C IC +FT K + H+ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 26.3 bits (57), Expect = 4.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 712 HAGETEHVCNICSKPFLKKEHLVNHSRSHT 741
+G+ VC IC F K + H + HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 32.1 bits (73), Expect = 0.044
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 540 HVRQHTGESPHK---CNY--CAKSFTRKEHLVNHVRQHTGD 575
+ ++ E P K C + C K+F R+ ++ +H++ H D
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 31.8 bits (72), Expect = 0.062
Identities = 7/31 (22%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 407 ETPYKCQY--CGKNFSRKEHMVNHVRKHTGE 435
+ ++C + C K F R+ ++ +H++ H +
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 31.4 bits (71), Expect = 0.090
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 471 CGKKYTRKEHLANHMRSHTND 491
C K + R+ ++ +H+++H D
Sbjct: 26 CTKTFKRRYNIRSHIQTHLED 46
Score = 31.4 bits (71), Expect = 0.093
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 770 KQNGEVLERPFKCDV--CPKDFTCKGHLVSHLRSHLNER 806
K E+ ++ F+C C K F + ++ SH+++HL +R
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 31.4 bits (71), Expect = 0.10
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 596 HVRQHTGETP---YQCQY--CPKAFSRKDHLVNHVRQHTGE 631
+ ++ E P ++C + C K F R+ ++ +H++ H +
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 30.6 bits (69), Expect = 0.19
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 652 HVRLHTGESPHK---CHF--CSKSFTRKEHLNNHIRLHTGE 687
+ + E P K C F C+K+F R+ ++ +HI+ H +
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 29.8 bits (67), Expect = 0.32
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 568 HVRQHTGDSPHK---CNY--CAKSFTRKEHLVNHVRQHTGE 603
+ ++ + P K C + C K+F R+ ++ +H++ H +
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 29.1 bits (65), Expect = 0.59
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 512 HIMWHTGETPHR---CDF--CSKTFTRKEHLLNHVRQHTGE 547
I + E P + C F C+KTF R+ ++ +H++ H +
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 28.7 bits (64), Expect = 0.80
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 624 HVRQHTGESPHK---CSY--CKQSFTRKDHLNNHVRLHTGE 659
+ ++ E P K C + C ++F R+ ++ +H++ H +
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 28.7 bits (64), Expect = 0.81
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 379 DRPYCCSV--CMKTFARKEHLENHTRCHTGE 407
D+ + C C KTF R+ ++ +H + H +
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 27.9 bits (62), Expect = 1.5
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 680 HIRLHTGESPHK---CDF--CLKTFTRKEHLTNHLKQHAGE 715
I + E P K C F C KTF R+ ++ +H++ H +
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 27.1 bits (60), Expect = 2.7
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 743 ERPFACT--DCGKSFPLKGNLLFHQRSH 768
++ F C C K+F + N+ H ++H
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 27.1 bits (60), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 491 DTPFKCEI--CTKSFTRKEHFTNHIMWHTGE 519
D F+C CTK+F R+ + +HI H +
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 31.7 bits (71), Expect = 0.055
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTG 406
RPY CSVC K F+ K +E H R HTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 29.8 bits (66), Expect = 0.25
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKHTG 434
PY C CGK FS K M H R HTG
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 27.5 bits (60), Expect = 1.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHT 489
P+ C VCGK+++ K + H R HT
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHT 27
Score = 26.7 bits (58), Expect = 2.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTG 686
P+ C C K F+ K + H R+HTG
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 3.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 744 RPFACTDCGKSFPLKGNLLFHQRSH 768
RP++C+ CGK F LK + H R H
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVH 26
Score = 25.9 bits (56), Expect = 4.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTG 658
P+ CS C + F+ K + H R+HTG
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTG 630
PY C C K FS K + H R HTG
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTG 574
P+ C+ C K F+ K + H R HTG
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQHTG 602
P+ C+ C K F+ K + H R HTG
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 324 KPFTCHVCGKAFDFQAELMSHGKCHLG 350
+P++C VCGK F + ++ +H + H G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 31.4 bits (71), Expect = 0.055
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 606 YQCQYCPKAFSRKDHLVNHVRQHTGESPHK 635
+ C CPK F R DHL H+ H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 30.3 bits (68), Expect = 0.14
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 467 VCQVCGKKYTRKEHLANHMRSHTND 491
C C K++ R +HL+ H+ H
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELL 28
Score = 28.7 bits (64), Expect = 0.67
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 664 CHFCSKSFTRKEHLNNHIRLHTGESPHK 691
C C K F R +HL+ HI LH +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 28.3 bits (63), Expect = 0.71
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 636 CSYCKQSFTRKDHLNNHVRLHTGESPHK 663
C C + F R DHL+ H+ LH +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 28.0 bits (62), Expect = 1.2
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 410 YKCQYCGKNFSRKEHMVNHVRKHTGETPHR 439
+ C C K F R +H+ H+ H R
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 28.0 bits (62), Expect = 1.3
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 552 CNYCAKSFTRKEHLVNHVRQHTGDSPHK 579
C C K F R +HL H+ H +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 27.6 bits (61), Expect = 1.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 494 FKCEICTKSFTRKEHFTNHIMWHTGETPHR 523
F C C K F R +H + HI H R
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 27.2 bits (60), Expect = 2.1
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 524 CDFCSKTFTRKEHLLNHVRQHTGESPHK 551
C C K F R +HL H+ H +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 26.8 bits (59), Expect = 2.5
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 382 YCCSVCMKTFARKEHLENHTRCHTGETPYK 411
+ C C K F R +HL H H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 26.8 bits (59), Expect = 2.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 580 CNYCAKSFTRKEHLVNHVRQHTG 602
C C K F R +HL H+ H
Sbjct: 5 CPECPKRFMRSDHLSKHITLHEL 27
Score = 26.8 bits (59), Expect = 3.0
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 719 VCNICSKPFLKKEHLVNHSRSHTGERP 745
C C K F++ +HL H H
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 26.8 bits (59), Expect = 3.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 692 CDFCLKTFTRKEHLTNHLKQH 712
C C K F R +HL+ H+ H
Sbjct: 5 CPECPKRFMRSDHLSKHITLH 25
Score = 26.4 bits (58), Expect = 3.5
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 780 FKCDVCPKDFTCKGHLVSHLRSHLNERP 807
F C CPK F HL H+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.7 bits (71), Expect = 0.062
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 664 CHFCSKSFTRKEHLNNHIRLHTGE 687
C +C+K F K L H+R+HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 31.4 bits (70), Expect = 0.084
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 606 YQCQYCPKAFSRKDHLVNHVRQHTGE 631
+ C+YC K F K L H+R HT E
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 30.2 bits (67), Expect = 0.16
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 580 CNYCAKSFTRKEHLVNHVRQHTGE 603
C YC K F K L H+R HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 30.2 bits (67), Expect = 0.17
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 410 YKCQYCGKNFSRKEHMVNHVRKHTGE 435
+ C+YC K F K + H+R HT E
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 30.2 bits (67), Expect = 0.20
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 524 CDFCSKTFTRKEHLLNHVRQHTGE 547
C++C+K F K L H+R HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 30.2 bits (67), Expect = 0.22
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 636 CSYCKQSFTRKDHLNNHVRLHTGE 659
C YC + F K L H+R+HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 29.0 bits (64), Expect = 0.45
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 552 CNYCAKSFTRKEHLVNHVRQHTGD 575
C YC K F K L H+R HT +
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 28.7 bits (63), Expect = 0.76
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 487 SHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
S ++ F CE C K F K H+ HT E
Sbjct: 3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 27.5 bits (60), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 382 YCCSVCMKTFARKEHLENHTRCHTGE 407
+ C C K F K L+ H R HT E
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 27.1 bits (59), Expect = 2.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 692 CDFCLKTFTRKEHLTNHLKQHAGE 715
C++C K F K L HL+ H E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 26.7 bits (58), Expect = 3.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 780 FKCDVCPKDFTCKGHLVSHLRSHLNER 806
F C+ C K F K L +HLR H NE+
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.4 bits (57), Expect = 4.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 299 TCDLCGKFFPYRYQMIVHRRYHTERK 324
TC+ C K F +++ + H R HT K
Sbjct: 11 TCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.0 bits (56), Expect = 5.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 720 CNICSKPFLKKEHLVNHSRSHTGER 744
C C+K F K L H R HT E+
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 25.6 bits (55), Expect = 8.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 440 CEICKKAFTRKEHYVNHVMWHTGE 463
CE C K F K H+ HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 25.6 bits (55), Expect = 8.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 468 CQVCGKKYTRKEHLANHMRSHTND 491
C+ C K + K L H+R HTN+
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 31.8 bits (71), Expect = 0.069
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 406 GETPYKCQYCGKNFSRKEHMVNHVRKHTGET 436
+T +CQ CGK F ++ H H GE+
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 31.4 bits (70), Expect = 0.086
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 602 GETPYQCQYCPKAFSRKDHLVNHVRQHTGES 632
+T +CQ C K F L+ H H GES
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 28.3 bits (62), Expect = 1.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 518 GETPHRCDFCSKTFTRKEHLLNHVRQHTGES 548
+T C C K F L+ H H GES
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 27.6 bits (60), Expect = 2.4
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 574 GDSPHKCNYCAKSFTRKEHLVNHVRQHTGET 604
+ +C C K F L+ H H GE+
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 27.2 bits (59), Expect = 2.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 546 GESPHKCNYCAKSFTRKEHLVNHVRQHTGDS 576
++ +C C K F L+ H H G+S
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 27.2 bits (59), Expect = 2.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 658 GESPHKCHFCSKSFTRKEHLNNHIRLHTGES 688
++ +C C K F L H LH GES
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 26.8 bits (58), Expect = 4.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 434 GETPHRCEICKKAFTRKEHYVNHVMWHTGET 464
+T C+ C K F + H H GE+
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 26.0 bits (56), Expect = 8.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 630 GESPHKCSYCKQSFTRKDHLNNHVRLHTGES 660
++ +C C + F L H LH GES
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 26.0 bits (56), Expect = 8.2
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 492 TPFKCEICTKSFTRKEHFTNHIMWHTGET 520
T +C+ C K F H H GE+
Sbjct: 11 TTSECQECGKIFRHSSLLIEHQALHAGES 39
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 31.0 bits (70), Expect = 0.090
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 606 YQCQYCPKAFSRKDHLVNHVRQHTGE 631
+ C CPK F R DHL H+ H +
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENK 28
Score = 30.6 bits (69), Expect = 0.095
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 467 VCQVCGKKYTRKEHLANHMRSHTND 491
C C K++ R +HL H+ H N
Sbjct: 4 ACPECPKRFMRSDHLTLHILLHENK 28
Score = 27.9 bits (62), Expect = 1.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 780 FKCDVCPKDFTCKGHLVSHLRSHLNER 806
F C CPK F HL H+ H N++
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.6 bits (61), Expect = 1.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 636 CSYCKQSFTRKDHLNNHVRLHTGE 659
C C + F R DHL H+ LH +
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
Score = 27.6 bits (61), Expect = 1.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 664 CHFCSKSFTRKEHLNNHIRLHTGE 687
C C K F R +HL HI LH +
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
Score = 26.8 bits (59), Expect = 2.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 410 YKCQYCGKNFSRKEHMVNHVRKHTGE 435
+ C C K F R +H+ H+ H +
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENK 28
Score = 26.8 bits (59), Expect = 2.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 382 YCCSVCMKTFARKEHLENHTRCHTGE 407
+ C C K F R +HL H H +
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENK 28
Score = 26.8 bits (59), Expect = 3.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 692 CDFCLKTFTRKEHLTNHLKQHAGE 715
C C K F R +HLT H+ H +
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
Score = 26.4 bits (58), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 580 CNYCAKSFTRKEHLVNHVRQHTGE 603
C C K F R +HL H+ H +
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
Score = 26.4 bits (58), Expect = 3.2
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 719 VCNICSKPFLKKEHLVNHSRSHTGER 744
C C K F++ +HL H H ++
Sbjct: 4 ACPECPKRFMRSDHLTLHILLHENKK 29
Score = 26.4 bits (58), Expect = 3.2
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 552 CNYCAKSFTRKEHLVNHVRQHTGD 575
C C K F R +HL H+ H
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
Score = 26.4 bits (58), Expect = 3.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 494 FKCEICTKSFTRKEHFTNHIMWHTGE 519
F C C K F R +H T HI+ H +
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENK 28
Score = 26.0 bits (57), Expect = 4.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 524 CDFCSKTFTRKEHLLNHVRQHTGE 547
C C K F R +HL H+ H +
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB:
1dx1_A 1qlx_A 1qlz_A
Length = 219
Score = 34.0 bits (77), Expect = 0.13
Identities = 16/126 (12%), Positives = 24/126 (19%), Gaps = 9/126 (7%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATS 83
+ P G G + P Q G P
Sbjct: 2 SKKRPKPGGGWNTGGSRYPGQGSPGGNRYPPQGGGGWGQP------HGGGWGQPHGGGWG 55
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGG 143
P + Q G G + +K P ++ + G
Sbjct: 56 QPHGGGWGQPHGGGWG---QPHGGGGWGQGGTHGQWNKPSKPKTNMKHVAGAAAAGAVVG 112
Query: 144 GSNGQT 149
G G
Sbjct: 113 GLGGYM 118
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 34.4 bits (78), Expect = 0.13
Identities = 7/54 (12%), Positives = 13/54 (24%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
R + MK H GE + + + E + +
Sbjct: 179 RVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
Score = 34.0 bits (77), Expect = 0.13
Identities = 15/139 (10%), Positives = 36/139 (25%), Gaps = 9/139 (6%)
Query: 493 PFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
P++ +I + ++ W + +R + K + + +V +
Sbjct: 101 PYEGQI-----STQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVV--ISREEREQ 153
Query: 553 NYCAKSFTRKEHLVNHVRQHTGD--SPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQY 610
N A + + + G+ K H GE Q +
Sbjct: 154 NLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREK 213
Query: 611 CPKAFSRKDHLVNHVRQHT 629
+ + L +
Sbjct: 214 SEQVLDNPEDLRGPIHLSV 232
Score = 33.3 bits (75), Expect = 0.25
Identities = 8/45 (17%), Positives = 11/45 (24%)
Query: 641 QSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHT 685
+ H L GE + + E L I L
Sbjct: 188 KRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
Score = 31.7 bits (71), Expect = 0.79
Identities = 7/49 (14%), Positives = 11/49 (22%)
Query: 664 CHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQH 712
K H L GE + + + E L +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 30.9 bits (69), Expect = 1.3
Identities = 9/62 (14%), Positives = 13/62 (20%), Gaps = 7/62 (11%)
Query: 692 CDFCLKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDC 751
+ +K T H GE + E L +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH-------LSVLRQ 235
Query: 752 GK 753
GK
Sbjct: 236 GK 237
Score = 30.6 bits (68), Expect = 1.9
Identities = 7/50 (14%), Positives = 12/50 (24%)
Query: 608 CQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHT 657
+ K H GE + +Q + L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
Score = 30.2 bits (67), Expect = 2.8
Identities = 7/45 (15%), Positives = 11/45 (24%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSH 344
+ K Q +HR K + D +L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP 227
Score = 28.6 bits (63), Expect = 7.6
Identities = 5/50 (10%), Positives = 10/50 (20%)
Query: 468 CQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHT 517
+ K+ H + + E + E I
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 30.6 bits (68), Expect = 0.15
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKHTGE 435
PYKC C + K ++ H+RKHTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 29.8 bits (66), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQHTGE 631
PY+C C A + K +L H+R+HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 29.0 bits (64), Expect = 0.50
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGE 659
P+KC C + K +LN H+R HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 29.0 bits (64), Expect = 0.55
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 573 TGDSPHKCNYCAKSFTRKEHLVNHVRQHTGE 603
+ P+KC C+ + K +L H+R+HTGE
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 28.6 bits (63), Expect = 0.59
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIRLHTGE 687
P+KC CS + K +LN H+R HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 27.9 bits (61), Expect = 1.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGD 575
P+KC C+ + K +L H+R+HTG+
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 27.9 bits (61), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQHTGE 547
P++C CS K +L H+R+HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 26.7 bits (58), Expect = 3.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 380 RPYCCSVCMKTFARKEHLENHTRCHTGE 407
+PY C C A K +L H R HTGE
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 26.7 bits (58), Expect = 3.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 778 RPFKCDVCPKDFTCKGHLVSHLRSHLNER 806
+P+KC C K +L HLR H E+
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 25.9 bits (56), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 689 PHKCDFCLKTFTRKEHLTNHLKQHAGE 715
P+KC C K +L HL++H GE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 25.9 bits (56), Expect = 7.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 487 SHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGE 519
S ++ P+KC C+ + K + H+ HTGE
Sbjct: 3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE 35
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 30.1 bits (67), Expect = 0.17
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 465 PHVCQVCGKKYTRKEHLANHMRSH 488
P+VC+ CGK++ + LANH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 28.1 bits (62), Expect = 0.80
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRKH 432
PY C+ CGK F + + NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 26.2 bits (57), Expect = 3.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQH 628
PY C+ C K F + L NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 26.2 bits (57), Expect = 4.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQH 544
P+ C+ C K F + L NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 26.2 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQH 572
P+ C C K F + L NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 26.2 bits (57), Expect = 4.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 577 PHKCNYCAKSFTRKEHLVNHVRQH 600
P+ C C K F + L NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal
subunit, ribosomal protein/RNA complex; 8.70A {Canis
familiaris}
Length = 266
Score = 33.8 bits (76), Expect = 0.20
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 758 KGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSF 817
N LF +R G+ + K D+ + + R+ L +R V P ++
Sbjct: 27 VVNPLFEKRPKNFGIGQDI--QPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFT 84
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 31.8 bits (71), Expect = 0.21
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 366 EESLQRHTKRH-SIDRPYCCSVCMKTFAR-KEHLENHTRCHTGETPYKCQYCGKNFSRKE 423
EE S+ P C +V KT K+H+EN + + C +CGK
Sbjct: 22 EEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-----KQEMFTCHHCGKQLRSLA 76
Query: 424 HMVNHVRKHTGETP 437
M HV + P
Sbjct: 77 GMKYHVMANHNSLP 90
Score = 27.1 bits (59), Expect = 9.6
Identities = 10/59 (16%), Positives = 20/59 (33%)
Query: 439 RCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCE 497
C C+ + + M + + C CGK+ + H+ ++ N P
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS 94
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor,
chromophore, glycoprotein, lipoprotein, membrane,
palmitate phosphorylation; HET: BOG RET PLM TWT PC1;
2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Length = 448
Score = 33.7 bits (77), Expect = 0.25
Identities = 13/75 (17%), Positives = 20/75 (26%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
P++ + + + PP G P Q P G+
Sbjct: 364 PSADAAQMKEMMAMMQKMQQQQAAYPPQGYAPPPQGYPPQGYPPQGYPPQGYPPQGYPPP 423
Query: 71 PHQMPPPSPIATSPP 85
P PP +PP
Sbjct: 424 PQGAPPQGAPPAAPP 438
Score = 31.4 bits (71), Expect = 1.4
Identities = 16/135 (11%), Positives = 26/135 (19%), Gaps = 11/135 (8%)
Query: 4 QCELSQFPASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHH 63
+ FP + +T + + S Q
Sbjct: 324 EAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQ 383
Query: 64 TLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIP 123
+ PPP PP PPP +
Sbjct: 384 QQAAYPPQGYAPPPQGYPPQGYPPQGYPPQGYPPQG-----------YPPPPQGAPPQGA 432
Query: 124 SPSSSSPSSSSQLMQ 138
P++ +Q Q
Sbjct: 433 PPAAPPQGVDNQAYQ 447
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 30.7 bits (69), Expect = 0.26
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 367 ESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMV 426
H + R C C + + E+ C G C CG+N K+ +
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYC--GARTELCGNCGRNVLVKD-LK 59
Query: 427 NHVRKHTGET 436
H E
Sbjct: 60 THPEVCGREG 69
Score = 30.7 bits (69), Expect = 0.34
Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Query: 619 DHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLN 678
H C +C + L H + G C C ++ K+ L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVKD-LK 59
Query: 679 NHIRLHTGES 688
H + E
Sbjct: 60 THPEVCGREG 69
Score = 29.2 bits (65), Expect = 1.1
Identities = 15/70 (21%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Query: 591 EHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLN 650
H CQ+C S L H + G C C ++ KD L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVKD-LK 59
Query: 651 NHVRLHTGES 660
H + E
Sbjct: 60 THPEVCGREG 69
Score = 28.4 bits (63), Expect = 2.2
Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 3/71 (4%)
Query: 647 DHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLT 706
+ H C C + + L H + G C C + K+ L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVKD-LK 59
Query: 707 NHLKQHAGETE 717
H + E
Sbjct: 60 THPEVCGREGS 70
Score = 27.6 bits (61), Expect = 3.4
Identities = 11/66 (16%), Positives = 18/66 (27%), Gaps = 3/66 (4%)
Query: 423 EHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLA 482
H C+ C + + H + G +C CG+ K+ L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHED-YCGARTELCGNCGRNVLVKD-LK 59
Query: 483 NHMRSH 488
H
Sbjct: 60 THPEVC 65
Score = 26.9 bits (59), Expect = 7.8
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 703 EHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLL 762
+ H + VC C + L H + G R C +CG++ +K +L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVK-DLK 59
Query: 763 FHQRSHRKQN 772
H ++
Sbjct: 60 THPEVCGREG 69
>1th1_C APC protein, adenomatous polyposis coli protein; protein-protein
complex, cell adhesion/antitumor protein complex; HET:
TPO SEP; 2.50A {Homo sapiens}
Length = 179
Score = 32.7 bits (73), Expect = 0.30
Identities = 22/117 (18%), Positives = 32/117 (27%), Gaps = 17/117 (14%)
Query: 18 TSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPP 77
+S++ +SS SEP S G+ SPS SP Q PP
Sbjct: 30 SSLDSFESRSIASSVQSEPCSGMVSGI------ISPSDLP-----------DSPGQTMPP 72
Query: 78 SPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSS 134
S T PPPP + + + + +
Sbjct: 73 SRSKTPPPPPQTAQTKREVPKNKAPTAEKRESGPKQAAVNAAVQRVQVLPDADTLLH 129
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.8 bits (66), Expect = 0.30
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
E +KC C K FS +++ H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 29.8 bits (66), Expect = 0.33
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 773 GEVLERPFKCDVCPKDFTCKGHLVSHLRSH 802
E+ FKC+ C K F+C +L H R H
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 29.8 bits (66), Expect = 0.33
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 544 HTGESPHKCNYCAKSFTRKEHLVNHVRQHT 573
E KCN C K+F+ ++L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 29.0 bits (64), Expect = 0.59
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHT 685
E KC+ C K+F+ ++L H R+HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 29.0 bits (64), Expect = 0.68
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHT 545
E +C+ C KTF+ ++L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.6 bits (63), Expect = 0.85
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 684 HTGESPHKCDFCLKTFTRKEHLTNHLKQHA 713
E KC+ C KTF+ ++LT H + H
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.6 bits (63), Expect = 0.86
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 572 HTGDSPHKCNYCAKSFTRKEHLVNHVRQHT 601
+ KCN C K+F+ ++L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.6 bits (63), Expect = 0.87
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 600 HTGETPYQCQYCPKAFSRKDHLVNHVRQHT 629
E ++C C K FS +L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.3 bits (62), Expect = 1.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 739 SHTGERPFACTDCGKSFPLKGNLLFHQRSHRK 770
S E+ F C C K+F L H+R H +
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTR 37
Score = 28.3 bits (62), Expect = 1.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 628 HTGESPHKCSYCKQSFTRKDHLNNHVRLHT 657
E KC+ C+++F+ +L H R+HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 26.3 bits (57), Expect = 5.4
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 460 HTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
E C C K ++ ++L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 26.3 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 487 SHTNDTPFKCEICTKSFTRKEHFTNHIMWHT 517
S + FKC C K+F+ ++ T H HT
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 30.6 bits (69), Expect = 0.33
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 719 VCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFP 756
CN C + +KK + H + +C DCGK F
Sbjct: 12 TCNACGES-VKKIQVEKHVSNCRNCECLSCIDCGKDFW 48
Score = 26.8 bits (59), Expect = 8.9
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 354 YTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQ 413
+TC C + +++H C C K F ++ ++H +C + +
Sbjct: 11 FTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWGDDY-KSHVKCISEGQ----K 64
Query: 414 YCGKNFSRKE 423
Y GK + K
Sbjct: 65 YGGKGYEAKS 74
Score = 26.8 bits (59), Expect = 9.8
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Query: 384 CSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHT 433
C+ C ++ +K +E H C CGK+F + + H
Sbjct: 13 CNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWGDD-----YKSHV 56
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 402
Score = 33.3 bits (75), Expect = 0.36
Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 14/109 (12%)
Query: 608 CQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFC 667
+Y F + L++ K F + L + C FC
Sbjct: 250 SKYVETFFFKSYALLDAAAVENL--------IKSDFEHSYCRGS---LRSEAKGIYCPFC 298
Query: 668 SKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEHLTNHLKQHAGET 716
S+ F +H+ G+ K + + F E+ + ++ +
Sbjct: 299 SRWFKTSSVFESHL---VGKIHKKNESKRRNFVYSEYKLHRYLKYLNDE 344
Score = 31.4 bits (70), Expect = 1.5
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 10/62 (16%)
Query: 493 PFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHL-------LNHVRQHT 545
C C++ F F +H+ G+ + + + F E+ LN T
Sbjct: 292 GIYCPFCSRWFKTSSVFESHL---VGKIHKKNESKRRNFVYSEYKLHRYLKYLNDEFSRT 348
Query: 546 GE 547
Sbjct: 349 RS 350
Score = 28.7 bits (63), Expect = 8.9
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 407 ETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYV 454
C +C + F +H+ G+ + E ++ F E+ +
Sbjct: 290 AKGIYCPFCSRWFKTSSVFESHL---VGKIHKKNESKRRNFVYSEYKL 334
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 33.5 bits (76), Expect = 0.39
Identities = 40/321 (12%), Positives = 73/321 (22%), Gaps = 38/321 (11%)
Query: 376 HSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
+P CS C + + G+ ++CQ C V H R H
Sbjct: 43 RFFKQPTFCSHC------TDFI-----WGFGKQGFQCQVCS--------FVVHKRCHE-F 82
Query: 436 TPHRCEICKKAFTRKEHYVNHV-MWHTGETPHVCQVCG------KKYTRKEH---LANHM 485
C K + H HT +P C CG K + H
Sbjct: 83 VTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHK 142
Query: 486 RSHTNDTPFKCEICTKSFTRKEHFT-------NHIMWHTGETPHRCDFCSKTFTRKEHLL 538
R N P C + + ++ + D + + L
Sbjct: 143 RCVMN-VPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKL 201
Query: 539 NHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVR 598
+ + K + + E +++ D T + + +
Sbjct: 202 IPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLS 261
Query: 599 QHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTG 658
E ++ E +Q F R
Sbjct: 262 FGISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEK 321
Query: 659 ESPHKCHFCSKSFTRKEHLNN 679
+ F + + L +
Sbjct: 322 TANTISKFDNNGNRDRMKLTD 342
>2vxp_A Transforming growth factor-beta-induced protein IG-H3;
RGD-containing collagen-associated protein, FAS1, BIGH3,
vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens}
PDB: 1x3b_A
Length = 132
Score = 31.5 bits (72), Expect = 0.43
Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 15/76 (19%)
Query: 214 NPDEFNQLLAYHEVFGKLQSSVVTHTSSTLGLASTSTAQGDMNSAADNGVSGTNSVITNN 273
+ E +L YH L S + L + QGD VS N+V++
Sbjct: 60 DAKELANILKYHIGDEILVSGGIG------ALVRLKSLQGDKLE-----VSLKNNVVSV- 107
Query: 274 STENNTTSITLDIKAD 289
N DI A
Sbjct: 108 ---NKEPVAEPDIMAT 120
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 33.1 bits (75), Expect = 0.45
Identities = 20/155 (12%), Positives = 44/155 (28%), Gaps = 5/155 (3%)
Query: 66 TSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHIS----- 120
+ P + + + PP +D+ + + ++PPP + +
Sbjct: 300 IASAPPRAVGHGAGPSGLAPPALQNDRQSGVDEGRTSGWSSMDRRRAPPPIASVGTLAKQ 359
Query: 121 KIPSPSSSSPSSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHCIQQDDTQHSTVQ 180
K P + +S S + G S+G + + + P + T S
Sbjct: 360 KAPVGNDASFSKEPVISASNFLGRSSGSSRRPAVSSSRDVMPIDTSEPSRTRATDASPGA 419
Query: 181 SPPGQQQQYQQMDTSQSSQQQSDLIKTNGTGDVNP 215
Q S + S ++ +
Sbjct: 420 FRRTSGPQKSSPVNSAEPKHSSSARHSSNVKNYES 454
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 28.9 bits (64), Expect = 0.50
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 606 YQCQYCPKAFSRKDHLVNHVR 626
+ C CPK F R D L H++
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 27.0 bits (59), Expect = 2.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 468 CQVCGKKYTRKEHLANHMRS 487
C C K++ R + L+ H+++
Sbjct: 5 CPACPKRFMRSDALSKHIKT 24
Score = 26.6 bits (58), Expect = 3.5
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 494 FKCEICTKSFTRKEHFTNHI 513
F C C K F R + + HI
Sbjct: 3 FACPACPKRFMRSDALSKHI 22
>3ov0_A Cytochrome C family protein; multiheme cytochrome C, electron
transfer, Fe reduction, GEO sulfurreducens; HET: HEM;
3.20A {Geobacter sulfurreducens}
Length = 318
Score = 32.3 bits (71), Expect = 0.59
Identities = 37/279 (13%), Positives = 62/279 (22%), Gaps = 9/279 (3%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGE 463
H + C+ C E C C K V
Sbjct: 23 HLKKYNNNCRICHIALFDLRK-PKRYTMLDMEKGKSCGACHTGM--KAFSVADDSQCVRC 79
Query: 464 TPHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHR 523
+ + H KC C + R+ ++ E
Sbjct: 80 HSGSARPVAYRMKGAGEAVFSHEVHVPMLEGKCRTCHSN--REITGGRNVTMAQMEKGKS 137
Query: 524 CDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYC 583
C C N + H G +P K +F K +KCN C
Sbjct: 138 CGACHNDKMAFTVAGNCGKCHKGMTPPK----TVNFKMKGVADAAFSHEFHLGMYKCNEC 193
Query: 584 AKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSF 643
+ + C C + + H G P K +Y
Sbjct: 194 HTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTYKTSVG 253
Query: 644 TRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIR 682
+ H+ + H F + + + + +
Sbjct: 254 EAYFDHDIHLSMFKCADCHTKVFKYRKGSAPATMADMEK 292
Score = 32.3 bits (71), Expect = 0.68
Identities = 35/251 (13%), Positives = 52/251 (20%), Gaps = 9/251 (3%)
Query: 516 HTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGD 575
H + + C C E C C K V Q
Sbjct: 23 HLKKYNNNCRICHIALFDLRKP-KRYTMLDMEKGKSCGACHTGM--KAFSVADDSQCVRC 79
Query: 576 SPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHK 635
A V H +C+ C +V E
Sbjct: 80 HSGSARPVAYRMKGAGEAVFSHEVHVPMLEGKCRTCHSNREITGG--RNVTMAQMEKGKS 137
Query: 636 CSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFC 695
C C N + H G +P K +F K + +KC+ C
Sbjct: 138 CGACHNDKMAFTVAGNCGKCHKGMTPPKT----VNFKMKGVADAAFSHEFHLGMYKCNEC 193
Query: 696 LKTFTRKEHLTNHLKQHAGETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSF 755
+ + C C + + H G +P T
Sbjct: 194 HTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTYKTSVG 253
Query: 756 PLKGNLLFHQR 766
+ H
Sbjct: 254 EAYFDHDIHLS 264
Score = 31.2 bits (68), Expect = 1.3
Identities = 32/262 (12%), Positives = 55/262 (20%), Gaps = 11/262 (4%)
Query: 430 RKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHMRSHT 489
H + + C IC A + M E C C K
Sbjct: 21 DIHLKKYNNNCRICHIALFDLRKPKRYTM-LDMEKGKSCGACHTGM--KAFSVADDSQCV 77
Query: 490 NDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRCDFC-SKTFTRKEHLLNHVRQHTGES 548
H +C C S + + G+S
Sbjct: 78 RCHSGSARPVAYRMKGAGEAVFSHEVHVPMLEGKCRTCHSNREITGGRNVTMAQMEKGKS 137
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPYQC 608
C+ +FT + + T + H + Y+C
Sbjct: 138 CGACHNDKMAFTVAGNCGKCHKGMTPPKTVNFKMKGVADAAFSHEFHL-------GMYKC 190
Query: 609 QYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCS 668
C + C C ++ + H G P K + +
Sbjct: 191 NECHTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTYKT 250
Query: 669 KSFTRKEHLNNHIRLHTGESPH 690
+ H+ + H
Sbjct: 251 SVGEAYFDHDIHLSMFKCADCH 272
Score = 31.2 bits (68), Expect = 1.6
Identities = 34/295 (11%), Positives = 63/295 (21%), Gaps = 17/295 (5%)
Query: 346 KCHLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHT 405
HL C +C H+ + + +++ C C K
Sbjct: 21 DIHLKKYNNNCRIC-HIALFDLRKPKRYTMLDMEKGKSCGACHT--GMKAFSVADDSQCV 77
Query: 406 GETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEIC-KKAFTRKEHYVNHVMWHTGET 464
+ V H +C C V G++
Sbjct: 78 RCHSGSARPVAYRMKGAGEAVFSHEVHVPMLEGKCRTCHSNREITGGRNVTMAQMEKGKS 137
Query: 465 PHVCQVCGKKYTRKEHLANHMRSHTNDTPFKCEICTKSFTRKEHFTNHIMWHTGETPHRC 524
C +T + + T ++ + H + M ++C
Sbjct: 138 CGACHNDKMAFTVAGNCGKCHKGMTPPKTVNFKMKGVADAAFSHEFHLGM-------YKC 190
Query: 525 DFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCA 584
+ C + + C C + + H G P K Y
Sbjct: 191 NECHTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTYKT 250
Query: 585 KSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYC 639
H+ ++C C + E C C
Sbjct: 251 SVGEAYFDHDIHLSM------FKCADCHTKVFKYRKGSAPATMADMEKGKSCGVC 299
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain,
PRMT3, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: g.37.1.5
Length = 121
Score = 30.7 bits (69), Expect = 0.68
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 17/83 (20%)
Query: 658 GESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHKCDFCLKTFTRKEH---------LTNH 708
G C FC + F E +H +L H+ + +H L N
Sbjct: 12 GRQHTPCLFCDRLFASAEETFSHCKLE-----HQFNID---SMVHKHGLEFYGYIKLINF 63
Query: 709 LKQHAGETEHVCNICSKPFLKKE 731
++ E++ +I + +K+
Sbjct: 64 IRLKNPTVEYMNSIYNPVPWEKD 86
Score = 29.2 bits (65), Expect = 2.5
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 17/79 (21%)
Query: 518 GETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEH---------LVNH 568
G C FC + F E +H + H+ N + +H L+N
Sbjct: 12 GRQHTPCLFCDRLFASAEETFSHCKLE-----HQFNIDS---MVHKHGLEFYGYIKLINF 63
Query: 569 VRQHTGDSPHKCNYCAKSF 587
+R + +
Sbjct: 64 IRLKNPTVEYMNSIYNPVP 82
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 28.3 bits (63), Expect = 0.72
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 605 PYQCQYCPKAFSRKDHLVNHVRQ-HTG 630
Y C C +AF+R+D L+ H ++ H+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 27.9 bits (62), Expect = 1.1
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 409 PYKCQYCGKNFSRKEHMVNHVRK-HTG 434
Y C C + F+R++ ++ H +K H+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 27.1 bits (60), Expect = 2.0
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 380 RPYCCSVCMKTFARKEHLENHTR-CHTG 406
+ Y C +C + F R++ L H + H+G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 27.1 bits (60), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVR-LHTG 658
+ C C ++FTR+D L H + +H+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.7 bits (59), Expect = 2.9
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 661 PHKCHFCSKSFTRKEHLNNHIR-LHTG 686
+ C C+++FTR++ L H + +H+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.0 bits (57), Expect = 5.3
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 521 PHRCDFCSKTFTRKEHLLNHVRQ-HTG 546
+ C C++ FTR++ L+ H ++ H+G
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 25.6 bits (56), Expect = 6.6
Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 549 PHKCNYCAKSFTRKEHLVNHVRQ-HTGD 575
+ C C ++FTR++ L+ H ++ H+G+
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29
Score = 25.2 bits (55), Expect = 9.2
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 806 RPHVCPHCSKSFVEHTCMIKHIRKNH 831
+ + C C+++F +I+H +K H
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIH 26
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR
complex function; HET: ADP; 2.31A {Pyrococcus furiosus}
PDB: 3ur3_C 4doz_A
Length = 693
Score = 32.4 bits (72), Expect = 0.76
Identities = 11/99 (11%), Positives = 26/99 (26%), Gaps = 2/99 (2%)
Query: 389 KTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKK--A 446
K E EN + ++ K +C +C + A
Sbjct: 219 KWLKFAEKKENSRVLERIAIYPLLVKILDSLGERKVTEERFEKSEQLKGWKCHVCGENLA 278
Query: 447 FTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKEHLANHM 485
+ +++ + +C +C K + +
Sbjct: 279 IFGDMYDHDNLKSLWLDEEPLCPMCLIKRYYPVWIRSKT 317
>3q2s_C Cleavage and polyadenylation specificity factor S; CFIM, CFIM25,
CFIM68, CPSF5, CPSF6, CPSF, 3' END processing,
processing, cleavage factor; 2.90A {Homo sapiens} PDB:
3q2t_C
Length = 229
Score = 31.6 bits (71), Expect = 0.77
Identities = 13/94 (13%), Positives = 23/94 (24%), Gaps = 10/94 (10%)
Query: 11 PASHKTSTSMEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTS 70
P + + + E+ + S + S G S + +
Sbjct: 146 PVNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAV-----P 200
Query: 71 PHQMPPPSPIATSPPPPSASDKHDSQSSPHITQH 104
P PPPP + + H H
Sbjct: 201 GGDRFPGPAGPGGPPPPFP-----AGQTHHHHHH 229
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI,
protein structure initiative, center for eukaryotic
structural genomics, CESG; NMR {Homo sapiens} SCOP:
g.37.1.4
Length = 124
Score = 30.4 bits (68), Expect = 0.86
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 285 DIKADLDLPVMGNHTCDLCGKFFPYRYQMIVHRR 318
+ + D DLP G H C C ++F + H R
Sbjct: 38 NAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFR 71
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.9 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 463 ETPHVCQVCGKKYTRKEHLANHMRSHTND 491
H+C +CGKK+ K L +H HT D
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE]
hydrogenase maturation, zinc-finger, nickel binding,
metal-binding; HET: FME; 2.30A {Pyrococcus
kodakaraensis} PDB: 3a44_A*
Length = 139
Score = 30.4 bits (68), Expect = 1.2
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 3/49 (6%)
Query: 748 CTDCGKSFPLKGNLLFHQRSHRKQNGEVLERPFKCDVCPKDFTCKGHLV 796
C +C + LK ++ + E CPK C H
Sbjct: 73 CRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPK---CGSHDF 118
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell
projection, disease mutation, membrane, phosphoprotein,
polymorphism; NMR {Homo sapiens}
Length = 216
Score = 30.9 bits (69), Expect = 1.3
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 2/86 (2%)
Query: 50 STSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGI 109
+ P P + + + + + + P S S +S + P
Sbjct: 106 QEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRS--ASSDTSEELNSQDSPPK 163
Query: 110 FQSPPPTSHISKIPSPSSSSPSSSSQ 135
S P+S S P + + ++
Sbjct: 164 QDSTAPSSTSSSDPILDFNISLAMAK 189
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA
repair, ring finger domain, metal binding, DNA
replication; 1.75A {Homo sapiens}
Length = 124
Score = 29.9 bits (67), Expect = 1.5
Identities = 15/71 (21%), Positives = 20/71 (28%), Gaps = 13/71 (18%)
Query: 774 EVLERPFKCDVCPKDFT------CKGHLVSH--LRSHLNERPHVCPHCSKSFVEHTCMIK 825
+E F+C C + C H V L + CP C M
Sbjct: 47 SKVEETFQCICCQELVFRPITTVC-QHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAM-- 103
Query: 826 HIRKNHTLANV 836
+ N L V
Sbjct: 104 --QVNQPLQTV 112
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone,
triacylglycerol hydrolase, all alpha helix protein, A/B
hydrolase fold; 1.85A {Burkholderia glumae} SCOP:
a.137.15.1
Length = 332
Score = 31.3 bits (70), Expect = 1.5
Identities = 18/84 (21%), Positives = 24/84 (28%), Gaps = 8/84 (9%)
Query: 59 QHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSH 118
H HH +S H P A SP P A + P P
Sbjct: 2 HHHHHHHHHHSSGHIEGRHMPAAPSPAPAGAVAGGPAAGVPAAASGAAEAAMPLPA---- 57
Query: 119 ISKIPSPSSSSPSSSSQLMQQGGG 142
P + + S + +L GG
Sbjct: 58 ----ALPGALAGSHAPRLPLAAGG 77
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 27.3 bits (60), Expect = 1.8
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 379 DRPYCCSV--CMKTFARKEHLENHTRCHTGET 408
DRPY C C K F R L H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 26.9 bits (59), Expect = 3.0
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 687 ESPHKCDF--CLKTFTRKEHLTNHLKQHAGET 716
+ P+ CD C K F R L H K H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 26.5 bits (58), Expect = 3.1
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 603 ETPYQCQY--CPKAFSRKDHLVNHVRQHTGES 632
+ PY C + C KAF R L+ H + H ++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 26.5 bits (58), Expect = 3.8
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 519 ETPHRCDF--CSKTFTRKEHLLNHVRQHTGES 548
+ P+ CD C K F R L+ H + H ++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 26.1 bits (57), Expect = 5.3
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 575 DSPHKCNY--CAKSFTRKEHLVNHVRQHTGET 604
D P+ C++ C K+F R L+ H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 25.4 bits (55), Expect = 7.9
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 407 ETPYKCQY--CGKNFSRKEHMVNHVRKHTGET 436
+ PY C + C K F R ++ H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
>2b5l_C Nonstructural protein V; DDB1, SV5-V, beta propeller, propeller
cluster, zinc finger, protein binding/viral protein
complex; 2.85A {Simian virus 5} PDB: 2hye_B*
Length = 222
Score = 30.7 bits (68), Expect = 1.8
Identities = 21/145 (14%), Positives = 35/145 (24%), Gaps = 14/145 (9%)
Query: 27 PPSSSRGSEPPSPNTGGVSG-----GFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIA 81
SS + P TG ++ ST+ + S G +P
Sbjct: 34 GTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAIVPADDKTV 93
Query: 82 TSPPPPSASDKHDSQSSPHITQHTGP---------GIFQSPPPTSHISKIPSPSSSSPSS 132
P P+ DS S G+ + ++
Sbjct: 94 PGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPI 153
Query: 133 SSQLMQQGGGGGSNGQTHLHIQNIG 157
++ G G H +IG
Sbjct: 154 ATSSPIDFKRGRDTGGFHRREYSIG 178
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA
degradation, allosteric REGU; HET: ADP 1PE; 2.40A
{Saccharomyces cerevisiae}
Length = 802
Score = 31.1 bits (70), Expect = 1.8
Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 28/94 (29%)
Query: 632 SPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSF--TRKEHLNNHIRLHTGESP 689
S + C+YC + + + KC+ C K F T+ ++HI H S
Sbjct: 10 SDNSCAYCG--------------IDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVLSH 55
Query: 690 HKCDFCLKTFTRKEHLTNHLKQHAGETEHVCNIC 723
H ++ H G+T C C
Sbjct: 56 HN------------VVSLHPDSDLGDTVLECYNC 77
>3iyo_A Capsid protein; amino acid sequence, cryoelectron microscopy,
dimerization, image processing, computer-assist
molecular sequence DATA; 10.50A {Hepatitis e virus}
Length = 660
Score = 31.1 bits (69), Expect = 1.9
Identities = 30/149 (20%), Positives = 38/149 (25%), Gaps = 12/149 (8%)
Query: 25 PPPPSSSRGSEPPSPNTGGVSGGFISTSP-----SQPS-PQHGHHTLTSLTSPHQMPPPS 78
P P+ G +P G SGG SQP + H T
Sbjct: 15 PMLPAPPPG-QPSGRRRGRRSGGSGGGFWGDRVDSQPFAIPYIHPTNPFAPDVTAAAGAG 73
Query: 79 PIATSPPPPSASDKHDSQSSP-----HITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSS 133
P P P S D P G + P +P S
Sbjct: 74 PRVRQPARPLGSAWRDQAQRPAVASRRRPTTAGAAPLTAVAPAHDTPPVPDVDSRGAILR 133
Query: 134 SQLMQQGGGGGSNGQTHLHIQNIGAVLSP 162
Q S+ T ++ A LSP
Sbjct: 134 RQYNLSTSPLTSSVATGTNLVLYAAPLSP 162
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin
domain, structural genomics, PSI, protein structure
initiative; NMR {Mycobacterium tuberculosis} SCOP:
b.118.1.1
Length = 163
Score = 29.7 bits (67), Expect = 2.2
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 12/62 (19%)
Query: 214 NPDEFNQLLAYHEVFGKLQSSVVTHTSSTL-GLASTSTAQGD---MNSA--------ADN 261
N +L YH V G+ + V T TL G + T T QG+ + +A N
Sbjct: 90 NSSLLTSILTYHVVAGQTSPANVVGTRQTLQGASVTVTGQGNSLKVGNADVVCGGVSTAN 149
Query: 262 GV 263
Sbjct: 150 AT 151
>2czr_A TBP-interacting protein; tata-binding protein (TBP),
hyperthermophilic archaeon, Zn-finger motif,
transcription; 2.30A {Thermococcus kodakarensis} SCOP:
c.52.4.1
Length = 226
Score = 30.4 bits (68), Expect = 2.3
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 410 YKCQYCGKNF---SRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHY 453
YKC+ CGK + + H+ H K ++ E+ + F + +
Sbjct: 155 YKCEECGKYVDIENLEAHLREHGIKLHEKSEEHYEVFELNFREGKVF 201
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics,
PSI-2, protein structure initiative; 2.60A {Geobacter
metallireducens gs-15}
Length = 112
Score = 28.9 bits (65), Expect = 2.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 YKCQYCGKNFSRKEHMVNHV 429
C YCG+ F +E ++H+
Sbjct: 36 GICHYCGEIFPPEELTMDHL 55
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding,
translesion synthesis, UB conjugation pathway; 1.80A
{Homo sapiens}
Length = 99
Score = 28.6 bits (64), Expect = 2.7
Identities = 10/64 (15%), Positives = 17/64 (26%), Gaps = 11/64 (17%)
Query: 773 GEVLERPFKCDVCPKDFTCKGHLVSHLRSHLNERPHVCPHCSKSFVEHTCMIKHIRKNHT 832
E C ++ C + L CP C + E ++ N
Sbjct: 29 FEYFNIAMIIPQCSHNY-CSLCIRKFL-----SYKTQCPTCCVTVTEP-----DLKNNRI 77
Query: 833 LANV 836
L +
Sbjct: 78 LDEL 81
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of
[NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET:
APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB:
3vti_A
Length = 761
Score = 30.5 bits (69), Expect = 3.0
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCG 332
C+ C + Y RR+H + P C CG
Sbjct: 164 CEKCSR----EYHDPHDRRFHAQ--PVACFDCG 190
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring
E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A
{Saccharomyces cerevisiae}
Length = 371
Score = 30.3 bits (67), Expect = 3.2
Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 5/116 (4%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATS 83
+ P S+ P T S S + SP T T+ ++ PP +P A+S
Sbjct: 1 SLTPLSAITVRSMEGPPTVQQQ----SPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASS 56
Query: 84 PPPPSASDKHDSQSSP-HITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQ 138
A + SP + Q P + + T + S + + L
Sbjct: 57 SSSSFAVPTIHFKESPFYKIQRLIPELVMNVEVTGGRGMCSAKFKLSKADYNLLSN 112
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 27.1 bits (59), Expect = 3.3
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 657 TGESPHKCHFCSKSFTRKEHLNNHIRLHTGESPHK 691
+ E H+C C + F + L H LH G+
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
Score = 26.7 bits (58), Expect = 4.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 739 SHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGE 774
S + E+ C +CG+ F +L+ HQ H Q
Sbjct: 6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNS 41
Score = 26.3 bits (57), Expect = 6.2
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 405 TGETPYKCQYCGKNFSRKEHMVNHVRKHTGE 435
+ E ++C+ CG+ F + ++ H H G+
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQ 38
Score = 25.9 bits (56), Expect = 7.2
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 601 TGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCS 637
+ E +QC+ C + F + L+ H H G+ S
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS 44
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 30.1 bits (68), Expect = 3.7
Identities = 17/89 (19%), Positives = 25/89 (28%), Gaps = 15/89 (16%)
Query: 68 LTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSS 127
L++ PP P PPP P PPP + S
Sbjct: 2 LSNSQGQSPPVPFPAPAPPPQPPTP----------ALPHPPAQPPPPPPQQFPQFHVKSG 51
Query: 128 SSPSSSS-----QLMQQGGGGGSNGQTHL 151
++ ++ Q G G NG+
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQ 80
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 29.2 bits (65), Expect = 3.9
Identities = 8/38 (21%), Positives = 10/38 (26%), Gaps = 7/38 (18%)
Query: 715 ETEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCG 752
C C +V R G+ C CG
Sbjct: 19 NIVLTCPECKVY---PPKIVE--RFSEGDV--VCALCG 49
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate
metabolism, kinase, membrane, nucleotide-binding,
nucleus; 2.60A {Saccharomyces cerevisiae} SCOP:
b.1.18.21 d.353.1.1
Length = 252
Score = 29.6 bits (65), Expect = 4.5
Identities = 17/142 (11%), Positives = 28/142 (19%), Gaps = 5/142 (3%)
Query: 20 MEVDTPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSP 79
+ P + S+ S P T PP
Sbjct: 85 VRQPEKNPTNEKIRSKEADSMRPPTSDRSSIALQIGKDPDDFGDGYTRFHEDLSPRPPLE 144
Query: 80 IATS-PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQ 138
T P + + Q + PP + ++ Q +
Sbjct: 145 YTTDIPAVFTDPSVMERYYYTLDRQQSNTDTSWLTPPQLPPQLENVILNKYYATQDQFNE 204
Query: 139 QGGGGGSNGQ----THLHIQNI 156
G HL +I
Sbjct: 205 NNSGALPIPNHVVLNHLVTSSI 226
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding
protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB:
2ab7_A
Length = 29
Score = 26.2 bits (57), Expect = 4.8
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 664 CHF--CSKSFTRKEHLNNHIRLHTG 686
CHF C +SF + LN H ++HTG
Sbjct: 5 CHFENCGRSFNDRRKLNRHKKIHTG 29
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 28.8 bits (64), Expect = 4.8
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 55 QPSPQHGHHTLTSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGI 109
H HH+ + H + P+ + S P DK+ HI +H I
Sbjct: 4 HHHHHHHHHSSGHIEGRHMLEEPAA-SFSQPGSMGLDKNTVHDQEHIMEHLEGVI 57
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay,
zinc-finger, ATP-binding, metal-BIN UPF2, UPF1,
helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A
2iyk_A
Length = 800
Score = 29.9 bits (67), Expect = 5.2
Identities = 21/93 (22%), Positives = 26/93 (27%), Gaps = 28/93 (30%)
Query: 633 PHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHFCSKSF--TRKEHLNNHIRLHTGESPH 690
H CSYC +H C+ K F R +HI H +
Sbjct: 6 IHACSYCG--------------IHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKC 51
Query: 691 KCDFCLKTFTRKEHLTNHLKQHAGETEHVCNIC 723
K +T H GET C C
Sbjct: 52 K------------EVTLHKDGPLGETVLECYNC 72
>3ntt_A Capsid protein; gene therapy vector, cystic fibros sialic acid
receptor, icosahedral virus; 3.45A {Adeno-associated
virus - 5}
Length = 724
Score = 29.8 bits (66), Expect = 5.4
Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 14/139 (10%)
Query: 76 PPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSS-----SSP 130
P + + + K P + P +S PS S + P
Sbjct: 126 EPFGLVEEGAKTAPTGKRIDDHFPK-RKKARTEEDSKPSTSSDAEAGPSGSQQLQIPAQP 184
Query: 131 SSSSQLMQQGGGGGSNGQTHLHIQNIGAVLSPSYGQHC-IQQDDTQHSTVQS-----PPG 184
+SS GGG + Q V + S HC + T + P
Sbjct: 185 ASSLGADTMSAGGGGPLGD--NNQGADGVGNASGDWHCDSTWMGDRVVTKSTRTWVLPSY 242
Query: 185 QQQQYQQMDTSQSSQQQSD 203
QY+++ + ++
Sbjct: 243 NNHQYREIKSGSVDGSNAN 261
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 81
Score = 27.4 bits (61), Expect = 5.5
Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 7/62 (11%)
Query: 300 CDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYTCAVC 359
C C + + +YH E F C C + + + C C
Sbjct: 18 CHGCSLLMTGPFMVAGEFKYHPEC--FACMSCKVIIEDGDAY-----ALVQHATLYCGKC 70
Query: 360 FH 361
+
Sbjct: 71 HN 72
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 28.0 bits (61), Expect = 6.0
Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Query: 716 TEHVCNICSKPFLKKEHLVNHSRSHTGERPFACTDCGKSFPLKGNLLFHQRSHRKQNGEV 775
++ C +CS + + + H +S ++ + +
Sbjct: 31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQ-GEDSVPAKKFKAAPAEISDG 89
Query: 776 LERPFKCDVCPKDFTCKGHLVSHLRSH 802
+R C VC F+ SH
Sbjct: 90 EDRSKCCPVCNMTFSSPVVAESHYIGK 116
>1ki0_A Angiostatin; kringle domains, hydrolase; HET: BCN; 1.75A {Homo
sapiens} SCOP: g.14.1.1 g.14.1.1 g.14.1.1 PDB: 2doh_X*
2doi_X 1cea_A 1ceb_A* 1b2i_A* 1pkr_A 2l0s_A 2kj4_A
1i5k_A 1hpj_A 1hpk_A*
Length = 253
Score = 29.0 bits (63), Expect = 6.0
Identities = 22/148 (14%), Positives = 34/148 (22%), Gaps = 2/148 (1%)
Query: 547 ESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVNHVRQHTGETPY 606
SPH+ + + + N+ R D Y R ++ +
Sbjct: 31 TSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILECEEECMHCS 90
Query: 607 QCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRLHTGESPHKCHF 666
Y K L SPH Y F K+ N+ R E C
Sbjct: 91 GENYDGKISKTMSGLECQAWDSQ--SPHAHGYIPSKFPNKNLKKNYCRNPDRELRPWCFT 148
Query: 667 CSKSFTRKEHLNNHIRLHTGESPHKCDF 694
+ + S
Sbjct: 149 TDPNKRWELCDIPRCTTPPPSSGPTYQC 176
Score = 29.0 bits (63), Expect = 6.2
Identities = 23/150 (15%), Positives = 36/150 (24%), Gaps = 2/150 (1%)
Query: 519 ETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPH 578
+PHR F T + N+ R + Y R ++ +
Sbjct: 31 TSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILECEEECMHCS 90
Query: 579 KCNYCAKSFTRKEHLVNHVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSY 638
NY K L +P+ Y P F K+ N+ R E C
Sbjct: 91 GENYDGKISKTMSGLECQAWDSQ--SPHAHGYIPSKFPNKNLKKNYCRNPDRELRPWCFT 148
Query: 639 CKQSFTRKDHLNNHVRLHTGESPHKCHFCS 668
+ + S
Sbjct: 149 TDPNKRWELCDIPRCTTPPPSSGPTYQCLK 178
>2wvr_C DNA replication factor CDT1; DNA replication license, DNA
replication inhibitor, phosphoprotein, UBL conjugation,
DNA-binding, polymorphism; HET: DNA; 3.30A {Homo
sapiens} PDB: 2klo_A*
Length = 546
Score = 29.3 bits (64), Expect = 6.1
Identities = 13/125 (10%), Positives = 26/125 (20%)
Query: 24 TPPPPSSSRGSEPPSPNTGGVSGGFISTSPSQPSPQHGHHTLTSLTSPHQMPPPSPIATS 83
S + + PP+ + + + P P
Sbjct: 41 ASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKK 100
Query: 84 PPPPSASDKHDSQSSPHITQHTGPGIFQSPPPTSHISKIPSPSSSSPSSSSQLMQQGGGG 143
P + H + + T Q + S+ S +G
Sbjct: 101 STPAAGQPPHLTSAQDQDTISELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPE 160
Query: 144 GSNGQ 148
G+
Sbjct: 161 EPCGE 165
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM
domains protein 1, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 82
Score = 27.3 bits (61), Expect = 6.2
Identities = 11/53 (20%), Positives = 18/53 (33%)
Query: 402 RCHTGETPYKCQYCGKNFSRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYV 454
+C T E KC+ C K + V + + C CK+ +
Sbjct: 8 KCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFP 60
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM
domain protein CLP-36, contractIle protein, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 79
Score = 27.0 bits (60), Expect = 6.3
Identities = 14/69 (20%), Positives = 19/69 (27%), Gaps = 9/69 (13%)
Query: 293 PVMGNHTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGS 352
CD CG + + R H E + C CG L G +
Sbjct: 11 NAQKLPMCDKCGTGIVGVFVKLRDRHRHPEC--YVCTDCGT------NLKQKGHFFVEDQ 62
Query: 353 MYTCAVCFH 361
+Y C
Sbjct: 63 IY-CEKHAR 70
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle;
NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Length = 192
Score = 28.8 bits (64), Expect = 6.4
Identities = 26/170 (15%), Positives = 48/170 (28%), Gaps = 23/170 (13%)
Query: 296 GNHTCDLCGKF-FPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMY 354
G C +C K + +H + F C VC K D + + +
Sbjct: 6 GGKKCGVCQKAVYFAEEVQCEGSSFH--KSCFLCMVCKKNLDSTTVAVHGDEIY------ 57
Query: 355 TCAVCFHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPY---- 410
C C+ + + ++ S+ +K + H +
Sbjct: 58 -CKSCYGKKYGPKGKGKGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSD 116
Query: 411 KCQYCGKNFSRKEHMVNHVRKHTGETPH----RCEICKKAFTRKEHYVNH 456
C CG+ E ++ G++ H RC C K+
Sbjct: 117 GCPRCGQAVYAAEKVI-----GAGKSWHKSCFRCAKCGKSLESTTLADKD 161
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.39.1.3 g.39.1.3
Length = 73
Score = 27.0 bits (59), Expect = 6.8
Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
Query: 296 GNHTCDLCGKFFPYRYQMIVHRRYHTERKPFTCHVCGKAFDFQAELMSHGKCHLGGSMYT 355
G+ CD C K+ R + YH C CG+ F E+ +L GS
Sbjct: 4 GSSGCDSCEKYITGRVLEAGEKHYHPS--CALCVRCGQMFAEGEEM------YLQGSSIW 55
Query: 356 CAVCFHVFANEES 368
C E+S
Sbjct: 56 HPACRQAARTEDS 68
>2ecw_A Tripartite motif-containing protein 30; metal binding protein,
structural genomics, NPPSFA; NMR {Mus musculus}
Length = 85
Score = 27.0 bits (60), Expect = 6.9
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 17/75 (22%)
Query: 774 EVLERPFKCDVCPKDFT-----------CKGHLVSHLRSHLN-ERPHVCPHCSKSFVEHT 821
E+++ C +C + C+ + + S+ N + CP C +
Sbjct: 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF-- 71
Query: 822 CMIKHIRKNHTLANV 836
+++ N +AN+
Sbjct: 72 ---GNLKPNLHVANI 83
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM
domain EVH1 DO cell motility, phosphorylation,
cytoskeleton; 2.35A {Homo sapiens}
Length = 65
Score = 26.7 bits (59), Expect = 7.2
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Query: 327 TCHVCGKAFDFQAELMSHGKC--HLGGSMYTCAVCFHVFANEESLQRHTKRHSIDRPYCC 384
C C A D + + +++ H + C+ C ++ + +C
Sbjct: 4 VCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQKFMPVE------GMVFCS 57
Query: 385 SVCMKTFA 392
C K +
Sbjct: 58 VECKKRMS 65
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein;
HTLV-II matrix protein, retroviral matrix protein; NMR
{Human t-lymphotropic virus 2} SCOP: a.61.1.2
Length = 137
Score = 27.9 bits (61), Expect = 7.2
Identities = 10/45 (22%), Positives = 16/45 (35%)
Query: 66 TSLTSPHQMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIF 110
S ++P P T+ PPP ++ P + T F
Sbjct: 93 VSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF 137
Score = 27.9 bits (61), Expect = 7.5
Identities = 9/43 (20%), Positives = 13/43 (30%)
Query: 73 QMPPPSPIATSPPPPSASDKHDSQSSPHITQHTGPGIFQSPPP 115
Q+ P +P A P P + P H P +
Sbjct: 92 QVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTT 134
>2air_B Aspartate carbamoyltransferase regulatory chain; aspartate
transcarbamylase, alanosine, carbamyl phosphate, T
transferase; HET: AL0; 2.00A {Escherichia coli} SCOP:
d.58.2.1 g.41.7.1 PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G*
1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B*
1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B
1tug_B* 1xjw_B* ...
Length = 153
Score = 28.1 bits (63), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 404 HTGETPYKCQYCGKNFSRKEHMVN 427
+ KC+YC K FS + N
Sbjct: 130 RANDIALKCKYCEKEFSHNVVLAN 153
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain
associated with ring and TRAF domains protein 1,
malignant 62; NMR {Homo sapiens}
Length = 76
Score = 26.8 bits (59), Expect = 7.8
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 383 CCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNFSRKE 423
C + C +R++ L H + + KC++CG +FS +
Sbjct: 19 CPNRCPMKLSRRD-LPAHLQHDCPKRRLKCEFCGCDFSGEA 58
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H
cell surface, transport protein; HET: HEC; 1.76A
{Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Length = 874
Score = 29.3 bits (63), Expect = 7.9
Identities = 31/334 (9%), Positives = 58/334 (17%), Gaps = 6/334 (1%)
Query: 360 FHVFANEESLQRHTKRHSIDRPYCCSVCMKTFARKEHLENHTRCHTGETPYKCQYCGKNF 419
H T + +E + R + CQ C
Sbjct: 310 IHKGTYAMVGYSGTAYDFSGTMAKAAAESGYPQYREGKDVSERVTLPVSIGNCQSCHSTD 369
Query: 420 SRKEHMVNHVRKHTGETPHRCEICKKAFTRKEHYVNHVMWHTGETPHVCQVCGKKYTRKE 479
+ + H G C + ++ V T +
Sbjct: 370 DKGPVDAASFKHHKGLACASCHMSGFNPVDNSEWLTPPEGQKDRG-FVGNYFHYYATPEI 428
Query: 480 HLANHMRSHTNDTPFKCEIC----TKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKE 535
+ C C + + K H T + + TF +
Sbjct: 429 DGIPGVNLVHVFQNGGCASCHAEQGEEGSAKYHLAKANATKLLRTEYAYKLENGTFDVAK 488
Query: 536 HLLNHVRQHTGESPHKCNYCAKSFTRKEHLVNHVRQHTGDSPHKCNYCAKSFTRKEHLVN 595
L + + K F N G P +L
Sbjct: 489 GELTFTVNWHSDVAPHQDPKVKEFWVSLTAFNGTEYTMGPRPSNGTLGRSENRISVNLAK 548
Query: 596 HVRQHTGETPYQCQYCPKAFSRKDHLVNHVRQHTGESPHKCSYCKQSFTRKDHLNNHVRL 655
+ ++ + N+
Sbjct: 549 VETNANLTAVPNGSKVTYTLTGIKAVIGTSSVPYKQIVSIGKGFMDGKLLICA-NSAELD 607
Query: 656 HTGESPHKCHFCSKSFTRKEHLNNHIRLHTGESP 689
T ++ C +N S
Sbjct: 608 PTMDAAIDCSNTEAPIYEVIVGSNKASFSADASN 641
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding;
2.74A {Arabidopsis thaliana}
Length = 358
Score = 28.8 bits (63), Expect = 7.9
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 808 HVCPHCSKSFVEHTCMIKHIRKNHT 832
C+K F + KH++ HT
Sbjct: 307 CGAKGCTKLFHAAEFVYKHLKLKHT 331
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain,
pleckst homology domain, C1 domain, guanine-nucleotide
releasing FA metal-binding; 2.73A {Homo sapiens} PDB:
2d86_A
Length = 587
Score = 29.2 bits (65), Expect = 8.0
Identities = 9/56 (16%), Positives = 13/56 (23%), Gaps = 4/56 (7%)
Query: 497 EICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKC 552
I ++ T H + E C C + S HK
Sbjct: 508 NIYPENATANGH---DFQMFSFEETTSCKACQMLLRGTFYQGYR-CHRCRASAHKE 559
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 25.5 bits (55), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 634 HKCSYCKQSFTRKDHLNNHVRLH 656
+KC C++SF K L+ H R+H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
Score = 25.1 bits (54), Expect = 9.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 662 HKCHFCSKSFTRKEHLNNHIRLH 684
+KC C +SF K L+ H R+H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue;
Zn-binding domain, rossmann fold domain; HET: MYK NAD;
2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Length = 290
Score = 28.4 bits (64), Expect = 9.1
Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 348 HLGGSMYT--CAVCFHVFANEESLQRHTKRHSIDRPYCCS 385
L G+++ C C + + + + T P C
Sbjct: 147 SLHGNVFEAVCCTCNKIVKLNKIMLQKTSHFMHQLPPECP 186
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.130 0.417
Gapped
Lambda K H
0.267 0.0472 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 13,011,990
Number of extensions: 751131
Number of successful extensions: 8150
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6297
Number of HSP's successfully gapped: 3021
Length of query: 896
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 794
Effective length of database: 3,853,851
Effective search space: 3059957694
Effective search space used: 3059957694
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.3 bits)