Query psy16261
Match_columns 158
No_of_seqs 168 out of 1810
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 16:54:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.8 3.9E-19 1.3E-23 111.3 11.7 91 3-99 17-107 (107)
2 3knb_A Titin; IG-like, titin, 99.8 5.2E-18 1.8E-22 104.8 11.9 89 3-97 9-99 (100)
3 2cqv_A MLCK, myosin light chai 99.8 2.6E-17 8.8E-22 103.6 12.9 95 3-103 11-105 (114)
4 3qp3_A Titin; I-SET IG-like, s 99.7 1.2E-16 4E-21 98.7 13.0 90 3-98 12-101 (103)
5 1g1c_A Immunoglobulin-like dom 99.7 1.8E-16 6.2E-21 97.0 13.2 90 3-97 9-98 (99)
6 2bk8_A Connectin, M1, titin he 99.7 2.1E-16 7.2E-21 96.6 12.3 90 2-97 4-94 (97)
7 3puc_A Titin; I-SET IG-like do 99.7 3.6E-16 1.2E-20 95.6 12.8 89 3-97 10-98 (99)
8 1wit_A Twitchin 18TH IGSF modu 99.7 9.1E-17 3.1E-21 97.5 9.5 85 3-95 6-92 (93)
9 3irg_B Obscurin-like protein 1 99.7 2.7E-16 9.4E-21 97.5 11.7 90 3-98 17-106 (107)
10 2dm2_A Palladin; beta-sandwich 99.7 2.3E-16 7.7E-21 98.6 10.9 95 3-102 12-107 (110)
11 2e7c_A Myosin-binding protein 99.7 5.1E-16 1.7E-20 98.3 12.6 87 6-99 31-117 (118)
12 2kdg_A Myotilin; immonoglobuli 99.7 3.2E-16 1.1E-20 96.1 11.2 90 4-98 10-99 (100)
13 1u2h_A APEG-1, aortic preferen 99.7 6.5E-16 2.2E-20 94.5 12.5 90 2-97 8-98 (99)
14 1wwb_X Protein (brain derived 99.7 5.2E-16 1.8E-20 96.2 11.4 86 13-99 15-100 (103)
15 2edj_A Roundabout homolog 2; K 99.7 1.8E-16 6.3E-21 97.3 8.8 88 2-98 11-99 (100)
16 3irg_A Titin; IG-like, titin, 99.7 9E-16 3.1E-20 93.8 11.6 89 3-97 9-99 (100)
17 2dm3_A KIAA0992 protein, palla 99.7 1.9E-16 6.4E-21 98.9 8.6 97 2-103 12-108 (110)
18 1gxe_A Myosin binding protein 99.7 1.7E-16 5.9E-21 103.6 8.7 85 6-96 25-138 (139)
19 2kkq_A Myotilin; unknown funct 99.7 4.2E-16 1.4E-20 98.6 10.2 95 3-102 19-114 (116)
20 1nct_A Titin; cell adhesion, g 99.7 1.7E-16 5.7E-21 98.9 7.7 89 2-96 17-105 (106)
21 2yr3_A Myosin light chain kina 99.7 4.2E-16 1.4E-20 95.5 9.4 84 3-95 15-98 (99)
22 2yuz_A Myosin-binding protein 99.7 5.3E-16 1.8E-20 95.7 9.5 87 4-100 12-98 (100)
23 1fhg_A Telokin; immunoglobulin 99.7 2.4E-15 8.2E-20 99.5 12.8 94 3-101 45-138 (154)
24 2yd1_A Tyrosine-protein phosph 99.7 6.5E-15 2.2E-19 101.6 14.9 92 2-98 9-103 (212)
25 2ckn_A Basic fibroblast growth 99.7 8.9E-16 3E-20 93.6 9.1 81 4-95 14-94 (95)
26 1he7_A High affinity nerve gro 99.7 1.6E-15 5.4E-20 97.1 10.5 88 13-101 14-103 (126)
27 2eo9_A Roundabout homolog 1; b 99.7 7.3E-16 2.5E-20 97.5 8.9 89 3-100 12-101 (118)
28 3kvq_A Vascular endothelial gr 99.6 4.7E-16 1.6E-20 96.6 7.6 89 4-100 15-103 (108)
29 3cx2_A Myosin-binding protein 99.6 9.7E-15 3.3E-19 91.0 13.1 92 4-96 9-107 (108)
30 2nzi_A Titin; IG-domain, FNIII 99.6 2.6E-15 8.9E-20 108.6 12.0 91 2-97 7-98 (305)
31 1waa_A Titin; metal binding pr 99.6 4.2E-15 1.4E-19 90.5 11.0 85 2-97 8-92 (93)
32 3lcy_A Titin; A-BAND, IG tande 99.6 6.1E-15 2.1E-19 100.0 13.0 90 3-98 11-100 (197)
33 2dav_A SLOW MYBP-C, myosin-bin 99.6 1E-14 3.5E-19 93.4 13.1 98 4-102 12-117 (126)
34 2lu7_A Obscurin-like protein 1 99.6 1.8E-15 6E-20 90.5 8.9 80 7-97 4-83 (84)
35 3b43_A Titin; I-SET IG fold, e 99.6 2.4E-15 8.3E-20 118.1 12.1 88 5-98 390-477 (570)
36 2rik_A Titin; I-SET IG fold, p 99.6 6.1E-15 2.1E-19 105.7 13.2 92 2-99 8-99 (284)
37 2j8h_A Titin, connectin; cardi 99.6 5.8E-15 2E-19 100.4 12.4 91 2-97 7-98 (197)
38 3bp6_B Programmed cell death 1 99.6 3.1E-15 1.1E-19 102.4 10.8 96 2-99 5-105 (202)
39 3ojm_B Fibroblast growth facto 99.6 2.8E-15 9.7E-20 104.1 10.6 86 7-97 27-112 (231)
40 3mtr_A N-CAM-1, NCAM-1, neural 99.6 7E-15 2.4E-19 101.7 12.3 91 5-101 24-116 (215)
41 2cr3_A Basic fibroblast growth 99.6 1.3E-15 4.3E-20 93.6 7.6 86 5-101 9-94 (99)
42 3b43_A Titin; I-SET IG fold, e 99.6 6.6E-15 2.3E-19 115.6 13.0 88 4-97 10-97 (570)
43 2a38_A Titin; Z1Z2, structural 99.6 9.1E-15 3.1E-19 99.1 11.7 88 3-96 9-98 (194)
44 2jll_A NCAM2, neural cell adhe 99.6 1.5E-14 5.1E-19 107.9 13.7 88 6-98 7-100 (389)
45 3kld_A Contactin 4, axcam, BIG 99.6 2.5E-15 8.4E-20 112.6 8.8 127 6-148 212-381 (384)
46 2edf_A Obscurin; beta-sandwich 99.6 1E-14 3.4E-19 89.9 10.1 90 2-102 11-100 (103)
47 3caf_A Fibroblast growth facto 99.6 4E-15 1.4E-19 91.2 8.0 82 6-95 15-99 (100)
48 2v44_A NCAM2, neural cell adhe 99.6 4.9E-14 1.7E-18 95.3 13.9 91 2-98 5-96 (189)
49 4hwu_A Fibroblast growth facto 99.6 1.1E-14 3.8E-19 88.5 9.5 83 5-99 7-89 (95)
50 3bfo_A Mucosa-associated lymph 99.6 1.1E-14 3.6E-19 88.0 9.4 81 2-97 6-87 (91)
51 3grw_A Fibroblast growth facto 99.6 1E-14 3.6E-19 102.1 10.7 84 6-97 22-108 (241)
52 2rik_A Titin; I-SET IG fold, p 99.6 5.5E-14 1.9E-18 100.6 14.7 86 8-99 108-193 (284)
53 1x44_A Myosin-binding protein 99.6 1.5E-14 5.3E-19 89.2 9.8 87 3-100 11-99 (103)
54 3jz7_A MCAR, CAR, coxsackievir 99.6 1.6E-14 5.3E-19 99.1 10.8 142 2-152 3-214 (214)
55 3rbg_A Cytotoxic and regulator 99.6 3.9E-14 1.3E-18 90.4 11.9 94 3-101 5-105 (124)
56 3m45_A Cell adhesion molecule 99.6 5.7E-14 1.9E-18 86.9 12.0 89 5-98 12-107 (108)
57 2yd6_A PTPRD protein; hydrolas 99.6 1.2E-13 4.1E-18 95.3 14.9 91 2-97 9-100 (212)
58 2edn_A Myosin-binding protein 99.6 2E-14 6.8E-19 91.1 9.8 94 4-98 17-117 (118)
59 2e6p_A Obscurin-like protein 1 99.6 1.6E-14 5.4E-19 89.2 9.1 81 9-100 20-100 (104)
60 4f80_A Butyrophilin subfamily 99.6 5E-14 1.7E-18 98.1 12.3 93 4-98 9-120 (226)
61 2eny_A Obscurin; beta-sandwich 99.6 2.1E-14 7E-19 89.1 9.2 87 4-100 13-100 (104)
62 2k1m_A Myosin-binding protein 99.6 5.5E-14 1.9E-18 85.5 11.0 82 4-96 13-94 (95)
63 1hng_A CD2; T lymphocyte adhes 99.6 1.6E-14 5.4E-19 97.5 9.4 127 7-149 4-175 (176)
64 3laf_A Deleted in colorectal c 99.6 2.2E-14 7.7E-19 107.3 10.7 131 6-152 228-403 (403)
65 3s35_X Vascular endothelial gr 99.6 8.1E-14 2.8E-18 88.3 11.8 92 5-99 14-112 (122)
66 2iep_A Muscle-specific kinase 99.6 1.4E-14 4.9E-19 98.0 8.6 86 3-96 11-98 (192)
67 2dlt_A Myosin binding protein 99.6 2.9E-14 1E-18 88.4 9.0 86 2-96 11-96 (106)
68 2lvc_A Obscurin-like protein 1 99.6 3.1E-14 1.1E-18 86.3 8.7 68 9-83 16-83 (91)
69 2r15_A Myomesin-1; sarcomeric 99.5 1.3E-13 4.5E-18 94.5 12.9 88 5-97 123-210 (212)
70 1gl4_B Basement membrane-speci 99.5 9.3E-14 3.2E-18 84.8 10.9 81 5-96 16-97 (98)
71 2c5d_C AXL oncogene, tyrosine- 99.5 1.6E-13 5.3E-18 93.3 13.0 95 2-97 5-105 (195)
72 2va4_A NCAM2, N-CAM 2, neural 99.5 1.6E-14 5.4E-19 97.7 7.7 83 7-97 12-94 (192)
73 1wwc_A Protein (NT-3 growth fa 99.5 8.5E-14 2.9E-18 87.9 10.5 83 15-99 21-103 (118)
74 1epf_A NCAM, protein (neural c 99.5 2E-13 6.8E-18 92.3 12.8 91 2-97 5-99 (191)
75 2dku_A KIAA1556 protein; beta- 99.5 1E-13 3.6E-18 85.3 10.4 88 4-102 13-100 (103)
76 3qs7_E FL cytokine receptor; i 99.5 1.4E-13 4.9E-18 104.8 13.2 139 6-155 234-419 (423)
77 2edh_A Obscurin; structural ge 99.5 2.7E-13 9.4E-18 84.8 12.2 85 4-100 24-108 (113)
78 2yuv_A Myosin-binding protein 99.5 9.2E-14 3.1E-18 85.2 9.8 80 9-99 18-97 (100)
79 2cry_A KIN of IRRE-like protei 99.5 4.7E-15 1.6E-19 94.3 3.9 91 6-98 20-114 (122)
80 2edk_A Myosin-binding protein 99.5 1.4E-14 4.8E-19 89.1 5.6 85 3-98 12-100 (101)
81 4fa8_A Secreted protein BARF1; 99.5 2.9E-14 9.9E-19 98.6 7.5 86 7-98 1-106 (203)
82 3rbs_A Myomesin-1; immunoglobu 99.5 3.5E-14 1.2E-18 98.3 7.8 79 9-95 126-205 (207)
83 3sgj_C Human FCG3A receptor; r 99.5 2.9E-14 9.8E-19 98.4 7.2 70 2-87 10-80 (204)
84 2e7b_A Obscurin; IG-like domai 99.5 1.1E-13 3.9E-18 85.1 8.9 85 4-99 13-97 (103)
85 1pd6_A Cardiac MYBP-C;, myosin 99.5 2.8E-13 9.7E-18 83.9 10.7 81 5-96 22-103 (104)
86 3rbs_A Myomesin-1; immunoglobu 99.5 3.8E-13 1.3E-17 93.1 12.5 72 7-82 10-82 (207)
87 2cr6_A KIAA1556 protein, obscu 99.5 4.6E-14 1.6E-18 88.8 7.2 87 4-99 18-104 (115)
88 2wv3_A Neuroplastin; igcam, me 99.5 1.2E-12 4E-17 88.7 14.5 86 5-96 98-189 (190)
89 2yd9_A Receptor-type tyrosine- 99.5 2.3E-13 7.8E-18 98.6 11.3 92 2-98 9-101 (304)
90 2nzi_A Titin; IG-domain, FNIII 99.5 4.2E-13 1.4E-17 97.0 12.6 89 8-102 113-202 (305)
91 2j8h_A Titin, connectin; cardi 99.5 3E-13 1E-17 91.8 10.9 84 7-96 112-196 (197)
92 2a38_A Titin; Z1Z2, structural 99.5 2.6E-13 8.9E-18 91.8 10.4 84 6-95 110-193 (194)
93 1f97_A Junction adhesion molec 99.5 3.7E-13 1.3E-17 92.1 11.1 88 2-99 4-105 (212)
94 2e6q_A Obscurin-like protein 1 99.5 7.3E-13 2.5E-17 83.2 11.2 88 2-100 11-108 (112)
95 2v5t_A NCAM2, N-CAM 2, neural 99.5 2.2E-13 7.5E-18 91.8 9.4 75 4-87 7-83 (189)
96 3so5_A LIG-3, leucine-rich rep 99.5 7.8E-13 2.7E-17 81.9 11.2 93 2-95 13-111 (112)
97 2y25_A Myomesin; structural pr 99.5 4E-13 1.4E-17 97.4 11.3 87 6-97 229-315 (317)
98 2v9t_A Roundabout homolog 1; s 99.5 1.9E-13 6.6E-18 86.0 8.4 91 3-97 13-109 (117)
99 3kld_A Contactin 4, axcam, BIG 99.5 2.8E-13 9.6E-18 101.4 10.5 81 6-96 302-382 (384)
100 3qs7_E FL cytokine receptor; i 99.5 9.9E-13 3.4E-17 100.1 13.6 86 5-97 54-139 (423)
101 1ry7_B FGFR-3, fibroblast grow 99.5 1.2E-13 4.3E-18 101.0 8.3 85 8-97 132-216 (334)
102 2dm7_A KIAA1556 protein; beta- 99.5 7.4E-13 2.5E-17 82.1 10.6 84 4-99 13-96 (108)
103 2cpc_A KIAA0657 protein; immun 99.5 8.4E-13 2.9E-17 82.5 10.9 80 9-99 23-102 (113)
104 3qs9_E FL cytokine receptor; i 99.5 9.8E-14 3.4E-18 108.4 8.0 81 9-99 336-416 (527)
105 2wv3_A Neuroplastin; igcam, me 99.5 3.3E-13 1.1E-17 91.4 9.4 78 9-98 12-92 (190)
106 3p3y_A Neurofascin; IG domains 99.5 1.5E-13 5.1E-18 102.8 8.4 82 8-98 231-312 (404)
107 1z9m_A GAPA225; nectin-like, I 99.5 8.5E-13 2.9E-17 86.3 10.9 93 4-102 43-143 (145)
108 2ens_A Advanced glycosylation 99.5 5.3E-14 1.8E-18 85.7 4.7 79 3-96 14-94 (96)
109 3qr2_A Basigin; CD147, EMMPRIN 99.5 7.2E-13 2.4E-17 85.7 10.2 83 2-87 24-116 (137)
110 2iep_A Muscle-specific kinase 99.5 2.6E-13 8.8E-18 91.7 8.4 85 5-98 106-191 (192)
111 2ec8_A MAST/stem cell growth f 99.5 7.4E-13 2.5E-17 102.7 11.9 89 8-98 322-412 (524)
112 3lcy_A Titin; A-BAND, IG tande 99.4 1.7E-12 5.8E-17 87.8 11.8 85 7-97 111-196 (197)
113 3mjg_X Beta-type platelet-deri 99.4 2E-12 6.7E-17 92.8 12.7 92 7-99 189-280 (289)
114 3b5h_A Cervical EMMPRIN, HAB18 99.4 2E-12 6.9E-17 86.9 12.1 88 5-97 89-183 (184)
115 3k0w_A Mucosa-associated lymph 99.4 5.6E-13 1.9E-17 92.4 9.4 81 2-97 21-102 (218)
116 1nbq_A JAM, junctional adhesio 99.4 3.5E-13 1.2E-17 92.0 8.1 88 2-99 7-108 (209)
117 2yd1_A Tyrosine-protein phosph 99.4 7.9E-13 2.7E-17 91.1 9.8 85 5-99 116-202 (212)
118 3p2t_A Leukocyte immunoglobuli 99.4 2E-13 6.7E-18 93.2 6.7 87 2-97 8-96 (196)
119 3qs9_E FL cytokine receptor; i 99.4 1.3E-12 4.4E-17 102.1 12.0 137 5-152 233-416 (527)
120 2wim_A N-CAM 2, NCAM2, neural 99.4 4.1E-12 1.4E-16 91.0 13.7 91 2-98 7-98 (291)
121 3s97_C Contactin-1; carbonic a 99.4 8.4E-13 2.9E-17 89.6 9.6 79 8-96 122-200 (201)
122 2r15_A Myomesin-1; sarcomeric 99.4 3.9E-12 1.3E-16 87.2 12.9 77 11-93 14-91 (212)
123 2eo1_A OBSCN protein, cDNA FLJ 99.4 1.2E-12 4.2E-17 80.3 9.2 81 7-98 19-99 (102)
124 3zyj_A Leucine-rich repeat-con 99.4 8E-13 2.8E-17 100.9 10.2 91 2-101 344-437 (440)
125 3laf_A Deleted in colorectal c 99.4 6E-13 2E-17 99.5 9.3 85 5-98 318-402 (403)
126 4fqp_A Poliovirus receptor; im 99.4 1.8E-12 6E-17 94.3 11.4 79 10-100 228-307 (313)
127 1cs6_A Axonin-1; neural cell a 99.4 1.7E-12 5.7E-17 96.7 11.5 81 6-96 301-381 (382)
128 2yd9_A Receptor-type tyrosine- 99.4 4.2E-13 1.4E-17 97.2 8.1 75 5-88 114-191 (304)
129 3ejj_X Macrophage colony-stimu 99.4 1E-12 3.4E-17 94.2 9.9 84 5-96 95-180 (289)
130 2v5m_A Dscam; neurobiology SPL 99.4 6.1E-13 2.1E-17 99.1 8.9 123 9-148 222-387 (388)
131 2v9r_A Roundabout homolog 1; p 99.4 1.3E-12 4.4E-17 89.5 9.7 93 2-97 12-109 (212)
132 2ec8_A MAST/stem cell growth f 99.4 7.9E-12 2.7E-16 96.9 15.1 91 5-98 217-310 (524)
133 2jll_A NCAM2, neural cell adhe 99.4 3E-12 1E-16 95.4 12.3 90 7-102 108-199 (389)
134 3grw_A Fibroblast growth facto 99.4 2.1E-12 7.2E-17 90.3 10.7 101 6-107 121-228 (241)
135 2yd6_A PTPRD protein; hydrolas 99.4 2.7E-12 9.2E-17 88.4 11.1 87 5-97 114-204 (212)
136 2ifg_A High affinity nerve gro 99.4 5.8E-14 2E-18 104.0 2.7 133 4-152 163-347 (347)
137 2id5_A Lingo-1, leucine rich r 99.4 5.9E-13 2E-17 102.4 8.1 82 6-96 392-476 (477)
138 2ny1_B T-cell surface glycopro 99.4 4.2E-13 1.4E-17 90.5 6.3 134 7-154 3-183 (184)
139 2v5t_A NCAM2, N-CAM 2, neural 99.4 1.8E-12 6.1E-17 87.3 9.3 80 9-96 108-187 (189)
140 4fa8_A Secreted protein BARF1; 99.4 3.4E-13 1.1E-17 93.2 5.7 80 6-90 113-195 (203)
141 3sbw_C Programmed cell death 1 99.4 5.1E-12 1.7E-16 87.2 11.5 93 3-99 5-117 (222)
142 2x1w_L Vascular endothelial gr 99.4 6.8E-12 2.3E-16 86.7 12.1 93 6-99 112-209 (213)
143 2wim_A N-CAM 2, NCAM2, neural 99.4 2.1E-12 7E-17 92.6 9.8 132 6-153 105-287 (291)
144 3r4d_A CEA-related cell adhesi 99.4 2.5E-12 8.6E-17 87.9 9.8 88 2-98 2-109 (208)
145 2vr9_A Roundabout 1, ROBO; imm 99.4 7.9E-13 2.7E-17 91.1 7.2 91 2-96 12-105 (217)
146 1bih_A Hemolin; insect immunit 99.4 1.3E-12 4.5E-17 97.4 8.9 85 7-97 220-307 (395)
147 3uto_A Twitchin; kinase, muscl 99.4 4.4E-12 1.5E-16 100.0 12.1 85 5-95 488-572 (573)
148 1qz1_A Neural cell adhesion mo 99.4 9.4E-12 3.2E-16 89.2 12.9 92 2-97 5-99 (291)
149 1vca_A VCAM-D1,2, human vascul 99.4 4.5E-12 1.5E-16 87.2 10.7 88 3-99 4-92 (202)
150 2v9r_A Roundabout homolog 1; p 99.4 1.9E-12 6.7E-17 88.6 8.8 84 6-99 118-204 (212)
151 3rjd_A High affinity immunoglo 99.4 1.6E-12 5.5E-17 91.7 8.6 74 2-91 4-78 (262)
152 2o26_X MAST/stem cell growth f 99.4 2.9E-12 9.8E-17 92.1 9.6 89 7-98 196-289 (290)
153 2fbo_J V1V2;, variable region- 99.4 3.9E-12 1.3E-16 89.3 9.9 89 3-98 6-132 (250)
154 1rhf_A Tyrosine-protein kinase 99.4 7.3E-12 2.5E-16 84.0 10.8 92 3-98 6-98 (182)
155 1fnl_A Low affinity immunoglob 99.4 1.4E-12 4.8E-17 87.4 7.2 72 2-89 10-82 (175)
156 1qz1_A Neural cell adhesion mo 99.4 2.3E-12 7.7E-17 92.4 8.7 81 9-97 206-290 (291)
157 2v44_A NCAM2, neural cell adhe 99.4 3.5E-12 1.2E-16 86.1 9.2 79 6-93 103-183 (189)
158 1bih_A Hemolin; insect immunit 99.4 5.9E-12 2E-16 93.9 11.1 76 9-95 319-394 (395)
159 2vr9_A Roundabout 1, ROBO; imm 99.4 2.6E-12 8.8E-17 88.5 8.4 83 6-97 115-206 (217)
160 2v5m_A Dscam; neurobiology SPL 99.4 7.3E-12 2.5E-16 93.3 11.4 75 5-95 313-387 (388)
161 2xot_A Amphoterin-induced prot 99.4 4.5E-12 1.6E-16 94.5 10.3 84 5-98 252-338 (361)
162 2y23_A Myomesin; structural pr 99.4 3.4E-12 1.2E-16 92.2 9.4 79 9-95 231-310 (312)
163 1cs6_A Axonin-1; neural cell a 99.4 1.7E-12 6E-17 96.5 8.0 124 6-148 214-380 (382)
164 3ejj_X Macrophage colony-stimu 99.4 1.4E-11 4.9E-16 88.1 12.5 90 6-99 193-283 (289)
165 1ccz_A Protein (CD58); LFA-3, 99.4 4.3E-12 1.5E-16 85.2 9.1 82 7-99 3-96 (171)
166 2y25_A Myomesin; structural pr 99.4 3E-12 1E-16 92.7 9.0 81 7-95 14-95 (317)
167 2x1w_L Vascular endothelial gr 99.4 1.2E-12 4.2E-17 90.4 6.4 72 6-86 14-89 (213)
168 4dkd_C Macrophage colony-stimu 99.4 2.1E-12 7.1E-17 92.6 7.8 84 5-97 95-181 (292)
169 2ny1_B T-cell surface glycopro 99.4 8.4E-12 2.9E-16 84.0 10.3 76 9-100 107-182 (184)
170 3ojm_B Fibroblast growth facto 99.3 7.4E-12 2.5E-16 86.7 10.1 97 6-103 125-227 (231)
171 1itb_B Type 1 interleukin-1 re 99.3 1.5E-11 5.3E-16 89.1 11.8 69 9-87 113-189 (315)
172 2ifg_A High affinity nerve gro 99.3 8.5E-12 2.9E-16 92.3 10.6 87 11-98 258-346 (347)
173 3dmk_A DOWN syndrome cell adhe 99.3 3.2E-11 1.1E-15 98.0 14.7 93 6-99 436-528 (816)
174 1wio_A CD4, T-cell surface gly 99.3 8.3E-12 2.8E-16 92.6 10.4 90 7-97 184-293 (363)
175 3p3y_A Neurofascin; IG domains 99.3 1.2E-11 4.2E-16 92.3 11.1 83 5-97 318-403 (404)
176 2o26_X MAST/stem cell growth f 99.3 6.5E-12 2.2E-16 90.2 9.2 81 6-96 98-182 (290)
177 1f2q_A High affinity immunoglo 99.3 1.1E-12 3.7E-17 88.0 4.5 75 2-92 7-82 (176)
178 2gi7_A GPVI protein; IG-like d 99.3 7.6E-12 2.6E-16 84.6 8.7 77 3-97 12-90 (184)
179 4dep_C Interleukin-1 receptor 99.3 1.1E-11 3.8E-16 91.2 10.1 80 8-97 129-217 (349)
180 3k0w_A Mucosa-associated lymph 99.3 9.3E-12 3.2E-16 86.2 9.1 79 5-98 124-203 (218)
181 1itb_B Type 1 interleukin-1 re 99.3 9E-12 3.1E-16 90.4 9.4 87 9-96 219-313 (315)
182 1epf_A NCAM, protein (neural c 99.3 6.8E-12 2.3E-16 84.7 8.1 82 5-95 106-189 (191)
183 3s97_C Contactin-1; carbonic a 99.3 5.4E-12 1.8E-16 85.6 7.5 76 5-88 14-93 (201)
184 1e07_A Carcinoembryonic antige 99.3 9.8E-12 3.3E-16 98.5 10.1 125 9-149 477-639 (642)
185 3mj6_A Junctional adhesion mol 99.3 8.9E-12 3E-16 88.4 8.9 91 2-96 8-121 (268)
186 2qsq_A Carcinoembryonic antige 99.3 8.8E-12 3E-16 78.1 7.8 86 3-97 4-109 (111)
187 3zyi_A Leucine-rich repeat-con 99.3 2.7E-12 9.2E-17 98.3 6.4 88 4-101 357-447 (452)
188 4fmk_A Poliovirus receptor-rel 99.3 1.3E-11 4.5E-16 84.6 9.2 84 6-89 8-111 (225)
189 2va4_A NCAM2, N-CAM 2, neural 99.3 4.3E-11 1.5E-15 80.6 11.6 81 10-95 105-191 (192)
190 3o4o_C Interleukin-1 receptor 99.3 3.2E-12 1.1E-16 93.8 6.2 86 3-98 22-118 (339)
191 1jhl_L IGG1-kappa D11.15 FV (l 99.3 5E-11 1.7E-15 73.9 10.7 78 2-84 4-94 (108)
192 1hnf_A CD2; T lymphocyte adhes 99.3 1.4E-11 4.7E-16 83.7 8.8 84 6-98 6-105 (182)
193 1pko_A Myelin oligodendrocyte 99.3 9.2E-11 3.2E-15 75.8 12.4 94 3-98 10-122 (139)
194 2y23_A Myomesin; structural pr 99.3 1.3E-10 4.6E-15 83.8 14.2 76 8-87 116-192 (312)
195 3nl4_L Antigen binding fragmen 99.3 3.5E-11 1.2E-15 82.7 10.5 91 2-97 4-110 (213)
196 2fbo_J V1V2;, variable region- 99.3 7.3E-12 2.5E-16 87.9 7.2 87 7-94 144-249 (250)
197 3mj8_L Stimulatory hamster ant 99.3 5.5E-11 1.9E-15 81.7 11.4 91 2-98 4-110 (213)
198 3khq_A B-cell antigen receptor 99.3 2.1E-11 7.3E-16 78.7 8.7 90 2-98 20-118 (133)
199 3r4d_A CEA-related cell adhesi 99.3 8.8E-12 3E-16 85.2 7.3 80 11-99 122-202 (208)
200 2c5d_C AXL oncogene, tyrosine- 99.3 2.3E-11 7.8E-16 82.5 9.0 78 5-95 112-191 (195)
201 3jz7_A MCAR, CAR, coxsackievir 99.3 2.3E-12 8E-17 88.1 4.0 78 11-97 133-212 (214)
202 4i0k_A CD276 antigen; immunogl 99.3 3.2E-11 1.1E-15 83.3 9.8 87 10-99 121-208 (222)
203 3oq3_B IFN-alpha/beta binding 99.3 4.7E-11 1.6E-15 87.5 11.2 78 11-98 140-225 (329)
204 3udw_C Poliovirus receptor; PV 99.3 2.9E-11 9.9E-16 75.6 8.7 92 6-98 7-117 (118)
205 1jbj_A CD3 epsilon and gamma e 99.3 8.7E-12 3E-16 84.6 6.7 68 10-94 10-78 (186)
206 2d3v_A Leukocyte immunoglobuli 99.3 1.4E-11 4.7E-16 84.0 7.8 86 3-97 9-96 (196)
207 3u83_A Poliovirus receptor-rel 99.3 4.3E-11 1.5E-15 87.3 10.9 138 6-154 139-324 (331)
208 4fom_A Poliovirus receptor-rel 99.3 3.7E-12 1.3E-16 92.3 5.1 130 12-153 127-303 (308)
209 4frw_A Poliovirus receptor-rel 99.3 1.6E-11 5.5E-16 83.8 8.0 83 9-96 128-210 (218)
210 2ocw_A Polymeric-immunoglobuli 99.3 3.7E-11 1.3E-15 94.1 11.1 88 5-97 337-441 (585)
211 3sbw_C Programmed cell death 1 99.3 4.5E-11 1.6E-15 82.4 10.3 86 10-98 127-212 (222)
212 3dmk_A DOWN syndrome cell adhe 99.3 3.3E-11 1.1E-15 97.9 10.8 76 5-96 349-424 (816)
213 1eaj_A Coxsackie virus and ade 99.3 1.4E-11 4.8E-16 77.7 6.8 92 4-97 10-125 (126)
214 1e07_A Carcinoembryonic antige 99.3 5.2E-11 1.8E-15 94.4 11.6 80 10-98 122-202 (642)
215 4frw_A Poliovirus receptor-rel 99.3 3.8E-11 1.3E-15 81.9 9.4 82 5-89 5-107 (218)
216 3ry4_A Low affinity immunoglob 99.3 6.9E-12 2.4E-16 83.3 5.4 71 2-88 7-78 (170)
217 2ocw_A Polymeric-immunoglobuli 99.2 7.4E-11 2.5E-15 92.4 11.9 91 5-99 6-113 (585)
218 1rhf_A Tyrosine-protein kinase 99.2 6.4E-11 2.2E-15 79.3 9.9 76 5-95 104-181 (182)
219 1uct_A Immunoglobulin alpha FC 99.2 1.6E-11 5.5E-16 85.5 7.0 87 2-97 12-102 (218)
220 3oq3_B IFN-alpha/beta binding 99.2 1.4E-10 4.7E-15 85.0 12.3 89 5-95 234-328 (329)
221 1wio_A CD4, T-cell surface gly 99.2 2.2E-11 7.6E-16 90.3 7.8 73 10-98 107-179 (363)
222 1ugn_A LIR1, leukocyte immunog 99.2 6.2E-12 2.1E-16 85.8 4.5 84 3-97 9-97 (198)
223 3sgj_C Human FCG3A receptor; r 99.2 4.2E-11 1.4E-15 82.5 8.7 82 9-104 98-181 (204)
224 4f80_A Butyrophilin subfamily 99.2 3.1E-11 1.1E-15 83.8 7.9 88 7-98 126-214 (226)
225 1ry7_B FGFR-3, fibroblast grow 99.2 5.3E-11 1.8E-15 87.0 9.1 93 7-100 230-330 (334)
226 4dep_C Interleukin-1 receptor 99.2 4.9E-11 1.7E-15 87.7 8.9 83 6-98 14-116 (349)
227 1z7z_I Intercellular adhesion 99.2 1.5E-11 5.3E-16 93.4 6.4 72 6-86 93-167 (450)
228 3q0h_A T cell immunoreceptor w 99.2 8.5E-11 2.9E-15 74.1 8.8 87 6-101 10-112 (117)
229 4gos_A V-SET domain-containing 99.2 3.8E-11 1.3E-15 76.7 7.2 92 2-95 8-118 (125)
230 4fom_A Poliovirus receptor-rel 99.2 4.2E-12 1.4E-16 92.0 3.1 81 9-100 222-303 (308)
231 3v2a_R Vascular endothelial gr 99.2 1.1E-12 3.8E-17 105.5 0.0 87 7-101 674-760 (772)
232 4dzb_B Vbeta2 (MAIT T cell rec 99.2 1.6E-10 5.4E-15 81.2 11.0 92 2-97 4-117 (246)
233 1oll_A NK receptor; immune sys 99.2 3.1E-11 1E-15 81.8 7.0 85 2-96 7-94 (188)
234 3rjd_A High affinity immunoglo 99.2 1.6E-10 5.3E-15 81.5 10.8 77 8-98 91-168 (262)
235 3d9a_L Light chain of hyhel10 99.2 1.1E-10 3.9E-15 80.1 9.5 91 2-97 4-108 (213)
236 3u83_A Poliovirus receptor-rel 99.2 3.6E-11 1.2E-15 87.7 7.3 77 11-99 244-322 (331)
237 1mqk_L Antibody 7E2 FV fragmen 99.2 2.3E-10 7.7E-15 72.5 10.1 92 2-98 4-110 (120)
238 1f97_A Junction adhesion molec 99.2 3.3E-11 1.1E-15 82.3 6.5 81 10-98 115-208 (212)
239 3s96_B 3B5H10 FAB light chain; 99.2 2.7E-10 9.1E-15 78.4 11.0 90 2-97 4-116 (218)
240 2rcj_C Light chain; immunoglob 99.2 1.9E-10 6.4E-15 89.1 11.3 82 10-92 125-209 (523)
241 1gsm_A Madcam-1, mucosal addre 99.2 3.4E-10 1.2E-14 78.5 11.4 79 9-99 17-97 (210)
242 4fqp_A Poliovirus receptor; im 99.2 3.8E-11 1.3E-15 87.2 6.8 132 11-152 129-306 (313)
243 1moe_A Anti-CEA MAB T84.66; an 99.2 1.9E-10 6.5E-15 80.4 10.0 93 2-99 4-114 (240)
244 3r06_A Anti-mouse CD3epsilon a 99.2 1.8E-10 6E-15 79.1 9.5 89 2-95 4-106 (213)
245 4i0k_A CD276 antigen; immunogl 99.2 4.7E-12 1.6E-16 87.5 1.4 74 8-83 4-94 (222)
246 2if7_A SLAM family member 6; N 99.2 1E-10 3.5E-15 79.7 8.1 86 3-97 2-106 (193)
247 3nfj_J T cell receptor beta ch 99.2 4E-10 1.4E-14 79.1 11.3 92 2-97 4-116 (245)
248 3o4o_C Interleukin-1 receptor 99.2 1.2E-10 4.3E-15 85.2 8.9 81 9-97 130-220 (339)
249 1fnl_A Low affinity immunoglob 99.2 2.7E-10 9.2E-15 76.2 9.7 75 9-97 98-174 (175)
250 3vh8_G Killer cell immunoglobu 99.2 2.8E-10 9.5E-15 82.8 10.6 81 11-97 130-215 (316)
251 1lk3_L 9D7 light chain; antige 99.2 2.3E-10 7.9E-15 78.5 9.5 87 6-97 7-107 (210)
252 2d9c_A Signal-regulatory prote 99.2 2.2E-10 7.6E-15 73.9 8.9 105 2-106 11-130 (136)
253 2dru_A Chimera of CD48 antigen 99.2 4E-10 1.4E-14 76.1 10.5 86 6-99 6-106 (180)
254 4dkd_C Macrophage colony-stimu 99.2 2.1E-10 7.2E-15 82.1 9.6 87 9-99 196-283 (292)
255 2pet_A Lutheran blood group gl 99.1 5.5E-11 1.9E-15 82.4 6.1 93 4-100 5-117 (231)
256 2q20_A VK1 O18/O8 germline lig 99.1 3.9E-10 1.3E-14 70.0 9.3 77 2-83 6-95 (109)
257 1xau_A B- and T-lymphocyte att 99.1 6.1E-10 2.1E-14 68.4 9.7 86 9-97 24-116 (122)
258 1xt5_A Variable region-contain 99.1 2.4E-10 8.4E-15 73.2 8.6 90 2-97 7-133 (135)
259 2ywz_A NEW antigen receptor va 99.1 4.4E-10 1.5E-14 70.0 9.4 78 2-82 3-87 (111)
260 1ugn_A LIR1, leukocyte immunog 99.1 3E-10 1E-14 77.3 9.4 82 9-96 110-197 (198)
261 2e27_L Anti-ciguatoxin antibod 99.1 3.5E-10 1.2E-14 71.5 9.0 77 2-83 6-95 (119)
262 3r08_E T-cell surface glycopro 99.1 1.4E-11 4.9E-16 72.8 2.2 61 5-82 5-66 (82)
263 3b5h_A Cervical EMMPRIN, HAB18 99.1 3.1E-10 1.1E-14 76.1 9.1 62 9-83 8-71 (184)
264 1q0x_L FAB 9B1, light chain; a 99.1 3.9E-10 1.3E-14 77.3 9.7 87 6-97 7-110 (212)
265 3mj6_A Junctional adhesion mol 99.1 9.5E-11 3.2E-15 83.1 6.8 91 6-99 125-239 (268)
266 2ghw_B Anti-SARS SCFV antibody 99.1 3.9E-10 1.3E-14 79.2 9.9 86 5-96 141-241 (247)
267 3sob_L Antibody light chain; b 99.1 5.1E-10 1.8E-14 77.8 10.3 90 3-97 28-131 (237)
268 1f2q_A High affinity immunoglo 99.1 1.9E-10 6.3E-15 77.0 7.7 77 9-99 95-173 (176)
269 2wng_A Tyrosine-protein phosph 99.1 1.8E-10 6E-15 84.2 8.2 96 2-98 6-116 (327)
270 3p2t_A Leukocyte immunoglobuli 99.1 3.5E-10 1.2E-14 76.9 9.2 70 10-85 110-179 (196)
271 3tv3_L PGT128 light chain, IG 99.1 4.9E-10 1.7E-14 76.8 9.8 87 3-97 5-106 (211)
272 2oz4_A Intercellular adhesion 99.1 5.6E-11 1.9E-15 84.4 5.2 73 6-97 192-264 (265)
273 1qfw_M FV, antibody (anti beta 99.1 3E-10 1E-14 70.4 7.8 78 2-84 4-94 (108)
274 2or8_A Hepatitis A virus cellu 99.1 4.3E-10 1.5E-14 70.2 8.5 91 4-97 2-111 (116)
275 3bp6_B Programmed cell death 1 99.1 6.1E-11 2.1E-15 80.8 4.9 80 11-98 115-194 (202)
276 1c1e_H Catalytic antibody 1E9 99.1 1.3E-09 4.5E-14 75.1 11.4 91 4-97 5-119 (219)
277 1f3r_B FV antibody fragment; I 99.1 1.3E-10 4.4E-15 82.5 6.4 87 6-98 146-246 (257)
278 3vh8_G Killer cell immunoglobu 99.1 3.8E-11 1.3E-15 87.4 3.7 69 3-83 28-96 (316)
279 1h5b_A Murine T cell receptor 99.1 8.4E-10 2.9E-14 68.9 9.4 81 2-85 4-95 (113)
280 3esu_F Antibody 14B7* light ch 99.1 5.5E-10 1.9E-14 78.5 9.6 91 2-97 7-111 (250)
281 3ry4_A Low affinity immunoglob 99.1 2.5E-10 8.5E-15 75.7 7.4 73 9-95 95-169 (170)
282 1i8k_A Epidermal growth factor 99.1 3.4E-10 1.2E-14 70.1 7.5 77 2-83 4-93 (107)
283 1sy6_A T-cell surface glycopro 99.1 6.7E-11 2.3E-15 81.4 4.7 73 12-95 126-202 (204)
284 1p6f_A NKP46, natural cytotoxi 99.1 4.7E-10 1.6E-14 79.3 9.1 86 2-97 10-98 (242)
285 2rcj_C Light chain; immunoglob 99.1 8.9E-10 3E-14 85.3 11.4 89 3-96 4-108 (523)
286 3umt_A SCFV heavy chain and li 99.1 5.4E-10 1.9E-14 79.0 9.3 89 5-98 144-246 (256)
287 3v2a_R Vascular endothelial gr 99.1 2.1E-09 7.2E-14 86.5 13.8 92 7-99 232-328 (772)
288 2wng_A Tyrosine-protein phosph 99.1 1.7E-10 5.8E-15 84.2 6.7 77 11-88 232-310 (327)
289 4ffy_L DENV1-E111 single chain 99.1 8.7E-10 3E-14 70.3 9.1 92 2-98 4-113 (126)
290 1dr9_A B7-1 (CD80), T lymphocy 99.1 1.4E-09 4.7E-14 74.0 10.6 77 12-93 119-197 (201)
291 2znx_A SCFV; fluorotryptohpan, 99.1 6.2E-10 2.1E-14 78.2 9.0 91 2-97 4-108 (242)
292 2coq_A NEW antigen receptor va 99.1 8.2E-10 2.8E-14 68.4 8.5 78 2-82 3-87 (108)
293 1zox_A CLM-1; IG-superfamily, 99.1 3.2E-09 1.1E-13 66.1 11.3 91 5-98 7-111 (113)
294 3uzq_A Anti-dengue MAB 4E11; d 99.1 3.8E-10 1.3E-14 79.7 7.8 91 5-100 139-247 (253)
295 2ptt_A CD48 antigen; CD244, CD 99.1 6.8E-10 2.3E-14 68.9 8.1 84 6-97 10-108 (110)
296 4hwn_A FC receptor-like A; FCR 99.1 4E-10 1.4E-14 70.0 7.0 73 11-97 19-99 (108)
297 1svz_A Immunoglobulin;, single 99.1 8.6E-10 3E-14 77.5 9.5 91 2-97 4-113 (247)
298 1nbq_A JAM, junctional adhesio 99.1 2.8E-11 9.7E-16 82.4 1.7 79 9-95 117-207 (209)
299 1hng_A CD2; T lymphocyte adhes 99.1 1.1E-10 3.6E-15 78.6 4.4 66 13-95 109-174 (176)
300 1jbj_A CD3 epsilon and gamma e 99.1 6.8E-11 2.3E-15 80.1 3.4 60 12-87 120-179 (186)
301 3mj8_L Stimulatory hamster ant 99.1 7.2E-11 2.5E-15 81.1 3.5 79 13-92 128-208 (213)
302 2zg1_A Sialic acid-binding IG- 99.1 1.1E-09 3.9E-14 74.9 9.5 90 5-98 6-123 (214)
303 4ei6_B Vbeta16 XV19 type II na 99.1 2.3E-09 7.9E-14 75.1 11.2 91 2-97 5-116 (245)
304 3auv_A SC-DSFV derived from th 99.1 8.5E-10 2.9E-14 79.0 9.1 80 2-86 15-107 (276)
305 2p1y_A Bispecific alpha/beta T 99.1 1.4E-09 4.7E-14 75.9 9.9 77 5-84 133-222 (238)
306 3rrq_A Protein PD-1, programme 99.0 1.7E-09 6E-14 69.2 9.3 94 3-99 5-117 (129)
307 1neu_A Myelin P0 protein; stru 99.0 2.5E-09 8.5E-14 67.4 9.9 92 5-99 5-121 (124)
308 2c1o_A IGK-C protein; FAB frag 99.0 1.3E-09 4.4E-14 76.8 9.5 89 3-96 42-149 (254)
309 1i3g_L Antibody FV fragment; a 99.0 1.5E-09 5.1E-14 67.6 8.6 77 2-83 7-96 (111)
310 1nkr_A P58-CL42 KIR; inhibitor 99.0 2.1E-09 7.1E-14 73.4 10.1 83 9-97 17-104 (201)
311 3moq_A NEW antigen receptor va 99.0 3.6E-09 1.2E-13 67.6 10.5 81 2-85 3-90 (126)
312 1nfd_E H57 FAB; complex (immun 99.0 8.6E-10 2.9E-14 75.6 8.1 73 6-83 6-91 (212)
313 2oz4_A Intercellular adhesion 99.0 1.1E-09 3.9E-14 77.6 8.9 117 9-150 108-264 (265)
314 2oyp_A Hepatitis A virus cellu 99.0 9E-10 3.1E-14 67.8 7.3 86 8-96 3-107 (109)
315 3bkj_L WO2 IGG2A FAB fragment 99.0 1.6E-09 5.4E-14 76.4 9.5 90 3-97 38-146 (252)
316 1mju_H Immunoglobulin MS6-12; 99.0 7.2E-09 2.5E-13 72.2 12.6 77 5-84 6-102 (227)
317 2pet_A Lutheran blood group gl 99.0 3.6E-10 1.2E-14 78.2 6.0 72 11-83 130-211 (231)
318 3juy_B 3B3 single chain varian 99.0 1.9E-09 6.3E-14 76.3 9.7 78 4-86 154-245 (256)
319 2jju_A Signal regulatory prote 99.0 1.4E-09 4.9E-14 69.3 8.3 83 2-84 6-97 (127)
320 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 2.8E-09 9.4E-14 75.5 10.5 81 2-85 6-100 (256)
321 1nqb_A Single-chain antibody f 99.0 2.1E-09 7.3E-14 76.2 9.9 87 5-97 127-233 (256)
322 2p1y_A Bispecific alpha/beta T 99.0 2E-09 6.8E-14 75.1 9.6 79 2-85 3-97 (238)
323 1uct_A Immunoglobulin alpha FC 99.0 4.9E-10 1.7E-14 77.9 6.4 80 10-99 116-200 (218)
324 3u6r_L Antibody 1:7 (light cha 99.0 3.6E-09 1.2E-13 69.1 10.1 93 2-99 3-108 (143)
325 3gkz_A Anti-methamphetamine si 99.0 2.5E-09 8.5E-14 75.6 9.9 90 5-99 147-251 (257)
326 2d3v_A Leukocyte immunoglobuli 99.0 2.6E-10 8.9E-15 77.6 4.6 71 10-85 110-180 (196)
327 1j05_L T84.66 antibody, anti-C 99.0 8.7E-10 3E-14 68.6 6.6 77 2-83 4-97 (111)
328 1vca_A VCAM-D1,2, human vascul 99.0 1.4E-09 4.9E-14 74.6 8.3 88 10-99 102-199 (202)
329 1sq2_N Novel antigen receptor; 99.0 2.1E-09 7.3E-14 67.2 8.4 79 2-83 3-88 (113)
330 3pv7_A B7-H6, IG-like domain-c 99.0 2.1E-09 7.3E-14 75.4 9.4 94 5-98 9-119 (248)
331 1eeq_A Kappa-4 immunoglobulin 99.0 2.4E-09 8.1E-14 66.9 8.5 77 2-83 4-99 (114)
332 1z7z_I Intercellular adhesion 99.0 1.7E-09 5.7E-14 82.1 9.3 81 9-98 198-283 (450)
333 2vsd_A CHIR AB1; immune system 99.0 1.1E-10 3.9E-15 72.2 2.3 71 3-84 9-79 (105)
334 2v5y_A Receptor-type tyrosine- 99.0 1.9E-09 6.4E-14 87.0 9.9 89 6-100 171-263 (731)
335 1qok_A MFE-23 recombinant anti 99.0 2.3E-09 7.9E-14 77.0 9.4 85 6-97 169-268 (282)
336 3q5y_A TCR N15 beta; IG, T cel 99.0 5.5E-09 1.9E-13 73.0 11.1 91 2-97 5-114 (240)
337 1za6_B IGG heavy chain; immuno 99.0 3.3E-09 1.1E-13 78.2 10.2 90 5-97 6-115 (344)
338 3d9a_H Heavy chain of hyhel10 99.0 3E-09 1E-13 72.9 9.4 89 5-97 6-113 (210)
339 3d9a_L Light chain of hyhel10 99.0 1.4E-10 4.7E-15 79.6 2.6 75 13-88 126-204 (213)
340 2gjj_A A21 single-chain antibo 99.0 3E-09 1E-13 75.9 9.6 92 2-98 8-119 (264)
341 3pl6_D MBP peptide / T-cell re 99.0 4.4E-09 1.5E-13 74.7 10.5 89 4-97 31-138 (268)
342 1dr9_A B7-1 (CD80), T lymphocy 99.0 6.3E-10 2.2E-14 75.7 5.8 85 8-99 3-108 (201)
343 2yc1_B Single chain antibody f 99.0 5.3E-09 1.8E-13 68.5 10.0 92 2-98 19-124 (146)
344 1oll_A NK receptor; immune sys 99.0 6.1E-10 2.1E-14 75.4 5.7 76 10-96 109-187 (188)
345 1f3r_B FV antibody fragment; I 99.0 2.8E-09 9.6E-14 75.5 9.3 78 5-85 6-102 (257)
346 2q87_A CMRF35-H antigen; all-b 99.0 5.1E-09 1.8E-13 64.9 9.3 76 6-84 3-91 (110)
347 1op3_H FAB 2G12, heavy chain; 99.0 8.6E-09 2.9E-13 71.6 11.4 78 5-85 6-103 (225)
348 1ncn_A T lymphocyte activation 99.0 3.6E-09 1.2E-13 65.5 8.5 78 8-92 3-100 (110)
349 2xzc_L FAB A.17 light chain; i 99.0 2.8E-09 9.4E-14 73.3 8.6 75 6-85 7-96 (216)
350 2gi7_A GPVI protein; IG-like d 99.0 4.6E-10 1.6E-14 75.7 4.5 64 11-85 105-168 (184)
351 2ghw_B Anti-SARS SCFV antibody 99.0 4.6E-09 1.6E-13 73.6 9.6 76 6-84 9-104 (247)
352 3ux9_B SCFV antibody; five hel 99.0 4.5E-09 1.5E-13 74.1 9.6 89 5-98 8-114 (256)
353 1q9r_B S25-2 FAB (IGG1K) heavy 99.0 1E-09 3.5E-14 75.9 6.0 77 12-92 140-218 (222)
354 1i1r_A GP130, interleukin-6 re 99.0 6E-09 2E-13 75.5 10.3 89 4-102 9-107 (303)
355 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 8.8E-09 3E-13 72.9 10.9 90 4-98 142-249 (256)
356 1lk3_L 9D7 light chain; antige 99.0 3.9E-10 1.3E-14 77.3 3.7 74 13-87 125-202 (210)
357 1dlf_L Anti-dansyl immunoglobu 99.0 8.8E-09 3E-13 64.2 9.6 77 2-83 4-98 (113)
358 2gki_A Nuclease; anti-DNA anti 98.9 6E-09 2.1E-13 75.3 9.9 89 6-99 166-274 (291)
359 1nqb_A Single-chain antibody f 98.9 6.2E-09 2.1E-13 73.8 9.8 79 4-85 5-103 (256)
360 3o3u_N Maltose-binding peripla 98.9 8.6E-10 3E-14 86.5 5.7 86 6-100 373-472 (581)
361 2wbj_D OB TCR; transmembrane, 98.9 7.2E-09 2.5E-13 74.3 10.1 77 3-83 28-122 (279)
362 1qok_A MFE-23 recombinant anti 98.9 7.9E-09 2.7E-13 74.2 10.3 79 4-85 31-129 (282)
363 3omz_A Human vdelta1 gamma del 98.9 3.3E-09 1.1E-13 75.1 8.1 92 3-97 6-118 (259)
364 2edo_A CD48 antigen; beta-sand 98.9 1E-09 3.4E-14 69.6 4.8 92 5-103 10-116 (121)
365 1qgc_4 Protein (immunoglobulin 98.9 4.5E-09 1.5E-13 79.4 9.3 80 2-86 4-100 (438)
366 1hxm_B Gamma-delta T-cell rece 98.9 1.2E-08 4.2E-13 71.6 10.9 93 3-98 5-124 (242)
367 1q0x_L FAB 9B1, light chain; a 98.9 9.4E-10 3.2E-14 75.4 5.0 75 13-88 129-206 (212)
368 2rgs_A I, IG gamma-2B heavy ch 98.9 8.4E-10 2.9E-14 76.5 4.8 76 11-87 23-102 (218)
369 2d9q_B Granulocyte colony-stim 98.9 1.1E-09 3.6E-14 79.9 5.5 92 5-102 6-102 (313)
370 4gjt_B Poliovirus receptor-rel 98.9 1.9E-09 6.4E-14 68.4 6.0 92 5-98 6-118 (123)
371 1n26_A IL-6 receptor alpha cha 98.9 3.4E-09 1.2E-13 77.7 8.2 86 4-102 11-98 (325)
372 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 8.1E-09 2.8E-13 71.3 9.5 90 5-97 6-122 (222)
373 3mjg_X Beta-type platelet-deri 98.9 3E-09 1E-13 76.1 7.5 84 2-96 3-89 (289)
374 1x9q_A SCFV, 4M5.3 anti-fluore 98.9 3.5E-09 1.2E-13 75.4 7.8 90 3-97 19-127 (268)
375 3auv_A SC-DSFV derived from th 98.9 1.1E-08 3.7E-13 73.2 10.3 90 7-99 142-256 (276)
376 3pv7_A B7-H6, IG-like domain-c 98.9 6.6E-09 2.3E-13 72.9 9.1 83 12-95 131-224 (248)
377 2xzc_L FAB A.17 light chain; i 98.9 2.3E-09 7.8E-14 73.7 6.4 75 13-88 128-206 (216)
378 1pz5_B Heavy chain of FAB (SYA 98.9 1.6E-08 5.6E-13 69.7 10.7 90 5-97 6-120 (220)
379 3bqu_C 3H6 FAB light chain; be 98.9 8.5E-10 2.9E-14 76.7 4.0 77 4-85 28-117 (233)
380 3s96_B 3B5H10 FAB light chain; 98.9 7E-10 2.4E-14 76.2 3.5 78 13-91 135-214 (218)
381 2c1o_A IGK-C protein; FAB frag 98.9 6.4E-10 2.2E-14 78.4 3.3 74 13-87 168-245 (254)
382 3r0n_A Poliovirus receptor-rel 98.9 9E-09 3.1E-13 65.4 8.3 91 5-95 8-128 (128)
383 3uzq_A Anti-dengue MAB 4E11; d 98.9 4.2E-09 1.4E-13 74.3 7.4 91 3-96 5-116 (253)
384 1nko_A Sialic acid binding IG- 98.9 1.4E-08 4.6E-13 65.0 9.2 93 5-100 12-130 (132)
385 3tv3_L PGT128 light chain, IG 98.9 6.2E-10 2.1E-14 76.3 2.9 78 13-91 125-205 (211)
386 3kg5_A B-cell antigen receptor 98.9 2.9E-08 9.9E-13 64.0 10.6 90 3-98 22-120 (134)
387 1mju_H Immunoglobulin MS6-12; 98.9 2.1E-09 7.2E-14 74.9 5.6 86 11-102 133-222 (227)
388 1pew_A JTO2, A lambda-6 type i 98.9 1E-08 3.5E-13 63.5 8.2 74 6-83 7-94 (109)
389 3gkz_A Anti-methamphetamine si 98.9 1.6E-08 5.4E-13 71.4 10.2 76 5-83 14-108 (257)
390 3bae_H WO2 IGG2A FAB fragment 98.9 7.9E-09 2.7E-13 71.9 8.4 77 6-85 7-104 (228)
391 1u3h_A T-cell receptor alpha-c 98.4 1.8E-10 6.2E-15 71.7 0.0 78 3-83 3-93 (110)
392 1qgc_4 Protein (immunoglobulin 98.9 1.6E-08 5.4E-13 76.4 10.6 89 6-97 225-338 (438)
393 1c1e_H Catalytic antibody 1E9 98.9 9.5E-10 3.3E-14 75.8 3.5 78 12-93 137-216 (219)
394 1nfd_E H57 FAB; complex (immun 98.9 7.9E-11 2.7E-15 80.9 -2.0 73 13-87 127-202 (212)
395 2yz1_A Tyrosine-protein phosph 98.9 3.4E-09 1.2E-13 66.7 5.8 83 2-84 10-101 (120)
396 2aw2_A B and T lymphocyte atte 98.9 3.7E-08 1.3E-12 59.9 9.8 87 9-97 21-110 (120)
397 3qib_D 2B4 beta chain; IG doma 98.9 1.8E-08 6E-13 71.7 10.1 90 3-97 31-141 (270)
398 3nl4_H Antigen binding fragmen 98.9 2.9E-08 9.9E-13 68.2 10.9 77 4-85 4-99 (215)
399 1bec_A 14.3.D T cell antigen r 98.9 3E-08 1E-12 69.4 11.0 78 2-84 2-95 (238)
400 1p6f_A NKP46, natural cytotoxi 98.9 3.9E-09 1.3E-13 74.6 6.5 85 10-105 112-199 (242)
401 2j6e_L IGM, FAB light chain; a 98.9 2.6E-09 9E-14 74.2 5.5 75 6-85 26-115 (234)
402 2zg1_A Sialic acid-binding IG- 98.9 3.9E-09 1.3E-13 72.3 6.3 72 11-94 135-212 (214)
403 3umt_A SCFV heavy chain and li 98.9 1.1E-08 3.7E-13 72.3 8.7 90 5-97 8-121 (256)
404 1oaq_L Light chain; antibody, 98.9 9.8E-09 3.3E-13 64.7 7.6 90 3-98 5-111 (120)
405 2or7_A T-cell immunoglobulin a 98.9 1.2E-08 4.2E-13 63.7 8.0 91 5-98 3-111 (115)
406 1tvd_A T cell receptor, ES204 98.9 1.4E-08 4.6E-13 63.6 8.2 79 2-83 3-98 (116)
407 2vol_A Murine IGG FC; FC, zinc 98.9 1.1E-09 3.9E-14 75.1 3.3 76 11-87 15-94 (207)
408 2qhl_A Novel immune-type recep 98.9 9.5E-09 3.3E-13 63.9 7.2 76 3-83 3-98 (111)
409 3to4_D NKT vbeta2 (mouse varia 98.9 8.5E-09 2.9E-13 72.8 7.8 78 2-85 4-98 (253)
410 1dn0_B IGM-kappa cold agglutin 98.8 2.2E-08 7.4E-13 70.0 9.6 83 12-96 138-226 (232)
411 2xqy_G A13-D6.3 monoclonal ant 98.8 4.5E-08 1.5E-12 69.8 11.4 77 5-84 12-108 (261)
412 1dee_B IGM RF 2A2; FAB-IBP com 98.8 2.8E-08 9.5E-13 68.9 10.0 77 6-85 7-103 (223)
413 3sob_L Antibody light chain; b 98.8 1.4E-09 4.7E-14 75.6 3.3 76 13-89 149-228 (237)
414 2i24_N NEW antigen receptor PB 98.8 3.2E-08 1.1E-12 62.7 9.3 78 2-82 3-87 (121)
415 3r06_A Anti-mouse CD3epsilon a 98.8 2E-09 6.9E-14 73.7 3.9 74 13-87 126-203 (213)
416 2if7_A SLAM family member 6; N 98.8 1.4E-08 5E-13 68.9 8.2 63 13-92 122-187 (193)
417 2fbj_H IGA-kappa J539 FAB (hea 98.8 4.6E-08 1.6E-12 67.7 10.8 90 5-97 6-118 (220)
418 3d9a_H Heavy chain of hyhel10 98.8 2.1E-09 7E-14 73.7 3.8 72 12-89 131-206 (210)
419 2z35_A T-cell receptor alpha-c 98.8 2.8E-08 9.5E-13 61.8 8.5 76 3-81 4-92 (112)
420 3esu_F Antibody 14B7* light ch 98.8 2.1E-08 7.2E-13 70.4 8.9 73 7-82 139-231 (250)
421 1pz5_B Heavy chain of FAB (SYA 98.8 3.5E-09 1.2E-13 73.1 4.7 76 11-92 137-216 (220)
422 1fo0_A Protein (BM3.3 T cell r 98.8 3.2E-08 1.1E-12 61.9 8.7 78 2-82 3-95 (116)
423 3nl4_L Antigen binding fragmen 98.8 2.6E-09 8.9E-14 73.2 4.0 68 13-81 128-198 (213)
424 3eow_R Poliovirus receptor; im 98.8 4.4E-09 1.5E-13 72.5 5.1 80 12-94 128-209 (221)
425 2nms_A CMRF35-like-molecule 1; 98.8 2.3E-07 8E-12 58.8 12.8 95 5-102 8-116 (124)
426 3liz_H 4C3 monoclonal antibody 98.8 6.9E-08 2.3E-12 68.2 11.4 76 5-83 6-101 (253)
427 3bj9_1 Immunoglobulin IOTA cha 98.8 9E-08 3.1E-12 59.7 10.6 79 2-84 2-100 (116)
428 1c5d_H Monoclonal antibody aga 98.8 3.3E-08 1.1E-12 68.1 9.3 89 6-97 7-117 (215)
429 3juy_B 3B3 single chain varian 98.8 2.7E-08 9.2E-13 70.2 9.1 77 4-83 11-107 (256)
430 1nkr_A P58-CL42 KIR; inhibitor 98.8 1.6E-08 5.6E-13 68.9 7.7 66 10-83 118-183 (201)
431 1dee_B IGM RF 2A2; FAB-IBP com 98.8 1.9E-08 6.6E-13 69.7 8.1 78 12-91 139-221 (223)
432 1b6u_A KIR2DL3, P58 killer cel 98.8 2.4E-08 8.3E-13 71.1 8.8 87 4-97 12-103 (257)
433 1i1c_A IGG2A, IG gamma-2A chai 98.8 2.1E-09 7.3E-14 75.7 3.2 76 11-87 29-108 (239)
434 3bp6_A Programmed cell death p 98.8 1.1E-07 3.7E-12 59.6 10.7 93 2-97 2-113 (117)
435 3eow_R Poliovirus receptor; im 98.8 1.9E-09 6.6E-14 74.4 2.7 90 6-96 6-114 (221)
436 2znx_A SCFV; fluorotryptohpan, 98.8 4.9E-08 1.7E-12 68.4 9.9 72 9-83 132-222 (242)
437 3ux9_B SCFV antibody; five hel 98.8 3.8E-08 1.3E-12 69.3 9.4 73 9-84 144-236 (256)
438 3m8o_H Immunoglobulin A1 heavy 98.8 1.3E-07 4.4E-12 65.2 11.8 89 5-96 6-118 (221)
439 2w59_A IGY FCU3-4; immunoglobu 98.8 3.5E-09 1.2E-13 74.1 3.7 76 10-87 24-103 (231)
440 2fbj_H IGA-kappa J539 FAB (hea 98.8 1.3E-08 4.6E-13 70.4 6.6 75 12-88 135-212 (220)
441 1svz_A Immunoglobulin;, single 98.8 5.8E-08 2E-12 68.0 10.0 72 9-83 137-228 (247)
442 2otu_A FV light chain variable 98.8 8.4E-08 2.9E-12 59.9 9.6 74 6-84 8-99 (115)
443 1moe_A Anti-CEA MAB T84.66; an 98.8 4.2E-08 1.4E-12 68.3 9.0 75 6-83 126-220 (240)
444 3fku_X Neutralizing antibody F 98.8 2.4E-08 8.4E-13 71.7 8.0 86 9-99 149-252 (280)
445 3bn9_D E2 FAB heavy chain; ant 98.8 6.8E-08 2.3E-12 68.7 10.2 78 5-85 6-103 (257)
446 1igt_B IGG2A intact antibody - 98.8 6.3E-08 2.1E-12 73.5 10.6 91 4-97 5-118 (444)
447 3bae_H WO2 IGG2A FAB fragment 98.8 2.1E-08 7E-13 69.8 7.4 78 11-92 142-221 (228)
448 3bik_B Programmed cell death p 98.8 2.3E-07 7.8E-12 59.6 11.8 94 3-99 13-125 (134)
449 2wqr_A IG epsilon chain C regi 98.8 8E-09 2.8E-13 75.4 5.5 75 15-91 25-102 (323)
450 1igt_B IGG2A intact antibody - 98.8 8.2E-09 2.8E-13 78.4 5.6 75 12-87 253-331 (444)
451 2j6e_L IGM, FAB light chain; a 98.8 3.1E-09 1.1E-13 73.8 2.9 78 13-91 149-229 (234)
452 1ypz_E T cell receptor delta, 98.8 1.6E-07 5.5E-12 64.5 11.6 80 2-84 4-94 (207)
453 2wqr_A IG epsilon chain C regi 98.8 4.3E-09 1.5E-13 76.8 3.7 76 11-87 125-204 (323)
454 1hzh_H IGG, immunoglobulin hea 98.8 6.6E-08 2.3E-12 73.7 10.4 79 4-85 5-103 (457)
455 1fo0_B Protein (BM3.3 T cell r 98.8 6.1E-08 2.1E-12 60.3 8.4 75 3-83 5-96 (112)
456 2h32_A Immunoglobulin IOTA cha 98.8 4E-08 1.4E-12 62.5 7.7 89 6-97 7-115 (126)
457 4fmk_A Poliovirus receptor-rel 98.7 2.1E-08 7.2E-13 68.4 6.8 84 12-98 134-220 (225)
458 3bkj_L WO2 IGG2A FAB fragment 98.7 3.1E-09 1.1E-13 74.9 2.5 74 13-87 164-241 (252)
459 2vol_A Murine IGG FC; FC, zinc 98.7 5.2E-09 1.8E-13 71.8 3.5 73 13-86 123-197 (207)
460 3r8b_B G5-8, enterotoxin type 98.7 3.3E-07 1.1E-11 58.1 11.2 78 2-83 8-101 (125)
461 2atp_B T-cell surface glycopro 98.7 9.4E-08 3.2E-12 59.6 8.5 78 3-83 2-101 (115)
462 1l6x_A Immunoglobulin gamma-1 98.7 8.9E-09 3E-13 70.6 4.0 75 12-87 16-94 (207)
463 2rgs_A I, IG gamma-2B heavy ch 98.7 4.3E-09 1.5E-13 72.8 2.4 73 13-86 131-205 (218)
464 3t0v_A Immunoglobulin variable 98.7 1.7E-07 5.8E-12 59.4 9.7 74 6-84 7-95 (123)
465 1iga_A IGA1; immunoglobulin; N 98.7 4.9E-08 1.7E-12 74.9 8.4 80 11-93 259-341 (475)
466 3bqu_C 3H6 FAB light chain; be 98.7 2.5E-09 8.6E-14 74.3 1.0 72 13-85 148-223 (233)
467 3noi_A Natural cytotoxicity tr 98.7 4.7E-08 1.6E-12 61.5 6.7 79 5-83 13-103 (120)
468 1x9q_A SCFV, 4M5.3 anti-fluore 98.7 9.6E-08 3.3E-12 67.9 9.0 74 7-83 159-254 (268)
469 1p4b_L Antibody variable light 98.7 8.4E-08 2.9E-12 61.9 7.8 73 7-84 13-101 (135)
470 1dn0_B IGM-kappa cold agglutin 98.7 1.7E-07 5.8E-12 65.4 9.9 74 6-82 7-99 (232)
471 2gjj_A A21 single-chain antibo 98.7 1.2E-07 4.3E-12 67.4 9.4 72 9-83 148-239 (264)
472 1oga_E TRBC1, T-cell receptor 98.7 1.9E-07 6.5E-12 65.8 10.2 77 2-83 6-98 (252)
473 1hnf_A CD2; T lymphocyte adhes 98.7 1.3E-07 4.4E-12 63.9 8.8 65 13-94 114-178 (182)
474 1u9k_A Triggering receptor exp 98.7 3.8E-07 1.3E-11 56.8 10.4 79 4-85 4-100 (114)
475 1op3_H FAB 2G12, heavy chain; 98.7 9.9E-09 3.4E-13 71.2 2.8 74 12-88 141-216 (225)
476 3fku_X Neutralizing antibody F 98.6 9.9E-08 3.4E-12 68.5 7.7 75 6-83 7-101 (280)
477 2hp4_A T-cell surface glycopro 98.6 9.6E-08 3.3E-12 59.6 6.7 77 2-83 3-99 (114)
478 1b6u_A KIR2DL3, P58 killer cel 98.6 2.6E-08 8.9E-13 71.0 4.6 81 11-99 118-203 (257)
479 3m8o_H Immunoglobulin A1 heavy 98.6 9.8E-08 3.3E-12 65.8 7.4 75 12-87 136-213 (221)
480 1ypz_F T-cell receptor gamma c 98.6 1.9E-07 6.4E-12 65.1 8.8 79 2-83 4-101 (230)
481 3liz_H 4C3 monoclonal antibody 98.6 6E-08 2E-12 68.5 6.3 82 11-96 136-219 (253)
482 1ccz_A Protein (CD58); LFA-3, 98.6 5.2E-08 1.8E-12 65.1 5.6 60 17-93 108-167 (171)
483 2dru_A Chimera of CD48 antigen 98.6 6.8E-08 2.3E-12 65.0 6.1 63 13-93 114-177 (180)
484 1l6x_A Immunoglobulin gamma-1 98.6 1.3E-08 4.6E-13 69.7 2.6 72 14-86 124-197 (207)
485 4dzb_B Vbeta2 (MAIT T cell rec 98.6 8.9E-09 3E-13 72.1 1.7 75 13-88 139-222 (246)
486 1iga_A IGA1; immunoglobulin; N 98.6 3.7E-07 1.3E-11 70.0 10.8 79 4-85 6-104 (475)
487 1olz_A Semaphorin 4D; developm 98.6 2.9E-08 1E-12 79.4 4.6 83 7-99 541-629 (663)
488 2jjs_C Leukocyte surface antig 98.6 2.4E-08 8.2E-13 63.5 3.3 93 9-102 11-120 (127)
489 3kgr_A LAIR-1, hlair1, leukocy 98.6 4.1E-07 1.4E-11 56.0 8.9 87 3-97 13-103 (106)
490 2gki_A Nuclease; anti-DNA anti 98.6 1.1E-07 3.9E-12 68.5 7.2 76 6-84 29-124 (291)
491 1j05_H T84.66 antibody, anti-C 98.6 5.5E-07 1.9E-11 56.6 9.6 76 5-83 6-101 (121)
492 1hkf_A NKP44, NK cell activati 98.6 1.1E-06 3.7E-11 55.5 10.9 78 4-84 15-107 (122)
493 2eys_A NKT15; natural killer T 98.6 1.5E-06 5.1E-11 60.1 12.5 78 3-83 7-97 (210)
494 3b9v_A Heavy chain variable do 98.6 3.8E-07 1.3E-11 57.3 8.7 75 6-83 7-101 (120)
495 2oi9_C V beta, T cell receptor 98.6 5.1E-07 1.7E-11 57.0 9.2 77 2-83 4-96 (121)
496 2wzp_D Camelid VHH5; baseplate 98.6 5.5E-07 1.9E-11 56.8 9.3 75 6-83 7-101 (123)
497 1n4x_H Immunoglobulin heavy ch 98.6 8.2E-07 2.8E-11 55.7 10.1 75 6-83 7-101 (120)
498 2yc1_A Single chain antibody f 98.6 3.5E-07 1.2E-11 57.1 8.3 75 6-83 7-101 (117)
499 3omz_A Human vdelta1 gamma del 98.6 1.9E-07 6.3E-12 66.0 7.7 92 5-99 142-252 (259)
500 1sy6_A T-cell surface glycopro 98.6 3.4E-08 1.2E-12 67.8 3.7 56 12-83 16-71 (204)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.81 E-value=3.9e-19 Score=111.26 Aligned_cols=91 Identities=20% Similarity=0.294 Sum_probs=77.3
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...++.+.+.+|+.+.|.|.+.|.|.|.+.|+|+ +..+..+.++.+...+ ..+.|.|.+++.+|+|.|+|.|.|
T Consensus 17 ~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~-g~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 17 LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADG-----AEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEET-----TEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEEC-cccccceeeEEEeecC-----ceEEEEEecCChhhCEEEEEEEEE
Confidence 4456778899999999999999999999999999 8888877777765544 134799999999999999999999
Q ss_pred CCCceEEEEEEEEeccC
Q psy16261 83 TLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~ 99 (158)
..|.....+.|.|..+|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999999999887643
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.78 E-value=5.2e-18 Score=104.80 Aligned_cols=89 Identities=22% Similarity=0.330 Sum_probs=74.7
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC--CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG--SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+... .++.+.... ..++|.|.+++.+|+|.|+|.|
T Consensus 9 ~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~-g~~i~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 9 EALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTD-----DLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CCCCSEEEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECS-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred EeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEEC-ceEeeeeccceeeeeccc-----ceEEEEEcCCCccCCEEEEEEE
Confidence 3456778899999999999999999999999999 8877654 356555443 1347999999999999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|..+..+.|.|..
T Consensus 83 ~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCEEEEEEEEEEEE
Confidence 99999999999988864
No 3
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=2.6e-17 Score=103.64 Aligned_cols=95 Identities=14% Similarity=0.113 Sum_probs=79.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...++.+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.... ..+.|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 11 IQFPEDQKVRAGESVELFGKVTGTQPITCTWMKF-RKQIQESEHMKVENSE-----NGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp SCCCCSEEEETTCCEEEEEEEESSSSCEEEEEES-SSBCCCSSSEEEEECS-----SEEEEEETTCCTTTCEEEEEEEEC
T ss_pred EeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEEC-CEECcCCCCEEEEEcC-----CEEEEEECCCChhcCEEEEEEEEE
Confidence 3456677899999999999999999999999999 7777766677666432 134799999999999999999999
Q ss_pred CCCceEEEEEEEEeccCCCCC
Q psy16261 83 TLGGSEGVIKVYNIGYFGSDT 103 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~~~~~ 103 (158)
..|.....+.|.|...+..+.
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp SSCEEECCEEEEEECSCSCCC
T ss_pred CCCcEEEEEEEEEECCCCCCC
Confidence 999998899999988765543
No 4
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.74 E-value=1.2e-16 Score=98.65 Aligned_cols=90 Identities=20% Similarity=0.207 Sum_probs=76.1
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.... ..+.|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 12 TLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHN-GVELQESSKIHYTNTS-----GVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp EECCCCEEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EeCCcceEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCEEEEECC-----CEEEEEEcCCCcccCEEEEEEEEe
Confidence 3456677889999999999999999999999999 8888777777665443 124799999999999999999999
Q ss_pred CCCceEEEEEEEEecc
Q psy16261 83 TLGGSEGVIKVYNIGY 98 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~ 98 (158)
..|.....+.|.|...
T Consensus 86 ~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 86 YKGEASDYATLDVTGG 101 (103)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCcEEEEEEEEEECC
Confidence 9999998888888653
No 5
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=1.8e-16 Score=97.03 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=74.2
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.......+ .+.|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 9 FERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKN-GVKIERSDRIYWYWPEDN----VCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEEETT----EEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCcceEEcCCCcEEEEEEEEEeCCCEEEEEEC-CEECCCCCCEEEEEcCCC----EEEEEECCCCcCCCEEEEEEEEE
Confidence 3456677899999999999999999999999999 887776666554432211 24799999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy16261 83 TLGGSEGVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~ 97 (158)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999998888888764
No 6
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.72 E-value=2.1e-16 Score=96.58 Aligned_cols=90 Identities=19% Similarity=0.342 Sum_probs=76.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
+..++..+.+.+|+.+.|.|.+.|. |.|.+.|+++ +..+....++.+.... ..+.|.|.+++.+|+|.|+|.|
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFG-VRQLENSEKYEITYED-----GVAILYVKDITKLDDGTYRCKV 77 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEET-TEECCSSSSEEEEEET-----TEEEEEECSCCGGGCEEEEEEE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEEC-CEECcCCCCEEEEEcC-----CeEEEEEecCChhhCeEEEEEE
Confidence 5567778889999999999999997 9999999999 8877777777665433 1347999999999999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|.....+.|.|..
T Consensus 78 ~n~~g~~~~~~~l~V~~ 94 (97)
T 2bk8_A 78 VNDYGEDSSYAELFVKG 94 (97)
T ss_dssp ECSSCEEEEEEEEEETT
T ss_pred ECCCCeEeEEEEEEEEe
Confidence 99999998888888765
No 7
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.71 E-value=3.6e-16 Score=95.62 Aligned_cols=89 Identities=25% Similarity=0.366 Sum_probs=75.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.+.|.|.+.|+++ +..+....++.+.... ..+.|.|.++..+|+|.|+|.|.|
T Consensus 10 ~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 10 VTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKD-GKAITQGGKYKLSEDK-----GGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp EECCCCEEEESSSCEEEEEEEEEESCCEEEEEET-TEECCSSSSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccEEEeCCCcEEEEEEEEecCCCEEEEEEC-CEECcCCCCEEEEEeC-----CEEEEEECCCCcccCEEEEEEEEe
Confidence 4456677899999999999999999999999999 8888777777766543 123699999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy16261 83 TLGGSEGVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~ 97 (158)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 84 SAGSVSSSCKLTIKA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEeEEEEEEEEe
Confidence 999998888888764
No 8
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.71 E-value=9.1e-17 Score=97.52 Aligned_cols=85 Identities=21% Similarity=0.309 Sum_probs=69.0
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCC--eeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENG--SLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
..++..+.+.+|+.+.|.|.+.|.|.|.+.|+++ + ..+....++... . ..+.|.|.++..+|+|.|+|.|
T Consensus 6 ~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~-~~~~~~~~~~~~~~~--~-----~~~~L~i~~~~~~D~G~Y~C~a 77 (93)
T 1wit_A 6 LTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVG-DSGAALAPELLVDAK--S-----STTSIFFPSAKRADSGNYKLKV 77 (93)
T ss_dssp CCCCCEEEECTTBCCEEEEEEECCSSCEEEEECS-TTTCBCSTTSEEEEE--T-----TEEEEECTTBCGGGCEEEEEEE
T ss_pred EcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEEC-CCCcccCCcEEEEec--C-----CEEEEEECCCChhcCEEEEEEE
Confidence 3456677899999999999999999999999999 6 666544333221 1 1247999999999999999999
Q ss_pred EcCCCceEEEEEEEE
Q psy16261 81 KNTLGGSEGVIKVYN 95 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v 95 (158)
.|..|.....+.|.|
T Consensus 78 ~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 78 KNELGEDEAIFEVIV 92 (93)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEE
Confidence 999998888888876
No 9
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.71 E-value=2.7e-16 Score=97.54 Aligned_cols=90 Identities=20% Similarity=0.311 Sum_probs=74.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+...+ ..+.|.|.+++.+|+|.|+|.|.|
T Consensus 17 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 17 LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADG-----AEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEET-----TEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EcCCccEEEeCCCeEEEEEEEeecCCCEEEEEEC-CeECCCCCcEEEEeCC-----CEEEEEEccCCHHhCEEEEEEEEc
Confidence 3455667889999999999999999999999999 8877766666655443 123699999999999999999999
Q ss_pred CCCceEEEEEEEEecc
Q psy16261 83 TLGGSEGVIKVYNIGY 98 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~ 98 (158)
..|.....+.|.|...
T Consensus 91 ~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TTEEEEEEEEEEEEC-
T ss_pred CCCcEEEEEEEEEEcC
Confidence 9999888888888764
No 10
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=2.3e-16 Score=98.60 Aligned_cols=95 Identities=19% Similarity=0.258 Sum_probs=77.6
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++.+...... .+.|.|.+++.+|+|.|+|.|.
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 12 EMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKD-GKQISPKSDHYTIQRDLDG----TCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp SSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECS-SCBCCTTCSSEEEEECTTC----EEEEEESSCCTTTCSCCEEEEE
T ss_pred EecCcCeEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCeEEEEECCCc----EEEEEECCCChhhCEEEEEEEE
Confidence 3455667899999999999999999999999999 777664 456666544211 2369999999999999999999
Q ss_pred cCCCceEEEEEEEEeccCCCC
Q psy16261 82 NTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~~~ 102 (158)
|..|.....+.|.|...+..+
T Consensus 87 N~~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp CTTCCEEECCCEEEECCSCCS
T ss_pred ECCCeEEEEEEEEEECCCCCC
Confidence 999999888899888876554
No 11
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=5.1e-16 Score=98.27 Aligned_cols=87 Identities=21% Similarity=0.339 Sum_probs=72.1
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
++.+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+. ..++.+.... ..+.|.|.++..+|+|.|+|.|.|..|
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~-g~~l~-~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a~N~~G 103 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG-GAPLD-TSRVHVRTSD-----FDTVFFVRQAARSDSGEYELSVQIENM 103 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCCEEEEEET-TEECC-CSSCEEEECS-----SEEEEEESSCCTTTCEEEEEEEECSSC
T ss_pred CCCEEEECCCEEEEEEEEccCCCCEEEEEEC-CEECC-CCcEEEEECC-----CeEEEEECCCChhcCEEEEEEEEeCCC
Confidence 4567788999999999999999999999999 77775 3444444322 124699999999999999999999999
Q ss_pred ceEEEEEEEEeccC
Q psy16261 86 GSEGVIKVYNIGYF 99 (158)
Q Consensus 86 ~~~~~~~l~v~~~~ 99 (158)
.....+.|.|...|
T Consensus 104 ~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 104 KDTATIRIRVVEKA 117 (118)
T ss_dssp EECCEEEEEEECCC
T ss_pred eEEEEEEEEEEcCC
Confidence 98889999888765
No 12
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.70 E-value=3.2e-16 Score=96.10 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=72.2
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....+........+ .+.|.|.+++..|+|.|+|.|.|.
T Consensus 10 ~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (100)
T 2kdg_A 10 QVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLN-GRTVQSDDLHKMIVSEKG----LHSLIFEVVRASDAGAYACVAKNR 84 (100)
T ss_dssp CCCCCEEEETTCCEEEEEECEEESCCEEEEEET-TEEECCCSSSCEEEETTT----EEEEEESSCCGGGCEEEEEEEEET
T ss_pred eCCCCEEecCCCEEEEEEEEEeeCCCEEEEEEC-CEECcCCCcEEEEEcCCC----eEEEEECCCCcccCEEEEEEEEcC
Confidence 355667889999999999999999999999999 877765543322222211 237999999999999999999999
Q ss_pred CCceEEEEEEEEecc
Q psy16261 84 LGGSEGVIKVYNIGY 98 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~ 98 (158)
.|.....+.|.|...
T Consensus 85 ~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 85 AGEATFTVQLDVLAK 99 (100)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CCeEEEEEEEEEEec
Confidence 999988888888653
No 13
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.70 E-value=6.5e-16 Score=94.53 Aligned_cols=90 Identities=21% Similarity=0.313 Sum_probs=72.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
+...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+... .++.....+ ..+.|.|.+++.+|+|.|+|.|
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~a 81 (99)
T 1u2h_A 8 FKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRN-RQPVRPDQRRFAEEAEG-----GLCRLRILAAERGDAGFYTCKA 81 (99)
T ss_dssp EEECCCCEEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCBTTEEEEECGG-----GEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCC-----CEEEEEEccCCcCCCEEEEEEE
Confidence 34556677899999999999999999999999999 7766544 444433222 1236999999999999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|.....+.|.|.+
T Consensus 82 ~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 82 VNEYGARQCEARLEVRG 98 (99)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCceeEEEEEEEEC
Confidence 99999998888888764
No 14
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.69 E-value=5.2e-16 Score=96.17 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=68.7
Q ss_pred cCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy16261 13 LAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIK 92 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 92 (158)
.++.+.|.|.+.|.|.|.++|+++ +..+..+.+........+.....+.|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYN-GAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEEC-CEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 467789999999999999999999 8888766554232211122333457999999999999999999999999999999
Q ss_pred EEEeccC
Q psy16261 93 VYNIGYF 99 (158)
Q Consensus 93 l~v~~~~ 99 (158)
|.|...|
T Consensus 94 l~V~~~P 100 (103)
T 1wwb_X 94 AHFMGWP 100 (103)
T ss_dssp ECCSCCC
T ss_pred EEECCCC
Confidence 9887655
No 15
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1.8e-16 Score=97.31 Aligned_cols=88 Identities=23% Similarity=0.301 Sum_probs=72.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee-cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH-EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+. ...++.....+ .|.|.+++.+|+|.|+|.|
T Consensus 11 i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~--------~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 11 ILQGPANQTLAVDGTALLKCKATGDPLPVISWLKE-GFTFPGRDPRATIQEQG--------TLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp EEECCCCEEEESSSEEEECCEEECSSCCEEEEEES-SSEESSSCSSCEECTTC--------CEEEESCCTTTCCEEEEEE
T ss_pred EEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCCEEEcCCC--------EEEEccCCcccCEEEEEEE
Confidence 34456677789999999999999999999999999 66665 34455444333 6999999999999999999
Q ss_pred EcCCCceEEEEEEEEecc
Q psy16261 81 KNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~~ 98 (158)
.|..|.....+.|.|...
T Consensus 82 ~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 82 TSSSGETSWSAVLDVTES 99 (100)
T ss_dssp ECSSCCCBCCEEEEEESC
T ss_pred EcCCCCEEEEEEEEEecC
Confidence 999999988888888764
No 16
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.68 E-value=9e-16 Score=93.83 Aligned_cols=89 Identities=22% Similarity=0.330 Sum_probs=73.2
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec--CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE--GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++.+.... ..+.|.|.+++.+|+|.|+|.|
T Consensus 9 ~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 9 EALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTD-----DLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CCCCSEEEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECS-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred ecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEEC-CEEeecCCCCEEEEEecC-----CEEEEEEeecCcccCEEEEEEE
Confidence 3456677899999999999999999999999999 777653 3566665442 1247999999999999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|.....+.|.|..
T Consensus 83 ~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEEe
Confidence 99999988888888764
No 17
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.9e-16 Score=98.86 Aligned_cols=97 Identities=19% Similarity=0.294 Sum_probs=77.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|...+..+.+.+|+.+.|.|.+.+.|.|.+.|+++ +..+....+........+ .+.|.|.+++.+|+|.|+|.|.
T Consensus 12 i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 12 FLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLD-GKPVRPDSAHKMLVRENG----VHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp EEECCCEEEEESSSCBCCEEEEECSSCCEEECBBS-SSBCCCCSSEEEEECTTS----CEEEEESSCCGGGCSBBCEEEE
T ss_pred EEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCceEEEEecCC----eEEEEEeeCCcccCEEEEEEEE
Confidence 34556778899999999999999999999999999 776665544433332211 2379999999999999999999
Q ss_pred cCCCceEEEEEEEEeccCCCCC
Q psy16261 82 NTLGGSEGVIKVYNIGYFGSDT 103 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~~~~ 103 (158)
|..|.....+.|.|...+..+.
T Consensus 87 n~~g~~~~~~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKESGPS 108 (110)
T ss_dssp CSSCEEEECCEEEEECCCCSSS
T ss_pred CCCCEEEEEEEEEEeCCCCCCC
Confidence 9999998889999988765543
No 18
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=1.7e-16 Score=103.62 Aligned_cols=85 Identities=24% Similarity=0.305 Sum_probs=69.8
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCC----------------------------eee-ecCCeEEEEEeeccc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENG----------------------------SLI-HEGSRYHMWTEKFSS 56 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~----------------------------~~~-~~~~~~~~~~~~~~~ 56 (158)
++.+.+.+|+.+.|.|.+.|.|.|.++|+|+ + ..+ ....++.+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~--- 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKA-ITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTK--- 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEE-CCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEET---
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEEC-CcccccccccccccccccccccccccccceeecCCCCeEEEEeCC---
Confidence 5677899999999999999999999999999 5 333 234555555433
Q ss_pred ceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy16261 57 YKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNI 96 (158)
Q Consensus 57 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 96 (158)
..+.|.|.+++..|+|.|+|.|.|.+|.....+.|.|.
T Consensus 101 --~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 101 --DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp --TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred --CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 12479999999999999999999999999988888774
No 19
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=4.2e-16 Score=98.57 Aligned_cols=95 Identities=18% Similarity=0.314 Sum_probs=77.7
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
...++.+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++.+..... ..++|.|.+++.+|+|.|+|.|.
T Consensus 19 ~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 19 IYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRN-NEMVQFNTDRISLYQDNT----GRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp SSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEET-TEECCCCBTTEEEEECTT----CEEEEEEEEECGGGCEEEEEEEE
T ss_pred EeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEEC-CEECcCCCCeEEEEeCCC----CeEEEEECCCCcccCEEEEEEEE
Confidence 3456777899999999999999999999999999 776654 45666654431 12379999999999999999999
Q ss_pred cCCCceEEEEEEEEeccCCCC
Q psy16261 82 NTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~~~ 102 (158)
|..|.....+.|.|...+..+
T Consensus 94 N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp ETTEEEEEEEEEEEECCSCCC
T ss_pred cCCCeEEEEEEEEEeCCCCCC
Confidence 999999999999998876543
No 20
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.67 E-value=1.7e-16 Score=98.90 Aligned_cols=89 Identities=20% Similarity=0.352 Sum_probs=75.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.... ..+.|.|.+++..|+|.|+|.|.
T Consensus 17 i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 17 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRK-GQVLSTSARHQVTTTK-----YKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp EEECCCCEEESSSSCEECCEEEECSSCCBCCBCSS-SSCCTTCSSEEEEECS-----SEEEEEECCCCSSCCSEEEECCB
T ss_pred EEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECC-----CEEEEEECcCCchhCEEEEEEEE
Confidence 44567778899999999999999999999999999 7777767777666532 12479999999999999999999
Q ss_pred cCCCceEEEEEEEEe
Q psy16261 82 NTLGGSEGVIKVYNI 96 (158)
Q Consensus 82 n~~g~~~~~~~l~v~ 96 (158)
|..|.....+.|.|.
T Consensus 91 N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSSCBCCEEEEEEEC
T ss_pred eCCCeEEEEEEEEEE
Confidence 999998888888774
No 21
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=4.2e-16 Score=95.49 Aligned_cols=84 Identities=24% Similarity=0.247 Sum_probs=67.6
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.......... .+.|.|.++..+|+|.|+|.|.|
T Consensus 15 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~--------~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 15 SSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLN-GQPIQYARSTCEAG--------VAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp EECCCCEEECTTCCEEEECEEEEESCCCCEEEES-SSBCSSCCCEEETT--------EEEEEECSCCTTCCBCEEEEEEC
T ss_pred eecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEEC-CEECcccceEeeCC--------eEEEEECCCChhhCEEEEEEEEE
Confidence 3455667789999999999999999999999999 77665443221111 23799999999999999999999
Q ss_pred CCCceEEEEEEEE
Q psy16261 83 TLGGSEGVIKVYN 95 (158)
Q Consensus 83 ~~g~~~~~~~l~v 95 (158)
..|.....+.|.|
T Consensus 86 ~~g~~~~~~~l~V 98 (99)
T 2yr3_A 86 ALGQVSCSAWVTV 98 (99)
T ss_dssp SSCEEEEECCEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9999888777765
No 22
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=5.3e-16 Score=95.69 Aligned_cols=87 Identities=20% Similarity=0.199 Sum_probs=71.9
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+.+.+|+.+.|.|.+ .|.|.+.|+|+ +..+..+.++.+...+ ..+.|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~-g~~l~~~~r~~i~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENIPGKWTKN-GLPVQESDRLKVVQKG-----RIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCCCEEEEET-TEECCCCSSEEEEECS-----SEEEEEESSCCGGGCSEEEEEESSS
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCCeEEEEEC-CEECCCCCcEEEEEeC-----CEEEEEECCCChhhCEEEEEEEcCC
Confidence 45667789999999999999 78999999999 8888888888776554 2347999999999999999999998
Q ss_pred CCceEEEEEEEEeccCC
Q psy16261 84 LGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~~ 100 (158)
..+....|.|..+|.
T Consensus 84 --~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 --NVTLPAKVHVISGPS 98 (100)
T ss_dssp --CCCEEEEEEEECCSC
T ss_pred --CeeEEEEEEEeCCCC
Confidence 456677777776653
No 23
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.66 E-value=2.4e-15 Score=99.54 Aligned_cols=94 Identities=19% Similarity=0.328 Sum_probs=76.3
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+...... .+.|.|.+++..|+|.|+|.|.|
T Consensus 45 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~-g~~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~N 119 (154)
T 1fhg_A 45 TKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKD-DNPVKESRHFQIDYDEEG----NCSLTISEVCGDDDAKYTCKAVN 119 (154)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEECTTC----EEEEEESSCCGGGCEEEEEEEEE
T ss_pred EccCCcEEEeCCCeEEEEEEEEEecCCEEEEEEC-CEECCCCCcEEEEECCCC----eEEEEECCCChhcCEEEEEEEEE
Confidence 3445667789999999999999999999999999 888777777766543211 24799999999999999999999
Q ss_pred CCCceEEEEEEEEeccCCC
Q psy16261 83 TLGGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~~~ 101 (158)
..|.....+.|.|...+..
T Consensus 120 ~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 120 SLGEATCTAELLVETMGKE 138 (154)
T ss_dssp TTEEEEEEEEEEEECC---
T ss_pred CCCeEEEEEEEEEeCcCcC
Confidence 9999988889988876533
No 24
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.66 E-value=6.5e-15 Score=101.61 Aligned_cols=92 Identities=22% Similarity=0.337 Sum_probs=73.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee-cCCeEEEEEeecccceEEEEEEEcCCCC-CCCeEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH-EGSRYHMWTEKFSSYKFYMRLYIGSLSK-SDFGTYKCN 79 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~ 79 (158)
|...+..+.+.+|+.+.|.|.+.|.|.+.+.|+++ +..+. ...++.+.....+ .+.|.|.++.. .|+|.|+|.
T Consensus 9 ~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 9 IIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKN-GKKVSGTQSRYTVLEQPGG----ISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSSCCEEEEEET-TEECCTTSTTEEEEEETTT----EEEEEESSCCTTTTCSEEEEE
T ss_pred EEcCCCceEEecCCEEEEEEEEccCCCCeEEEEEC-CEECCCCcceeEEEEcCCC----eEEEEEEecCCCCcCceEEEE
Confidence 34566777899999999999999999999999999 77765 4466665543211 24799999999 999999999
Q ss_pred EEcCCCc-eEEEEEEEEecc
Q psy16261 80 AKNTLGG-SEGVIKVYNIGY 98 (158)
Q Consensus 80 a~n~~g~-~~~~~~l~v~~~ 98 (158)
+.|..|. ....+.|.|...
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp EECSSSCEEEEEEEEEEECT
T ss_pred EEeCCCCeEEeeEEEEEecc
Confidence 9999998 677777777653
No 25
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.65 E-value=8.9e-16 Score=93.55 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=68.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+..+.+.+|+.+.|.|.+.|.| |.+.|+++ +..+....++.+. .. .|.|.+++.+|+|.|+|.|.|.
T Consensus 14 ~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~-~~--------~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 14 VEVESLLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLVESNRTRIT-GE--------EVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp TBBCCEEECTTSCEEEECCEESSC-CEEEEEBT-TBCCCCCSSEEEC-SS--------EEEESSCCGGGSEEEEEEEEET
T ss_pred cCcceEEEcCCCeEEEEEECCCCC-CceEEEEC-CEecCCCCCEEEe-CC--------EEEECCCChHHCEEEEEEeccC
Confidence 345667789999999999999997 89999998 8777766666554 22 6999999999999999999999
Q ss_pred CCceEEEEEEEE
Q psy16261 84 LGGSEGVIKVYN 95 (158)
Q Consensus 84 ~g~~~~~~~l~v 95 (158)
.|.....+.|.|
T Consensus 83 ~g~~~~~~~l~V 94 (95)
T 2ckn_A 83 SGSDTTYFSVNV 94 (95)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999888887766
No 26
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.65 E-value=1.6e-15 Score=97.14 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=69.6
Q ss_pred cCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEee--cccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEE
Q psy16261 13 LAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEK--FSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGV 90 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 90 (158)
.+..+.|.|.+.|.|.|.++|+|+ |..+....++...... .+.....+.|.|.++...|+|.|+|.|.|.+|...+.
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~kn-G~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEET-TEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEEC-CEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 466789999999999999999999 8888777665443221 0111123579999999999999999999999999999
Q ss_pred EEEEEeccCCC
Q psy16261 91 IKVYNIGYFGS 101 (158)
Q Consensus 91 ~~l~v~~~~~~ 101 (158)
+.|.+...|..
T Consensus 93 ~~l~v~~~P~~ 103 (126)
T 1he7_A 93 IMAAFMDNPFE 103 (126)
T ss_dssp EEECCCSCTTS
T ss_pred EEEEEEcCCCC
Confidence 88888776543
No 27
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=7.3e-16 Score=97.47 Aligned_cols=89 Identities=19% Similarity=0.258 Sum_probs=74.9
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
...+..+.+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.. ..++.....+ .|.|.+++.+|+|.|+|.|.
T Consensus 12 ~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~-g~~~~~~~~~~~~~~~~--------~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 12 RQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKD-GVLVSTQDSRIKQLENG--------VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp SBCCCCEEEETTCEEEEECBCCCSSCCEEEEEES-SSBCCTTSTTEEEEETT--------EEEEESCCGGGCCCEEEEEE
T ss_pred EcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEEC-CEECcCCCCeEEEccCC--------EEEEccCCcCCCEEEEEEEE
Confidence 3456667899999999999999999999999999 766653 4566665555 79999999999999999999
Q ss_pred cCCCceEEEEEEEEeccCC
Q psy16261 82 NTLGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~ 100 (158)
|..|.....+.|.|...+.
T Consensus 83 n~~g~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGV 101 (118)
T ss_dssp CSSCEEEEECCEEEECCSC
T ss_pred cCCCcEEEEEEEEEEeCCC
Confidence 9999988888888887643
No 28
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.65 E-value=4.7e-16 Score=96.64 Aligned_cols=89 Identities=19% Similarity=0.264 Sum_probs=63.8
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++...... +.|.|.+++.+|+|.|+|.|.|.
T Consensus 15 ~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~-------~~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 15 GNLENQTTSIGESIEVSCTASGNPPPQIMWFKD-NETLVEDSGIVLKDGN-------RNLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp SCCCCEEEETTCCEEEECBCC----CCEEEEES-SSBCCCBTTEEEETTT-------TEEEECSCCGGGCEEEEEEEC--
T ss_pred cCCCCeEEeCCCeEEEEEECcCcCCCeEEEEEC-CeEcccCCCeEEeCCC-------cEEEEeecCcccCEEEEEEEEeC
Confidence 345667789999999999999999999999999 7666555444443221 26999999999999999999999
Q ss_pred CCceEEEEEEEEeccCC
Q psy16261 84 LGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~~ 100 (158)
.|.....+.|.|...+.
T Consensus 87 ~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 87 LGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp --CEEEEEEEEEEC---
T ss_pred CCceEEEEEEEEeCCCc
Confidence 99999999998887654
No 29
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.64 E-value=9.7e-15 Score=90.98 Aligned_cols=92 Identities=13% Similarity=0.153 Sum_probs=68.8
Q ss_pred ecCceEEEecCCCEEEEeEEeecCC---CeeEEEcCCCeeeec---CCeEEEEEeec-ccceEEEEEEEcCCCCCCCeEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPK---PITFWTHENGSLIHE---GSRYHMWTEKF-SSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~---p~i~W~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
..+..+.+.+|+.+.|.|.+.|.|. |.+.|+|+ +..... ..++.+..... ......+.|.|.+++.+|+|.|
T Consensus 9 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (108)
T 3cx2_A 9 MRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKG-KWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSY 87 (108)
T ss_dssp BCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEET-TTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEE
T ss_pred eCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccC-CcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEE
Confidence 4567788999999999999999998 99999998 522211 23444432110 1111245799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy16261 77 KCNAKNTLGGSEGVIKVYNI 96 (158)
Q Consensus 77 ~C~a~n~~g~~~~~~~l~v~ 96 (158)
.|.|.|..|..++.+.|.|.
T Consensus 88 ~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 88 RCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEECSSCEEEEEEEEEEE
T ss_pred EEEEecCCCceEEEEEEEEe
Confidence 99999999999999998875
No 30
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.64 E-value=2.6e-15 Score=108.62 Aligned_cols=91 Identities=26% Similarity=0.358 Sum_probs=72.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
+...+..+.+.+|+.+.|.|.+.|.|.+.+.|+++ +..+... .++.+....++ .+.|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 7 FKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGG----YHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp EEECCCCEEECTTCCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTT----EEEEEESSCCGGGCSEEEEEE
T ss_pred eeecccceEEeCCCcEEEEEEEeCCCCCeEEEEEC-CEEcccCCCeEEEEECCCC----EEEEEEccCChhhCeEEEEEE
Confidence 34556778899999999999999999999999999 7666543 45555443211 237999999999999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|.....+.|.|..
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEV 98 (305)
T ss_dssp EETTEEEEEEEEEEECE
T ss_pred EcCCCCccceEEEEEec
Confidence 99999887777777654
No 31
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.64 E-value=4.2e-15 Score=90.48 Aligned_cols=85 Identities=11% Similarity=0.105 Sum_probs=67.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|..+++.+.+.+|+.+.|.|.+.+ +.+.+.|+|+ +..+..+.++.+...+ ..+.|.|.+++.+|+|.|+|.|.
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~-g~~i~~~~~~~i~~~g-----~~~~L~I~~v~~~D~G~Y~C~a~ 80 (93)
T 1waa_A 8 VEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLK-GQPLAASPDCEIIEDG-----KKHILILHNCQLGMTGEVSFQAA 80 (93)
T ss_dssp EEECCCCEEEETTSCEEEEEEESS-SSCCCEEEET-TEECCCBTTEEEEEET-----TEEEEEECSCCGGGCEEEEEEET
T ss_pred eeccCcceEEeCCCCEEEEEEECC-CCCeEEEEEC-CEECcCCCCEEEEEEC-----CEEEEEECCCChhhCEEEEEEEC
Confidence 345667788999999999999976 5588999999 8888777777776543 12479999999999999999998
Q ss_pred cCCCceEEEEEEEEec
Q psy16261 82 NTLGGSEGVIKVYNIG 97 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~ 97 (158)
|. ..+..|.|..
T Consensus 81 n~----~~sa~L~V~~ 92 (93)
T 1waa_A 81 NT----KSAANLKVKE 92 (93)
T ss_dssp TE----EEEEEEEEEC
T ss_pred CC----cEEEEEEEEc
Confidence 84 3455666543
No 32
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.64 E-value=6.1e-15 Score=100.01 Aligned_cols=90 Identities=21% Similarity=0.314 Sum_probs=73.9
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+....++.+...+ ..+.|.|.+++.+|+|.|+|.+.|
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 11 RKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRF-GKELIQSRKYKMSSDG-----RTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EECCCCEEEETTSEEEEEEEEEEESCCEEEEEET-TEEECCCSSEEEEESS-----SEEEEEEECCSGGGCEEEEEEEEC
T ss_pred cccCCceEEeCCCcEEEEEEEecCCCCEEEEEEC-CEECCCCccEEEEeCC-----CEEEEEEecCCccCCEEEEEEEEC
Confidence 3456677899999999999999999999999999 8877777777666543 134799999999999999999999
Q ss_pred CCCceEEEEEEEEecc
Q psy16261 83 TLGGSEGVIKVYNIGY 98 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~ 98 (158)
..|.......|.|...
T Consensus 85 ~~~~~~~~~~l~v~~~ 100 (197)
T 3lcy_A 85 EVGEVETSSKLLLQAT 100 (197)
T ss_dssp SSCEEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEEcC
Confidence 9998877776666543
No 33
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=1e-14 Score=93.39 Aligned_cols=98 Identities=12% Similarity=0.079 Sum_probs=73.3
Q ss_pred ecCceEEEecCCCEEEEeEEeec---CCCeeEEEcCCCee-ee--cCCeEEEEEee-cccceEEEEEEEcCCCCCCCeEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESY---PKPITFWTHENGSL-IH--EGSRYHMWTEK-FSSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~---p~p~i~W~~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
..|+.+.+.+|+.+.|.|.+.+. |.|.+.|+|+ ... +. .+.++.+.... .......++|.|.+++..|+|.|
T Consensus 12 ~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kg-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y 90 (126)
T 2dav_A 12 EKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKG-KWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNY 90 (126)
T ss_dssp SCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEES-SSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEE
T ss_pred EcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeC-cCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEE
Confidence 45677889999999999999875 8999999998 422 11 13455543221 01111235899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEec-cCCCC
Q psy16261 77 KCNAKNTLGGSEGVIKVYNIG-YFGSD 102 (158)
Q Consensus 77 ~C~a~n~~g~~~~~~~l~v~~-~~~~~ 102 (158)
+|.+.|..|..++.+.|.|.. .+..+
T Consensus 91 ~Cevsn~~g~~~~~~~L~V~~~~~~~p 117 (126)
T 2dav_A 91 RCEVTYKDKFDSCSFDLEVHESTGTTP 117 (126)
T ss_dssp EEEEECSSCEEEECCEEEEECCCCSCC
T ss_pred EEEEEeCCCcEEEEEEEEEEecCCCCC
Confidence 999999999999999999988 44333
No 34
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=90.51 Aligned_cols=80 Identities=18% Similarity=0.267 Sum_probs=65.0
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
..+.+.+|+.+.|.|.+.+ |.|.+.|+|+ +..+..+.++.+...+ . .+.|.|.+++.+|+|.|+|.|.|
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~-g~~l~~~~~~~~~~~~-~----~~~L~I~~~~~~D~G~Y~C~a~n---- 72 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKD-GERLASQGRVQLEQAG-A----RQVLRVQGARSGDAGEYLCDAPQ---- 72 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEET-TEECCCCSSEEEEECS-S----CEEEEESSCSSTTCEEEEEECTT----
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEEC-CEEccccccEEEeecC-C----eEEEEecCCCCcccEEEEEEECC----
Confidence 4677899999999999966 8899999999 8988888888776654 1 23799999999999999999855
Q ss_pred eEEEEEEEEec
Q psy16261 87 SEGVIKVYNIG 97 (158)
Q Consensus 87 ~~~~~~l~v~~ 97 (158)
....+.|.|..
T Consensus 73 ~~~~a~l~V~e 83 (84)
T 2lu7_A 73 DSRIFLVSVEE 83 (84)
T ss_dssp TCEEEEEEECC
T ss_pred EEEEEEEEEEC
Confidence 44556666653
No 35
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.63 E-value=2.4e-15 Score=118.11 Aligned_cols=88 Identities=20% Similarity=0.428 Sum_probs=73.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+..+.+.+|+.+.|.|.+.|.|.|.+.|+|+ +..+..+.++.+.... ..++|.|.++..+|+|.|+|.|.|..
T Consensus 390 ~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~-g~~l~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~A~N~~ 463 (570)
T 3b43_A 390 KPHPVETLKGADVHLECELQGTPPFQVSWHKD-KRELRSGKKYKIMSEN-----FLTSIHILNVDSADIGEYQCKASNDV 463 (570)
T ss_dssp CCCCEEECTTCCEEEEEEEESSSSCCCEEEET-TEECCSSSSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CCCceeecCCCEEEEEEEEecCCCCEEEEEEC-CEECcCCCCEEEEEcC-----CEEEEEECCCChhhCEEEEEEEEECC
Confidence 34556778999999999999999999999999 8888777777665443 12479999999999999999999999
Q ss_pred CceEEEEEEEEecc
Q psy16261 85 GGSEGVIKVYNIGY 98 (158)
Q Consensus 85 g~~~~~~~l~v~~~ 98 (158)
|.......|.|..+
T Consensus 464 G~~~~~~~l~v~~~ 477 (570)
T 3b43_A 464 GSDTCVGSITLKAP 477 (570)
T ss_dssp CEEEEEEEEEECCC
T ss_pred CeEEEEEEEEeccC
Confidence 99888877776654
No 36
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.63 E-value=6.1e-15 Score=105.67 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=75.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+....++.+.... ..+.|.|.+++..|+|.|+|.+.
T Consensus 8 ~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~ 81 (284)
T 2rik_A 8 FDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKD-NREIRPGGNYKMTLVE-----NTATLTVLKVTKGDAGQYTCYAS 81 (284)
T ss_dssp EEECCCCEEEETTCCEEEEEEEESSSCCEEEEEET-TEECCSSSSEEEEEET-----TEEEEEESSCCGGGCEEEEEEEE
T ss_pred EEccccceEecCCCcEEEEEEEEcCCCCEEEEEEC-CEECcCCCcEEEEEcC-----CEEEEEEecCCcccCEEEEEEEE
Confidence 34566777899999999999999999999999999 8877766666554332 12479999999999999999999
Q ss_pred cCCCceEEEEEEEEeccC
Q psy16261 82 NTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~ 99 (158)
|..|.....+.|.|...+
T Consensus 82 n~~g~~~~~~~l~V~~~p 99 (284)
T 2rik_A 82 NVAGKDSCSAQLGVQEPP 99 (284)
T ss_dssp ETTEEEEEEEEEEEECCC
T ss_pred ECCceEEEEEEEEccCCC
Confidence 999988777777776543
No 37
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.63 E-value=5.8e-15 Score=100.40 Aligned_cols=91 Identities=26% Similarity=0.358 Sum_probs=72.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+... .++.+.....+ .+.|.|.+++.+|+|.|+|.+
T Consensus 7 ~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 7 FKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGG----YHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTT----EEEEEECSCCGGGCSEEEEEE
T ss_pred EEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEEC-CEECccCCCcEEEEEcCCC----EEEEEECcCCHHhCEEEEEEE
Confidence 34556677899999999999999999999999999 7666543 46655543311 237999999999999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|.....+.|.|..
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEV 98 (197)
T ss_dssp EETTEEEEEEEEEEEEE
T ss_pred EECCCceeEEEEEEEcC
Confidence 99988877777776654
No 38
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.63 E-value=3.1e-15 Score=102.43 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=70.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCC-----CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPK-----PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~-----p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
|..++..+.+.+|+.+.|.|.+.+.|. +.+.|++.++.......++.+.... ......+|.|.+++.+|+|.|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y 82 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQ--LPLGKALFHIPSVQVRDSGQY 82 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGG--GGGTEEEEEECSCCGGGCEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeecc--ccCCeeEEEECCCCHHHCcEE
Confidence 455777788999999999999999886 8999999425554445555544321 011234799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEeccC
Q psy16261 77 KCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 77 ~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
+|.+.|..+.....+.|.|...+
T Consensus 83 ~C~~~~~~~~~~~~~~l~V~~~~ 105 (202)
T 3bp6_B 83 RCLVICGAAWDYKYLTVKVKASY 105 (202)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCC
T ss_pred EEEEEeCCCcceEEEEEEecCCC
Confidence 99999998877777878776643
No 39
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.63 E-value=2.8e-15 Score=104.05 Aligned_cols=86 Identities=20% Similarity=0.351 Sum_probs=67.0
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+....++......... +.|.|.+++..|+|.|+|.+.|..|.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~~~ 101 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQH----WSLIMESVVPSDKGNYTCVVENEYGS 101 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGG----TEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEEC-CccccccccccceeeecCc----ceEEEecCCcccCEEEEEEEecccCc
Confidence 567789999999999999999999999999 7776544332111111011 26999999999999999999999998
Q ss_pred eEEEEEEEEec
Q psy16261 87 SEGVIKVYNIG 97 (158)
Q Consensus 87 ~~~~~~l~v~~ 97 (158)
....+.|.|..
T Consensus 102 ~~~~~~l~V~~ 112 (231)
T 3ojm_B 102 INHTYHLDVVE 112 (231)
T ss_dssp EEEEEEEEEEC
T ss_pred ccccEEEEEEc
Confidence 88777777765
No 40
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.62 E-value=7e-15 Score=101.72 Aligned_cols=91 Identities=21% Similarity=0.355 Sum_probs=74.1
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC--CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG--SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
.+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+... .++.+.... ..+.|.|.++..+|+|.|+|.|.|
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~-g~~l~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n 97 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVFAYPSATISWFRD-GQLLPSSNYSNIKIYNTP-----SASYLEVTPDSENDFGNYNCTAVN 97 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEEEESCCEEEEEET-TEESSCSSSCSEEEEEET-----TEEEEEECCCSGGGCEEEEEEEEC
T ss_pred CCceEEEECCCCEEEEEEEeecCCCEEEEEEC-CeECCCCCCccEEEecCC-----CeeEEEEecCChhhCeEEEEEEEE
Confidence 44557788999999999999999999999999 7777654 455554322 124799999999999999999999
Q ss_pred CCCceEEEEEEEEeccCCC
Q psy16261 83 TLGGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~~~ 101 (158)
..|.....+.|.+...+..
T Consensus 98 ~~g~~~~~~~l~v~~~P~~ 116 (215)
T 3mtr_A 98 RIGQESLEFILVQADTPSS 116 (215)
T ss_dssp SSCEEEEEEEEEECCCCCC
T ss_pred CCCceEEEEEEEECCCCCC
Confidence 9999988888888766544
No 41
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=93.59 Aligned_cols=86 Identities=16% Similarity=0.238 Sum_probs=70.8
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
++..+.+.+|+.+.|.|.+.+.| |.+.|+++ +..+....++.+. .. .|.|.+++.+|+|.|+|.|.|..
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~-~~--------~L~i~~v~~~D~G~Y~C~a~n~~ 77 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLAESNRTRIT-GE--------EVEVQDSVPADSGLYACVTSSPS 77 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEES-SSBCCCCSSEEEC-SS--------EEEETTCCTTTCEEEEEEEEETT
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEEC-CEECCCCCcEEEE-CC--------EEEEccCCHHHCEEEEEEEEeCC
Confidence 34556678999999999999987 79999999 7777666666554 22 69999999999999999999999
Q ss_pred CceEEEEEEEEeccCCC
Q psy16261 85 GGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 85 g~~~~~~~l~v~~~~~~ 101 (158)
|.....+.|.|...++.
T Consensus 78 g~~~~~~~l~V~~~~~s 94 (99)
T 2cr3_A 78 GSDTTYFSVNVSDALPS 94 (99)
T ss_dssp EEEEEEEEECBCSCCSC
T ss_pred ceEEEEEEEEEecCCCC
Confidence 99888888888776543
No 42
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.62 E-value=6.6e-15 Score=115.62 Aligned_cols=88 Identities=25% Similarity=0.460 Sum_probs=71.5
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+.+.+.+.+|+.+.|.|.+.|.|.|.+.|+|+ +..+....++.+.... ..++|.|.++..+|+|.|+|.|.|.
T Consensus 10 ~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (570)
T 3b43_A 10 EPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKE-HTKLRSAPAYKMQFKN-----NVASLVINKVDHSDVGEYTCKAENS 83 (570)
T ss_dssp ECCCCEEECTTSCEEEEEEEESSSSCEEEEECS-SSBCCCCSSEEEECCT-----TEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EECCceEEcCCCEEEEEEEEccCCCCEEEEEEC-CEEccCCCCEEEEEEC-----CEEEEEEccCChhhCEEEEEEEEeC
Confidence 355667788999999999999999999999999 7777766666554332 1247999999999999999999999
Q ss_pred CCceEEEEEEEEec
Q psy16261 84 LGGSEGVIKVYNIG 97 (158)
Q Consensus 84 ~g~~~~~~~l~v~~ 97 (158)
.|.......|.+..
T Consensus 84 ~g~~~~~~~l~v~~ 97 (570)
T 3b43_A 84 VGAVASSAVLVIKE 97 (570)
T ss_dssp TEEEEEEEEEEECC
T ss_pred CceEEEEEEEEECC
Confidence 99877766666543
No 43
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.61 E-value=9.1e-15 Score=99.10 Aligned_cols=88 Identities=19% Similarity=0.326 Sum_probs=69.6
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
..++..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.... ++.+.... ..+.|.|.+++..|+|.|+|.+
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 9 TQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRD-GQVISTSTLPGVQISFSD-----GRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEES-SSBCCTTTSTTCEEEEET-----TEEEEEESSCCGGGCEEEEEEE
T ss_pred EccCCceEEECCCEEEEEEEEEecCCCEEEEEEC-CEEcccccCCceEEEeCC-----CEEEEEECCCCcccCEEEEEEE
Confidence 4456677899999999999999999999999999 77665442 34433322 1247999999999999999999
Q ss_pred EcCCCceEEEEEEEEe
Q psy16261 81 KNTLGGSEGVIKVYNI 96 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~ 96 (158)
.|..|.......|.|.
T Consensus 83 ~n~~~~~~~~~~l~v~ 98 (194)
T 2a38_A 83 TNGSGQATSTAELLVK 98 (194)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EcCCceEeEEEEEEEc
Confidence 9999887777666665
No 44
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.61 E-value=1.5e-14 Score=107.90 Aligned_cols=88 Identities=23% Similarity=0.274 Sum_probs=69.1
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceeeec-----CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLIHE-----GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCN 79 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 79 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|++++ +..+.. ..++.+.... ..+.|.|.+++.+|+|.|+|.
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~ 81 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH-----GSSSLHIKDVKLSDSGRYDCE 81 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECS-----SEEEEEEESCCGGGCEEEEEE
T ss_pred cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccC-----CcceEEEcccChhhCEEEEEE
Confidence 44556788999999999999999999999982 444433 3556554321 134799999999999999999
Q ss_pred EEcCCCceEEEEEEEEecc
Q psy16261 80 AKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 80 a~n~~g~~~~~~~l~v~~~ 98 (158)
|.|..|..+..+.|.|...
T Consensus 82 a~n~~g~~~~~~~l~V~~~ 100 (389)
T 2jll_A 82 AASRIGGHQKSMYLDIEYA 100 (389)
T ss_dssp EECSSCEEEEEEEEEEEEE
T ss_pred EEeCCCCcceEEEEEEEeC
Confidence 9999999888888777654
No 45
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.60 E-value=2.5e-15 Score=112.65 Aligned_cols=127 Identities=17% Similarity=0.250 Sum_probs=90.5
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+..+.+.+|+.+.|.|.+.|.|.|.+.|+++++..+....+. .... +.|.|.+++.+|+|.|+|.|.|..|
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~-~~~~--------~~L~I~~v~~~D~G~Y~C~a~N~~G 282 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARR-HKSN--------GILEIPNFQQEDAGSYECVAENSRG 282 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEE-CTTS--------CEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccccee-cCCC--------cEEEECCCChhhCEEEEEEEEcCCC
Confidence 345567889999999999999999999999646555433221 1111 2699999999999999999999999
Q ss_pred ceEEEEEEEEeccCCC------------------------CCc---------cc----------chhhhhhhcccccccc
Q psy16261 86 GSEGVIKVYNIGYFGS------------------------DTQ---------YV----------TDEEMQRTNQIARSKW 122 (158)
Q Consensus 86 ~~~~~~~l~v~~~~~~------------------------~~~---------~~----------~~~~~~~~~~~~~~~~ 122 (158)
.......|.|...|.. +.. .+ ..+.+......|.|.|
T Consensus 283 ~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y 362 (384)
T 3kld_A 283 KNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMY 362 (384)
T ss_dssp EEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEE
T ss_pred eEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEE
Confidence 8877766665543210 000 00 0122333344567777
Q ss_pred cCcccceEeeeccCCceEEEEccccC
Q psy16261 123 GSERTNQIARSKWGSGYRYTSGPIRL 148 (158)
Q Consensus 123 g~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (158)
.|.|.|..|....++.|.|
T Consensus 363 -------~C~A~N~~G~~~~~a~L~V 381 (384)
T 3kld_A 363 -------QCVAENKHGVIFSSAELSV 381 (384)
T ss_dssp -------EEEEEETTEEEEEEEEEEE
T ss_pred -------EEEEEeCCceEEeceEEEE
Confidence 9999999999999999885
No 46
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=1e-14 Score=89.95 Aligned_cols=90 Identities=18% Similarity=0.264 Sum_probs=71.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+..++..+.+.+|+.+.|.|.+.+ |.+.+.|+++ +..+....++.+...+ ..+.|.|.++..+|+|.|+|.+.
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~-g~~~~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 11 IIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKD-RKAIRKSQKYDVVCEG-----TMAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp EEECCCCEEECTTSCEEECCEESS-SSCCCCEEES-SCBCCCSSSEEEEEET-----TEEEEEESSCCTTTCSEEEEECS
T ss_pred EEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEEC-CEEccCCCCEEEEECC-----CEEEEEECCCCcccCEEEEEEEc
Confidence 345566778999999999999997 8889999999 8877777777766544 13479999999999999999999
Q ss_pred cCCCceEEEEEEEEeccCCCC
Q psy16261 82 NTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~~~ 102 (158)
| ....+.|.|...+..+
T Consensus 84 n----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 84 A----SKSTASLHVEEKASGP 100 (103)
T ss_dssp S----CEEEEEEEECCCSSSS
T ss_pred c----CCcEEEEEEeCCCCCC
Confidence 9 3667777777765443
No 47
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.60 E-value=4e-15 Score=91.16 Aligned_cols=82 Identities=22% Similarity=0.416 Sum_probs=66.0
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCe---EEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSR---YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
++.+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....+ +..... . +.|.|.+++.+|+|.|+|.|.|
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~---~----~~L~i~~v~~~D~G~Y~C~a~N 86 (100)
T 3caf_A 15 KRLHAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQ---H----WSLIMESVVPSDKGNYTCVVEN 86 (100)
T ss_dssp CCEEEECTTCCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGG---G----TEEEECSCCGGGCEEEEEEEEE
T ss_pred ccEEEecCCCEEEEEEEccccCCCEEEEEEC-CEEcccccccccEEEecC---e----EEEEEccCCcCCCEEEEEEEEe
Confidence 3567788999999999999999999999999 776654432 222211 1 2699999999999999999999
Q ss_pred CCCceEEEEEEEE
Q psy16261 83 TLGGSEGVIKVYN 95 (158)
Q Consensus 83 ~~g~~~~~~~l~v 95 (158)
..|.....+.|.|
T Consensus 87 ~~g~~~~~~~l~V 99 (100)
T 3caf_A 87 EYGSINHTYHLDV 99 (100)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE
Confidence 9999888887766
No 48
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.59 E-value=4.9e-14 Score=95.28 Aligned_cols=91 Identities=20% Similarity=0.285 Sum_probs=72.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+..++..+.+.+|+.+.|.|.+.+.|. .+.|+++++..+....++.+...+ ..+.|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~ 78 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEG-----VRSRLTIYNANIEDAGIYRCQAT 78 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCC-----CeEEEEEccCCcccCeEEEEEEE
Confidence 456778888999999999999999877 899999437777767777666543 12479999999999999999999
Q ss_pred cCCCce-EEEEEEEEecc
Q psy16261 82 NTLGGS-EGVIKVYNIGY 98 (158)
Q Consensus 82 n~~g~~-~~~~~l~v~~~ 98 (158)
|..|.. ...+.|.|...
T Consensus 79 ~~~g~~~~~~~~l~v~~~ 96 (189)
T 2v44_A 79 DAKGQTQEATVVLEIYQK 96 (189)
T ss_dssp CTTSCEEEEEEEEEEECC
T ss_pred eCCCCcEEEEEEEEEecC
Confidence 998876 55666666543
No 49
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.59 E-value=1.1e-14 Score=88.52 Aligned_cols=83 Identities=19% Similarity=0.304 Sum_probs=69.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
++....+.+|+.+.|.|.+.+ .|.+.|+++ +..+....++.... . .|.|.+++.+|+|.|+|.|.|..
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~-g~~~~~~~~~~~~~-~--------~L~i~~~~~~D~G~Y~C~a~n~~ 74 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKD-GVHLGPNNRTVLIG-E--------YLQIKGATPRDSGLYACTAARTV 74 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEET-TEEECCCSSEEEET-T--------EEEECSCCGGGCEEEEEEEECSS
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEEC-CEECCCCceEEEeC-C--------EEEECcCCcccCEEEEEEEccCC
Confidence 567778999999999999987 579999999 88887766665542 2 69999999999999999999999
Q ss_pred CceEEEEEEEEeccC
Q psy16261 85 GGSEGVIKVYNIGYF 99 (158)
Q Consensus 85 g~~~~~~~l~v~~~~ 99 (158)
|.....+.|.|....
T Consensus 75 g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 75 DSETWIFMVNVTDAA 89 (95)
T ss_dssp CEEEEEEEEEECCC-
T ss_pred CcEEEEEEEEEeCCc
Confidence 988888888887654
No 50
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=87.97 Aligned_cols=81 Identities=16% Similarity=0.243 Sum_probs=65.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|...|....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....+ . .|.|.+++.+|+|.|+|.|.
T Consensus 6 i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~------~--------~L~i~~v~~~d~G~Y~C~a~ 70 (91)
T 3bfo_A 6 ICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHETK------K--------LYMVPYVDLEHQGTYWCHVY 70 (91)
T ss_dssp EEECCCCEEECTTSCEEEECEEECSSCCEEEEEET-TEECTTCCS------S--------EEEESSCCGGGCEEEEEEEE
T ss_pred EEECCCccEecCCCcEEEEEEeccCCCCEEEEEcC-CeeCCcCCC------C--------eEEECCCCHHhCEEEEEEEE
Confidence 45567777899999999999999999999999999 776644321 1 69999999999999999999
Q ss_pred cCCCceE-EEEEEEEec
Q psy16261 82 NTLGGSE-GVIKVYNIG 97 (158)
Q Consensus 82 n~~g~~~-~~~~l~v~~ 97 (158)
|..|... ..+.|.|.+
T Consensus 71 n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 71 NDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp CSSCEEECCCEEEEEC-
T ss_pred cCCCCEEeeeEEEEEeh
Confidence 9999754 456666643
No 51
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.59 E-value=1e-14 Score=102.09 Aligned_cols=84 Identities=20% Similarity=0.402 Sum_probs=66.9
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeE---EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRY---HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+....++ ..... . .+|.|.+++..|+|.|+|.+.|
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~---~----~~L~i~~v~~~d~G~Y~C~~~~ 93 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQ---Q----WSLVMESVVPSDRGNYTCVVEN 93 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEET-TEECCGGGSTTCCEEEGG---G----TEEEECSCCGGGCEEEEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEEC-CcccCCCCcccceeeecc---c----eEEEEEeCCcccCEEEEEEEee
Confidence 3467789999999999999999999999999 7766543222 22111 1 2699999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy16261 83 TLGGSEGVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~ 97 (158)
..|.....+.|.|..
T Consensus 94 ~~~~~~~~~~l~V~~ 108 (241)
T 3grw_A 94 KFGSIRQTYTLDVLE 108 (241)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred cCCceEEEEEEEEec
Confidence 998888777777765
No 52
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.59 E-value=5.5e-14 Score=100.64 Aligned_cols=86 Identities=20% Similarity=0.277 Sum_probs=70.8
Q ss_pred eEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 8 LIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
...+.+|+.+.|.|.+.|.|.+.+.|+++ +..+....++...... ..+.|.|.+++.+|.|.|+|.+.|..|..
T Consensus 108 ~~~v~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 181 (284)
T 2rik_A 108 SRIVKQDEHTRYECKIGGSPEIKVLWYKD-ETEIQESSKFRMSFVE-----SVAVLEMYNLSVEDSGDYTCEAHNAAGSA 181 (284)
T ss_dssp EEEEETTCCEEEEEEEESSSCCEEEEEET-TEECCCSSSEEEEEET-----TEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred ceEecCCceEEEEEEEeeeCCCEEEEEEC-CEECcCCCcEEEEEcC-----CEEEEEECCCCcccCEEEEEEEEcCCCce
Confidence 34578999999999999999999999999 8777666655544332 12479999999999999999999999988
Q ss_pred EEEEEEEEeccC
Q psy16261 88 EGVIKVYNIGYF 99 (158)
Q Consensus 88 ~~~~~l~v~~~~ 99 (158)
...+.|.|...+
T Consensus 182 ~~~~~l~V~~~p 193 (284)
T 2rik_A 182 SSSTSLKVKEPP 193 (284)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEEecCC
Confidence 888888877654
No 53
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.5e-14 Score=89.21 Aligned_cols=87 Identities=21% Similarity=0.223 Sum_probs=68.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
...+..+.+.+|+.+.|.|.+.+ |.+.+.|+|+ +..+.... ++.+...+ ..+.|.|.+++.+|+|.|+|.|
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~-g~~l~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a 83 (103)
T 1x44_A 11 TKQLEDTTAYCGERVELECEVSE-DDANVKWFKN-GEEIIPGPKSRYRIRVEG-----KKHILIIEGATKADAAEYSVMT 83 (103)
T ss_dssp SBCCCCEEEETTEEEEEEEECSS-SSCCCEEEET-TEECCCSTTCSEEEEEET-----TEEEEEEEEECTTTCSEEEEEE
T ss_pred eccCCCEEEECCCCEEEEEEecC-CCCeEEEEEC-CEECCCCCceEEEEEEcC-----CEEEEEECCCCcccCEEEEEEE
Confidence 34566678899999999999987 7799999999 88777665 56666543 1247999999999999999999
Q ss_pred EcCCCceEEEEEEEEeccCC
Q psy16261 81 KNTLGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~~~~ 100 (158)
.| ......|.|...+.
T Consensus 84 ~n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 84 TG----GQSSAKLSVDLKSG 99 (103)
T ss_dssp TT----EEEEEEEEEECCCS
T ss_pred CC----CcEEEEEEEeCCCC
Confidence 88 46667777777654
No 54
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.58 E-value=1.6e-14 Score=99.07 Aligned_cols=142 Identities=15% Similarity=0.148 Sum_probs=92.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC----CCeeEEEcCC---------------Ceeeec-----CCeEEEEEeecccc
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP----KPITFWTHEN---------------GSLIHE-----GSRYHMWTEKFSSY 57 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p----~p~i~W~~~~---------------~~~~~~-----~~~~~~~~~~~~~~ 57 (158)
|..++..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +..+.. ..|+.+.... ..
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~ 80 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSND--VK 80 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSC--GG
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccC--cc
Confidence 45567778899999999999999887 4699998841 222211 2333332200 00
Q ss_pred eEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEeccCCCCCc----------------cc---------------
Q psy16261 58 KFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQ----------------YV--------------- 106 (158)
Q Consensus 58 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~----------------~~--------------- 106 (158)
...++|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+..+.. .+
T Consensus 81 ~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~ 160 (214)
T 3jz7_A 81 SGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLS 160 (214)
T ss_dssp GTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECS
T ss_pred CCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECC
Confidence 01236999999999999999999999888888888887765422110 00
Q ss_pred ---------------chhhhhhhcccccccccCcccceEeeeccCCceEEEEccccCCCCC
Q psy16261 107 ---------------TDEEMQRTNQIARSKWGSERTNQIARSKWGSGYRYTSGPIRLPDPS 152 (158)
Q Consensus 107 ---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (158)
..+.+......+.|.| .|.+.|..|....+..|.|..|+
T Consensus 161 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y-------~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 161 DSQTMPTPWLAEMTSPVISVKNASSEYSGTY-------SCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp TTCCCCGGGGGGTTSSEEEECSCCGGGCEEE-------EEEEECSSCEEEEEEEECCBCCC
T ss_pred CCCccCccceeccCCCEEEEecCCHHHCEEE-------EEEEEcCCCcEEEEEEEEEeCCC
Confidence 0011112223344555 89999999999999999987654
No 55
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.58 E-value=3.9e-14 Score=90.35 Aligned_cols=94 Identities=19% Similarity=0.279 Sum_probs=71.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee-------cCCeEEEEEeecccceEEEEEEEcCCCCCCCeE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH-------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 75 (158)
+..+..+.+.+|+++.|.|.+.+.|.+.+.|++.++..+. ...++.+..... ...+|.|.+++.+|+|.
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L~I~~v~~~DsG~ 80 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSA----NQLSITVPNVTLQDEGV 80 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEET----TEEEEEESSCCGGGCEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCC----CEEEEEECCCChHHCEE
Confidence 3456778899999999999999999999999987444332 345555543211 12479999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccCCC
Q psy16261 76 YKCNAKNTLGGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 76 Y~C~a~n~~g~~~~~~~l~v~~~~~~ 101 (158)
|.|.+.|. |.....+.|.|...|..
T Consensus 81 Y~C~a~n~-g~~~~~~~l~V~~~P~~ 105 (124)
T 3rbg_A 81 YKCLHYSD-SVSTKEVKVIVLATMKG 105 (124)
T ss_dssp EEEEEESS-SEEEEEEEEEEECC---
T ss_pred EEEEEEcC-CCCcEEEEEEEEeCCCC
Confidence 99999999 88888899988876643
No 56
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.58 E-value=5.7e-14 Score=86.86 Aligned_cols=89 Identities=15% Similarity=0.238 Sum_probs=68.9
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-------CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-------GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYK 77 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 77 (158)
.+..+.+.+|+.+.|.|.+.+.|.+.+.|++++...+.. ..++.+..... ...+|.|.+++.+|+|.|+
T Consensus 12 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L~I~~v~~~D~G~Y~ 87 (108)
T 3m45_A 12 LTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASW----HELSISVSDVSLSDEGQYT 87 (108)
T ss_dssp ECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESS----SEEEEEECSCCGGGCEEEE
T ss_pred cCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCC----CcEEEEECCCChhHCeEEE
Confidence 456678999999999999999999999999983323322 23555543221 1347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEecc
Q psy16261 78 CNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 78 C~a~n~~g~~~~~~~l~v~~~ 98 (158)
|.+.| .|.....+.|.|...
T Consensus 88 C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 88 CSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp EEECS-SSCEEEEEEEEEECC
T ss_pred EEEEc-CCCcEEEEEEEEEcC
Confidence 99999 888888888888764
No 57
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.58 E-value=1.2e-13 Score=95.27 Aligned_cols=91 Identities=15% Similarity=0.203 Sum_probs=70.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCC-CCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSL-SKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.|.|.+.+.|+++ +..+............ . ..+.|.|.++ +.+|+|.|+|.+
T Consensus 9 ~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~-~---~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 9 FTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKK-GKKVSNQRFEVIEFDD-G---SGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCTTEEEEEEGG-G---TEEEEEECSCCTTTTCEEEEEEE
T ss_pred EEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEEC-CcCCCCCceeEEEEcC-C---CceEEEEeccCCCCCCeEEEEEE
Confidence 34556677899999999999999999999999999 7776554332222211 1 1246999999 599999999999
Q ss_pred EcCCCceEEEEEEEEec
Q psy16261 81 KNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~ 97 (158)
.|..|.....+.|.|..
T Consensus 84 ~n~~g~~~~~~~l~V~~ 100 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLR 100 (212)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EcCCCcEEEEEEEEEec
Confidence 99999887777777754
No 58
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2e-14 Score=91.07 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=70.6
Q ss_pred ecCceEEEecCCCEEEEeEEeec---CCCeeEEEcCCCe-eeec--CCeEEEEEeec-ccceEEEEEEEcCCCCCCCeEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESY---PKPITFWTHENGS-LIHE--GSRYHMWTEKF-SSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~---p~p~i~W~~~~~~-~~~~--~~~~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
..|+.+.+.+|+.+.|.|.+.|. |.|.+.|+|+ .. .+.. +.++.+..... ......++|.|.++...|+|.|
T Consensus 17 ~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kg-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (118)
T 2edn_A 17 KKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKG-KWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYY 95 (118)
T ss_dssp BCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEET-TTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCE
T ss_pred ECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeC-CEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEE
Confidence 34677889999999999999885 7899999998 42 2221 23444432210 1111245899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEecc
Q psy16261 77 KCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 77 ~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
.|.+.|..|..++.+.|.|..+
T Consensus 96 ~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 96 RLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EEEEECSSCEEEEEECCEEECC
T ss_pred EEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999988763
No 59
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=89.20 Aligned_cols=81 Identities=16% Similarity=0.277 Sum_probs=64.7
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+.+|+.+.|.|.+.+.|.+ +.|+++ +..+....++.+...+ ..+.|.|.+++.+|+|.|+|.+.|..+
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~-g~~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a~n~~~--- 89 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKD-GQKVEESELLVVKMDG-----RKHRLILPEAKVQDSGEFECRTEGVSA--- 89 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEET-TEECCCBTTBEEEEET-----TEEEEEESSCCTTTCEEEEEECSSCCC---
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeC-CEECCCCCCEEEEeCC-----CEEEEEECCCChhhCEEEEEEECCceE---
Confidence 678999999999999999999 999999 8877766666665433 124799999999999999999999744
Q ss_pred EEEEEEEeccCC
Q psy16261 89 GVIKVYNIGYFG 100 (158)
Q Consensus 89 ~~~~l~v~~~~~ 100 (158)
.+.|.|...+.
T Consensus 90 -~~~l~V~~~P~ 100 (104)
T 2e6p_A 90 -FFGVTVQDPSG 100 (104)
T ss_dssp -CEEEEEECCCC
T ss_pred -EEEEEEcCCCC
Confidence 45566665543
No 60
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.57 E-value=5e-14 Score=98.12 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=63.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCC---eeEEEcCCCeee----------ec------CCeEEEEEeecccceEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKP---ITFWTHENGSLI----------HE------GSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~~~----------~~------~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.|.+.+.+.+|+++.|.|.+.+.+.+ .+.|++++.... .. ..|+..... .......+|.
T Consensus 9 ~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~--~~~~~~~~L~ 86 (226)
T 4f80_A 9 GPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRD--GITAGKAALR 86 (226)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECT--TGGGTEEEEE
T ss_pred CCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecc--cccCCeEEEE
Confidence 45667889999999999999887655 689998732211 00 012222211 1111235799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
|.+++.+|+|.|+|.|.|..|.....+.+.+...
T Consensus 87 I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~ 120 (226)
T 4f80_A 87 IHNVTASDSGKYLCYFQDGDFYEKALVELKVAAL 120 (226)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred EeeCchHHCeeEEEEEECCCcEEEEEEEEeeccc
Confidence 9999999999999999999887777666654443
No 61
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2.1e-14 Score=89.07 Aligned_cols=87 Identities=13% Similarity=0.151 Sum_probs=69.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
.+++.+.+.+|+.+.|.|.+.+.|.+ .+.|+|+ +..+..+.++.+...+ ..+.|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~-g~~i~~~~r~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 13 KRLKTMEVLEGESCSFECVLSHESASDPAMWTVG-GKTVGSSSRFQATRQG-----RKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp BCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSS-SSBCSBCSSCEEEEET-----TEEEEEECSCCTTTCSCEEEEETT
T ss_pred ecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEEC-CEECCCCCCEEEEEcC-----CEEEEEECCCCHHHCEEEEEEECC
Confidence 35567789999999999999998754 8999999 8888777777766544 124799999999999999998854
Q ss_pred CCCceEEEEEEEEeccCC
Q psy16261 83 TLGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~~ 100 (158)
......|.|...+.
T Consensus 87 ----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 87 ----LTSKASLIVRERSG 100 (104)
T ss_dssp ----EEEEECEEEECCCS
T ss_pred ----eeEEEEEEEeCCCc
Confidence 56677888877653
No 62
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.57 E-value=5.5e-14 Score=85.47 Aligned_cols=82 Identities=20% Similarity=0.271 Sum_probs=66.2
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+..+.+.+|+.+.|.|.+ +.|.+.+.|+++ +..+..+.++.+...+ ....|.|.+++.+|+|.|+|.+
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~-~~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 13 KKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRG-GSDISASNKYGLATEG-----TRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp BCCCCEEEETTSCEEEEEEC-SSSSCCCEEECS-SSEECSSTTCEEEEET-----TEEEEEESSCCTTCCSEEEEEE---
T ss_pred eCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEEC-CEECCCCCcEEEEEcC-----CEEEEEEcCCCcccCEEEEEEE---
Confidence 45667789999999999999 888999999999 8877777777665543 1247999999999999999999
Q ss_pred CCceEEEEEEEEe
Q psy16261 84 LGGSEGVIKVYNI 96 (158)
Q Consensus 84 ~g~~~~~~~l~v~ 96 (158)
|.....+.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 556666777664
No 63
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.57 E-value=1.6e-14 Score=97.54 Aligned_cols=127 Identities=13% Similarity=0.167 Sum_probs=87.6
Q ss_pred ceEEEecCCCEEEEeEEee--cCCCeeEEEcCCCeeee----------cCCeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 7 QLIGARLAAPLTLDCHVES--YPKPITFWTHENGSLIH----------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g--~p~p~i~W~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
..+.+.+|+.+.|.|...+ .+.+.+.|+|+ +..+. ...|+.+...+ +|.|.+++.+|+|
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~-~~~i~~~~~~~~~~~~~~r~~~~~~g--------sL~I~~v~~~D~G 74 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERG-STLVAEFKRKMKPFLKSGAFEILANG--------DLKIKNLTRDDSG 74 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEET-TEEEEEEETTSCCEESSTTEEECTTS--------CEEESSCCGGGCE
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeC-CceeEEEcCCCeecCCCCeEEECCCC--------cEEEcccccccCE
Confidence 3467889999999995434 56778999999 64432 33555554333 6999999999999
Q ss_pred EEEEEEEcCCCce--EEEEEEEEeccCCCCCccc----------------chhhh---------------hhhccccccc
Q psy16261 75 TYKCNAKNTLGGS--EGVIKVYNIGYFGSDTQYV----------------TDEEM---------------QRTNQIARSK 121 (158)
Q Consensus 75 ~Y~C~a~n~~g~~--~~~~~l~v~~~~~~~~~~~----------------~~~~~---------------~~~~~~~~~~ 121 (158)
.|+|.+.|..|.. ...+.|.|...+..+.... ..-.| ......+.|.
T Consensus 75 ~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~ 154 (176)
T 1hng_A 75 TYNVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAP 154 (176)
T ss_dssp EEEEEEEETTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSC
T ss_pred EEEEEEEeCCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeE
Confidence 9999999999986 6667777765432211100 00011 1222345566
Q ss_pred ccCcccceEeeeccCCceEEEEccccCC
Q psy16261 122 WGSERTNQIARSKWGSGYRYTSGPIRLP 149 (158)
Q Consensus 122 ~g~~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (158)
| .|.+.|..|.......+.++
T Consensus 155 Y-------~C~a~N~~g~~~~~~~l~~~ 175 (176)
T 1hng_A 155 F-------KCKAVNRVSQESEMEVVNCP 175 (176)
T ss_dssp E-------EEEEEETTEEEEEEECCCCC
T ss_pred E-------EEEEEecCCCceecccccCC
Confidence 6 99999999999999888775
No 64
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.56 E-value=2.2e-14 Score=107.32 Aligned_cols=131 Identities=17% Similarity=0.249 Sum_probs=95.2
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
+....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+... .++...... .|.|.++..+|.|.|+|.|.|..
T Consensus 228 ~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y~C~a~n~~ 298 (403)
T 3laf_A 228 PSNVIAIEGKDAVLECCVSGYPPPSFTWLRG-EEVIQLRSKKYSLLGGS--------NLLISNVTDDDSGTYTCVVTYKN 298 (403)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEET-TEECCCSSSSEEEETTT--------EEEECSCCGGGCEEEEEEEEETT
T ss_pred CCceEecCCCcEEEEEEcCCCCCCeEEEEEC-CeeccCCCceEEECCcc--------EEEEeCCCHHHCEEEEEEEEcCC
Confidence 4445678999999999999999999999999 7666543 344443333 69999999999999999999999
Q ss_pred CceEEEEEEEEeccCCC------------------------CCc---------cc-----------chhhhhhhcccccc
Q psy16261 85 GGSEGVIKVYNIGYFGS------------------------DTQ---------YV-----------TDEEMQRTNQIARS 120 (158)
Q Consensus 85 g~~~~~~~l~v~~~~~~------------------------~~~---------~~-----------~~~~~~~~~~~~~~ 120 (158)
|.....+.|.|...+.. +.. .+ ..+.+......+.|
T Consensus 299 g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G 378 (403)
T 3laf_A 299 ENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEG 378 (403)
T ss_dssp EEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCE
T ss_pred CceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCE
Confidence 98888777776543200 000 00 01122223344556
Q ss_pred cccCcccceEeeeccCCceEEEEccccCCCCC
Q psy16261 121 KWGSERTNQIARSKWGSGYRYTSGPIRLPDPS 152 (158)
Q Consensus 121 ~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (158)
.| .|.+.|..|....+..|.|..|+
T Consensus 379 ~Y-------~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 379 FY-------QCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp EE-------EEEEEETTEEEEEEEEEECCCC-
T ss_pred EE-------EEEEEcCCceEEEEEEEEEeCCC
Confidence 66 99999999999999999998775
No 65
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.56 E-value=8.1e-14 Score=88.32 Aligned_cols=92 Identities=22% Similarity=0.193 Sum_probs=66.3
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCCCeeee-----cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHENGSLIH-----EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYK 77 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 77 (158)
++..+.+.+|+.+.|.|.+.|.| .+.+.|+++ +..+. ...+...... ......+.|.|.+++.+|+|.|+
T Consensus 14 p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~I~~v~~~DsG~Y~ 90 (122)
T 3s35_X 14 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGS--EMKKFLSTLTIDGVTRSDQGLYT 90 (122)
T ss_dssp SCSCEEEEETCCEEEEEEEEECTTCCCEEEEECS-CTTCCHHHHBCCSCCEEEET--TEEEEEEEEEESSCCGGGCEEEE
T ss_pred CCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECC-CcccCCceeeeeccccccCC--ceeeEEEEEEECCCCcccCEEEE
Confidence 44556789999999999999944 568899998 54321 1111111100 01112347999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEeccC
Q psy16261 78 CNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 78 C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
|.|.|..|.....+.|.|...+
T Consensus 91 C~a~n~~g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 91 CAASSGLMTKKNSTFVRVHEKP 112 (122)
T ss_dssp EEEECSSCEEEEEEEEEEEEEE
T ss_pred EEEccCCCceEEEEEEEEeccC
Confidence 9999999999988998887764
No 66
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.56 E-value=1.4e-14 Score=97.96 Aligned_cols=86 Identities=34% Similarity=0.499 Sum_probs=67.0
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
..++..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++.+...+ ..|.|.+++.+|.|.|+|.+.
T Consensus 11 ~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 11 TTPLETVDALVEEVATFMCAVESYPQPEISWTRN-KILIKLFDTRYSIRENG-------QLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp SSCCCEEEEETTSCEEEECCEEEESCCEEEEEET-TEECCTTCTTEEEEGGG-------TEEEESSCCGGGCEEEEEEEE
T ss_pred ecCccceeeeCCCcEEEEeeCCCCCCCeEEEEEC-CEEccccCccEEEcCCc-------cEEEEcCCCcccCeEEEEEEE
Confidence 3456677899999999999999999999999999 776654 4566554333 259999999999999999999
Q ss_pred cCCCce-EEEEEEEEe
Q psy16261 82 NTLGGS-EGVIKVYNI 96 (158)
Q Consensus 82 n~~g~~-~~~~~l~v~ 96 (158)
|..|.. .....|.|.
T Consensus 83 ~~~~~~~~~~~~l~v~ 98 (192)
T 2iep_A 83 NGVGGAVESCGALQVK 98 (192)
T ss_dssp CSSSCCEEEEEEEEEE
T ss_pred cCCCceeEeEEEEEEE
Confidence 988874 444444443
No 67
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.55 E-value=2.9e-14 Score=88.37 Aligned_cols=86 Identities=14% Similarity=0.185 Sum_probs=67.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+..++..+.+.+|+.+.|.|.+.+.|.+ +.|+++ +..+....++.+...+ ..+.|.|.++..+|+|.|+|.|.
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~-g~~~~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 11 VLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKN-GVEVRPSKRITISHVG-----RFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp EEECCCCEEEESSCCEECCCEESCSSCE-EEEEES-SCBCCCCSSCEEEEET-----TEEEEEESSCCTTTCSCEEEEEE
T ss_pred EecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcC-CEECcCCCCEEEEEeC-----CEEEEEECCCCcCCCEEEEEEEc
Confidence 3456677889999999999999998888 999999 8877777777666443 12479999999999999999999
Q ss_pred cCCCceEEEEEEEEe
Q psy16261 82 NTLGGSEGVIKVYNI 96 (158)
Q Consensus 82 n~~g~~~~~~~l~v~ 96 (158)
|.. ......|.|.
T Consensus 84 n~~--~~~~~~l~V~ 96 (106)
T 2dlt_A 84 GYA--LSLSAKLNFL 96 (106)
T ss_dssp TSC--CCCCBCEEEE
T ss_pred cCC--ceEEEEEEEE
Confidence 983 3344444444
No 68
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.55 E-value=3.1e-14 Score=86.28 Aligned_cols=68 Identities=22% Similarity=0.327 Sum_probs=56.7
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
+.+.+|+.+.|.|.+.+ |.|.+.|+|+ +..+..+.++.+...+ ..+.|.|.++..+|+|.|+|.|.|.
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~-g~~i~~~~~~~i~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKD-GQEVEESDFVVLENEG-----PHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEET-TSCCCCCSSCEEEEET-----TEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEEC-CEEeeeeeeeeEEecC-----CeEEEEeCCCChhhcEEEEEEEcce
Confidence 34568999999999865 8889999999 8888888888776654 1247999999999999999998764
No 69
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.55 E-value=1.3e-13 Score=94.55 Aligned_cols=88 Identities=19% Similarity=0.251 Sum_probs=74.1
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+....+. .+.|.|.+++.+|.|.|+|.|.|..
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~N~~ 197 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKN-EKALAQTDHCNLKFEAGR----TAYFTINGVSTADSGKYGLVVKNKY 197 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEETTT----EEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCceEEEEEC-CeECccCCCEEEEEcCCC----EEEEEEcCcchHHCeEEEEEEEcCC
Confidence 34556788999999999999999999999999 888877777766654211 2479999999999999999999999
Q ss_pred CceEEEEEEEEec
Q psy16261 85 GGSEGVIKVYNIG 97 (158)
Q Consensus 85 g~~~~~~~l~v~~ 97 (158)
|.....+.|.|..
T Consensus 198 g~~~~~~~l~V~~ 210 (212)
T 2r15_A 198 GSETSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CcEEEEEEEEEEc
Confidence 9998888888764
No 70
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.55 E-value=9.3e-14 Score=84.79 Aligned_cols=81 Identities=22% Similarity=0.258 Sum_probs=64.1
Q ss_pred cCceEEEecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+..+.+.+|+.+.|.|.+. +.|.+.+.|+++ +....... .....+ .|.|.+++.+|+|.|+|.+.|.
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-~~~~~~~~--~~~~~~--------~L~i~~v~~~D~G~Y~C~a~n~ 84 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRL-HNGKLPSR--AMDFNG--------ILTIRNVQPSDAGTYVCTGSNM 84 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEG-GGBCCCTT--EEEETT--------EEEECSCCGGGCEEEEEEEECS
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeC-CCCCCCce--eecCCC--------EEEEeCCChhhCEEEEEEecCC
Confidence 34666789999999999998 689999999997 43322222 122223 7999999999999999999999
Q ss_pred CCceEEEEEEEEe
Q psy16261 84 LGGSEGVIKVYNI 96 (158)
Q Consensus 84 ~g~~~~~~~l~v~ 96 (158)
.|.....+.|.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 85 FAMDQGTATLHVQ 97 (98)
T ss_dssp SCEEEEEEEEEEC
T ss_pred CCccccEEEEEEe
Confidence 9998888888764
No 71
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.55 E-value=1.6e-13 Score=93.29 Aligned_cols=95 Identities=20% Similarity=0.179 Sum_probs=70.4
Q ss_pred eeecCceEEEecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecC--CeEEEEEeec--ccceEEEEEEEcCCCCCCCeEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEG--SRYHMWTEKF--SSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
+...+..+.+.+|+.+.|.|.+. +.|.+.+.|+++ +..+... .++++....+ ..+...+.|.|.+++..|+|.|
T Consensus 5 ~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 83 (195)
T 2c5d_C 5 FVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRD-GQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQY 83 (195)
T ss_dssp EEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEET-TEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEE
T ss_pred eccChhheEEecCCcEEEecccccCCCCcEEEEEEC-CEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEE
Confidence 45567788899999999999999 999999999999 8777655 2344432221 1122246899999999999999
Q ss_pred EEEEEcCCCceEE-EEEEEEec
Q psy16261 77 KCNAKNTLGGSEG-VIKVYNIG 97 (158)
Q Consensus 77 ~C~a~n~~g~~~~-~~~l~v~~ 97 (158)
+|.+.|..|.... .+.|.|..
T Consensus 84 ~C~~~~~~~~~~~~~~~l~V~~ 105 (195)
T 2c5d_C 84 QCLVFLGHQTFVSQPGYVGLEG 105 (195)
T ss_dssp EEEEEETTEEEECCCEEEEECC
T ss_pred EEEEEeCCCceecccEEEEEec
Confidence 9999998776533 25555544
No 72
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.54 E-value=1.6e-14 Score=97.65 Aligned_cols=83 Identities=25% Similarity=0.408 Sum_probs=67.4
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+....++.+.... +.|.|.+++..|.|.|+|.+.|..|.
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~~~~~~~~ 83 (192)
T 2va4_A 12 FNATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGSN-------TELTVRNIINSDGGPYVCRATNKAGE 83 (192)
T ss_dssp EEEETTSCCCEEEECEEECSSCCEEEEEET-TEECCCSSSEEEETTT-------TEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred cEEEEecCCCEEEEEeeccCCCCeEEEEEC-CeEcCCCccEEEeCCe-------eEEEEecCChhcCcEEEEEEEccccc
Confidence 345677899999999999999999999999 8877766666554322 26999999999999999999999888
Q ss_pred eEEEEEEEEec
Q psy16261 87 SEGVIKVYNIG 97 (158)
Q Consensus 87 ~~~~~~l~v~~ 97 (158)
....+.|.|..
T Consensus 84 ~~~~~~l~V~~ 94 (192)
T 2va4_A 84 DEKQAFLQVFV 94 (192)
T ss_dssp EEEEEEEEEEE
T ss_pred cceEEEEEEEc
Confidence 77666665543
No 73
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=8.5e-14 Score=87.90 Aligned_cols=83 Identities=20% Similarity=0.195 Sum_probs=65.8
Q ss_pred CCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy16261 15 APLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVY 94 (158)
Q Consensus 15 ~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 94 (158)
+...|.|.+.|.|.|.+.|+|+ +..+....+........ .....+.|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 98 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHN-GQPLRESKIIHVEYYQE-GEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGH 98 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEET-TEECCCSSSEEEEEEEC-SSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred cceEEEEEeeeeCCCeEEEEEC-CEECCCCCceeEEEecc-CccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEE
Confidence 5578999999999999999999 88877666554443221 112245799999999999999999999999999888887
Q ss_pred EeccC
Q psy16261 95 NIGYF 99 (158)
Q Consensus 95 v~~~~ 99 (158)
+...|
T Consensus 99 v~~~P 103 (118)
T 1wwc_A 99 FLKEP 103 (118)
T ss_dssp CSCCC
T ss_pred EccCC
Confidence 76654
No 74
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.54 E-value=2e-13 Score=92.31 Aligned_cols=91 Identities=19% Similarity=0.172 Sum_probs=70.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-CCeeEEEc-CCCeeee-cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-KPITFWTH-ENGSLIH-EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
+...+..+.+.+|+.+.|.|.+.+.| .+.+.|++ + +..+. ...++.+..... ..+.|.|.+++.+|+|.|+|
T Consensus 5 v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~-g~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C 79 (191)
T 1epf_A 5 VDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPN-GEKLSPNQQRISVVWNDD----DSSTLTIYNANIDDAGIYKC 79 (191)
T ss_dssp EEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTT-SCEECCBSSSEEEEEEET----TEEEEEECSCCGGGCEEEEE
T ss_pred EEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCC-CccccCCCCeEEEEECCC----CceEEEEccCCcccCEEEEE
Confidence 45667778899999999999999987 78999999 6 76665 445666554321 12479999999999999999
Q ss_pred EEEcCCC-ceEEEEEEEEec
Q psy16261 79 NAKNTLG-GSEGVIKVYNIG 97 (158)
Q Consensus 79 ~a~n~~g-~~~~~~~l~v~~ 97 (158)
.+.|..+ .....+.|.+..
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~ 99 (191)
T 1epf_A 80 VVTAEDGTQSEATVNVKIFQ 99 (191)
T ss_dssp EEEETTTEEEEEEEEEEEEC
T ss_pred EEEcCCCcceEEEEEEEeec
Confidence 9999984 445666666654
No 75
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1e-13 Score=85.32 Aligned_cols=88 Identities=17% Similarity=0.280 Sum_probs=70.9
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..++.+.+.+|+.+.|.|. .+.|.+.+.|+++ +..+....++.+...+ ..+.|.|.+++.+|+|.|+|.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~-~~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2dku_A 13 EELTNLQVEEKGTAVFTCK-TEHPAATVTWRKG-LLELRASGKHQPSQEG-----LTLRLTISALEKADSDTYTCD---- 81 (103)
T ss_dssp SCCCCEEEETTSEEEEEEE-CSSCCSCCEEEES-SCBCCSSSSEEEEEET-----TEEEEEEESCCTTTCSEEEEE----
T ss_pred ecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeC-CEECCCCCeEEEEeCC-----CEEEEEECCCCcccCEEEEEE----
Confidence 4556778999999999999 5889999999999 8877777777766433 123699999999999999998
Q ss_pred CCceEEEEEEEEeccCCCC
Q psy16261 84 LGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~~~~ 102 (158)
.|.....+.|.|...+..+
T Consensus 82 ~g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 82 IGQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp CSSCBCCEEEEEECSCCCC
T ss_pred eCCceEEEEEEEeCccCCC
Confidence 6667777888888776544
No 76
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.53 E-value=1.4e-13 Score=104.77 Aligned_cols=139 Identities=12% Similarity=0.115 Sum_probs=86.1
Q ss_pred CceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeeecCCeEEEEEeecc-cceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHVES-YPKPITFWTHENGSLIHEGSRYHMWTEKFS-SYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
+....+.+|+.+.|.|.+.| .|.|.+.|+++ +..+.....+.......+ .....+.|.|.+++.+|+|.|+|.|.|.
T Consensus 234 ~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 234 LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELE-NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp TTEEEEETTSCEEEEEEEEESSSCCCEEEEES-SSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCceEEeCCCeEEEEEEEEcCCCCcEEEEEEC-CEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 34567889999999999999 67799999999 666544332211111101 1222347999999999999999999998
Q ss_pred CCceEEEEEEEEeccCCC--------------------------CCc---------ccc--------hhhh--hhhcccc
Q psy16261 84 LGGSEGVIKVYNIGYFGS--------------------------DTQ---------YVT--------DEEM--QRTNQIA 118 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~~~--------------------------~~~---------~~~--------~~~~--~~~~~~~ 118 (158)
....+.|.|...+.. |.. .+. ...+ ......+
T Consensus 313 ---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D 389 (423)
T 3qs7_E 313 ---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQ 389 (423)
T ss_dssp ---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTC
T ss_pred ---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEeccccc
Confidence 555666666543210 000 000 0000 1122345
Q ss_pred cccccCcccceEeeeccCCceEEEEccccCCCCCCCC
Q psy16261 119 RSKWGSERTNQIARSKWGSGYRYTSGPIRLPDPSGDP 155 (158)
Q Consensus 119 ~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (158)
.|.| +|.|.|..|....+..|.+.++|++|
T Consensus 390 ~G~Y-------tC~A~N~~G~~~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 390 PGEY-------IFHAENDDAQFTKMFTLNIRSGTKHH 419 (423)
T ss_dssp CSCE-------EEEEEETTEEEEEEEEEC--------
T ss_pred CEEE-------EEEEEcCCceEEEEEEEEEecCCccc
Confidence 5666 99999999999999999988877765
No 77
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.53 E-value=2.7e-13 Score=84.84 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=68.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+..+.+.+|+.+.|.|.+.+. |.+.|+++ +..+..+.++.+...+ ..+.|.|.++..+|+|.|+|.|
T Consensus 24 ~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~-~~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a--- 92 (113)
T 2edh_A 24 EGLRNEEATEGATAVLRCELSKM--APVEWWKG-HETLRDGDRHSLRQDG-----ARCELQIRGLVAEDAGEYLCMC--- 92 (113)
T ss_dssp ECCCCCEECTTSCEEEEEEESSC--CCCEEEES-SSBCCCSSSEEEEEET-----TEEEEEECSCCSTTCEEEEEEE---
T ss_pred ccCCceEEeCCCeEEEEEEECCC--CcEEEEEC-CEECCCCCcEEEEECC-----CEEEEEECCCChhhCEEEEEEe---
Confidence 34556678899999999999775 78999999 8888777788776544 1347999999999999999999
Q ss_pred CCceEEEEEEEEeccCC
Q psy16261 84 LGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~~ 100 (158)
|.....+.|.|...+.
T Consensus 93 -~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 93 -GKERTSAMLTVRAMPS 108 (113)
T ss_dssp -TTEEEEEEEEECCCCC
T ss_pred -CCCCEEEEEEEeCCCC
Confidence 6677888888877653
No 78
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.53 E-value=9.2e-14 Score=85.23 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=66.1
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+.+|+.+.|.|.+. .|.|.+.|+++ +..+....++.+...+ ....|.|.++..+|+|.|+|.| |...
T Consensus 18 ~~v~~G~~v~l~C~~~-~p~~~v~W~k~-g~~i~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a----g~~~ 86 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA-DPKLEVKWYKN-GQEIRPSTKYIFEHKG-----CQRILFINNCQMTDDSEYYVTA----GDEK 86 (100)
T ss_dssp EEECTTEEEEEEEEES-CTTSCEEEEES-SCBCCCBTTEEEEEET-----TEEEEEEEEECTTTCCEEEEEE----TTEE
T ss_pred cEEcCCCcEEEEEEec-CCCceEEEEEC-CEECCCCCCEEEEecC-----CEEEEEEcCCCcCcCEEEEEEE----CCce
Confidence 5688999999999998 79999999999 8777766677766443 1236999999999999999999 6677
Q ss_pred EEEEEEEeccC
Q psy16261 89 GVIKVYNIGYF 99 (158)
Q Consensus 89 ~~~~l~v~~~~ 99 (158)
..+.|.|...|
T Consensus 87 ~~~~l~V~~~P 97 (100)
T 2yuv_A 87 CSTELFVRSGP 97 (100)
T ss_dssp EEEEEEECCSC
T ss_pred EEEEEEEecCC
Confidence 78888887754
No 79
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.53 E-value=4.7e-15 Score=94.27 Aligned_cols=91 Identities=23% Similarity=0.429 Sum_probs=70.7
Q ss_pred CceEEEecCCCEEEEeEEeecCCCe-eEEEcCCCeeeec--CCeEEEEEeecccceEEEEEEEcCCCCCCC-eEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPI-TFWTHENGSLIHE--GSRYHMWTEKFSSYKFYMRLYIGSLSKSDF-GTYKCNAK 81 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~-G~Y~C~a~ 81 (158)
+..+.+.+|+.+.|.|.+.|.|.|. +.|+++ +..+.. ..++.+.... ......+.|.|.+++.+|. |.|+|.|.
T Consensus 20 ~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~-~~~l~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~~G~Y~C~a~ 97 (122)
T 2cry_A 20 TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWK-ENVLESGTSGRYTVETIS-TEEGVISTLTISNIVRADFQTIYNCTAW 97 (122)
T ss_dssp ECCCCCCTTSCCCCCEEECCSSCCSEEEEESS-SCEECSEEETTEEEEEEE-ETTEEEEEEECTTCCHHHHHSCEEEEEE
T ss_pred CCeEEEecCCCEEEEEEEeecCCCcEeEEEEC-CEEccCCCCCCEEEEEec-CCCceEEEEEEcCCChhhCCceEEEEEE
Confidence 3445577899999999999999997 999999 776654 3566553221 1112245799999999999 99999999
Q ss_pred cCCCceEEEEEEEEecc
Q psy16261 82 NTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~ 98 (158)
|.+|.....+.|.|...
T Consensus 98 N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 98 NSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp CSSCEEEEEECCCCSCS
T ss_pred CCCCeEEEEEEEEECCC
Confidence 99999998888887754
No 80
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=89.09 Aligned_cols=85 Identities=13% Similarity=0.181 Sum_probs=65.1
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC----eEEEEEeecccceEEEEEEEcCCCCCCCeEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS----RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
..++..+.+.+|+.+.|.|.+.+.| +.+.|+++ +..+.... ++.+...+ ..+.|.|.++..+|+|.|+|
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~-g~~i~~~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C 84 (101)
T 2edk_A 12 VTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKN-GVELTREDSFKARYRFKKDG-----KRHILIFSDVVQEDRGRYQV 84 (101)
T ss_dssp EECCCCEEEESSCCCBCCEEESCSS-CCCEEEES-SCBCCCSCCSSCCCEEEECS-----SEEEEECSSCCGGGCSBEEE
T ss_pred EecCCceEEcCCCCEEEEEEEeCCC-CEEEEEEC-CEECCCCCCcceeEEEEECC-----CEEEEEECCCChhhCEEEEE
Confidence 3456667899999999999999988 99999999 77776554 55665443 13479999999999999999
Q ss_pred EEEcCCCceEEEEEEEEecc
Q psy16261 79 NAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 79 ~a~n~~g~~~~~~~l~v~~~ 98 (158)
.|.| ......|.|...
T Consensus 85 ~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 85 ITNG----GQCEAELIVEEK 100 (101)
T ss_dssp ECSS----CEECCBEEEECC
T ss_pred EEcC----CcEEEEEEEeCC
Confidence 9987 334445555543
No 81
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.52 E-value=2.9e-14 Score=98.57 Aligned_cols=86 Identities=17% Similarity=0.117 Sum_probs=62.7
Q ss_pred ceEEEecCCCEEEEeE---EeecCCCeeEEEcCCCeeeec-----------------CCeEEEEEeecccceEEEEEEEc
Q psy16261 7 QLIGARLAAPLTLDCH---VESYPKPITFWTHENGSLIHE-----------------GSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~---~~g~p~p~i~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
+.+.+..|+.+.|.|. +.+.|.+.+.|+|+ +..... ..++.+.... ....|.|.
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~I~ 74 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKL-GPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSA-----NTFFLVVT 74 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEE-ETTTEEEEEEEEETTEEEECGGGBTTEEEEEET-----TEEEEEES
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEc-CCCcceEEEEecCCceEEeeccccceEEEEEcC-----CEEEEEEc
Confidence 3567889999999995 56789999999998 432110 1122222222 12479999
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 67 SLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 75 ~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p 106 (203)
T 4fa8_A 75 AANISHDGNYLCRMKLGETEVTKQEHLSVVKP 106 (203)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred cCCHHHCeEEEEEEEcCCCcEEEEEEEEecCC
Confidence 99999999999999999998888777776553
No 82
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.52 E-value=3.5e-14 Score=98.30 Aligned_cols=79 Identities=19% Similarity=0.267 Sum_probs=65.6
Q ss_pred EEEecCCCEEEEeEEeec-CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVESY-PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+.|. |.|.+.|+|+ +..+..+.++.... ..+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 126 ~~v~~g~~v~l~C~v~g~~P~p~i~W~k~-g~~l~~~~~~~~~~-------~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 197 (207)
T 3rbs_A 126 WEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKD-------GICTLLITEFSKKDAGIYEVILKDDRGKD 197 (207)
T ss_dssp EEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCCCCCCCSS-------EEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred cEEcCCCcEEEEEEEeCCCCCCEEEEEEC-CEECCCCCceEcCC-------CEEEEEECCCCcccCEEEEEEEEcCCCEE
Confidence 467899999999999999 9999999999 88776655442111 12469999999999999999999999999
Q ss_pred EEEEEEEE
Q psy16261 88 EGVIKVYN 95 (158)
Q Consensus 88 ~~~~~l~v 95 (158)
.+.+.|.+
T Consensus 198 ~~~~~L~~ 205 (207)
T 3rbs_A 198 KSRLKLVD 205 (207)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 88888754
No 83
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.51 E-value=2.9e-14 Score=98.41 Aligned_cols=70 Identities=23% Similarity=0.411 Sum_probs=56.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCe-eEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPI-TFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+....+.+|+.+.|.|.+.+.|.+. +.|+++ +..+.... . .|.|.+++.+|+|.|+|.+
T Consensus 10 i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~-g~~l~~~~-------~--------~L~i~~v~~~D~G~Y~C~a 73 (204)
T 3sgj_C 10 VFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHN-ESLISSQA-------S--------SYFIDAATVDDSGEYRCQT 73 (204)
T ss_dssp EEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEET-TEEESCCS-------S--------EEEESSCCGGGCEEEEEEE
T ss_pred EEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEEC-CEEcccCc-------c--------EEEEecccccCCEEEEEEe
Confidence 44555556789999999999999998876 999999 77665432 2 6999999999999999999
Q ss_pred EcCCCce
Q psy16261 81 KNTLGGS 87 (158)
Q Consensus 81 ~n~~g~~ 87 (158)
.|...+.
T Consensus 74 ~n~~~s~ 80 (204)
T 3sgj_C 74 QLSTLSD 80 (204)
T ss_dssp TTSBCCC
T ss_pred CCCcccc
Confidence 9854433
No 84
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.51 E-value=1.1e-13 Score=85.13 Aligned_cols=85 Identities=19% Similarity=0.352 Sum_probs=68.5
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+..+.+.+|+.+.|.|.+.+.|.+ +.|+++ +..+..+.++.+...+ ..+.|.|.+++.+|+|.|+|.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~-~~~l~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2e7b_A 13 EALKDLEVLEGGAATLRCVLSSVAAP-VKWCYG-NNVLRPGDKYSLRQEG-----AMLELVVRNLRPQDSGRYSCS---- 81 (103)
T ss_dssp BCCCCEEEESSSCEEEEEECSSCCCS-CEEEES-SSBCCCSSSEEEEECS-----SEEEEEECSCCTTTCCCEEEE----
T ss_pred ecCccEEEECCCcEEEEEEEeCCCCC-eEEEEC-CEECCCCCcEEEEEcC-----CEEEEEEccCCcccCEEEEEE----
Confidence 34566789999999999999999999 999999 7777767777776554 134699999999999999998
Q ss_pred CCceEEEEEEEEeccC
Q psy16261 84 LGGSEGVIKVYNIGYF 99 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~ 99 (158)
.|.....+.|.|...+
T Consensus 82 ~g~~~~~~~l~V~~~p 97 (103)
T 2e7b_A 82 FGDQTTSATLTVTALP 97 (103)
T ss_dssp CSSCBCCBCEEEECCC
T ss_pred ECCcEEEEEEEEEecc
Confidence 4556666777777654
No 85
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=2.8e-13 Score=83.90 Aligned_cols=81 Identities=15% Similarity=0.185 Sum_probs=62.8
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
++..+.+.+|+.+.|.|.+ +.|.+.+.|+++ +..+..+ .++.+...+ . ...|.|.+++.+|+|.|+|.+.|
T Consensus 22 ~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~-g~~l~~~~~~~~~~~~~-~----~~~L~I~~v~~~D~G~Y~C~a~~- 93 (104)
T 1pd6_A 22 LEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKN-GQEIQMSGSKYIFESIG-A----KRTLTISQCSLADDAAYQCVVGG- 93 (104)
T ss_dssp CCSEEEEETTSCEEEEEEC-SSSSSCCEEEES-SSEECCCSSSSEEEEET-T----EEEEEECSCSSSSCEEEEEEETT-
T ss_pred CCCcEEEecCCCEEEEEEE-cCCCCEEEEEEC-CEECCCCCCeEEEEecC-C----EEEEEECCCCcccCEEEEEEECC-
Confidence 4444778999999999999 789999999999 8777766 677665443 1 34799999999999999999944
Q ss_pred CCceEEEEEEEEe
Q psy16261 84 LGGSEGVIKVYNI 96 (158)
Q Consensus 84 ~g~~~~~~~l~v~ 96 (158)
......|.|.
T Consensus 94 ---~~~~~~l~V~ 103 (104)
T 1pd6_A 94 ---EKCSTELFVK 103 (104)
T ss_dssp ---EEECCEEEEE
T ss_pred ---CcEEEEEEEe
Confidence 4444555553
No 86
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.51 E-value=3.8e-13 Score=93.10 Aligned_cols=72 Identities=15% Similarity=0.249 Sum_probs=58.5
Q ss_pred ceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 7 QLIGARLAAPLTLDCHVES-YPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
..+.+.+|+.+.|.|.+.+ .|.|.+.|+++ +..+..+.++.+.....+ ...+|.|.+++.+|+|.|+|.|.|
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kn-g~~l~~~~~~~~~~~~~~---g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNT---GIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEET-TEEECSSSSCEEEECTTT---CEEEEEESCCCGGGCEEEEEEEEE
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEEC-CEECccCCCEEEEEeCCC---CEEEEEECCCChhhCEEEEEEEEC
Confidence 3567889999999999964 79999999999 888877777666543211 134699999999999999999988
No 87
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=4.6e-14 Score=88.82 Aligned_cols=87 Identities=11% Similarity=0.091 Sum_probs=68.4
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..++.+.+.+|+.+.|.|.+.+.|.|.+.|+++ +..+..+.++.+....+.. +.|.|.++..+|+|.|+|.
T Consensus 18 ~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~----~~L~I~~v~~~D~G~Y~C~---- 88 (115)
T 2cr6_A 18 EDLEDVDVQEGSSATFRCRISPANYEPVHWFLD-KTPLHANELNEIDAQPGGY----HVLTLRQLALKDSGTIYFE---- 88 (115)
T ss_dssp ECCCEEEEETTSCEECCCEEESTTCCSCEEEES-SCEECCSSSCCBCCBTTTB----CCBEECSCCTTTCEEEEEE----
T ss_pred ccCccEEEeCCCcEEEEEEEcCCCCCccEEEEC-CEECCCCCcEEEEEcCCCE----EEEEEcCCChhhCEEEEEE----
Confidence 355677899999999999999999999999999 8877766665544221111 2699999999999999999
Q ss_pred CCceEEEEEEEEeccC
Q psy16261 84 LGGSEGVIKVYNIGYF 99 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~ 99 (158)
+|.....+.|.|...+
T Consensus 89 ~g~~~~~~~L~V~~~p 104 (115)
T 2cr6_A 89 AGDQRASAALRVTEKP 104 (115)
T ss_dssp ETTEECCEEEEEECCS
T ss_pred ECCeeEEEEEEEECCC
Confidence 4566777888887765
No 88
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.50 E-value=1.2e-12 Score=88.67 Aligned_cols=86 Identities=22% Similarity=0.417 Sum_probs=69.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEc--CCCeeee---cCCeEEEEEeecccceEEEEEEEcCCC-CCCCeEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTH--ENGSLIH---EGSRYHMWTEKFSSYKFYMRLYIGSLS-KSDFGTYKC 78 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~i~~v~-~~d~G~Y~C 78 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|++ + +..+. ...++.+.... ..+.|.|.++. .+|.|.|+|
T Consensus 98 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~-g~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~C 171 (190)
T 2wv3_A 98 HKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKEN-GVFEEISNSSGRFFIINKE-----NYTELNIVNLQITEDPGEYEC 171 (190)
T ss_dssp ECSEEEEETTSCEEEEEEEECSSCCEEEEEEEET-TEEEECCCTTSCEEEEECS-----SEEEEEECSCCTTTSCEEEEE
T ss_pred cCCcceeeCCCcEEEEEEeCccCCCceEEEEcCC-CceeeeecCCCeEEEecCC-----CeeEEEEEeccccCCCEEEEE
Confidence 3445568899999999999999999999999 5 66654 34566665433 12479999999 799999999
Q ss_pred EEEcCCCceEEEEEEEEe
Q psy16261 79 NAKNTLGGSEGVIKVYNI 96 (158)
Q Consensus 79 ~a~n~~g~~~~~~~l~v~ 96 (158)
.|.|..|.....+.|.|.
T Consensus 172 ~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 172 NATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSSCEEEEEEEEEEE
T ss_pred EEEecCCcceeEEEEEEE
Confidence 999999999888888775
No 89
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.50 E-value=2.3e-13 Score=98.57 Aligned_cols=92 Identities=20% Similarity=0.264 Sum_probs=65.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCC-CCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSK-SDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. .++......... .+.|.|.++.. .|+|.|+|.+
T Consensus 9 ~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~-g~~i~~-~~~~~~~~~~~~---~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 9 FIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKK-GKKVNS-QRFETIEFDESA---GAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSSCCEEEEC--------C-TTEEEEEETTTT---EEEEEECSCCTTTTCSEEEEEE
T ss_pred eeecCCceEecCCCeEEEEEEEEEeCCCeEEEEEC-CEECCC-CceEEEEecCCC---ceEEEEecccccCCCeEEEEEE
Confidence 34566777899999999999999999999999999 766643 344443322111 13799999998 9999999999
Q ss_pred EcCCCceEEEEEEEEecc
Q psy16261 81 KNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~~ 98 (158)
.|..|.....+.|.|...
T Consensus 84 ~n~~g~~~~~~~l~V~~~ 101 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLRE 101 (304)
T ss_dssp ECSSCEECCEEEEEEECG
T ss_pred ECCCCeEEEEEEEEEecc
Confidence 999998777777777653
No 90
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.50 E-value=4.2e-13 Score=96.97 Aligned_cols=89 Identities=17% Similarity=0.309 Sum_probs=73.8
Q ss_pred eEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcC-CCCCCCeEEEEEEEcCCCc
Q psy16261 8 LIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGS-LSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-v~~~d~G~Y~C~a~n~~g~ 86 (158)
.+.+..|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.... ....|.|.+ +...|.|.|+|.|.|..|.
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~ 186 (305)
T 2nzi_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQVIVTR-----SFTSLVFPNGVERKDAGFYVVCAKNRFGI 186 (305)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEES-SSBCCSSSSCEEEECS-----SEEEEEETTCCCSTTCEEEEEEEEETTEE
T ss_pred cEEecCCCEEEEEEEECCCCCCEEEEEEC-CEECCCCCcEEEEEcC-----CceEEEEecCCccCccEEEEEEEEeCCCc
Confidence 45678899999999999999999999999 7777766666655432 123799999 9999999999999999999
Q ss_pred eEEEEEEEEeccCCCC
Q psy16261 87 SEGVIKVYNIGYFGSD 102 (158)
Q Consensus 87 ~~~~~~l~v~~~~~~~ 102 (158)
....+.|.|...+..+
T Consensus 187 ~~~~~~l~v~~~P~~p 202 (305)
T 2nzi_A 187 DQKTVELDVADVPDPP 202 (305)
T ss_dssp EEEEEEEEEEBCCCCC
T ss_pred eeeEEEEEEecCCCCC
Confidence 9888988888766543
No 91
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.49 E-value=3e-13 Score=91.81 Aligned_cols=84 Identities=18% Similarity=0.343 Sum_probs=71.0
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcC-CCCCCCeEEEEEEEcCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGS-LSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-v~~~d~G~Y~C~a~n~~g 85 (158)
..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.... ..+.|.|.+ +..+|+|.|+|.|.|..|
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~C~a~N~~g 185 (197)
T 2j8h_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQVIVTR-----SFTSLVFPNGVERKDAGFYVVCAKNRFG 185 (197)
T ss_dssp EEEEEETTCCCEEEEEEEEESCCEEEEEES-SCEECSSSSCEEEECS-----SEEEEECTTCCCGGGCEEEEEEEEETTE
T ss_pred CeEEEeCCCEEEEEEEEEecCCCcEEEEEC-CEEeecCCCEEEEEcC-----CceEEEEeCCCCcccCEeEEEEEEeCCC
Confidence 345678899999999999999999999999 8877776777665433 124799999 999999999999999999
Q ss_pred ceEEEEEEEEe
Q psy16261 86 GSEGVIKVYNI 96 (158)
Q Consensus 86 ~~~~~~~l~v~ 96 (158)
.....+.|.|.
T Consensus 186 ~~~~~~~l~V~ 196 (197)
T 2j8h_A 186 IDQKTVELDVA 196 (197)
T ss_dssp EEEEEEEEEEE
T ss_pred cEeEEEEEEEe
Confidence 99888888875
No 92
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.49 E-value=2.6e-13 Score=91.84 Aligned_cols=84 Identities=23% Similarity=0.361 Sum_probs=70.5
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+...+ ..+.|.|.++..+|.|.|+|.|.|..|
T Consensus 110 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g 183 (194)
T 2a38_A 110 LQSMTVRQGSQVRLQVRVTGIPTPVVKFYRD-GAEIQSSLDFQISQEG-----DLYSLLIAEAYPEDSGTYSVNATNSVG 183 (194)
T ss_dssp CCCEEECTTEEEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEEET-----TEEEEEEEEECGGGCEEEEEEEEETTE
T ss_pred CccEEEcCCCEEEEEEEEEEecCCeEEEEEC-CEECCCCCcEEEEEcC-----CEEEEEECCCChhcCeEEEEEEEeCCC
Confidence 3455678899999999999999999999999 8887777777665543 123699999999999999999999999
Q ss_pred ceEEEEEEEE
Q psy16261 86 GSEGVIKVYN 95 (158)
Q Consensus 86 ~~~~~~~l~v 95 (158)
.....+.|.|
T Consensus 184 ~~~~~~~l~V 193 (194)
T 2a38_A 184 RATSTAELLV 193 (194)
T ss_dssp EEEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 9888888876
No 93
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.49 E-value=3.7e-13 Score=92.11 Aligned_cols=88 Identities=15% Similarity=0.226 Sum_probs=67.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeee------------ecCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLI------------HEGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
+..++..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+ ....++.... . .|.|.+++
T Consensus 4 v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~-~--------~L~i~~v~ 73 (212)
T 1f97_A 4 VYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFV-QGSTTALVCYNSQITAPYADRVTFSS-S--------GITFSSVT 73 (212)
T ss_dssp EECSCSEEEEETTCCEEEECEEESCSSEEEEEEEE-ETTEEEEEEETTEECGGGTTTEEEET-T--------EEEESCCC
T ss_pred EEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEEC-CCceeeEEecCCcccccccCcEEeec-e--------eEEEcccC
Confidence 34567788899999999999999999999999998 4332 1123444332 2 69999999
Q ss_pred CCCCeEEEEEEEcCCC--ceEEEEEEEEeccC
Q psy16261 70 KSDFGTYKCNAKNTLG--GSEGVIKVYNIGYF 99 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g--~~~~~~~l~v~~~~ 99 (158)
..|+|.|+|.+.|..| .....+.|.|...+
T Consensus 74 ~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p 105 (212)
T 1f97_A 74 RKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPP 105 (212)
T ss_dssp GGGCEEEEEEEEETTSSSEEEEEEEEEEEBCC
T ss_pred cccCeEEEEEEEccCCCcccEEEEEEEEEcCC
Confidence 9999999999999877 44556667666544
No 94
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=7.3e-13 Score=83.17 Aligned_cols=88 Identities=13% Similarity=0.129 Sum_probs=69.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC----------eEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS----------RYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
|..+++.+.+.+|+.+.|.|.+.+ .|.+.|+|+ +..+..+. ++.+...+ ..++|.|.+++.+
T Consensus 11 ~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~kn-G~~l~~~~~~~~~~~~~~r~~i~~~g-----~~~~L~I~~v~~~ 82 (112)
T 2e6q_A 11 LVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLN-GEELKSNEPEGQVEPGALRYRIEQKG-----LQHRLILHAVKHQ 82 (112)
T ss_dssp EEECCCCEEEETTCEEEEEEEESS--CCCCEEEES-SCBCCSSCCCTTSCTTSCEEEECCBT-----TEEEEEEESCCST
T ss_pred EecCCCCeEEcCCCcEEEEEEECC--CCeEEEEEC-CEECccCcccccccccccEEEEEeCC-----cEEEEEECCCCHH
Confidence 345567788999999999999997 778999999 88888776 77765433 1347999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEeccCC
Q psy16261 72 DFGTYKCNAKNTLGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 100 (158)
|+|.|+|..-+ ....+..|.|...|.
T Consensus 83 D~G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 83 DSGALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp TCSEEEEEEET---TEEEEEEEEEECSSC
T ss_pred HCccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 99999875544 345678888887653
No 95
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.48 E-value=2.2e-13 Score=91.77 Aligned_cols=75 Identities=23% Similarity=0.392 Sum_probs=57.2
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec--CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE--GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
..+....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++...... .|.|.+++.+|.|.|+|.+.
T Consensus 7 ~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 7 EVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANN--------NLQILNINKSDEGIYRCEGR 77 (189)
T ss_dssp ECCSSEEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTS--------CEEETTCCGGGCEEEEEEEE
T ss_pred ccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEEC-CccceeccCCeEEEecCC--------CEEEeeCCHhHCcEEEEEEE
Confidence 455667799999999999999999999999999 655542 3455444433 69999999999999999999
Q ss_pred cCCCce
Q psy16261 82 NTLGGS 87 (158)
Q Consensus 82 n~~g~~ 87 (158)
|..+..
T Consensus 78 ~~~~~~ 83 (189)
T 2v5t_A 78 VEARGE 83 (189)
T ss_dssp ETTTTE
T ss_pred EcCCCc
Confidence 987544
No 96
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.48 E-value=7.8e-13 Score=81.87 Aligned_cols=93 Identities=13% Similarity=0.199 Sum_probs=64.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCCCeeeecCCeEEEEEeec---ccceEEEEEEEcCCCCCCCeEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP--KPITFWTHENGSLIHEGSRYHMWTEKF---SSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
|...+....+.+|+.+.|.|.+.+.| .+.+.|+++ +..+............. ......+.|.|.+++.+|+|.|
T Consensus 13 i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 91 (112)
T 3so5_A 13 ITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXD-NEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXY 91 (112)
T ss_dssp EEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEET-TEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEE
T ss_pred EEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccC-CcccccccccceeeeeccCCCccccceEEEEeccccccCCeE
Confidence 34456667789999999999999654 579999999 76664432111111100 0111135899999999999999
Q ss_pred EEEEEcCCCce-EEEEEEEE
Q psy16261 77 KCNAKNTLGGS-EGVIKVYN 95 (158)
Q Consensus 77 ~C~a~n~~g~~-~~~~~l~v 95 (158)
+|.|.|..|.. +..+.|.|
T Consensus 92 ~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 92 QCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEETTEEEECCCEEEEE
T ss_pred EEEEEeCCCcEEEeEEEEEe
Confidence 99999999874 45666654
No 97
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.48 E-value=4e-13 Score=97.37 Aligned_cols=87 Identities=20% Similarity=0.250 Sum_probs=73.4
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+....+ ..+.|.|.+++.+|+|.|+|.|.|..|
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~-g~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g 303 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKN-EKALASDDHCNLKFEAG----RTAYFTINGVSTADSGKYGLVVKNKYG 303 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEES-SSEECCCSSEEECCBTT----TEEEEEEBSCCSTTCEEEEEEEEETTE
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEEC-CEeCCCCCcEEEEEcCC----CEEEEEECCCCHHHCEEEEEEEEeCCC
Confidence 4566789999999999999999999999999 88887777766654421 124799999999999999999999999
Q ss_pred ceEEEEEEEEec
Q psy16261 86 GSEGVIKVYNIG 97 (158)
Q Consensus 86 ~~~~~~~l~v~~ 97 (158)
.....+.|.|..
T Consensus 304 ~~~~~~~l~V~~ 315 (317)
T 2y25_A 304 SETSDFTVSVFI 315 (317)
T ss_dssp EEEEEEEEEEEC
T ss_pred eEEEEEEEEEEc
Confidence 999888888864
No 98
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.48 E-value=1.9e-13 Score=85.99 Aligned_cols=91 Identities=24% Similarity=0.399 Sum_probs=62.0
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC-----eEEEEEeecccceEEEEEEEcCCCCCCCeEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS-----RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYK 77 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 77 (158)
...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.... +......+ ......+.+.+++.+|+|.|+
T Consensus 13 ~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~v~~~D~G~Y~ 88 (117)
T 2v9t_A 13 VEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPSG---SLFFLRIVHGRKSRPDEGVYV 88 (117)
T ss_dssp EECCCCEEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCSSCSEEECTTS---CEEESSCCCBTTBCSSCEEEE
T ss_pred EcCCCCEEEcCCCcEEEEEECCccCCCeEEEEEC-CEeccccCCCCcceeEEecCC---cEEEEEEEeCCCCcCcCEEEE
Confidence 3456667789999999999999999999999999 76665331 12221121 100111223356899999999
Q ss_pred EEEEcCCCceEE-EEEEEEec
Q psy16261 78 CNAKNTLGGSEG-VIKVYNIG 97 (158)
Q Consensus 78 C~a~n~~g~~~~-~~~l~v~~ 97 (158)
|.|.|..|...+ .+.|.+..
T Consensus 89 C~a~N~~G~~~s~~~~l~~~~ 109 (117)
T 2v9t_A 89 CVARNYLGEAVSHDASLEVAA 109 (117)
T ss_dssp EEEEETTEEEECCCEEEEEC-
T ss_pred EEEEeCccceEeeeEEEEhhh
Confidence 999999998754 45555543
No 99
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.47 E-value=2.8e-13 Score=101.44 Aligned_cols=81 Identities=23% Similarity=0.362 Sum_probs=70.0
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+. .+ .|.|.++..+|+|.|+|.|.|.+|
T Consensus 302 ~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~-~~--------~L~i~~v~~~D~G~Y~C~A~N~~G 371 (384)
T 3kld_A 302 INDIHVAMEESVFWECKANGRPKPTYRWLKN-GDPLLTRDRIQIE-QG--------TLNITIVNLSDAGMYQCVAENKHG 371 (384)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCEEEEEET-TEECCCBTTEEEE-TT--------EEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCceEecCCCCEEEEeECCccCCCeEEEEEC-CEECCCCccEEEe-CC--------EEEEeecChhhCEEEEEEEEeCCc
Confidence 3456688999999999999999999999999 8877666666543 23 699999999999999999999999
Q ss_pred ceEEEEEEEEe
Q psy16261 86 GSEGVIKVYNI 96 (158)
Q Consensus 86 ~~~~~~~l~v~ 96 (158)
...+...|.|.
T Consensus 372 ~~~~~a~L~V~ 382 (384)
T 3kld_A 372 VIFSSAELSVI 382 (384)
T ss_dssp EEEEEEEEEEC
T ss_pred eEEeceEEEEe
Confidence 99999888875
No 100
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.47 E-value=9.9e-13 Score=100.12 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=63.0
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+..+.+.+|+.+.|.|.+.+.|.|.+.|+++ +..+.....+.... ....+|.|.+++.+|+|.|+|.|.|..
T Consensus 54 ~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~-~~~l~~~~~~~~~~------~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 126 (423)
T 3qs7_E 54 EAAAVEVDVSASITLQVLVDAPGNISCLWVFK-HSSLNCQPHFDLQN------RGVVSMVILKMTETQAGEYLLFIQSEA 126 (423)
T ss_dssp --CEEEECSSCCEEEEEECSCCSSCEEEEEET-TEEECCCCBC-----------CEEEEEESSCCSSSCSEEEEEEEC--
T ss_pred ccccEEEecCCcEEEEEEEEcCCCCeEEEEEC-CCccCccceecccc------ceEEEEEEeecCcccCEEEEEEEEcCC
Confidence 34477899999999999999999999999999 65554322221111 112369999999999999999999999
Q ss_pred CceEEEEEEEEec
Q psy16261 85 GGSEGVIKVYNIG 97 (158)
Q Consensus 85 g~~~~~~~l~v~~ 97 (158)
|.....+.|.|..
T Consensus 127 g~~~~~~~l~V~~ 139 (423)
T 3qs7_E 127 TNYTILFTVSIRN 139 (423)
T ss_dssp CEEEEEEEEEEC-
T ss_pred CcEEEEEEEEEec
Confidence 9888888877763
No 101
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.47 E-value=1.2e-13 Score=101.02 Aligned_cols=85 Identities=20% Similarity=0.353 Sum_probs=66.0
Q ss_pred eEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 8 LIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
...+.+|+.+.|.|.+.|.|.+.+.|+++ +..+....++......... +.|.|.+++.+|.|.|+|.+.|..|..
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~----~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 206 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQQ----WSLVMESVVPSDRGNYTCVVENKFGSI 206 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBT-TBCCCTTSSTTCCCCCTTT----TEEEECSCCGGGCCCEEEEEEETTEEE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEEC-CEECcccccccceecccce----EEEEECCCCcccCEEEEEEEEeCCCCE
Confidence 35678899999999999999999999999 7666544332111111111 269999999999999999999999988
Q ss_pred EEEEEEEEec
Q psy16261 88 EGVIKVYNIG 97 (158)
Q Consensus 88 ~~~~~l~v~~ 97 (158)
...+.|.|..
T Consensus 207 ~~~~~l~V~~ 216 (334)
T 1ry7_B 207 RQTYTLDVLE 216 (334)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEec
Confidence 8888888775
No 102
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.47 E-value=7.4e-13 Score=82.14 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=66.2
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+..+.+.+|+.+.|.|.+.+. |.+.|+++ +..+..+.++.+...+ ..+.|.|.+++.+|+|.|+|.+.|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~-~~~~~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~n- 83 (108)
T 2dm7_A 13 QDLKTKEASEGATATLQCELSKV--APVEWKKG-PETLRDGGRYSLKQDG-----TRCELQIHDLSVADAGEYSCMCGQ- 83 (108)
T ss_dssp SCCBCCEEETTSCEEEEEEBSSS--CCCEEESS-SSBCCSSSSCEEEEET-----TEEEEEESSCCTTTCSEEEEEETT-
T ss_pred ecCCcEEEeCCCcEEEEEEeCCC--CeeEEEEC-CEECCCCCCEEEEecC-----CEEEEEECCCCcccCEEEEEEEcC-
Confidence 34566779999999999999775 68999999 7777777777766544 124699999999999999999944
Q ss_pred CCceEEEEEEEEeccC
Q psy16261 84 LGGSEGVIKVYNIGYF 99 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~~ 99 (158)
....+.|.|...+
T Consensus 84 ---~~~~~~l~V~~~p 96 (108)
T 2dm7_A 84 ---ERTSATLTVRALP 96 (108)
T ss_dssp ---EEEEEECEEECCC
T ss_pred ---CEEEEEEEEecCC
Confidence 5667777777654
No 103
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=8.4e-13 Score=82.48 Aligned_cols=80 Identities=20% Similarity=0.292 Sum_probs=64.0
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+.+|+.+.|.|.+. .|.+.+.|+++ +..+....++.+...+ ....|.|.+++.+|+|.|+|.+.| ..
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~-g~~~~~~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~n----~~ 91 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKD-GEEVVESPALLLQKED-----TVRRLVLPAVQLEDSGEYLCEIDD----ES 91 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEET-TEECCCBTTBEEEECS-----SEEEEEESSCCTTTCEEEEEESSS----CE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEEC-CEECccCCCEEEEECC-----CEEEEEECCCCcccCEEEEEEEec----Cc
Confidence 5678899999999995 78899999999 8877766666655432 123799999999999999999998 45
Q ss_pred EEEEEEEeccC
Q psy16261 89 GVIKVYNIGYF 99 (158)
Q Consensus 89 ~~~~l~v~~~~ 99 (158)
..+.|.|...+
T Consensus 92 ~~~~l~V~~~p 102 (113)
T 2cpc_A 92 ASFTVTVTEPP 102 (113)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEEecCC
Confidence 66777777654
No 104
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.47 E-value=9.8e-14 Score=108.41 Aligned_cols=81 Identities=11% Similarity=0.025 Sum_probs=64.9
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+.+|+.+.|.|.+.|.|.|.+.|+|+ +..+....++.. .. ..|.|.+++.+|+|.|+|.|.|..|...
T Consensus 336 ~~v~~G~~v~L~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~-~~--------~~L~I~~v~~~D~G~YtC~A~N~~g~~~ 405 (527)
T 3qs9_E 336 YEIDQYEEFCFSVRFKAYPQIRCTWTFS-RKSFPCEQKGLD-NG--------YSISKFCNHKHQPGEYIFHAENDDAQFT 405 (527)
T ss_dssp ECCCTTCCCCEEEEEEEESCCEEEEEET-TEEEECBCCBCS-SS--------SEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred EEEcCCCeEEEEEEEEecCCCEEEEEEC-CEECcCCccccc-CC--------cEEEEecCCcccCEEEEEEEEeCCCcEE
Confidence 4567899999999999999999999999 887765443211 11 1699999999999999999999999988
Q ss_pred EEEEEEEeccC
Q psy16261 89 GVIKVYNIGYF 99 (158)
Q Consensus 89 ~~~~l~v~~~~ 99 (158)
..+.|.|...|
T Consensus 406 ~~~~L~V~~~P 416 (527)
T 3qs9_E 406 KMFTLNIRRKP 416 (527)
T ss_dssp EEEEEC--CCC
T ss_pred EEEEEEEecCC
Confidence 88888776543
No 105
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.47 E-value=3.3e-13 Score=91.40 Aligned_cols=78 Identities=19% Similarity=0.324 Sum_probs=61.9
Q ss_pred EEEec-CCCEEEEeEEeecCC--CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 9 IGARL-AAPLTLDCHVESYPK--PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 9 ~~~~~-g~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
..+.+ |+.+.|.|.+.+.|. +.+.|+++ +..+....... . .+.|.|.+++.+|+|.|+|.+.|. +
T Consensus 12 ~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~-~~~~~~~~~~~--~--------~~~L~i~~~~~~d~G~Y~C~~~n~-~ 79 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKN-GVELTATRKNA--S--------NMEYRINKPRAEDSGEYHCVYHFV-S 79 (190)
T ss_dssp EECCCSSSCEEEEEEEEECSSCEEEEEEEET-TEECTTCCBCC--S--------EEEEEESSCCGGGCEEEEEEEEET-T
T ss_pred EEEccCCceEEEEEEeccCCCCceEEEEEEC-CEECcccceEe--c--------cEEEEEecCCcccCEEEEEEEEeC-C
Confidence 44556 999999999999887 78999999 77765543321 1 237999999999999999999999 8
Q ss_pred ceEEEEEEEEecc
Q psy16261 86 GSEGVIKVYNIGY 98 (158)
Q Consensus 86 ~~~~~~~l~v~~~ 98 (158)
.....+.|.|...
T Consensus 80 ~~~~~~~l~V~~~ 92 (190)
T 2wv3_A 80 APKANATIEVKAA 92 (190)
T ss_dssp EEEEEEEEEEECC
T ss_pred cccccEEEEEecC
Confidence 7777777776654
No 106
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.46 E-value=1.5e-13 Score=102.77 Aligned_cols=82 Identities=23% Similarity=0.276 Sum_probs=65.9
Q ss_pred eEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 8 LIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
...+.+|+.+.|.|.+.|.|.|.+.|+++ +..+........... +.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~--------~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 301 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKK-GGDLPSDKAKFENFN--------KALRITNVSEEDSGEYFCLASNKMGSI 301 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEET-TBCCCTTTEEEEGGG--------TEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEEC-CEECCCCcccccccC--------ceEEEccCCHhHCEEEEEEEEeCCCcE
Confidence 35688999999999999999999999999 776655443211111 269999999999999999999999988
Q ss_pred EEEEEEEEecc
Q psy16261 88 EGVIKVYNIGY 98 (158)
Q Consensus 88 ~~~~~l~v~~~ 98 (158)
...+.|.|...
T Consensus 302 ~~~~~l~V~~~ 312 (404)
T 3p3y_A 302 RHTISVRVKAA 312 (404)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEeCC
Confidence 88877776654
No 107
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.46 E-value=8.5e-13 Score=86.27 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=69.6
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC--------CeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN--------GSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 75 (158)
..+..+.+.+|+++.|.|.+.+.|.+.+.|++.+ +..+ ...++....... ...+|.|.+++.+|+|.
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~~~----~~~~L~I~~v~~~DsG~ 117 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTSTP----HELSISISNVALADEGE 117 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEECS----SEEEEEECSCCGGGCEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceec-ccCCEEEecCCC----CeEEEEECCCChhhCEE
Confidence 3456678999999999999999998999999531 2222 234555443221 12479999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEeccCCCC
Q psy16261 76 YKCNAKNTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 76 Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 102 (158)
|+|.+.|. |.....+.|.|...|..|
T Consensus 118 Y~C~~~n~-~~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 118 YTCSIFTM-PVRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp EEEEECSS-SCEEEEEEEEEECCCC--
T ss_pred EEEEEEcC-CCceEEEEEEEEeCCCCC
Confidence 99999999 888888999988766443
No 108
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=5.3e-14 Score=85.67 Aligned_cols=79 Identities=23% Similarity=0.423 Sum_probs=61.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+....+.+|+.+.|.|.+.+.|.|.+.|+++ +..+.... .. .|.|.+++.+|+|.|+|.+.|
T Consensus 14 ~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~~------~~--------~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 14 VVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKD-GVPLPLPP------SP--------VLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp EEESTTSEECTTCEEEEECCCSSCSSCCCCCEES-SSBCSSCC------CS--------EEEEESCCTTTCEEEECEECC
T ss_pred EECCCCCEEcCCCeEEEEEEEccCCCCEEEEEEC-CEECcCCC------CC--------EEEECCCCcccCEEEEEEEEe
Confidence 3455556688999999999999999999999999 76654432 11 699999999999999999999
Q ss_pred CCCceEE--EEEEEEe
Q psy16261 83 TLGGSEG--VIKVYNI 96 (158)
Q Consensus 83 ~~g~~~~--~~~l~v~ 96 (158)
..+.... .+.|.|.
T Consensus 79 ~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 79 SSHGPQESRAVSISII 94 (96)
T ss_dssp SSCCCEECCCEEEEEC
T ss_pred CCCCcEEEEEEEEEEe
Confidence 7665433 4555543
No 109
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.46 E-value=7.2e-13 Score=85.72 Aligned_cols=83 Identities=23% Similarity=0.337 Sum_probs=61.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec----------CCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE----------GSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
+...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++...... .....+.|.|.+++.+
T Consensus 24 ~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~~ 100 (137)
T 3qr2_A 24 FVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFE-GQGPNDICSQLWDGARLDRVHIHATY--HQHAASTISIDTLVEE 100 (137)
T ss_dssp EEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEE-ESSTTCCCEECCTTHHHHTEEEEEEE--SSSEEEEEEECSCCGG
T ss_pred EEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEEC-CCCccccceeecccCcccceEEeccc--ccccceEEEECCCCcc
Confidence 34456777889999999999999999999999998 543321 1233332211 1112358999999999
Q ss_pred CCeEEEEEEEcCCCce
Q psy16261 72 DFGTYKCNAKNTLGGS 87 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~ 87 (158)
|+|.|+|.|.|..|..
T Consensus 101 D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 101 DTGTYECRASNDPDRN 116 (137)
T ss_dssp GCEEEEEEEECCTTSS
T ss_pred cCEEEEEEEEecCCcc
Confidence 9999999999999976
No 110
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.46 E-value=2.6e-13 Score=91.73 Aligned_cols=85 Identities=28% Similarity=0.435 Sum_probs=69.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+....++.....+ .|.|.++..+|+|.|+|.|.|..
T Consensus 106 ~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y~C~a~n~~ 176 (192)
T 2iep_A 106 PPINVKIIEGLKAVLPCTTMGNPKPSVSWIKG-DSALRENSRIAVLESG--------SLRIHNVQKEDAGQYRCVAKNSL 176 (192)
T ss_dssp CCCCEEEETTSCEEECCEEEEESCCEEEEEET-TEECCCCSSEEECTTS--------CEEESSCCGGGCEEEEEEEEETT
T ss_pred CCcceEEeCCCcEEEEEEEeccCCceEEEEeC-CEEccCCCcEEEecCC--------cEEEecCChhhCEEEEEEEEcCC
Confidence 34456788999999999999999999999999 8777766666554444 69999999999999999999999
Q ss_pred CceE-EEEEEEEecc
Q psy16261 85 GGSE-GVIKVYNIGY 98 (158)
Q Consensus 85 g~~~-~~~~l~v~~~ 98 (158)
|... ..+.|.|..+
T Consensus 177 g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 177 GTAYSKLVKLEVEVF 191 (192)
T ss_dssp EEEECCCEEEEEEC-
T ss_pred CcEEEEEEEEEEEeC
Confidence 9873 4577777654
No 111
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.45 E-value=7.4e-13 Score=102.66 Aligned_cols=89 Identities=18% Similarity=0.206 Sum_probs=69.7
Q ss_pred eEEEecCCCEEEEeEEeecCCCe-eEEEcCCCeeeecCC-eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 8 LIGARLAAPLTLDCHVESYPKPI-TFWTHENGSLIHEGS-RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
...+.+|+.+.|.|.+.|.|.|. +.|+++ +..+.... ++...... +.+...+.|.|.+++.+|+|.|+|.|.|..|
T Consensus 322 ~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~-g~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 399 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEYEAFPKPEHQQWIYM-NRTFTDKWEDYPKSENE-SNIRYVSELHLTRLKGTEGGTYTFLVSNSDV 399 (524)
T ss_dssp EEEECTTCCEEEEEEEEEESCCCEEEEESS-SCBCSSSBCCEESCCSS-SCCEEEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eEEEcCCCcEEEEEEEeecCCCcEEEEEEC-CeeccCCccceeEEccC-CCceeEEEEEEeecCcccCeEEEEEEEecCc
Confidence 56788999999999999999999 999999 77665543 33222211 2233456899999999999999999999999
Q ss_pred ceEEEEEEEEecc
Q psy16261 86 GSEGVIKVYNIGY 98 (158)
Q Consensus 86 ~~~~~~~l~v~~~ 98 (158)
.....+.|.|...
T Consensus 400 ~~~~~~~l~V~~~ 412 (524)
T 2ec8_A 400 NAAIAFNVYVNTK 412 (524)
T ss_dssp EEEEEEEEEECEE
T ss_pred eEEEEEEEEEecC
Confidence 9888887776643
No 112
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.44 E-value=1.7e-12 Score=87.80 Aligned_cols=85 Identities=18% Similarity=0.336 Sum_probs=71.2
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCC-CCCeEEEEEEEcCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSK-SDFGTYKCNAKNTLG 85 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~a~n~~g 85 (158)
....+.+|+.+.|.|.+.+.|.|.+.|+++ +..+....++.+.... ..+.|.|.++.. +|.|.|+|.|.|..|
T Consensus 111 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~-~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~C~a~n~~g 184 (197)
T 3lcy_A 111 EKYYGAVGSTLRLHVMYIGRPVPAMTWFHG-QKLLQNSENITIENTE-----HYTHLVMKNVQRKTHAGKYKVQLSNVFG 184 (197)
T ss_dssp SEEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEECS-----SEEEEEESSCCHHHHCEEEEEEEECSSC
T ss_pred cceeecCCCeEEEEEEEeeeeCCeeEEeEC-CEECCCCCceEEEEcC-----CEEEEEEccccchhhCceEEEEEEcCcC
Confidence 345678899999999999999999999999 8888777776665543 124799999995 899999999999999
Q ss_pred ceEEEEEEEEec
Q psy16261 86 GSEGVIKVYNIG 97 (158)
Q Consensus 86 ~~~~~~~l~v~~ 97 (158)
.....+.|.|.+
T Consensus 185 ~~~~~~~l~V~~ 196 (197)
T 3lcy_A 185 TVDAILDVEIQD 196 (197)
T ss_dssp EEEEEEEEEEEC
T ss_pred ceEEEEEEEEec
Confidence 999888888764
No 113
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.44 E-value=2e-12 Score=92.82 Aligned_cols=92 Identities=18% Similarity=0.042 Sum_probs=67.6
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
....+.+|+.+.|.|.+.|.|.|.+.|+++ +......................+.|.|.+++.+|+|.|+|.|.|..|.
T Consensus 189 ~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 267 (289)
T 3mjg_X 189 VQTVVRQGENITLMCIVIGNEVVNFEWTYP-RKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVND 267 (289)
T ss_dssp SCSEEETTSCEEEEEEEESCSSBEEEEECT-TSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTT
T ss_pred CcceeEcCCCEEEEEEECCCCCcceEEEcC-CccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCC
Confidence 335588999999999999999999999987 4432211111111111011233458999999999999999999999999
Q ss_pred eEEEEEEEEeccC
Q psy16261 87 SEGVIKVYNIGYF 99 (158)
Q Consensus 87 ~~~~~~l~v~~~~ 99 (158)
....+.|.+...+
T Consensus 268 ~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 268 HQDEKAINITVVE 280 (289)
T ss_dssp EEEEEEEEEEEEC
T ss_pred ceeEEEEEEEEEe
Confidence 9999888887765
No 114
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.44 E-value=2e-12 Score=86.95 Aligned_cols=88 Identities=22% Similarity=0.337 Sum_probs=68.5
Q ss_pred cCceEEEecCCCEEEEeEEeecC-CCeeEEEc---CCCeeeecC--CeEEEEEeecccceEEEEEEEcCCC-CCCCeEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP-KPITFWTH---ENGSLIHEG--SRYHMWTEKFSSYKFYMRLYIGSLS-KSDFGTYK 77 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~v~-~~d~G~Y~ 77 (158)
.+....+.+|+.+.|.|.+.|.| .|.+.|++ ++...+... .++.+...+ ..+.|.|.+++ .+|+|.|+
T Consensus 89 ~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~~d~G~Y~ 163 (184)
T 3b5h_A 89 VKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQ-----GRSELHIENLNMEADPGQYR 163 (184)
T ss_dssp SCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEET-----TEEEEEECSCCTTTSSEEEE
T ss_pred cCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecC-----CeeEEEEeeccccccCceEE
Confidence 34455688999999999999999 79999999 524444322 566555433 12479999999 99999999
Q ss_pred EEEEcCCCceEEEEEEEEec
Q psy16261 78 CNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 78 C~a~n~~g~~~~~~~l~v~~ 97 (158)
|.|.|..|.....+.|.|..
T Consensus 164 C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 164 CNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEEETTEEEEEEEEEEEC-
T ss_pred EEEEeCCCcceEEEEEEEec
Confidence 99999999998888888754
No 115
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.44 E-value=5.6e-13 Score=92.41 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=64.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+..... +.|.|.+++..|+|.|+|.+.
T Consensus 21 i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C~~~ 85 (218)
T 3k0w_A 21 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKM-NKEIPNGNT--------------SELIFNAVHVKDAGFYVCRVN 85 (218)
T ss_dssp EEECCCCEEEETTSBEEEECEETTTTSSEEEEEET-TEECTTCCS--------------SEEEETTCCGGGCEEEEEEEE
T ss_pred EEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEEC-CEECCCCCC--------------CEEEEccCChhhCeEeEEEEE
Confidence 45677788899999999999999999999999999 766544321 169999999999999999999
Q ss_pred cCCCce-EEEEEEEEec
Q psy16261 82 NTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 82 n~~g~~-~~~~~l~v~~ 97 (158)
|..|.. ...+.|.|..
T Consensus 86 n~~~~~~s~~~~l~V~~ 102 (218)
T 3k0w_A 86 NNFTFEFSQWSQLDVCD 102 (218)
T ss_dssp CTTCCEECCCEEEEEEC
T ss_pred cCCCCceeeEEEEEEEc
Confidence 998754 3345555543
No 116
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.44 E-value=3.5e-13 Score=92.02 Aligned_cols=88 Identities=17% Similarity=0.284 Sum_probs=64.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee------------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
|..++..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+. ...++.... +.|.|.+++
T Consensus 7 i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~---------~~L~i~~~~ 76 (209)
T 1nbq_A 7 VHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFD-QGDTTRLVCYNNKITASYEDRVTFLP---------TGITFKSVT 76 (209)
T ss_dssp EECSCSBCCEETTCCCEEECEEESCSSEEEEEEEE-ETTEEEESEETTEECTTTTTTCEEET---------TEEECSCCC
T ss_pred EEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEc-CCceeEEEEecCccCccccCceEeec---------cEEEEeeCC
Confidence 34566777789999999999999999999999998 43321 123333332 269999999
Q ss_pred CCCCeEEEEEEEcCCCc--eEEEEEEEEeccC
Q psy16261 70 KSDFGTYKCNAKNTLGG--SEGVIKVYNIGYF 99 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g~--~~~~~~l~v~~~~ 99 (158)
.+|+|.|+|.+.|..|. ....+.|.|...+
T Consensus 77 ~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p 108 (209)
T 1nbq_A 77 REDTGTYTCMVSEEGGNSYGEVKVKLIVLVPP 108 (209)
T ss_dssp TTSCSEEEEEEEETTSSCEECCEEECCEEBCC
T ss_pred HHHCcEEEEEEecCCCCccceEEEEEEEecCC
Confidence 99999999999998663 2345555555443
No 117
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.44 E-value=7.9e-13 Score=91.06 Aligned_cols=85 Identities=19% Similarity=0.366 Sum_probs=67.9
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++... .+ .|.|.+++.+|+|.|+|.|.|.
T Consensus 116 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~-~~--------~L~i~~v~~~d~G~Y~C~a~N~ 185 (212)
T 2yd1_A 116 GPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKN-QTKVDMSNPRYSLK-DG--------FLQIENSREEDQGKYECVAENS 185 (212)
T ss_dssp CCCCEEEETTCCEEECCEEECSSCCEEEEEET-TEECCTTSTTEEEE-TT--------EEEECSCCGGGCEEEEEEEEET
T ss_pred CCCceEeecCCeEEEEEEeccCCCCeEEEEEC-CeEcccCCCeEEcc-CC--------eEEEccCChhhCEEEEEEeecC
Confidence 34456678899999999999999999999999 777654 3444332 23 6999999999999999999999
Q ss_pred CCceEEE-EEEEEeccC
Q psy16261 84 LGGSEGV-IKVYNIGYF 99 (158)
Q Consensus 84 ~g~~~~~-~~l~v~~~~ 99 (158)
.|..... +.|.|....
T Consensus 186 ~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 186 MGTEHSKATNLYVKVRR 202 (212)
T ss_dssp TEEEECCCEEEEEEC--
T ss_pred CCceeEEEEEEEEEecc
Confidence 9988664 788887754
No 118
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.44 E-value=2e-13 Score=93.16 Aligned_cols=87 Identities=16% Similarity=0.147 Sum_probs=60.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|...+.. .+.+|+.+.|.|.+.+ +.+.+.|+|+ +..+....+... . ......|.|.+++.+|+|.|+|.+.
T Consensus 8 i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~--~----~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 3p2t_A 8 LWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKE-ESPAPWDRQNPL--E----PKNKARFSIPSMTEDYAGRYRCYYR 78 (196)
T ss_dssp EEEESCS-EEETTCCEEEEEECCT-TCCEEEEEET-TSCSCSEEECCC--S----SSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred EEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEEC-CCCCcccccccc--c----CCceEEEEeccCCcccCceEEEEEe
Confidence 3444555 5889999999999988 7789999999 654432111000 0 0012479999999999999999999
Q ss_pred cCCCc--eEEEEEEEEec
Q psy16261 82 NTLGG--SEGVIKVYNIG 97 (158)
Q Consensus 82 n~~g~--~~~~~~l~v~~ 97 (158)
|..|. .+..+.|.|..
T Consensus 79 n~~g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 79 SPVGWSQPSDPLELVMTG 96 (196)
T ss_dssp ETTEEBCCCCCEEEEEEC
T ss_pred CCCcccCCCccEEEEecC
Confidence 99872 24455565543
No 119
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.44 E-value=1.3e-12 Score=102.13 Aligned_cols=137 Identities=12% Similarity=0.108 Sum_probs=89.5
Q ss_pred cCceEEEecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeec-ccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 5 PSQLIGARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKF-SSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
++....+.+|+.+.|.|.+. +.|.|.+.|+++ +..+.....+....... ......+.|.|.+++.+|+|.|+|.|.|
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N 311 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELE-NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEECS-SSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETT
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEEC-CEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEe
Confidence 44566788999999999996 899999999999 76665543333222111 1122334699999999999999999999
Q ss_pred CCCceEEEEEEEEeccCC----C----------------------CCc---------cc----------chhhhhhhccc
Q psy16261 83 TLGGSEGVIKVYNIGYFG----S----------------------DTQ---------YV----------TDEEMQRTNQI 117 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~~----~----------------------~~~---------~~----------~~~~~~~~~~~ 117 (158)
. ....+.|.|...+. . |.. .+ ..+.+......
T Consensus 312 ~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~ 388 (527)
T 3qs9_E 312 H---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKH 388 (527)
T ss_dssp E---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTT
T ss_pred C---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcc
Confidence 7 45556665543320 0 000 00 01122333445
Q ss_pred ccccccCcccceEeeeccCCceEEEEccccCCCCC
Q psy16261 118 ARSKWGSERTNQIARSKWGSGYRYTSGPIRLPDPS 152 (158)
Q Consensus 118 ~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (158)
+.|.| .|.+.|..|....+..|.|..||
T Consensus 389 D~G~Y-------tC~A~N~~g~~~~~~~L~V~~~P 416 (527)
T 3qs9_E 389 QPGEY-------IFHAENDDAQFTKMFTLNIRRKP 416 (527)
T ss_dssp CCSCE-------EEEEEETTEEEEEEEEEC--CCC
T ss_pred cCEEE-------EEEEEeCCCcEEEEEEEEEecCC
Confidence 56666 99999999999999888876554
No 120
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.43 E-value=4.1e-12 Score=91.02 Aligned_cols=91 Identities=20% Similarity=0.285 Sum_probs=71.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+.+++..+.+.+|+.+.|.|.+.+.|. .+.|++.++..+....++.+...+ ..+.|.|.+++.+|+|.|+|.+.
T Consensus 7 v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y~C~~~ 80 (291)
T 2wim_A 7 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEG-----VRSRLTIYNANIEDAGIYRCQAT 80 (291)
T ss_dssp EEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEET-----TEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCC-----CEEEEEEccCCcccCEEEEEEEe
Confidence 456777888999999999999999874 899999437777666676665443 13479999999999999999999
Q ss_pred cCCCce-EEEEEEEEecc
Q psy16261 82 NTLGGS-EGVIKVYNIGY 98 (158)
Q Consensus 82 n~~g~~-~~~~~l~v~~~ 98 (158)
|..|.. ...+.|.+...
T Consensus 81 n~~g~~~~~~~~l~v~~~ 98 (291)
T 2wim_A 81 DAKGQTQEATVVLEIYQK 98 (291)
T ss_dssp CSSSCEEEEEEEEEEECC
T ss_pred cccCceEEEEEEEEecCC
Confidence 998876 44566666543
No 121
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.43 E-value=8.4e-13 Score=89.61 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=65.0
Q ss_pred eEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 8 LIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
...+.+|+.+.|.|.+.+.|.|.+.|+++ +..+....++.. .. +.|.|.++..+|.|.|+|.|.|..|..
T Consensus 122 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~-~~--------~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 191 (201)
T 3s97_C 122 DVYALMGQNVTLECFALGNPVPDIRWRKV-LEPMPSTAEIST-SG--------AVLKIFNIQLEDEGIYECEAENIRGKD 191 (201)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEET-TBCCCTTCEEET-TT--------TEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ceEEecCCcEEEEEEccCCCCCceEEEeC-CCcCCCceeecC-CC--------CEEEEccCChhhCEEEEEEEEecCCce
Confidence 55678999999999999999999999999 666554422211 11 269999999999999999999999999
Q ss_pred EEEEEEEEe
Q psy16261 88 EGVIKVYNI 96 (158)
Q Consensus 88 ~~~~~l~v~ 96 (158)
...+.|.|.
T Consensus 192 ~~~~~l~V~ 200 (201)
T 3s97_C 192 KHQARIYVQ 200 (201)
T ss_dssp EEEEEEEEE
T ss_pred eeeEEEEEe
Confidence 888888775
No 122
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.43 E-value=3.9e-12 Score=87.17 Aligned_cols=77 Identities=21% Similarity=0.252 Sum_probs=61.3
Q ss_pred EecCCCEEEEeEEeec-CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 11 ARLAAPLTLDCHVESY-PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
...++.+.|.|.+.+. |.+.+.|+++ +..+....++.+...+ ....|.|.+++.+|+|.|+|.+.|..|....
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~-g~~i~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~ 87 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTG-----EQIWLQINEPTPNDKGKYVMELFDGKTGHQK 87 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEET-TEECCCCSSEEEEEET-----TEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred EEcCceEEEEEEEeccCCCceEEEEEC-CEEccCCCeEEEEEeC-----CEEEEEECCCCcccCEEEEEEEecCCcceEE
Confidence 4467778888888885 5889999999 8888777777665544 1236999999999999999999998887666
Q ss_pred EEEE
Q psy16261 90 VIKV 93 (158)
Q Consensus 90 ~~~l 93 (158)
.+.|
T Consensus 88 ~~~l 91 (212)
T 2r15_A 88 TVDL 91 (212)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 123
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.2e-12 Score=80.31 Aligned_cols=81 Identities=20% Similarity=0.344 Sum_probs=63.8
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
..+.+.+|+.+.|.|.+. .|.+.+.|+|+ +..+....++.+...+ ..+.|.|.+++.+|+|.|+|.+.|
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~-g~~~~~~~~~~~~~~~-----~~~~L~I~~~~~~D~G~Y~C~a~~---- 87 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKD-GKKLSSSSKVRVEAVG-----CTRRLVVQQAGQAEAGEYSCEAGG---- 87 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEET-TEECCCCSSEEEEEET-----TEEEEEETTCCTTTCSCEEEEETT----
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEEC-CEECCCCCCEEEEEcC-----CEEEEEECCCCcccCEEEEEEcCC----
Confidence 345788999999999998 88899999999 8887776677665433 124799999999999999999954
Q ss_pred eEEEEEEEEecc
Q psy16261 87 SEGVIKVYNIGY 98 (158)
Q Consensus 87 ~~~~~~l~v~~~ 98 (158)
....+.|.|..+
T Consensus 88 ~~~~~~l~V~~p 99 (102)
T 2eo1_A 88 QQLSFRLQVAGQ 99 (102)
T ss_dssp EECCEEEEEESC
T ss_pred CcEEEEEEEeCC
Confidence 344566666654
No 124
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.43 E-value=8e-13 Score=100.87 Aligned_cols=91 Identities=21% Similarity=0.390 Sum_probs=70.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC---CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG---SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
|...+..+.+.+|+.+.|.|.+ +.|.|.+.|+++++..+... .++.....+ +|.|.+++.+|+|.|+|
T Consensus 344 i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~--------~L~I~~v~~~D~G~Y~C 414 (440)
T 3zyj_A 344 IVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDG--------TLNFTNVTVQDTGMYTC 414 (440)
T ss_dssp EEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTC--------CEEESSCCSTTCEEEEE
T ss_pred ccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCC--------eEEEccCChhhCEEEEE
Confidence 3455677789999999999999 67999999999746555433 355444444 69999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccCCC
Q psy16261 79 NAKNTLGGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 79 ~a~n~~g~~~~~~~l~v~~~~~~ 101 (158)
.|.|..|...+.+.+.|.+.+..
T Consensus 415 ~a~N~~G~~~~~~~~~v~~~~~~ 437 (440)
T 3zyj_A 415 MVSNSVGNTTASATLNVTGTHHH 437 (440)
T ss_dssp EEECSSCEEEEEEEEEEC-----
T ss_pred EEEcCCCcEEEEEEEEEeccccc
Confidence 99999999999999999887644
No 125
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.43 E-value=6e-13 Score=99.54 Aligned_cols=85 Identities=21% Similarity=0.359 Sum_probs=72.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++...... .|.|.++..+|+|.|+|.|.|..
T Consensus 318 ~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~--------~L~i~~v~~~d~G~Y~C~a~N~~ 388 (403)
T 3laf_A 318 HPSNLYAYESMDIEFECAVSGKPVPTVNWMKN-GDVVIPSDYFQIVGGS--------NLRILGVVKSDEGFYQCVAENEA 388 (403)
T ss_dssp CCCCEECCTTCCEEECCEEEEESCCEEEEEET-TEECCCSSSEEEETTT--------EEEESSCCGGGCEEEEEEEEETT
T ss_pred cCcceEEecCCeEEEEEEEeeccCCEEEEEEC-CEECCCCCcEEEecCc--------cEEEeccccccCEEEEEEEEcCC
Confidence 34455677899999999999999999999999 8777666666655444 79999999999999999999999
Q ss_pred CceEEEEEEEEecc
Q psy16261 85 GGSEGVIKVYNIGY 98 (158)
Q Consensus 85 g~~~~~~~l~v~~~ 98 (158)
|.....+.|.|..+
T Consensus 389 G~~~~~~~l~V~~P 402 (403)
T 3laf_A 389 GNAQSSAQLIVPKP 402 (403)
T ss_dssp EEEEEEEEEECCCC
T ss_pred ceEEEEEEEEEeCC
Confidence 99999999888654
No 126
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.42 E-value=1.8e-12 Score=94.31 Aligned_cols=79 Identities=22% Similarity=0.187 Sum_probs=64.7
Q ss_pred EEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 10 GARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
.+..|+.+.|.|.+.|.|.| .+.|+++ +..+.... ..... .|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 228 ~~~~g~~v~l~C~~~g~P~p~~v~W~~~-~~~l~~~~---~~~~~--------~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 295 (313)
T 4fqp_A 228 WYLGQNEATLTCDARSNPEPTGYNWSTT-MGPLPPFA---VAQGA--------QLLIRPVDKPINTTLICNVTNALGARQ 295 (313)
T ss_dssp EETTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTTE---EEETT--------EEEECCCSSCCEEEEEEEEECSSCEEE
T ss_pred eecCCCeEEEEEEecCCCCCcEEEEEEC-CEECCCce---EEeCC--------EEEECcCChhhCEEEEEEEEeCCCcEE
Confidence 35568899999999999999 6999999 66654331 12222 699999999999999999999999999
Q ss_pred EEEEEEEeccCC
Q psy16261 89 GVIKVYNIGYFG 100 (158)
Q Consensus 89 ~~~~l~v~~~~~ 100 (158)
..+.|.|.+.|+
T Consensus 296 ~~~~l~V~~~PP 307 (313)
T 4fqp_A 296 AELTVQVKEGPP 307 (313)
T ss_dssp EEEEEEEECCC-
T ss_pred EEEEEEEEeCCC
Confidence 999999987654
No 127
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.42 E-value=1.7e-12 Score=96.65 Aligned_cols=81 Identities=21% Similarity=0.340 Sum_probs=70.1
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.. . .|.|.++..+|+|.|+|.|.|..|
T Consensus 301 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~-~--------~L~i~~v~~~d~G~Y~C~a~N~~G 370 (382)
T 1cs6_A 301 ITDTEADIGSDLRWSCVASGKPRPAVRWLRD-GQPLASQNRIEVSG-G--------ELRFSKLVLEDSGMYQCVAENKHG 370 (382)
T ss_dssp CCCEEEETTCCEEEECEEEEESCCEEEEEET-TEECCCCSSEEEET-T--------EEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCccEEcCCCeEEEEEEeeeecCCEEEEEEC-CEECCCCceEEEEC-C--------EEEECcCCcccCEEEEEEEEeCCC
Confidence 3455688999999999999999999999999 88877776665532 2 699999999999999999999999
Q ss_pred ceEEEEEEEEe
Q psy16261 86 GSEGVIKVYNI 96 (158)
Q Consensus 86 ~~~~~~~l~v~ 96 (158)
.....+.|.|.
T Consensus 371 ~~~~~~~l~V~ 381 (382)
T 1cs6_A 371 TVYASAELTVQ 381 (382)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEEEEe
Confidence 99998888875
No 128
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.42 E-value=4.2e-13 Score=97.18 Aligned_cols=75 Identities=24% Similarity=0.322 Sum_probs=59.8
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC---CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG---SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+... .++.....+ .|.|.+++..|+|.|+|.|.
T Consensus 114 ~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y~C~a~ 184 (304)
T 2yd9_A 114 GPQLKVVERTRTATMLCAASGNPDPEITWFKD-FLPVDPSASNGRIKQLRSG--------ALQIESSEETDQGKYECVAT 184 (304)
T ss_dssp CCCCEEEETTSCEEECCEEECSSCCEEEEEET-TEECCGGGGTTSEEECTTS--------CEEECSCCGGGCEEEEEEEE
T ss_pred CCccEEEeCCCeEEEEEECccCCCCeEEEEEC-CEECcCCCCcceEEeCCCe--------EEEEccCCcccCEEEEEEEE
Confidence 34556688899999999999999999999999 7766543 233322222 69999999999999999999
Q ss_pred cCCCceE
Q psy16261 82 NTLGGSE 88 (158)
Q Consensus 82 n~~g~~~ 88 (158)
|..|...
T Consensus 185 n~~g~~~ 191 (304)
T 2yd9_A 185 NSAGVRY 191 (304)
T ss_dssp ETTEEEE
T ss_pred eCCCCEE
Confidence 9988764
No 129
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.42 E-value=1e-12 Score=94.16 Aligned_cols=84 Identities=15% Similarity=0.101 Sum_probs=65.2
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCe-eEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE-c
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPI-TFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK-N 82 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~-n 82 (158)
.+....+.+|+.+.|.|.+.+.+.+. +.|++.++..+....++...... .|.|.+++.+|.|.|+|.+. +
T Consensus 95 ~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~--------~L~i~~v~~~d~G~Y~C~a~~~ 166 (289)
T 3ejj_X 95 LAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR--------GFIIRKAKVLDSNTYVCKTMVN 166 (289)
T ss_dssp SCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTT--------EEEESSCCGGGCEEEEEEEEET
T ss_pred ccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCC--------CEEEeecccccCEEEEEEEEeC
Confidence 34566788999999999999987775 99986437777666777665555 69999999999999999999 5
Q ss_pred CCCceEEEEEEEEe
Q psy16261 83 TLGGSEGVIKVYNI 96 (158)
Q Consensus 83 ~~g~~~~~~~l~v~ 96 (158)
..+.....+.|.|.
T Consensus 167 ~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 167 GRESTSTGIWLKVN 180 (289)
T ss_dssp TEEEECCCEEEEEE
T ss_pred CCccccccEEEEEE
Confidence 44444555666665
No 130
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.42 E-value=6.1e-13 Score=99.10 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=86.9
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCee------eecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSL------IHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
..+.+|+.+.|.|.+.|.|.|.+.|+++ +.. +....++... . +.|.|.+++.+|+|.|+|.|.|
T Consensus 222 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~-~--------~~L~i~~v~~~d~G~Y~C~a~n 291 (388)
T 2v5m_A 222 LELMVAHTISLLCPAQGFPAPSFRWYKF-IEGTTRKQAVVLNDRVKQV-S--------GTLIIKDAVVEDSGKYLCVVNN 291 (388)
T ss_dssp EEEETTSCEEECCCCEEESCCEEEEEEE-CTTSSCEEECCCSSSEEEE-T--------TEEEESSCCGGGCEEEEEEEEC
T ss_pred eEEeeCCcEEEEEECCCCCCCEEEEEec-CCCCcccccccccCceecc-c--------CEEEECcCCHHHCeEEEEEEec
Confidence 4578899999999999999999999997 322 1122333221 2 2699999999999999999999
Q ss_pred CCCceEEEEEEEEeccCCC------------------------CCc---------c----cchhhhhhhcccccccccCc
Q psy16261 83 TLGGSEGVIKVYNIGYFGS------------------------DTQ---------Y----VTDEEMQRTNQIARSKWGSE 125 (158)
Q Consensus 83 ~~g~~~~~~~l~v~~~~~~------------------------~~~---------~----~~~~~~~~~~~~~~~~~g~~ 125 (158)
..|.....+.|.|...+.. +.. . ...+.+......+.|.|
T Consensus 292 ~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y--- 368 (388)
T 2v5m_A 292 SVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMY--- 368 (388)
T ss_dssp SSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEE---
T ss_pred CCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCCCEEEEecCChhhCEEE---
Confidence 9998877777776553210 000 0 01122333445566677
Q ss_pred ccceEeeeccCCceEEEEccccC
Q psy16261 126 RTNQIARSKWGSGYRYTSGPIRL 148 (158)
Q Consensus 126 ~~~~~~~~~~~~g~~~~~~~~~~ 148 (158)
.|.+.|..|....++.|.|
T Consensus 369 ----~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 369 ----QCFVRNDRESAEASAELKL 387 (388)
T ss_dssp ----EEEEECSSCEEEEEEEEEE
T ss_pred ----EEEEEcCCCcEEEEEEEEe
Confidence 9999999999988887764
No 131
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.42 E-value=1.3e-12 Score=89.49 Aligned_cols=93 Identities=27% Similarity=0.411 Sum_probs=62.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC---e-EEEEEeecccceEEEEEEEcCCCCCCCeEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS---R-YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYK 77 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 77 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.... + ....... .......|.|.+++..|+|.|+
T Consensus 12 i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~ 88 (212)
T 2v9r_A 12 IVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPS--GSLFFLRIVHGRKSRPDEGVYV 88 (212)
T ss_dssp EEECCCCEEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCTTCSEEECTT--SCEEESSCCCCSSCCCSCEEEE
T ss_pred eecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEEC-CEEeeccccccccceEEecC--CcEEEEEEEecCCCcccCeEEE
Confidence 34556677889999999999999999999999999 76654321 0 1111111 1111123556677999999999
Q ss_pred EEEEcCCCce-EEEEEEEEec
Q psy16261 78 CNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 78 C~a~n~~g~~-~~~~~l~v~~ 97 (158)
|.+.|..|.. ...+.|.|..
T Consensus 89 C~~~n~~g~~~~~~~~l~V~~ 109 (212)
T 2v9r_A 89 CVARNYLGEAVSHDASLEVAI 109 (212)
T ss_dssp EEEEETTEEEECCCEEEEECE
T ss_pred EEEECCCCceeecceEEEEEe
Confidence 9999988765 3345555443
No 132
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.41 E-value=7.9e-12 Score=96.87 Aligned_cols=91 Identities=20% Similarity=0.284 Sum_probs=66.8
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCe-eEEEcCCCee--eecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPI-TFWTHENGSL--IHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
.+....+.+|+.+.|.|.+.+.|.|. +.|+++ +.. +....+.... ........+.|.|.++..+|+|.|+|.|.
T Consensus 217 ~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 293 (524)
T 2ec8_A 217 SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRE-NSQTKLQEKYNSWHH--GDFNYERQATLTISSARVNDSGVFMCYAN 293 (524)
T ss_dssp SCSEEEEETTSCEEEEEEEEESSTTCEEEEEET-TCSCCCCEEEEEEEC--SSSCEEEEEEEEESSCCTTTCEEEEEEEE
T ss_pred cCCcceEEcCCcEEEEEEEecCCCcEEEEEEeC-CCCCccccccccccc--cCCccceEEEEEECCCCHHHCEEEEEEEE
Confidence 44555788999999999999999887 999999 555 2222222111 00012234589999999999999999999
Q ss_pred cCCCceEEEEEEEEecc
Q psy16261 82 NTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~ 98 (158)
|..|.....+.|.|...
T Consensus 294 n~~g~~~~~~~l~V~~~ 310 (524)
T 2ec8_A 294 NTFGSANVTTTLEVVDK 310 (524)
T ss_dssp CSSCEEEEEEEEEEESS
T ss_pred ecCCceEEEEEEEEecc
Confidence 99998887877777543
No 133
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.41 E-value=3e-12 Score=95.37 Aligned_cols=90 Identities=21% Similarity=0.352 Sum_probs=70.9
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.... ++.+.... ..+.|.|.++...|+|.|+|.|.|..
T Consensus 108 ~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~-g~~l~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~N~~ 181 (389)
T 2jll_A 108 TIYYSWEGNPINISCDVKSNPPASIHWRRD-KLVLPAKNTTNLKTYSTG-----RKMILEIAPTSDNDFGRYNCTATNHI 181 (389)
T ss_dssp CEEEECTTCCEEEEECEEEESCCEEEEEET-TEESSCTTCTTEEEEECS-----SCEEEEECCCSTTSSEEEEEEEEETT
T ss_pred ceEEeccCCEEEEEEEEEecCCCeEEEEEC-CccCCcccCceEEEeccC-----CEEEEEECCCChhhCEEEEEEEEcCC
Confidence 334678899999999999999999999999 77776543 55444332 12379999999999999999999999
Q ss_pred CceEEEEEEEEeccCCCC
Q psy16261 85 GGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 85 g~~~~~~~l~v~~~~~~~ 102 (158)
|.....+.|.+...+..+
T Consensus 182 G~~~~~~~l~v~~~P~~P 199 (389)
T 2jll_A 182 GTRFQEYILALADVPSSP 199 (389)
T ss_dssp EEEEEEEEEEECCCCCCC
T ss_pred CcEEEEEEEEecCCCCCC
Confidence 998888777776655443
No 134
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.41 E-value=2.1e-12 Score=90.25 Aligned_cols=101 Identities=23% Similarity=0.300 Sum_probs=67.3
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEc----CCCeeeecCCeE--EEEEe-ecccceEEEEEEEcCCCCCCCeEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTH----ENGSLIHEGSRY--HMWTE-KFSSYKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~----~~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
+....+.+|+.+.|.|.+.+.|.|.+.|++ + +..+...... ..... ........+.|.|.++..+|.|.|+|
T Consensus 121 ~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 199 (241)
T 3grw_A 121 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVN-GSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLC 199 (241)
T ss_dssp TCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSS-SCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEE
T ss_pred CccceecCCCEEEEEEEEecCCCCEEEEEEcccCC-CcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEE
Confidence 344557789999999999999999999999 6 6555443221 11111 11122234579999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccCCCCCcccc
Q psy16261 79 NAKNTLGGSEGVIKVYNIGYFGSDTQYVT 107 (158)
Q Consensus 79 ~a~n~~g~~~~~~~l~v~~~~~~~~~~~~ 107 (158)
.|.|..|.....+.|.|...+..+...+.
T Consensus 200 ~a~N~~g~~~~~~~l~V~~~p~~~~~~ve 228 (241)
T 3grw_A 200 RATNFIGVAEKAFWLSVHGPRAAEEELVE 228 (241)
T ss_dssp EEECSSCEEEEEEEEEC------------
T ss_pred EEecCcceEEEEEEEEecCCCCCCcccee
Confidence 99999999999999999887766555443
No 135
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.41 E-value=2.7e-12 Score=88.44 Aligned_cols=87 Identities=23% Similarity=0.304 Sum_probs=65.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC---CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG---SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+... .++...... ..+.|.|.++..+|.|.|+|.|.
T Consensus 114 ~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~-g~~l~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~ 187 (212)
T 2yd6_A 114 GPQLKVVERTRTATMLCAASGNPDPEITWFKD-FLPVDTSNNNGRIKQLRSE-----SIGALQIEQSEESDQGKYECVAT 187 (212)
T ss_dssp CCCCEEEETTSCEEEEEEEECSSCCEEEEEET-TEEC------CCEEEEEET-----TEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcceeEecCCCEEEEEEecCCCCCeEEEEEC-CccccCcCCCceEEEEecC-----CeEEEEEcCCCcccCEEEEEEEE
Confidence 34455678899999999999999999999999 7766543 344443322 12479999999999999999999
Q ss_pred cCCCceEE-EEEEEEec
Q psy16261 82 NTLGGSEG-VIKVYNIG 97 (158)
Q Consensus 82 n~~g~~~~-~~~l~v~~ 97 (158)
|..|.... .+.|.+..
T Consensus 188 N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 188 NSAGTRYSAPANLYVRG 204 (212)
T ss_dssp ETTEEEECCCEEEEEEC
T ss_pred CCCCccccccccEEEEe
Confidence 99998744 45555544
No 136
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=5.8e-14 Score=103.97 Aligned_cols=133 Identities=11% Similarity=0.041 Sum_probs=90.4
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee-cCCeEEEEEeecccceEEEEEEEcCCCCCCCe-EEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH-EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG-TYKCNAK 81 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~Y~C~a~ 81 (158)
..+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+. ...+.. ....+.|.|.+++..|+| .|+|.|.
T Consensus 163 ~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~--------~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 163 VQVPNASVDVGDDVLLRCQVEGRGLEQAGWILT-ELEQSATVMKSG--------GLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp EECCSSCCBTTCCEEEEEEEECSSCCCCCEEES-CCCSSEEECCCC--------CSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred ccCCceEEeCCCcEEEEEEEecCCCCEEEEEcC-Cceeecccccce--------ecccceEEEeeCChHHCCCeEEEEEE
Confidence 344555678999999999999999999999999 43322 111111 112347999999999999 9999999
Q ss_pred cCCCceEEEEEEEEeccCCC--------------------CCc---------ccc---------------------hhhh
Q psy16261 82 NTLGGSEGVIKVYNIGYFGS--------------------DTQ---------YVT---------------------DEEM 111 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~~--------------------~~~---------~~~---------------------~~~~ 111 (158)
|..|.....+.|.|...+.. |.. .+. .+.+
T Consensus 234 n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I 313 (347)
T 2ifg_A 234 NDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRL 313 (347)
T ss_dssp ETTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEE
T ss_pred cCCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEE
Confidence 99887665554443322210 000 000 0233
Q ss_pred hhhcccccccccCcccceEeeeccCCceEEEEccccCCCCC
Q psy16261 112 QRTNQIARSKWGSERTNQIARSKWGSGYRYTSGPIRLPDPS 152 (158)
Q Consensus 112 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (158)
......+.|.| .|.|.|..|....+..+.|.+||
T Consensus 314 ~~v~~~d~G~Y-------~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 314 NQPTHVNNGNY-------TLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp SSCCGGGCEEE-------EEEEEETTEEEEEEEEECSCCCC
T ss_pred CCCCcccCceE-------EEEEecCCCceeeEEEEEecCCC
Confidence 33345566666 99999999999999999987765
No 137
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.40 E-value=5.9e-13 Score=102.36 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=66.2
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee---cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH---EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
+..+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+. ...++.+...+ +|.|.+++.+|+|.|+|.|.|
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~-~~~~~~~~~~~~~~~~~~~--------~L~i~~v~~~d~G~Y~C~a~N 462 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSP-RKHLVSAKSNGRLTVFPDG--------TLEVRYAQVQDNGTYLCIAAN 462 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECT-TSCBC-------CEECTTS--------CEEESSCCSTTCEEEEEEEEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEEC-CccccccCCCceEEeCCCC--------EEEEeeCChHHCEEEEEEEEe
Confidence 4667789999999999999999999999999 55443 22344443333 699999999999999999999
Q ss_pred CCCceEEEEEEEEe
Q psy16261 83 TLGGSEGVIKVYNI 96 (158)
Q Consensus 83 ~~g~~~~~~~l~v~ 96 (158)
..|..+..+.|.|.
T Consensus 463 ~~g~~~~~~~l~V~ 476 (477)
T 2id5_A 463 AGGNDSMPAHLHVR 476 (477)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEe
Confidence 99999888888775
No 138
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.40 E-value=4.2e-13 Score=90.48 Aligned_cols=134 Identities=11% Similarity=0.098 Sum_probs=84.9
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCee-eec-------------CCeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSL-IHE-------------GSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +.. +.. ..++...... ......+|.|.+++.+|
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~~L~i~~v~~~D 79 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNS-NQIKILGNQGSFLTKGPSKLNDRADSRRSL--WDQGNFPLIIKNLKIED 79 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEET-TCCEEEEEETTEEEECSCTTGGGEECCGGG--GGGTBCCEEECSCCGGG
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeC-CccceEEecCceEecCChhhCCcccccccc--ccCCeEEEEEecCCHHH
Confidence 356789999999999999999999999999 432 211 1122222100 00002259999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEecc--CCC------------------CCc-------------ccchhhhhhhccccc
Q psy16261 73 FGTYKCNAKNTLGGSEGVIKVYNIGY--FGS------------------DTQ-------------YVTDEEMQRTNQIAR 119 (158)
Q Consensus 73 ~G~Y~C~a~n~~g~~~~~~~l~v~~~--~~~------------------~~~-------------~~~~~~~~~~~~~~~ 119 (158)
+|.|+|.+.|..+.. .|.|... +.. +.. ....+.+......+.
T Consensus 80 ~G~Y~C~~~~~~~~~----~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~ 155 (184)
T 2ny1_B 80 SDTYICEVEDQKEEV----QLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDS 155 (184)
T ss_dssp CEEEEEEETTEEEEE----EEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEEESSEEEESSCCGGGC
T ss_pred CEEEEEEEEcCCCcE----EEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccccCceEEEEecCCcCCC
Confidence 999999999875533 2222211 100 100 001133334455667
Q ss_pred ccccCcccceEeeeccCCceEEEEccccCCCCCCC
Q psy16261 120 SKWGSERTNQIARSKWGSGYRYTSGPIRLPDPSGD 154 (158)
Q Consensus 120 ~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (158)
|.| .|.+.|..+....+..+.|-..|..
T Consensus 156 G~Y-------~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 156 GTW-------TCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp EEE-------EEEEEETTEEEEEEEEEEEECCCC-
T ss_pred eEE-------EEEEEECCceEEEEEEEEEEecCCC
Confidence 777 9999999999989888887666554
No 139
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=87.26 Aligned_cols=80 Identities=26% Similarity=0.460 Sum_probs=66.8
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++...... +.|.|.++..+|+|.|+|.|.|..|...
T Consensus 108 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 179 (189)
T 2v5t_A 108 ATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGSN-------TELTVRNIINSDGGPYVCRATNKAGEDE 179 (189)
T ss_dssp EETTSCCCEEEECEEEEESCCEEEEEET-TEECCCSSSEEEETTT-------TEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred ccccCCCcEEEEEEEccCCCCeEEEEEC-CEECcCCCcEEEecCC-------CEEEEcCCChhhCeeEEEEEEeCCCcee
Confidence 3455799999999999999999999999 8877766666544322 2699999999999999999999999998
Q ss_pred EEEEEEEe
Q psy16261 89 GVIKVYNI 96 (158)
Q Consensus 89 ~~~~l~v~ 96 (158)
..+.|.|.
T Consensus 180 ~~~~l~V~ 187 (189)
T 2v5t_A 180 KQAFLQVF 187 (189)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 88887765
No 140
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.40 E-value=3.4e-13 Score=93.19 Aligned_cols=80 Identities=23% Similarity=0.198 Sum_probs=55.2
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee---cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH---EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++++.... ...++.+...+ . ...+.|.+++.+|+|.|+|.|.|
T Consensus 113 ~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g--~---l~il~i~~v~~~D~G~YtC~A~N 187 (203)
T 4fa8_A 113 SERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDG--S---LSVAVDLSLPKPWHLPVTCVGKN 187 (203)
T ss_dssp EEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTS--C---EEEEEEEEECSSCCCCEEEEEES
T ss_pred ceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCC--C---EEEEEECCCCHHHCEEEEEEEEc
Confidence 3344466899999999999999999999987444332 22344443332 1 12466789999999999999999
Q ss_pred CCCceEEE
Q psy16261 83 TLGGSEGV 90 (158)
Q Consensus 83 ~~g~~~~~ 90 (158)
..|.....
T Consensus 188 ~~G~a~~v 195 (203)
T 4fa8_A 188 DKEEAHGV 195 (203)
T ss_dssp SSCEEEEE
T ss_pred CCCEEEEE
Confidence 99987653
No 141
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.39 E-value=5.1e-12 Score=87.25 Aligned_cols=93 Identities=19% Similarity=0.302 Sum_probs=64.7
Q ss_pred eecCceEEEecCCCEEEEeEEeecCC-----CeeEEEcCCCeeeec---------------CCeEEEEEeecccceEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPK-----PITFWTHENGSLIHE---------------GSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~-----p~i~W~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 62 (158)
..+++.+.+.+|+.+.|.|.+.+.|. +.+.|+++ +..+.. ..|..+.... .....++
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~-~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~--~~~~~~~ 81 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEME-DKNIIQFVHGEEDLKVQHSSYRQRARLLKDQ--LSLGNAA 81 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEET-TEEEEEEETTEECSSSSCGGGSSSEEECHHH--HTTTEEE
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEEC-CcEEEEEeCCccccccccccccCceEEcccc--ccCCEEE
Confidence 45677788999999999999988774 38999997 432210 1233222110 0011347
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEeccC
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
|.|.+++.+|+|.|+|.+.| .|.....+.|.|...+
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~ 117 (222)
T 3sbw_C 82 LQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPY 117 (222)
T ss_dssp EEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCC
T ss_pred EEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCC
Confidence 99999999999999999999 5666677777776544
No 142
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.39 E-value=6.8e-12 Score=86.66 Aligned_cols=93 Identities=20% Similarity=0.171 Sum_probs=64.8
Q ss_pred CceEEEecCCCEEEEeEEeecCC--CeeEEEcCCCeeeecCCe-EEEEEeec--ccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPK--PITFWTHENGSLIHEGSR-YHMWTEKF--SSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
+..+.+.+|+.+.|.|.+.|.|. +.+.|+++ +..+..... ........ ..+...+.|.|.+++.+|+|.|+|.|
T Consensus 112 ~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 190 (213)
T 2x1w_L 112 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAA 190 (213)
T ss_dssp CSCEEEETTCCEEEEEEEEECTTBCCEEEEECS-CSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEcCCCCEEEEEEEECCCCCceEEEEEec-CCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEE
Confidence 34447889999999999999654 47999999 554321111 00000000 00223457999999999999999999
Q ss_pred EcCCCceEEEEEEEEeccC
Q psy16261 81 KNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~~~ 99 (158)
.|..|.....+.|.|...+
T Consensus 191 ~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 191 SSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp ECSSCEEEEEEEEEEEC--
T ss_pred ecCCCcEEEEEEEEEeccc
Confidence 9999999999999887654
No 143
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.39 E-value=2.1e-12 Score=92.62 Aligned_cols=132 Identities=16% Similarity=0.182 Sum_probs=84.8
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec--CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE--GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
+....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++...... .|.|.++...|.|.|+|.+.|.
T Consensus 105 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~--------~L~i~~v~~~d~G~Y~C~~~n~ 175 (291)
T 2wim_A 105 VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANN--------NLQILNINKSDEGIYRCEGRVE 175 (291)
T ss_dssp CCSEEEETTSCEEECCCCBCSSCCEEEEECC-----CBCCCSSEEECTTS--------CEEETTCCGGGCEEEEEEEEET
T ss_pred CCChhhcCCCCEEEEEEEccCCCCEEEEEEC-CccccccCCceEEEccCC--------CEEEEecchhhCEEEEEEEEEC
Confidence 3445688999999999999999999999999 655543 3455444333 6999999999999999999998
Q ss_pred CCceE--EEEEEEEeccCCCCCc-----------------------ccc------------------------hhhhhhh
Q psy16261 84 LGGSE--GVIKVYNIGYFGSDTQ-----------------------YVT------------------------DEEMQRT 114 (158)
Q Consensus 84 ~g~~~--~~~~l~v~~~~~~~~~-----------------------~~~------------------------~~~~~~~ 114 (158)
.+... ..+.+.+...+..... +.. .+.+...
T Consensus 176 ~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~ 255 (291)
T 2wim_A 176 ARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNI 255 (291)
T ss_dssp TTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESC
T ss_pred CCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeC
Confidence 76542 3455555443311000 000 0111112
Q ss_pred cccccccccCcccceEeeeccCCceEEEEccccCCCCCC
Q psy16261 115 NQIARSKWGSERTNQIARSKWGSGYRYTSGPIRLPDPSG 153 (158)
Q Consensus 115 ~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (158)
...+.|.| .|++.|..|....++.+.+-+|+.
T Consensus 256 ~~~d~G~Y-------~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 256 INSDGGPY-------VCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp CSTTCEEE-------EEEEEETTEEEEEEEEEEC-----
T ss_pred CcccCEEE-------EEEEEECCCceeeeEEEEEEEecc
Confidence 23344444 999999999999999999766654
No 144
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.39 E-value=2.5e-12 Score=87.94 Aligned_cols=88 Identities=10% Similarity=0.123 Sum_probs=63.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec-------------------CCeEEEEEeecccceEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE-------------------GSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~ 62 (158)
+++.+....+.+|+.+.|.|...+.+.+.+.|+++ ...... ..++.+.... +
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~--------~ 72 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKG-NTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG--------S 72 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCSEEEEEES-SCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS--------C
T ss_pred ccccCccceeecCCcEEEEEeCCCCCceEEEeccC-CCCCccceEEEEecCCCccccCccccceeEEecCC--------e
Confidence 34555566789999999999998889999999987 321111 1233222222 6
Q ss_pred EEEcCCCCCCCeEEEEEEEcCC-CceEEEEEEEEecc
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTL-GGSEGVIKVYNIGY 98 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~ 98 (158)
|.|.+++.+|+|.|+|.+.|.. +.....+.|.|...
T Consensus 73 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 109 (208)
T 3r4d_A 73 LLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQP 109 (208)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECC
T ss_pred EEEccccccCCeEEEEEEEcccCceeEEEEEEEeccC
Confidence 9999999999999999999985 44566667776554
No 145
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.39 E-value=7.9e-13 Score=91.12 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=63.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCN 79 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 79 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.... ........ ......|.|.+++..|+|.|+|.
T Consensus 12 i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~---~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 12 IIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKD-GEPVSTNEKKSHRVQFKD---GALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp EEECCCCEEECTTSCEEECCEEECSSCCEEEEEET-TEECCCSSSSSSEEECTT---SCEEESSCCBSSSCBCCEEEEEE
T ss_pred EecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEEC-CcCccCCCccceeEEecC---CceEEEEEeccCCcccCceEEEE
Confidence 34556677899999999999999999999999999 77665431 11221111 11112347889999999999999
Q ss_pred EEcCCCceE-EEEEEEEe
Q psy16261 80 AKNTLGGSE-GVIKVYNI 96 (158)
Q Consensus 80 a~n~~g~~~-~~~~l~v~ 96 (158)
+.|..|... ....|.|.
T Consensus 88 ~~n~~g~~~~~~~~l~v~ 105 (217)
T 2vr9_A 88 AKNRVGQAVSRHASLQIA 105 (217)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EecCCCccccccceEEEE
Confidence 999888652 23444443
No 146
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.39 E-value=1.3e-12 Score=97.45 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=64.2
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.... ++...... .. +.|.|.++..+|+|.|+|.|.|..
T Consensus 220 ~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~-g~~~~~~~~~~~~~~~~~-~~----~~L~i~~~~~~d~G~Y~C~a~n~~ 293 (395)
T 1bih_A 220 KDMMAKAGDVTMIYCMYGSNPMGYPNYFKN-GKDVNGNPEDRITRHNRT-SG----KRLLFKTTLPEDEGVYTCEVDNGV 293 (395)
T ss_dssp CSEEEETTSCEEEEEEEECSSCCCCEEEET-TEECCCCTTSSEESCSSS-TT----SEEEESSCCGGGCEEEEEEECCSS
T ss_pred CceEEECCCcEEEEEEeccCCCCeEEEEEC-CEEcCCCCceeEEEEecC-CC----ceEEEccCChhhCEEEEEEEEeCC
Confidence 446688999999999999999999999999 77665432 22211111 11 159999999999999999999999
Q ss_pred CceEE-EEEEEEec
Q psy16261 85 GGSEG-VIKVYNIG 97 (158)
Q Consensus 85 g~~~~-~~~l~v~~ 97 (158)
|.... .+.|.|..
T Consensus 294 g~~~~~~~~l~V~~ 307 (395)
T 1bih_A 294 GKPQKHSLKLTVVS 307 (395)
T ss_dssp SSCEEEEEEEEEEE
T ss_pred CCceEEEEEEEEEc
Confidence 98654 66666554
No 147
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.38 E-value=4.4e-12 Score=100.01 Aligned_cols=85 Identities=18% Similarity=0.284 Sum_probs=75.0
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.|.|.|.++|+++ +..+..+.++.+...+ + ..+|.|.++.+.|+|.|+|.|.|..
T Consensus 488 ~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~-~~el~~s~~~~i~~~~-~----~~~L~I~~~~~~D~G~Yt~~A~N~~ 561 (573)
T 3uto_A 488 KPYGTEVGEGQSANFYCRVIASSPPVVTWHKD-DRELKQSVKYMKRYNG-N----DYGLTINRVKGDDKGEYTVRAKNSY 561 (573)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSCCEEEEEET-TEECCSSSSEEEEEET-T----EEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCCcEEeCCCcEEEEEEEEccCCCeEEEEEC-CEEcccCCcEEEEEcC-C----EEEEEEcCCCcccCcEEEEEEEeCC
Confidence 34556788999999999999999999999999 8888888888887655 2 3479999999999999999999999
Q ss_pred CceEEEEEEEE
Q psy16261 85 GGSEGVIKVYN 95 (158)
Q Consensus 85 g~~~~~~~l~v 95 (158)
|..++.+.|.|
T Consensus 562 G~~~~~v~l~V 572 (573)
T 3uto_A 562 GTKEEIVFLNV 572 (573)
T ss_dssp EEEEEEEEEEE
T ss_pred CcEEEEEEEEE
Confidence 99999998877
No 148
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.38 E-value=9.4e-12 Score=89.16 Aligned_cols=92 Identities=18% Similarity=0.166 Sum_probs=69.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCCCeeeec-CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-KPITFWTHENGSLIHE-GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCN 79 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 79 (158)
+.+.|....+.+|+.+.|.|.+.+.| .+.+.|++.++..+.. ..++.+..... ..+.|.|.+++.+|+|.|+|.
T Consensus 5 v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~ 80 (291)
T 1qz1_A 5 VDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD----DSSTLTIYNANIDDAGIYKCV 80 (291)
T ss_dssp EEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEET----TEEEEEECSCCGGGCEEEEEE
T ss_pred eEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCC----CeEEEEEecCCCCCCEEEEEE
Confidence 45677788899999999999999987 6899999932766653 35555543221 124799999999999999999
Q ss_pred EEcCCCce-EEEEEEEEec
Q psy16261 80 AKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 80 a~n~~g~~-~~~~~l~v~~ 97 (158)
+.|..|.. ...+.|.|..
T Consensus 81 ~~n~~g~~~~~~~~l~v~~ 99 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIFQ 99 (291)
T ss_dssp EECTTSCEEEEEEEEEEEC
T ss_pred EEcCCCCeeEEEEEEEeec
Confidence 99998653 4566666543
No 149
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.38 E-value=4.5e-12 Score=87.21 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=64.3
Q ss_pred eecCce-EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 3 VIPSQL-IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 3 ~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
.+.+.. +.+.+|+.+.|.|.+.|.|.|.+.|++..+..+ ..+.... + ..+.|.|.+++.+|+|.|.|.|.
T Consensus 4 ~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~~--~-----~~~~L~I~~v~~~D~G~Y~C~a~ 74 (202)
T 1vca_A 4 ETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTNE--G-----TTSTLTMNPVSFGNEHSYLCTAT 74 (202)
T ss_dssp EEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEEE--T-----TEEEEEESSCCGGGCSEEEEEEE
T ss_pred EECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEEc--C-----CccEEEECcCCHHHCEEEEEEEE
Confidence 344444 445599999999999999999999998522221 1222111 1 01369999999999999999999
Q ss_pred cCCCceEEEEEEEEeccC
Q psy16261 82 NTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~ 99 (158)
|..|..+..+.|.|...+
T Consensus 75 n~~~~~~~~~~l~V~~~p 92 (202)
T 1vca_A 75 CESRKLEKGIQVEIYSFP 92 (202)
T ss_dssp ETTEEEEEEEEEEEEBCC
T ss_pred ECCceEeeEEEEEEEeCC
Confidence 998888878888887654
No 150
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.38 E-value=1.9e-12 Score=88.58 Aligned_cols=84 Identities=24% Similarity=0.453 Sum_probs=66.7
Q ss_pred CceEEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
+....+.+|+.+.|.|.+ .+.|.|.+.|+++ +..+... .++.. ... .|.|.++..+|.|.|+|.|.|.
T Consensus 118 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~-~~~l~~~~~~~~~-~~~--------~L~i~~~~~~d~G~Y~C~a~N~ 187 (212)
T 2v9r_A 118 PSDVMVAVGEPAVMECQPPRGHPEPTISWKKD-GSPLDDKDERITI-RGG--------KLMITYTRKSDAGKYVCVGTNM 187 (212)
T ss_dssp CCCEEEETTSCEEEECBCCCEESCCEEEEEET-TEEECTTSTTEEE-ETT--------EEEESSCCGGGCEEEEEEEEET
T ss_pred CCceEecCCCcEEEEEecCCCCCCCEEEEEEC-CccCCCCcceEEc-cCC--------eEEEeeCCHhhCeeEEEEEecc
Confidence 345668899999999999 9999999999999 7777654 33333 233 6999999999999999999999
Q ss_pred CCceEE-EEEEEEeccC
Q psy16261 84 LGGSEG-VIKVYNIGYF 99 (158)
Q Consensus 84 ~g~~~~-~~~l~v~~~~ 99 (158)
.|.... .+.|.|...|
T Consensus 188 ~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 188 VGERESEVAELTVLERP 204 (212)
T ss_dssp TEEEECCCEEEEEEC--
T ss_pred cCceecceEEEEEEeCc
Confidence 998655 4788887654
No 151
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=91.74 Aligned_cols=74 Identities=22% Similarity=0.333 Sum_probs=60.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+ .+.|+++ +..+.... . .|.|.+++.+|.|.|+|.+
T Consensus 4 i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~-g~~~~~~~-------~--------~l~i~~~~~~d~G~Y~C~~ 67 (262)
T 3rjd_A 4 ITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLN-GTATQTST-------P--------SYRITSASVNDSGEYRCQR 67 (262)
T ss_dssp EEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEET-TEECSCCS-------S--------EEEESSCCGGGCEEEEEEE
T ss_pred EecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEEC-CEEeeccC-------C--------eEEEecCCcccCeEEEEEE
Confidence 5567777789999999999999999988 9999999 77664331 1 6999999999999999999
Q ss_pred EcCCCceEEEE
Q psy16261 81 KNTLGGSEGVI 91 (158)
Q Consensus 81 ~n~~g~~~~~~ 91 (158)
.|..++....+
T Consensus 68 ~~~~~s~~~~l 78 (262)
T 3rjd_A 68 GLSGRSDPIQL 78 (262)
T ss_dssp SSSCCCCCEEE
T ss_pred ecCCccccEEE
Confidence 99876654333
No 152
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.37 E-value=2.9e-12 Score=92.08 Aligned_cols=89 Identities=16% Similarity=0.233 Sum_probs=64.2
Q ss_pred ceEEEecCCCEEEEeEEeecCCCe-eEEEcCCCeee----ecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPI-TFWTHENGSLI----HEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
....+.+|+.+.|.|.+.|.|.|. +.|+++ +..+ ........... ......+.|.|.+++.+|+|.|+|.|.
T Consensus 196 ~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 272 (290)
T 2o26_X 196 TSHLLKKGDTFTVVCTIKDVSTSVNSMWLKM-NPQPQHIAQVKHNSWHRGD--FNYERQETLTISSARVDDSGVFMCYAN 272 (290)
T ss_dssp SBCCCCTTCCEEEEEEEEESSTTCEEEEEEE-SSSEEECCCEECCEEEEET--TEEEEEEEEEESSCCSSSCEEEEEEEE
T ss_pred CcceEecCCcEEEEEEEecCCcceeEEEecC-CCCCccceeecccccccCc--eeeEEEEEEEEcCCCcccCeEEEEEEe
Confidence 334577899999999999999996 999999 5542 22221111110 011234589999999999999999999
Q ss_pred cCCCceEEEEEEEEecc
Q psy16261 82 NTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~ 98 (158)
|..|.....+.|.|...
T Consensus 273 N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 273 NTFGSANVTTTLKVVEK 289 (290)
T ss_dssp CSSCEEEEEEEECC---
T ss_pred CCCCcEEEEEEEEEEeC
Confidence 99999988888877654
No 153
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.37 E-value=3.9e-12 Score=89.26 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=63.8
Q ss_pred eecCceEEEecCCCEEEEeEEee---cCCCeeEEEcCCCeee-----e-------------------------cCCeEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVES---YPKPITFWTHENGSLI-----H-------------------------EGSRYHM 49 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g---~p~p~i~W~~~~~~~~-----~-------------------------~~~~~~~ 49 (158)
..++..+.+.+|+.+.|.|.+.+ .|.+.+.|+++ +... . ...|+.+
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKG-ASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEE-EETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeC-CCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 45667788999999999999998 88889999998 4321 0 0111111
Q ss_pred EEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce-----EEEEEEEEecc
Q psy16261 50 WTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS-----EGVIKVYNIGY 98 (158)
Q Consensus 50 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~ 98 (158)
... + ..+|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|...
T Consensus 85 ~~~--~----~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 85 ANL--A----APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp SCT--T----SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred ccC--C----cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 110 0 1269999999999999999999987753 44677777654
No 154
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=7.3e-12 Score=83.97 Aligned_cols=92 Identities=17% Similarity=0.304 Sum_probs=69.9
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+....+....... ....+.|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 6 MGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKD-GAVVQNLDQLYIPVSE---QHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -CCCEEEEEETTCCEEEEEEEESCSSCCEEEEET-TEECCSSEEEEEEEET---TEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred EeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEEC-CeecCCCCceEEEecC---CCceEEEEEeecCcccCeEEEEEEEc
Confidence 4567778899999999999999999999999999 8777666554443322 11235799999999999999999999
Q ss_pred CCCce-EEEEEEEEecc
Q psy16261 83 TLGGS-EGVIKVYNIGY 98 (158)
Q Consensus 83 ~~g~~-~~~~~l~v~~~ 98 (158)
..|.. ...+.|.|...
T Consensus 82 ~~~~~~~~~~~l~V~~~ 98 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGV 98 (182)
T ss_dssp CTTCEECCCEEEEEECS
T ss_pred CCCcEEEEEEEEEEecC
Confidence 87753 34566665543
No 155
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.37 E-value=1.4e-12 Score=87.42 Aligned_cols=72 Identities=22% Similarity=0.376 Sum_probs=57.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCe-eEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPI-TFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+. +.|+++ +..+.... +.|.|.+++.+|+|.|+|.+
T Consensus 10 i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~-~~~~~~~~---------------~~L~i~~~~~~d~G~Y~C~~ 73 (175)
T 1fnl_A 10 VFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHN-ESLISSQA---------------SSYFIDAATVNDSGEYRCQT 73 (175)
T ss_dssp EEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEET-TEEEESSC---------------SEEEESSCCGGGCEEEEEEC
T ss_pred EEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEEC-CEEccCCc---------------eEEEEeCCCcccCEEEEEEe
Confidence 34556666789999999999999998876 789999 76654321 16999999999999999999
Q ss_pred EcCCCceEE
Q psy16261 81 KNTLGGSEG 89 (158)
Q Consensus 81 ~n~~g~~~~ 89 (158)
.|..+....
T Consensus 74 ~n~~~s~~~ 82 (175)
T 1fnl_A 74 NLSTLSDPV 82 (175)
T ss_dssp SSSCCCCCE
T ss_pred eCCcccccE
Confidence 987654433
No 156
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.37 E-value=2.3e-12 Score=92.41 Aligned_cols=81 Identities=26% Similarity=0.485 Sum_probs=65.8
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC----eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS----RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
..+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.... ++...... +.|.|.++..+|+|.|+|.|.|..
T Consensus 206 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~-g~~~~~~~~~~~~~~~~~~~-------~~L~i~~v~~~d~G~Y~C~a~N~~ 277 (291)
T 1qz1_A 206 ATANLGQSVTLVCDADGFPEPTMSWTKD-GEPIENEEEDDEKHIFSDDS-------SELTIRNVDKNDEAEYVCIAENKA 277 (291)
T ss_dssp EETTSCCCEEEEEEEEEESCCEEEEEET-TEECCCC--CCSSEEECTTS-------CEEEECSCCGGGCEEEEEEEEETT
T ss_pred cccccCceEEEEEEEEEeCCCcEEEEEC-CEECcCCCCCCcceEEcCCC-------cEEEEEecChhcCEEEEEEEEeCC
Confidence 3456799999999999999999999999 77765543 33332211 369999999999999999999999
Q ss_pred CceEEEEEEEEec
Q psy16261 85 GGSEGVIKVYNIG 97 (158)
Q Consensus 85 g~~~~~~~l~v~~ 97 (158)
|.....+.|.|..
T Consensus 278 G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 278 GEQDASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CceEEEEEEEEEc
Confidence 9998888888764
No 157
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.37 E-value=3.5e-12 Score=86.05 Aligned_cols=79 Identities=22% Similarity=0.387 Sum_probs=61.4
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeee--cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH--EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+. ...++.....+ .|.|.++..+|+|.|+|.|.|.
T Consensus 103 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~--------~L~i~~v~~~d~G~Y~C~a~n~ 173 (189)
T 2v44_A 103 VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANN--------NLQILNINKSDEGIYRCEGRVE 173 (189)
T ss_dssp CCSEEEETTSCEEECCEEECSSCCEEEEEEE-C--CEECCCTTEEECTTS--------CEEETTCCGGGCEEEEEEEEET
T ss_pred CCcEEEeCCCCEEEEEEECcCCCCcEEEEEC-CcEEeccCCCCEEEecCC--------cEEEEEcCcccCeEEEEEEEcc
Confidence 3345688999999999999999999999999 65554 24555554443 6999999999999999999999
Q ss_pred CCceEEEEEE
Q psy16261 84 LGGSEGVIKV 93 (158)
Q Consensus 84 ~g~~~~~~~l 93 (158)
.|.......+
T Consensus 174 ~~~~~~~~~~ 183 (189)
T 2v44_A 174 ARGEIDFRDI 183 (189)
T ss_dssp TTTEEEEEEE
T ss_pred ccCceeeeeE
Confidence 8776544333
No 158
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.36 E-value=5.9e-12 Score=93.86 Aligned_cols=76 Identities=26% Similarity=0.424 Sum_probs=65.4
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..+.+|+.+.|.|.+.|.|.|.+.|+++ +..+..+ ++.+.. + .|.|.++..+|+|.|+|.|.|..|...
T Consensus 319 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~-~~~~~~-~--------~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 387 (395)
T 1bih_A 319 IVVKQGQDVTIPCKVTGLPAPNVVWSHN-AKPLSGG-RATVTD-S--------GLVIKGVKNGDKGYYGCRATNEHGDKY 387 (395)
T ss_dssp EEECTTSCEEEECEEEEESCCCCEEEET-TEECCSS-SEEEET-T--------EEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred eEecCCCeEEEEEEECcccCCeeEEEEC-CEECCCC-ceEEEC-C--------EEEEeeCCcccCEEEEEEEEccCCCce
Confidence 6688999999999999999999999999 7776544 554432 2 699999999999999999999999998
Q ss_pred EEEEEEE
Q psy16261 89 GVIKVYN 95 (158)
Q Consensus 89 ~~~~l~v 95 (158)
..+.|.|
T Consensus 388 ~~~~l~V 394 (395)
T 1bih_A 388 FETLVQV 394 (395)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888876
No 159
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.36 E-value=2.6e-12 Score=88.53 Aligned_cols=83 Identities=23% Similarity=0.418 Sum_probs=65.8
Q ss_pred CceEEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeec--------CCeEEEEEeecccceEEEEEEEcCCCCCCCeEE
Q psy16261 6 SQLIGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHE--------GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
+....+.+|+.+.|.|.+ .+.|.|.+.|+++ +..+.. ..++...... .|.|.+++.+|+|.|
T Consensus 115 ~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y 185 (217)
T 2vr9_A 115 PKDTRVAKGETALLECGPPKGIPEPTLIWIKD-GVPLDDLKAMSFGASSRVRIVDGG--------NLLISNVEPIDEGNY 185 (217)
T ss_dssp CCCEEECTTSCEEECCBCCCEESCCEEEEEET-TEEECCCCCC---CCCSEEEETTT--------EEEESSCCSTTCEEE
T ss_pred CCccEEcCCCeEEEEEECCCCCCCCeEEEEEC-CcCCCcccccccccCCcEEecCCC--------cEEEeeCCHHHCeEE
Confidence 445668899999999999 9999999999999 777662 2344333333 799999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEec
Q psy16261 77 KCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 77 ~C~a~n~~g~~~~~~~l~v~~ 97 (158)
+|.|.|..|.......+.+..
T Consensus 186 ~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 186 KCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp EEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEcccceeccccEEEEEE
Confidence 999999999887765554443
No 160
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.36 E-value=7.3e-12 Score=93.26 Aligned_cols=75 Identities=21% Similarity=0.378 Sum_probs=64.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.... . .|.|.++..+|+|.|+|.|.|..
T Consensus 313 ~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~-g~~i~~~~-------~--------~L~i~~v~~~d~G~Y~C~a~N~~ 376 (388)
T 2v5m_A 313 DPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKD-GKAIGHSE-------S--------VLRIESVKKEDKGMYQCFVRNDR 376 (388)
T ss_dssp ESSEEEECTTSCEEEEEEEEEECCCEEEEEET-TEECSCCS-------S--------EEEESSCCGGGCEEEEEEEECSS
T ss_pred CCCcEEecCCCCEEEEEEeccccCCeEEEEEC-CEECccCC-------C--------EEEEecCChhhCEEEEEEEEcCC
Confidence 34556688999999999999999999999999 77664332 1 69999999999999999999999
Q ss_pred CceEEEEEEEE
Q psy16261 85 GGSEGVIKVYN 95 (158)
Q Consensus 85 g~~~~~~~l~v 95 (158)
|.....+.|.|
T Consensus 377 G~~~~~~~l~V 387 (388)
T 2v5m_A 377 ESAEASAELKL 387 (388)
T ss_dssp CEEEEEEEEEE
T ss_pred CcEEEEEEEEe
Confidence 99988888865
No 161
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.36 E-value=4.5e-12 Score=94.52 Aligned_cols=84 Identities=14% Similarity=0.261 Sum_probs=68.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC---CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG---SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
++..+.+.+|+.+.|.|.+.| |.|.+.|+++++..+... .++.+ ..+ .|.|.+++.+|+|.|+|.|.
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~--------~L~I~~v~~~D~G~Y~C~a~ 321 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNG--------DLFFKKVQVEDGGVYTCYAM 321 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETT--------EEEESSCCTTSCEEEEEEEE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecC--------eEEEeecCcccCEEEEEEEe
Confidence 345567899999999999999 999999999844433322 35666 444 79999999999999999999
Q ss_pred cCCCceEEEEEEEEecc
Q psy16261 82 NTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~ 98 (158)
|..|.....+.|.|...
T Consensus 322 N~~g~~~~~~~l~V~~~ 338 (361)
T 2xot_A 322 GETFNETLSVELKVYNF 338 (361)
T ss_dssp CSSCEEEEEEEEEEESS
T ss_pred cCCCccEEEEEEEEEee
Confidence 99999999999988653
No 162
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.36 E-value=3.4e-12 Score=92.25 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=65.4
Q ss_pred EEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+.+.|.| .+.|+++ +..+..+.++.+... .+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 231 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~-g~~~~~~~~~~~~~~-------~~~L~I~~v~~~d~G~Y~C~a~N~~G~~ 302 (312)
T 2y23_A 231 WEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDG-------ICTLLITEFSKKDAGIYEVILKDDRGKD 302 (312)
T ss_dssp EEEETTTEEEEEEEEESCCSSCEEEEEET-TEEEEEECCC----C-------EEEEEECSCSGGGCEEEEEEEESTTCCE
T ss_pred EEEeCCCEEEEEEEEcCCCCCCEEEEeeC-CEECCCCCcEEEECC-------EEEEEECcCCHHHCEEEEEEEEcCCCce
Confidence 568899999999999999998 9999999 887775555544422 2479999999999999999999999999
Q ss_pred EEEEEEEE
Q psy16261 88 EGVIKVYN 95 (158)
Q Consensus 88 ~~~~~l~v 95 (158)
...+.|.+
T Consensus 303 ~~~~~l~i 310 (312)
T 2y23_A 303 KSRLKLVD 310 (312)
T ss_dssp EEEEEECS
T ss_pred eeeeEEEe
Confidence 88888765
No 163
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.36 E-value=1.7e-12 Score=96.53 Aligned_cols=124 Identities=16% Similarity=0.148 Sum_probs=86.9
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.+.|.|.+.|+++ +..+.. ++. .. ...|.|.+++.+|.|.|+|.|.|..|
T Consensus 214 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~-~~~~~~--~~~-~~--------~~~L~i~~~~~~d~G~Y~C~a~n~~g 281 (382)
T 1cs6_A 214 PADTYALTGQMVTLECFAFGNPVPQIKWRKL-DGSQTS--KWL-SS--------EPLLHIQNVDFEDEGTYECEAENIKG 281 (382)
T ss_dssp CSEEEEETTCCEEEECEEEEESCCEEEEEEC-CSCCSC--CCS-BS--------SSEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCceEEeCCCeEEEEEEEccCCCCEEEEEEC-Cccccc--EEe-cC--------CcEEEEccCChhhCEEEEEEEEcCCC
Confidence 3456688999999999999999999999998 443322 110 01 12699999999999999999999999
Q ss_pred ceEEEEEEEEeccCCC------------------------CCc---------cc----------chhhhhhhcccccccc
Q psy16261 86 GSEGVIKVYNIGYFGS------------------------DTQ---------YV----------TDEEMQRTNQIARSKW 122 (158)
Q Consensus 86 ~~~~~~~l~v~~~~~~------------------------~~~---------~~----------~~~~~~~~~~~~~~~~ 122 (158)
.....+.|.|...+.. +.. .+ ..+.+......+.|.|
T Consensus 282 ~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 361 (382)
T 1cs6_A 282 RDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMY 361 (382)
T ss_dssp EEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEE
T ss_pred eEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEE
Confidence 8877777766543210 000 00 0122223334556666
Q ss_pred cCcccceEeeeccCCceEEEEccccC
Q psy16261 123 GSERTNQIARSKWGSGYRYTSGPIRL 148 (158)
Q Consensus 123 g~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (158)
.|.+.|..|....++.|.|
T Consensus 362 -------~C~a~N~~G~~~~~~~l~V 380 (382)
T 1cs6_A 362 -------QCVAENKHGTVYASAELTV 380 (382)
T ss_dssp -------EEEEEETTEEEEEEEEEEE
T ss_pred -------EEEEEeCCCeEEEEEEEEE
Confidence 9999999999988888775
No 164
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.36 E-value=1.4e-11 Score=88.11 Aligned_cols=90 Identities=12% Similarity=0.129 Sum_probs=67.2
Q ss_pred CceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 6 SQLIGARLAAPLTLDCHVES-YPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
+....+.+|+.+.|.|.+.+ .|.+.+.|+++ +..+........ ....+...+.|.|.+++.+|.|.|+|.|.|..
T Consensus 193 ~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~~~~~~~~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 268 (289)
T 3ejj_X 193 PSKLVRIRGEAAQIVCSATNAEVGFNVILKRG-DTKLEIPLNSDF---QDNYYKKVRALSLNAVDFQDAGIYSCVASNDV 268 (289)
T ss_dssp SSSEECCSSSCEEEEEEEEESSSCCEEEEEET-TEECCCCEEEEE---CSSSEEEEEEEEESSCCSSSCEEEEEEEECSS
T ss_pred CCceEEEeCCcEEEEEEeCCCCCceEEEEEEC-CEEeeccCCccc---ccceEEeeEEEEEEeecccCCEEEEEEEEcCC
Confidence 33444568999999999999 78999999999 776644322111 11222234589999999999999999999999
Q ss_pred CceEEEEEEEEeccC
Q psy16261 85 GGSEGVIKVYNIGYF 99 (158)
Q Consensus 85 g~~~~~~~l~v~~~~ 99 (158)
|....++.|.+...+
T Consensus 269 G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 269 GTRTATMNFQVVESH 283 (289)
T ss_dssp CEEEEEEEEECC---
T ss_pred CCccccEEEEEEecc
Confidence 999999998876643
No 165
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.36 E-value=4.3e-12 Score=85.22 Aligned_cols=82 Identities=20% Similarity=0.203 Sum_probs=59.6
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec--C----------CeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE--G----------SRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
+.+.+.+|+.+.|.|.+.+ |.+.+.|+++ +..+.. . .|+.+.. ..++|.|.+++.+|+|
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~-~~~i~~~~~~~~~~~~~~~~R~~~~~-------~~~sL~I~~v~~~DsG 73 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLKEVLWKKQ-KDKVAELENSEFRAFSSFKNRVYLDT-------VSGSLTIYNLTSSDED 73 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCSCEEEEET-TEEEEEEETTEEEECGGGTTSEEECT-------TTCCEEECSCCGGGCE
T ss_pred cEEEEEcCCCEEEcCCCCC-CcceEEEEeC-CcEEEEEcCCCcccccccCCcEEEeC-------CCCeEEECCCChhhCc
Confidence 4567889999999999854 8899999998 543321 1 1222210 1137999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEeccC
Q psy16261 75 TYKCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 75 ~Y~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
.|.|.+.|..| ...+.|.|...+
T Consensus 74 ~Y~C~~~n~~~--~~~~~L~V~~~~ 96 (171)
T 1ccz_A 74 EYEMESPNITD--TMKFFLYVLEMV 96 (171)
T ss_dssp EEEEECTTCCS--CEEEEEEEECCC
T ss_pred eEEEEEeCCCC--cEEEEEEEECcC
Confidence 99999999887 556667666543
No 166
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.36 E-value=3e-12 Score=92.71 Aligned_cols=81 Identities=19% Similarity=0.263 Sum_probs=63.3
Q ss_pred ceEEEecCCCEEEEeEEeec-CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESY-PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
..+.+.+|+.+.|.|.+.+. |.+.+.|+++ +..+....++..... .+.|.|.+++.+|+|.|+|.+.|..|
T Consensus 14 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~-------~~~L~i~~~~~~d~G~Y~C~~~n~~g 85 (317)
T 2y25_A 14 LSWEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDG-------ICTLLITEFSKKDAGIYEVILKDDRG 85 (317)
T ss_dssp EEEEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCSCC-----C-------CEEEEETTCCSTTCSCEEEEEESSSC
T ss_pred eeEEECCCCeEEEEEEEcCCCCCCEEEEEEC-CeEcCCCCcEEEECC-------eEEEEEccCCcccCeEEEEEEECCCC
Confidence 34678899999999999988 7789999999 887776666554422 14799999999999999999999988
Q ss_pred ceEEEEEEEE
Q psy16261 86 GSEGVIKVYN 95 (158)
Q Consensus 86 ~~~~~~~l~v 95 (158)
.....+.|.+
T Consensus 86 ~~~~~~~l~v 95 (317)
T 2y25_A 86 KDKSRLKLVD 95 (317)
T ss_dssp EEEEEECCST
T ss_pred cEEEEEEEEE
Confidence 7766655543
No 167
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.35 E-value=1.2e-12 Score=90.41 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=53.2
Q ss_pred CceEEEecC--CCEEEEeEEeecCCCeeEEEcC--CCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 6 SQLIGARLA--APLTLDCHVESYPKPITFWTHE--NGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 6 ~~~~~~~~g--~~v~l~C~~~g~p~p~i~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+..+.+.+| +.+.|.|.+.+ |.+.+.|++. ++..+..+.++...... .|.|.+++.+|+|.|+|.|.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~--------~l~I~~v~~~D~G~Y~C~a~ 84 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK--------GFTIPSYMISYAGMVFCEAK 84 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT--------EEEEEGGGTTTCSEEEEEEC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc--------cEEEccCChhcCceEEEEEE
Confidence 467788899 99999999986 7789999773 36665555444443333 69999999999999999999
Q ss_pred cCCCc
Q psy16261 82 NTLGG 86 (158)
Q Consensus 82 n~~g~ 86 (158)
|..+.
T Consensus 85 n~~~~ 89 (213)
T 2x1w_L 85 INDES 89 (213)
T ss_dssp ----C
T ss_pred ECCee
Confidence 85443
No 168
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.35 E-value=2.1e-12 Score=92.64 Aligned_cols=84 Identities=13% Similarity=0.031 Sum_probs=63.8
Q ss_pred cCceEEEecCCCEEEEeEEeecCC--CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPK--PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
.+....+.+|+.+.|.|.+.+ |. +.+.|+++++..+....++...... .|.|.+++.+|.|.|+|.+.|
T Consensus 95 ~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y~C~a~n 165 (292)
T 4dkd_C 95 LAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH--------GFTIHRAKFIQSQDYQCSALM 165 (292)
T ss_dssp SCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSS--------CCEETTCCGGGCSEEEEEECS
T ss_pred cCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCc--------eEEECCCCHHHCeEEEEEEEe
Confidence 344567889999999999998 44 7899998755655555555444433 599999999999999999999
Q ss_pred CCCceE-EEEEEEEec
Q psy16261 83 TLGGSE-GVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~~-~~~~l~v~~ 97 (158)
..+... ..+.|.|..
T Consensus 166 ~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 166 GGRKVMSISIRLKVQK 181 (292)
T ss_dssp TTSCEECCCEEEEEEC
T ss_pred CCCceeEEEEEEEEeC
Confidence 877553 356666664
No 169
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.35 E-value=8.4e-12 Score=84.04 Aligned_cols=76 Identities=17% Similarity=0.136 Sum_probs=64.1
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..+.+|+.+.|.|.+.+.|.|.+.|+++ +..+ ..... .|.|.+++.+|+|.|+|.|.|..+...
T Consensus 107 ~~v~~g~~~~l~C~~~~~p~~~v~W~~~-~~~~-------~~~~~--------~L~i~~v~~~d~G~Y~C~a~n~~~~~~ 170 (184)
T 2ny1_B 107 THLLQGQSLTLTLESPPGSSPSVQCRSP-RGKN-------IQGGK--------TLSVSQLELQDSGTWTCTVLQNQKKVE 170 (184)
T ss_dssp SEEETTCCEEEEEECCTTCCCEEEEECT-TSCE-------EEESS--------EEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceeecCCCEEEEEEcCCCCCCEEEEEeC-CCcc-------ccCce--------EEEEecCCcCCCeEEEEEEEECCceEE
Confidence 4578999999999999999999999999 4433 11222 699999999999999999999999989
Q ss_pred EEEEEEEeccCC
Q psy16261 89 GVIKVYNIGYFG 100 (158)
Q Consensus 89 ~~~~l~v~~~~~ 100 (158)
..+.|.|.+.+.
T Consensus 171 ~~~~l~V~~~p~ 182 (184)
T 2ny1_B 171 FKIDIVVLAFQK 182 (184)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEEEecCC
Confidence 999999887654
No 170
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.35 E-value=7.4e-12 Score=86.66 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=69.8
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEc----CCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTH----ENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCN 79 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 79 (158)
+....+.+|+.+.|.|.+.+.|.|.+.|++ + +..+.... ...............+.|.|.++...|+|.|+|.
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 203 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN-GSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICK 203 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBT-TBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCC-CccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEE
Confidence 345678899999999999999999999999 6 65554332 1222211111111123699999999999999999
Q ss_pred EEcCCCceEEEEEEEEeccCCCCC
Q psy16261 80 AKNTLGGSEGVIKVYNIGYFGSDT 103 (158)
Q Consensus 80 a~n~~g~~~~~~~l~v~~~~~~~~ 103 (158)
|.|..|.....+.|.|...+..+.
T Consensus 204 a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 204 VSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp EEETTEEEEEEEEEEEECCC----
T ss_pred EEeccceEeeEEEEEEecCCCCCc
Confidence 999999999999999988765543
No 171
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.34 E-value=1.5e-11 Score=89.13 Aligned_cols=69 Identities=20% Similarity=0.311 Sum_probs=56.3
Q ss_pred EEEecCCCEEEEeEE------eecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 9 IGARLAAPLTLDCHV------ESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~------~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
..+..|+.+.|.|.+ .|.|.|.+.|+++ +..+... .++ ..... .|.|.+++.+|+|.|+|.|.
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~-~~~l~~~~~~~-~~~~~--------~L~i~~v~~~d~G~Y~C~a~ 182 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD-CKPLLLDNIHF-SGVKD--------RLIVMNVAEKHRGNYTCHAS 182 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEET-TEECCCCSSSE-EEETT--------EEEESSCCGGGCEEEEEEEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEEC-CEECCCccceE-eecCc--------eEEEEeceehhCcEEEEEEE
Confidence 457889999999998 8999999999999 7776543 333 22222 69999999999999999999
Q ss_pred -cCCCce
Q psy16261 82 -NTLGGS 87 (158)
Q Consensus 82 -n~~g~~ 87 (158)
|..|..
T Consensus 183 ~n~~g~~ 189 (315)
T 1itb_B 183 YTYLGKQ 189 (315)
T ss_dssp EEETTEE
T ss_pred cCCCCcE
Confidence 788876
No 172
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=8.5e-12 Score=92.28 Aligned_cols=87 Identities=18% Similarity=0.153 Sum_probs=67.8
Q ss_pred EecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEee--cccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEK--FSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..+|+.+.|.|.+.|.|.|.+.|+++ +..+....+....... .+.....+.|.|.+++.+|+|.|+|.|.|..|...
T Consensus 258 ~~~g~~v~l~C~~~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 336 (347)
T 2ifg_A 258 AVEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 336 (347)
T ss_dssp CEESSSEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CccCceEEEEEEeeecCCCcEEEEeC-CEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCcee
Confidence 45689999999999999999999999 8777655443332111 01222345799999999999999999999999998
Q ss_pred EEEEEEEecc
Q psy16261 89 GVIKVYNIGY 98 (158)
Q Consensus 89 ~~~~l~v~~~ 98 (158)
..+.|.|...
T Consensus 337 ~~~~l~V~~~ 346 (347)
T 2ifg_A 337 ASIMAAFMDN 346 (347)
T ss_dssp EEEEECSCCC
T ss_pred eEEEEEecCC
Confidence 8888877654
No 173
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.34 E-value=3.2e-11 Score=98.01 Aligned_cols=93 Identities=26% Similarity=0.308 Sum_probs=72.8
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....++.............+.|.|.++..+|+|.|+|.|.|..|
T Consensus 436 ~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 514 (816)
T 3dmk_A 436 FQEETMEPGPSVFLKCVAGGNPTPEISWELD-GKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVG 514 (816)
T ss_dssp CCCEEECSSSCEEEEEEEECSSCCEEEEEET-TEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTE
T ss_pred CcceEEcCCCCEEEEEEEecCCCCEEEEEEC-CEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCC
Confidence 3345678899999999999999999999999 887776666654332111222345799999999999999999999999
Q ss_pred ceEEEEEEEEeccC
Q psy16261 86 GSEGVIKVYNIGYF 99 (158)
Q Consensus 86 ~~~~~~~l~v~~~~ 99 (158)
.......|.|...+
T Consensus 515 ~~~~~~~l~V~~~p 528 (816)
T 3dmk_A 515 VAEHSAKLNVYGLP 528 (816)
T ss_dssp EEEEEEEEEECSSC
T ss_pred eEEEEEEEEEecCC
Confidence 98888888876543
No 174
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.34 E-value=8.3e-12 Score=92.56 Aligned_cols=90 Identities=7% Similarity=0.028 Sum_probs=65.7
Q ss_pred ceEEEecCCCEEEEeEEee-----cCCCeeEEEcCCCeeeec--------CCeEEEEEeeccc-----ceEEEEEEEcCC
Q psy16261 7 QLIGARLAAPLTLDCHVES-----YPKPITFWTHENGSLIHE--------GSRYHMWTEKFSS-----YKFYMRLYIGSL 68 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g-----~p~p~i~W~~~~~~~~~~--------~~~~~~~~~~~~~-----~~~~~~l~i~~v 68 (158)
..+.+.+|+.+.|.|.+.+ .|.|.+.|+++ +..+.. +.++.+.....+. ......|.|.++
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 262 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAE-RASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQA 262 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEES-SCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSB
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecC-CCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccC
Confidence 4456788999999998888 78899999999 665544 3444443211000 000127999999
Q ss_pred CCCCCeEEEEEEEcC--CCceEEEEEEEEec
Q psy16261 69 SKSDFGTYKCNAKNT--LGGSEGVIKVYNIG 97 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~ 97 (158)
+.+|+|.|+|.|.|. .|.....+.|.|..
T Consensus 263 ~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~ 293 (363)
T 1wio_A 263 LPQYAGSGNLTLALEAKTGKLHQEVNLVVMR 293 (363)
T ss_dssp CGGGCEEEEEEECBTTTTCCEEEEEEEEEEE
T ss_pred CcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE
Confidence 999999999999999 99888887777654
No 175
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.33 E-value=1.2e-11 Score=92.34 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=67.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC---eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS---RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.... +... ... .|.|.++..+|+|.|+|.|.
T Consensus 318 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~-~~~--------~L~i~~v~~~d~G~Y~C~a~ 387 (404)
T 3p3y_A 318 EPKNLILAPGEDGRLVCRANGNPKPTVQWMVN-GEPLQSAPPNPNREV-AGD--------TIIFRDTQISSRAVYQCNTS 387 (404)
T ss_dssp CCCCEEECTTCCEEEECEEEEESCCEEEEEET-TEEGGGSCCCTTEEE-ETT--------EEEESSCCSSCCCEEEEEEE
T ss_pred cCCcceeecCCcEEEEEEccccCCCceEEEEC-CEecCCCCCCceEEe-cCC--------EEEEeecCHHHCEEEEEEEE
Confidence 44556688899999999999999999999999 77765442 2221 222 69999999999999999999
Q ss_pred cCCCceEEEEEEEEec
Q psy16261 82 NTLGGSEGVIKVYNIG 97 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~ 97 (158)
|..|.....+.|.|.+
T Consensus 388 N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 388 NEHGYLLANAFVSVLD 403 (404)
T ss_dssp ETTEEEEEEEEEEEC-
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999999888887754
No 176
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.33 E-value=6.5e-12 Score=90.19 Aligned_cols=81 Identities=7% Similarity=0.073 Sum_probs=62.7
Q ss_pred CceEEEecCCCEEEEeEEeecCC-CeeEE-EcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCe-EEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPK-PITFW-THENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG-TYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~-p~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~Y~C~a~n 82 (158)
+..+.+.+|+.+.|.|.+.+ |. +.+.| .++ +..+....++...... .|.|.+++.+|.| .|+|.|.|
T Consensus 98 ~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~-g~~l~~~~~~~~~~~~--------~L~i~~v~~~d~G~~Y~C~a~n 167 (290)
T 2o26_X 98 GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECD-GKSLPTDLTFVPNPKA--------GITIKNVKRAYHRLCVRCAAQR 167 (290)
T ss_dssp CCCEEEETTSCEEECCCBSC-CSCEEEEEEETT-SCCCCTTCEEEEETTT--------EEEEESCCGGGTTCEEEEEEEE
T ss_pred ccceEEecCCeEEEeCcCCC-CCCceEEEEeCC-CcCCCCCCceeeCCCC--------CEEEecccHHHCCCEEEEEEEE
Confidence 44566789999999999996 77 89999 566 7777766666555444 6999999999999 99999999
Q ss_pred CCCceE-EEEEEEEe
Q psy16261 83 TLGGSE-GVIKVYNI 96 (158)
Q Consensus 83 ~~g~~~-~~~~l~v~ 96 (158)
..+... ..+.|.|.
T Consensus 168 ~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 168 DGTWLHSDKFTLKVR 182 (290)
T ss_dssp TTEEEECCCEEEEEE
T ss_pred CCceEEeEEEEEEEE
Confidence 855432 24566554
No 177
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.32 E-value=1.1e-12 Score=87.98 Aligned_cols=75 Identities=23% Similarity=0.321 Sum_probs=56.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+ .+.|+++ +..+... . +.|.|.+++.+|+|.|+|.+
T Consensus 7 i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~-~~~~~~~-------~--------~~L~i~~v~~~d~G~Y~C~~ 70 (176)
T 1f2q_A 7 VSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHN-GSLSEET-------N--------SSLNIVNAKFEDSGEYKCQH 70 (176)
T ss_dssp CEEESSCSEEETTCCEEEECCTTCC----CCEEEET-TEECSCC-------S--------SEEEECSCCGGGCEEEEEEC
T ss_pred EEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEEC-CeECCCC-------c--------eEEEEeccceecCEEEEEEc
Confidence 4455666678999999999999998886 6999999 7665432 1 16999999999999999999
Q ss_pred EcCCCceEEEEE
Q psy16261 81 KNTLGGSEGVIK 92 (158)
Q Consensus 81 ~n~~g~~~~~~~ 92 (158)
.|..+.....+.
T Consensus 71 ~~~~~s~~~~l~ 82 (176)
T 1f2q_A 71 QQVNESEPVYLE 82 (176)
T ss_dssp TTSSCCCCEEEE
T ss_pred CCccccccEEEE
Confidence 997765544333
No 178
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.32 E-value=7.6e-12 Score=84.59 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=56.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+.. .+.+|+++.|.|.+.+ +.+.+.|+|+ +... ..... .|.|.+++.+|+|.|+|.+.|
T Consensus 12 ~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~-g~~~-------~~~~~--------~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 12 QALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKL-SSSR-------YQDQA--------VLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp EEESCS-EEETTCCEEEEEECST-TCSEEEEEET-TTCC-------EESSS--------EEEESSCCGGGCEEEEEEEEE
T ss_pred EeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEEC-Cccc-------cCccc--------EEEECcCChhhCceEEEEEEc
Confidence 344444 5889999999999988 7889999999 5431 11112 699999999999999999999
Q ss_pred CCCce--EEEEEEEEec
Q psy16261 83 TLGGS--EGVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~--~~~~~l~v~~ 97 (158)
..|.. +..+.|.|..
T Consensus 74 ~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATG 90 (184)
T ss_dssp TTEEBCCCCCEEEEEES
T ss_pred CCCccCCCCCEEEEecC
Confidence 87632 3345555543
No 179
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.32 E-value=1.1e-11 Score=91.21 Aligned_cols=80 Identities=18% Similarity=0.083 Sum_probs=61.0
Q ss_pred eEEEecCCCEEEEeEE-----eecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 8 LIGARLAAPLTLDCHV-----ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~-----~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+.+|+.+.|.|.+ .|.|.|.+.|+++ +..+....++.... . .|.|.+++.+|+|.|+|.|.|
T Consensus 129 ~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~-~~~l~~~~~~~~~~-~--------~L~i~~v~~~d~G~Y~C~a~n 198 (349)
T 4dep_C 129 HKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMG-CYKIQNFNNVIPEG-M--------NLSFLIALISNNGNYTCVVTY 198 (349)
T ss_dssp EEEETTCSEEEEECCSCTTSSCTTSCCEEEEEET-TEECCSCSSEEEET-T--------EEEEESCCGGGCEEEEEEEEE
T ss_pred ceeeecCccEEEEcCCCcccccCCCCceEEEeeC-CEECCCccceeecC-C--------EEEEeeeeecCCcEEEEEEEE
Confidence 4457789999999985 7889999999999 77775443332221 2 699999999999999999999
Q ss_pred CC-Cce---EEEEEEEEec
Q psy16261 83 TL-GGS---EGVIKVYNIG 97 (158)
Q Consensus 83 ~~-g~~---~~~~~l~v~~ 97 (158)
.. |.. ...+.|.|..
T Consensus 199 ~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 199 PENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp EETTEEEEEEEEEEEEEEC
T ss_pred eeCCEEEEEEEEEEEEEEc
Confidence 87 443 4556666643
No 180
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.32 E-value=9.3e-12 Score=86.20 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=64.0
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.+.|.|.+.|+++ +..+..... . .|.|.++..+|.|.|+|.|.|..
T Consensus 124 ~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~-~~~~~~~~~------~--------~L~i~~v~~~d~G~Y~C~a~n~~ 188 (218)
T 3k0w_A 124 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHETK------K--------LYMVPYVDLEHQGTYWCHVYNDR 188 (218)
T ss_dssp CCCCEEECTTCCEEEECEEEBSSCCEEEEEET-TEECTTCCS------S--------EEEESSCCGGGCEEEEEEEECSS
T ss_pred CCCceeecCCCcEEEEEEecccCCCeEEEEEC-CEECCCCCC------C--------EEEEeecChhcCEEEEEEEEcCC
Confidence 34456788999999999999999999999999 776654322 1 69999999999999999999998
Q ss_pred Cce-EEEEEEEEecc
Q psy16261 85 GGS-EGVIKVYNIGY 98 (158)
Q Consensus 85 g~~-~~~~~l~v~~~ 98 (158)
|.. +..+.|.|...
T Consensus 189 g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 189 DSQDSKKVEIIIDEL 203 (218)
T ss_dssp CEEECCCEEEEECC-
T ss_pred CCceeeeEEEEEeCC
Confidence 874 55677777653
No 181
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.32 E-value=9e-12 Score=90.37 Aligned_cols=87 Identities=22% Similarity=0.303 Sum_probs=67.0
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEE-----EEeec--ccceEEEEEEEcCCCCCC-CeEEEEEE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHM-----WTEKF--SSYKFYMRLYIGSLSKSD-FGTYKCNA 80 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~l~i~~v~~~d-~G~Y~C~a 80 (158)
+.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+....+... ..... ......+.|.|.++..+| +|.|+|.|
T Consensus 219 ~~~~~g~~v~l~C~~~g~P~p~i~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a 297 (315)
T 1itb_B 219 MEVDLGSQIQLICNVTGQLSDIAYWKWN-GSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFA 297 (315)
T ss_dssp EECCSSSCEEEEEEEEECTTSEEEEEET-TEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEE
T ss_pred EEEeCCCcEEEEEEEecCCCCeeEEEEC-CEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEE
Confidence 4678899999999999999999999999 877765432111 11100 011234579999999999 99999999
Q ss_pred EcCCCceEEEEEEEEe
Q psy16261 81 KNTLGGSEGVIKVYNI 96 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~ 96 (158)
.|..|.....+.|.|.
T Consensus 298 ~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 298 KNTHGIDAAYIQLIYP 313 (315)
T ss_dssp ECTTCCEEEEEEEECC
T ss_pred ecCCCceeEEEEEEec
Confidence 9999999998888764
No 182
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.31 E-value=6.8e-12 Score=84.67 Aligned_cols=82 Identities=21% Similarity=0.352 Sum_probs=63.3
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec--CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE--GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
.+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++.....+ .|.|.+++.+|+|.|+|.|.|
T Consensus 106 ~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~--------~L~i~~~~~~d~G~Y~C~a~n 176 (191)
T 1epf_A 106 APTPQEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILKKDVRFIVLSNN--------YLQIRGIKKTDEGTYRCEGRI 176 (191)
T ss_dssp CCSSEECCTTSCEEECCEEECSSCCEEEEEET-TEEGGGGCCTTEEECTTS--------CEEETTCCGGGCEEEEEEEEE
T ss_pred CCCcEeecCCCeEEEEEEECCCCCCEEEEEEC-CEEeeccCCceEEEecCC--------eEEECCCChhhCEEEEEEEEE
Confidence 34455678899999999999999999999999 776643 2355444333 699999999999999999999
Q ss_pred CCCceEEEEEEEE
Q psy16261 83 TLGGSEGVIKVYN 95 (158)
Q Consensus 83 ~~g~~~~~~~l~v 95 (158)
..+.......+.|
T Consensus 177 ~~~~~~~~~~i~v 189 (191)
T 1epf_A 177 LARGEINFKDIQV 189 (191)
T ss_dssp GGGTEEEEEEEEE
T ss_pred ecceeEEEEEEEE
Confidence 9866554444433
No 183
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.31 E-value=5.4e-12 Score=85.57 Aligned_cols=76 Identities=17% Similarity=0.249 Sum_probs=57.3
Q ss_pred cCceEEEecCCCEEEEeE-EeecCC-CeeEEEcCCCeeee--cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCH-VESYPK-PITFWTHENGSLIH--EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~-~~g~p~-p~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
++..+.+.+|+.+.|.|. +.+.|. +.+.|+++ +..+. ...+....... +.|.|.+++.+|+|.|+|.+
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~-~~~~~~~~~~~~~~~~~~-------~~L~i~~v~~~d~G~Y~C~~ 85 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN-EFPVFITMDKRRFVSQTN-------GNLYIANVEASDKGNYSCFV 85 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEES-STTCBCCCSSSEEECTTT-------CCEEESSCCGGGCEEEEEEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEEC-CceeeeeeCCCeEEEcCC-------CeEEECcCCcccCeEEEEEE
Confidence 346678999999999999 899998 99999999 55443 12222222111 26999999999999999999
Q ss_pred EcCCCceE
Q psy16261 81 KNTLGGSE 88 (158)
Q Consensus 81 ~n~~g~~~ 88 (158)
.|..+...
T Consensus 86 ~~~~~~~~ 93 (201)
T 3s97_C 86 SSPSITKS 93 (201)
T ss_dssp EEGGGTEE
T ss_pred EecCCCcc
Confidence 99765543
No 184
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.31 E-value=9.8e-12 Score=98.53 Aligned_cols=125 Identities=10% Similarity=0.089 Sum_probs=90.1
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..+.+|+.+.|.|.+.+ |.+.+.|+++ +..+....++.+.... +.|.|.+++..|+|.|+|.|.|..|...
T Consensus 477 ~~v~~g~~v~l~C~~~~-~~~~i~W~~~-g~~l~~~~~~~~~~~~-------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 477 KPVEDKDAVAFTCEPEA-QNTTYLWWVN-GQSLPVSPRLQLSNGN-------RTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred eeecCCCeEEEEEECCC-CCcEEEEEEC-CEeCCCCCcEEEcCCC-------cEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 44678999999999994 8889999999 8887777766654322 3799999999999999999999999753
Q ss_pred E-EEEEEEeccCCCCCc----------------------------------cc---chhhhhhhcccccccccCcccceE
Q psy16261 89 G-VIKVYNIGYFGSDTQ----------------------------------YV---TDEEMQRTNQIARSKWGSERTNQI 130 (158)
Q Consensus 89 ~-~~~l~v~~~~~~~~~----------------------------------~~---~~~~~~~~~~~~~~~~g~~~~~~~ 130 (158)
. .+.|.|...|..+.. .+ ..+.+......+.|.| .
T Consensus 548 s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~~L~i~~~~~~d~G~Y-------~ 620 (642)
T 1e07_A 548 SDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTY-------A 620 (642)
T ss_pred CCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCceEEECcccccCCeEE-------E
Confidence 3 566666543321100 00 0122233344556666 9
Q ss_pred eeeccCCceEEEEccccCC
Q psy16261 131 ARSKWGSGYRYTSGPIRLP 149 (158)
Q Consensus 131 ~~~~~~~g~~~~~~~~~~~ 149 (158)
|.+.|..|....++.+.|.
T Consensus 621 C~a~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 621 CFVSNLATGRNNSIVKSIT 639 (642)
T ss_pred EEEEecccCcceeEEEEEE
Confidence 9999999999888887763
No 185
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.31 E-value=8.9e-12 Score=88.44 Aligned_cols=91 Identities=13% Similarity=0.279 Sum_probs=59.0
Q ss_pred eeecCceEEEecCCCEEEEeEEe---ecCCCeeEEEcCCCeeeec------------------CCeEEEEEeecccceEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVE---SYPKPITFWTHENGSLIHE------------------GSRYHMWTEKFSSYKFY 60 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~---g~p~p~i~W~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~ 60 (158)
+.+++..+.+.+|+.+.|.|.+. +.+.+.+.|+++ +..... ..++.+... .....
T Consensus 8 v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~ 83 (268)
T 3mj6_A 8 LTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFS-KDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGD---TFHND 83 (268)
T ss_dssp ----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEE-SSSTTCCEEEEEEETTEEEECGGGTTTEEECSC---TTTTB
T ss_pred cccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEe-CCCCCceEEEEEEcCCCcccCccccCceEEeec---CCCCE
Confidence 34567778899999999999998 777889999997 321110 122222110 00011
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcCCCce--EEEEEEEEe
Q psy16261 61 MRLYIGSLSKSDFGTYKCNAKNTLGGS--EGVIKVYNI 96 (158)
Q Consensus 61 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~ 96 (158)
++|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|.
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 369999999999999999999876554 334555543
No 186
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.31 E-value=8.8e-12 Score=78.12 Aligned_cols=86 Identities=14% Similarity=0.045 Sum_probs=63.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeee----------------e---cCCeEEEEEeecccceEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLI----------------H---EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~----------------~---~~~~~~~~~~~~~~~~~~~~l 63 (158)
++.+....+.+|+++.|.|.......+.+.|+|+ .... . ..+|..+..++ +|
T Consensus 4 ~i~~~p~~~~~G~~v~L~~~~~p~~~~~i~W~kg-~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ng--------SL 74 (111)
T 2qsq_A 4 TIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKG-ERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA--------SL 74 (111)
T ss_dssp EEEEESSEEETTSCEEEEEESCCSSEEEEEEEES-SSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTS--------CE
T ss_pred EEEeccceeccCCCEEEEEeCCCCCceEEEEEeC-CCCCCCcEEEEEECCCcceecCcccCCcEEEecCC--------cE
Confidence 4555555789999999999864444457899987 3211 0 13566665555 89
Q ss_pred EEcCCCCCCCeEEEEEEEcCCC-ceEEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLG-GSEGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|+|.+.+..+ ..+..+.|.|..
T Consensus 75 ~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 75 LIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EECSCCGGGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEccCcccCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999999999999999866 457777887764
No 187
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.31 E-value=2.7e-12 Score=98.28 Aligned_cols=88 Identities=18% Similarity=0.260 Sum_probs=67.4
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC---CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG---SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
..+....+.+|+.+.|.|.+. |.|.+.|+++++..+... .++.+...+ +|.|.+++.+|+|.|+|.|
T Consensus 357 ~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g--------~L~i~~v~~~D~G~Y~C~a 426 (452)
T 3zyi_A 357 DAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDG--------TLNFSHVLLSDTGVYTCMV 426 (452)
T ss_dssp BCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTS--------CEECSSCCTTCCEEEEEEE
T ss_pred cccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCC--------eEEEeecCHHHCEEEEEEE
Confidence 345667789999999999998 999999999746555432 345444444 6999999999999999999
Q ss_pred EcCCCceEEEEEEEEeccCCC
Q psy16261 81 KNTLGGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 81 ~n~~g~~~~~~~l~v~~~~~~ 101 (158)
.|..|...+.+.|.|.+.+..
T Consensus 427 ~N~~G~~~~~~~l~v~~~~~~ 447 (452)
T 3zyi_A 427 TNVAGNSNASAYLNVSTAGTH 447 (452)
T ss_dssp ECSSCEEEEEEEEEC------
T ss_pred EcCCCcEEEEEEEEEEccccc
Confidence 999999999999988776543
No 188
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.30 E-value=1.3e-11 Score=84.65 Aligned_cols=84 Identities=18% Similarity=0.299 Sum_probs=55.3
Q ss_pred CceEEEecCCCEEEEeEEeecCCCe---eEEEcCCCeeeec---------------CCeEEEEEee--cccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPI---TFWTHENGSLIHE---------------GSRYHMWTEK--FSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~---i~W~~~~~~~~~~---------------~~~~~~~~~~--~~~~~~~~~l~i 65 (158)
+..+.+.+|+++.|.|.+.+.+.+. +.|+|+++..+.. ..+....... .......++|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 3457789999999999999887764 7899984433211 0111111000 000111236999
Q ss_pred cCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 66 GSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.+++.+|+|.|.|.+.|..+....
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~ 111 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRR 111 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCccee
Confidence 999999999999999998775543
No 189
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.30 E-value=4.3e-11 Score=80.60 Aligned_cols=81 Identities=25% Similarity=0.360 Sum_probs=63.0
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCC-Ceeeec-----CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHEN-GSLIHE-----GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+.+|+.+.|.|.+.+.|.|.+.|++++ +..+.. ..++...... ..+.|.|.++..+|.|.|+|.|.|.
T Consensus 105 ~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~ 179 (192)
T 2va4_A 105 TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH-----GSSSLHIKDVKLSDSGRYDCEAASR 179 (192)
T ss_dssp EECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET-----TEEEEEEESCCGGGCEEEEEEEECS
T ss_pred eEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc-----CceEEEEecCCcccCEEEEEEEEec
Confidence 4667999999999999999999999982 222322 2344444322 1247999999999999999999999
Q ss_pred CCceEEEEEEEE
Q psy16261 84 LGGSEGVIKVYN 95 (158)
Q Consensus 84 ~g~~~~~~~l~v 95 (158)
.|.....+.|.|
T Consensus 180 ~g~~~~~~~l~V 191 (192)
T 2va4_A 180 IGGHQKSMYLDI 191 (192)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCceEEEEEEEe
Confidence 999888888876
No 190
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.30 E-value=3.2e-12 Score=93.76 Aligned_cols=86 Identities=17% Similarity=0.204 Sum_probs=68.0
Q ss_pred eecCceEEEecCCCEEEEeEEe-------ecCCCeeEEEcCCCee--eecC--CeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVE-------SYPKPITFWTHENGSL--IHEG--SRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~-------g~p~p~i~W~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
...+..+.+.+|+.+.|.|.+. +.|.+.+.|+++ +.. +... .++.. ... .|.|.+++.+
T Consensus 22 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~-~~~--------~L~i~~v~~~ 91 (339)
T 3o4o_C 22 GRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKN-DSARTVPGEEETRMWA-QDG--------ALWLLPALQE 91 (339)
T ss_dssp EECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEES-SCCSCCSCCSSSCEEE-ETT--------EEEESSBCTT
T ss_pred CcCceEEEEECCccEEEEeccccccccccCCCCceEEEEEC-CCCcccCccccccEEe-eCC--------eEEECCCCcc
Confidence 3456777899999999999998 889999999999 654 2222 23332 222 6999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 72 DFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
|+|.|+|.+.|..|.....+.|.|...
T Consensus 92 D~G~Y~C~~~n~~g~~~~~~~l~V~~~ 118 (339)
T 3o4o_C 92 DSGTYVCTTRNASYCDKMSIELRVFEN 118 (339)
T ss_dssp CCEEEECCEEETTEEEEEEEEEEEECS
T ss_pred cCEEEEEEEECCcceEEEEEEEEEEcC
Confidence 999999999999988877887777654
No 191
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.30 E-value=5e-11 Score=73.93 Aligned_cols=78 Identities=23% Similarity=0.363 Sum_probs=57.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
+..+|..+.+.+|+++.|.|.+.+.|.+.+.|++.. +. .+. ...|+.+.... ...+|.|.++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSG-----TDFTLTISSL 78 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESS-----SEEEEEECSC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecC-----CEEEEEECCC
Confidence 345567778999999999999999988999999862 11 111 12455544321 1247999999
Q ss_pred CCCCCeEEEEEEEcCC
Q psy16261 69 SKSDFGTYKCNAKNTL 84 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~ 84 (158)
+.+|+|.|.|.+.|..
T Consensus 79 ~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 79 EPEDFAMYICQQHNEY 94 (108)
T ss_dssp CTTCCSEEEEEECSSS
T ss_pred CHHHCEEEEEEEccCC
Confidence 9999999999999874
No 192
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.30 E-value=1.4e-11 Score=83.72 Aligned_cols=84 Identities=19% Similarity=0.192 Sum_probs=63.6
Q ss_pred CceEEEecCCCEEEEeEEe--ecCCCeeEEEc--CCCeee----------ecCCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVE--SYPKPITFWTH--ENGSLI----------HEGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~--g~p~p~i~W~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
.+.+...+|+.+.|.|... +.+.+.+.|++ + +..+ ....|+.+...+ +|.|.+++.+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~-~~~i~~~~~~~~~~~~~~R~~~~~ng--------sL~I~~v~~~ 76 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSD-KKKIAQFRKEKETFKEKDTYKLFKNG--------TLKIKHLKTD 76 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGG-CCEEEEECGGGCEEESCTTEEECTTS--------CEEECSCCGG
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCC-CcEEEEEeCccCCCCCCCeEEECCCC--------CEEECCCChh
Confidence 4567788999999999553 35567999999 7 5554 234566665444 7999999999
Q ss_pred CCeEEEEEEEcCCCceE--EEEEEEEecc
Q psy16261 72 DFGTYKCNAKNTLGGSE--GVIKVYNIGY 98 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~--~~~~l~v~~~ 98 (158)
|+|.|+|.+.|..|... ..+.|.|...
T Consensus 77 DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 77 DQDIYKVSIYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp GCEEEEEEEEETTSCEEEEEEEEEEEECC
T ss_pred hCEEEEEEEEeCCCceeEEEEEEEEEcCc
Confidence 99999999999988763 4566766653
No 193
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.29 E-value=9.2e-11 Score=75.84 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=66.0
Q ss_pred eecCceEEEecCCCEEEEeEEeecCC---CeeEEEcCCCe-ee--e-------------cCCeEEEEEeecccceEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPK---PITFWTHENGS-LI--H-------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~---p~i~W~~~~~~-~~--~-------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..++..+.+.+|+++.|.|.+.+.+. +.+.|++++.. .+ . ...|+.+.... ......+|
T Consensus 10 ~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~sL 87 (139)
T 1pko_A 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKES--IGEGKVAL 87 (139)
T ss_dssp ECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTT--GGGTEEEE
T ss_pred ECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEcccc--ccCCeEEE
Confidence 34566788999999999999987553 68999998321 11 0 01344433210 01113479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
.|.+++.+|+|.|.|.+.|..|.....+.|.|..+
T Consensus 88 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 88 RIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDP 122 (139)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred EEccCCHHHCEEEEEEEEcCCCceEEEEEEEEecC
Confidence 99999999999999999999887788888888743
No 194
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.29 E-value=1.3e-10 Score=83.82 Aligned_cols=76 Identities=14% Similarity=0.245 Sum_probs=60.7
Q ss_pred eEEEecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 8 LIGARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
...+.+|+.+.|.|.+. +.|.+.+.|+++ +..+....++.+....... ...|.|.+++.+|+|.|+|.+.|..+.
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~i~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 191 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNTG---IIEMFMEKLQDEDEGTYTFQLQDGKAT 191 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEET-TEEECSSSSCEEEEETTTT---EEEEEESCCCGGGCEEEEEEEESSSCE
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEEC-CEECeeCCcEEEEEccCCC---EEEEEEccCCcccCEeEEEEEEeCCce
Confidence 56688999999999999 899999999999 8888777766665442111 246999999999999999999875444
Q ss_pred e
Q psy16261 87 S 87 (158)
Q Consensus 87 ~ 87 (158)
.
T Consensus 192 ~ 192 (312)
T 2y23_A 192 N 192 (312)
T ss_dssp E
T ss_pred E
Confidence 3
No 195
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.28 E-value=3.5e-11 Score=82.66 Aligned_cols=91 Identities=19% Similarity=0.248 Sum_probs=64.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC--Ce--eee-c--------CCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN--GS--LIH-E--------GSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--~~--~~~-~--------~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|+..+..+.+.+|+.+.|.|.+.+.|.+.+.|++++ .. .+. . ..|+.+.... ..++|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (213)
T 3nl4_L 4 MTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG-----TDFTLTISDL 78 (213)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEECSC
T ss_pred EEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC-----CEEEEEECCC
Confidence 445577788999999999999999999999999841 11 111 1 2456555322 1247999999
Q ss_pred CCCCCeEEEEEEEcCCCc---eEEEEEEEEec
Q psy16261 69 SKSDFGTYKCNAKNTLGG---SEGVIKVYNIG 97 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 97 (158)
+.+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 79 ECADAATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp CGGGCEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred ChHHCEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 999999999999998763 23344555544
No 196
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.28 E-value=7.3e-12 Score=87.85 Aligned_cols=87 Identities=11% Similarity=0.197 Sum_probs=57.6
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC--eEEEEEe-----------ecccce---EEEEEEEcCCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS--RYHMWTE-----------KFSSYK---FYMRLYIGSLSK 70 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~-----------~~~~~~---~~~~l~i~~v~~ 70 (158)
..+.+.+|+.+.|.|.+.+.|.|.+.|+++ +..+.... ....... ...... ....|.|.+++.
T Consensus 144 ~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 222 (250)
T 2fbo_J 144 EVVQVDEGNDITMTCPCTDCANANVTWYTG-PTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKI 222 (250)
T ss_dssp SEEECCTTCCEEECCCEESCTTCEEEEEEE-EECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCG
T ss_pred ceEEecCCCcEEEEEEecCCCCCeeEEEeC-CCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCc
Confidence 345566799999999999999999999999 66554321 1000000 000000 013799999999
Q ss_pred CCCeEEEEEEEcCCC---ceEEEEEEE
Q psy16261 71 SDFGTYKCNAKNTLG---GSEGVIKVY 94 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g---~~~~~~~l~ 94 (158)
+|+|.|+|.|.|.+| .....+.|.
T Consensus 223 ~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 223 TDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp GGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred ccCEEEEEEecCCccccCccceeEEEe
Confidence 999999999999555 444455543
No 197
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.28 E-value=5.5e-11 Score=81.66 Aligned_cols=91 Identities=15% Similarity=0.222 Sum_probs=65.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC--Cee--ee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN--GSL--IH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--~~~--~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|+.++ .+.+.+|+.+.|.|.+.+.|.+.+.|++.. ... +. ...|+.+.... ..++|.|.++
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 77 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSG-----NMATLTISKA 77 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET-----TEEEEEESSC
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecC-----CEEEEEECCC
Confidence 34456 788999999999999999999999999831 111 11 22455544322 1347999999
Q ss_pred CCCCCeEEEEEEEcCCC---ceEEEEEEEEecc
Q psy16261 69 SKSDFGTYKCNAKNTLG---GSEGVIKVYNIGY 98 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g---~~~~~~~l~v~~~ 98 (158)
+.+|+|.|.|.+.|..+ .....+.|.|...
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 110 (213)
T 3mj8_L 78 QAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQ 110 (213)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEBCCEEEEEECS
T ss_pred ChhhCEEEEEEeccCCcceeEEcCceEEEEeCC
Confidence 99999999999999988 3344567777643
No 198
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.28 E-value=2.1e-11 Score=78.72 Aligned_cols=90 Identities=16% Similarity=0.246 Sum_probs=63.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---e-eecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---L-IHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~-~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
|...+..+.+.+|+.+.|.|.+.+. +.+.|+++. +. . +....|+.+...+ . ..+|.|.+++.+|+|.|
T Consensus 20 v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~-~----~~~L~I~~~~~~DsG~Y 92 (133)
T 3khq_A 20 IWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNG-S----VYTLTIQNIQYEDNGIY 92 (133)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEET-T----EEEEEECSCCGGGCEEE
T ss_pred eEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCC-C----EEEEEECCCChHHCEEE
Confidence 3445677789999999999999987 899999872 11 1 1234677665433 1 24799999999999999
Q ss_pred EEEEEcCCCc----eEEEEEEEEecc
Q psy16261 77 KCNAKNTLGG----SEGVIKVYNIGY 98 (158)
Q Consensus 77 ~C~a~n~~g~----~~~~~~l~v~~~ 98 (158)
.|.+.|..|. ....+.|.|...
T Consensus 93 ~C~a~n~~g~~~~~~g~gt~L~V~~~ 118 (133)
T 3khq_A 93 FCKQKCDSANHNVTDSCGTELLVLGF 118 (133)
T ss_dssp EEEESSCC-------CCCEEEEEC--
T ss_pred EEEEEeCCCCcceeECCCEEEEEEec
Confidence 9999998763 233467777663
No 199
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.28 E-value=8.8e-12 Score=85.21 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=63.4
Q ss_pred EecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE-
Q psy16261 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG- 89 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~- 89 (158)
+.+|+.+.|.|.+.+.| |.+.|+++ +..+....++.+.... +.|.|.++..+|+|.|+|.|.|..|....
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~-g~~l~~~~~~~~~~~~-------~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~ 192 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFN-SQSLQLTERMTLSQNN-------SILRIDPIKREDAGEYQCEISNPVSVRRSN 192 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEET-TEECCCCSSEEEETTT-------TEEEESSCCGGGCEEEEEEEECTTCCEECC
T ss_pred EeeCCCEEEEEECCCCC-CceEEEEC-CEeCCCCCCeEEcCCC-------CEEEEeccCHHhCeEEEEEEecCCCcccCC
Confidence 56799999999999976 89999999 8888777776655432 27999999999999999999999998744
Q ss_pred EEEEEEeccC
Q psy16261 90 VIKVYNIGYF 99 (158)
Q Consensus 90 ~~~l~v~~~~ 99 (158)
.+.|.|...+
T Consensus 193 ~~~l~v~~~~ 202 (208)
T 3r4d_A 193 SIKLDIIFDP 202 (208)
T ss_dssp CEEECCC---
T ss_pred ceeeeEEeCC
Confidence 5666655543
No 200
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.27 E-value=2.3e-11 Score=82.47 Aligned_cols=78 Identities=15% Similarity=0.310 Sum_probs=62.2
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+....+.+|+.+.|.|.+.|.|.| .+.|+++ +..+...... .. .+.|.|.+++ |+|.|+|.|.|.
T Consensus 112 ~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~-~~~~~~~~~~--~~--------~~~L~i~~~~--d~G~Y~C~a~N~ 178 (195)
T 2c5d_C 112 EPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQD-AVPLATAPGH--GP--------QRSLHVPGLN--KTSSFSCEAHNA 178 (195)
T ss_dssp CCCCEEECTTCCEEEEEEEECSSCCCEEEEEES-SCBSSSSTTS--SC--------CEEEEECCCS--SCEEEEEEEEET
T ss_pred CCCcEEEcCCCEEEEEeECCCCCCCCEEEEEEC-CEeccCCCCc--CC--------CCeEEEcccc--cCceEEEEEEcC
Confidence 3445668889999999999999999 9999999 7666544322 11 2369999987 789999999999
Q ss_pred CCceE-EEEEEEE
Q psy16261 84 LGGSE-GVIKVYN 95 (158)
Q Consensus 84 ~g~~~-~~~~l~v 95 (158)
.|... ..+.|.|
T Consensus 179 ~g~~~s~~~~l~V 191 (195)
T 2c5d_C 179 KGVTTSRTATITV 191 (195)
T ss_dssp TEEEECCCEEEEE
T ss_pred CCceEEEEEEEEE
Confidence 99885 6788877
No 201
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.27 E-value=2.3e-12 Score=88.11 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=60.0
Q ss_pred EecCCCEEEEeEE-eecCCCeeEEEcCC-CeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 11 ARLAAPLTLDCHV-ESYPKPITFWTHEN-GSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 11 ~~~g~~v~l~C~~-~g~p~p~i~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+|+.+.|.|.+ .+.|.|.+.|++++ +..+.....+ .... ..|.|.+++.+|+|.|+|.|.|..|...
T Consensus 133 ~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~-~~~~--------~~L~i~~~~~~d~G~Y~C~a~N~~g~~~ 203 (214)
T 3jz7_A 133 EEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA-EMTS--------PVISVKNASSEYSGTYSCTVQNRVGSDQ 203 (214)
T ss_dssp CBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG-GTTS--------SEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred eecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee-ccCC--------CEEEEecCCHHHCEEEEEEEEcCCCcEE
Confidence 5679999999999 89999999999962 2222221111 0011 1699999999999999999999999998
Q ss_pred EEEEEEEec
Q psy16261 89 GVIKVYNIG 97 (158)
Q Consensus 89 ~~~~l~v~~ 97 (158)
..+.|.|..
T Consensus 204 ~~~~l~V~~ 212 (214)
T 3jz7_A 204 CMLRLDVVP 212 (214)
T ss_dssp EEEEECCBC
T ss_pred EEEEEEEeC
Confidence 888887764
No 202
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.27 E-value=3.2e-11 Score=83.26 Aligned_cols=87 Identities=17% Similarity=0.261 Sum_probs=62.9
Q ss_pred EEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 10 GARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 10 ~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
.+.+|+.+.|.|.+ .+.|.|.+.|+++++..+.............+.+ +.|.|.++..+|.|.|+|.|.|..|...
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 197 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLF---DVHSVLRVVLGANGTYSCLVRNPVLQQD 197 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCE---EEEEEEEEECCTTCEEEEEEEETTTTEE
T ss_pred eecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeE---EEEEEEEEEeCCCCEEEEEEECCCCCCc
Confidence 46689999999999 8899999999995465554322222222221222 3578999999999999999999999999
Q ss_pred EEEEEEEeccC
Q psy16261 89 GVIKVYNIGYF 99 (158)
Q Consensus 89 ~~~~l~v~~~~ 99 (158)
..+.|.|...|
T Consensus 198 ~~~~l~V~~~p 208 (222)
T 4i0k_A 198 AHGSVTITGQP 208 (222)
T ss_dssp EEEEEECCC--
T ss_pred eEEEEEEeCCc
Confidence 99999887765
No 203
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.27 E-value=4.7e-11 Score=87.52 Aligned_cols=78 Identities=17% Similarity=0.180 Sum_probs=60.1
Q ss_pred EecCCCEEEEeEEeecC-CCeeEEEcCCCeeee-cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC--CCc
Q psy16261 11 ARLAAPLTLDCHVESYP-KPITFWTHENGSLIH-EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT--LGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p-~p~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~--~g~ 86 (158)
+.+|+.+.|.|.+.|.| .|.+.|+++ +..+. ...++... .. .|.|.+++.+|+|.|+|.|.|. .|.
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k~-~~~l~~~~~~~~~~-~~--------~L~I~~v~~~D~G~Y~C~a~n~~~~g~ 209 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYKN-NQELIIDGTKYSQS-GQ--------NLIIHNPELEDSGRYDCYVHYDDVRIK 209 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEET-TEECCCSSSSEEEE-TT--------EEEECSCCGGGCEEEEEEEEECCTTSS
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEEC-CccCCCCCceEecC-CC--------EEEEeecChhhCEEEEEEEEecccCCC
Confidence 34699999999999999 899999999 76664 33455444 33 7999999999999999999997 665
Q ss_pred eEEE----EEEEEecc
Q psy16261 87 SEGV----IKVYNIGY 98 (158)
Q Consensus 87 ~~~~----~~l~v~~~ 98 (158)
.... +.|.|...
T Consensus 210 ~~~~~s~~~~l~V~~~ 225 (329)
T 3oq3_B 210 NDIVVSRCKILTVIPS 225 (329)
T ss_dssp SCEEEEEEEEEEEECC
T ss_pred ceeEEEeeEEEEEECC
Confidence 4333 55666543
No 204
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.27 E-value=2.9e-11 Score=75.56 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=60.7
Q ss_pred CceEEEecCCCEEEEeEE-eecCCCe----eEEEcCCCee----e---------ecCCeEEEEEeecccceEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHV-ESYPKPI----TFWTHENGSL----I---------HEGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~-~g~p~p~----i~W~~~~~~~----~---------~~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
+..+.+.+|+++.|.|.+ .+.+.+. +.|++. +.. + ....|+.+............+|.|.+
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH-GESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEET-TCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECS
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEc-CCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEee
Confidence 334789999999999999 4444444 899987 321 1 01223333221000000023799999
Q ss_pred CCCCCCeEEEEEEEc-CCCceEEEEEEEEecc
Q psy16261 68 LSKSDFGTYKCNAKN-TLGGSEGVIKVYNIGY 98 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~ 98 (158)
++.+|+|.|.|.+.+ ..|.....+.|.|...
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~ 117 (118)
T 3udw_C 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK 117 (118)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred cChHHCeEEEEEEEECCCCCccceEEEEEEeC
Confidence 999999999999999 7777777888887654
No 205
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.27 E-value=8.7e-12 Score=84.60 Aligned_cols=68 Identities=18% Similarity=0.289 Sum_probs=53.4
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcC-CCCCCCeEEEEEEEcCCCceE
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGS-LSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
....|+.+.|.|.+.+ +. .+.|+|+ +..+.... .. .|.|.+ ++.+|+|.|+|.|.|..|...
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~-g~~l~~~~------~~--------~L~I~~~~~~~D~G~Y~C~a~n~~g~~~ 72 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKN-GQELPQKH------DK--------HLVLQDFSEVEDSGYYVCYTPASNKNTY 72 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEET-TEEECSCC------CS--------EEEEESCCTTTSCEEEEEECSSCCCCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEEC-CEECCCCC------CC--------EEEECCCCccccCEEEEEEEEeCCCcEE
Confidence 3578999999999988 44 4999999 77765431 11 699999 999999999999999988755
Q ss_pred EEEEEE
Q psy16261 89 GVIKVY 94 (158)
Q Consensus 89 ~~~~l~ 94 (158)
..+.+.
T Consensus 73 ~~~~~~ 78 (186)
T 1jbj_A 73 LYLKAR 78 (186)
T ss_dssp EEECCC
T ss_pred EEEEEE
Confidence 444443
No 206
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=83.97 Aligned_cols=86 Identities=19% Similarity=0.138 Sum_probs=59.1
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+.. .+.+|+++.|.|.+.+.|. .+.|+|+ +..+....+. ... ....+.|.|.+++.+|+|.|+|.+.|
T Consensus 9 ~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~--~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 9 WAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKE-GSPEPWDTQN--PLE----PKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp EEESCS-EEETTCCEEEEEECCTTCC-EEEEEET-TCSSCSEEEC--CCS----STTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEEC-CCCCCccccc--ccC----CccccEEEeccCChhHCeEEEEEEeC
Confidence 344443 5889999999999988765 9999999 6544321100 000 01124799999999999999999999
Q ss_pred CCCce--EEEEEEEEec
Q psy16261 83 TLGGS--EGVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~--~~~~~l~v~~ 97 (158)
..|.. +..+.|.|..
T Consensus 80 ~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTG 96 (196)
T ss_dssp TTEECBCCCCEEEEEEC
T ss_pred CCCcCCcCccEEEEecC
Confidence 87643 3345566554
No 207
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.27 E-value=4.3e-11 Score=87.26 Aligned_cols=138 Identities=9% Similarity=0.049 Sum_probs=87.2
Q ss_pred CceEEEecC---CCEEEEeE-EeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 6 SQLIGARLA---APLTLDCH-VESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 6 ~~~~~~~~g---~~v~l~C~-~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+..+.+.+| +.+.|.|. +.+.|.|.+.|+++ ....... .........+...+.|.|..+...|.|.|+|.|.
T Consensus 139 ~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~-~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 214 (331)
T 3u83_A 139 QAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR-LKGEAEY---QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214 (331)
T ss_dssp SSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES-SCCEEEE---EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred CCceeecCCCccceEEEEEEecCCcCCceEEEEcC-CCCcccc---ceeECCCCcEEEEEEEEEEeccccCCCEEEEEEe
Confidence 344556778 67999998 88999999999986 2211110 1111111233344579999999999999999999
Q ss_pred cCCCceEEEEEEEEeccCC------C-------------------CCcc-c-----------------chhhhh-hhccc
Q psy16261 82 NTLGGSEGVIKVYNIGYFG------S-------------------DTQY-V-----------------TDEEMQ-RTNQI 117 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~------~-------------------~~~~-~-----------------~~~~~~-~~~~~ 117 (158)
|..|.....+.|.|...|. . +... + ..+.+. .....
T Consensus 215 n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~ 294 (331)
T 3u83_A 215 YHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYS 294 (331)
T ss_dssp ETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGG
T ss_pred cCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCccc
Confidence 9988877776665543210 0 0000 0 011222 23444
Q ss_pred ccccccCcccceEeeeccCCceEEEEccccCCCCCCC
Q psy16261 118 ARSKWGSERTNQIARSKWGSGYRYTSGPIRLPDPSGD 154 (158)
Q Consensus 118 ~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (158)
+.|.| .|.+.|..|....+..|.|...++.
T Consensus 295 d~G~Y-------~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 295 LAGTY-------ICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp GCEEE-------EEEEEETTEEEEEEEEECCBC----
T ss_pred cCeEE-------EEEEEeccccceEEEEEEEeccchh
Confidence 55666 9999999999999999998766543
No 208
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.27 E-value=3.7e-12 Score=92.26 Aligned_cols=130 Identities=9% Similarity=-0.032 Sum_probs=82.1
Q ss_pred ecCCCEEEEeEE-eecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE-
Q psy16261 12 RLAAPLTLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG- 89 (158)
Q Consensus 12 ~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~- 89 (158)
..|+.+.|.|.+ .|.|.|.+.|+++ +..+..... ..........+.|.|..+...|.|.|+|.|.|..+....
T Consensus 127 ~~~~~~~l~C~~~~g~P~~~i~W~~~-~~~~~~~~~----~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 201 (308)
T 4fom_A 127 GGNETVAAICIAATGKPVAHIDWEGD-LGEMESTTT----SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR 201 (308)
T ss_dssp TCSCEEEEEEEEEEEBSCCEEEECCC-SSBCCEEEE----ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred cCCceEEEEEEecCCcCCceEEEEEC-Ccccccccc----eeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE
Confidence 357789999975 6899999999999 655432211 011112223457999999999999999999998776533
Q ss_pred -EEEEEEeccCC------C-------------------CCc-cc------------------chhhhhhhcccccccccC
Q psy16261 90 -VIKVYNIGYFG------S-------------------DTQ-YV------------------TDEEMQRTNQIARSKWGS 124 (158)
Q Consensus 90 -~~~l~v~~~~~------~-------------------~~~-~~------------------~~~~~~~~~~~~~~~~g~ 124 (158)
.+.|.|...|. . +.. .+ ..+.+......+.|.|
T Consensus 202 ~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y-- 279 (308)
T 4fom_A 202 YSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVY-- 279 (308)
T ss_dssp EEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEE--
T ss_pred EeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEE--
Confidence 34443322210 0 000 00 0001112233445555
Q ss_pred cccceEeeeccCCceEEEEccccCCCCCC
Q psy16261 125 ERTNQIARSKWGSGYRYTSGPIRLPDPSG 153 (158)
Q Consensus 125 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (158)
.|.|.|..|....+..|.|.+||-
T Consensus 280 -----~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 280 -----ICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp -----EEEEEETTEEEEEEEECCEECCC-
T ss_pred -----EEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999999999999999888874
No 209
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.27 E-value=1.6e-11 Score=83.81 Aligned_cols=83 Identities=12% Similarity=0.084 Sum_probs=62.0
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..+..++.+.+.|.+.+.|.|.+.|+++ +..+.....+.. ...+...+.|.|..+...|.|.|+|.|.|..|..+
T Consensus 128 ~~~~~~~~~~~~c~~~g~p~p~i~W~~~-~~~~~~~~~~~~----~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~ 202 (218)
T 4frw_A 128 LEEGQGLTLAASCTAEGSPAPSVTWDTE-VKGTTSSRSFKH----SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQD 202 (218)
T ss_dssp EETTCCSEEEEEEEEEEBSCCEEEEEES-SCCEEEEEEEEC----SSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred eeeeeccccceeeeccCCcCceEEEEEC-CcccccCceEec----CCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeE
Confidence 3455688899999999999999999999 655543322211 12233456799999999999999999999999886
Q ss_pred EEEEEEEe
Q psy16261 89 GVIKVYNI 96 (158)
Q Consensus 89 ~~~~l~v~ 96 (158)
..+++.+.
T Consensus 203 ~~~t~~v~ 210 (218)
T 4frw_A 203 QRITHILH 210 (218)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEE
Confidence 66555443
No 210
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.27 E-value=3.7e-11 Score=94.10 Aligned_cols=88 Identities=15% Similarity=0.237 Sum_probs=64.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCee----EEEc--CCCe--eeec---------CCeEEEEEeecccceEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPIT----FWTH--ENGS--LIHE---------GSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i----~W~~--~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
.+..+.+.+|+.+.|.|.+.+.|.|.+ .|++ + +. .+.. ..++.+..... ....+|.|.+
T Consensus 337 ~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~-g~~~~l~~~~~~~~~~~~~r~~~~~~~~---~g~~~L~I~~ 412 (585)
T 2ocw_A 337 SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQN-GRCPLLVDSEGWVKAQYEGRLSLLEEPG---NGTFTVILNQ 412 (585)
T ss_pred CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCC-CCCceeeeecceeecccCCCEEEeccCC---CcEEEEEECC
Confidence 345566889999999999999999977 7999 7 54 3321 23444432110 0123599999
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 68 LSKSDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
++.+|+|.|+|.| |..|.....+.|.|..
T Consensus 413 v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~ 441 (585)
T 2ocw_A 413 LTSRDAGFYWCLT-NGDTLWRTTVEIKIIE 441 (585)
T ss_pred CChhhCEEEEEcc-cCCCccceeEEEEEec
Confidence 9999999999999 9888887777777765
No 211
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.26 E-value=4.5e-11 Score=82.41 Aligned_cols=86 Identities=13% Similarity=0.209 Sum_probs=60.0
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.+.+|+.+.|.|.+.|.|.|.+.|+++++..+....+........+.+...+.|.+ ...|.|.|+|.|.|..|....
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v---~~~d~g~Y~C~a~n~~g~~~~ 203 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRI---NTTTNEIFYCTFRRLDPEENH 203 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEE---ECCTTCEEEEEEEETTTTEEE
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEE---eccCCcEEEEEEEeCccceee
Confidence 45679999999999999999999999855555433222222222123333333443 468999999999999999999
Q ss_pred EEEEEEecc
Q psy16261 90 VIKVYNIGY 98 (158)
Q Consensus 90 ~~~l~v~~~ 98 (158)
.+.|.|...
T Consensus 204 ~~~l~v~~~ 212 (222)
T 3sbw_C 204 TAELVIPEL 212 (222)
T ss_dssp EEEEECCCC
T ss_pred EEEEEecCC
Confidence 988887654
No 212
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.26 E-value=3.3e-11 Score=97.91 Aligned_cols=76 Identities=21% Similarity=0.353 Sum_probs=62.0
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.... . .|.|.+++.+|.|.|+|.+.|..
T Consensus 349 ~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~-g~~~~~~~-------~--------~L~i~~v~~~d~G~Y~C~a~n~~ 412 (816)
T 3dmk_A 349 DPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKD-GKAIGHSE-------S--------VLRIESVKKEDKGMYQCFVRNDR 412 (816)
T ss_dssp ESSEEECCTTSCEEEEEEEEEECCCEEEEEET-TEECSCCS-------S--------EEEESSCCGGGCEEEEEEEECSS
T ss_pred CCCceEecCCCCEEEEEEEeccCCCEEEEEEC-CEECCCCC-------C--------EEEEcCCCHHHCEEEEEEEECCC
Confidence 34455678899999999999999999999999 77664331 1 59999999999999999999998
Q ss_pred CceEEEEEEEEe
Q psy16261 85 GGSEGVIKVYNI 96 (158)
Q Consensus 85 g~~~~~~~l~v~ 96 (158)
|.......|.+.
T Consensus 413 g~~~~~~~l~v~ 424 (816)
T 3dmk_A 413 ESAEASAELKLG 424 (816)
T ss_dssp CEEEECCEEECC
T ss_pred CcEEEEEEEEEc
Confidence 877666655553
No 213
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.26 E-value=1.4e-11 Score=77.68 Aligned_cols=92 Identities=21% Similarity=0.296 Sum_probs=63.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCC----eeEEEcCCC------eeee--------------cCCeEEEEEeecccceE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKP----ITFWTHENG------SLIH--------------EGSRYHMWTEKFSSYKF 59 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p----~i~W~~~~~------~~~~--------------~~~~~~~~~~~~~~~~~ 59 (158)
.++..+.+.+|+.+.|.|.+.+.+.+ .+.|++.+. ..+. ...|+.+.... ....
T Consensus 10 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~ 87 (126)
T 1eaj_A 10 TPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSND--LKSG 87 (126)
T ss_dssp SSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSC--GGGT
T ss_pred CCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEccc--ccCC
Confidence 35567789999999999999887653 489998721 1110 01333333220 0001
Q ss_pred EEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 60 YMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 60 ~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
..+|.|.+++.+|+|.|.|.+.|..+.....+.|.|..
T Consensus 88 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 88 DASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 13699999999999999999999988777788887754
No 214
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.26 E-value=5.2e-11 Score=94.38 Aligned_cols=80 Identities=13% Similarity=0.269 Sum_probs=63.9
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce-E
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS-E 88 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~-~ 88 (158)
.+..|+.+.|.|.+.+ |.+.+.|+++ +..+....++.+.... +.|.|.+++.+|.|.|+|.+.|..|.. +
T Consensus 122 ~v~~g~~v~l~C~~~~-p~~~v~W~~~-g~~l~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s 192 (642)
T 1e07_A 122 PVEDKDAVAFTCEPET-QDATYLWWVN-NQSLPVSPRLQLSNGN-------RTLTLFNVTRNDTASYKCETQNPVSARRS 192 (642)
T ss_pred eEecCCcEEEEEECCC-CCeeEEEEEC-CeECCCCCceEEcCCC-------CEEEEeCCCcccCeeEEEEEecCCCCccc
Confidence 4677999999999999 8999999999 8877766666554322 379999999999999999999988764 3
Q ss_pred EEEEEEEecc
Q psy16261 89 GVIKVYNIGY 98 (158)
Q Consensus 89 ~~~~l~v~~~ 98 (158)
..+.|.|...
T Consensus 193 ~~~~l~V~~~ 202 (642)
T 1e07_A 193 DSVILNVLYG 202 (642)
T ss_pred ceEEEEEEeC
Confidence 4566666643
No 215
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.26 E-value=3.8e-11 Score=81.93 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=54.7
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCe---eEEEcCCCeeeecC------------------CeEEEEEeecccceEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPI---TFWTHENGSLIHEG------------------SRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~---i~W~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l 63 (158)
.+..+.+.+|+.+.|.|.+.+.|.+. +.|+|+ +..+... .|+...... .....++|
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~sL 81 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARV-DAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPP--RNPLDGSV 81 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEE-CSSSCEEEEEEEETTTEEEECGGGTTTEECCSSC--CCTTBCCE
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEEC-CCCCCceeEEEecCCCCeEeCccccceEEEeccc--ccCCeEEE
Confidence 35567899999999999999988764 889987 4322111 111111000 00012369
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.|.+++.+|+|.|.|.+.+..+....
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~ 107 (218)
T 4frw_A 82 LLRNAVQADEGEYECRVSTFPAGSFQ 107 (218)
T ss_dssp EESSCCGGGCEEEEEEEEEETTEEEE
T ss_pred EEeeccHHHCCceeEEEEeccCceee
Confidence 99999999999999999987665533
No 216
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.25 E-value=6.9e-12 Score=83.28 Aligned_cols=71 Identities=23% Similarity=0.376 Sum_probs=55.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-KPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+..+.+.+|+.+.|.|.+.+.| .+.+.|+++ +..+..... .+.+.+++.+|+|.|+|.+
T Consensus 7 i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~-g~~~~~~~~---------------~~~~~~~~~~d~G~Y~C~~ 70 (170)
T 3ry4_A 7 LKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHN-GNLIPTHTQ---------------PSYRFKANNNDSGEYTCQT 70 (170)
T ss_dssp EEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEET-TEECTTCCS---------------SEEEEECCGGGCEEEEEEE
T ss_pred EEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEEC-CeEcccCcc---------------ceEEEecccccCeEEEEEE
Confidence 44556666788999999999999987 579999999 776654321 3667789999999999999
Q ss_pred EcCCCceE
Q psy16261 81 KNTLGGSE 88 (158)
Q Consensus 81 ~n~~g~~~ 88 (158)
.|......
T Consensus 71 ~~~~~s~~ 78 (170)
T 3ry4_A 71 GQTSLSDP 78 (170)
T ss_dssp TTSBCCCC
T ss_pred eCCCceEe
Confidence 98655443
No 217
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.25 E-value=7.4e-11 Score=92.40 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=66.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC---eeEEEcCCCee-----ee---------cCCeEEEEEeecccceEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP---ITFWTHENGSL-----IH---------EGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
.|+.+.+.+|+.+.|.|.+.+.|.+ .+.|+|+ +.. +. ...|+.+..... .....|.|.+
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~g~~~L~I~~ 81 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQ-GARGGCITLISSEGYVSSKYAGRANLTNFPE---NGTFVVNIAQ 81 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeC-CCCCCceEEEECCCcccceeeceEEEEecCC---CCEEEEEECC
Confidence 4667789999999999999998755 8899998 432 11 123444433100 1124699999
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEEeccC
Q psy16261 68 LSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
++.+|+|.|+|.+.|..+.....+.|.|...+
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p 113 (585)
T 2ocw_A 82 LSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 113 (585)
T ss_pred CCcccCEEEEEEcccCCCCceEEEEEEEecCc
Confidence 99999999999999998887777777776543
No 218
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.24 E-value=6.4e-11 Score=79.32 Aligned_cols=76 Identities=18% Similarity=0.310 Sum_probs=59.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+....+.+|+.+.|.|.+.|.|.| .+.|+++ +..+..... .. +.|.|.++ .|+|.|+|.|.|.
T Consensus 104 ~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~-~~~~~~~~~----~~--------~~L~i~~~--~d~G~Y~C~a~N~ 168 (182)
T 1rhf_A 104 EPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRG-TTKIGGPAP----SP--------SVLNVTGV--TQSTMFSCEAHNL 168 (182)
T ss_dssp CCCCEEECTTCCEEEEEEEECSSSCCEEEEEET-TEECSCSEE----SS--------EEEEECCC--SSCEEEEEEEEET
T ss_pred cCcceEecCCCEEEEEeEecCCCCCCEEEEEcC-CeECCCCCC----Cc--------eEEEEecc--ccCeEEEEEEECC
Confidence 3455668899999999999999999 9999999 766543311 11 36999988 5899999999999
Q ss_pred CCceEE-EEEEEE
Q psy16261 84 LGGSEG-VIKVYN 95 (158)
Q Consensus 84 ~g~~~~-~~~l~v 95 (158)
.|.... .+.|.|
T Consensus 169 ~g~~~s~~~~l~V 181 (182)
T 1rhf_A 169 KGLASSRTATVHL 181 (182)
T ss_dssp TEEEECCCEEEEE
T ss_pred CCCcccceEEEEe
Confidence 998753 666655
No 219
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.24 E-value=1.6e-11 Score=85.45 Aligned_cols=87 Identities=11% Similarity=0.054 Sum_probs=58.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEE--EEEEcCCCCCCCeEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM--RLYIGSLSKSDFGTYKCN 79 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~v~~~d~G~Y~C~ 79 (158)
|...+. ..+.+|+++.|.|.+.+ +.+.+.|+|+ +..+....+. ..... ... .|.|.+++.+|+|.|+|.
T Consensus 12 i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~-g~~~~~~~~~-~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 82 (218)
T 1uct_A 12 ISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMII-KNSTYREIGR-RLKFW-----NETDPEFVIDHMDANKAGRYQCQ 82 (218)
T ss_dssp EEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEE-ETTEEEECSE-ECC---------CCCEEEECSCCGGGCEEEEEE
T ss_pred EEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEEC-CCcccccccc-cCCCC-----cceeeEEEEcccccccCEEEEEE
Confidence 344454 35889999999999987 6789999999 6544322110 00000 112 699999999999999999
Q ss_pred EEcCCCce--EEEEEEEEec
Q psy16261 80 AKNTLGGS--EGVIKVYNIG 97 (158)
Q Consensus 80 a~n~~g~~--~~~~~l~v~~ 97 (158)
+.|..|.. +..+.|.|..
T Consensus 83 a~n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 83 YRIGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp EEETTTEEEECCCEEEEEEC
T ss_pred EEcCCCceeecCCEEEEEcC
Confidence 99987633 2335555543
No 220
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.24 E-value=1.4e-10 Score=85.00 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=66.9
Q ss_pred cCceEEEecCCCEEEEeEEeecC---CC-eeEEEcCCCee-eecCCeEEEEEeecccceEEEEEEEcCCCCCCCe-EEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP---KP-ITFWTHENGSL-IHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG-TYKC 78 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p---~p-~i~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~Y~C 78 (158)
.+....+.+|+.+.|.|.+.|.| .| .+.|+++ +.. +..+.+.......... ...+.|.|.+++.+|+| .|+|
T Consensus 234 ~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~-g~~i~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~~Y~C 311 (329)
T 3oq3_B 234 LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENP-SGWIIGLDFGVYSILTSSGG-ITEATLYFENVTEEYIGNTYTC 311 (329)
T ss_dssp CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECT-TSCBCCBCSSEEEEEEEETT-EEEEEEEESSCCGGGTTCEEEE
T ss_pred cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEEC-CeeeeccCCceeeeecccCc-eeEeEEEEEeccHHHCCCcEEE
Confidence 34556788999999999999998 77 8899999 555 3444333222111011 23468999999999999 9999
Q ss_pred EEEcCCCceEEEEEEEE
Q psy16261 79 NAKNTLGGSEGVIKVYN 95 (158)
Q Consensus 79 ~a~n~~g~~~~~~~l~v 95 (158)
.|.|..|.....+.|.|
T Consensus 312 ~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 312 RGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEECSSCEEEEEEEEEE
T ss_pred EEEecCCceEEEEEEEe
Confidence 99999999988888765
No 221
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.23 E-value=2.2e-11 Score=90.27 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=57.7
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.+.+|+.+.|.|.+.+.|.|.+.|+++ +..+ ..... .|.|.+++.+|+|.|+|.|.|..+....
T Consensus 107 ~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~-------~~~~~--------~L~i~~v~~~d~G~Y~C~a~~~~~~~~~ 170 (363)
T 1wio_A 107 HLLQGQSLTLTLESPPGSSPSVQCRSP-RGKN-------IQGGK--------TLSVSQLELQDSGTWTCTVLQNQKKVEF 170 (363)
T ss_dssp SEESBSCEEEEEECCTTCCCCEEEECS-SSCE-------EEESS--------EEEECSBCGGGCEECEEEEEETTEEEEE
T ss_pred EEecCCCEEEEEEcCCCCCCeEEEEcC-CCcc-------cccce--------EEEEeeCChhcCCEEEEEEecCCCeEEE
Confidence 467999999999999999999999999 4332 11222 6999999999999999999998776666
Q ss_pred EEEEEEecc
Q psy16261 90 VIKVYNIGY 98 (158)
Q Consensus 90 ~~~l~v~~~ 98 (158)
.+.|.|...
T Consensus 171 ~~~l~v~~~ 179 (363)
T 1wio_A 171 KIDIVVLAF 179 (363)
T ss_dssp CCEECEECC
T ss_pred EEEEEEecC
Confidence 666655543
No 222
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.23 E-value=6.2e-12 Score=85.78 Aligned_cols=84 Identities=17% Similarity=0.155 Sum_probs=58.6
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCe--EEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSR--YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
...+.. .+.+|+.+.|.|.+.+.|. .+.|+|+ +..+....+ ...... +.|.|.+++.+|+|.|+|.+
T Consensus 9 ~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~--------~~L~i~~v~~~D~G~Y~C~a 77 (198)
T 1ugn_A 9 WAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYRE-KKTAPWITRIPQELVKK--------GQFPIPSITWEHTGRYRCYY 77 (198)
T ss_dssp EEESCS-EEETTCCEEEEEECCTTCC-CEEEEES-SSCCHHHHTSCHHHHTT--------TEEEESSCCGGGCEEEEEEE
T ss_pred eccCCC-cccCCCcEEEEEEecCCCc-EEEEEEC-CccccccccccccCCcc--------cEEEECCCCHHHCeEEEEEE
Confidence 344443 5889999999999998775 7999999 655531100 000011 26999999999999999999
Q ss_pred EcCC-C--ceEEEEEEEEec
Q psy16261 81 KNTL-G--GSEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~-g--~~~~~~~l~v~~ 97 (158)
.|.. | ..+..+.|.|..
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp EETTTEECCCCCCEEEEEEC
T ss_pred ECCCCCcccCCccEEEEEcc
Confidence 9987 5 224455666655
No 223
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.23 E-value=4.2e-11 Score=82.45 Aligned_cols=82 Identities=16% Similarity=0.140 Sum_probs=58.3
Q ss_pred EEEecCCCEEEEeEEeec-CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC-CCc
Q psy16261 9 IGARLAAPLTLDCHVESY-PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT-LGG 86 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~-~g~ 86 (158)
..+.+|+.+.|.|.+.+. |.+.+.|+++ +..+... ... +.|.|.+++.+|+|.|+|.|.|. .+.
T Consensus 98 ~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-g~~~~~~-----~~~--------~~L~i~~v~~~D~G~Y~C~a~n~~~~~ 163 (204)
T 3sgj_C 98 WVFKEEDPIHLRCHSWKNTALHKVTYLQN-GKGRKYF-----HHN--------SDFYIPKATLKDSGSYFCRGLVGSKNV 163 (204)
T ss_dssp SEEETTCCEEEEEEEGGGCCCEEEEEEET-TEEEEEE-----EEC--------CCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred eeEeCCCcEEEEEEecCCCCCceEEEEEC-CcEeecc-----cCC--------ceEEECcCCcccCEEEEEEEEeCCCce
Confidence 457799999999999766 5678999999 6654221 111 26999999999999999999994 444
Q ss_pred eEEEEEEEEeccCCCCCc
Q psy16261 87 SEGVIKVYNIGYFGSDTQ 104 (158)
Q Consensus 87 ~~~~~~l~v~~~~~~~~~ 104 (158)
.+..+.|.|.+.+..+..
T Consensus 164 ~s~~~~l~V~~~~~~P~i 181 (204)
T 3sgj_C 164 SSETVQITITQGLAVSTI 181 (204)
T ss_dssp ECCCEEEEEEC-------
T ss_pred ecCcEEEEEeCcCCCCcc
Confidence 466788888877655543
No 224
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.23 E-value=3.1e-11 Score=83.82 Aligned_cols=88 Identities=16% Similarity=0.228 Sum_probs=58.5
Q ss_pred ceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 7 QLIGARLAAPLTLDCHVES-YPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
....+.+|+.+.|.|.+.| .|.|.+.|+++++..+..... .......+.+. .+.+..++.+|.|.|+|.|.|..|
T Consensus 126 ~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~-~~~~~~~g~~~---v~s~l~v~~~d~G~YtC~a~N~~g 201 (226)
T 4f80_A 126 VDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEA-PVVADGVGLYA---VAASVIMRGSSGEGVSCTIRSSLL 201 (226)
T ss_dssp EEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEEC-CCEECTTSCEE---EEEEEEECC----CEEEEEEETTT
T ss_pred ceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCce-EEEECCCCcEE---EEEEEEechhcCcEEEEEEEeCCC
Confidence 3455778999999999998 599999999974555433221 12222212332 233445678999999999999999
Q ss_pred ceEEEEEEEEecc
Q psy16261 86 GSEGVIKVYNIGY 98 (158)
Q Consensus 86 ~~~~~~~l~v~~~ 98 (158)
.....+.|.|.++
T Consensus 202 ~~~~~~~v~v~ep 214 (226)
T 4f80_A 202 GLEKTASISIADP 214 (226)
T ss_dssp TEEEEEEECCCTT
T ss_pred CeEEEEEEEECCC
Confidence 9998888877654
No 225
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.22 E-value=5.3e-11 Score=86.96 Aligned_cols=93 Identities=20% Similarity=0.218 Sum_probs=68.5
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEc----CCCeeeecCCe--EEEEEeec-cc-ceEEEEEEEcCCCCCCCeEEEE
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTH----ENGSLIHEGSR--YHMWTEKF-SS-YKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~----~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
....+.+|+.+.|.|.+.|.|.|.+.|++ + +..+....+ +.+....+ .. ....+.|.|.+++.+|+|.|+|
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 308 (334)
T 1ry7_B 230 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVN-GSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTC 308 (334)
T ss_dssp CCEEEESSCCEEECCCCBCSSCEEEEEEECCCGG-GCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEE
T ss_pred CceEEeCCCCEEEEEEEecCCCCeEEEEECCcCC-CccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEE
Confidence 45668899999999999999999999999 5 555543322 11111100 00 0001259999999999999999
Q ss_pred EEEcCCCceEEEEEEEEeccCC
Q psy16261 79 NAKNTLGGSEGVIKVYNIGYFG 100 (158)
Q Consensus 79 ~a~n~~g~~~~~~~l~v~~~~~ 100 (158)
.|.|..|.....+.|.|...+.
T Consensus 309 ~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 309 LAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp EEEESSCCEEEEEEEEEECSCC
T ss_pred EEeCCCCeEEEEEEEEEEECCC
Confidence 9999999999999999887654
No 226
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.22 E-value=4.9e-11 Score=87.72 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=63.1
Q ss_pred CceEEEecCCCEEEEeEEeecCC-----------CeeEEEcCCCee------ee---cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPK-----------PITFWTHENGSL------IH---EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~-----------p~i~W~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
...+.+.+|+.+.|.|.+.+.|. +.+.|+++ +.. +. ...++.. ... .|.|
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~-~~~~~~~~~~~~~~~~~~~~~-~~~--------~L~i 83 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWT-RQDRDLEEPINFRLPENRISK-EKD--------VLWF 83 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEE-ESSCCCEEECCCCCGGGCEEE-ETT--------EEEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEEC-CCCCcccccccccccCceEee-cCC--------EEEE
Confidence 45567899999999999997664 89999998 521 11 1222222 122 6999
Q ss_pred cCCCCCCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 66 GSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
.+++.+|+|.|+|.|.|..+.....+.|.|...
T Consensus 84 ~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~ 116 (349)
T 4dep_C 84 RPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQK 116 (349)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred ccCChhhCEEEEEEEecCCceEEEEEEEEEecC
Confidence 999999999999999999888887777777653
No 227
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.22 E-value=1.5e-11 Score=93.43 Aligned_cols=72 Identities=11% Similarity=0.043 Sum_probs=55.6
Q ss_pred CceEEEecCCCEEEEeEEeecCCC---eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKP---ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
+....+.+|+.+.|.|.+.+.|.+ .+.|+++ +..+....... ....+.|.|.++..+|.|.|+|.|.|
T Consensus 93 ~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~-g~~l~~~~~~~--------~~~~~~L~i~~~~~~d~G~Y~C~a~n 163 (450)
T 1z7z_I 93 PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRG-EKELKREPAVG--------EPAEVTTTVLVRRDHHGANFSCRTEL 163 (450)
T ss_dssp CCCSEECTTSEEEEEEEEECCBCGGGEEEEEEET-TEEEEEEECCT--------TTEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeC-CEEeecccccc--------cccceEEEEEeeccccCceEEEEEEc
Confidence 344557889999999999999888 8999999 77664332110 11124799999999999999999999
Q ss_pred CCCc
Q psy16261 83 TLGG 86 (158)
Q Consensus 83 ~~g~ 86 (158)
..|.
T Consensus 164 ~~g~ 167 (450)
T 1z7z_I 164 DLRP 167 (450)
T ss_dssp ECGG
T ss_pred ccCC
Confidence 8774
No 228
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.22 E-value=8.5e-11 Score=74.13 Aligned_cols=87 Identities=22% Similarity=0.271 Sum_probs=61.8
Q ss_pred CceEEEecCCCEEEEeEEeec--CCCeeEEEcCCCeeeec-------------CCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESY--PKPITFWTHENGSLIHE-------------GSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
+..+.+.+|+++.|.|...+. +...+.|+++ ...+.. ..|+.+... .+|.|.+++.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~-~~~i~~~~~~~~~~~~~~~~~R~~~~~~--------~sL~I~~v~~ 80 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQ-DQLLAICNADLGWHISPSFKDRVAPGPG--------LGLTLQSLTV 80 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEET-TEEEEEEETTTEEECCGGGTTTEEECST--------TCEEECSCCG
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeC-CEEEEEEECCCCceeCccccCcEEeCCc--------eEEEEeeCCh
Confidence 445678999999999999873 3347899998 433210 234433211 2699999999
Q ss_pred CCCeEEEEEEEc-CCCceEEEEEEEEeccCCC
Q psy16261 71 SDFGTYKCNAKN-TLGGSEGVIKVYNIGYFGS 101 (158)
Q Consensus 71 ~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~~~~ 101 (158)
+|.|.|.|.+.+ ..|.....+.|.|..++..
T Consensus 81 ~D~G~Y~C~v~~~~~g~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 81 NDTGEYFCIYHTYPDGTYTGRIFLEVLESSVA 112 (117)
T ss_dssp GGCEEEEEEEEEETTCCEEEEEEEEEECC---
T ss_pred hhCEEEEEEEEECCCCCeEEEEEEEEEccCcc
Confidence 999999999754 5688888889988876543
No 229
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.22 E-value=3.8e-11 Score=76.70 Aligned_cols=92 Identities=17% Similarity=0.247 Sum_probs=62.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCC---eeEEEcCCCee-e--e-------------cCCeEEEEEeecccceEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKP---ITFWTHENGSL-I--H-------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~~-~--~-------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
|++++..+....|+++.|.|.+...+.+ .+.|+|.+... + . ...|+.+.... ......+
T Consensus 8 Vt~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~--~~~g~~s 85 (125)
T 4gos_A 8 ITVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ--VIVGNAS 85 (125)
T ss_dssp SCEEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTT--GGGTBCC
T ss_pred EEccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCC--ccCCeEE
Confidence 3455566778899999999998654433 68999873211 0 0 01233322111 1111237
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYN 95 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 95 (158)
|.|.+++.+|+|.|.|.+.|..|..++.+.|.|
T Consensus 86 L~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 86 LRLKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 999999999999999999999998888888876
No 230
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.22 E-value=4.2e-12 Score=91.97 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=63.2
Q ss_pred EEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+..|+.+.|.|.+.|.|.| .+.|+|+ +..+...... .. ...|.|.+++.+|+|.|+|.|.|.+|..
T Consensus 222 ~~~~~g~~v~l~C~~~g~P~p~~v~W~k~-~~~~~~~~~~---~~-------~~~l~i~~v~~~d~G~Y~C~A~N~~G~~ 290 (308)
T 4fom_A 222 NWFVGRKGVNLKCNADANPPPFKSVWSRL-DGQWPDGLLA---SD-------NTLHFVHPLTFNYSGVYICKVTNSLGQR 290 (308)
T ss_dssp CEETTCCSCEEECCEEEESCEEEEECCBS-SSCCCSSCBC---ST-------TEEECCSCCCSCCCSEEEEEEEETTEEE
T ss_pred eeeeccccEEEEEEEecCCCCcEEEEEEC-CeECCCcEEE---cC-------CeEEEECCCChhhCEEEEEEEEeCCCcE
Confidence 345678999999999999999 6999999 5554333111 01 1257788999999999999999999999
Q ss_pred EEEEEEEEeccCC
Q psy16261 88 EGVIKVYNIGYFG 100 (158)
Q Consensus 88 ~~~~~l~v~~~~~ 100 (158)
+..+.|.|.++|.
T Consensus 291 ~~~~~l~V~~~P~ 303 (308)
T 4fom_A 291 SDQKVIYISDPPH 303 (308)
T ss_dssp EEEEECCEECCC-
T ss_pred EEEEEEEEEcCCC
Confidence 9999999888764
No 231
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.21 E-value=1.1e-12 Score=105.54 Aligned_cols=87 Identities=20% Similarity=0.299 Sum_probs=0.0
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
....+.+|+.+.|.|.+.|.|.|.+.|+|+ +..+....++.+.... +.|.|.++..+|+|.|+|.|.|..|.
T Consensus 674 ~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~-g~~l~~~~~~~~~~~~-------~~L~I~~v~~~D~G~Y~C~a~N~~G~ 745 (772)
T 3v2a_R 674 ENQTTSIGESIEVSCTASGNPPPQIMWFKD-NETLVEDSGIVLKDGN-------RNLTIRRVRKEDEGLYTCQACSVLGC 745 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEeCCCCEEEEEEeCccCCCeEEEEEC-CeECcCCCCeEEcCCC-------cEEEECcCCHHHCEEEEEEEEeCCcc
Confidence 345577899999999999999999999999 7777665555443321 37999999999999999999999999
Q ss_pred eEEEEEEEEeccCCC
Q psy16261 87 SEGVIKVYNIGYFGS 101 (158)
Q Consensus 87 ~~~~~~l~v~~~~~~ 101 (158)
....+.|.|.+.+..
T Consensus 746 ~~~~~~l~V~~~p~~ 760 (772)
T 3v2a_R 746 AKVEAFFIIEGAQEK 760 (772)
T ss_dssp ---------------
T ss_pred eeEEEEEEEECCCCc
Confidence 999999999887643
No 232
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.21 E-value=1.6e-10 Score=81.17 Aligned_cols=92 Identities=11% Similarity=0.228 Sum_probs=64.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC---------------CeeeecC---CeEEEEEeecccceEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN---------------GSLIHEG---SRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~---------------~~~~~~~---~~~~~~~~~~~~~~~~~~l 63 (158)
|+.++..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +...... .|+.+..... ..++|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L 79 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASL----TLSTL 79 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEET----TEEEE
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCC----CEEEE
Confidence 456677788999999999999999999999999820 2212111 4555544221 13479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCc----eEEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGG----SEGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~----~~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 80 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 117 (246)
T 4dzb_B 80 TVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLE 117 (246)
T ss_dssp EECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEES
T ss_pred EECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEec
Confidence 99999999999999999976431 12345566654
No 233
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.21 E-value=3.1e-11 Score=81.84 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=57.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|...+.. .+.+|+++.|.|.+.+ +.+.+.|+|+ +..+... .... .......|.|.+++.+|+|.|+|.+
T Consensus 7 i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~-------~~~~~~~L~I~~v~~~D~G~Y~C~~ 76 (188)
T 1oll_A 7 IWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFE-GSLFAVDRPKPP-------ERINKVKFYIPDMNSRMAGQYSCIY 76 (188)
T ss_dssp EEEESCS-EEETTCCEEEEEECCT-TCCEEEEEET-TEEEEEECCSSC-------TTCCEEEEEESSCCGGGCEEEEEEE
T ss_pred EEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEEC-CCcccccccccC-------CCcceeEEEeCcCCcccCeEEEEEe
Confidence 3444554 5889999999999976 4568899999 6654321 0000 0011247999999999999999999
Q ss_pred EcCCCce--EEEEEEEEe
Q psy16261 81 KNTLGGS--EGVIKVYNI 96 (158)
Q Consensus 81 ~n~~g~~--~~~~~l~v~ 96 (158)
.|..+.. +..+.|.|.
T Consensus 77 ~~~~~~~~~s~~~~l~V~ 94 (188)
T 1oll_A 77 RVGELWSEPSNLLDLVVT 94 (188)
T ss_dssp EETTEECCCCCCEEEEEE
T ss_pred cCCCCCCCCCCceEEEec
Confidence 9865432 334555554
No 234
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.21 E-value=1.6e-10 Score=81.46 Aligned_cols=77 Identities=19% Similarity=0.135 Sum_probs=61.3
Q ss_pred eEEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 8 LIGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
...+.+|+.+.|.|.+ .+.|.+.+.|+++ +..+... ... +.|.|.+++.+|.|.|+|.+.|..+.
T Consensus 91 ~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~-g~~~~~~-----~~~--------~~l~i~~~~~~d~G~Y~C~~~n~~~~ 156 (262)
T 3rjd_A 91 SRVFTEGEPLALRCHAWKDKLVYNVLYYRN-GKAFKFF-----HWN--------SNLTILKTNISHNGTYHCSGMGKHRY 156 (262)
T ss_dssp CSEEETTSCEEEEEEEGGGCCCEEEEEEET-TEEEEEE-----EEC--------CCEEESSCCGGGCEEEEEEEESSSEE
T ss_pred CeEEecCCeEEEEEEccCCCCCceEEEEEC-Ccccccc-----CCC--------CeEEEEECChhhCEEEEEEEeCCCCc
Confidence 3457799999999999 7778889999999 7665321 111 26999999999999999999999887
Q ss_pred eEEEEEEEEecc
Q psy16261 87 SEGVIKVYNIGY 98 (158)
Q Consensus 87 ~~~~~~l~v~~~ 98 (158)
....+.|.|...
T Consensus 157 ~~~~~~l~V~~~ 168 (262)
T 3rjd_A 157 TSAGISVTVKEL 168 (262)
T ss_dssp EEECEEEEEECS
T ss_pred cccceEEEeccC
Confidence 777777777753
No 235
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.20 E-value=1.1e-10 Score=80.05 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=64.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee----------e--cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI----------H--EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~----------~--~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++ +..+ . ...++...... ..+.|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG-----TDFTLSINSV 78 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-----TEEEEEESSC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC-----CEEEEEECCC
Confidence 345577788999999999999999999999998752 1111 1 11455554322 1247999999
Q ss_pred CCCCCeEEEEEEEcCCCceEE-EEEEEEec
Q psy16261 69 SKSDFGTYKCNAKNTLGGSEG-VIKVYNIG 97 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~ 97 (158)
+.+|+|.|+|.+.|..+.... .+.|.|..
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 79 ETEDFGMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred ChhhCEEEEEeeecCCcceeCCCEEEEEec
Confidence 999999999999998775422 23555543
No 236
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.20 E-value=3.6e-11 Score=87.66 Aligned_cols=77 Identities=22% Similarity=0.402 Sum_probs=62.6
Q ss_pred EecCCCEEEEeEEeecCCCe-eEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEc-CCCCCCCeEEEEEEEcCCCceE
Q psy16261 11 ARLAAPLTLDCHVESYPKPI-TFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIG-SLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+|+.+.|.|.+.|.|.|. +.|+++ +..+..... . ... .|.|. ++..+|+|.|+|.|.|..|...
T Consensus 244 ~~~g~~~~l~C~~~g~p~p~~i~W~~~-~~~~~~~~~--~-~~~--------~L~i~~~v~~~d~G~Y~C~a~N~~G~~~ 311 (331)
T 3u83_A 244 YLQRMDVKLTCKADANPPATEYHWTTL-NGSLPKGVE--A-QNR--------TLFFKGPINYSLAGTYICEATNPIGTRS 311 (331)
T ss_dssp BTTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTTEE--E-ETT--------EEEECSCCCGGGCEEEEEEEEETTEEEE
T ss_pred EeCCCeEEEEEeCcCCCCCCEEEEEEC-CCcccccce--e-cCc--------EEEEeCCCccccCeEEEEEEEeccccce
Confidence 56799999999999999998 999999 665544321 1 222 69999 8999999999999999999998
Q ss_pred EEEEEEEeccC
Q psy16261 89 GVIKVYNIGYF 99 (158)
Q Consensus 89 ~~~~l~v~~~~ 99 (158)
..+.|.|....
T Consensus 312 ~~~~l~V~~~~ 322 (331)
T 3u83_A 312 GQVEVNITEAA 322 (331)
T ss_dssp EEEEECCBC--
T ss_pred EEEEEEEeccc
Confidence 88888887654
No 237
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.20 E-value=2.3e-10 Score=72.48 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=62.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---ee-e--------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LI-H--------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~-~--------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +. .+ . ...|+.+.... ...+|.|.++
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~-----~~~~L~I~~v 78 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSG-----TQFSLKINSL 78 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccC-----CEEEEEECCC
Confidence 345577788999999999999999888899999852 11 11 1 12456554321 1247999999
Q ss_pred CCCCCeEEEEEEEcCC-Cc-eEEEEEEEEecc
Q psy16261 69 SKSDFGTYKCNAKNTL-GG-SEGVIKVYNIGY 98 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~-g~-~~~~~~l~v~~~ 98 (158)
+.+|+|.|.|.+.|.. .. ....+.|.|...
T Consensus 79 ~~~DsG~Y~C~~~~~~~~~~fg~gt~L~V~~~ 110 (120)
T 1mqk_L 79 LPEDFGSYYCQHHYGTPPLTFGGGTKLEIKRE 110 (120)
T ss_dssp CGGGCEEEEEEECSSSSSCCBCCCEEEEEC--
T ss_pred CHHHCEEEEEEEEeCCCceEECCCeEEEEecC
Confidence 9999999999999853 21 223456666544
No 238
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.19 E-value=3.3e-11 Score=82.30 Aligned_cols=81 Identities=16% Similarity=0.360 Sum_probs=61.3
Q ss_pred EEecCCCEEEEeE-EeecCCCeeEEEcCCCe-eeecCCe---------EEEEEeecccceEEEEEEEcCCCCCCCeEEEE
Q psy16261 10 GARLAAPLTLDCH-VESYPKPITFWTHENGS-LIHEGSR---------YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 10 ~~~~g~~v~l~C~-~~g~p~p~i~W~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
.+.+|+.+.|.|. +.+.|.|.+.|+++ +. .+....+ +..... .+.|.|.++..+|.|.|+|
T Consensus 115 ~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~L~i~~~~~~d~G~Y~C 186 (212)
T 1f97_A 115 SVTIGNRAVLTCSEHDGSPPSEYSWFKD-GISMLTADAKKTRAFMNSSFTIDPK-------SGDLIFDPVTAFDSGEYYC 186 (212)
T ss_dssp EEETTSCEEEEEECSCCBSCCEEEEEET-TEESBC-----CBSCSSSCEEECTT-------TCCEEESSCCGGGCEEEEE
T ss_pred ccCCCCeEEEEEEcccCcCCCEEEEEeC-CcccccccccccccccCceeEecCC-------CceEEEEecChhhCcEEEE
Confidence 4788999999999 79999999999999 76 6654322 211111 1269999999999999999
Q ss_pred EEEcCCCce--EEEEEEEEecc
Q psy16261 79 NAKNTLGGS--EGVIKVYNIGY 98 (158)
Q Consensus 79 ~a~n~~g~~--~~~~~l~v~~~ 98 (158)
.|.|..|.. +..+.|.|...
T Consensus 187 ~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 187 QAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp EEECSSSCCEECCCEEEEEESS
T ss_pred EEccccCCccccceEEEEEEEe
Confidence 999999988 45667766653
No 239
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.19 E-value=2.7e-10 Score=78.38 Aligned_cols=90 Identities=20% Similarity=0.248 Sum_probs=62.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCC--Ce--ee-e------------cCCeEEEEEeecccceEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHEN--GS--LI-H------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~--~~--~~-~------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
++.++ .+.+.+|+.+.|.|.+.+. |.+.+.|++.. .. .+ . ...|+.+.... ..++|
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L 77 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSG-----ADRYL 77 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEET-----TEEEE
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCC-----ceEEE
Confidence 34455 7889999999999999999 89999999831 11 00 0 01255444321 13479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCC-----ceEEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLG-----GSEGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|.|.+.|..| .....+.|.|..
T Consensus 78 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 78 SISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp EESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred EEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 9999999999999999999876 223345566653
No 240
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.19 E-value=1.9e-10 Score=89.13 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=59.7
Q ss_pred EEecCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeEEE-EEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 10 GARLAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRYHM-WTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
.+.+|+.+.|.|.+.|.|++ .+.|+++ +..+..+.++.. ....++.+...+.|.|.++..+|.|.|+|.|.|..|.
T Consensus 125 ~~~~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 203 (523)
T 2rcj_C 125 EELQANKATLVCLISDFYPGAVTVAWKAD-GSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 203 (523)
T ss_pred cccCCCceEEEEEeccccCCceEEEEecC-CCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcc
Confidence 45579999999999998765 8999999 776654432221 1112234444567999999999999999999998876
Q ss_pred eEEEEE
Q psy16261 87 SEGVIK 92 (158)
Q Consensus 87 ~~~~~~ 92 (158)
....+.
T Consensus 204 ~~~~~~ 209 (523)
T 2rcj_C 204 VEKTVA 209 (523)
T ss_pred ccccee
Confidence 544443
No 241
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.19 E-value=3.4e-10 Score=78.48 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=62.8
Q ss_pred EEEecCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 9 IGARLAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+..|+++.|.|.+ +.|.| .+.|++. ...+ .+...... ...|.|.+++.+|.|.|.|.+.|..+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~-~~~l---~~~~~~~~-------~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 84 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGL-DTSL---GAVQSDTG-------RSVLTVRNASLSAAGTRVCVGSCGGRT 84 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESS-TTTT---CCEEEESS-------EEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeec-cccc---CcEEecCC-------ccEEEECccCcccCceEEEEEEeCCCc
Confidence 679999999999999 98888 9999987 3322 22222211 137999999999999999999999888
Q ss_pred eEEEEEEEEeccC
Q psy16261 87 SEGVIKVYNIGYF 99 (158)
Q Consensus 87 ~~~~~~l~v~~~~ 99 (158)
....+.|.|...|
T Consensus 85 ~~~~~~ltV~~~P 97 (210)
T 1gsm_A 85 FQHTVQLLVYAFP 97 (210)
T ss_dssp EEEEEEEEEEBCC
T ss_pred eEEEEEEEEEecC
Confidence 7888888887765
No 242
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.18 E-value=3.8e-11 Score=87.19 Aligned_cols=132 Identities=8% Similarity=-0.026 Sum_probs=82.1
Q ss_pred EecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 11 ARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 11 ~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
+..++.+.+.|.+. +.|.+.+.|+++ +..+....+. .....+.+...+.|.|......|.|.|+|.|.|..+....
T Consensus 129 ~~~~~~~~~~C~~~~~~P~~~i~W~~~-~~~~~~~~~~--~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 205 (313)
T 4fqp_A 129 LTGEPVPMARCVSTGGRPPAQITWHSD-LGGMPNTSQV--PGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQ 205 (313)
T ss_dssp CCSSCEEEEEEEEEEEBSCCEEEEEET-TCCEEEEEEE--ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCE
T ss_pred eecCceEEEEEEccCccCCcEEEeecC-Ccccccccee--eeecccccccceeeeecccccccCeeEEEEEEccCcCccc
Confidence 44577788889875 789999999999 6555432221 1111123344557999999999999999999998765533
Q ss_pred --EEEEEEeccC------C---------------------CCCc--------cc--------chhhhhhhcccccccccC
Q psy16261 90 --VIKVYNIGYF------G---------------------SDTQ--------YV--------TDEEMQRTNQIARSKWGS 124 (158)
Q Consensus 90 --~~~l~v~~~~------~---------------------~~~~--------~~--------~~~~~~~~~~~~~~~~g~ 124 (158)
.+.|.|...| . .+.. .+ ..+.+......+.|.|
T Consensus 206 ~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y-- 283 (313)
T 4fqp_A 206 LLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTL-- 283 (313)
T ss_dssp EEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEE--
T ss_pred eeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEE--
Confidence 3333322111 0 0000 00 0122222334455666
Q ss_pred cccceEeeeccCCceEEEEccccCCCCC
Q psy16261 125 ERTNQIARSKWGSGYRYTSGPIRLPDPS 152 (158)
Q Consensus 125 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (158)
.|.|.|..|....+..|.|.++|
T Consensus 284 -----~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 284 -----ICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp -----EEEEECSSCEEEEEEEEEEECCC
T ss_pred -----EEEEEeCCCcEEEEEEEEEEeCC
Confidence 99999999999999988876544
No 243
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.18 E-value=1.9e-10 Score=80.39 Aligned_cols=93 Identities=18% Similarity=0.221 Sum_probs=66.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC----CCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP----KPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p----~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
|...+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ +. .+. ...|+.+.... ...+|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~ 78 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR-----TDFTLI 78 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEE
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC-----CeEEEE
Confidence 44567778899999999999999988 7899999852 11 111 12455554322 123799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCc-eEEEEEEEEeccC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGG-SEGVIKVYNIGYF 99 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~ 99 (158)
|.+++.+|+|.|.|.+.|..+. ......|.|...+
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 114 (240)
T 1moe_A 79 IDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGG 114 (240)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCS
T ss_pred EcCCChhhCEEEEEEEccCCceeecCCEEEEEecCC
Confidence 9999999999999999998665 3344566666543
No 244
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.17 E-value=1.8e-10 Score=79.08 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=63.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC--Ce--eee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN--GS--LIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--~~--~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+.+.|++.+ .. .+. ...|+...... ..++|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (213)
T 3r06_A 4 MTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG-----RDSSFTISSL 78 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred eEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC-----CEEEEEECCC
Confidence 445577788999999999999999999999999831 11 111 13455554322 1347999999
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEEEEE
Q psy16261 69 SKSDFGTYKCNAKNTLGGS-EGVIKVYN 95 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~v 95 (158)
+.+|+|.|.|.+.|..+.. ...+.|.|
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 79 ESEDIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEE
T ss_pred CcccCEEEEEecccCCceEEcCCceEEE
Confidence 9999999999999876533 22345555
No 245
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.17 E-value=4.7e-12 Score=87.48 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=49.7
Q ss_pred eEEEecCCCEEEEeEEeecCC-----CeeEEEcCCCeeee------------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 8 LIGARLAAPLTLDCHVESYPK-----PITFWTHENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~-----p~i~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
.+.+.+|+.+.|.|.+.+.|. +.+.|++++..... ...|+.+.... .....++|.|.+++.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDL--LVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTT--GGGTBCCEEECSCCG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEeccc--ccCCeEEEEECCccc
Confidence 455789999999999988764 68999998332210 11222222100 000023699999999
Q ss_pred CCCeEEEEEEEcC
Q psy16261 71 SDFGTYKCNAKNT 83 (158)
Q Consensus 71 ~d~G~Y~C~a~n~ 83 (158)
+|+|.|+|.+.|.
T Consensus 82 ~D~G~Y~C~~~~~ 94 (222)
T 4i0k_A 82 TDEGSYTCFVSIQ 94 (222)
T ss_dssp GGCSCEEEEEEEC
T ss_pred ccCEEEEEEEEeC
Confidence 9999999999975
No 246
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.17 E-value=1e-10 Score=79.71 Aligned_cols=86 Identities=12% Similarity=0.195 Sum_probs=63.5
Q ss_pred eecCceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeee---cC---------------CeEEEEEeecccceEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVES-YPKPITFWTHENGSLIH---EG---------------SRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~---~~---------------~~~~~~~~~~~~~~~~~~l 63 (158)
+..+..+.+.+|+++.|.|.+.+ .+.+.+.|+++ +..+. .+ .|+.+.. .++|
T Consensus 2 s~~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~--------~~sL 72 (193)
T 2if7_A 2 SLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFN-ETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ--------SYSL 72 (193)
T ss_dssp -CCCEEEEEETTSCEEECCCCCCCSCCCEEEEEET-TEEEEEEECCSSSCCEEEECCHHHHTTEEECT--------TCCE
T ss_pred CCCCeEEEEEecCeEEEeccCCCcccccEEEEEEC-CEEEEEEecccCCCCceeecCccccccEEECC--------CeEE
Confidence 34577788999999999999976 45679999998 65432 11 1222221 1379
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|.|.+.|..+.....+.|.|..
T Consensus 73 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~ 106 (193)
T 2if7_A 73 QLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILR 106 (193)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EECCCCcccCceEEEEEEecCCCeEEEEEEEEEc
Confidence 9999999999999999999988766666676654
No 247
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.17 E-value=4e-10 Score=79.09 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=63.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee--------------ecCCeEEEEEeecccceEEEEEEEc
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI--------------HEGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
|..++..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +... ....|+.+..... ..++|.|.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~----~~~sL~I~ 79 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQD----RQFILSSK 79 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEET----TEEEEEES
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCC----CEEEEEEC
Confidence 455677888999999999999999999999999831 1110 0123444443211 13479999
Q ss_pred CCCCCCCeEEEEEEEcCCC------ceEEEEEEEEec
Q psy16261 67 SLSKSDFGTYKCNAKNTLG------GSEGVIKVYNIG 97 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g------~~~~~~~l~v~~ 97 (158)
+++.+|+|.|.|.+.|..| .....+.|.|..
T Consensus 80 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 80 KLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp SCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEES
T ss_pred CCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEc
Confidence 9999999999999999332 122335666654
No 248
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=85.23 Aligned_cols=81 Identities=15% Similarity=0.212 Sum_probs=63.4
Q ss_pred EEEecCCCEEEEeE-----EeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 9 IGARLAAPLTLDCH-----VESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 9 ~~~~~g~~v~l~C~-----~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
..+.+|+.+.|.|. +.|.|.+.+.|+++ +..+... .++...... +.|.|.+++..|.|.|+|.+.|
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~-g~~~~~~~~~~~~~~~~-------~~L~i~~v~~~d~G~Y~C~a~n 201 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKD-SLLLDKDNEKFLSVRGT-------THLLVHDVALEDAGYYRCVLTF 201 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSCCCBCCEES-SCBCCTTCSSEEECTTS-------SEEEESSCCGGGCEEEEEEEEC
T ss_pred eEEECCCCEEEEecCCcccccCCCCceEEEecC-CeeCCCCCceeEEcCCc-------ceEEEcccCHhhCeEEEEEEEE
Confidence 35788999999999 88999999999999 7766544 444433221 2699999999999999999999
Q ss_pred CCCc----eEEEEEEEEec
Q psy16261 83 TLGG----SEGVIKVYNIG 97 (158)
Q Consensus 83 ~~g~----~~~~~~l~v~~ 97 (158)
..|. ....+.|.|..
T Consensus 202 ~~g~~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 202 AHEGQQYNITRSIELRIKK 220 (339)
T ss_dssp CBTTBCCEEEEEEEEEEEC
T ss_pred CCCCeEEEEEEEEEEEEEc
Confidence 8873 45566776653
No 249
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.16 E-value=2.7e-10 Score=76.17 Aligned_cols=75 Identities=13% Similarity=0.110 Sum_probs=57.3
Q ss_pred EEEecCCCEEEEeEEeecCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVESYPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+.+.+++ .+.|+++ +..+... ... ..|.|.+++.+|+|.|+|.|.|..+..
T Consensus 98 ~~~~~g~~~~l~C~~~~~~~~~~~~W~k~-g~~~~~~-----~~~--------~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 163 (175)
T 1fnl_A 98 WVFKEEDPIHLRCHSWKNTALHKVTYLQN-GKDRKYF-----HHN--------SDFHIPKATLKDSGSYFCRGLVGSKNV 163 (175)
T ss_dssp SEEETTCCEEEEEEECTTCCCEEEEEEET-TEEEEEE-----EEC--------CCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ceecCCCCEEEEEEcCCCCCceEEEEEEC-CeEccCC-----CCC--------CEEEEcccChhhCeEEEEEEEcCCCCc
Confidence 457799999999999987765 9999999 7665221 111 269999999999999999999976543
Q ss_pred -EEEEEEEEec
Q psy16261 88 -EGVIKVYNIG 97 (158)
Q Consensus 88 -~~~~~l~v~~ 97 (158)
+..+.|.|.+
T Consensus 164 ~s~~~~l~V~~ 174 (175)
T 1fnl_A 164 SSETVNITITQ 174 (175)
T ss_dssp ECCCEEEEEEC
T ss_pred cCccEEEEEeC
Confidence 4456676654
No 250
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.16 E-value=2.8e-10 Score=82.79 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=54.7
Q ss_pred EecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce---
Q psy16261 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS--- 87 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~--- 87 (158)
+.+|+.+.|.|.+. .+.+.+.|+++ +..+........... ......|.|.+++.+|+|.|+|.|.|..|..
T Consensus 130 v~~G~~v~L~C~~~-~~~~~~~w~k~-g~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 203 (316)
T 3vh8_G 130 VKSGERVILQCWSD-IMFEHFFLHKE-GISKDPSRLVGQIHD----GVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLS 203 (316)
T ss_dssp EETTCCEEEEEEES-SCCSEEEEEET-TCCSCCEEEECEEET----TEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCC
T ss_pred cCCCCeEEEEEcCC-CCCcEEEEEEC-CCccccceeeeeecC----CCceEEEEECCCChhhCceEEEEEecCCCCcccc
Confidence 77899999999995 46678899999 554432211111000 0123479999999999999999999988742
Q ss_pred --EEEEEEEEec
Q psy16261 88 --EGVIKVYNIG 97 (158)
Q Consensus 88 --~~~~~l~v~~ 97 (158)
+..+.|.|..
T Consensus 204 ~~s~~~~l~V~~ 215 (316)
T 3vh8_G 204 APSDPLDIVVTG 215 (316)
T ss_dssp CCCCCEEEEEEC
T ss_pred CCCCCEEEEecC
Confidence 3345555543
No 251
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.16 E-value=2.3e-10 Score=78.47 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=62.3
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee---e---------cCCeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
+..+.+.+|+.+.|.|.+.+.|.+.+.|++++ +..+ . ...++.+.... ..+.|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~D 81 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG-----TDFTLTIDPVEADD 81 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGG
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC-----CEEEEEECCCCHHH
Confidence 77788999999999999999998999998842 1111 0 12455544322 12379999999999
Q ss_pred CeEEEEEEEcCCCceEE-EEEEEEec
Q psy16261 73 FGTYKCNAKNTLGGSEG-VIKVYNIG 97 (158)
Q Consensus 73 ~G~Y~C~a~n~~g~~~~-~~~l~v~~ 97 (158)
+|.|.|.+.|..+.... .+.|.|..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 82 TAIYFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CeEEEEEEEcCCCceeCCCEEEEEcC
Confidence 99999999998765422 34555544
No 252
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.2e-10 Score=73.88 Aligned_cols=105 Identities=18% Similarity=0.241 Sum_probs=66.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCCCe---eeecC-----CeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHENGS---LIHEG-----SRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
+..++..+.+.+|+++.|.|.+.+. +.+.+.|++.++. .+... .|+..............+|.|.+++.+|
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 90 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPAD 90 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHH
Confidence 3445667889999999999999876 5678999998322 12111 1221110000000012379999999999
Q ss_pred CeEEEEEEEcCCCc--eE----EEEEEEEeccCCCCCccc
Q psy16261 73 FGTYKCNAKNTLGG--SE----GVIKVYNIGYFGSDTQYV 106 (158)
Q Consensus 73 ~G~Y~C~a~n~~g~--~~----~~~~l~v~~~~~~~~~~~ 106 (158)
+|.|.|.+.+..+. .. ..+.|.|...+..|...+
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~P~i~~ 130 (136)
T 2d9c_A 91 AGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSG 130 (136)
T ss_dssp CEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCCCCCCC
T ss_pred CEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCCCcEee
Confidence 99999999886431 12 357788887665444433
No 253
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.16 E-value=4e-10 Score=76.12 Aligned_cols=86 Identities=17% Similarity=0.080 Sum_probs=60.0
Q ss_pred CceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeee------------cC--CeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVES-YPKPITFWTHENGSLIH------------EG--SRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
...+.+.+|+++.|.|.+.+ .+.+.+.|++.+...+. .. .|+.+.. ..++|.|.+++.
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~-------~~~sL~I~~v~~ 78 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK-------TNGALRIYNVSK 78 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT-------TTCCEEECSCCG
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC-------CCccEEEcCCCH
Confidence 45677999999999999854 34679999994232221 11 3443311 113699999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEeccC
Q psy16261 71 SDFGTYKCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
+|+|.|.|.+.+.. .....+.|.|...+
T Consensus 79 ~D~G~Y~C~v~~~~-~~~~~~~L~V~~~~ 106 (180)
T 2dru_A 79 EDRGDYYMRMLHET-EDQWKITMEVYEMV 106 (180)
T ss_dssp GGCEEEEEEEESSS-EEEEEEEEEEECCC
T ss_pred HHCeEEEEEEEcCC-eEEEEEEEEEECCC
Confidence 99999999998876 55666777776543
No 254
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.16 E-value=2.1e-10 Score=82.09 Aligned_cols=87 Identities=14% Similarity=0.177 Sum_probs=61.6
Q ss_pred EEEecCCCEEEEeEEeecCC-CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVESYPK-PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+.+.|. +.+.|+++ +..+.......... ..+...+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 196 ~~~~~g~~v~l~C~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~---~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 271 (292)
T 4dkd_C 196 LVRIRGEAAQIVCSASSVDVNFDVFLQHN-NTKLAIPQQSDFHN---NRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKH 271 (292)
T ss_dssp BCCCSSSCEEEEEEEEESSSCCEEECCBS-SCCCCCCBEEEEET---TEEEEEEEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred eeEecCCCEEEEEEecCCCCceEEEEeCC-CcccccCccceecc---ceeeeEEEEEECccChhcCeEEEEEEecCCCCc
Confidence 33468999999999998775 46778888 65544332221111 112234579999999999999999999999999
Q ss_pred EEEEEEEEeccC
Q psy16261 88 EGVIKVYNIGYF 99 (158)
Q Consensus 88 ~~~~~l~v~~~~ 99 (158)
...+.|.|....
T Consensus 272 ~~~~~l~V~~~~ 283 (292)
T 4dkd_C 272 STSMFFRVVESA 283 (292)
T ss_dssp EEEEEECC----
T ss_pred eeEEEEEEeeCC
Confidence 988888877653
No 255
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.15 E-value=5.5e-11 Score=82.39 Aligned_cols=93 Identities=17% Similarity=0.197 Sum_probs=65.1
Q ss_pred ecCceEEEecCCCEEEEeEEeecCC-CeeEEEcCCCe----eee----cCCeEEEEEe----------ecccceEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPK-PITFWTHENGS----LIH----EGSRYHMWTE----------KFSSYKFYMRLY 64 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~-p~i~W~~~~~~----~~~----~~~~~~~~~~----------~~~~~~~~~~l~ 64 (158)
..+..+.+.+|+.+.|.|.+.+.|. +.+.|++++.. .+. ....+..... ... .+.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~----~~~L~ 80 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDS----QGRLV 80 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECT----TCCEE
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCC----CceEE
Confidence 3567788999999999999999985 89999976222 111 1111111111 000 12499
Q ss_pred EcCCCCCCCeEEEEEEEcCC-CceEEEEEEEEeccCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTL-GGSEGVIKVYNIGYFG 100 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~~~ 100 (158)
|.+++.+|+|.|+|.+.|.. +.....+.|.|...+.
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 117 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPE 117 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEecCC
Confidence 99999999999999999987 7777778888776543
No 256
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.15 E-value=3.9e-10 Score=70.00 Aligned_cols=77 Identities=19% Similarity=0.329 Sum_probs=56.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
+..++..+.+.+|+++.|.|.+.+.+.+.+.|++.. +. .+. ...|+.+.... ...+|.|.++
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-----~~~~L~I~~v 80 (109)
T 2q20_A 6 MTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSG-----TDFTFTISSL 80 (109)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred EEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccC-----CEEEEEECCC
Confidence 344567788999999999999998888899999862 11 111 12455554321 1247999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16261 69 SKSDFGTYKCNAKNT 83 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~ 83 (158)
+.+|+|.|.|.+.+.
T Consensus 81 ~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 81 QPEDIATYYCQQYDN 95 (109)
T ss_dssp CGGGCEEEEEEECSS
T ss_pred ChhhCEEEEEEEeeC
Confidence 999999999999875
No 257
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.14 E-value=6.1e-10 Score=68.42 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=59.2
Q ss_pred EEEecCCCEEEEeEEee-cCCCeeEEEcCCCeeeec---CC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 9 IGARLAAPLTLDCHVES-YPKPITFWTHENGSLIHE---GS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
..+..|+.+.|.|.+.+ .|.|.++|.|-+++.... .. +......+ + . ....|.|..|..+|+|.|.|.|.|
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~-n-~-s~fiL~f~~V~~sDsG~YrCsAn~ 100 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENR-S-V-PVFVLHFKPIHLSDNGSYSCSTNF 100 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSS-S-S-CEEEEEETTCCGGGCEEEEEEEEE
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccC-C-c-eeEEEEEeeEEEcCCccEEEEeeC
Confidence 45788999999999977 679999999874532221 11 11111111 1 0 123699999999999999999999
Q ss_pred CCCceE-EEEEEEEec
Q psy16261 83 TLGGSE-GVIKVYNIG 97 (158)
Q Consensus 83 ~~g~~~-~~~~l~v~~ 97 (158)
..|... ...+|.|.+
T Consensus 101 ~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 101 NSQVINSHSVTIHVRE 116 (122)
T ss_dssp TTEEEECCCEEEEEC-
T ss_pred CCCceeeeEEEEEEEe
Confidence 988774 455666654
No 258
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.14 E-value=2.4e-10 Score=73.25 Aligned_cols=90 Identities=13% Similarity=0.196 Sum_probs=61.7
Q ss_pred eeecCceEEEecCCCEEEEeEEee---cCCCeeEEEcCCCee----eec-----------------------C--CeEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVES---YPKPITFWTHENGSL----IHE-----------------------G--SRYHM 49 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g---~p~p~i~W~~~~~~~----~~~-----------------------~--~~~~~ 49 (158)
+..++..+.+.+|+++.|.|.+.. .+.+.+.|++.+... +.. . .|+.+
T Consensus 7 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 86 (135)
T 1xt5_A 7 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 86 (135)
T ss_dssp EECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE
T ss_pred EeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE
Confidence 345667788999999999999864 577899999873211 110 0 22222
Q ss_pred EEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC-----CceEEEEEEEEec
Q psy16261 50 WTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL-----GGSEGVIKVYNIG 97 (158)
Q Consensus 50 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~-----g~~~~~~~l~v~~ 97 (158)
... ...+|.|.+++.+|+|.|.|.+.+.. |.....+.|.|..
T Consensus 87 ~~~------~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 87 ANL------AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp SCT------TSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred ecC------CCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 110 01369999999999999999999853 4445677777764
No 259
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.14 E-value=4.4e-10 Score=70.05 Aligned_cols=78 Identities=31% Similarity=0.420 Sum_probs=56.6
Q ss_pred eeecCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce----eeecCCeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS----LIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
+...|..+.+.+|+++.|.|.+.+. +.+.+.|++.. +. .+....|+........ ...+|.|.+++.+|+|
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~DsG 79 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGS---KSFSLRISDLRVEDSG 79 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTT---TEEEEEECSCCGGGCE
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCC---CEEEEEECCCChhcCE
Confidence 4456777889999999999999876 56799999851 21 2223356654432111 1347999999999999
Q ss_pred EEEEEEEc
Q psy16261 75 TYKCNAKN 82 (158)
Q Consensus 75 ~Y~C~a~n 82 (158)
.|.|.+.|
T Consensus 80 ~Y~C~~~~ 87 (111)
T 2ywz_A 80 TYKCQADY 87 (111)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 99999998
No 260
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.14 E-value=3e-10 Score=77.34 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=53.5
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC-eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS-RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+.+. .+.+.|+|+ +..+.... ++.....+ .....|.|.+++.+|+|.|+|.|.|..+..
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~-g~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~ 183 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCKE-GEDEHPQCLNSQPHARG----SSRAIFSVGPVSPSRRWWYRCYAYDSNSPY 183 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEEC-------CEEEC----------CCEEEEEECCCCTTSCEEEEEEEECTTSTT
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEEC-CCccCCccccccccCCC----cceeEEEecccCcccCeEEEEEEEeCCCCc
Confidence 357899999999999998 789999999 66543221 11111110 012379999999999999999999987632
Q ss_pred -----EEEEEEEEe
Q psy16261 88 -----EGVIKVYNI 96 (158)
Q Consensus 88 -----~~~~~l~v~ 96 (158)
+..+.|.|.
T Consensus 184 ~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 184 EWSLPSDLLELLVL 197 (198)
T ss_dssp EECCCCCCEEEEEE
T ss_pred cccCcCceEEEEec
Confidence 344555553
No 261
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.14 E-value=3.5e-10 Score=71.53 Aligned_cols=77 Identities=21% Similarity=0.322 Sum_probs=56.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-C---eeee-c--------CCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-G---SLIH-E--------GSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~---~~~~-~--------~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
++..+..+.+.+|+++.|.|.+.+.+.+.+.|++.. + ..+. . ..|+.+.... . ..+|.|.++
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~-~----~~~L~I~~v 80 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSG-R----DYSFSISNL 80 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-T----EEEEEECSC
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccC-C----EEEEEECCC
Confidence 344567788999999999999999888899999852 1 1121 1 2456554321 1 237999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16261 69 SKSDFGTYKCNAKNT 83 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~ 83 (158)
+.+|+|.|.|.+.|.
T Consensus 81 ~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 81 EPEDAATYYCLQYDN 95 (119)
T ss_dssp CGGGCEEEEEEECGG
T ss_pred ChHHCEEEEEEEccC
Confidence 999999999999885
No 262
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.14 E-value=1.4e-11 Score=72.77 Aligned_cols=61 Identities=18% Similarity=0.351 Sum_probs=48.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCC-CCCCCeEEEEEEEc
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSL-SKSDFGTYKCNAKN 82 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~Y~C~a~n 82 (158)
+++...+..|+++.|.|.+.|.|. ++|+|+ +..+... ..+ .|.|.++ ..+|+|.|+|.|.+
T Consensus 5 ~p~~~v~~~G~~v~L~C~~~g~P~--i~W~kd-g~~l~~~------~~~--------~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 5 NIEYKVSISGTSVELTCPLDSDEN--LKWEKN-GQELPQK------HDK--------HLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCCEEEEETTEEEEECSSCCCSS--CEEEET-TEECTTC------CSS--------CCBCCSCCTTTTCSCEEEECSS
T ss_pred CCceeEEEcCCeEEEEEECCCCCc--EEEEEC-CEECcCC------CCC--------EEEECccCccCcCEEEEEEEcc
Confidence 344455778999999999999883 999999 7776533 122 5999996 77999999999875
No 263
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.13 E-value=3.1e-10 Score=76.09 Aligned_cols=62 Identities=16% Similarity=0.314 Sum_probs=47.6
Q ss_pred EEEecCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 9 IGARLAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+.+|+.+.|.|.+.+.|.| .+.|+++ +..+........ ...|.|. +.+|+|.|+|.+.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~-~~~l~~~~~~~~----------~~~l~i~--~~~d~G~Y~C~~~n~ 71 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKG-GVVLKEDALPGQ----------KTEFKVD--SDDQWGEYSCVFLPE 71 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESS-SEEEECTTCCCS----------EEEEEEC--GGGCCEEEEEEEEST
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeC-CEEeecccccCC----------cEEEEEe--chhhCeEEEEEEECC
Confidence 357889999999999998877 8999999 777765432211 1246666 688999999999983
No 264
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.13 E-value=3.9e-10 Score=77.34 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=61.3
Q ss_pred CceEEEecCCCEEEEeEEeecC---CCeeEEEcCC-Ceee---e---------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP---KPITFWTHEN-GSLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p---~p~i~W~~~~-~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ +..+ . ...|+...... ..+.|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~ 81 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG-----DKAALTITGAQ 81 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCC
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeC-----CEEEEEECCCC
Confidence 7777899999999999999987 4789999862 1111 0 12455444322 12479999999
Q ss_pred CCCCeEEEEEEEcCCCceE-EEEEEEEec
Q psy16261 70 KSDFGTYKCNAKNTLGGSE-GVIKVYNIG 97 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 97 (158)
.+|+|.|.|.+.|..+... ..+.|.|..
T Consensus 82 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 110 (212)
T 1q0x_L 82 TEDEAIYFCALWSNNKLVFGGGTKLTVLG 110 (212)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred ccCCEEEEEEEecCchhhcCCCeEEEEec
Confidence 9999999999999876432 234555543
No 265
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.13 E-value=9.5e-11 Score=83.09 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=64.1
Q ss_pred CceEEEecCCCEEEEeEE---eecCCCeeEEEcCCCeeeecC---------------------CeEEEEEeecccceEEE
Q psy16261 6 SQLIGARLAAPLTLDCHV---ESYPKPITFWTHENGSLIHEG---------------------SRYHMWTEKFSSYKFYM 61 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~---~g~p~p~i~W~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~ 61 (158)
+....+.+|+.+.|.|.+ .+.|.|.+.|+++++...... .++.+... .....+
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~ 201 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGD---ISRNDG 201 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSC---GGGTBC
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeecc---CCCCeE
Confidence 455678899999999999 667899999999534321110 01111100 001123
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCceEEEEEEEEeccC
Q psy16261 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 62 ~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
.|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 202 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 202 SIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred EEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCC
Confidence 79999999999999999999999988888888885543
No 266
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.13 E-value=3.9e-10 Score=79.17 Aligned_cols=86 Identities=17% Similarity=0.205 Sum_probs=60.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEc--CCCeeee------------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTH--ENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
.+..+.+.+|+.+.|.|.+.+.|.+.+.|++ + +..+. ...++...... ...+|.|.+++.
T Consensus 141 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~-g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~ 214 (247)
T 2ghw_B 141 SPATLSLSPGERATLSCRASQSVRSNLAWYQQKP-GQAPRPLIYDASTRATGIPDRFSGSGSG-----TDFTLTISRLEP 214 (247)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCTTCEEEEEECT-TSCCEEEEETTTEECTTCCTTEEEECSS-----SEEEEEECSCCG
T ss_pred cCCEEEecCCCcEEEEEEeCCCccceEEEEEECC-CCCcEEEEEEeccCCCccCCCEEEecCC-----CeEEEEECcCCH
Confidence 3445668899999999999999999999998 4 33221 12345443221 124699999999
Q ss_pred CCCeEEEEEEEcCCCceE-EEEEEEEe
Q psy16261 71 SDFGTYKCNAKNTLGGSE-GVIKVYNI 96 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 96 (158)
+|+|.|.|.|.|..+... ..+.|.|.
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999999999998654432 24566664
No 267
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.13 E-value=5.1e-10 Score=77.80 Aligned_cols=90 Identities=22% Similarity=0.280 Sum_probs=62.1
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---ee---------ecCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LI---------HEGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~---------~~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
...+..+.+.+|+++.|.|.+.+.|.+.+.|++.+ +. .+ ....++...... ..++|.|.+++
T Consensus 28 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~ 102 (237)
T 3sob_L 28 TQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG-----TDFTLTISSLQ 102 (237)
T ss_dssp EEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCC
T ss_pred EeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCC-----CEEEEEECCCC
Confidence 34466678999999999999999999999998841 11 11 112455554222 13479999999
Q ss_pred CCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy16261 70 KSDFGTYKCNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 97 (158)
.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEec
Confidence 999999999999876532 2234454433
No 268
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.13 E-value=1.9e-10 Score=76.96 Aligned_cols=77 Identities=18% Similarity=0.160 Sum_probs=58.9
Q ss_pred EEEecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+. +.|.+.+.|+++ +..+.... .. +.|.|.++..+|+|.|+|.|.|..+..
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~-g~~~~~~~-----~~--------~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 160 (176)
T 1f2q_A 95 EVVMEGQPLFLRCHGWRNWDVYKVIYYKD-GEALKYWY-----EN--------HNISITNATVEDSGTYYCTGKVWQLDY 160 (176)
T ss_dssp SEEETTSCEEEEEEEGGGCCEEEEEEEET-TEECCSCC-----CS--------SEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ceeeCCCCEEEEEEecCCCCceEEEEEEC-CEEEeeec-----CC--------CeEEECCCCcccCEEEEEEEEeCCcce
Confidence 3577999999999994 566779999999 77663221 01 269999999999999999999974443
Q ss_pred -EEEEEEEEeccC
Q psy16261 88 -EGVIKVYNIGYF 99 (158)
Q Consensus 88 -~~~~~l~v~~~~ 99 (158)
+..+.|.|...+
T Consensus 161 ~s~~~~l~V~~~p 173 (176)
T 1f2q_A 161 ESEPLNITVIKAP 173 (176)
T ss_dssp ECCCEEEEEECSC
T ss_pred EecCEEEEEecCC
Confidence 445788887765
No 269
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=84.17 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=64.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCCCee----eec-----CCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHENGSL----IHE-----GSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
|..++..+.+.+|+.+.|.|.+.+. |.+.+.|+++ +.. +.. ..++.............+.|.|.+++.+
T Consensus 6 v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 6 VIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRG-AGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEES-CSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EEcCCCceEEecCCcEEEEEEccCcCCCceEEEEEC-CCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 4556788889999999999999997 8899999998 432 111 1233322111000011236999999999
Q ss_pred CCeEEEEEEEcCCCceE-----EEEEEEEecc
Q psy16261 72 DFGTYKCNAKNTLGGSE-----GVIKVYNIGY 98 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~-----~~~~l~v~~~ 98 (158)
|+|.|+|.+.|..+... ..+.|.|...
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~ 116 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAK 116 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEBC
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEec
Confidence 99999999999866421 2345555544
No 270
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.13 E-value=3.5e-10 Score=76.88 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=50.8
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+.+|+.+.|.|.+.+. .+.+.|+|+ +..+............ ...+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSP-MDTFLLCKE-RAAHPLLCLRSEHGAQ----QHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECTTCCEEEEEEEEEE-EEEEEEEET-TCCCGGGSEEEEEEEE----EEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eecCCCeEEEEEecCCC-CCEEEEEeC-CCcccceeeccccccc----CcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 46789999999999884 568999999 6654333211111000 1124799999999999999999999876
No 271
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.12 E-value=4.9e-10 Score=76.82 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=62.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC--Cee--ee---------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN--GSL--IH---------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--~~~--~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
+.++ .+.+.+|+.+.|.|.+. |.+.+.|++++ ... +. ...|+...... ..++|.|.+++
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~ 76 (211)
T 3tv3_L 5 TQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSG-----NTASLTVSGLQ 76 (211)
T ss_dssp BCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET-----TEEEEEEESCC
T ss_pred EeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccC-----CEEEEEECCCC
Confidence 3445 77899999999999998 88899999841 211 11 22455544322 13479999999
Q ss_pred CCCCeEEEEEEEcCCC--ceEEEEEEEEec
Q psy16261 70 KSDFGTYKCNAKNTLG--GSEGVIKVYNIG 97 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g--~~~~~~~l~v~~ 97 (158)
.+|+|.|.|.+.|..+ .....+.|.|..
T Consensus 77 ~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 106 (211)
T 3tv3_L 77 TDDEAVYYCGSLVGNWDVIFGGGTKLTVLG 106 (211)
T ss_dssp GGGCEEEEEEEEETTTEEEECCCEEEEECC
T ss_pred hhHCEEEEEEEecCCCceeECCCceEEEeC
Confidence 9999999999999887 334456676664
No 272
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.12 E-value=5.6e-11 Score=84.43 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=58.5
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+... + .+. .++.+|+|.|+|.|.|..|
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~-~~~~~~~--------g--------~~~--~v~~~d~G~Y~C~a~N~~G 252 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKD-GTFPLPI--------G--------ESV--TVTRDLEGTYLCRARSTQG 252 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEET-TTEECCT--------T--------SCE--ECCGGGCEEEEEEEEETTE
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEEC-CcccCCC--------C--------cEE--EeehhhCeEEEEEEECCCC
Confidence 3456788999999999999999999999999 5422111 1 122 3788999999999999999
Q ss_pred ceEEEEEEEEec
Q psy16261 86 GSEGVIKVYNIG 97 (158)
Q Consensus 86 ~~~~~~~l~v~~ 97 (158)
.....+.|.|.+
T Consensus 253 ~~~~~~~l~V~~ 264 (265)
T 2oz4_A 253 EVTREVTVNVLS 264 (265)
T ss_dssp EEEEEEEEEEEC
T ss_pred cEEEEEEEEEec
Confidence 999999988865
No 273
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.12 E-value=3e-10 Score=70.40 Aligned_cols=78 Identities=17% Similarity=0.327 Sum_probs=56.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-C---eeee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-G---SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
+..++..+.+.+|+++.|.|.+.+.+.+.+.|++.. + ..+. ...|+.+.... ...+|.|.++
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSA-----TDFTLTISSV 78 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCS-----SEEEEEESSC
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCC-----CEEEEEECCC
Confidence 345567778999999999999998888899999852 1 1121 12344433211 1247999999
Q ss_pred CCCCCeEEEEEEEcCC
Q psy16261 69 SKSDFGTYKCNAKNTL 84 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~ 84 (158)
+.+|+|.|.|.+.+..
T Consensus 79 ~~~DsG~Y~C~~~~~~ 94 (108)
T 1qfw_M 79 QAEDFADYHCGQTYNH 94 (108)
T ss_dssp CTTCCSEEEEEECSSS
T ss_pred ChhhCEEEEEEEccCC
Confidence 9999999999998853
No 274
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.11 E-value=4.3e-10 Score=70.25 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=60.1
Q ss_pred ecCceEEEecCCCEEEEeEEee-cCCCeeEEEcCCCe-------eee---------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 4 IPSQLIGARLAAPLTLDCHVES-YPKPITFWTHENGS-------LIH---------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
.++..+.+.+|+.+.|.|.+.+ .....+.|++.... .+. ...|+.+.... .....+|.|.
T Consensus 2 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~sL~I~ 78 (116)
T 2or8_A 2 DSYVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHI---SEGDVSLTIE 78 (116)
T ss_dssp CCCEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCG---GGTBCCEEES
T ss_pred CCcceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCC---CCCeEEEEEC
Confidence 3566788999999999999876 34567999987311 111 12333322110 0112369999
Q ss_pred CCCCCCCeEEEEEEEcCCCce--EEEEEEEEec
Q psy16261 67 SLSKSDFGTYKCNAKNTLGGS--EGVIKVYNIG 97 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~ 97 (158)
+++.+|+|.|.|.+.+..+.. ...+.|.|.+
T Consensus 79 ~v~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 79 NSVESDSGLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp SCCGGGCEEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred CCCcccCEEEEEEEEcCCcccccEEEEEEEECC
Confidence 999999999999999875443 5556666644
No 275
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.11 E-value=6.1e-11 Score=80.85 Aligned_cols=80 Identities=11% Similarity=0.101 Sum_probs=58.1
Q ss_pred EecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEE
Q psy16261 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGV 90 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 90 (158)
+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. . ......+.+ ..+.+..+..+|.|.|+|.|.|..|.....
T Consensus 115 ~~~g~~v~l~C~~~g~P~p~v~W~~~-~~~~~~--~--~~~~~~~~~---~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 186 (202)
T 3bp6_B 115 VPGTGEVQLTCQARGYPLAEVSWQNV-SVPANT--S--HIRTPEGLY---QVTSVLRLKPQPSRNFSCMFWNAHMKELTS 186 (202)
T ss_dssp CTTTCCEEEEEEEEEBSCCEEEETTC-CSCCEE--E--EEECTTSCE---EEEEEEEECCCTTCCEEEEEEETTTTEEEE
T ss_pred cCCCCeEEEEEEccccCCceEEEEeC-CCCccC--c--eeeCCCCCE---EEEEEEEEEcCCCCEEEEEEEcCCcccccE
Confidence 45799999999999999999999998 543321 1 111111111 256777888999999999999999999888
Q ss_pred EEEEEecc
Q psy16261 91 IKVYNIGY 98 (158)
Q Consensus 91 ~~l~v~~~ 98 (158)
+.|.|...
T Consensus 187 ~~l~v~~~ 194 (202)
T 3bp6_B 187 AIIDPLSR 194 (202)
T ss_dssp EEECC---
T ss_pred EEEEecCc
Confidence 88877554
No 276
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.10 E-value=1.3e-09 Score=75.13 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=62.3
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..+..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+. ...|+.+..... ...++|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L 81 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETS---ATTAYL 81 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGG---GTEEEE
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecC---CCEEEE
Confidence 345567799999999999999875 6789999862 22111 124555543210 012479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCce----EEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGGS----EGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 82 QINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp EECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred EECCCCcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 999999999999999999986422 2245666655
No 277
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.10 E-value=1.3e-10 Score=82.46 Aligned_cols=87 Identities=22% Similarity=0.171 Sum_probs=59.6
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEc--CCCeeee------------cCCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTH--ENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
+..+.+.+|+.+.|.|.+.+.|.+.+.|++ + +..+. ...++...... ...+|.|.+++.+
T Consensus 146 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~-g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~ 219 (257)
T 1f3r_B 146 PSLLSASVGDRVTLSCKGSQNINNYLAWYQQKL-GEAPKLLIYNTNSLQTGIPSRFSGSGSG-----TDYTLTISSLQPE 219 (257)
T ss_dssp TSEECCCTTCCEEEEEECSSCCBTCEEEEEECT-TSCCEEEEETTTEECTTCCTTEEEEEEB-----TEEEEEECSCCGG
T ss_pred CCEEEEcCCCCEEEEEEECCcCCCcEEEEEECC-CCCcEEEEEEccCCCCCcCCCEEEecCC-----CEEEEEECCCChh
Confidence 344557789999999999999989999999 4 33221 12455443222 1237999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 72 DFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
|+|.|.|.|.|........+.|.|...
T Consensus 220 D~G~Y~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 220 DVATYFCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp GCSEEEEEEESSSEEECCCCEECCSSS
T ss_pred hCEEEEEEEeCCCCeECCCEEEEEeCC
Confidence 999999999997511122345555443
No 278
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.10 E-value=3.8e-11 Score=87.39 Aligned_cols=69 Identities=12% Similarity=0.096 Sum_probs=49.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
...+. ..+.+|+.+.|.|.+.+. .+.+.|+|+ +..+...... .... +.|.|.+++.+|+|.|+|.|.|
T Consensus 28 ~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~-g~~~~~~~~~-~~~~--------~~L~I~~v~~~D~G~Y~C~a~~ 95 (316)
T 3vh8_G 28 SAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKE-DRIHIPIFHG-RIFQ--------ESFNMSPVTTAHAGNYTCRGSH 95 (316)
T ss_dssp EEESC-SEEETTSCEEEEEEBTTB-CCSEEEEES-SCSSSCHHHH-CCBS--------SCEEECSCCGGGCEEEEEEEBC
T ss_pred eccCC-CccCCCCCEEEEEEccCC-CceEEEEeC-CCccceeecC-Ccce--------EEEEECCCCcccCeEEEEEEEc
Confidence 33444 347799999999999988 688999999 6543221000 0011 2699999999999999999986
Q ss_pred C
Q psy16261 83 T 83 (158)
Q Consensus 83 ~ 83 (158)
.
T Consensus 96 ~ 96 (316)
T 3vh8_G 96 P 96 (316)
T ss_dssp S
T ss_pred C
Confidence 4
No 279
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.10 E-value=8.4e-10 Score=68.88 Aligned_cols=81 Identities=20% Similarity=0.288 Sum_probs=56.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Cee---e-------ecCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSL---I-------HEGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~---~-------~~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
+...+..+.+.+|+.+.|.|.+.+.+ +.+.|++.. +.. + ....|+.+.... ......+|.|.+++.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~--~~~~~~~L~I~~v~~ 80 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDS--ERARYSTLHIRDAQL 80 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCS--SSSSEEEEEECSCCG
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEcc--CCCCEEEEEECCCCh
Confidence 34556777899999999999998765 789998762 111 1 112444443211 011234799999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy16261 71 SDFGTYKCNAKNTLG 85 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g 85 (158)
+|+|.|.|.+.|..|
T Consensus 81 ~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 81 EDSGTYFCAAEASSG 95 (113)
T ss_dssp GGCEEEEEEEECSSS
T ss_pred hhCEEEEEEEecCCC
Confidence 999999999999765
No 280
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.10 E-value=5.5e-10 Score=78.54 Aligned_cols=91 Identities=23% Similarity=0.302 Sum_probs=63.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCC----eeee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENG----SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+.+.|++.+. ..+. ...|+...... ...+|.|.++
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 81 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG-----TDYSLTISNL 81 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred EEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC-----CEEEEEEccC
Confidence 4456777889999999999999999999999998521 1110 12455443322 1237999999
Q ss_pred CCCCCeEEEEEEEcCCCceE-EEEEEEEec
Q psy16261 69 SKSDFGTYKCNAKNTLGGSE-GVIKVYNIG 97 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 97 (158)
+.+|+|.|.|.+.|..+... ....|.|..
T Consensus 82 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 82 EQEDIGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ChhhCEEEEEEEeeCCCceECCCEEEEEEC
Confidence 99999999999999766432 233455543
No 281
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.10 E-value=2.5e-10 Score=75.65 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=55.5
Q ss_pred EEEecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 9 IGARLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
..+.+|+.+.|.|.+. +.|.+.+.|+++ +..+.... .. ..|.|.++..+|+|.|+|.|.|..|..
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~-g~~~~~~~-----~~--------~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 160 (170)
T 3ry4_A 95 LEFQEGETIMLRCHSWKDKPLVKVTFFQN-GKSQKFSH-----LD--------PTFSIPQANHSHSGDYHCTGNIGYTLF 160 (170)
T ss_dssp SEECTTCCEEEEEEEGGGCCEEEEEEEET-TEEEEEES-----SC--------CEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ceeecCCeEEEEEECCCCCCCceEEEEEC-CeEccccC-----CC--------CeEEEEeccccCCEEEEEEEEeCcCcc
Confidence 3577899999999995 456689999999 76553211 11 269999999999999999999998863
Q ss_pred -EEEEEEEE
Q psy16261 88 -EGVIKVYN 95 (158)
Q Consensus 88 -~~~~~l~v 95 (158)
+..+.|.|
T Consensus 161 ~s~~~~l~V 169 (170)
T 3ry4_A 161 SSKPVTITV 169 (170)
T ss_dssp ECCCEEEEE
T ss_pred ccccEEEEE
Confidence 44555554
No 282
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.10 E-value=3.4e-10 Score=70.05 Aligned_cols=77 Identities=16% Similarity=0.265 Sum_probs=56.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee-c--------CCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH-E--------GSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~-~--------~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++.. +. .+. . ..|+.+.... . ..+|.|.++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~----~~~L~I~~v 78 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTG-T----DFVFTIENT 78 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-T----EEEEEESSC
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccC-C----EEEEEECCC
Confidence 344567788999999999999998888899999852 11 121 1 2456554321 1 237999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16261 69 SKSDFGTYKCNAKNT 83 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~ 83 (158)
+.+|+|.|.|.+.+.
T Consensus 79 ~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 79 LSEDVGDYYCLQSFN 93 (107)
T ss_dssp CGGGCEEEEEEECSS
T ss_pred CHHHCEEEEEEEeeC
Confidence 999999999999875
No 283
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.10 E-value=6.7e-11 Score=81.43 Aligned_cols=73 Identities=16% Similarity=0.288 Sum_probs=55.9
Q ss_pred ecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC--CeEEEEEeecccceEEEEEEEcCC-CCCCCeEEEEEEEcCCCce-
Q psy16261 12 RLAAPLTLDCHVESYPKPITFWTHENGSLIHEG--SRYHMWTEKFSSYKFYMRLYIGSL-SKSDFGTYKCNAKNTLGGS- 87 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~Y~C~a~n~~g~~- 87 (158)
.+|+.+.|.|. +.|.|.+.|+++ +..+... .+....... .|.|.++ +.+|+|.|+|.|.|..|..
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~-~~~l~~~~~~~~~~~~~~--------~L~I~~v~~~~D~G~Y~C~A~N~~g~~~ 194 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHN-DKNIGGDEDDKNIGSDED--------HLSLKEFSELEQSGYYVCYPRGSKPEDA 194 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEET-TEEESCCTTCTTEEEETT--------EEEETTCCHHHHCEEEEEEETTSCGGGS
T ss_pred ecCCcEEEEcC--CCCCCceEEEEC-CEECCCccCCceEecCCC--------EEEEeeCCccccCEEEEEEeccCCCCce
Confidence 38999999999 889999999999 7766443 122122233 7999999 9999999999999999963
Q ss_pred EEEEEEEE
Q psy16261 88 EGVIKVYN 95 (158)
Q Consensus 88 ~~~~~l~v 95 (158)
+..+.|.+
T Consensus 195 s~~l~l~~ 202 (204)
T 1sy6_A 195 NFYLYLRA 202 (204)
T ss_dssp SCEEEEEE
T ss_pred eEEEEEEE
Confidence 45555544
No 284
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=4.7e-10 Score=79.31 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=57.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
|+..+.. .+.+|+++.|.|.+.+ +.+.+.|+|+ +..+... .+. ........|.|.+++.+|+|.|+|.+
T Consensus 10 i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~-g~~~~~~~~~~-------~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 10 IWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFE-GSLFAVDRPKP-------PERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp EEEESCS-EEETTCCEEEEEECCT-TCCEEEEEET-TEEEEEECCSS-------CTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred EEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEEC-CCccccccccc-------cCCcceeEEEecCCCcccCeEEEEEE
Confidence 3444544 5889999999999875 4568899999 6654311 000 00011247999999999999999999
Q ss_pred EcCCCce--EEEEEEEEec
Q psy16261 81 KNTLGGS--EGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~~--~~~~~l~v~~ 97 (158)
.|..+.. +..+.|.|.+
T Consensus 80 ~~~~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTE 98 (242)
T ss_dssp EETTEECCCCCCEEEEEEC
T ss_pred ecCCccccCCcceEEEeec
Confidence 8864422 3345555543
No 285
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.10 E-value=8.9e-10 Score=85.31 Aligned_cols=89 Identities=18% Similarity=0.160 Sum_probs=63.2
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee---e---------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++ +..+ . ...|+...... ..+.|.|.+++
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~ 78 (523)
T 2rcj_C 4 LTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSG-----TSASLAISGLE 78 (523)
T ss_pred cccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCC-----CEEEEEECCCC
Confidence 34566778999999999999999999999999873 1111 1 12344432211 13479999999
Q ss_pred CCCCeEEEEEEEcCCCce---EEEEEEEEe
Q psy16261 70 KSDFGTYKCNAKNTLGGS---EGVIKVYNI 96 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g~~---~~~~~l~v~ 96 (158)
.+|+|.|+|.+.|..|.. ...+.|.|.
T Consensus 79 ~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~ 108 (523)
T 2rcj_C 79 AEDESDYYCASWNSSDNSYVFGTGTKVTVL 108 (523)
T ss_pred hhhCEEEEEEEccCCCccccccCceEEEec
Confidence 999999999999987632 234566664
No 286
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.10 E-value=5.4e-10 Score=79.04 Aligned_cols=89 Identities=18% Similarity=0.189 Sum_probs=61.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
.+..+.+.+|+.+.|.|.+.+.|.+.+.|++.. +..+. ...|+...... ...+|.|.+++.+
T Consensus 144 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~ 218 (256)
T 3umt_A 144 SPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG-----SDYSLTISSLESE 218 (256)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET-----TEEEEEECSCCGG
T ss_pred CCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC-----CEEEEEECCCChh
Confidence 345567889999999999999999999999841 11111 12455444322 1246999999999
Q ss_pred CCeEEEEEEEcCCCceEE-EEEEEEecc
Q psy16261 72 DFGTYKCNAKNTLGGSEG-VIKVYNIGY 98 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~~-~~~l~v~~~ 98 (158)
|+|.|.|.+.|..+.... .+.|.|...
T Consensus 219 D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 219 DFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred HCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 999999999986554422 466766654
No 287
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.09 E-value=2.1e-09 Score=86.52 Aligned_cols=92 Identities=20% Similarity=0.149 Sum_probs=61.7
Q ss_pred ceEEEecCCCEEEEeEEeec--CCCeeEEEcCCCeeeecCCeEEEEEee---cccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 7 QLIGARLAAPLTLDCHVESY--PKPITFWTHENGSLIHEGSRYHMWTEK---FSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
..+.+.+|+.+.|.|.+.+. +.+.+.|+++ +..+............ .......+.|.|.+++.+|.|.|+|.+.
T Consensus 232 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 310 (772)
T 3v2a_R 232 HGIELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 310 (772)
T ss_dssp SCEEEETTCCEEEEEEEEECTTCCCEEEEECC---------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEE
T ss_pred CceEEecCCcEEEEEEEecCCCCceeEEEecC-CccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEE
Confidence 33578899999999999984 4568999999 6554332221110000 0112234579999999999999999999
Q ss_pred cCCCceEEEEEEEEeccC
Q psy16261 82 NTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~ 99 (158)
|..+.....+.|.|...+
T Consensus 311 ~~~~~~~~~~~l~V~~~p 328 (772)
T 3v2a_R 311 SGLMTKKNSTFVRVHEKP 328 (772)
T ss_dssp CSSCEEEEEEEEEEECCC
T ss_pred cCCcceeEEEEEEEeCCC
Confidence 999888778888776644
No 288
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.09 E-value=1.7e-10 Score=84.24 Aligned_cols=77 Identities=13% Similarity=0.253 Sum_probs=50.8
Q ss_pred EecCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 11 ARLAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+|+.+.|.|.+.|.+++ .+.|+++ +..+............++.+...+.|.|..+..+|.|.|+|.|.|..|...
T Consensus 232 ~~~G~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQRLQLTWLEN-GNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSSCEEEEEEET-TEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCE
T ss_pred cCCCCcEEEEEEEccccCCCcEEEEEEC-CeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCc
Confidence 4589999999999996444 7999999 777654322222333323455556799999999999999999999988763
No 289
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.09 E-value=8.7e-10 Score=70.26 Aligned_cols=92 Identities=20% Similarity=0.291 Sum_probs=63.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC----CCeeEEEcCC-C---eeee---------cCCeEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP----KPITFWTHEN-G---SLIH---------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p----~p~i~W~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
|+.++..+.+.+|+++.|.|.+.+.+ .+.+.|++.. + ..+. ...|+...... ...+|.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~sL~ 78 (126)
T 4ffy_L 4 LTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSE-----TDFTLT 78 (126)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-----TEEEEE
T ss_pred EEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCC-----CEEEEE
Confidence 45567778899999999999998876 5689999852 1 1111 12455554222 124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCceE-EEEEEEEecc
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGGSE-GVIKVYNIGY 98 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 98 (158)
|.+++.+|+|.|.|.+.+...... ..+.|.|...
T Consensus 79 I~~v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 79 IDSVETDDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred ECCCCHHHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 999999999999999998654332 2466666654
No 290
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.08 E-value=1.4e-09 Score=73.98 Aligned_cols=77 Identities=10% Similarity=0.168 Sum_probs=53.8
Q ss_pred ecCCCEEEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeec-ccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 12 RLAAPLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKF-SSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 12 ~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
..|+.+.|.|.+. |.|.|.+.|+++ +..+..... ....... +.+...+. ..+...|.|.|+|.|.|..|..+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~-g~~l~~~~~-~~~~~~~~~~~~~~~~---~~v~~~d~g~Y~C~a~n~~~~~s~ 193 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLEN-GEELNAINT-TVSQDPETELYAVSSK---LDFNMTTNHSFMCLIKYGHLRVNQ 193 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEES-SCEECCSEE-EEEECTTTCCEEEEEE---EEEETTSCEEEEEEEEETTCCEEE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEEC-CEECccccc-eEEecCCCcEEEEEEE---EEEEecCCCEEEEEEecCcceeee
Confidence 4577899999995 999999999999 777654422 2222211 23332233 344568999999999999998877
Q ss_pred EEEE
Q psy16261 90 VIKV 93 (158)
Q Consensus 90 ~~~l 93 (158)
.+.+
T Consensus 194 ~~~~ 197 (201)
T 1dr9_A 194 TFNW 197 (201)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7664
No 291
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.08 E-value=6.2e-10 Score=78.23 Aligned_cols=91 Identities=19% Similarity=0.231 Sum_probs=63.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-C---eeee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-G---SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|...+..+.+.+|+++.|.|.+.+.|.+.+.|+++. + ..+. ...|+.+.... ...+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG-----TDFTLSINSV 78 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-----TEEEEEESSC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC-----CEEEEEECCC
Confidence 455677788999999999999999999999999852 1 1111 12455554322 1237999999
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy16261 69 SKSDFGTYKCNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 97 (158)
+.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 79 ~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~ 108 (242)
T 2znx_A 79 ETEDFGMYFCQQSNSXPYTFGGGTKLEITG 108 (242)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ChHHCEEEEEeEecCCceEECCCEEEEEcC
Confidence 9999999999999975432 2234555544
No 292
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.08 E-value=8.2e-10 Score=68.43 Aligned_cols=78 Identities=28% Similarity=0.392 Sum_probs=56.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce----eeecCCeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS----LIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
+...|..+.+.+|+++.|.|.+.+.+ .+.+.|++.. +. .+....|+.+...... ...+|.|.+++.+|+|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~~~~~DsG 79 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGS---NSASLTIRDLRVEDSG 79 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTT---TEEEEEECSCCGGGCE
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCC---CEEEEEECCCCcccCE
Confidence 45567778899999999999998763 5689999862 11 2223356654432111 1347999999999999
Q ss_pred EEEEEEEc
Q psy16261 75 TYKCNAKN 82 (158)
Q Consensus 75 ~Y~C~a~n 82 (158)
.|.|.+.+
T Consensus 80 ~Y~C~~~~ 87 (108)
T 2coq_A 80 TYKCKAYR 87 (108)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999987
No 293
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.08 E-value=3.2e-09 Score=66.11 Aligned_cols=91 Identities=16% Similarity=0.197 Sum_probs=63.0
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC-eeEEEcCCC----eee-e--------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP-ITFWTHENG----SLI-H--------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~----~~~-~--------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
.+..+.+.+|+++.|.|...+.... .+.|++... ..+ . ..+|+.+..... ....+|.|.+++.
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~I~~~~~ 83 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQR---DFIFTVTMEDLRM 83 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETT---TTEEEEEECSCCG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCc---CCEEEEEEccCCH
Confidence 3556789999999999999875443 699998732 111 1 123454442210 1134799999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 71 SDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
+|+|.|.|.+.+........+.|.|...
T Consensus 84 ~DsG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (113)
T 1zox_A 84 SDAGIYWCGITKGGLDPMFKVTVNIGPV 111 (113)
T ss_dssp GGCEEEEEEECCSSSCCEEEEEEEEECC
T ss_pred HHCEEEEEeeEcCCCCccEEEEEEEEcC
Confidence 9999999999987555577778877654
No 294
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.08 E-value=3.8e-10 Score=79.73 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=62.4
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC----eeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP----ITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p----~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
.+..+.+.+|+++.|.|.+.+.+.+ .+.|+++. +..+. ...|+...... ..++|.|.+
T Consensus 139 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~ 213 (253)
T 3uzq_A 139 TPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSR-----TDFTLTINP 213 (253)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESS
T ss_pred cCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCC-----CEEEEEECC
Confidence 4555678899999999999998887 89999841 11111 11345443222 124799999
Q ss_pred CCCCCCeEEEEEEEcCCCceEE-EEEEEEeccCC
Q psy16261 68 LSKSDFGTYKCNAKNTLGGSEG-VIKVYNIGYFG 100 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~~ 100 (158)
++.+|+|.|.|.+.|..+.... .+.|.|...+.
T Consensus 214 v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~ 247 (253)
T 3uzq_A 214 VEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLE 247 (253)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCC--
T ss_pred CCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCC
Confidence 9999999999999997655433 46677766543
No 295
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.07 E-value=6.8e-10 Score=68.89 Aligned_cols=84 Identities=24% Similarity=0.184 Sum_probs=59.3
Q ss_pred CceEEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeec--------------CCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHE--------------GSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
...+.+.+|+++.|.|.. .+.+.+.+.|++..+..+.. ..|+.+.. . ..+|.|.+++.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~---~----~~sL~I~~v~~ 82 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE---N----NGALHISNVRK 82 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT---T----TCCEEESSCCG
T ss_pred CCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC---C----CccEEECCCCc
Confidence 455779999999999998 67777899999853332210 12443321 1 13699999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 71 SDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
+|+|.|.|.+.+.. .....+.|.|.+
T Consensus 83 ~DsG~Y~C~v~~~~-~~~~~~~L~V~d 108 (110)
T 2ptt_A 83 EDKGTYYMRVLRET-ENELKITLEVFD 108 (110)
T ss_dssp GGCEEEEEEEESSS-BCCEEEEEEEEC
T ss_pred ccCeEEEEEEEcCC-CcEEEEEEEEEc
Confidence 99999999998765 344466776654
No 296
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.07 E-value=4e-10 Score=70.03 Aligned_cols=73 Identities=16% Similarity=0.304 Sum_probs=49.5
Q ss_pred EecCCCEEEEeEEeecCCC-----eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 11 ARLAAPLTLDCHVESYPKP-----ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p-----~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+.+|+.+.|.|.+.+.+.. .+.|+|+ +..+.. .... +.|.|.+++.+|+|.|.|.+.|..+
T Consensus 19 v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~-g~~l~~-----~~~~--------~~l~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 19 PQAGSPMTLSCQTKLPLQRSAARLLFSFYKD-GRIVQS-----RGLS--------SEFQIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp CBTTCCEEEEEEC---------CCEEEEEET-TEEEEE-----EESC--------CEEEESSCCGGGCEEEEEEEECTTS
T ss_pred CCCCCcEEEEEcccCCCCCcCcceEEEEEEC-CcCccC-----CCcc--------cEEEeCccCcccCeEEEEEEEeCCC
Confidence 6789999999999876544 3889999 765531 1111 2699999999999999999999765
Q ss_pred ce---EEEEEEEEec
Q psy16261 86 GS---EGVIKVYNIG 97 (158)
Q Consensus 86 ~~---~~~~~l~v~~ 97 (158)
.. +..+.|.|.+
T Consensus 85 ~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 85 QVWKQSPQLEIRVQG 99 (108)
T ss_dssp SSEEECCCEEECCBC
T ss_pred ceeccCCCEEEEEEe
Confidence 32 3345555544
No 297
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.07 E-value=8.6e-10 Score=77.47 Aligned_cols=91 Identities=15% Similarity=0.232 Sum_probs=63.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-----CCeeEEEcCC-Cee---ee---------cCCeEEEEEeecccceEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-----KPITFWTHEN-GSL---IH---------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-----~p~i~W~~~~-~~~---~~---------~~~~~~~~~~~~~~~~~~~~l 63 (158)
|...+..+.+.+|+.+.|.|.+.+.| .+.+.|++.+ +.. +. ...|+.+.... ...+|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L 78 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSG-----TDFTL 78 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEE
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCC-----CEEEE
Confidence 45567778899999999999999988 6899999852 111 11 12455554322 12379
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 79 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 113 (247)
T 1svz_A 79 KISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKG 113 (247)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EECCCCHHHCEEEEEEEccCCccEECCCEEEEEEC
Confidence 999999999999999999976542 2234555544
No 298
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.07 E-value=2.8e-11 Score=82.44 Aligned_cols=79 Identities=23% Similarity=0.431 Sum_probs=59.3
Q ss_pred EEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeecCCe---------EEEEEeecccceEEEEEEEcCCCCCCCeEEEE
Q psy16261 9 IGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHEGSR---------YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKC 78 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 78 (158)
..+.+|+.+.|.|.+ .+.|.|.+.|+++ +..+....+ +.... ..+.|.|.++..+|.|.|+|
T Consensus 117 ~~~~~g~~~~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C 188 (209)
T 1nbq_A 117 SSATIGNRAVLTCSEQDGSPPSEYTWFKD-GIVMPTNPKSTRAFSNSSYVLNP-------TTGELVFDPLSASDTGEYSC 188 (209)
T ss_dssp SEEETTSCEEECCCCCSCBSCCEEEEEET-TCCCCSCSSSSSSCTTCCCCCCT-------TTCCEEESSCCGGGCCCEEE
T ss_pred cceecCCEEEEEEeCCCCCCCceeEEEEC-CeeCCCccccceeeeccceEEcC-------CcceEEEEeccccCCeEEEE
Confidence 347889999999997 9999999999999 666554321 11110 01369999999999999999
Q ss_pred EEEcCCCce--EEEEEEEE
Q psy16261 79 NAKNTLGGS--EGVIKVYN 95 (158)
Q Consensus 79 ~a~n~~g~~--~~~~~l~v 95 (158)
.|.|..|.. +..+.|.|
T Consensus 189 ~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 189 EARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp EEECSSSCCEECCCBCCEE
T ss_pred EEeCCcCcccccccEEEEE
Confidence 999999988 33444444
No 299
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.07 E-value=1.1e-10 Score=78.60 Aligned_cols=66 Identities=14% Similarity=0.045 Sum_probs=52.4
Q ss_pred cCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy16261 13 LAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIK 92 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 92 (158)
.+..+.|.|.+.|.|.|.+.|+++ +..+....+ +.|..+..+|+|.|+|.|.|.+|.......
T Consensus 109 ~~~~v~L~C~~~g~p~p~i~W~~~-g~~l~~~~~----------------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 171 (176)
T 1hng_A 109 ECSNATLTCEVLEGTDVELKLYQG-KEHLRSLRQ----------------KTMSYQWTNLRAPFKCKAVNRVSQESEMEV 171 (176)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEET-TEEEEEESS----------------SEEEEECSCCSSCEEEEEEETTEEEEEEEC
T ss_pred cCCcEEEEEEecCCCCcEEEEEEC-CEECCCCCc----------------EEEEEEEccCCeEEEEEEEecCCCceeccc
Confidence 455799999999999999999999 776644322 334467799999999999999998877766
Q ss_pred EEE
Q psy16261 93 VYN 95 (158)
Q Consensus 93 l~v 95 (158)
|.+
T Consensus 172 l~~ 174 (176)
T 1hng_A 172 VNC 174 (176)
T ss_dssp CCC
T ss_pred ccC
Confidence 543
No 300
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.06 E-value=6.8e-11 Score=80.12 Aligned_cols=60 Identities=23% Similarity=0.437 Sum_probs=49.5
Q ss_pred ecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 12 RLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.+|+.+.|.|.+ |.|.+.|+|+ +..+..... .. +.|.|.++..+|+|.|+|.|.|..|..
T Consensus 120 ~~G~~v~l~C~~---p~p~i~W~k~-g~~i~~~~~----~~--------~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 120 RGDGSVLLTCGL---TDKTIKWLKD-GSIISPLNA----TK--------NTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSSCEEEEECSS---SCSCEEEEET-TEECCCSSC----CS--------SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCCeEEEEeeC---CCCeEEEEEC-CEECcccCC----Cc--------ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 389999999999 8899999999 777653322 11 259999999999999999999998765
No 301
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.06 E-value=7.2e-11 Score=81.06 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=56.7
Q ss_pred cCCCEEEEeEEeecC-C-CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEE
Q psy16261 13 LAAPLTLDCHVESYP-K-PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGV 90 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p-~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 90 (158)
+|+.+.|.|.+.|.+ . +.+.|+++ +..+..+.........+..+...+.|.|..+..+|.|.|+|.|.|..+.....
T Consensus 128 ~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 206 (213)
T 3mj8_L 128 KTNQATLVCMINGFYPADVAVTWEAD-GTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKS 206 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEET-TEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEeeceeCCCeEEEEEcC-CcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEee
Confidence 599999999999963 3 38999999 87775431111111122344455679999999999999999999998766555
Q ss_pred EE
Q psy16261 91 IK 92 (158)
Q Consensus 91 ~~ 92 (158)
+.
T Consensus 207 ~~ 208 (213)
T 3mj8_L 207 LS 208 (213)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 302
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.06 E-value=1.1e-09 Score=74.95 Aligned_cols=90 Identities=13% Similarity=0.234 Sum_probs=60.5
Q ss_pred cCceEEEecCCCEEEEeEEeec-------CCCeeEEEcCCCee------ee-----------cCCeEEEEEeecccceEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY-------PKPITFWTHENGSL------IH-----------EGSRYHMWTEKFSSYKFY 60 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~-------p~p~i~W~~~~~~~------~~-----------~~~~~~~~~~~~~~~~~~ 60 (158)
.+..+.+.+|+.+.|.|.+.+. +.+.+.|+++ +.. +. ...|+.+..... ...
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~ 81 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRD-GEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQ---KKN 81 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEET-TCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGG---GTB
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEec-CCCCcccceEecCCcccccCccccCceEEeccCC---CCe
Confidence 4667789999999999999864 5678999998 431 11 123554432110 012
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcCCCceE----EEEEEEEecc
Q psy16261 61 MRLYIGSLSKSDFGTYKCNAKNTLGGSE----GVIKVYNIGY 98 (158)
Q Consensus 61 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~----~~~~l~v~~~ 98 (158)
++|.|.+++.+|+|.|.|.+.+..+... ..+.|.|...
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~ 123 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL 123 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECC
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecC
Confidence 2699999999999999999998763221 2455666543
No 303
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.06 E-value=2.3e-09 Score=75.11 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=61.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-------------CeeeecC----CeEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-------------GSLIHEG----SRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-------------~~~~~~~----~~~~~~~~~~~~~~~~~~l~ 64 (158)
++..+..+.+.+|+.+.|.| ..+.+.+.+.|++.. +...... .|+.+..... ...+|.
T Consensus 5 v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~sL~ 79 (245)
T 4ei6_B 5 VLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDG----SYFTLK 79 (245)
T ss_dssp CEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTT----SCEEEE
T ss_pred eEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccC----ceEEEE
Confidence 34567778899999999999 778888999999820 1111111 4555543221 124799
Q ss_pred EcCCCCCCCeEEEEEEEcC----CCceEEEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNT----LGGSEGVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~----~g~~~~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.+. .......+.|.|..
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (245)
T 4ei6_B 80 IQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLE 116 (245)
T ss_dssp ECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEES
T ss_pred ECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEec
Confidence 9999999999999999953 22223345666654
No 304
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.06 E-value=8.5e-10 Score=79.02 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=59.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCC----eeee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENG----SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++. ..+. ...|+.+.... ...+|.|.++
T Consensus 15 v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 89 (276)
T 3auv_A 15 MTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG-----TDFTLTISSL 89 (276)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred EEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccC-----CeEEEEEccC
Confidence 3445677788999999999999999999999998621 1121 12455554322 1237999999
Q ss_pred CCCCCeEEEEEEEcCCCc
Q psy16261 69 SKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+|.|.|.+.|..+.
T Consensus 90 ~~~DsG~Y~C~~~n~~~~ 107 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPP 107 (276)
T ss_dssp CGGGCEEEEEEECSSSSC
T ss_pred ChhhCEEEEEEEecCCcc
Confidence 999999999999997543
No 305
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.06 E-value=1.4e-09 Score=75.88 Aligned_cols=77 Identities=22% Similarity=0.301 Sum_probs=55.1
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCeeEEEcCCC----eee---------ecCCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENG----SLI---------HEGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~----~~~---------~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
.+..+.+.+|+.+.|.|.+.+.|.|.+.|++++. ..+ ....++.+..... ...+.|.|.+++.+
T Consensus 133 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~ 209 (238)
T 2p1y_A 133 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKR---EKKLSLHIADSQPG 209 (238)
T ss_dssp ECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETT---TTEEEEEETTCCGG
T ss_pred cCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCC---CCeEEEEEcCCCHH
Confidence 3455678899999999999999999999998621 111 1123444432110 01247999999999
Q ss_pred CCeEEEEEEEcCC
Q psy16261 72 DFGTYKCNAKNTL 84 (158)
Q Consensus 72 d~G~Y~C~a~n~~ 84 (158)
|+|.|+|.|.|..
T Consensus 210 D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 210 DSATYFCAAIDTN 222 (238)
T ss_dssp GCEEEEEEEEETT
T ss_pred HCEEEEEEEeeCC
Confidence 9999999999974
No 306
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.05 E-value=1.7e-09 Score=69.21 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=64.7
Q ss_pred eecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCC-C---e-eeec---------CCeEEEEEeecccceEEEEEEEcC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP-KPITFWTHEN-G---S-LIHE---------GSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~-~---~-~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
+..+..+.+.+|+.+.|.|.+.+.. ...+.|++.. + . .+.. .+|+.+..... ....+|.|.+
T Consensus 5 ~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~---~~~~sL~I~~ 81 (129)
T 3rrq_A 5 TFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPN---GRDFHMSVVR 81 (129)
T ss_dssp EEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTT---SSEEEEEESS
T ss_pred EECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCC---CCEEEEEECC
Confidence 4456678899999999999998765 4579998641 1 1 1111 13555543111 1134799999
Q ss_pred CCCCCCeEEEEEEEcCCCce----EEEEEEEEeccC
Q psy16261 68 LSKSDFGTYKCNAKNTLGGS----EGVIKVYNIGYF 99 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~~~ 99 (158)
++.+|+|.|.|.+.+..+.. ...+.|.|...+
T Consensus 82 ~~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 82 ARRNDSGTYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp CCGGGCEEEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred CChhHCEEEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 99999999999999987655 345777777654
No 307
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.05 E-value=2.5e-09 Score=67.42 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=58.2
Q ss_pred cCceEEEecCCCEEEEeEEeec----CCCeeEEEcCCCe------eeec-------------CCeEEEEEeecccceEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY----PKPITFWTHENGS------LIHE-------------GSRYHMWTEKFSSYKFYM 61 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~----p~p~i~W~~~~~~------~~~~-------------~~~~~~~~~~~~~~~~~~ 61 (158)
.+..+.+.+|+++.|.|.+... +.+.+.|++.+.. .+.. ..|+.+.... ....+
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~ 81 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDP---SWKDG 81 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBG---GGTBC
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCC---cCCeE
Confidence 4566789999999999998653 4668999886220 1100 1233322110 00123
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCc--eEEEEEEEEeccC
Q psy16261 62 RLYIGSLSKSDFGTYKCNAKNTLGG--SEGVIKVYNIGYF 99 (158)
Q Consensus 62 ~l~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~v~~~~ 99 (158)
+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|...+
T Consensus 82 sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 82 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp CEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred EEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 7999999999999999999998765 3667788887654
No 308
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.05 E-value=1.3e-09 Score=76.81 Aligned_cols=89 Identities=16% Similarity=0.243 Sum_probs=61.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecC-----CCeeEEEcCC-Ceee----------e--cCCeEEEEEeecccceEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP-----KPITFWTHEN-GSLI----------H--EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p-----~p~i~W~~~~-~~~~----------~--~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
...+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ +..+ . ...|+.+.... ..++|.
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~ 116 (254)
T 2c1o_A 42 TQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSG-----TDFTLK 116 (254)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEE
T ss_pred EeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCC-----CEEEEE
Confidence 3446677899999999999999988 4899999742 2211 1 12455554322 123799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCceEE-EEEEEEe
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGGSEG-VIKVYNI 96 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~ 96 (158)
|.+++.+|+|.|.|.+.|..+.... ...|.|.
T Consensus 117 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 117 ISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp ESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred ECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 9999999999999999998654321 2344444
No 309
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.04 E-value=1.5e-09 Score=67.59 Aligned_cols=77 Identities=12% Similarity=0.287 Sum_probs=56.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCC----eeee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENG----SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
+...+..+.+.+|+++.|.|.+.+.+.+.+.|++... ..+. ...|+...... ...+|.|.++
T Consensus 7 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-----~~~~L~I~~v 81 (111)
T 1i3g_L 7 LTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSG-----TDFTLTISNV 81 (111)
T ss_dssp EEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred EEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCC-----CEEEEEECCC
Confidence 3455677889999999999999888778999998621 1121 12455554321 1237999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16261 69 SKSDFGTYKCNAKNT 83 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~ 83 (158)
+.+|+|.|.|.+.+.
T Consensus 82 ~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 82 QSEDLADYFCQQYSS 96 (111)
T ss_dssp CGGGCSEEEEEECSS
T ss_pred CHHHCEEEEEEEecC
Confidence 999999999999875
No 310
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.04 E-value=2.1e-09 Score=73.41 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=54.8
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC---
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG--- 85 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g--- 85 (158)
..+.+|+++.|.|.+.+ +.+.+.|+|+ +..+.......... .......|.|.+++.+|+|.|+|.+.|...
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~----~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~ 90 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFEHFLLHRE-GMFNDTLRLIGEHH----DGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQ 90 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCSEEEEEEE-SSSCEEEEEECEEE----TTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTC
T ss_pred CccCCCCcEEEEEeccC-CCCEEEEEEC-CCcCCcceeeeecC----CCCceEEEEeccCCcccCeEEEEeEecCCCCcc
Confidence 45789999999999974 7789999999 65443211100000 001224799999999999999999987521
Q ss_pred --ceEEEEEEEEec
Q psy16261 86 --GSEGVIKVYNIG 97 (158)
Q Consensus 86 --~~~~~~~l~v~~ 97 (158)
..+..+.|.|..
T Consensus 91 ~~~~s~~~~l~V~~ 104 (201)
T 1nkr_A 91 VSAPSDPLDIVIIG 104 (201)
T ss_dssp CCCCCCCEEEEEEC
T ss_pred ccCCCCCEEEEeec
Confidence 223445555554
No 311
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.04 E-value=3.6e-09 Score=67.61 Aligned_cols=81 Identities=28% Similarity=0.320 Sum_probs=58.4
Q ss_pred eeecCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce----eeecCCeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS----LIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
|+.+|..+.+.+|+++.|.|.+.+. +.+.+.|++.. +. .+...+|+........ ...+|.|.+++.+|+|
T Consensus 3 V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~---~~~sL~I~~v~~~DsG 79 (126)
T 3moq_A 3 VDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGS---KSFSLRISDLRVEDSG 79 (126)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTT---TEEEEEECSCCGGGCE
T ss_pred eEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCC---CEEEEEECcCChHhCE
Confidence 4566778889999999999999875 46789999841 21 1223356655433211 1347999999999999
Q ss_pred EEEEEEEcCCC
Q psy16261 75 TYKCNAKNTLG 85 (158)
Q Consensus 75 ~Y~C~a~n~~g 85 (158)
.|.|.+.+..+
T Consensus 80 ~Y~C~~~~~~~ 90 (126)
T 3moq_A 80 TYKCQAFYVFF 90 (126)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEcCC
Confidence 99999988654
No 312
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.04 E-value=8.6e-10 Score=75.62 Aligned_cols=73 Identities=16% Similarity=0.290 Sum_probs=55.2
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
+..+.+.+|+.+.|.|.+.+.|.+.+.|++++ +..+. ...|+.+.... ....|.|.+++.+|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~D 80 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSG-----TTATLTISGAQPED 80 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEET-----TEEEEEETTCCGGG
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeC-----CEEEEEECcCCccc
Confidence 77788999999999999999888899998852 22221 13455554322 12379999999999
Q ss_pred CeEEEEEEEcC
Q psy16261 73 FGTYKCNAKNT 83 (158)
Q Consensus 73 ~G~Y~C~a~n~ 83 (158)
+|.|.|.+.|.
T Consensus 81 ~G~Y~C~~~n~ 91 (212)
T 1nfd_E 81 EAAYYCLSSYG 91 (212)
T ss_dssp CSEEEEEEEET
T ss_pred CEEEEEEEEcc
Confidence 99999999973
No 313
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.04 E-value=1.1e-09 Score=77.64 Aligned_cols=117 Identities=10% Similarity=0.123 Sum_probs=77.8
Q ss_pred EEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC-Cce
Q psy16261 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL-GGS 87 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~-g~~ 87 (158)
..+.+|+.+.|.|.+. |.+.+.| + +..+..... .+.|.|..+..+|.|.|+|.|.|.. |..
T Consensus 108 ~~v~~G~~v~l~C~~~--p~~~i~W--~-g~~~~~~~~-------------~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~ 169 (265)
T 2oz4_A 108 PEVSEGTEVTVKCEAH--PRAKVTL--N-GVPAQPLGP-------------RAQLLLKATPEDNGRSFSCSATLEVAGQL 169 (265)
T ss_dssp SEEETTCEEEEEEECC--TTSEEEE--S-SCSSSCCSS-------------EECCEEECCGGGTTEEEEEEEEEECSSSE
T ss_pred ceecCCCcEEEEEEcc--CCCEEEE--C-CEEccCCCC-------------cEEEEEccccccCCceEEEEEEcCCCCCc
Confidence 3467899999999998 8999999 5 655532210 1258899999999999999998544 665
Q ss_pred E---EEEEEEEeccCCCCCc-----------------------ccch-------------hhhhhhcccccccccCcccc
Q psy16261 88 E---GVIKVYNIGYFGSDTQ-----------------------YVTD-------------EEMQRTNQIARSKWGSERTN 128 (158)
Q Consensus 88 ~---~~~~l~v~~~~~~~~~-----------------------~~~~-------------~~~~~~~~~~~~~~g~~~~~ 128 (158)
. ..+.|.|...+..... +... ..+......+.|.|
T Consensus 170 ~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g~~~~v~~~d~G~Y------ 243 (265)
T 2oz4_A 170 IHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTY------ 243 (265)
T ss_dssp EEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCGGGCEEE------
T ss_pred ccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCCcEEEeehhhCeEE------
Confidence 4 5566666554321100 0000 01112234555666
Q ss_pred eEeeeccCCceEEEEccccCCC
Q psy16261 129 QIARSKWGSGYRYTSGPIRLPD 150 (158)
Q Consensus 129 ~~~~~~~~~g~~~~~~~~~~~~ 150 (158)
.|.+.|..|....+..|.|..
T Consensus 244 -~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 244 -LCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp -EEEEEETTEEEEEEEEEEEEC
T ss_pred -EEEEECCCCcEEEEEEEEEec
Confidence 999999999999988887643
No 314
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.03 E-value=9e-10 Score=67.85 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=57.1
Q ss_pred eEEEecCCCEEEEeEEeecCCC---eeEEEcCCCe------e-ee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 8 LIGARLAAPLTLDCHVESYPKP---ITFWTHENGS------L-IH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~------~-~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
.+.+.+|+++.|.|.+.+.+.+ .+.|++.... . +. ...|+.+.... .....+|.|.++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~---~~~~~sL~I~~v 79 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDL---NKGDVSLIIKNV 79 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCG---GGTBCCEEECSC
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCc---cCCcEeEEEccC
Confidence 4568899999999999876543 4899996211 0 11 11233322110 011236999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy16261 69 SKSDFGTYKCNAKNTLGGSEGVIKVYNI 96 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 96 (158)
+.+|+|.|.|.+.+..+.....+.|.|.
T Consensus 80 ~~~D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 80 TLDDHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp CGGGCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred CChhCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999999987666666666554
No 315
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.03 E-value=1.6e-09 Score=76.44 Aligned_cols=90 Identities=13% Similarity=0.146 Sum_probs=61.9
Q ss_pred eecCceEEEecCCCEEEEeEEeecC-----CCeeEEEcCC-Cee---ee---------cCCeEEEEEeecccceEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP-----KPITFWTHEN-GSL---IH---------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p-----~p~i~W~~~~-~~~---~~---------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
...+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ +.. +. ...|+.+...+ ...+|.
T Consensus 38 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~ 112 (252)
T 3bkj_L 38 TQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSG-----TDFTLR 112 (252)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEE
T ss_pred EeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccC-----CEEEEE
Confidence 3446677899999999999999987 6899999862 111 11 12455444322 123799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCceE-EEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGGSE-GVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.|..+... ..+.|.|..
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 999999999999999998765321 224455543
No 316
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.03 E-value=7.2e-09 Score=72.16 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=55.1
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Cee---e---e-----------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSL---I---H-----------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~---~---~-----------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +.. + . ...|+.+..... ....+|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~ 82 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTS---SSTAYMQ 82 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETT---TTEEEEE
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCC---CCeEEEE
Confidence 45667799999999999999877 6789999862 121 1 1 124555543210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~ 84 (158)
|.+++.+|+|.|.|.+.|..
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~ 102 (227)
T 1mju_H 83 LSSLTSDDSAVYYCANKLGW 102 (227)
T ss_dssp ECSCCGGGCEEEEEEEEETT
T ss_pred ECCCCcccCEEEEEEECCCC
Confidence 99999999999999999863
No 317
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.03 E-value=3.6e-10 Score=78.19 Aligned_cols=72 Identities=14% Similarity=0.234 Sum_probs=52.5
Q ss_pred EecCCCE-EEEeEE-eecCCCeeEEEcCCCeeeecCC----eEEEEEe----ecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 11 ARLAAPL-TLDCHV-ESYPKPITFWTHENGSLIHEGS----RYHMWTE----KFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 11 ~~~g~~v-~l~C~~-~g~p~p~i~W~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
+.+|+.+ .|.|.+ .+.|.|.+.|+++ +..+.... ++.+... ..+.+...+.|.|......|.|.|+|.|
T Consensus 130 ~~~g~~~~~l~C~~~~~~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a 208 (231)
T 2pet_A 130 VMEDSAQEIATCNSRNGNPAPKITWYRN-GQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAA 208 (231)
T ss_dssp TTCCSEEEEEEEEEEEEBSCCEEEEEET-TEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEE
T ss_pred ecCCCceEEEEEEeECcccCCEEEEEEC-CccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEE
Confidence 4477777 999999 8999999999999 77765543 4444322 1133444567888755556699999999
Q ss_pred EcC
Q psy16261 81 KNT 83 (158)
Q Consensus 81 ~n~ 83 (158)
.|.
T Consensus 209 ~n~ 211 (231)
T 2pet_A 209 HYS 211 (231)
T ss_dssp EEE
T ss_pred EcC
Confidence 994
No 318
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.03 E-value=1.9e-09 Score=76.27 Aligned_cols=78 Identities=14% Similarity=0.195 Sum_probs=55.8
Q ss_pred ecCceEEEecCCCEEEEeEEeecCC-CeeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPK-PITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~-p~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
..+..+.+.+|+.+.|.|.+.+.+. +.+.|++.. +..+. ...++.+.... ...+|.|.+++
T Consensus 154 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~ 228 (256)
T 3juy_B 154 QAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG-----TDFTLTITRVE 228 (256)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCC
T ss_pred ecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccC-----CEEEEEECCCC
Confidence 3455667889999999999999886 899998831 11111 12455544322 12369999999
Q ss_pred CCCCeEEEEEEEcCCCc
Q psy16261 70 KSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g~ 86 (158)
.+|+|.|.|.+.|....
T Consensus 229 ~~DsG~Y~C~~~~~~~~ 245 (256)
T 3juy_B 229 PEDFALYYCQVYGASSY 245 (256)
T ss_dssp GGGCSEEEEEECCSSCC
T ss_pred HhHCEEEEEEEeeCCCc
Confidence 99999999999986443
No 319
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.03 E-value=1.4e-09 Score=69.31 Aligned_cols=83 Identities=22% Similarity=0.372 Sum_probs=54.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCCCe---eeecC-----CeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHENGS---LIHEG-----SRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
|..++..+.+.+|+++.|.|.+.+. +.+.+.|++.++. .+... .++..............+|.|.+++.+|
T Consensus 6 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 85 (127)
T 2jju_A 6 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPAD 85 (127)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGG
T ss_pred EEeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHH
Confidence 3445677889999999999999876 5678999997321 12211 2333211000000012369999999999
Q ss_pred CeEEEEEEEcCC
Q psy16261 73 FGTYKCNAKNTL 84 (158)
Q Consensus 73 ~G~Y~C~a~n~~ 84 (158)
+|.|.|.+.|..
T Consensus 86 sG~Y~C~~~~~~ 97 (127)
T 2jju_A 86 AGTYYCVKFRKG 97 (127)
T ss_dssp CEEEEEEEEECC
T ss_pred CEEEEEEEEcCC
Confidence 999999999863
No 320
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.02 E-value=2.8e-09 Score=75.50 Aligned_cols=81 Identities=19% Similarity=0.284 Sum_probs=58.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---ee----------ecCCeEEEEEeecccceEEEEEEEcC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LI----------HEGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~----------~~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
|+..+..+.+.+|+.+.|.|.+.+.|.+.+.|++.. +. .+ ....|+.+..... ....+|.|.+
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~sL~I~~ 82 (256)
T 3tf7_C 6 VTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKS---DSSFHLRKAS 82 (256)
T ss_dssp EECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETT---TTEEEEEESS
T ss_pred EEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCC---CCEEEEEECC
Confidence 445677788999999999999999999999998841 11 11 1123444421110 1134799999
Q ss_pred CCCCCCeEEEEEEEcCCC
Q psy16261 68 LSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g 85 (158)
++.+|+|.|.|.+.|..+
T Consensus 83 v~~~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGT 100 (256)
T ss_dssp CCGGGCSEEEEEEECTTC
T ss_pred CCcccCEEEEEEEecCCC
Confidence 999999999999999765
No 321
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.02 E-value=2.1e-09 Score=76.23 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=60.9
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC-----eeEEEc--CCCeeee------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP-----ITFWTH--ENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p-----~i~W~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
.+..+.+.+|+.+.|.|.+.+.|.+ .+.|++ + +..+. ...++...... ....|.|
T Consensus 127 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~-g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I 200 (256)
T 1nqb_A 127 TPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKP-GQSPKLLIYKVSNRFSGVPDRFSGSGSG-----TDFTLKI 200 (256)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECT-TSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEE
T ss_pred cCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECC-CCCcEEEEEEeCCCCCccCCcEEEEccC-----CEEEEEE
Confidence 3555678899999999999998875 999999 4 43321 12355443221 1247999
Q ss_pred cCCCCCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy16261 66 GSLSKSDFGTYKCNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 97 (158)
.+++.+|+|.|.|.+.|..... ...+.|.|..
T Consensus 201 ~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 201 SRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 9999999999999999864433 2245666654
No 322
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.02 E-value=2e-09 Score=75.05 Aligned_cols=79 Identities=14% Similarity=0.223 Sum_probs=55.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee---------------ecCCeEEEEEeecccceEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI---------------HEGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
|...+..+.+.+|+.+.|.|. .+.|.+.+.|++++ +..+ ....|+.+...... ..+|.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~----~~~L~I 77 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQE----NFSLIL 77 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSS----BCEEEE
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCc----eEEEEE
Confidence 455677788999999999999 78889999999851 1110 01234544431111 137999
Q ss_pred cCCCCCCCeEEEEEEEcCCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+++.+|+|.|.|.+.|..|
T Consensus 78 ~~v~~~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 78 ELATPSQTSVYFCASGDLGQ 97 (238)
T ss_dssp SSCCGGGCEEEEEEEEC---
T ss_pred ecCCcccCeeEEEEEEeCCC
Confidence 99999999999999999865
No 323
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.02 E-value=4.9e-10 Score=77.89 Aligned_cols=80 Identities=13% Similarity=0.136 Sum_probs=56.4
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC----
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG---- 85 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g---- 85 (158)
.+.+|+.+.|.|.+.+.|.+.+.|+|+ +..+... .. . .. ..+.|.|.+++.+|+|.|+|.|.|...
T Consensus 116 ~v~~G~~v~L~C~~~~~~~~~~~W~k~-g~~~~~~-~~-~--~~-----~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 185 (218)
T 1uct_A 116 VLMPGENISLTCSSAHIPFDRFSLAKE-GELSLPQ-HQ-S--GE-----HPANFSLGPVDLNVSGIYRCYGWYNRSPYLW 185 (218)
T ss_dssp EECTTCCCEEEEECSSSCCSEEEEEET-TCSSCCS-EE-E--CS-----SSEEEECCSCCGGGCEEEEEEEECTTSTTEE
T ss_pred ccCCCCCEEEEEeCCCCCCCEEEEEEC-CCccccc-cc-C--CC-----ccCEEEEccCCcccCEEEEEEEEcCCCCCcC
Confidence 578999999999877888889999999 6654331 11 1 11 013799999999999999999998642
Q ss_pred -ceEEEEEEEEeccC
Q psy16261 86 -GSEGVIKVYNIGYF 99 (158)
Q Consensus 86 -~~~~~~~l~v~~~~ 99 (158)
..+..+.|.|.+..
T Consensus 186 s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 186 SFPSNALELVVTDSI 200 (218)
T ss_dssp CCCCCCEEEEEC---
T ss_pred CCCCCcEEEEEecCC
Confidence 22445677776543
No 324
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.02 E-value=3.6e-09 Score=69.06 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=62.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-C---eeee---------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-G---SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
|+..+..+.+.+|+++.|.|.+.+.+...+.|++.. + +.+. ...|+.+.... ...+|.|.++
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~-----~~~sL~I~~l 77 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSG-----TDFTLTISNL 77 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEECSC
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccC-----CEEEEEEccC
Confidence 556677788999999999999988777789999851 1 1121 12456554221 1347999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEeccC
Q psy16261 69 SKSDFGTYKCNAKNTLGGSEGVIKVYNIGYF 99 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 99 (158)
+.+|+|.|.|.+.+........+.|.|....
T Consensus 78 ~~~DsG~Y~C~~~~~~~~fg~gt~L~V~~~~ 108 (143)
T 3u6r_L 78 EPEDFAVYYCQQRSDWVTFGGGTKVEIKAAA 108 (143)
T ss_dssp CGGGCEEEEEEECSSBCEECCCEEEEEC---
T ss_pred cccCCEEEEEEEecCCCEECCCEEEEECCCC
Confidence 9999999999998764122233566666543
No 325
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.01 E-value=2.5e-09 Score=75.58 Aligned_cols=90 Identities=19% Similarity=0.220 Sum_probs=61.5
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC-eeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP-ITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
.+..+.+.+|+.+.|.|.+.+.+.+ .+.|++.. +..+. ...|+...... ...+|.|.+++.
T Consensus 147 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~ 221 (257)
T 3gkz_A 147 SPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSG-----TSYSLTISSMEA 221 (257)
T ss_dssp SCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCG
T ss_pred CCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCC-----CEEEEEECCCCh
Confidence 3455678899999999999998888 99999841 22111 01344443222 124699999999
Q ss_pred CCCeEEEEEEEcCCCceEE-EEEEEEeccC
Q psy16261 71 SDFGTYKCNAKNTLGGSEG-VIKVYNIGYF 99 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~ 99 (158)
+|+|.|.|.+.+....... .+.|.|...+
T Consensus 222 ~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 222 EDAASYFCHQWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECCC-
T ss_pred HHCEEEEEEEccCCceEEcCCEEEEEEeCC
Confidence 9999999999986544322 3566666544
No 326
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.01 E-value=2.6e-10 Score=77.58 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=43.8
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+.+|+.+.|.|.+.+.| +.+.|+|+ +..+........... .......|.|.+++.+|+|.|+|.|.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~~p-~~~~W~k~-g~~~~~~~~~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 110 VVTSGENVTLQCGSRLRF-DRFILTEE-GDHKLSWTLDSQLTP---SGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp -------CEEEEEESSCC-SEEEEEEC----CCEEEEECEECT---TSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cccCCCcEEEEEEcCCCC-CEEEEEcc-CCccccccccccccc---CCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 567899999999999998 89999999 655432111100000 001124799999999999999999999764
No 327
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.01 E-value=8.7e-10 Score=68.60 Aligned_cols=77 Identities=18% Similarity=0.348 Sum_probs=55.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC----CCeeEEEcCC-Ce---eee-c--------CCeEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP----KPITFWTHEN-GS---LIH-E--------GSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p----~p~i~W~~~~-~~---~~~-~--------~~~~~~~~~~~~~~~~~~~l~ 64 (158)
+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +. .+. . ..|+.+.... ...+|.
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~-----~~~~L~ 78 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR-----TDFTLI 78 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEET-----TEEEEE
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccC-----CEEEEE
Confidence 34456677899999999999998876 4689999852 11 111 1 2455554321 123799
Q ss_pred EcCCCCCCCeEEEEEEEcC
Q psy16261 65 IGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.+++.+|+|.|.|.+.+.
T Consensus 79 I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 79 IDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp ESSCCGGGCEEEEEEECSS
T ss_pred ECCCCcccCEEEEEEEecC
Confidence 9999999999999999875
No 328
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.01 E-value=1.4e-09 Score=74.57 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=59.1
Q ss_pred EEecCCCEEEEeEEeecCC---CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 10 GARLAAPLTLDCHVESYPK---PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~---p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
.+.+|+.+.|.|.+.+.++ +.+.|+++ +..+.... +.........+...+.|.|.....+|.|.|+|.|.|..|.
T Consensus 102 ~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~-~~~l~~~~-~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 102 PLEAGKPITVKCSVADVYPFDRLEIDLLKG-DHLMKSQE-FLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp CEETTSCEEEEEEEEEEBSGGGEEEEEEET-TEEEEEEE-CCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred EEcCCCCEEEEEEECCcCCCCCeEEEEEeC-CeECcccc-cccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 3778999999999998644 37899999 76654321 0000000001222345788888888999999999998876
Q ss_pred -------eEEEEEEEEeccC
Q psy16261 87 -------SEGVIKVYNIGYF 99 (158)
Q Consensus 87 -------~~~~~~l~v~~~~ 99 (158)
.+..+.|.|.+.|
T Consensus 180 ~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 180 MDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp CTTSCSEEEEEEECCEECCC
T ss_pred CCCcceeEeeEEEEEEecCC
Confidence 3456777777765
No 329
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.01 E-value=2.1e-09 Score=67.18 Aligned_cols=79 Identities=23% Similarity=0.349 Sum_probs=56.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Cee----eecCCeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSL----IHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. +.. +....|+....... ....+|.|.+++.+|+|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~~~~~DsG 79 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSG---SKSFSLRINDLTVEDGG 79 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETT---TTEEEEEECSCCGGGCE
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCC---CCEEEEEECCCChhhCE
Confidence 45567778899999999999998765 5689999862 111 12235665543211 11347999999999999
Q ss_pred EEEEEEEcC
Q psy16261 75 TYKCNAKNT 83 (158)
Q Consensus 75 ~Y~C~a~n~ 83 (158)
.|.|.+.+.
T Consensus 80 ~Y~C~~~~~ 88 (113)
T 1sq2_N 80 TYRCGLGVA 88 (113)
T ss_dssp EEEEEECBT
T ss_pred EEEEEEEeC
Confidence 999999873
No 330
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.01 E-value=2.1e-09 Score=75.42 Aligned_cols=94 Identities=12% Similarity=0.135 Sum_probs=62.3
Q ss_pred cCceEEEecCCCEEEEeEEeecCCCe-----eEEEcCCCeeee-------cCCeEEEEEee-----cccceEEEEEEEcC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKPI-----TFWTHENGSLIH-------EGSRYHMWTEK-----FSSYKFYMRLYIGS 67 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p~-----i~W~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~l~i~~ 67 (158)
.+..+.+.+|+.+.|.|.+.+.|.+. +.|++++..... .+......... ........+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45666789999999999999988876 999986221100 00100000000 00000123599999
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 68 LSKSDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
++.+|+|.|+|.+.|..+.....+.|.|...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~ 119 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVAS 119 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecC
Confidence 9999999999999998887777777777653
No 331
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.01 E-value=2.4e-09 Score=66.93 Aligned_cols=77 Identities=18% Similarity=0.301 Sum_probs=55.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCC------CeeEEEcCC-C---eeee---------cCCeEEEEEeecccceEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPK------PITFWTHEN-G---SLIH---------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~------p~i~W~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~ 62 (158)
+...|..+.+.+|+.+.|.|.+.+.+. +.+.|++.. + ..+. ...|+.+.... ...+
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~ 78 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSG-----TDFT 78 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEE
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecC-----CEEE
Confidence 345577788999999999999988763 689999852 1 1111 12455554321 1237
Q ss_pred EEEcCCCCCCCeEEEEEEEcC
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.|.+++.+|+|.|.|.+.+.
T Consensus 79 L~I~~v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 79 LTISSLQAEDVAVYYCQQYYS 99 (114)
T ss_dssp EEESSCCGGGCEEEEEEECSS
T ss_pred EEECCCCcccCEEEEEEEeeC
Confidence 999999999999999999875
No 332
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.01 E-value=1.7e-09 Score=82.15 Aligned_cols=81 Identities=12% Similarity=0.164 Sum_probs=59.8
Q ss_pred EEEecCCCEEEEeEEeec-C--CCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCe--EEEEEEEcC
Q psy16261 9 IGARLAAPLTLDCHVESY-P--KPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG--TYKCNAKNT 83 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~-p--~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G--~Y~C~a~n~ 83 (158)
..+.+|+.+.|.|.+.|. | .+.+.|+++ +..+.. ++...... ....+.+ +++.+|.| .|+|.+.|.
T Consensus 198 ~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~-~~~~~~--~~~~~~~~-----~~~~~~~-~v~~~d~G~~~Y~C~a~n~ 268 (450)
T 1z7z_I 198 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALG-DQRLNP--TVTYGNDS-----FSAKASV-SVTAEDEGTQRLTCAVILG 268 (450)
T ss_dssp SEEETTSEEEEEEEEESCTTGGGCEEEEEET-TEECCC--EEEEETTE-----EEEEEEE-ECCGGGCEEEEEEEEEEET
T ss_pred eeEEeCCcEEEEEEeeCCCCCCceEEEEeCC-CEeCCc--eEEecCCc-----eeEEEEE-EeEhhhCCcEEEEEEEccC
Confidence 567899999999999998 7 689999999 766543 22221111 1112233 78999999 999999999
Q ss_pred CCceEEEEEEEEecc
Q psy16261 84 LGGSEGVIKVYNIGY 98 (158)
Q Consensus 84 ~g~~~~~~~l~v~~~ 98 (158)
.|.......|.|...
T Consensus 269 ~g~~~~~~~l~V~~~ 283 (450)
T 1z7z_I 269 NQSQETLQTVTIYSF 283 (450)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CccEEEEEEEEEecC
Confidence 998888888877763
No 333
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.00 E-value=1.1e-10 Score=72.16 Aligned_cols=71 Identities=18% Similarity=0.263 Sum_probs=50.2
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
+..+.. .+.+|++|.|.|.+.+. ...+.|+|+ +..+... ++. .......|.|.+++.+|+|.|.|.+.|
T Consensus 9 ~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~-g~~~~~~-~~~-------~~~~~~~l~I~~v~~~dsG~Y~C~~~n 77 (105)
T 2vsd_A 9 SLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLN-GTLRFDK-EKD-------KEQDAAEFSFAVTNLEDAGTYQCRYQV 77 (105)
T ss_dssp EEESCS-SCCTTCEEEEEEECCSS-CEEEEEEET-TEEEEEE-EEC-------TTCSEEEEEEECCSGGGCEEEEEEEEE
T ss_pred EeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEEC-Cccceee-ecc-------CCCCEEEEEECCCCHHHCeEEEEEEEc
Confidence 344444 47789999999999775 467889999 6654321 110 011124799999999999999999998
Q ss_pred CC
Q psy16261 83 TL 84 (158)
Q Consensus 83 ~~ 84 (158)
..
T Consensus 78 ~~ 79 (105)
T 2vsd_A 78 SE 79 (105)
T ss_dssp ET
T ss_pred CC
Confidence 54
No 334
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.00 E-value=1.9e-09 Score=86.98 Aligned_cols=89 Identities=13% Similarity=0.058 Sum_probs=66.5
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeE-EE--cCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITF-WT--HENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
+..+.+.+|+.+.|.|.+.|.|.|.+. |+ ++ +..+.......+. .....++|.|.++...|.|.|+|.|.|
T Consensus 171 ~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~-g~~l~~~~~~~~~-----~~~~~~~l~I~~~~~~d~g~Y~c~A~n 244 (731)
T 2v5y_A 171 IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGID-VRDAPLKEIKVTS-----SRRFIASFNVVNTTKRDAGKYRCMIRT 244 (731)
T ss_dssp CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESS-SCCEEEEEEEECC-----SSEEEEEEEECSCCTTTCEEEEEEEEE
T ss_pred ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCC-CccccccceEEec-----cccceEEEEEcccccccCeEEEEEEEC
Confidence 345678999999999999999999987 88 66 6665433211111 111235899999999999999999999
Q ss_pred CCCc-eEEEEEEEEeccCC
Q psy16261 83 TLGG-SEGVIKVYNIGYFG 100 (158)
Q Consensus 83 ~~g~-~~~~~~l~v~~~~~ 100 (158)
..|. .+..+.|.|...+.
T Consensus 245 ~~G~~~s~~~~l~V~~~P~ 263 (731)
T 2v5y_A 245 EGGVGISNYAELVVKEPPV 263 (731)
T ss_dssp TTEEEECCCEEEEEECCCC
T ss_pred CCCCcceeeEEEEEecCCC
Confidence 9997 56667777776554
No 335
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.00 E-value=2.3e-09 Score=77.03 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=59.5
Q ss_pred CceEEEecCCCEEEEeEEeecCCCeeEEEc--CCCeeee------------cCCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKPITFWTH--ENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
+..+.+.+|+.+.|.|.+.+.| +.+.|++ + +..+. ...++...... ...+|.|.+++.+
T Consensus 169 p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~-g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~ 241 (282)
T 1qok_A 169 PAIMSASPGEKVTITCSASSSV-SYMHWFQQKP-GTSPKLWIYSTSNLASGVPARFSGSGSG-----TSYSLTISRMEAE 241 (282)
T ss_dssp CSEEEECTTCCEEEEEEESSCC-SCCEEEEECT-TSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGG
T ss_pred CCEEEEcCCCcEEEEEEecCCC-ceEEEEEECC-CCCcEEEEEEecCCCCcccCCeEEecCC-----CEEEEEEccCChh
Confidence 4456688999999999999999 9999999 4 43221 12455443221 1237999999999
Q ss_pred CCeEEEEEEEcCCCce-EEEEEEEEec
Q psy16261 72 DFGTYKCNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 97 (158)
|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 242 DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 242 DAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred HCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 9999999999864433 2345666654
No 336
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.00 E-value=5.5e-09 Score=73.00 Aligned_cols=91 Identities=13% Similarity=0.107 Sum_probs=60.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-------------Ceeeec---CCeEEEEEeecccceEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-------------GSLIHE---GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..++..+.+.+|+.+.|.|.+.+ +.+.+.|++.. +..... ..|+.+..... ..++|.|
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~sL~I 79 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDD----YHSEMNM 79 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTT----SCEEEEE
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCC----CEEEEEE
Confidence 345677788999999999999876 78899999821 111111 13555543221 1247999
Q ss_pred cCCCCCCCeEEEEEEEcC--C-CceEEEEEEEEec
Q psy16261 66 GSLSKSDFGTYKCNAKNT--L-GGSEGVIKVYNIG 97 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~--~-g~~~~~~~l~v~~ 97 (158)
.+++.+|+|.|.|.+.+. . ......+.|.|..
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 114 (240)
T 3q5y_A 80 SALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLE 114 (240)
T ss_dssp CSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEES
T ss_pred CcCChhHCEEEEEEEccCCCcceEEcCCEEEEEec
Confidence 999999999999999832 1 1223345566653
No 337
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.99 E-value=3.3e-09 Score=78.16 Aligned_cols=90 Identities=14% Similarity=0.182 Sum_probs=62.5
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+. ...|+.+..... ...++|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~ 82 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTS---ASTAYVE 82 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETT---TTEEEEE
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecC---CCEEEEE
Confidence 45567799999999999999874 6789999862 22110 124555543210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.|..+.....+.|.|..
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~ 115 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSS 115 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTCEECCCEEEEECS
T ss_pred ECCCCcccCEEEEEEEecCcceecCcEEEEEec
Confidence 999999999999999999655444456676663
No 338
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.99 E-value=3e-09 Score=72.92 Aligned_cols=89 Identities=18% Similarity=0.122 Sum_probs=59.5
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee----------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH----------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
.+..+.+.+|+++.|.|.+.+.| .+.+.|++++ +..+. ...|+.+...... ...+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I 82 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSK---NQYYLDL 82 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGG---TEEEEEE
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCC---CEEEEEE
Confidence 35556789999999999999875 4799998752 11110 1345655432210 1247999
Q ss_pred cCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 66 GSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
.+++.+|+|.|.|.+.|.. .....+.|.|..
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~ 113 (210)
T 3d9a_H 83 NSVTTEDTATYYCANWDGD-YWGQGTLVTVSA 113 (210)
T ss_dssp CSCCGGGCEEEEEEETTSS-CBCCCEEEEECC
T ss_pred CCCCcccCEEEEEEEecCc-ccccceEEEecc
Confidence 9999999999999999864 222234555543
No 339
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.99 E-value=1.4e-10 Score=79.63 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=54.5
Q ss_pred cCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecCCe--EEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 13 LAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEGSR--YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 13 ~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
.|+.+.|.|.+.| .|.+ .+.|+++ +..+..... .......++.+...+.|.|.++..+|.|.|+|.|.|......
T Consensus 126 ~g~~~~l~C~~~g~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 126 TSGGASVVCFLNNFYPKDINVKWKID-GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEET-TEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred CCCcEEEEEEEeeecCCceEEEEEcC-CCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 4889999999988 5665 8999999 877655411 111111223344556899999999999999999999876543
No 340
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.99 E-value=3e-09 Score=75.86 Aligned_cols=92 Identities=16% Similarity=0.243 Sum_probs=64.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC------CCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP------KPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p------~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~ 62 (158)
+...+..+.+.+|+.+.|.|.+.+.| .+.+.|++.. +. .+. ...|+.+.... ...+
T Consensus 8 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~-----~~~~ 82 (264)
T 2gjj_A 8 LTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSG-----TDFT 82 (264)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-----TEEE
T ss_pred eEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCC-----CEEE
Confidence 44567778899999999999999887 6789999852 21 111 13456554321 1247
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCCce-EEEEEEEEecc
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLGGS-EGVIKVYNIGY 98 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 98 (158)
|.|.+++.+|+|.|.|.+.|..+.. ...+.|.|...
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 9999999999999999999875532 22345666544
No 341
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.99 E-value=4.4e-09 Score=74.74 Aligned_cols=89 Identities=11% Similarity=0.118 Sum_probs=59.8
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee------------ecC----CeEEEEEeecccceEEEEEEEc
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI------------HEG----SRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~------------~~~----~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
.++..+.+.+|+++.|.|.+. .+.+.+.|++.. +..+ ... .|+.+.... ...++|.|.
T Consensus 31 ~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~----~~~~sL~I~ 105 (268)
T 3pl6_D 31 QTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPE----GSVSTLKIQ 105 (268)
T ss_dssp CCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTT----SSSEEEEEC
T ss_pred eCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecC----CCEEEEEEC
Confidence 456667899999999999986 578899999821 2111 010 455544321 112479999
Q ss_pred CCCCCCCeEEEEEEEcC--CCceEEEEEEEEec
Q psy16261 67 SLSKSDFGTYKCNAKNT--LGGSEGVIKVYNIG 97 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~ 97 (158)
+++.+|+|.|.|.+.|. .........|.|..
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEec
Confidence 99999999999999984 22333345666654
No 342
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.99 E-value=6.3e-10 Score=75.67 Aligned_cols=85 Identities=18% Similarity=0.267 Sum_probs=60.2
Q ss_pred eEEEecCCCEEEEeEEe----ecCCCeeEEEcCCCeeeec------------CCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 8 LIGARLAAPLTLDCHVE----SYPKPITFWTHENGSLIHE------------GSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~----g~p~p~i~W~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
.+.+.+|+.+.|.|.+. +.|.+.+.|.++ +..+.. ..|..+... + ..+|.|.+++.+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~-~~~i~~~~~~~~~~~~~~~~r~~~~~~--~----~~~L~I~~v~~~ 75 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKE-KKMVLTMMSGDMNIWPEYKNRTIFDIT--N----NLSIVILALRPS 75 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEET-TEEEEEEETTEEEECHHHHTTEEEEST--T----TTEEEECSCCGG
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeC-CcEEEEEeCCceeecCcccceeEEccC--C----CcEEEEecccch
Confidence 45688999999999995 457789999999 665421 112222111 1 127999999999
Q ss_pred CCeEEEEEEEcCCCce-----EEEEEEEEeccC
Q psy16261 72 DFGTYKCNAKNTLGGS-----EGVIKVYNIGYF 99 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~ 99 (158)
|+|.|+|.+.|..|.. ...+.|.|...+
T Consensus 76 D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~ 108 (201)
T 1dr9_A 76 DEGTYECVVLKYEKDAFKREHLAEVTLSVKADF 108 (201)
T ss_dssp GCEEEEEEEEECCTTSCEEEEEEEEEEEEECCC
T ss_pred hCeEEEEEEEcCCCCccccccccEEEEEEcCCC
Confidence 9999999999987654 345667666643
No 343
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.99 E-value=5.3e-09 Score=68.49 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=62.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-C---eeee-c--------CCeEEEEEeecccceEEEEEEEcCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-G---SLIH-E--------GSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~---~~~~-~--------~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
++.++..+.+.+|+++.|.|.+.+.+.+.+.|++.. + ..+. . ..|+...... . ..+|.|.++
T Consensus 19 v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~-~----~~sL~I~~v 93 (146)
T 2yc1_B 19 LTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSG-T----DFTLTISSL 93 (146)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-T----EEEEEESSC
T ss_pred EEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCC-C----EEEEEECCC
Confidence 344566778999999999999988877899999862 1 1221 1 2455554321 1 237999999
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEEEEEecc
Q psy16261 69 SKSDFGTYKCNAKNTLGGS-EGVIKVYNIGY 98 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 98 (158)
+.+|+|.|.|.+.+..... ...+.|.|...
T Consensus 94 ~~~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~ 124 (146)
T 2yc1_B 94 EPEDFAIYYCQQYRYSPRTFGQGTKVEIKRA 124 (146)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred CHHHCEEEEEEEecCCCCeECCCEEEEEeCC
Confidence 9999999999998763322 12356666543
No 344
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.99 E-value=6.1e-10 Score=75.37 Aligned_cols=76 Identities=16% Similarity=0.240 Sum_probs=53.0
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC---c
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG---G 86 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g---~ 86 (158)
.+.+|+.+.|.|.+.+ +.+.+.|+|+ +..+... .. ... ....|.|.+++.+|+|.|+|.|.|... .
T Consensus 109 ~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~--~~--~~~-----~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~ 177 (188)
T 1oll_A 109 EVISGEKVTFYCRLDT-ATSMFLLLKE-GRSSHVQ--RG--YGK-----VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSF 177 (188)
T ss_dssp EEETTCEEEEEEECSS-SCSEEEEEEE-SSSCEEE--EE--ECS-----SEEEEEEEECCGGGCEEEEEECEEETTEECC
T ss_pred ccccCCEEEEEEEcCC-CCCEEEEEEC-Ccccccc--cc--CCC-----ceeEEEECCCCcCCCcEEEEEEEcCCCcCCC
Confidence 4689999999999876 4578999999 6544321 11 111 124799999999999999999998642 1
Q ss_pred eEEEEEEEEe
Q psy16261 87 SEGVIKVYNI 96 (158)
Q Consensus 87 ~~~~~~l~v~ 96 (158)
.+..+.|.|.
T Consensus 178 ~S~~~~l~V~ 187 (188)
T 1oll_A 178 PSEPVKLLVT 187 (188)
T ss_dssp CCCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 2334555553
No 345
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.99 E-value=2.8e-09 Score=75.49 Aligned_cols=78 Identities=26% Similarity=0.316 Sum_probs=55.4
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-C---eeee-------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-G---SLIH-------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~---~~~~-------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
.+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ + ..+. ...|+.+..... ....+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I 82 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTS---KNQVFLKM 82 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETT---TTEEEEEE
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECC---CCEEEEEE
Confidence 34445689999999999999985 6899999851 1 1111 124555543210 01247999
Q ss_pred cCCCCCCCeEEEEEEEcCCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+++.+|+|.|.|.+.|..|
T Consensus 83 ~~v~~~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 83 NSLQTDDTGTYYCTRDLYGG 102 (257)
T ss_dssp ESCCTTCCEEEEEEEESSSS
T ss_pred CCCCcccCEEEEEEEccccc
Confidence 99999999999999999864
No 346
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.98 E-value=5.1e-09 Score=64.88 Aligned_cols=76 Identities=14% Similarity=0.369 Sum_probs=53.4
Q ss_pred CceEEEecCCCEEEEeEEeecC-CCeeEEEcCCC-e----eee-------cCCeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP-KPITFWTHENG-S----LIH-------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~~-~----~~~-------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
|..+.+.+|+++.|.|...+.. .+.+.|++... . .+. ..+|+.+...... ...+|.|.+++.+|
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~---~~~~L~I~~~~~~D 79 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPAN---LSFTVTLENLTEED 79 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGG---TEEEEEESSCCGGG
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcC---CEEEEEEccCCHHH
Confidence 4567789999999999997754 36899998621 1 111 1245555432111 12479999999999
Q ss_pred CeEEEEEEEcCC
Q psy16261 73 FGTYKCNAKNTL 84 (158)
Q Consensus 73 ~G~Y~C~a~n~~ 84 (158)
+|.|.|.+.+..
T Consensus 80 sG~Y~C~~~~~~ 91 (110)
T 2q87_A 80 AGTYWCGVDTPW 91 (110)
T ss_dssp CEEEEEEEECTT
T ss_pred CEEEEEEEecCc
Confidence 999999999885
No 347
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.98 E-value=8.6e-09 Score=71.57 Aligned_cols=78 Identities=17% Similarity=0.281 Sum_probs=55.7
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +..+. ...|+.+..... ....+|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~ 82 (225)
T 1op3_H 6 ESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDL---EDFVYLQ 82 (225)
T ss_dssp EECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETT---TTEEEEE
T ss_pred cCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCC---CCEEEEE
Confidence 34556799999999999999876 6789998752 12110 124555543210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g 85 (158)
|.+++.+|+|.|.|.+.|..|
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 83 MHKMRVEDTAIYYCARKGSDR 103 (225)
T ss_dssp ECSCCGGGCEEEEEEEECCSS
T ss_pred ECCCChhhCEEEEEEEecCCC
Confidence 999999999999999999865
No 348
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.98 E-value=3.6e-09 Score=65.49 Aligned_cols=78 Identities=19% Similarity=0.283 Sum_probs=53.7
Q ss_pred eEEEecCCCEEEEeEEeecCCC-----eeEEEcCCCeee---ec------------CCeEEEEEeecccceEEEEEEEcC
Q psy16261 8 LIGARLAAPLTLDCHVESYPKP-----ITFWTHENGSLI---HE------------GSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 8 ~~~~~~g~~v~l~C~~~g~p~p-----~i~W~~~~~~~~---~~------------~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
.+.+.+|+++.|.|.+.+.|.+ .+.|++.+...+ .. ..|+.... +. .+|.|.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~----~sL~I~~ 75 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDS---DS----WTLRLHN 75 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEET---TT----TEEEECS
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEEC---CC----EEEEEcC
Confidence 3568899999999999876544 489999732111 01 12332221 11 2799999
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEE
Q psy16261 68 LSKSDFGTYKCNAKNTLGGSEGVIK 92 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~~~~~~ 92 (158)
++.+|+|.|.|.+.+..+.....+.
T Consensus 76 v~~~D~G~Y~C~v~~~~~~~~~~~~ 100 (110)
T 1ncn_A 76 LQIKDKGLYQCIIHHKKPTGMIRIH 100 (110)
T ss_dssp CCGGGCEEEEEEEEEECSSSEEEEE
T ss_pred CChHHCEEEEEEEEcCCCCceEEEE
Confidence 9999999999999998776655443
No 349
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.97 E-value=2.8e-09 Score=73.33 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=54.0
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceee---e---------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
|..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+ . ...|+...... ..++|.|.+++.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~ 81 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSG-----TSATLGITGLQT 81 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET-----TEEEEEECSCCG
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccC-----CEEEEEECCCCc
Confidence 6678899999999999954433 5799999852 1111 1 12355544322 124799999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy16261 71 SDFGTYKCNAKNTLG 85 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g 85 (158)
+|+|.|.|.+.|..+
T Consensus 82 ~D~G~Y~C~~~~~~~ 96 (216)
T 2xzc_L 82 GDEADYYCGTWDSSL 96 (216)
T ss_dssp GGCEEEEEEEECTTS
T ss_pred ccCEEEEEEEEeCCC
Confidence 999999999999876
No 350
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.97 E-value=4.6e-10 Score=75.72 Aligned_cols=64 Identities=16% Similarity=0.137 Sum_probs=48.2
Q ss_pred EecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+.+|+.+.|.|.+.+.| +.+.|+|+ +..+....+... . .+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 105 v~~G~~v~l~C~~~~~~-~~~~w~k~-g~~~~~~~~~~~-~--------~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 105 VSSGGDVTLQCQTRYGF-DQFALYKE-GDPAPYKNPERW-Y--------RASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SCCTTCEEEEEECSSCC-CEEEEEEC-CCCTTSCCCCEE-E--------EESSSEEEETTCCSEEEEEEEECTTS
T ss_pred ecCCCcEEEEEEcCCCC-cEEEEEEC-CCcCcceecCCC-c--------eEEEEEccCCccCCeEEEEEEEeCCC
Confidence 45799999999987654 69999999 665543222111 1 12589999999999999999999754
No 351
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.96 E-value=4.6e-09 Score=73.64 Aligned_cols=76 Identities=18% Similarity=0.304 Sum_probs=54.5
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceee-----------------ecCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLI-----------------HEGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ +..+ ....|+.+..... ....+|.|
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I 85 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNS---KNTLYLQM 85 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETT---TTEEEEEE
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCC---CCEEEEEE
Confidence 4557789999999999999987 6789999841 1111 0124565544210 01247999
Q ss_pred cCCCCCCCeEEEEEEEcCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+++.+|+|.|.|.+.|..
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~ 104 (247)
T 2ghw_B 86 NSLRAEDTAVYYCARDRSY 104 (247)
T ss_dssp CSCCGGGCEEEEEEEEETT
T ss_pred CcCCHHHCEEEEEeeeccC
Confidence 9999999999999999973
No 352
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.96 E-value=4.5e-09 Score=74.15 Aligned_cols=89 Identities=18% Similarity=0.260 Sum_probs=60.3
Q ss_pred cCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
.+..+.+.+|+.+.|.|.+.+. +.+.+.|++.+ +. .+. ...|+...... ...+|.|.+++
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~ 82 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG-----TSASLAITGLQ 82 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET-----TEEEEEECSCC
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC-----CEEEEEECCCC
Confidence 4456789999999999999987 78899999841 11 111 12455554332 12479999999
Q ss_pred CCCCeEEEEEEEcCCCce---EEEEEEEEecc
Q psy16261 70 KSDFGTYKCNAKNTLGGS---EGVIKVYNIGY 98 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~~ 98 (158)
.+|+|.|.|.+.|..+.. ...+.|.|...
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 114 (256)
T 3ux9_B 83 SEDEADYYCQVRDNNENEWVFGGGTKLTVLGS 114 (256)
T ss_dssp GGGCEEEEEEEEETTTTEEEECCCEEEEEC--
T ss_pred hhhCEEEEEEEEECCCCceEECCCEEEEEECC
Confidence 999999999999975432 22345555443
No 353
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.96 E-value=1e-09 Score=75.90 Aligned_cols=77 Identities=18% Similarity=0.277 Sum_probs=55.7
Q ss_pred ecCCCEEEEeEEeec-CCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 12 RLAAPLTLDCHVESY-PKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.+|+.+.|.|.+.|. |.| .+.|+++ +..+... ...... ..+.+...+.|.|..+...| |.|+|.|.|..|....
T Consensus 140 ~~g~~v~L~C~~~g~~P~p~~v~W~~~-g~~~~~~-~~~~~~-~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 140 QTNSMVTLGCLVKGYFPEPVTVTWNSG-SLSSGVH-TFPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGG-TBCTTEE-EEEEEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred cCCCcEEEEEEEccEECCCCEEEEecC-CeEcceE-eccccc-cCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 468999999999996 888 9999999 6544221 111111 11245556689999999999 9999999999887654
Q ss_pred EEE
Q psy16261 90 VIK 92 (158)
Q Consensus 90 ~~~ 92 (158)
...
T Consensus 216 ~~~ 218 (222)
T 1q9r_B 216 DKK 218 (222)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 354
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.96 E-value=6e-09 Score=75.51 Aligned_cols=89 Identities=12% Similarity=0.099 Sum_probs=62.8
Q ss_pred ecCceEEEecCCCEEEEeEEeec-------CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESY-------PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~-------p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
+.|+...+..|+.+.|.|.+.+. |.|.+.|+++ +..+... ++.+.... .+.|.|.++.+.+ |.|
T Consensus 9 i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~-g~~i~~~-~~~~~~~~------~~~L~i~~~~~~~-g~Y 79 (303)
T 1i1r_A 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKE-QYTIINRT------ASSVTFTDIASLN-IQL 79 (303)
T ss_dssp EESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEET-TEECCGG-GCEEEETT------EEEEEECSCCCSE-EEE
T ss_pred EccCCceEeCCCCEEEEEEECCccccccCCChhheEEEEC-CEECChh-heeeeCCc------EEEEEEcCcCCCc-eEE
Confidence 45666779999999999999864 7889999999 8776543 44333211 3479999999885 999
Q ss_pred EEEEEcCCCce---EEEEEEEEeccCCCC
Q psy16261 77 KCNAKNTLGGS---EGVIKVYNIGYFGSD 102 (158)
Q Consensus 77 ~C~a~n~~g~~---~~~~~l~v~~~~~~~ 102 (158)
+|.|.+. |.. ...+.|.+..+|..|
T Consensus 80 ~C~a~~~-g~~~~~~~~~~l~v~~~P~~P 107 (303)
T 1i1r_A 80 TCNILTF-GQLEQNVYGITIISGLPPEKP 107 (303)
T ss_dssp EEEEEET-TTEEEEEEEEEEEEECCCCCC
T ss_pred EEecccC-CCcceEEEEEEEeccCCCCCC
Confidence 9999884 433 233455555554443
No 355
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.96 E-value=8.8e-09 Score=72.88 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=60.1
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee---e------------cCCeEEEEEeecccceEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI---H------------EGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~---~------------~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
..+..+.+.+|+.+.|.|.+.+. .+.+.|++.. +..+ . ...++........ ..+|.|.+
T Consensus 142 ~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~----~~~L~I~~ 216 (256)
T 3tf7_C 142 QSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQE----DFFLTLES 216 (256)
T ss_dssp ESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSS----BCEEEESS
T ss_pred ecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCC----eEEEEECC
Confidence 34556667899999999999887 7899999841 1111 1 0123333221111 23799999
Q ss_pred CCCCCCeEEEEEEEcCCCceEE--EEEEEEecc
Q psy16261 68 LSKSDFGTYKCNAKNTLGGSEG--VIKVYNIGY 98 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~~ 98 (158)
++.+|+|.|.|.|.|..|.... .+.|.|...
T Consensus 217 v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~~ 249 (256)
T 3tf7_C 217 ASPSQTSLYFCASSDAPGQLYFGEGSKLTVLEL 249 (256)
T ss_dssp CCGGGCEEEEEEEEEETTEEEECCCEEEEEECG
T ss_pred CCHHHCEEEEEEecCCCCccEECCCeEEEEEcc
Confidence 9999999999999998775533 355666543
No 356
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.96 E-value=3.9e-10 Score=77.33 Aligned_cols=74 Identities=16% Similarity=0.314 Sum_probs=53.5
Q ss_pred cCCCEEEEeEEeec-CCC-eeEEEcCCCeeeecC-C-eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 13 LAAPLTLDCHVESY-PKP-ITFWTHENGSLIHEG-S-RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 13 ~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.|+.+.|.|.+.|. |.+ .+.|+++ +..+... . ........++.+...+.|.|..+..+|.|.|+|.|.|.....
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 125 ATGGASVVCLMNNFYPRDISVKWKID-GTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEET-TEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEEEeEeCCceEEEEEeC-CccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 58899999999984 444 8999999 7766544 1 111111222345556789999999999999999999986644
No 357
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.95 E-value=8.8e-09 Score=64.19 Aligned_cols=77 Identities=16% Similarity=0.313 Sum_probs=55.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-----CCeeEEEcCC-Ce---eee-c--------CCeEEEEEeecccceEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-----KPITFWTHEN-GS---LIH-E--------GSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-----~p~i~W~~~~-~~---~~~-~--------~~~~~~~~~~~~~~~~~~~l 63 (158)
++..|..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +. .+. . ..|+...... ...+|
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-----~~~~L 78 (113)
T 1dlf_L 4 MTQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSG-----TDFTL 78 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEE
T ss_pred EEEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccC-----CEEEE
Confidence 34456778899999999999998766 4789998752 11 121 1 2455544321 12379
Q ss_pred EEcCCCCCCCeEEEEEEEcC
Q psy16261 64 YIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.|.+++.+|+|.|.|.+.+.
T Consensus 79 ~I~~v~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 79 KISRVEAEDLGVYFCSQSTH 98 (113)
T ss_dssp EECSCCGGGCEEEEEEECSS
T ss_pred EECCCChHHCEEEEEEEecC
Confidence 99999999999999999875
No 358
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.95 E-value=6e-09 Score=75.26 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=60.8
Q ss_pred CceEEEecCCCEEEEeEEeecCCC------eeEEEcCC-Ce---eee-c--------CCeEEEEEeecccceEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPKP------ITFWTHEN-GS---LIH-E--------GSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~p------~i~W~~~~-~~---~~~-~--------~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
+..+.+.+|+.+.|.|.+.+.+.+ .+.|+++. +. .+. . ..|+...... ...+|.|.
T Consensus 166 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~ 240 (291)
T 2gki_A 166 PSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSG-----TDFTLTIS 240 (291)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEES
T ss_pred CCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecC-----CEEEEEEC
Confidence 445678899999999999998876 89999862 11 111 1 3455443221 12479999
Q ss_pred CCCCCCCeEEEEEEEcCCCceEE-EEEEEEeccC
Q psy16261 67 SLSKSDFGTYKCNAKNTLGGSEG-VIKVYNIGYF 99 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~ 99 (158)
+++.+|+|.|.|.+.|....... ...|.|...+
T Consensus 241 ~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~~ 274 (291)
T 2gki_A 241 SVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHHH 274 (291)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEECC-
T ss_pred CCCHHHCEEEEEEEccCCceEEcCCEEEEEEeeE
Confidence 99999999999999996433322 3566666654
No 359
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.94 E-value=6.2e-09 Score=73.80 Aligned_cols=79 Identities=20% Similarity=0.288 Sum_probs=56.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceee----e-------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLI----H-------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~----~-------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..+..+.+.+|+.+.|.|.+.+.| .+.+.|++++ +..+ . ...|+.+...... ...+|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~---~~~~L 81 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPS---STAYM 81 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTT---TEEEE
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCC---CEEEE
Confidence 345567799999999999999876 6799999841 2111 0 1245555432100 12479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCC
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.|.+++.+|+|.|.|.+.|..|
T Consensus 82 ~I~~v~~~DsG~Y~C~~~n~~g 103 (256)
T 1nqb_A 82 QLSSLTSEDSAVYYCARYDYYG 103 (256)
T ss_dssp EECSCCGGGCEEEEEEECCTTS
T ss_pred EECcCChhhCEEEEEEEeeccC
Confidence 9999999999999999999866
No 360
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.94 E-value=8.6e-10 Score=86.48 Aligned_cols=86 Identities=23% Similarity=0.342 Sum_probs=65.8
Q ss_pred CceEEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeee------------cCCeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
.+.+.+.+|+.+.|.|.+ .+.|.+.+.|+++ +..+. ...+..+...+ +|.|.+++.+|
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~--------~L~i~~v~~~D 443 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKLN-TGRTEAWKVLSPQGGGPWDSVARVLPNG--------SLFLPAVGIQD 443 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEEE-ETTSSSCEECCSCCSSGGGGTSEECTTS--------CEEESSCCGGG
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEEc-CCeeEEEEecccCCCCCcCCcEEEcCCc--------eEEEecccccc
Confidence 345678899999999999 8889999999998 43211 01233333222 69999999999
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEeccCC
Q psy16261 73 FGTYKCNAKNTLGGS-EGVIKVYNIGYFG 100 (158)
Q Consensus 73 ~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~ 100 (158)
+|.|+|.+.|..|.. ...+.|.|...+.
T Consensus 444 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~ 472 (581)
T 3o3u_N 444 EGIFRCQAMNRNGKETKSNYRVRVYQIPG 472 (581)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEEEBCCC
T ss_pred CeEEEEEEEcCCCceeEEEEEEEEEcCCC
Confidence 999999999999887 6778888876543
No 361
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.94 E-value=7.2e-09 Score=74.26 Aligned_cols=77 Identities=13% Similarity=0.283 Sum_probs=56.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Cee---ee--------------cCCeEEEEEeecccceEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSL---IH--------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~---~~--------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
..++..+.+.+|+.+.|.|.+.+.+.+.+.|++.+ +.. +. ...|+.+.... ...++|.
T Consensus 28 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~----~~~~sL~ 103 (279)
T 2wbj_D 28 SQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHAS----LTLSTLT 103 (279)
T ss_dssp EEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECS----SSEEEEE
T ss_pred EeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCC----CCEEEEE
Confidence 44567788999999999999988888899999862 111 10 12455554321 1234799
Q ss_pred EcCCCCCCCeEEEEEEEcC
Q psy16261 65 IGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.+++.+|+|.|.|.+.|.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDL 122 (279)
T ss_dssp ESSCCGGGCEEEEEEEEET
T ss_pred EccCCccCCEEEEEEEccc
Confidence 9999999999999999994
No 362
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.94 E-value=7.9e-09 Score=74.21 Aligned_cols=79 Identities=18% Similarity=0.263 Sum_probs=56.3
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..+..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+. ...|+.+..... ....+|
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL 107 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTS---SNTAYL 107 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETT---TTEEEE
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecC---CCeEEE
Confidence 345567789999999999998875 5799999862 11110 124555443210 012479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCC
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.|.+++.+|+|.|.|.+.|..|
T Consensus 108 ~I~~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 108 QLSSLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp EECSCCGGGCEEEEEEEECSSS
T ss_pred EECcCChhhCEEEEEEeccCCC
Confidence 9999999999999999999876
No 363
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.94 E-value=3.3e-09 Score=75.10 Aligned_cols=92 Identities=9% Similarity=0.052 Sum_probs=52.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC--Ce--eeec-C-------------CeEEEEEeecccceEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN--GS--LIHE-G-------------SRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--~~--~~~~-~-------------~~~~~~~~~~~~~~~~~~l~ 64 (158)
+..+..+.+.+|+++.|.|.+.+.+.+.+.|++.. .. .+.. . .++...... .....+|.
T Consensus 6 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~~L~ 82 (259)
T 3omz_A 6 EGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGS---TRKNLRMI 82 (259)
T ss_dssp -----CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC-----CCCEEE
T ss_pred ccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecC---CCCeEEEE
Confidence 44567788999999999999999999999999831 11 1100 0 011111111 00123699
Q ss_pred EcCCCCCCCeEEEEEEEcCCCc---eEEEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGG---SEGVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTD 118 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEec
Confidence 9999999999999999998662 23345555555
No 364
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.94 E-value=1e-09 Score=69.58 Aligned_cols=92 Identities=18% Similarity=0.091 Sum_probs=62.3
Q ss_pred cCceEEEecCCCEEEEeEE-eecCCCeeEEEcCCCeeeec-------------CCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHV-ESYPKPITFWTHENGSLIHE-------------GSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
+...+.+.+|+++.|.|.. .......+.|+++....+.. ..|+.+.. ..++|.|.+++.
T Consensus 10 ~~~pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~-------~~~sL~I~nv~~ 82 (121)
T 2edo_A 10 HLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDP-------QSGALYISKVQK 82 (121)
T ss_dssp CCBCCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECT-------TTCCEEESSCCG
T ss_pred CcEEEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeC-------CCceEEEeCCCH
Confidence 4455778999999999987 34445689999873312211 11222220 123799999999
Q ss_pred CCCeEEEEEEEcCCCc-eEEEEEEEEeccCCCCC
Q psy16261 71 SDFGTYKCNAKNTLGG-SEGVIKVYNIGYFGSDT 103 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~ 103 (158)
+|+|.|.|.+.+..+. ....+.|.|....+.|.
T Consensus 83 ~DsG~Y~c~v~~~~~~~~~~~~~L~V~~~~~~P~ 116 (121)
T 2edo_A 83 EDNSTYIMRVLKKTGNEQEWKIKLQVLDPVPKPV 116 (121)
T ss_dssp GGCSEEEEEEEETTTEEEECCEECEEECCSCCCC
T ss_pred HHCeEEEEEEEcCCCcEEEEEEEEEEECCCCCCE
Confidence 9999999999876543 45567888877655543
No 365
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.94 E-value=4.5e-09 Score=79.36 Aligned_cols=80 Identities=16% Similarity=0.282 Sum_probs=59.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCC----eeEEEcCC-Ceee---e---------cCCeEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKP----ITFWTHEN-GSLI---H---------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p----~i~W~~~~-~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
|...+..+.+.+|+.+.|.|.+.+.|.+ .+.|++++ +..+ . ...|+.....+ ..+.|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~ 78 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSR-----TDFTLT 78 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEET-----TEEEEE
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccC-----CcEEEE
Confidence 4455777889999999999999988864 89999862 2211 0 12455554322 124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCc
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
|.+++.+|+|.|+|.+.|..+.
T Consensus 79 I~~v~~~D~G~Y~C~a~n~~~~ 100 (438)
T 1qgc_4 79 IDPVEADDVATYYCQQSNEVPL 100 (438)
T ss_dssp ESSCCGGGCEEEEEEECSSTTC
T ss_pred eCCCcCcCCeeEEEEEecCCCc
Confidence 9999999999999999998764
No 366
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.93 E-value=1.2e-08 Score=71.59 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=62.7
Q ss_pred eecCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce---eee--------------cCCeEEEEEeecccceEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS---LIH--------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~---~~~--------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
...+..+.+.+|+++.|.|.+.+. +.+.+.|++.. +. .+. ...|+.+..... ....+
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~ 81 (242)
T 1hxm_B 5 EQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPE---TSTST 81 (242)
T ss_dssp ECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETT---TTEEE
T ss_pred CcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCC---CcEEE
Confidence 445677889999999999999886 66799999852 11 111 234555543210 01347
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCC-c------eEEEEEEEEecc
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLG-G------SEGVIKVYNIGY 98 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g-~------~~~~~~l~v~~~ 98 (158)
|.|.+++.+|+|.|.|.+.+... . ....+.|.|...
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~ 124 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDK 124 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESS
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEccc
Confidence 99999999999999999998631 1 112356777653
No 367
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.93 E-value=9.4e-10 Score=75.42 Aligned_cols=75 Identities=16% Similarity=0.245 Sum_probs=54.4
Q ss_pred cCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeE-EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 13 LAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRY-HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
.|+.+.|.|.+.|.+++ .+.|+++ +..+..+.+. ......++.+...+.|.|..+..+|.|.|+|.|.|......
T Consensus 129 ~g~~v~L~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 129 STAKATLVCTITDFYPGVVTVDWKVD-GTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEET-TEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEEEEeCCCeEEEEEEC-CEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 58899999999986544 8999999 8777554221 11222223455566899999999999999999999865433
No 368
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.93 E-value=8.4e-10 Score=76.46 Aligned_cols=76 Identities=14% Similarity=0.105 Sum_probs=54.0
Q ss_pred EecCCCEEEEeEEeec---CC-CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESY---PK-PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~---p~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.|. |. +.+.|+++ +..+.............+.+...+.|.|.+++.+|.|.|+|.+.|..+.
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLP 101 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEET-TEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEEC-CccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCC
Confidence 5789999999999987 33 78999999 6555332111111111122334567999999999999999999998765
Q ss_pred e
Q psy16261 87 S 87 (158)
Q Consensus 87 ~ 87 (158)
.
T Consensus 102 ~ 102 (218)
T 2rgs_A 102 S 102 (218)
T ss_dssp S
T ss_pred C
Confidence 4
No 369
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.93 E-value=1.1e-09 Score=79.90 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=64.3
Q ss_pred cCceEEEecCCCEEEEeEEeec-----CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY-----PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCN 79 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~-----p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 79 (158)
.++...+..|+++.|.|.+.+. |.+.+.|+++ +..+.. .++.....+ ...+.|.|.++...|+|.|.|.
T Consensus 6 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~-g~~l~~-~~~~~~~~~----~~~~~L~i~~~~~~d~g~y~c~ 79 (313)
T 2d9q_B 6 SVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLG-AELQPG-GRQQRLSDG----TQESIITLPHLNHTQAFLSCSL 79 (313)
T ss_dssp EESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESS-SCBCTT-CEECCCSSS----CCCEEEEESCCCSSEEEEEEEE
T ss_pred ECCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeC-CEECCc-cceEEEecC----eEEEEEEEeccCCCccceEEee
Confidence 3445568899999999999997 5789999999 776643 322211111 0114799999999999999999
Q ss_pred EEcCCCceEEEEEEEEeccCCCC
Q psy16261 80 AKNTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 80 a~n~~g~~~~~~~l~v~~~~~~~ 102 (158)
+.+..+...+.+.|.+...|..+
T Consensus 80 ~~~~~~~~~~~~~l~v~~~P~~P 102 (313)
T 2d9q_B 80 NWGNSLQILDQVELRAGYPPAIP 102 (313)
T ss_dssp ESSSSEEEEEEEEEEECCCCCCC
T ss_pred ecCCCceeEEEEEEccCCCCCCC
Confidence 87755544556677666655443
No 370
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.93 E-value=1.9e-09 Score=68.39 Aligned_cols=92 Identities=12% Similarity=0.218 Sum_probs=58.9
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC---eeEEEcCCCe----eee---c----------CCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP---ITFWTHENGS----LIH---E----------GSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p---~i~W~~~~~~----~~~---~----------~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+++.|.|.+.+.+.. .+.|+|.+.. .+. . ..|+.+.... ......+|.
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~sL~ 83 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPP--RNPLDGSVL 83 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSS--CCTTBCCEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCC--CcCCEEEEE
Confidence 3556778999999999999876543 5789985211 110 0 1122221111 001123699
Q ss_pred EcCCCCCCCeEEEEEEEc-CCCceEEEEEEEEecc
Q psy16261 65 IGSLSKSDFGTYKCNAKN-TLGGSEGVIKVYNIGY 98 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~ 98 (158)
|.+++.+|+|.|.|.+.+ ..|.....+.|.|.+.
T Consensus 84 I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~ 118 (123)
T 4gjt_B 84 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLEH 118 (123)
T ss_dssp EESCCSSSCSEEEEEEEESSSCEEEEEEEEEC---
T ss_pred ECCCChHHCEEEEEEEEECCCCeEEeEEEEEEEEC
Confidence 999999999999998876 5677778888888765
No 371
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.93 E-value=3.4e-09 Score=77.70 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=62.5
Q ss_pred ecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCCCeeeecC-CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP-KPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
.++..+.+..|+++.|.|.+.+.+ .+.+.|+++ +..+... .++. ...+ .|.|.++...|+|.|+|.+
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~-~~~~~~~~~~~~-~~~~--------~L~i~~v~~~d~G~Y~C~~- 79 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLR-KPAAGSHPSRWA-GMGR--------RLLLRSVQLHDSGNYSCYR- 79 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEE-CSSSSCCCEEEE-EESS--------EEEECSCCGGGCEEEEEES-
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCCCceEEEEEC-CccCCccccccc-cccc--------eEEecccchhhCeEeEEEe-
Confidence 455555567999999999998765 789999998 4433222 2222 1222 6999999999999999993
Q ss_pred cCCCceEEEEEEEEeccCCCC
Q psy16261 82 NTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 82 n~~g~~~~~~~l~v~~~~~~~ 102 (158)
.|.....+.|.|...|..+
T Consensus 80 --~g~~~~~~~L~V~~pP~~P 98 (325)
T 1n26_A 80 --AGRPAGTVHLLVDVPPEEP 98 (325)
T ss_dssp --SSSCSCEEEEEECCCCCCC
T ss_pred --CCEEeeeEEEEeccCCCCC
Confidence 6777778888888766544
No 372
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.92 E-value=8.1e-09 Score=71.32 Aligned_cols=90 Identities=16% Similarity=0.163 Sum_probs=60.1
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Cee---e-e---------------cCCeEEEEEeecccceEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSL---I-H---------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~---~-~---------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +.. + . ...|+.+..... ....+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~ 82 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNS---QSILY 82 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETT---TTEEE
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECC---CCeEE
Confidence 34456789999999999999866 6789999852 111 1 0 024555543210 01247
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCC-----ceEEEEEEEEec
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLG-----GSEGVIKVYNIG 97 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 97 (158)
|.|.+++.+|+|.|.|.+.|..+ .....+.|.|..
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 122 (222)
T 1q9r_B 83 LQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA 122 (222)
T ss_dssp EEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS
T ss_pred EEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEecc
Confidence 99999999999999999999764 222334565554
No 373
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.92 E-value=3e-09 Score=76.09 Aligned_cols=84 Identities=14% Similarity=0.238 Sum_probs=56.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
|......+.+.+|+.+.|.|.+.+. +.|+++ +..+. .+.... . .....+.|.|.+++.+|+|.|+|.|.
T Consensus 3 i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~-~~~~~--~~~~~~--~--~~~~~~~L~i~~~~~~D~G~Y~C~a~ 71 (289)
T 3mjg_X 3 VTPPGPELVLNVSSTFVLTCSGSAP----VVWERM-SQEPP--QEMAKA--Q--DGTFSSVLTLTNLTGLDTGEYFCTHN 71 (289)
T ss_dssp BCSSCSEEECCTTCCEEEEEEESSC----CEEEBT-TBCCS--EEEEEC--T--TSCEEEEEEECSCCGGGCEEEEEECC
T ss_pred ecCCCCeEEEeCCCcEEEEEeccce----EEEECC-CCCcc--cceecc--C--CCceeEEEEEccCChhhCEEEEEEEc
Confidence 3444556778899999999999875 999999 65542 122111 1 11123579999999999999999999
Q ss_pred cCCCc---eEEEEEEEEe
Q psy16261 82 NTLGG---SEGVIKVYNI 96 (158)
Q Consensus 82 n~~g~---~~~~~~l~v~ 96 (158)
|..|. ....+.|.+.
T Consensus 72 n~~g~~~~~~~~~~v~v~ 89 (289)
T 3mjg_X 72 DSRGLETDERKRLYIFVP 89 (289)
T ss_dssp C------CCCEEEEEECC
T ss_pred ccCCCCcCcEEeEEEEEE
Confidence 98876 3445555544
No 374
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.92 E-value=3.5e-09 Score=75.43 Aligned_cols=90 Identities=14% Similarity=0.218 Sum_probs=60.2
Q ss_pred eecCceEEEecCCCEEEEeEEeecC-----CCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP-----KPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p-----~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +. .+. ...|+.+.... ...+|.
T Consensus 19 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~ 93 (268)
T 1x9q_A 19 TQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSG-----TDFTLK 93 (268)
T ss_dssp EEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-----TEEEEE
T ss_pred EeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCC-----CEEEEE
Confidence 4456667788999999999999887 4799999852 11 111 13456554322 123799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCce-EEEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGGS-EGVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 99999999999999999975532 2234555544
No 375
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.92 E-value=1.1e-08 Score=73.23 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=59.0
Q ss_pred ceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Cee---ee--------------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 7 QLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSL---IH--------------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~---~~--------------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ +.. +. ...|+.+..... .....|.|.
T Consensus 142 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~ 218 (276)
T 3auv_A 142 GGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTS---KNTAYLQMN 218 (276)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGG---GTEEEEEEC
T ss_pred CceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCC---CcEEEEEEC
Confidence 445678899999999999877 5899999862 111 10 124555543310 012379999
Q ss_pred CCCCCCCeEEEEEEEcCC---Cce--EEEEEEEEeccC
Q psy16261 67 SLSKSDFGTYKCNAKNTL---GGS--EGVIKVYNIGYF 99 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~---g~~--~~~~~l~v~~~~ 99 (158)
+++.+|+|.|.|.+.|.. +.. ...+.|.|...+
T Consensus 219 ~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~ 256 (276)
T 3auv_A 219 SLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSAS 256 (276)
T ss_dssp SCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC---
T ss_pred CCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEcccc
Confidence 999999999999999973 221 224666666544
No 376
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.92 E-value=6.6e-09 Score=72.88 Aligned_cols=83 Identities=10% Similarity=0.116 Sum_probs=52.8
Q ss_pred ecCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecC------C-eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEc
Q psy16261 12 RLAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEG------S-RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKN 82 (158)
Q Consensus 12 ~~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n 82 (158)
..|+.+.|.|.+.| .|.| .+.|+++ +..+... . ........+..+...+.|.+......|.|.|+|.|.|
T Consensus 131 ~~~~~~~L~C~~~g~~P~pi~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n 209 (248)
T 3pv7_A 131 MKENEDKYMCESSGFYPEAINITWEKQ-TQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRH 209 (248)
T ss_dssp -----CEEEEEEEEEBSSCCEEEEEEE-CSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEEC
T ss_pred ccCCCcEEEEEEccEECCCeEEEEEEC-CccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEEC
Confidence 45778889999999 7988 9999999 6433211 1 0122233334455567899999999999999999999
Q ss_pred CCCce--EEEEEEEE
Q psy16261 83 TLGGS--EGVIKVYN 95 (158)
Q Consensus 83 ~~g~~--~~~~~l~v 95 (158)
..+.. ...+.|.|
T Consensus 210 ~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 210 ASLHTPLRSNFTLTA 224 (248)
T ss_dssp TTCSSCEEEEECC--
T ss_pred CCCCCCcEEEEEEEE
Confidence 98864 44566666
No 377
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.91 E-value=2.3e-09 Score=73.74 Aligned_cols=75 Identities=17% Similarity=0.295 Sum_probs=54.0
Q ss_pred cCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecCCe--EEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 13 LAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEGSR--YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 13 ~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
.|+.+.|.|.+.| .|.| .+.|+++ +..+..... .......++.|...+.|.|..+..+|.|.|+|.|.|......
T Consensus 128 ~g~~v~L~C~~~g~~P~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 128 KSGTASVVCLLNNFYPREAKVQWKVD-NALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEET-TEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCCcEEEEEEEEeEcCCceEEEEEEC-CeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 4889999999998 4554 8999999 776654311 111112223455567899999999999999999999875543
No 378
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.91 E-value=1.6e-08 Score=69.66 Aligned_cols=90 Identities=16% Similarity=0.208 Sum_probs=61.0
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Cee---e-e---------------cCCeEEEEEeecccceEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSL---I-H---------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~---~-~---------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++++ +.. + . ...|+.+..... ....+
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~ 82 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDS---KSSVY 82 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGG---GTEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCC---CCeEE
Confidence 35567789999999999999876 6899999862 111 1 1 024555543210 01237
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCCce-E--EEEEEEEec
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLGGS-E--GVIKVYNIG 97 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g~~-~--~~~~l~v~~ 97 (158)
|.|.+++.+|+|.|.|.+.|..+.. . ..+.|.|..
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 120 (220)
T 1pz5_B 83 LQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS 120 (220)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred EEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEcc
Confidence 9999999999999999999975432 1 235666653
No 379
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.90 E-value=8.5e-10 Score=76.71 Aligned_cols=77 Identities=13% Similarity=0.161 Sum_probs=43.4
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCC-eee---e---------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENG-SLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~-~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
..+..+.+.+|+++.|.|.+.+.|.+.+.|++++. ..+ . ...|+...... ...+|.|.+++.
T Consensus 28 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~ 102 (233)
T 3bqu_C 28 QSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYG-----TDFVFTIENMLS 102 (233)
T ss_dssp EECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEE-----EEEEEC-----C
T ss_pred EcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccC-----CEEEEEECCCCH
Confidence 34566678899999999999999888999988521 111 0 01233222111 234799999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy16261 71 SDFGTYKCNAKNTLG 85 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g 85 (158)
+|+|.|.|.+.|..+
T Consensus 103 ~D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 103 EDVADYYCLQSDNLP 117 (233)
T ss_dssp CCCSEEEEEECSSSS
T ss_pred HHCEEEEEEEecCCc
Confidence 999999999998765
No 380
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.90 E-value=7e-10 Score=76.25 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=51.5
Q ss_pred cCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEE
Q psy16261 13 LAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGV 90 (158)
Q Consensus 13 ~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 90 (158)
.|+.+.|.|.+.+ .|.| .+.|+++ +..+..+.........++.+...+.|.|......|.|.|+|.|.|..+.....
T Consensus 135 ~~~~v~L~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 135 KENKATLVCLISNFSPSGVTVAWKAN-GTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEET-TEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEECcccCCCeEEEEEEC-CEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 4678999999998 5666 8999999 77765432111111112344445568898888889999999999998765544
Q ss_pred E
Q psy16261 91 I 91 (158)
Q Consensus 91 ~ 91 (158)
+
T Consensus 214 ~ 214 (218)
T 3s96_B 214 L 214 (218)
T ss_dssp E
T ss_pred c
Confidence 3
No 381
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.90 E-value=6.4e-10 Score=78.39 Aligned_cols=74 Identities=18% Similarity=0.290 Sum_probs=52.6
Q ss_pred cCCCEEEEeEEeecCC--CeeEEEcCCCeeeecC--CeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 13 LAAPLTLDCHVESYPK--PITFWTHENGSLIHEG--SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~--p~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.|+.+.|.|.+.|.++ +.++|+++ +..+... .+.......++.+...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 168 ~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 168 TSGGASVVCFLNNFYPKDINVKWKID-GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEES-SSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEEecccCCCcEEEEEEC-CCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 4779999999998543 35999999 7766544 1111111222234455689999999999999999999987654
No 382
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.90 E-value=9e-09 Score=65.36 Aligned_cols=91 Identities=18% Similarity=0.265 Sum_probs=58.1
Q ss_pred cCceEEEecCCCEEEEeEEeecCCC----eeEEEcCCC---------------eeeec----CCeEEEEEeeccc-----
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPKP----ITFWTHENG---------------SLIHE----GSRYHMWTEKFSS----- 56 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~p----~i~W~~~~~---------------~~~~~----~~~~~~~~~~~~~----- 56 (158)
.+..+.+.+|+++.|.|.+.+.+.+ .+.|++... ..+.. ..|+.+.......
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~ 87 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTE 87 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCC
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccc
Confidence 3556778899999999999887665 789998621 11111 1233322111000
Q ss_pred -ceEEEEEEEcCCCCCCCeEEEEEEEc-CCCceEEEEEEEE
Q psy16261 57 -YKFYMRLYIGSLSKSDFGTYKCNAKN-TLGGSEGVIKVYN 95 (158)
Q Consensus 57 -~~~~~~l~i~~v~~~d~G~Y~C~a~n-~~g~~~~~~~l~v 95 (158)
-....+|.|.+++.+|+|.|.|.+.+ ..|.....+.|.|
T Consensus 88 ~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 88 AELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp CBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 00023799999999999999998765 5576676666643
No 383
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.90 E-value=4.2e-09 Score=74.29 Aligned_cols=91 Identities=14% Similarity=0.096 Sum_probs=61.1
Q ss_pred eecCceEEEecCCCEEEEeEEeecC--CCeeEEEcC-CCeeee-----------------cCCeEEEEEeecccceEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP--KPITFWTHE-NGSLIH-----------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~-~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++. .+..+. ...|+.+...... ...+
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~ 81 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSS---NTAY 81 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTT---TEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCC---CeEE
Confidence 3456677899999999999998854 779999983 121110 1245555432211 1236
Q ss_pred EEEcCCCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTLGGS-EGVIKVYNI 96 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~ 96 (158)
|.|.+++.+|+|.|.|.+.|..+.. .....|.|.
T Consensus 82 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~ 116 (253)
T 3uzq_A 82 LHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVS 116 (253)
T ss_dssp EEECSCCGGGCEEEEEEECSSSCCEECCCEEEEEC
T ss_pred EEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEe
Confidence 9999999999999999999965544 233455554
No 384
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.90 E-value=1.4e-08 Score=64.99 Aligned_cols=93 Identities=12% Similarity=0.105 Sum_probs=59.5
Q ss_pred cCceEEEecCCCEEEEeEEee-------cCCCeeEEEcCCCe-----eeec-----------CCeEEEEEeecccceEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVES-------YPKPITFWTHENGS-----LIHE-----------GSRYHMWTEKFSSYKFYM 61 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g-------~p~p~i~W~~~~~~-----~~~~-----------~~~~~~~~~~~~~~~~~~ 61 (158)
.+..+.+.+|+.+.|.|.... .....+.|++.... .+.. ..|+.+.... .....
T Consensus 12 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~---~~~~~ 88 (132)
T 1nko_A 12 MQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDP---QTKNC 88 (132)
T ss_dssp ECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCG---GGTBC
T ss_pred CCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCC---CCCce
Confidence 456678999999999999973 34578999987221 1211 1455443211 01123
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCCCce---EEEEEEEEeccCC
Q psy16261 62 RLYIGSLSKSDFGTYKCNAKNTLGGS---EGVIKVYNIGYFG 100 (158)
Q Consensus 62 ~l~i~~v~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~~~~ 100 (158)
+|.|.+++.+|+|.|.|.+.+..... ...+.|.|...+.
T Consensus 89 sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~~ 130 (132)
T 1nko_A 89 TLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTALTH 130 (132)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEECCC-
T ss_pred EEEEcccCcccCeeEEEEEEcCCCcccccCCceEEEecccCC
Confidence 69999999999999999998753111 1246666766543
No 385
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.89 E-value=6.2e-10 Score=76.28 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=56.5
Q ss_pred cCCCEEEEeEEeecC--CCeeEEEcCCCeeeecCCeE-EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 13 LAAPLTLDCHVESYP--KPITFWTHENGSLIHEGSRY-HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p--~p~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.|+.+.|.|.+.|.+ .+.+.|+++ +..+..+... ......++.+...+.|.|..+..+|.|.|+|.|.|..+....
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~ 203 (211)
T 3tv3_L 125 QANKATLVCLISDFYPGAVTVAWKAD-SSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 203 (211)
T ss_dssp HTTCEEEEEEEEEEBSSCCEEEEEET-TEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEE
T ss_pred cCCCeEEEEEeeeecCCCeEEEEEEC-CeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEe
Confidence 499999999999963 478999999 7776542111 111222234555567999999999999999999999876655
Q ss_pred EE
Q psy16261 90 VI 91 (158)
Q Consensus 90 ~~ 91 (158)
.+
T Consensus 204 ~~ 205 (211)
T 3tv3_L 204 TV 205 (211)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 386
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.89 E-value=2.9e-08 Score=64.00 Aligned_cols=90 Identities=17% Similarity=0.221 Sum_probs=62.9
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcC-C-Ceee----ecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHE-N-GSLI----HEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~-~-~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 76 (158)
...+..+.+.+|+.+.|.|.+.+. ...+.|++. . +..+ ....|+...... . ...|.|.+++.+|+|.|
T Consensus 22 ~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~-~----~~~L~I~~~~~~Dsg~Y 95 (134)
T 3kg5_A 22 WQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNE-S----LATLTIQGIRFEDNGIY 95 (134)
T ss_dssp EEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECS-S----EEEEEECSCCTTTCEEE
T ss_pred EEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccC-C----EEEEEECCCCcCcCEEE
Confidence 345666789999999999999875 578999876 1 2221 234677665322 1 34799999999999999
Q ss_pred EEEEEcCCCc---eEEEEEEEEecc
Q psy16261 77 KCNAKNTLGG---SEGVIKVYNIGY 98 (158)
Q Consensus 77 ~C~a~n~~g~---~~~~~~l~v~~~ 98 (158)
.|.+.+..+. ....+.|.|.+.
T Consensus 96 ~C~~~~~~~~~~~fg~GT~L~V~~~ 120 (134)
T 3kg5_A 96 FCQQKCNNTSEVYQGCGTELRVMGF 120 (134)
T ss_dssp EEEEECTTTCCEEECCCEEEEEECC
T ss_pred EEEEEcCCCCceEECCCEEEEEecC
Confidence 9999886321 122456767654
No 387
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.89 E-value=2.1e-09 Score=74.89 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=54.6
Q ss_pred EecCCCEEEEeEEeec-CCC-eeEEEcCCCeeee--cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESY-PKP-ITFWTHENGSLIH--EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.|. |.| .+.|+++ +..+. ...... .. +.|...+.|.|..+..+| |.|+|.|.|..+.
T Consensus 133 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~-g~~~~~~~~~~~~---~~-g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 206 (227)
T 1mju_H 133 DTSGSSVTLGCLVKGYFPEPVTLTWNSG-SLSSGVHTFPAVL---QS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 206 (227)
T ss_dssp -----CEEEEEEEEEEBSSCCEEEEGGG-TBCTTEEECCCEE---ET-TEEEEEEEEEECTTTTTT-SCCEEEEEEGGGT
T ss_pred ccCCCcEEEEEEeecEeCCCeEEEEecC-CCcCCcEECCcee---cC-CeEEEEEEEEEchhhcCC-CeEEEEEEECCCC
Confidence 4579999999999986 777 9999999 65431 111111 11 234455689999998888 9999999998776
Q ss_pred eEEEEEEEEeccCCCC
Q psy16261 87 SEGVIKVYNIGYFGSD 102 (158)
Q Consensus 87 ~~~~~~l~v~~~~~~~ 102 (158)
......+.+...|..+
T Consensus 207 ~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 207 TKVDKKIEPRGPTIKP 222 (227)
T ss_dssp EEEEEECCCCCC----
T ss_pred cceEEEeCCCCCCCCC
Confidence 6666666555554443
No 388
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.89 E-value=1e-08 Score=63.46 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=53.2
Q ss_pred CceEEEecCCCEEEEeE-EeecC-CCeeEEEcCCCeee---e---------cCCeEEEEEeecccceEEEEEEEcCCCCC
Q psy16261 6 SQLIGARLAAPLTLDCH-VESYP-KPITFWTHENGSLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~-~~g~p-~p~i~W~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 71 (158)
|..+.+.+|+++.|.|. +.+.+ .+.+.|++. ...+ . ...|+.+..... ....+|.|.+++.+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~-~~~~~~l~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I~~v~~~ 82 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQ-RSAPITVIYEDNQRPSGVPDRFAGSIDRS---SNSASLTISGLKTE 82 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC--CCCEEEEBTTTBCCTTCCTTEEEEEETT---TTEEEEEECSCCGG
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEE-CCCCcEEEEecCCcCCCCCCcEEEEeccC---CCEEEEEECCCChh
Confidence 66788999999999999 77665 478999987 3211 1 124565543111 11247999999999
Q ss_pred CCeEEEEEEEcC
Q psy16261 72 DFGTYKCNAKNT 83 (158)
Q Consensus 72 d~G~Y~C~a~n~ 83 (158)
|+|.|.|.+.+.
T Consensus 83 DsG~Y~C~~~~~ 94 (109)
T 1pew_A 83 DEADYYCQSYDA 94 (109)
T ss_dssp GCEEEEEEEEET
T ss_pred hCEEEEEEEEeC
Confidence 999999999875
No 389
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.89 E-value=1.6e-08 Score=71.43 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=53.2
Q ss_pred cCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce---ee-------------ecCCeEEEEEeecccceEEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS---LI-------------HEGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~---~~-------------~~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
.+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. +. .+ ....|+.+...... ...+|.|
T Consensus 14 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I 90 (257)
T 3gkz_A 14 ESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSK---NQVYLQL 90 (257)
T ss_dssp EECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGG---TEEEEEE
T ss_pred CCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCC---ceEEEEE
Confidence 3445568899999999999994 47799999841 11 11 01235555433211 1347999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.|.
T Consensus 91 ~~v~~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDS 108 (257)
T ss_dssp CSCCGGGCEEEEEEEECT
T ss_pred CCCChhhCEEEEEEEecC
Confidence 999999999999999997
No 390
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.89 E-value=7.9e-09 Score=71.88 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=54.9
Q ss_pred CceEEEecCCCEEEEeEEeecCC----CeeEEEcCC-Cee---e-e------------cCCeEEEEEeecccceEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPK----PITFWTHEN-GSL---I-H------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~----p~i~W~~~~-~~~---~-~------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
+..+.+.+|+.+.|.|.+.+.|. +.+.|++.+ +.. + . ...|+.+..... ....+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~ 83 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTS---RDMVFMK 83 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETT---TTEEEEE
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCC---CCeEEEE
Confidence 45567899999999999998775 889998752 111 1 1 123555543210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g 85 (158)
|.+++.+|+|.|.|.+.|..|
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 84 ITSVDTADTATYYCARRGFYG 104 (228)
T ss_dssp ECSCCGGGCEEEEEEEEEEST
T ss_pred EcCCCcccCEEEEEEEecCCC
Confidence 999999999999999998765
No 391
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.41 E-value=1.8e-10 Score=71.68 Aligned_cols=78 Identities=21% Similarity=0.262 Sum_probs=55.3
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee------------ecCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI------------HEGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
+..|..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +..+ ....|+.+.... .....+|.|.+++
T Consensus 3 ~Q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~---~~~~~~L~I~~v~ 79 (110)
T 1u3h_A 3 RQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNK---REKKLSLHIADSQ 79 (110)
Confidence 44566778999999999999988888899999862 1111 112344443210 0112479999999
Q ss_pred CCCCeEEEEEEEcC
Q psy16261 70 KSDFGTYKCNAKNT 83 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~ 83 (158)
.+|+|.|.|.+.+.
T Consensus 80 ~~DsG~Y~C~~~~~ 93 (110)
T 1u3h_A 80 PGDSATYFCAASAN 93 (110)
Confidence 99999999999875
No 392
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.88 E-value=1.6e-08 Score=76.39 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=60.2
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+....+.+|+.+.|.|.+.|.| .+.+.|+++. +..+. ...++.+...... ....|.|
T Consensus 225 ~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I 301 (438)
T 1qgc_4 225 SGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAK---NTLYLQM 301 (438)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTT---TEEEEEE
T ss_pred CCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCC---CeEEEEE
Confidence 3445688999999999999988 6799999852 22111 1245555433110 1247999
Q ss_pred cCCCCCCCeEEEEEEEcCCC-----ceEEEEEEEEec
Q psy16261 66 GSLSKSDFGTYKCNAKNTLG-----GSEGVIKVYNIG 97 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 97 (158)
.+++.+|+|.|+|.|.|..+ .....+.|.|..
T Consensus 302 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~ 338 (438)
T 1qgc_4 302 SSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA 338 (438)
T ss_dssp CSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS
T ss_pred CCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec
Confidence 99999999999999999544 222345566654
No 393
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.88 E-value=9.5e-10 Score=75.83 Aligned_cols=78 Identities=17% Similarity=0.258 Sum_probs=51.5
Q ss_pred ecCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 12 RLAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 12 ~~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.+|+.+.|.|.+.| .|.| .+.|+++ +..+......... .. +.+...+.|.|... ..|.|.|+|.|.|..+....
T Consensus 137 ~~g~~v~L~C~~~g~~P~p~~v~W~~~-g~~~~~~~~~~~~-~~-~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~ 212 (219)
T 1c1e_H 137 QTNSMVTLGCLVKGYFPEPVTVTWNSG-SLSSGVHTFPAVL-QS-DLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKV 212 (219)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGG-TBCTTEEECCCEE-SS-SCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEE
T ss_pred ccCCeEEEEEEcccccCCCeEEEEEeC-CcccceEecCCcc-cC-CeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccE
Confidence 46999999999999 8999 9999999 6543110000000 11 23444567888444 44669999999998876554
Q ss_pred EEEE
Q psy16261 90 VIKV 93 (158)
Q Consensus 90 ~~~l 93 (158)
...|
T Consensus 213 ~~~i 216 (219)
T 1c1e_H 213 DKKI 216 (219)
T ss_dssp EEEC
T ss_pred EEec
Confidence 4433
No 394
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.88 E-value=7.9e-11 Score=80.87 Aligned_cols=73 Identities=16% Similarity=0.253 Sum_probs=53.5
Q ss_pred cCCCEEEEeEEeec-CC-CeeEEEcCCCeeeecCCeE-EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 13 LAAPLTLDCHVESY-PK-PITFWTHENGSLIHEGSRY-HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 13 ~g~~v~l~C~~~g~-p~-p~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
+|+.+.|.|.+.|. |. +.+.|+++ +..+...... ......+. +...+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 127 ~g~~v~L~C~~~g~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 127 RTNKATLVCLVNDFYPGSATVTWKAN-GATINDGVKTTKPSKQGQN-YMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp HTTEECCCEEEEEEBSSCCEEEEEET-TEEECSSCBCCCCBCSSSC-EEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred cCCceEEEEEEEeeECCccEEEEEEC-CeEcCCCeecCCceecCCC-ceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 58899999999997 54 79999999 7776544221 11111112 4445679999999999999999999987653
No 395
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.88 E-value=3.4e-09 Score=66.69 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=53.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCCCe---eeec-C----CeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHENGS---LIHE-G----SRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~~---~~~~-~----~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
+..++..+.+.+|+++.|.|.+.+. +.+.+.|+++++. .+.. . .++..............+|.|.+++.+|
T Consensus 10 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 89 (120)
T 2yz1_A 10 VTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPED 89 (120)
T ss_dssp EECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGG
T ss_pred EECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHH
Confidence 3445677889999999999999875 5678999998322 1111 0 1111111000000011369999999999
Q ss_pred CeEEEEEEEcCC
Q psy16261 73 FGTYKCNAKNTL 84 (158)
Q Consensus 73 ~G~Y~C~a~n~~ 84 (158)
+|.|.|.+.+..
T Consensus 90 sG~Y~C~~~~~~ 101 (120)
T 2yz1_A 90 AGTYYCVKFQKG 101 (120)
T ss_dssp CEEEEEEEEECC
T ss_pred CEEEEEEEEcCC
Confidence 999999998764
No 396
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.88 E-value=3.7e-08 Score=59.90 Aligned_cols=87 Identities=22% Similarity=0.378 Sum_probs=62.0
Q ss_pred EEEecCCCEEEEeEEee-cCCCeeEEEcCCCeee-ecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 9 IGARLAAPLTLDCHVES-YPKPITFWTHENGSLI-HEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
..+..|+.+.|.|.+.+ .+.|.++|-|-++... ....+.+...+.+ +. ..-.|.|..+..+|+|.|.|.|.+..|.
T Consensus 21 hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~-N~-s~fvLhf~~V~~sDsGsYRCsAn~~sg~ 98 (120)
T 2aw2_A 21 HSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEK-NI-SFFILHFEPVLPNDNGSYRCSANFQSNL 98 (120)
T ss_dssp EEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECS-SC-EEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecC-Ce-eEEEEEEeeeeEcCCcceEEEeeCCCCc
Confidence 35789999999999999 6899999988745322 1222333333321 11 1225999999999999999999999888
Q ss_pred eE-EEEEEEEec
Q psy16261 87 SE-GVIKVYNIG 97 (158)
Q Consensus 87 ~~-~~~~l~v~~ 97 (158)
.+ .++++.|.+
T Consensus 99 ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 99 IESHSTTLYVTD 110 (120)
T ss_dssp EECCCEEEEEEC
T ss_pred EEeeEEEEEEEe
Confidence 74 456666654
No 397
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.88 E-value=1.8e-08 Score=71.73 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=59.0
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ceee---ec--C----------C-eEEEEEeecccceEEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSLI---HE--G----------S-RYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~~---~~--~----------~-~~~~~~~~~~~~~~~~~l~i 65 (158)
..++..+.+.+|+.+.|.|.+.+ +.+.+.|++.. +... .. . . |+.+.... ....+|.|
T Consensus 31 ~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~sL~I 105 (270)
T 3qib_D 31 IQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPS----NSPCSLEI 105 (270)
T ss_dssp EEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCT----TSCEEEEE
T ss_pred EeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCC----CcEEEEEE
Confidence 34566788999999999999865 77899999831 2111 00 0 0 44443211 11347999
Q ss_pred cCCCCCCCeEEEEEEEcCCC----ceEEEEEEEEec
Q psy16261 66 GSLSKSDFGTYKCNAKNTLG----GSEGVIKVYNIG 97 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g----~~~~~~~l~v~~ 97 (158)
.+++.+|+|.|.|.+.+... .....+.|.|..
T Consensus 106 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 106 QSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp SSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred CCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcc
Confidence 99999999999999997432 222345666665
No 398
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.87 E-value=2.9e-08 Score=68.23 Aligned_cols=77 Identities=26% Similarity=0.323 Sum_probs=54.6
Q ss_pred ecCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Cee---e-------------ecCCeEEEEEeecccceEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GSL---I-------------HEGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~~---~-------------~~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
..+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. +.. + ....|+.+.... ...+|.
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~ 78 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTS-----TTVDLK 78 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECS-----SEEEEE
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeC-----CEEEEE
Confidence 34556678999999999999874 36789998641 111 1 012455554422 234699
Q ss_pred EcCCCCCCCeEEEEEEEcCCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g 85 (158)
|.+++.+|+|.|.|.+.|..+
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~ 99 (215)
T 3nl4_H 79 ITSPTTEDTATYFCVRKYGSE 99 (215)
T ss_dssp ESSCCGGGCEEEEEEEECSSS
T ss_pred ECCCCcccCEEEEEEEecCCC
Confidence 999999999999999998755
No 399
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.87 E-value=3e-08 Score=69.37 Aligned_cols=78 Identities=17% Similarity=0.240 Sum_probs=55.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Cee---ee------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSL---IH------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~---~~------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+...+..+.+.+|+.+.|.|.+. .+.+.+.|++.+ +.. +. ...|+.+.... ...++|.|
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~----~~~~~L~I 76 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPS----QEQFSLIL 76 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCS----SSEEEEEE
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecC----CCEEEEEE
Confidence 45567788899999999999985 467899999862 111 10 12344333211 11347999
Q ss_pred cCCCCCCCeEEEEEEEcCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+++.+|+|.|.|.+.|..
T Consensus 77 ~~v~~~D~G~Y~C~~~~~~ 95 (238)
T 1bec_A 77 ELATPSQTSVYFCASGGGR 95 (238)
T ss_dssp SSCCGGGCEEEEEEEESCT
T ss_pred ecCCcccCEEEEEEEecCC
Confidence 9999999999999999874
No 400
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.87 E-value=3.9e-09 Score=74.57 Aligned_cols=85 Identities=15% Similarity=0.232 Sum_probs=56.2
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCC---Cc
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTL---GG 86 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~---g~ 86 (158)
.+.+|+.+.|.|.+.+. .+.+.|+|+ +..+.. ... ... ....|.|.+++.+|+|.|+|.+.|.. ..
T Consensus 112 ~v~~G~~vtL~C~~~~~-~~~~~w~k~-g~~~~~--~~~--~~~-----~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~ 180 (242)
T 1p6f_A 112 EVISGEKVTFYCRLDTA-TSMFLLLKE-GRSSHV--QRG--YGK-----VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSF 180 (242)
T ss_dssp EEETTCEEEEEEECTTS-CSEEEEEEC-SSSCEE--EEE--ECS-----SEEEEEEEECCGGGCEEEEEEEEEETTEECC
T ss_pred ccCCCCcEEEEEecCCC-CCEEEEEEC-CCccCc--ccc--CCC-----ceEEEEeCCCccccCEEEEEEEECCCCcccC
Confidence 47799999999999764 568999999 654432 111 111 12479999999999999999999864 12
Q ss_pred eEEEEEEEEeccCCCCCcc
Q psy16261 87 SEGVIKVYNIGYFGSDTQY 105 (158)
Q Consensus 87 ~~~~~~l~v~~~~~~~~~~ 105 (158)
.+..+.|.|.+.+..+...
T Consensus 181 ~S~~~~l~V~~~~~~P~l~ 199 (242)
T 1p6f_A 181 PSEPVKLLVTGDIENTSLA 199 (242)
T ss_dssp CCCCEEEEEEC--------
T ss_pred CCCCEEEEEeccCCCCccc
Confidence 3556788888766554443
No 401
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.87 E-value=2.6e-09 Score=74.17 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=54.0
Q ss_pred CceEEEecCCCEEEEeEEeecCC-C-eeEEEcCC-Ceee---e---------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPK-P-ITFWTHEN-GSLI---H---------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~-p-~i~W~~~~-~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
+..+.+.+|+.+.|.|.+.+.+. + .+.|++++ +..+ . ...|+...... ...+|.|.+++.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~ 100 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSG-----TSASLAISGLRS 100 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEET-----TEEEEEEESCCS
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecC-----CeEEEEECCCCH
Confidence 55566889999999999988653 4 69998862 1111 1 12455444321 124799999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy16261 71 SDFGTYKCNAKNTLG 85 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g 85 (158)
+|+|.|.|.+.|..+
T Consensus 101 ~D~G~Y~C~~~~~~~ 115 (234)
T 2j6e_L 101 EDEADYYCATWDDSL 115 (234)
T ss_dssp TTCSEEEEEEEETTT
T ss_pred HHCEEEEEEEEcCCc
Confidence 999999999999877
No 402
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.87 E-value=3.9e-09 Score=72.26 Aligned_cols=72 Identities=14% Similarity=0.156 Sum_probs=50.1
Q ss_pred EecCCCEEEEeEEeec----CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESY----PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~----p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.+. |.|.+.|+++ +..... .+. . ..+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~-~~~~~~-~~~--~--------~~~~L~i~~~~~~~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGN-ALSPLD-PET--T--------RSSELTLTPRPEDHGTNLTCQMKRQGAQ 202 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESS-TTSSSC-SSC--C--------CSSEEEECCCTTCCSCEEEEEEECC---
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCC-CCccCC-CCc--e--------eEEEEEEecccHHcCcEEEEEEEeCCCC
Confidence 4579999999999874 8899999999 543221 111 1 1236999999999999999999998654
Q ss_pred e--EEEEEEE
Q psy16261 87 S--EGVIKVY 94 (158)
Q Consensus 87 ~--~~~~~l~ 94 (158)
. +..+.|.
T Consensus 203 ~~~~~~v~l~ 212 (214)
T 2zg1_A 203 VTTERTVQLN 212 (214)
T ss_dssp -CCEEEEECC
T ss_pred cceEEEEEEE
Confidence 4 4445443
No 403
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.87 E-value=1.1e-08 Score=72.31 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=59.5
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +..+. ...|+.+...... ...+|.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~ 84 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSS---STAYLE 84 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGG---TEEEEE
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCC---CEEEEE
Confidence 34456689999999999999866 6799998741 21110 1245555433211 123699
Q ss_pred EcCCCCCCCeEEEEEEEcC----CCceEEEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNT----LGGSEGVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~----~g~~~~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.|. .+.....+.|.|..
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 85 LRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp ECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred ECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 9999999999999999987 22223345555553
No 404
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.87 E-value=9.8e-09 Score=64.70 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=59.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecC---CCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP---KPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p---~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
..++ .+.+.+|+++.|.|.+.+.+ .+.+.|++.. +. .+. ...|+...... . ..+|.|.
T Consensus 5 ~q~~-~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-~----~~~L~I~ 78 (120)
T 1oaq_L 5 TQES-ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG-N----KAALTIT 78 (120)
T ss_dssp EECS-EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEET-T----EEEEEEE
T ss_pred EcCC-cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCC-C----eEEEEEC
Confidence 3444 47899999999999998775 5689998751 11 111 12456554322 1 2479999
Q ss_pred CCCCCCCeEEEEEEEcCCCce-EEEEEEEEecc
Q psy16261 67 SLSKSDFGTYKCNAKNTLGGS-EGVIKVYNIGY 98 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 98 (158)
+++.+|+|.|.|.+.+..... ...+.|.|...
T Consensus 79 ~~~~~DsG~Y~C~~~~~~~~~fg~gt~L~V~~~ 111 (120)
T 1oaq_L 79 GAQTEDEAIYFCALWYSNHLVFGGGTKLTVLGQ 111 (120)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECC-
T ss_pred CCChhhCeEEEEEEccCCCcEECCCEEEEEcCC
Confidence 999999999999998764311 12346666543
No 405
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.87 E-value=1.2e-08 Score=63.66 Aligned_cols=91 Identities=19% Similarity=0.111 Sum_probs=58.7
Q ss_pred cCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-------Ceeee---------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-------GSLIH---------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-------~~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
.+..+.+.+|+++.|.|..... ....+.|++.. ...+. ..+|+.+... ......+|.|.
T Consensus 3 sp~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~---~~~~~~sL~I~ 79 (115)
T 2or7_A 3 SHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGN---ISEGNVSLTIE 79 (115)
T ss_dssp ---CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSC---GGGTBCCEEES
T ss_pred CccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecC---ccCCeEEEEEc
Confidence 3556779999999999998753 34689999873 11111 1123332211 01112369999
Q ss_pred CCCCCCCeEEEEEEEcCCCceEEEEEEEEecc
Q psy16261 67 SLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGY 98 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 98 (158)
+++.+|+|.|.|.+.+........+.|.|...
T Consensus 80 ~v~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 80 NTVVGDGGPYCCVVEIPGAFHFVDYMLEVKPE 111 (115)
T ss_dssp SCCGGGCEEEEEEECCTTSCEEEEEEEEEESC
T ss_pred cCCHHHCEEEEEEEECCCceeEEEEEEEEcCC
Confidence 99999999999999876554566677776554
No 406
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.87 E-value=1.4e-08 Score=63.58 Aligned_cols=79 Identities=16% Similarity=0.249 Sum_probs=55.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCC-Ce---eee------------cCCeEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHEN-GS---LIH------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~-~~---~~~------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
+...+..+.+.+|+++.|.|.+... +.+.+.|++.. +. .+. ...|+.+..... ....+|.
T Consensus 3 v~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~ 79 (116)
T 1tvd_A 3 VTQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILT---QKAFHLV 79 (116)
T ss_dssp EECCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGG---GTEEEEE
T ss_pred eecCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecC---CCEEEEE
Confidence 3455777889999999999999764 55689998752 11 111 034555543210 1124799
Q ss_pred EcCCCCCCCeEEEEEEEcC
Q psy16261 65 IGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.+++.+|+|.|.|.+.+.
T Consensus 80 I~~~~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 80 ISPVRTEDSATYYCAFTLP 98 (116)
T ss_dssp ESSCCGGGCEEEEEEEECT
T ss_pred EccCChHHCEEEEEEEeCC
Confidence 9999999999999999884
No 407
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.86 E-value=1.1e-09 Score=75.15 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=52.8
Q ss_pred EecCCCEEEEeEEeecC---C-CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESYP---K-PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p---~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.|.+ . ..+.|+++ +..+.............+.+...+.|.|.+++.+|.|.|+|.|.|..+.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVD-DVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEET-TEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEEC-CccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 67899999999999985 2 38999999 5544321100000011122333457999999999999999999998885
Q ss_pred e
Q psy16261 87 S 87 (158)
Q Consensus 87 ~ 87 (158)
.
T Consensus 94 ~ 94 (207)
T 2vol_A 94 A 94 (207)
T ss_dssp S
T ss_pred C
Confidence 4
No 408
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.86 E-value=9.5e-09 Score=63.87 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=54.9
Q ss_pred eecCceEEEecCCCEEEEeEEe-ecCCCeeEEEcCC-Ce---eee----c-----------CCeEEEEEeecccceEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVE-SYPKPITFWTHEN-GS---LIH----E-----------GSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~-~~---~~~----~-----------~~~~~~~~~~~~~~~~~~~ 62 (158)
...+..+.+.+|+.+.|.|.+. +.+.+.+.|++.. +. .+. . ..|+.+.... + ..+
T Consensus 3 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~-~----~~~ 77 (111)
T 2qhl_A 3 IKELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVND-Q----KFD 77 (111)
T ss_dssp CCBCEEEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESS-S----BEE
T ss_pred cCCCceEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcC-C----eEE
Confidence 3456777889999999999998 7777789998741 11 111 0 2455544321 1 237
Q ss_pred EEEcCCCCCCCeEEEEEEEcC
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.|.+++.+|+|.|.|.+.+.
T Consensus 78 L~I~~~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 78 LNIIGTREDDGGEYFCGEVEG 98 (111)
T ss_dssp EEESSCCGGGCEEEEEEEEET
T ss_pred EEECCCChhHCEEEEEEEccC
Confidence 999999999999999999885
No 409
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.85 E-value=8.5e-09 Score=72.82 Aligned_cols=78 Identities=12% Similarity=0.101 Sum_probs=54.8
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Cee---e-ecC-----------C-eEEEEEeecccceEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GSL---I-HEG-----------S-RYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~~---~-~~~-----------~-~~~~~~~~~~~~~~~~~l~ 64 (158)
+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +.. + ... . |+.+.... .. . |.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~---~-L~ 77 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVT--DT---E-LR 77 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCS--SS---C-CE
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCC--CC---e-EE
Confidence 344566788999999999999999889999998731 111 1 000 1 44333322 00 1 99
Q ss_pred EcCCCCCCCeEEEEEEEcCCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g 85 (158)
|.+++.+|+|.|.|.+.+..+
T Consensus 78 I~~v~~~DsG~Y~C~~~~~~~ 98 (253)
T 3to4_D 78 LQVANMSQGRTLYCTSSADHW 98 (253)
T ss_dssp EEEESCSSCEEEEEEEECSCC
T ss_pred EccCChhhCeEEEEEEecCCC
Confidence 999999999999999987644
No 410
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.85 E-value=2.2e-08 Score=69.99 Aligned_cols=83 Identities=13% Similarity=0.211 Sum_probs=54.9
Q ss_pred ecC-CCEEEEeEEeec-CCC-eeEEEc-CCCeeeecCCeEEEEEeecccceEEEEEEEcCCCC--CCCeEEEEEEEcCCC
Q psy16261 12 RLA-APLTLDCHVESY-PKP-ITFWTH-ENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSK--SDFGTYKCNAKNTLG 85 (158)
Q Consensus 12 ~~g-~~v~l~C~~~g~-p~p-~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~--~d~G~Y~C~a~n~~g 85 (158)
..| +.+.|.|.+.+. |.| .++|++ + +..+.....+.... ..+.|...+.|.|..... .|.|.|+|.+.|..+
T Consensus 138 ~~g~~~v~L~C~~~g~~P~p~~v~W~~~~-g~~l~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~ 215 (232)
T 1dn0_B 138 PSDTSSVAVGCLAQDFLPDSITFSWKYKN-NSDISSTRGFPSVL-RGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNG 215 (232)
T ss_dssp ---CCSEEEEEEEEEEBSSCCEEEEEETT-SCEECCEEECCCEE-ETTEEEEEEEEEECTTCC---CCCEEEEEEECTTC
T ss_pred CCCCCcEEEEEEEEEEeCCCeEEEEEcCC-CCceeeEEECCccc-cCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCC
Confidence 367 899999999986 776 999999 7 76654300000000 113455566899998887 789999999999988
Q ss_pred ceEEEEEEEEe
Q psy16261 86 GSEGVIKVYNI 96 (158)
Q Consensus 86 ~~~~~~~l~v~ 96 (158)
.......+.+.
T Consensus 216 ~~~~~~~i~~~ 226 (232)
T 1dn0_B 216 NKEKNVPLPVI 226 (232)
T ss_dssp CEEEEEECCC-
T ss_pred CcceeEecCCC
Confidence 77665555443
No 411
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.85 E-value=4.5e-08 Score=69.76 Aligned_cols=77 Identities=14% Similarity=0.256 Sum_probs=55.2
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. +..+. ...|+.+..... ....+|.
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~ 88 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKS---SSTVYIQ 88 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGG---GTEEEEE
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCC---CCEEEEE
Confidence 35567799999999999999876 6789999862 11110 124555543210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~ 84 (158)
|.+++.+|+|.|.|.+.|..
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~ 108 (261)
T 2xqy_G 89 LSSLTSEDSAVYYCGRLGYV 108 (261)
T ss_dssp ECSCCGGGCEEEEEEEECTT
T ss_pred EcCCCcccCeEEEEEEecCC
Confidence 99999999999999999864
No 412
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.85 E-value=2.8e-08 Score=68.92 Aligned_cols=77 Identities=18% Similarity=0.270 Sum_probs=54.2
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---eee--------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LIH--------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~~--------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +. .+. ...|+.+..... ....+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~I 83 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNS---KNTLYLQM 83 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETT---TTEEEEEE
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCC---CCEEEEEE
Confidence 4566789999999999998876 4789999852 11 110 124555543210 01247999
Q ss_pred cCCCCCCCeEEEEEEEcCCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+++.+|+|.|.|.+.+..|
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~ 103 (223)
T 1dee_B 84 NSLRAEDTAVYYCAKVKFYD 103 (223)
T ss_dssp CSCCGGGCEEEEEEEESSSS
T ss_pred CCCCHHHCEEEEEEEecccc
Confidence 99999999999999998753
No 413
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.84 E-value=1.4e-09 Score=75.63 Aligned_cols=76 Identities=16% Similarity=0.255 Sum_probs=54.4
Q ss_pred cCCCEEEEeEEeec-C-CCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 13 LAAPLTLDCHVESY-P-KPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 13 ~g~~v~l~C~~~g~-p-~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+|+.+.|.|.+.+. | .+.+.|+++ +..+..+. ........++.+...+.|.|.....+|.|.|+|.|.|......
T Consensus 149 ~g~~v~l~C~~~~~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 149 KSGTASVVCLLNNFYPREAKVQWKVD-NALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp HHTEEEEEEEEEEEBSSCCEEEEEET-TEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCCceEEEEEEcccCCCceEEEEEEC-CCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 47789999999984 4 479999999 77665431 1111122223455566799999999999999999999876544
Q ss_pred E
Q psy16261 89 G 89 (158)
Q Consensus 89 ~ 89 (158)
.
T Consensus 228 ~ 228 (237)
T 3sob_L 228 V 228 (237)
T ss_dssp E
T ss_pred e
Confidence 3
No 414
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.84 E-value=3.2e-08 Score=62.67 Aligned_cols=78 Identities=28% Similarity=0.464 Sum_probs=55.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce----eeecCCeEEEEEeecccceEEEEEEEcCCCCCCCe
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS----LIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 74 (158)
++..+..+.+.+|+++.|.|.+.+.. .+.+.|++.. +. .+....|+........ ...+|.|.+++.+|+|
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~---~~~~L~I~~~~~~DsG 79 (121)
T 2i24_N 3 VDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGS---KSFSLRINDLTVKDSG 79 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTT---TEEEEEECSCCGGGCE
T ss_pred cEECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCC---CEEEEEECCCChhhCE
Confidence 44557778899999999999997753 4589999862 11 1223356654432111 1347999999999999
Q ss_pred EEEEEEEc
Q psy16261 75 TYKCNAKN 82 (158)
Q Consensus 75 ~Y~C~a~n 82 (158)
.|.|.+..
T Consensus 80 ~Y~C~~~~ 87 (121)
T 2i24_N 80 TYRCKPES 87 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 99999875
No 415
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.84 E-value=2e-09 Score=73.74 Aligned_cols=74 Identities=19% Similarity=0.277 Sum_probs=53.3
Q ss_pred cCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 13 LAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.|+.+.|.|.+.|.+++ .+.|+++ +..+..+. .........+.+...+.|.|......|.|.|+|.|.|.....
T Consensus 126 ~~~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 126 GTGSATLVCFVNNFYPKDINVKWKVD-GSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCEEEEEEET-TEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred CCCCcEEEEEEeeecCCceEEEEEEC-CcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 57789999999987653 8999999 87775431 111122222445556678999888889999999999986443
No 416
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.84 E-value=1.4e-08 Score=68.93 Aligned_cols=63 Identities=19% Similarity=0.258 Sum_probs=46.3
Q ss_pred cCC-CEEEEeEEeec-CCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCC-CCeEEEEEEEcCCCceEE
Q psy16261 13 LAA-PLTLDCHVESY-PKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKS-DFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 13 ~g~-~v~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~-d~G~Y~C~a~n~~g~~~~ 89 (158)
.|. .+.|.|.+.+. |.|.+.|+++ +..+..+. .|.|...... |.|.|+|.|.|.+|..+.
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~~-g~~l~~~~----------------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEAL-GNTLSSQP----------------NLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEET-TEEEESSS----------------EEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred CCCceEEEEEEEecCCCceEEEEEeC-CEEcCCCC----------------eEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 344 79999999995 5789999999 76553322 3555444444 899999999999998765
Q ss_pred EEE
Q psy16261 90 VIK 92 (158)
Q Consensus 90 ~~~ 92 (158)
.+.
T Consensus 185 ~~~ 187 (193)
T 2if7_A 185 SVS 187 (193)
T ss_dssp EEE
T ss_pred ccc
Confidence 543
No 417
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.83 E-value=4.6e-08 Score=67.68 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=60.6
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---eee--------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LIH--------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~~--------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. +. .+. ...|+.+..... ....+|.
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~ 82 (220)
T 2fbj_H 6 ESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNA---KNSLYLQ 82 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSS---SCEEEEE
T ss_pred cCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCC---CCEEEEE
Confidence 34557799999999999998876 5789998752 11 111 124565553210 1124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCCc---eEEEEEEEEec
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLGG---SEGVIKVYNIG 97 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 97 (158)
|.+++.+|+|.|.|.+.+..+. ....+.|.|..
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 9999999999999999987553 12234666654
No 418
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.83 E-value=2.1e-09 Score=73.74 Aligned_cols=72 Identities=18% Similarity=0.304 Sum_probs=52.2
Q ss_pred ecCCCEEEEeEEeec-CCC-eeEEEcCCCeeee--cCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 12 RLAAPLTLDCHVESY-PKP-ITFWTHENGSLIH--EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.+|+.+.|.|.+.|. |.| .+.|+++ +..+. ..... . .. +.+...+.|.|..+..+| |.|+|.|.|..|..
T Consensus 131 ~~g~~v~L~C~~~g~~P~p~~v~W~~~-~~~~~~~~~~~~--~-~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 204 (210)
T 3d9a_H 131 QTNSMVTLGCLVKGYFPEPVTVTWNSG-SLSSGVHTFPAV--L-QS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 204 (210)
T ss_dssp CCSSEEEEEEEEEEEBSSCCEEEEGGG-TBCTTEEECCCE--E-ET-TEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTE
T ss_pred ccCCcEEEEEEEeeEecCCcEEEEeeC-CcccceEEcCCc--c-CC-CcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 478999999999997 888 9999998 55321 11111 1 11 234445679999988877 99999999998876
Q ss_pred EE
Q psy16261 88 EG 89 (158)
Q Consensus 88 ~~ 89 (158)
..
T Consensus 205 ~~ 206 (210)
T 3d9a_H 205 KV 206 (210)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 419
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.82 E-value=2.8e-08 Score=61.78 Aligned_cols=76 Identities=18% Similarity=0.298 Sum_probs=53.3
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee---------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH---------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +. .+. ...|+.+...... ...+|.|.+++
T Consensus 4 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~~~ 80 (112)
T 2z35_A 4 TQTGGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEA---TSFHLQKASVQ 80 (112)
T ss_dssp ECSCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTT---TBCCEEESSCC
T ss_pred EeCCCcEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 44567788999999999999988777899998752 11 111 0134444311101 12369999999
Q ss_pred CCCCeEEEEEEE
Q psy16261 70 KSDFGTYKCNAK 81 (158)
Q Consensus 70 ~~d~G~Y~C~a~ 81 (158)
.+|+|.|.|.+.
T Consensus 81 ~~DsG~Y~C~~~ 92 (112)
T 2z35_A 81 ESDSAVYYCALS 92 (112)
T ss_dssp STTCSEEEEEEE
T ss_pred hhhCEEEEEEEE
Confidence 999999999998
No 420
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.82 E-value=2.1e-08 Score=70.37 Aligned_cols=73 Identities=15% Similarity=0.226 Sum_probs=52.1
Q ss_pred ceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 7 QLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
....+.+|+.+.|.|.+.+.+ .+.+.|+++. +..+. ...|+.+..... ....+|.|.
T Consensus 139 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~ 215 (250)
T 3esu_F 139 GPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKS---SSTAYMQLS 215 (250)
T ss_dssp CCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGG---GTEEEEEEC
T ss_pred CceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCC---CCeEEEEEC
Confidence 445688999999999999877 7899999861 11110 114555543321 112469999
Q ss_pred CCCCCCCeEEEEEEEc
Q psy16261 67 SLSKSDFGTYKCNAKN 82 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n 82 (158)
+++.+|+|.|.|.+.+
T Consensus 216 ~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 216 SLTSVDSAVYFCARSG 231 (250)
T ss_dssp SCCGGGCEEEEEEEEC
T ss_pred CCCcccCEEEEEEEec
Confidence 9999999999999997
No 421
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.82 E-value=3.5e-09 Score=73.05 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=54.0
Q ss_pred EecCCCEEEEeEEeec-CCC-eeEEEcCCCeee--ecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESY-PKP-ITFWTHENGSLI--HEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.|. |.| .+.|+++ +... ....... .. +.+...+.|.|..+..+| |.|+|.|.|..|.
T Consensus 137 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~-~~~~~~~~~~~~~---~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 210 (220)
T 1pz5_B 137 DTSGSSVTLGCLVKGYFPEPVTVKWNYG-ALSSGVRTVSSVL---QS-GFYSLSSLVTVPSSTWPS-QTVICNVAHPASK 210 (220)
T ss_dssp CSCSSSEEEEEEEEEEBSSCCEEEEGGG-TCCTTEEECCCEE---ET-TEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEEecC-CcccceEEcCCcc---cC-CeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence 3479999999999997 888 9999998 4421 0111110 11 234445679999988866 9999999999997
Q ss_pred eEEEEE
Q psy16261 87 SEGVIK 92 (158)
Q Consensus 87 ~~~~~~ 92 (158)
....+.
T Consensus 211 ~~~~~~ 216 (220)
T 1pz5_B 211 VDLIKE 216 (220)
T ss_dssp EEEEEE
T ss_pred Eeeeec
Confidence 666554
No 422
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.82 E-value=3.2e-08 Score=61.91 Aligned_cols=78 Identities=19% Similarity=0.330 Sum_probs=54.5
Q ss_pred eeecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCC-Ce---eee--c--------CCeEEEEEeecccceEEEEEEEc
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHEN-GS---LIH--E--------GSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~-~~---~~~--~--------~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
++..+..+.+.+|+++.|.|.+.+. +.+.+.|++.. +. .+. . ..|+.+..... ....+|.|.
T Consensus 3 v~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I~ 79 (116)
T 1fo0_A 3 VTQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKP---KSSIGLIIT 79 (116)
T ss_dssp EECCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGG---GTEEEEEEC
T ss_pred cCcCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCC---CCEEEEEEC
Confidence 3455677889999999999999876 55689998752 11 110 0 13555532111 113479999
Q ss_pred CCCCCCCeEEEEEEEc
Q psy16261 67 SLSKSDFGTYKCNAKN 82 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n 82 (158)
+++.+|+|.|.|.+.+
T Consensus 80 ~~~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 80 ATQIEDSAVYFCAMRG 95 (116)
T ss_dssp SCCGGGCEEEEEEEEC
T ss_pred CCChhhCEEEEEEEEc
Confidence 9999999999999987
No 423
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.82 E-value=2.6e-09 Score=73.18 Aligned_cols=68 Identities=16% Similarity=0.333 Sum_probs=50.6
Q ss_pred cCCCEEEEeEEee-cCCCeeEEEcCCCeeeecCC--eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEE
Q psy16261 13 LAAPLTLDCHVES-YPKPITFWTHENGSLIHEGS--RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAK 81 (158)
Q Consensus 13 ~g~~v~l~C~~~g-~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 81 (158)
+|+.+.|.|.+.+ .|.|.+.|+++ +..+..+. ........+..+...+.|.|..+..+|.|.|+|.|.
T Consensus 128 ~g~~v~l~C~~~g~~P~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 128 ATGTVTIVCVANKYFPDVTVTWEVD-GTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTSEEEEEEEEEEEBSCCEEEEEET-TEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCCcEeEEEEEecccCCcEEEEEeC-CccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 5899999999999 89999999999 77664321 111111112344455689999999999999999999
No 424
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.82 E-value=4.4e-09 Score=72.55 Aligned_cols=80 Identities=11% Similarity=0.075 Sum_probs=56.2
Q ss_pred ecCCCE-EEEeEEe-ecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 12 RLAAPL-TLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 12 ~~g~~v-~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
..|+.+ .|.|.+. +.|.|.++|+++ +....... .........+...+.|.|..+...|.|.|+|.|.|..+....
T Consensus 128 ~~g~~~~~l~C~~~~g~P~p~v~W~k~-~~~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~ 204 (221)
T 3eow_R 128 LTGEPVPMARCVSTGGRPPAQITWHSD-LGGMPQTS--QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQ 204 (221)
T ss_dssp CCSSSCCEEEEEEESCSSCCCEEEECS-SSCCCCCE--EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCE
T ss_pred cCCceEEEEEEECCCccCCCeeEEEeC-CCCCCccc--eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCe
Confidence 457778 5999987 899999999987 43322211 111112234455678999999999999999999999877655
Q ss_pred EEEEE
Q psy16261 90 VIKVY 94 (158)
Q Consensus 90 ~~~l~ 94 (158)
.+.|.
T Consensus 205 ~~~v~ 209 (221)
T 3eow_R 205 LLTVS 209 (221)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 55543
No 425
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.81 E-value=2.3e-07 Score=58.79 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=61.6
Q ss_pred cCceEEEecCCCEEEEeEEeecCC-CeeEEEcCCC----ee-eec--------CCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYPK-PITFWTHENG----SL-IHE--------GSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p~-p~i~W~~~~~----~~-~~~--------~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
.+..+.+.+|+.+.|.|...+... ..+.|++... .. +.. .+|+.+..... ....+|.|.+++.
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~---~~~~sL~I~~l~~ 84 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQK---NRTFTVTMEDLMK 84 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETT---TTEEEEEECSCCG
T ss_pred cccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCc---CCEEEEEEeCCCH
Confidence 345677899999999999876543 3689998621 11 111 13444432211 1134799999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEeccCCCC
Q psy16261 71 SDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 102 (158)
+|+|.|.|.+..........+.|.|...+..+
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~v~L~V~~~~~~~ 116 (124)
T 2nms_A 85 TDADTYWCGIEKTGNDLGVTVQVTIDPAPVTQ 116 (124)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred HHCEEEEEEEEcCCCCccEEEEEEEeCCCcCC
Confidence 99999999998764434556777777765443
No 426
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.81 E-value=6.9e-08 Score=68.22 Aligned_cols=76 Identities=18% Similarity=0.287 Sum_probs=52.8
Q ss_pred cCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce---ee-e-------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS---LI-H-------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~---~~-~-------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+++.|.|.+.+. +...+.|++.. +. .+ . ...|+.+..... ....+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~ 82 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNA---KNTLFLQ 82 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGG---GTEEEEE
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCC---CCEEEEE
Confidence 3456678999999999999873 35689998741 11 11 0 124555543321 1234799
Q ss_pred EcCCCCCCCeEEEEEEEcC
Q psy16261 65 IGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.+++.+|+|.|.|.+.|.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~ 101 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPA 101 (253)
T ss_dssp ECSCCGGGCEEEEEEECCB
T ss_pred ECCCChhhCEEEEEEEecC
Confidence 9999999999999999885
No 427
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.81 E-value=9e-08 Score=59.72 Aligned_cols=79 Identities=16% Similarity=0.316 Sum_probs=53.3
Q ss_pred eeecCceEEEecCCCEEEEeEEeec---CCCeeEEEcCC-C---eeeec-------------CCeEEEEEeecccceEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY---PKPITFWTHEN-G---SLIHE-------------GSRYHMWTEKFSSYKFYM 61 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~---p~p~i~W~~~~-~---~~~~~-------------~~~~~~~~~~~~~~~~~~ 61 (158)
++.++ .+.+.+|+.+.|.|.+... +...+.|++.. + ..+.. ..|+...... . ....
T Consensus 2 v~q~~-~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-~--~~~~ 77 (116)
T 3bj9_1 2 LHQPP-AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDV-A--RNRG 77 (116)
T ss_dssp EECCS-EEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEG-G--GTEE
T ss_pred EecCC-cEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecC-C--CceE
Confidence 34444 5789999999999999754 45689998752 1 11110 1344443321 0 1134
Q ss_pred EEEEcCCCCCCCeEEEEEEEcCC
Q psy16261 62 RLYIGSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 62 ~l~i~~v~~~d~G~Y~C~a~n~~ 84 (158)
+|.|.+++.+|+|.|.|.+.+..
T Consensus 78 sL~I~~~~~~DsG~Y~C~~~~~~ 100 (116)
T 3bj9_1 78 YLSISELQPEDEAMYYCAMGARS 100 (116)
T ss_dssp EEEECSCCGGGCEEEEEEECCSS
T ss_pred EEEECCCChhHCEEEEEEEeCCC
Confidence 79999999999999999998753
No 428
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.81 E-value=3.3e-08 Score=68.11 Aligned_cols=89 Identities=20% Similarity=0.186 Sum_probs=59.4
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Cee----ee------------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSL----IH------------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~----~~------------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ +.. +. ...|+.+..... ...++|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I~ 83 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTS---KSQVFLKMN 83 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETT---TTEEEEEES
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCC---CceEEEEEC
Confidence 4556789999999999998865 4789998752 111 11 124555543210 012479999
Q ss_pred CCCCCCCeEEEEEEEcCCCc---eEEEEEEEEec
Q psy16261 67 SLSKSDFGTYKCNAKNTLGG---SEGVIKVYNIG 97 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 97 (158)
+++.+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~ 117 (215)
T 1c5d_H 84 SLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSS 117 (215)
T ss_dssp SCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECS
T ss_pred CCCcccCEEEEEEEecCCcccceEcCCEEEEecC
Confidence 99999999999999987432 12235666653
No 429
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.81 E-value=2.7e-08 Score=70.24 Aligned_cols=77 Identities=16% Similarity=0.272 Sum_probs=54.2
Q ss_pred ecCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. +..+. ...|+.+...... ...+|
T Consensus 11 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~---~~~~L 87 (256)
T 3juy_B 11 VQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSA---NTAYM 87 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTT---TEEEE
T ss_pred EecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCC---CEEEE
Confidence 34566778999999999999883 67799999641 11100 0135555432211 12469
Q ss_pred EEcCCCCCCCeEEEEEEEcC
Q psy16261 64 YIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.|.+++.+|+|.|.|.+.|.
T Consensus 88 ~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 88 ELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp EECSCCGGGCEEEEEEECCC
T ss_pred EECCCCcccCEEEEEeEEec
Confidence 99999999999999999996
No 430
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.81 E-value=1.6e-08 Score=68.87 Aligned_cols=66 Identities=18% Similarity=0.226 Sum_probs=46.2
Q ss_pred EEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+.+|+.+.|.|.+.+ +.+.+.|+|+ +..+...........+ .....|.|.+++ |+|.|+|.|.+.
T Consensus 118 ~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~----~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 118 TVLAGENVTLSCSSRS-SYDMYHLSRE-GEAHERRLPAGPKVNG----TFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EECTTCEEEEEEEESS-CCSEEEEEET-TCSSCEEEECEEEETT----EEEEEEEEEECC--SCEEEEEEEEET
T ss_pred ccCCCCeEEEEEeCCC-CCceEEEEEC-CcccCcccccccccCC----ceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 4778999999999986 5689999999 6544322111111100 012479999998 999999999865
No 431
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.81 E-value=1.9e-08 Score=69.72 Aligned_cols=78 Identities=13% Similarity=0.231 Sum_probs=54.4
Q ss_pred ecCCCEEEEeEEeec-CCC-eeEEEc-CCCeeeecCCeEEEEEeecccceEEEEEEEcCCCC--CCCeEEEEEEEcCCCc
Q psy16261 12 RLAAPLTLDCHVESY-PKP-ITFWTH-ENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSK--SDFGTYKCNAKNTLGG 86 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~-p~p-~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~--~d~G~Y~C~a~n~~g~ 86 (158)
.+|+.+.|.|.+.+. |.| .++|++ + +..+.....+... ...+.|...+.|.|..... .|.|.|+|.+.|..+.
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~-g~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKN-NSDISSTRGFPSV-LRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETT-SCBCSCEEECCCE-EETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccC-CCccceeEECCcc-ccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 478899999999997 777 999999 7 6665330000000 0113444556799988776 7899999999999887
Q ss_pred eEEEE
Q psy16261 87 SEGVI 91 (158)
Q Consensus 87 ~~~~~ 91 (158)
....+
T Consensus 217 ~~~~~ 221 (223)
T 1dee_B 217 KEKDV 221 (223)
T ss_dssp EEEEE
T ss_pred Ccccc
Confidence 65543
No 432
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.80 E-value=2.4e-08 Score=71.15 Aligned_cols=87 Identities=14% Similarity=0.148 Sum_probs=55.9
Q ss_pred ecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
..+. ..+.+|+++.|.|.+.+ +.+.+.|+|+ +..+..... .. ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 12 ~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~-g~~~~~~~~---~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 84 (257)
T 1b6u_A 12 AHPG-PLVKSEETVILQCWSDV-RFQHFLLHRE-GKFKDTLHL---IG-EHHDGVSKANFSIGPMMQDLAGTYRCYGSVT 84 (257)
T ss_dssp CBSC-SEEESSCCEEEEEEESS-CCSEEEEEEE-STTCEEEEE---EC-BCCTTCEEEEEEECSCCTTTCEEEEEEEECS
T ss_pred EcCC-CEecCCCCEEEEEecCC-CCcEEEEEEC-CCCCCccee---ee-eccCCCceEEEEeecCCcccCEEEEEeEecc
Confidence 3444 45789999999999975 5678999999 543321100 00 0000112347999999999999999999864
Q ss_pred CC-----ceEEEEEEEEec
Q psy16261 84 LG-----GSEGVIKVYNIG 97 (158)
Q Consensus 84 ~g-----~~~~~~~l~v~~ 97 (158)
.. ..+..+.|.|.+
T Consensus 85 ~~~~~~s~~S~~~~L~V~~ 103 (257)
T 1b6u_A 85 HSPYQLSAPSDPLDIVITG 103 (257)
T ss_dssp SCTTSCCCCCCCEEEEEEC
T ss_pred CCCccccccCCCEEEeccc
Confidence 21 124445666654
No 433
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.80 E-value=2.1e-09 Score=75.70 Aligned_cols=76 Identities=13% Similarity=0.047 Sum_probs=53.8
Q ss_pred EecCCCEEEEeEEeec---CCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESY---PKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~---p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.+. |.+ .+.|+++ +..+............++.+...+.|.|.+++.+|.|.|.|.+.|..+.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 107 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFID-DVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFP 107 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEES-SCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEEC-CccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCC
Confidence 5689999999999987 777 8999999 4443221100000111123445568999999999999999999998875
Q ss_pred e
Q psy16261 87 S 87 (158)
Q Consensus 87 ~ 87 (158)
.
T Consensus 108 ~ 108 (239)
T 1i1c_A 108 A 108 (239)
T ss_dssp S
T ss_pred C
Confidence 4
No 434
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.80 E-value=1.1e-07 Score=59.61 Aligned_cols=93 Identities=12% Similarity=0.197 Sum_probs=60.9
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCC-Ce---eee----------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-KPITFWTHEN-GS---LIH----------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~-~~---~~~----------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
++..+..+.+.+|+.+.|.|.+.... ...+.|++.. +. .+. ...|+.+..... ....+|.|.
T Consensus 2 ~~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~---~~~~~L~I~ 78 (117)
T 3bp6_A 2 LTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPN---RHDFHMNIL 78 (117)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTT---SSEEEEEES
T ss_pred ceecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCC---CCEEEEEEC
Confidence 34556777899999999999998754 4689998751 11 111 124555543111 113479999
Q ss_pred CCCCCCCeEEEEEEEcCCCce----EEEEEEEEec
Q psy16261 67 SLSKSDFGTYKCNAKNTLGGS----EGVIKVYNIG 97 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~ 97 (158)
+++.+|+|.|.|.+.+..+.. ...+.|.|.+
T Consensus 79 ~~~~~Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~ 113 (117)
T 3bp6_A 79 DTRRNDSGIYLCGAISLHPKLKIEESPGAELVVTE 113 (117)
T ss_dssp SCCGGGCEEEEEEEEECSSSCEEEECCCEEEEEC-
T ss_pred cCCHHHCEEEEEEEEecCCccccccCCcEEEEEEh
Confidence 999999999999998764431 2345666654
No 435
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.79 E-value=1.9e-09 Score=74.36 Aligned_cols=90 Identities=18% Similarity=0.200 Sum_probs=57.2
Q ss_pred CceEEEecCCCEEEEeEEee-cCCCe----eEEEcCCCeeee-------------cCCeEEEEEeecccceEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHVES-YPKPI----TFWTHENGSLIH-------------EGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g-~p~p~----i~W~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
+..+.+.+|+.+.|.|.+.+ .+.+. +.|+++ +.... ...|+.+...........++|.|.+
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH-GESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBS-SSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeC-CCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 44566889999999999954 44444 899998 43110 0234433321000000123799999
Q ss_pred CCCCCCeEEEEEEEcCC-CceEEEEEEEEe
Q psy16261 68 LSKSDFGTYKCNAKNTL-GGSEGVIKVYNI 96 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~ 96 (158)
++.+|+|.|.|.+.|.. +.....+.|.|.
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~ 114 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVL 114 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCC
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEE
Confidence 99999999999999876 555555544443
No 436
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.79 E-value=4.9e-08 Score=68.42 Aligned_cols=72 Identities=18% Similarity=0.192 Sum_probs=50.9
Q ss_pred EEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee----------------cCCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 9 IGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH----------------EGSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
..+.+|+.+.|.|.+.+.| .+.+.|++++ +..+. ...|+.+...... ...+|.|.+++
T Consensus 132 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~ 208 (242)
T 2znx_A 132 SLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSK---NQYYLDLNSVT 208 (242)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTT---TEEEEEECSCC
T ss_pred ceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCC---CEEEEEECCCC
Confidence 3478899999999999876 4789999852 22211 1345554432100 12479999999
Q ss_pred CCCCeEEEEEEEcC
Q psy16261 70 KSDFGTYKCNAKNT 83 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~ 83 (158)
.+|+|.|.|.|.|.
T Consensus 209 ~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 209 TEDTATYYCANXDG 222 (242)
T ss_dssp GGGCEEEEEEETTS
T ss_pred cCcCEEEEEeccCC
Confidence 99999999999984
No 437
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.79 E-value=3.8e-08 Score=69.31 Aligned_cols=73 Identities=16% Similarity=0.279 Sum_probs=52.2
Q ss_pred EEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceee------e-----------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 9 IGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLI------H-----------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~------~-----------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
..+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+ . ...|+.+...... ....|.|.++
T Consensus 144 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v 220 (256)
T 3ux9_B 144 GLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSK---NTLYLQMNSL 220 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTT---TEEEEEECSC
T ss_pred eEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCC---CEEEEEECCC
Confidence 3478899999999999877 7899999862 1111 0 1135555543211 1246999999
Q ss_pred CCCCCeEEEEEEEcCC
Q psy16261 69 SKSDFGTYKCNAKNTL 84 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~ 84 (158)
+.+|+|.|.|.+.|..
T Consensus 221 ~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 221 RAEDTAVYYCARYIDF 236 (256)
T ss_dssp CGGGCEEEEEEEEETT
T ss_pred ChhhCEEEEEEEEcCC
Confidence 9999999999999963
No 438
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.79 E-value=1.3e-07 Score=65.20 Aligned_cols=89 Identities=17% Similarity=0.170 Sum_probs=58.4
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-------------------cCCeEEEEEeecccceEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-------------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. +..+. ...|+.+..... ....+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~s 82 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDS---KNTAF 82 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGG---GTEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCC---CCEEE
Confidence 34556789999999999998744 5789998741 11110 124565554321 11347
Q ss_pred EEEcCCCCCCCeEEEEEEEcCC--CceEEEEEEEEe
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNTL--GGSEGVIKVYNI 96 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~~--g~~~~~~~l~v~ 96 (158)
|.|.+++.+|+|.|.|.+.+.. ......+.|.|.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 83 LQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVS 118 (221)
T ss_dssp EEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEEC
T ss_pred EEECCCCHHHCEEEEEEEECCChhheECCCEEEEEe
Confidence 9999999999999999999863 122233455554
No 439
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.78 E-value=3.5e-09 Score=74.06 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=54.6
Q ss_pred EEecCCCEEEEeEEeec-CC-C-eeEEEcCCCeee-ecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 10 GARLAAPLTLDCHVESY-PK-P-ITFWTHENGSLI-HEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 10 ~~~~g~~v~l~C~~~g~-p~-p-~i~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+.+|+.+.|.|.+.|. |. | .++|+++ +..+ ...... .....++.|...+.|.|.++..+|.|.|+|.+.|..+
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~-g~~~~~~~~~~-~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~ 101 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDSSLSVTWTRE-KSGNLRPDPMV-LQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEEL 101 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCTTCEEEEECS-SSSCCCCCCCE-EEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTC
T ss_pred hcccCCceEEEEEEeCccCCCCeEEEEEcC-Ceecccccccc-ceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCC
Confidence 35689999999999995 64 5 9999998 6655 322221 1112223444556899999999999999999999876
Q ss_pred ce
Q psy16261 86 GS 87 (158)
Q Consensus 86 ~~ 87 (158)
..
T Consensus 102 ~~ 103 (231)
T 2w59_A 102 PL 103 (231)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 440
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.78 E-value=1.3e-08 Score=70.40 Aligned_cols=75 Identities=15% Similarity=0.280 Sum_probs=53.8
Q ss_pred ecCCCEEEEeEEeec-CC--CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 12 RLAAPLTLDCHVESY-PK--PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~-p~--p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
..|+.+.|.|.+.+. |. +.+.|+++ +..+... ........++.|...+.|.|......|.|.|+|.|.|..+...
T Consensus 135 ~~g~~v~L~C~~~g~~P~~~~~v~W~~~-~~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 135 LSSDPVIIGCLIHDYFPSGTMNVTWGKS-GKDITTV-NFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCCSSEEEEEEEEEEBSCCCEEEEESCC-CSSCEEE-ECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cCCCcEEEEEEEEeEECCCcEEEEEecC-CEecceE-ecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 468999999999987 76 69999999 5543110 0000112224455566799999998999999999999988754
No 441
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.78 E-value=5.8e-08 Score=68.03 Aligned_cols=72 Identities=17% Similarity=0.289 Sum_probs=51.0
Q ss_pred EEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 9 IGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
..+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+. ...|+.+..... .....|.|.++
T Consensus 137 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v 213 (247)
T 1svz_A 137 ELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTS---TSTAFLQINNL 213 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGG---GTEEEEEECSC
T ss_pred eeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecC---CCEEEEEECCC
Confidence 3488999999999999875 5699999862 11110 124555443210 01247999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16261 69 SKSDFGTYKCNAKNT 83 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~ 83 (158)
+.+|+|.|.|.+.|.
T Consensus 214 ~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 214 KNEDTATYFCVRDRH 228 (247)
T ss_dssp CGGGCEEEEEEEEEG
T ss_pred ChhHCEEEEEEEecc
Confidence 999999999999985
No 442
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.78 E-value=8.4e-08 Score=59.89 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=52.7
Q ss_pred CceEEEecCCCEEEEeEEeec-CCCeeEEEcCC-C---eee-e--c----------CCeEEEEEeecccceEEEEEEEcC
Q psy16261 6 SQLIGARLAAPLTLDCHVESY-PKPITFWTHEN-G---SLI-H--E----------GSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~-~---~~~-~--~----------~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
+..+.+.+|+++.|.|...+. +.+.+.|++.. + ..+ . . ..|+...... ...+|.|.+
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~-----~~~~L~I~~ 82 (115)
T 2otu_A 8 SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSG-----ADRYLSISN 82 (115)
T ss_dssp CCCEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEET-----TEEEEEESS
T ss_pred CCCEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccC-----CEEEEEECC
Confidence 667778999999999999875 56789998741 1 111 1 0 1345444321 124799999
Q ss_pred CCCCCCeEEEEEEEcCC
Q psy16261 68 LSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~ 84 (158)
++.+|+|.|.|.+.+..
T Consensus 83 ~~~~Dsg~Y~C~~~~~~ 99 (115)
T 2otu_A 83 IQPEDEAIYICGVGDTI 99 (115)
T ss_dssp CCGGGCEEEEEEEEECC
T ss_pred CChhHCEEEEEEEecCC
Confidence 99999999999998754
No 443
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.77 E-value=4.2e-08 Score=68.33 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=51.5
Q ss_pred CceEEEecCCCEEEEeEEeecCC--CeeEEEcCC--Cee--e---e-----------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYPK--PITFWTHEN--GSL--I---H-----------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~--~~~--~---~-----------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+....+.+|+.+.|.|.+.+.|. +.+.|++++ ... + . ...++.+..... .....|.|
T Consensus 126 ~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I 202 (240)
T 1moe_A 126 SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTS---SNTAYLQL 202 (240)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETT---TTEEEEEE
T ss_pred CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEccc---CCEEEEEE
Confidence 34456788999999999999874 589999852 111 0 0 123444443210 01247999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.|.+.
T Consensus 203 ~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 203 TSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CSCCGGGCEEEEEEECST
T ss_pred CcCCHHHCEEEEEEEEec
Confidence 999999999999999853
No 444
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.77 E-value=2.4e-08 Score=71.66 Aligned_cols=86 Identities=20% Similarity=0.218 Sum_probs=57.0
Q ss_pred EEEecCCCEEEEeEEee-cC-CCeeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcCCCCCCC
Q psy16261 9 IGARLAAPLTLDCHVES-YP-KPITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSKSDF 73 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g-~p-~p~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~ 73 (158)
+.+.+|+++.|.|.+.+ .+ .+.+.|++.. +..+. ...|+...... ....|.|.+++.+|+
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~Ds 223 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSG-----NTASLTITGLQPEDE 223 (280)
T ss_dssp EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEET-----TEEEEEECSCCGGGC
T ss_pred EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccC-----CEEEEEECCCCHHHC
Confidence 67889999999999988 44 4789998731 22211 12455554332 123699999999999
Q ss_pred eEEEEEEEcCCCc---eEEEEEEEEeccC
Q psy16261 74 GTYKCNAKNTLGG---SEGVIKVYNIGYF 99 (158)
Q Consensus 74 G~Y~C~a~n~~g~---~~~~~~l~v~~~~ 99 (158)
|.|.|.+.|..+. ....+.|.|...+
T Consensus 224 G~Y~C~~~~~~~~~~~~g~~t~l~V~~~~ 252 (280)
T 3fku_X 224 ADYYCSTWDSSLSAVVFGGGTKLTVLGQP 252 (280)
T ss_dssp SEEEEEEEETTTTEEEEBCCCEEEEC---
T ss_pred EEEEEEEecCCCCceEECCCEEEEECCCC
Confidence 9999999997632 1223566665543
No 445
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.77 E-value=6.8e-08 Score=68.75 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=54.9
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceeee-----------------cCCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLIH-----------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +..+. ...|+.+..... ....+|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~ 82 (257)
T 3bn9_D 6 QSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNS---KNTLYLQ 82 (257)
T ss_dssp EECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETT---TTEEEEE
T ss_pred ccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCC---CCEEEEE
Confidence 34456789999999999999876 5789998852 21110 124555543210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcCCC
Q psy16261 65 IGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~~g 85 (158)
|.+++.+|+|.|.|.+.|..|
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~g 103 (257)
T 3bn9_D 83 MSSLRAEDTAVYYCARPYLTY 103 (257)
T ss_dssp EESCCGGGCEEEEEEEECCSS
T ss_pred ECCCChhhCEEEEEEEecCCC
Confidence 999999999999999999765
No 446
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.77 E-value=6.3e-08 Score=73.51 Aligned_cols=91 Identities=14% Similarity=0.181 Sum_probs=61.3
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ceee----e-------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GSLI----H-------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~~~----~-------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..+..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ +..+ . ...|+.+..... ...++|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L 81 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNA---KNTLYL 81 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETT---TTEEEE
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCC---CCeEEE
Confidence 345566799999999999998875 5789998752 2211 0 124565543210 012479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCCce---EEEEEEEEec
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLGGS---EGVIKVYNIG 97 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~ 97 (158)
.|.+++.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (444)
T 1igt_B 82 QMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS 118 (444)
T ss_dssp EECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECS
T ss_pred EECCCCHHHCEEEEEEEecCCcccccccCcEEEEecC
Confidence 999999999999999999976542 2235566653
No 447
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.77 E-value=2.1e-08 Score=69.77 Aligned_cols=78 Identities=17% Similarity=0.271 Sum_probs=53.3
Q ss_pred EecCCCEEEEeEEeec-CCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 11 ARLAAPLTLDCHVESY-PKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+.+|+.+.|.|.+.|. |.| .+.|+++ +..+.......+. .. +.+...+.|.|..+..+| |.|+|.|.|..+...
T Consensus 142 ~~~g~~~~l~C~~~g~~P~p~~v~W~~~-~~~~~~~~~~~~~-~~-~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~ 217 (228)
T 3bae_H 142 DTTGSSVTLGCLVKGYFPEPVTLTWNSG-SLSSGVHTFPAVL-QS-DLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTK 217 (228)
T ss_dssp --CCSEEEEEEEEEEEBSSCCEEEEGGG-TCCTTEEEEEEEE-ET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred ccCCCCEEEEEEEccEeCCCEEEEEeeC-CcccCceEcCcee-CC-CcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCC
Confidence 4579999999999986 777 9999998 5532111111111 11 344556789999988866 999999999988765
Q ss_pred EEEE
Q psy16261 89 GVIK 92 (158)
Q Consensus 89 ~~~~ 92 (158)
....
T Consensus 218 ~~~~ 221 (228)
T 3bae_H 218 VDKK 221 (228)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 448
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.77 E-value=2.3e-07 Score=59.64 Aligned_cols=94 Identities=12% Similarity=0.193 Sum_probs=62.2
Q ss_pred eecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCC-Ce---eee----------cCCeEEEEEeecccceEEEEEEEcC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYP-KPITFWTHEN-GS---LIH----------EGSRYHMWTEKFSSYKFYMRLYIGS 67 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~-~~---~~~----------~~~~~~~~~~~~~~~~~~~~l~i~~ 67 (158)
+..+..+.+.+|+.+.|.|...... ...+.|++.. +. .+. ...|+....... .....|.|.+
T Consensus 13 ~Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~---~~~~~L~I~~ 89 (134)
T 3bik_B 13 TFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPN---RHDFHMNILD 89 (134)
T ss_dssp EEECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTT---SSEEEEEECS
T ss_pred EECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCC---CCEEEEEECC
Confidence 3456677899999999999997654 4689999752 11 111 124555542110 1134799999
Q ss_pred CCCCCCeEEEEEEEcCCCce----EEEEEEEEeccC
Q psy16261 68 LSKSDFGTYKCNAKNTLGGS----EGVIKVYNIGYF 99 (158)
Q Consensus 68 v~~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~~~ 99 (158)
++.+|+|.|.|.+.+..... ...+.|.|....
T Consensus 90 ~~~~Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 90 TRRNDSGIYLCGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp CCGGGCEEEEEEEEECSSSCEEEECCCEEEEEECCC
T ss_pred CChHHCEEEEEEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 99999999999998764321 224677776654
No 449
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.77 E-value=8e-09 Score=75.36 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=53.5
Q ss_pred CCEEEEeEEeec-C-CCeeEEEcCCCeeeecCCeE-EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEE
Q psy16261 15 APLTLDCHVESY-P-KPITFWTHENGSLIHEGSRY-HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVI 91 (158)
Q Consensus 15 ~~v~l~C~~~g~-p-~p~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 91 (158)
+.+.|.|.+.|. | .+.+.|+++ +..+...... ..... ++.+...+.|.|......|.|.|+|.|.|..+.....+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~-g~~l~~~~~~~~~~~~-~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLED-GQVMDVDLSTASTTQE-GELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEET-TEECCGGGEEEEEEEE-TTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEEC-CEEcccceecCCcCcc-CCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceee
Confidence 589999999996 3 468999999 7776544322 11222 23444556788888888899999999999876554443
No 450
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.77 E-value=8.2e-09 Score=78.41 Aligned_cols=75 Identities=13% Similarity=0.116 Sum_probs=54.8
Q ss_pred ecCCCEEEEeEEeecC----CCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 12 RLAAPLTLDCHVESYP----KPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~p----~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.+|+.+.|.|.+.|.+ .+.+.|+++ +..+............++.+...+.|.|.++..+|.|.|+|.|.|..|..
T Consensus 253 ~~G~~~~L~C~~~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 253 MISLSPIVTCVVVDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp CTTSCCEEEEEEEEECTTCCCCEEEEEET-TEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred ecCCCcEEEEEEeecccCCCCeEEEEEEC-CccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 6799999999999984 358999999 66654332111111111223445689999999999999999999998876
No 451
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.76 E-value=3.1e-09 Score=73.82 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=54.9
Q ss_pred cCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeE-EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE
Q psy16261 13 LAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRY-HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 89 (158)
.|+.+.|.|.+.|.+++ .+.|+++ +..+...... ......++.+...+.|.|..+..+|.|.|+|.|.|..+....
T Consensus 149 ~g~~v~L~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 149 QANKATLVCLISDFFPGAVTVAWKAD-GAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp TTSCCCEEECCCBCSSCCCEEEEEET-TEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred cCCceEEEEEEEEEcCCceEEEEEEC-CEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 58899999999986443 8999999 7776543211 011112233444567999999999999999999998776544
Q ss_pred EE
Q psy16261 90 VI 91 (158)
Q Consensus 90 ~~ 91 (158)
.+
T Consensus 228 ~~ 229 (234)
T 2j6e_L 228 TV 229 (234)
T ss_dssp EE
T ss_pred ec
Confidence 33
No 452
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.76 E-value=1.6e-07 Score=64.53 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=56.0
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee-------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH-------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~-------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
+...+..+.+.+|+.+.|.|.+.+.+ +.+.|++.. +. .+. ...|+.+.... ......+|.|.+++.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~~L~I~~v~~ 80 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDS--KERRYSTLHIRDAQL 80 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECT--TTCSEEEEEECSCCG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEecc--CCCCEEEEEECCCCH
Confidence 34567778899999999999998754 589998852 11 111 23455554330 001234799999999
Q ss_pred CCCeEEEEEEEcCC
Q psy16261 71 SDFGTYKCNAKNTL 84 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~ 84 (158)
+|+|.|.|.+.+..
T Consensus 81 ~D~G~Y~C~~~~~~ 94 (207)
T 1ypz_E 81 EDSGTYFCAADTWH 94 (207)
T ss_dssp GGCEEEEEEEECBC
T ss_pred HHCEEEEEEEecCC
Confidence 99999999999864
No 453
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.76 E-value=4.3e-09 Score=76.83 Aligned_cols=76 Identities=16% Similarity=0.274 Sum_probs=52.9
Q ss_pred EecCCCEEEEeEEeec-CCC---eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 11 ARLAAPLTLDCHVESY-PKP---ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~-p~p---~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
+.+|+.+.|.|.+.|. |.| .+.|+++++..+........ ....+.+...+.|.|.+++.+|.|.|+|.|.|..+.
T Consensus 125 v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~-~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 203 (323)
T 2wqr_A 125 LFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEE-KQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLP 203 (323)
T ss_dssp HHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEE-ECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred hccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCc-cCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCC
Confidence 5579999999999986 456 89999974555433222211 111122334457999999999999999999998644
Q ss_pred e
Q psy16261 87 S 87 (158)
Q Consensus 87 ~ 87 (158)
.
T Consensus 204 ~ 204 (323)
T 2wqr_A 204 R 204 (323)
T ss_dssp S
T ss_pred C
Confidence 3
No 454
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.76 E-value=6.6e-08 Score=73.71 Aligned_cols=79 Identities=15% Similarity=0.284 Sum_probs=56.4
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee-e-------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI-H-------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~-~-------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
..+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +. .+ . ...|+.+...... ..+.|
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~---~~~~L 81 (457)
T 1hzh_H 5 VQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSA---NTAYM 81 (457)
T ss_dssp EECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTT---TEEEE
T ss_pred ecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCC---CEEEE
Confidence 345567799999999999999876 6789999741 21 11 0 1245555432100 12479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCC
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.|.+++.+|+|.|+|.+.|..|
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~ 103 (457)
T 1hzh_H 82 ELRSLRSADTAVYYCARVGPYS 103 (457)
T ss_dssp EECSCCGGGCEEEEEEECCCCC
T ss_pred EECCCCcccCEEEEEEEecCCc
Confidence 9999999999999999999865
No 455
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.75 E-value=6.1e-08 Score=60.32 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=52.8
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee-c------------CCeEEEEEeecccceEEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH-E------------GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~-~------------~~~~~~~~~~~~~~~~~~~l~i 65 (158)
...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. +. .+. . ..|+....... . +|.|
T Consensus 5 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~-----~-~L~I 78 (112)
T 1fo0_B 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD-----T-ELRL 78 (112)
T ss_dssp EEECSEEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEET-----T-EEEE
T ss_pred EeCCCeEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCC-----C-eEEE
Confidence 44566778899999999999977677899998752 11 111 1 02333332220 1 6999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 79 ~~~~~~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 79 QVANMSQGRTLYCTCSAD 96 (112)
T ss_dssp EEESCCSCEEEEEEEESS
T ss_pred cCCCHhHCEEEEEEEEcC
Confidence 999999999999999864
No 456
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.75 E-value=4e-08 Score=62.54 Aligned_cols=89 Identities=15% Similarity=0.252 Sum_probs=57.3
Q ss_pred CceEEEecCCCEEEEeEEeec---CCCeeEEEcCC-C---eee-e--c----------CCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESY---PKPITFWTHEN-G---SLI-H--E----------GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~---p~p~i~W~~~~-~---~~~-~--~----------~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+.+.|.|.+.+. ....+.|++.. + ..+ . . ..|+.+..... ....+|.|
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~---~~~~sL~I 83 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVA---RNRGYLSI 83 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGG---GTEEEEEE
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCC---CCeEEEEE
Confidence 456789999999999999764 24689998752 1 111 1 0 13554443211 11347999
Q ss_pred cCCCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy16261 66 GSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIG 97 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 97 (158)
.+++.+|+|.|.|.+.+..+.....+.|.|..
T Consensus 84 ~~~~~~DsG~Y~C~~~~~~~~~~~~t~l~v~~ 115 (126)
T 2h32_A 84 SELQPEDEAMYYCAMGARSSEKEEREREWEEE 115 (126)
T ss_dssp CSCCGGGCEEEEEEEECSCCCCCCTTCC----
T ss_pred CCCChhHCEEEEEEEEcCCCCcceeEEEeecc
Confidence 99999999999999998776554444444433
No 457
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.75 E-value=2.1e-08 Score=68.43 Aligned_cols=84 Identities=7% Similarity=-0.034 Sum_probs=54.8
Q ss_pred ecCCCEEEEeEE-eecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEE-
Q psy16261 12 RLAAPLTLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEG- 89 (158)
Q Consensus 12 ~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~- 89 (158)
..++.+.+.|.+ .+.|.+.+.|.++ +..+...... .....+.+...+.|.|..+..+|.|.|+|.|.|..+....
T Consensus 134 ~~~~~~~~~c~~~~~~P~~~~~w~~~-~~~~~~~~~~--~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~ 210 (225)
T 4fmk_A 134 GPQSVAVARCVSTGGRPPARITWISS-LGGEAKDTQE--PGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPIL 210 (225)
T ss_dssp SSSCEEEEEEEEEEEBSCCEEEEECS-SCCEEEEEEE--ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred cceeeeeeeeeecCCCCCCEEEEEEC-CccccCCcce--EEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEE
Confidence 345556666654 5678889999998 4433222111 1111133444567999999999999999999999887644
Q ss_pred -EEEEEEecc
Q psy16261 90 -VIKVYNIGY 98 (158)
Q Consensus 90 -~~~l~v~~~ 98 (158)
.++|.|.+.
T Consensus 211 ~~v~l~V~Y~ 220 (225)
T 4fmk_A 211 LPVTLSVRYH 220 (225)
T ss_dssp EEEECCBTTC
T ss_pred EEEEEEEEEC
Confidence 455555554
No 458
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.74 E-value=3.1e-09 Score=74.91 Aligned_cols=74 Identities=20% Similarity=0.322 Sum_probs=52.7
Q ss_pred cCCCEEEEeEEeec-CCC-eeEEEcCCCeeeecCCeE--EEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 13 LAAPLTLDCHVESY-PKP-ITFWTHENGSLIHEGSRY--HMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 13 ~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
+|+.+.|.|.+.|. |.+ .+.|+++ +..+...... ......++.|...+.|.|..+..+|.|.|+|.|.|.....
T Consensus 164 ~g~~v~L~C~~~g~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 164 TSGGASVVCFLNNFYPKDINVKWKID-GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp HHTEEEEEEEEEEEBSSCCEEEEEET-TEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCcEEEEEEEeeEeCCCcEEEEEEC-CeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 47899999999995 444 7999999 7766443111 1111222345556789999999999999999999986553
No 459
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.74 E-value=5.2e-09 Score=71.81 Aligned_cols=73 Identities=15% Similarity=0.261 Sum_probs=51.2
Q ss_pred cCCCEEEEeEEeec-CCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 13 LAAPLTLDCHVESY-PKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 13 ~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
.|+.+.|.|.+.|. |.+ .+.|+++ +..+............++.|...+.|.+......|.|.|+|.|.|....
T Consensus 123 ~g~~~~L~C~~~g~~P~~~~v~W~k~-g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 123 AKDKVSLTCMITDFFPEDITVEWESN-GQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEET-TEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred cCCceEEEEEEeeEECCCCEEEEEEC-CEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 48899999999995 443 8999999 7765432211112233345666667888777667899999999998653
No 460
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.72 E-value=3.3e-07 Score=58.13 Aligned_cols=78 Identities=17% Similarity=0.231 Sum_probs=54.2
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
++.++..+.+.+|+++.|.|.........+.|++.. +. .+. ...|+.+.... ....+|.|
T Consensus 8 V~Q~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~----~~~~sL~I 83 (125)
T 3r8b_B 8 VTQSPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPS----QENFSLIL 83 (125)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEE----TTEEEEEE
T ss_pred EEecCCeEEEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecC----CCEEEEEE
Confidence 345667778999999999999987665689998741 21 111 01344443221 11357999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~~~~~Dsg~Y~C~~~~~ 101 (125)
T 3r8b_B 84 ELATPSQTSVYFCASGGG 101 (125)
T ss_dssp TTCCGGGCEEEEEEEEET
T ss_pred CCCChhhCEEEEEEEcCC
Confidence 999999999999998764
No 461
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.72 E-value=9.4e-08 Score=59.58 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=53.7
Q ss_pred eecCceEEEecCCCEEEEeEEeec-CCCeeEEEcCCC----e---eee--------------cCCeEEEEEeecccceEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESY-PKPITFWTHENG----S---LIH--------------EGSRYHMWTEKFSSYKFY 60 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~~----~---~~~--------------~~~~~~~~~~~~~~~~~~ 60 (158)
+..+..+.+.+|+.+.|.|.+.+. +...+.|++... . .+. ...|+.+...... ..
T Consensus 2 ~Q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~---~~ 78 (115)
T 2atp_B 2 IQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDS---RR 78 (115)
T ss_dssp EEECSEEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTS---SS
T ss_pred ccCCCCEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCC---CE
Confidence 345667789999999999999875 466899987621 1 110 0245555441110 11
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 61 MRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 61 ~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+|.|.+++.+|+|.|.|.+.+.
T Consensus 79 ~~L~I~~~~~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 79 PFLSIMNVKPEDSDFYFCATVGS 101 (115)
T ss_dssp CEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEECCCCHHHCEEEEEeEccC
Confidence 37999999999999999998763
No 462
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.71 E-value=8.9e-09 Score=70.60 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=46.9
Q ss_pred ecCCCEEEEeEEeecCC----CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 12 RLAAPLTLDCHVESYPK----PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~p~----p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.+|+.+.|.|.+.|.++ ..+.|+++ +..+.............+.+...+.|.|......|.|.|+|.|.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVD-GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEET-TEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEEC-CccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 68999999999999763 39999999 76554321100011111223333345443333344999999999998765
No 463
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.71 E-value=4.3e-09 Score=72.84 Aligned_cols=73 Identities=18% Similarity=0.238 Sum_probs=50.9
Q ss_pred cCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 13 LAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 13 ~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
.|+.+.|.|.+.| .|.+ .+.|+++ +..+............++.|...+.|.+......|.|.|+|.|.|....
T Consensus 131 ~g~~~~L~C~~~g~~P~~~~v~W~k~-g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 131 SRKDVSLTCLVVGFNPGDISVEWTSN-GHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp TSSEEEEEEEEEEEBSSCCEEEEEET-TEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cCCceEEEEEEEeeeCCCcEEEEEEC-CEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 4889999999999 5766 8999999 7665332222222233344555666777666556789999999998654
No 464
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.71 E-value=1.7e-07 Score=59.41 Aligned_cols=74 Identities=18% Similarity=0.242 Sum_probs=53.1
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-C---eeee---------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-G---SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
+..+.+.+|+++.|.|...+.+ ...+.|++.. + +.+. ...|+...... ...+|.|.+++.
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~-----~~~sL~I~~l~~ 81 (123)
T 3t0v_A 7 SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSG-----TSASLAISGLRS 81 (123)
T ss_dssp CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEECSCCG
T ss_pred cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccC-----CEEEEEECCCCH
Confidence 4577899999999999998764 3689998741 1 1121 12456554321 134799999999
Q ss_pred CCCeEEEEEEEcCC
Q psy16261 71 SDFGTYKCNAKNTL 84 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~ 84 (158)
+|+|.|.|.+.+..
T Consensus 82 ~DsG~Y~C~~~~~~ 95 (123)
T 3t0v_A 82 EDEADYYCLSWDDS 95 (123)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEEcCC
Confidence 99999999998764
No 465
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.71 E-value=4.9e-08 Score=74.89 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=53.7
Q ss_pred EecCCCEEEEeEEeecCC---CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 11 ARLAAPLTLDCHVESYPK---PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~---p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
+.+|+.+.|.|.+.|.++ +.+.| .+ +...... .........+.+...+.|.|.++..+|.|.|+|.|.|..|..
T Consensus 259 ~~~G~~v~L~C~~~g~~p~~~~~i~W-~~-~~~~~~~-~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 259 LLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAV-QGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKT 335 (475)
T ss_pred hccCCceEEEEEEEcccCCCceEEEE-CC-CCcCCcc-ccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCC
Confidence 478999999999998754 58999 44 3322111 111111111223345679999999999999999999998876
Q ss_pred EEEEEE
Q psy16261 88 EGVIKV 93 (158)
Q Consensus 88 ~~~~~l 93 (158)
.....|
T Consensus 336 ~~~~~v 341 (475)
T 1iga_A 336 PLTATL 341 (475)
T ss_pred ceEEEe
Confidence 544444
No 466
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.71 E-value=2.5e-09 Score=74.30 Aligned_cols=72 Identities=17% Similarity=0.291 Sum_probs=47.0
Q ss_pred cCCCEEEEeEEeecCCC--eeEEEcCCCeeeecC-Ce-EEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 13 LAAPLTLDCHVESYPKP--ITFWTHENGSLIHEG-SR-YHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
+|+.+.|.|.+.|.+++ .+.|+++ +..+... .. .......++.+...+.|.|.....+|.|.|+|.|.|...
T Consensus 148 ~g~~v~L~C~~~g~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 148 TSGGASVVCFLNNFYPKDINVKWKID-GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp HTTEEEEEEEEEEEBSSCEEEEEEEC------CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred cCCceEEEEEEccccCCceEEEEEEC-CeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 48899999999996443 7999999 7665443 11 111111223445566899999999999999999999754
No 467
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.70 E-value=4.7e-08 Score=61.53 Aligned_cols=79 Identities=14% Similarity=0.145 Sum_probs=53.4
Q ss_pred cCceEEEecCCCEEEEeEEeecC----CCeeEEEcCC---Ceeee-----cCCeEEEEEeecccceEEEEEEEcCCCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP----KPITFWTHEN---GSLIH-----EGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p----~p~i~W~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d 72 (158)
.|..+.+.+|+++.|.|.+...+ .+.+.|++.. +..+. ...|+..............+|.|.+++.+|
T Consensus 13 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~D 92 (120)
T 3noi_A 13 QPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHD 92 (120)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGG
T ss_pred CCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhh
Confidence 45677899999999999998765 4579999873 23332 124554322110000112369999999999
Q ss_pred CeEEEEEEEcC
Q psy16261 73 FGTYKCNAKNT 83 (158)
Q Consensus 73 ~G~Y~C~a~n~ 83 (158)
+|.|.|.+...
T Consensus 93 sG~Y~C~v~~~ 103 (120)
T 3noi_A 93 ASIYVCRVEVL 103 (120)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEEC
Confidence 99999999853
No 468
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.69 E-value=9.6e-08 Score=67.93 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=51.7
Q ss_pred ceEEEecCCCEEEEeEEeecCC--CeeEEEcCC-Cee---ee----------------cCCeEEEEEeecccceEEEEEE
Q psy16261 7 QLIGARLAAPLTLDCHVESYPK--PITFWTHEN-GSL---IH----------------EGSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~-~~~---~~----------------~~~~~~~~~~~~~~~~~~~~l~ 64 (158)
....+.+|+.+.|.|.+.+.+. +.+.|+++. +.. +. ...++.+..... .....|.
T Consensus 159 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~ 235 (268)
T 1x9q_A 159 GGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDS---KSSVYLQ 235 (268)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGG---GTEEEEE
T ss_pred CceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCC---CCEEEEE
Confidence 3456889999999999998764 789998851 111 10 124555443210 0124799
Q ss_pred EcCCCCCCCeEEEEEEEcC
Q psy16261 65 IGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.+++.+|+|.|.|.+.|.
T Consensus 236 I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 236 MNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp ECSCCGGGCEEEEEEEEET
T ss_pred ECCCCHHHCEEEEEEEccC
Confidence 9999999999999999885
No 469
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.69 E-value=8.4e-08 Score=61.87 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=52.3
Q ss_pred ceEEEecCCCEEEEeEEeecC---CCeeEEEcCCC----eeee---------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYP---KPITFWTHENG----SLIH---------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p---~p~i~W~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
..+.+.+|+++.|.|.+...+ .+.+.|++... +.+. ...|+...... . ..+|.|.+++.
T Consensus 13 ~~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~-~----~~sL~I~~v~~ 87 (135)
T 1p4b_L 13 SALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG-D----KAALTITGAQT 87 (135)
T ss_dssp SEEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEET-T----EEEEEEESCCG
T ss_pred CcEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCC-C----EEEEEECCCCh
Confidence 348899999999999998765 56899987521 1111 12456554322 1 24799999999
Q ss_pred CCCeEEEEEEEcCC
Q psy16261 71 SDFGTYKCNAKNTL 84 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~ 84 (158)
+|+|.|.|.+.+..
T Consensus 88 ~DsG~Y~C~~~~~~ 101 (135)
T 1p4b_L 88 EDEAIYFCALWYSN 101 (135)
T ss_dssp GGCEEEEEEEECSS
T ss_pred hHCEEEEEEEecCC
Confidence 99999999998753
No 470
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.69 E-value=1.7e-07 Score=65.37 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=52.0
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee-e------------cCCeEEEEEeecccceEEEEEEEc
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI-H------------EGSRYHMWTEKFSSYKFYMRLYIG 66 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~-~------------~~~~~~~~~~~~~~~~~~~~l~i~ 66 (158)
+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +. .+ . ...|+.+...... ...+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~---~~~~L~I~ 83 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSK---NQFSLKLS 83 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTT---TEEEEEEC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCC---CEEEEEEC
Confidence 4456789999999999998865 5789998752 11 11 0 1245555432100 12379999
Q ss_pred CCCCCCCeEEEEEEEc
Q psy16261 67 SLSKSDFGTYKCNAKN 82 (158)
Q Consensus 67 ~v~~~d~G~Y~C~a~n 82 (158)
+++.+|+|.|.|.+.+
T Consensus 84 ~v~~~D~G~Y~C~~~~ 99 (232)
T 1dn0_B 84 SVTAADTAVYYCARPP 99 (232)
T ss_dssp SCCGGGCEEEEEEECS
T ss_pred CCCcccCEEEEEEEec
Confidence 9999999999999983
No 471
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.69 E-value=1.2e-07 Score=67.38 Aligned_cols=72 Identities=17% Similarity=0.297 Sum_probs=50.8
Q ss_pred EEEecCCCEEEEeEEeecCC--CeeEEEcCC-Ce---eee---c-----------CCeEEEEEeecccceEEEEEEEcCC
Q psy16261 9 IGARLAAPLTLDCHVESYPK--PITFWTHEN-GS---LIH---E-----------GSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~--p~i~W~~~~-~~---~~~---~-----------~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
..+.+|+.+.|.|.+.+.+. +.+.|+++. +. .+. . ..|+.+..... .....|.|.++
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v 224 (264)
T 2gjj_A 148 EVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTS---SSTAFMQLNSL 224 (264)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETT---TTEEEEEECSC
T ss_pred EEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCC---CCEEEEEECcC
Confidence 35788999999999998874 799999862 11 111 0 23444432110 01347999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy16261 69 SKSDFGTYKCNAKNT 83 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~ 83 (158)
+.+|+|.|.|.+.|.
T Consensus 225 ~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 225 TSEDSADYYCVRSGN 239 (264)
T ss_dssp CGGGCEEEEEEEECS
T ss_pred CcccCEEEEEEEecC
Confidence 999999999999995
No 472
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.68 E-value=1.9e-07 Score=65.83 Aligned_cols=77 Identities=21% Similarity=0.355 Sum_probs=54.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+...+..+.+.+|+++.|.|.+. .+.+.+.|++.. +. .+. ...|+.+.....+ ..+|.|
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~----~~~L~I 80 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKE----SFPLTV 80 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTT----BCCEEE
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCC----EEEEEE
Confidence 34567778899999999999985 467899999852 11 111 1234444321101 136999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.|.
T Consensus 81 ~~v~~~D~G~Y~C~~~~~ 98 (252)
T 1oga_E 81 TSAQKNPTAFYLCASSSR 98 (252)
T ss_dssp CSCCSCCCEEEEEEEESS
T ss_pred CcCChhhCEEEEEEEecC
Confidence 999999999999999986
No 473
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.68 E-value=1.3e-07 Score=63.94 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=48.1
Q ss_pred cCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEE
Q psy16261 13 LAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIK 92 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 92 (158)
.+..+.|.|.+.+.|.|.+.|+++ +..+ .. ... .+.+. ....|.|.|+|.|.|.++.......
T Consensus 114 ~~~~v~L~C~~~~~p~~~~~W~~~-g~~l-~~------~~~--------~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~~ 176 (182)
T 1hnf_A 114 TCINTTLTCEVMNGTDPELNLYQD-GKHL-KL------SQR--------VITHK-WTTSLSAKFKCTAGNKVSKESSVEP 176 (182)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEES-SCEE-EE------ESS--------CEEEE-CCSCEEEEEEEEEECSSCEEEEEEE
T ss_pred ccCcEEEEeEccCCCCCEEEEEEC-CEEC-CC------CCc--------EEEEe-cccCCCcEEEEEEEeCCCCcEEcce
Confidence 345789999999999999999999 6665 11 111 23332 2578999999999999998877665
Q ss_pred EE
Q psy16261 93 VY 94 (158)
Q Consensus 93 l~ 94 (158)
+.
T Consensus 177 ~~ 178 (182)
T 1hnf_A 177 VS 178 (182)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 474
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.68 E-value=3.8e-07 Score=56.76 Aligned_cols=79 Identities=13% Similarity=0.267 Sum_probs=53.7
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee-ec-----------CCeEEEEEeecccceEEEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI-HE-----------GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~-~~-----------~~~~~~~~~~~~~~~~~~~l~i 65 (158)
..+..+.+.+|+.+.|.|.+.+.+ ...+.|++.. +. .+ .. ..|+.+..... ....+|.|
T Consensus 4 q~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I 80 (114)
T 1u9k_A 4 LEEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPS---EAMLQVQM 80 (114)
T ss_dssp -CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGG---GTEEEEEE
T ss_pred cCCccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCc---CCEEEEEE
Confidence 356677899999999999997643 4589999852 11 11 11 13444432211 11347999
Q ss_pred cCCCCCCCeEEEEEEEcCCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~g 85 (158)
.+++.+|+|.|.|.+.+..+
T Consensus 81 ~~~~~~Dsg~Y~C~~~~~~~ 100 (114)
T 1u9k_A 81 TDLQVTDSGLYRCVIYHPPN 100 (114)
T ss_dssp CSCCGGGCEEEEEEEECTTS
T ss_pred CCCChHHCEEEEEEEecCCC
Confidence 99999999999999998754
No 475
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.66 E-value=9.9e-09 Score=71.25 Aligned_cols=74 Identities=19% Similarity=0.322 Sum_probs=51.3
Q ss_pred ecCCCEEEEeEEeec-CCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 12 RLAAPLTLDCHVESY-PKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
.+|+.+.|.|.+.|. |.| .+.|+++ +..+... ........++.|...+.|.|..+...| |.|+|.|.|..+...
T Consensus 141 ~~g~~v~L~C~~~g~~P~p~~v~W~~~-~~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 141 TSGGTAALGCLVKDYFPEPVTVSWNSG-ALTSGVH-TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp CCCCEEEEEEEEEEEBSSCCEEECCTT-SCCTTCE-ECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred cCCCcEEEEEEEEeEECCCeEEEEecC-CCcCCeE-ecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 468999999999987 776 9999998 5442110 000011222345556689999998888 999999999765443
No 476
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.64 E-value=9.9e-08 Score=68.47 Aligned_cols=75 Identities=13% Similarity=0.191 Sum_probs=53.0
Q ss_pred CceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ceee----e-------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GSLI----H-------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~~~----~-------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+++.|.|.+.+. +.+.+.|++.. +..+ . ...|+.+..... ....+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~I 83 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQS---TRTAYMDL 83 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETT---TTEEEEEE
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCC---CCEEEEEE
Confidence 666779999999999999885 56789998741 1110 0 013454443211 11247999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.|.
T Consensus 84 ~~v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 84 RSLRSEDTAVYYCARSPS 101 (280)
T ss_dssp CSCCSTTCEECCEEECSS
T ss_pred CCCChhhCEEEEEEEecC
Confidence 999999999999999986
No 477
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.64 E-value=9.6e-08 Score=59.64 Aligned_cols=77 Identities=16% Similarity=0.229 Sum_probs=53.1
Q ss_pred eeecCceEEEecCCCEEEEeEEeecC-CCeeEEEcCC-Ce-----ee-ec------------CCeEEEEEeecccceEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYP-KPITFWTHEN-GS-----LI-HE------------GSRYHMWTEKFSSYKFYM 61 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p-~p~i~W~~~~-~~-----~~-~~------------~~~~~~~~~~~~~~~~~~ 61 (158)
++..|..+.+.+|+++.|.|.+.+.. ...+.|++.. +. .+ .. ..|+...... + ..
T Consensus 3 ~~q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~-~----~~ 77 (114)
T 2hp4_A 3 FRVSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLG-D----TF 77 (114)
T ss_dssp EEEECCSCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEET-T----EE
T ss_pred cEeCCCEEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecC-C----EE
Confidence 34556667788999999999997543 5689998631 22 11 10 2345443322 1 23
Q ss_pred EEEEcCCCCCCCeEEEEEEEcC
Q psy16261 62 RLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 62 ~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
+|.|.+++.+|+|.|.|.+.+.
T Consensus 78 ~L~I~~~~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 78 VLTLSDFRRENEGYYFCSALSN 99 (114)
T ss_dssp EEEESSCCGGGCEEEEEEEEET
T ss_pred EEEECCCCHHHCEEEEEEEecC
Confidence 7999999999999999999874
No 478
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.63 E-value=2.6e-08 Score=70.97 Aligned_cols=81 Identities=19% Similarity=0.178 Sum_probs=53.7
Q ss_pred EecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC-----
Q psy16261 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG----- 85 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g----- 85 (158)
+.+|+++.|.|.+.+. .+.+.|+|+ +..+....+......+ .....|.|.+++ |+|.|+|.+.|...
T Consensus 118 V~~G~~vtL~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~~----~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s 189 (257)
T 1b6u_A 118 VLAGESVTLSCSSRSS-YDMYHLSRE-GEAHERRFSAGPKVNG----TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWS 189 (257)
T ss_dssp CBTTCEEEEEEECSSC-CSEEEEEET-TSSCEECCBCBCCSSS----CCBEEEEEEECC--SCEEEEEEEECSSCTTBBC
T ss_pred cCCCCEEEEEEeCCCC-CcEEEEEEC-CcccCcccccccccCC----ceeEEEEecccc--cCEEEEEEEEcCCCCcccc
Confidence 6789999999999876 478999999 6554432211110000 012379999998 99999999997532
Q ss_pred ceEEEEEEEEeccC
Q psy16261 86 GSEGVIKVYNIGYF 99 (158)
Q Consensus 86 ~~~~~~~l~v~~~~ 99 (158)
..+..+.|.|.+.+
T Consensus 190 ~~S~pl~L~V~g~p 203 (257)
T 1b6u_A 190 NSSDPLLVSVTGNP 203 (257)
T ss_dssp CCCCCEEECCBCCC
T ss_pred cCCCCEEEEEeccC
Confidence 22445677777654
No 479
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.63 E-value=9.8e-08 Score=65.83 Aligned_cols=75 Identities=15% Similarity=0.224 Sum_probs=52.3
Q ss_pred ecCCCEEEEeEEee-cCC-C-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCce
Q psy16261 12 RLAAPLTLDCHVES-YPK-P-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGS 87 (158)
Q Consensus 12 ~~g~~v~l~C~~~g-~p~-p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 87 (158)
.+|+.+.|.|.+.+ .|. + .+.|+++ +..+............++.|...+.|.|......|.|.|+|.|.|..+..
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSES-GQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCC-STTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEEC-CEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 47899999999998 665 4 8999998 65542111000110122345555679999999999999999999987654
No 480
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.63 E-value=1.9e-07 Score=65.08 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=55.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeec--CCCeeEEEcCC-Ce---ee-e------------cCCeEEEEEeecccceEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESY--PKPITFWTHEN-GS---LI-H------------EGSRYHMWTEKFSSYKFYMR 62 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~--p~p~i~W~~~~-~~---~~-~------------~~~~~~~~~~~~~~~~~~~~ 62 (158)
+...+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. +. .+ . ...|+.+..... ....+
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~ 80 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPS---ASTSI 80 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCT---TTEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCC---CCEEE
Confidence 3455777889999999999999875 56789998752 11 11 0 134555443210 01247
Q ss_pred EEEcCCCCCCCeEEEEEEEcC
Q psy16261 63 LYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 63 l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.|.+++.+|+|.|.|.+.+.
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 81 LTIYSLEEEDEAIYYCSYGEG 101 (230)
T ss_dssp EEECSCCGGGCSEEEEEECCT
T ss_pred EEECcCChhhCEEEEEEEECC
Confidence 999999999999999999984
No 481
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.63 E-value=6e-08 Score=68.54 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=55.1
Q ss_pred EecCCCEEEEeEEee-cCCC-eeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceE
Q psy16261 11 ARLAAPLTLDCHVES-YPKP-ITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSE 88 (158)
Q Consensus 11 ~~~g~~v~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 88 (158)
+..|+.+.|.|.+.+ .|.+ .+.|+++ +...... ........ +.|...+.|.|......| |.|+|.+.|..+...
T Consensus 136 ~~~g~~v~L~C~~~g~~P~~~~v~W~~~-~~~~~~~-~~~~~~~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~ 211 (253)
T 3liz_H 136 AQTNSMVTLGCLVKGYFPEPVTVTWNSG-SLSSGVH-TFPAVLQS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 211 (253)
T ss_dssp ---CCEEEEEEEEEEEBSSCCEEEEGGG-TBCTTEE-ECCCEEET-TEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEE
T ss_pred cCCCCcEEEEEEEeeEeCCCeEEEEEeC-CeecceE-eCCccccC-CeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcc
Confidence 446899999999998 6766 8999998 5421100 00000111 244445689999999999 999999999988776
Q ss_pred EEEEEEEe
Q psy16261 89 GVIKVYNI 96 (158)
Q Consensus 89 ~~~~l~v~ 96 (158)
....|.+.
T Consensus 212 ~~~~~~~~ 219 (253)
T 3liz_H 212 VDKKIVPR 219 (253)
T ss_dssp EEEECCCC
T ss_pred eEEEecCc
Confidence 66666544
No 482
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.63 E-value=5.2e-08 Score=65.11 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=45.3
Q ss_pred EEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy16261 17 LTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93 (158)
Q Consensus 17 v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 93 (158)
..|.|.+.+.|.|.+.|+++ +..+....+. .|.+. ...|.|.|+|.|.|.++.......|
T Consensus 108 ~~L~C~~~~~p~p~i~W~~~-~~~l~~~~~~--------------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 108 ATLTCEVLEGTDVELKLYQG-KEHLRSLRQK--------------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp TEEEEECSSCSSCEEEEEET-TEEEEEESSS--------------EEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEeCCCCCcEEEEEEC-CEECcCCcce--------------EEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 47999999999999999999 7766432211 23333 3778999999999999887766554
No 483
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.62 E-value=6.8e-08 Score=65.04 Aligned_cols=63 Identities=17% Similarity=0.177 Sum_probs=46.1
Q ss_pred cCCCEEEEeEE-eecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCceEEEE
Q psy16261 13 LAAPLTLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVI 91 (158)
Q Consensus 13 ~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 91 (158)
.+..+.|.|.+ .| |.|.+.|+++ +..+.. .... +|.+.. .+|.|.|+|.|.|..+......
T Consensus 114 ~~~~v~L~C~~~~g-p~p~i~W~~~-~~~l~~------~~~~--------~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~ 175 (180)
T 2dru_A 114 ECSNATLTCEVLEG-TDVELKLYQG-KEHLRS------LRQK--------TMSYQW--TNLRAPFKCKAVNRVSQESEME 175 (180)
T ss_dssp EGGGTEEEEECSSC-TTCEEEEEET-TEEEEE------ESSS--------EEEEEC--SCCSSCEEEEEEETTEEEEEEE
T ss_pred cCCCEEEEEEeCCC-CCCEEEEEEC-CeECcC------CCCC--------EEEEEE--hhcCccEEEEEecCcCccccce
Confidence 45679999999 56 9999999999 766541 1111 455533 7899999999999988776554
Q ss_pred EE
Q psy16261 92 KV 93 (158)
Q Consensus 92 ~l 93 (158)
.+
T Consensus 176 ~i 177 (180)
T 2dru_A 176 VV 177 (180)
T ss_dssp CC
T ss_pred eE
Confidence 43
No 484
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.62 E-value=1.3e-08 Score=69.69 Aligned_cols=72 Identities=14% Similarity=0.242 Sum_probs=49.3
Q ss_pred CCCEEEEeEEeec-CC-CeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCCc
Q psy16261 14 AAPLTLDCHVESY-PK-PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGG 86 (158)
Q Consensus 14 g~~v~l~C~~~g~-p~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 86 (158)
|..+.|.|.+.|. |. +.++|+++ +..+............++.|...+.|.+......|.|.|+|.|.|....
T Consensus 124 ~~~~~L~C~~~g~~P~~~~v~W~k~-g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 124 KNQVSLTCLVKGFYPSDIAVEWESN-GQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEET-TEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCcEEEEEEEeCeECCCeEEEEEEC-CeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 5669999999995 44 38999999 7766432211222233344555666777766667899999999997643
No 485
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.62 E-value=8.9e-09 Score=72.13 Aligned_cols=75 Identities=16% Similarity=0.171 Sum_probs=53.6
Q ss_pred cCCCEEEEeEEeecCCC--eeEEEcCCCeeeecCCeEEEEEe------ecccceEEEEEEEcCCCCCC-CeEEEEEEEcC
Q psy16261 13 LAAPLTLDCHVESYPKP--ITFWTHENGSLIHEGSRYHMWTE------KFSSYKFYMRLYIGSLSKSD-FGTYKCNAKNT 83 (158)
Q Consensus 13 ~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~i~~v~~~d-~G~Y~C~a~n~ 83 (158)
+|+.+.|.|.+.|.|++ .+.|+++ +..+....+...... .++.|...+.|.|.....+| .|.|+|.|.|.
T Consensus 139 ~g~~v~L~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~ 217 (246)
T 4dzb_B 139 HTQKATLVCLATGFYPDHVELSWWVN-GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 217 (246)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEET-TEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEccCcCCceEEEEEEC-CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEec
Confidence 38899999999997765 8999999 877765422211110 12445555679999888888 99999999997
Q ss_pred CCceE
Q psy16261 84 LGGSE 88 (158)
Q Consensus 84 ~g~~~ 88 (158)
.....
T Consensus 218 ~~~~~ 222 (246)
T 4dzb_B 218 GLSEN 222 (246)
T ss_dssp CBCTT
T ss_pred CCCCc
Confidence 65443
No 486
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.61 E-value=3.7e-07 Score=69.99 Aligned_cols=79 Identities=16% Similarity=0.219 Sum_probs=56.0
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---eee--------------cCCeEEEEEeecccceEEEEE
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LIH--------------EGSRYHMWTEKFSSYKFYMRL 63 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~~--------------~~~~~~~~~~~~~~~~~~~~l 63 (158)
.++..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. +. .+. ...|+.+.... ....++|
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~~L 82 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDT---SATTAYM 82 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcC---CCCeEEE
Confidence 456777899999999999998865 5689999852 11 110 12344443321 0113479
Q ss_pred EEcCCCCCCCeEEEEEEEcCCC
Q psy16261 64 YIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 64 ~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
.|.+++.+|+|.|.|.+.|..|
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~ 104 (475)
T 1iga_A 83 GLSSLRPEDTAVYYCARDPYGG 104 (475)
T ss_pred EECCCChhhCEEEEEEEeccCC
Confidence 9999999999999999999865
No 487
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.61 E-value=2.9e-08 Score=79.35 Aligned_cols=83 Identities=19% Similarity=0.274 Sum_probs=60.2
Q ss_pred ceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCC-eEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcCCC
Q psy16261 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGS-RYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85 (158)
Q Consensus 7 ~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 85 (158)
..+.+.+|+.+.|.|.+.+ |.+.+.|+++ +..+.... +..+...+ .|.|.+++..|+|.|.|.|.|..+
T Consensus 541 ~~v~v~~g~~~~L~C~~~s-p~a~v~W~~~-~~~l~~~~~~~~~~~~~--------~LlI~~v~~~DsG~Y~C~A~e~~~ 610 (663)
T 1olz_A 541 RQHFFKHGGTAELKCSQKS-NLARVFWKFQ-NGVLKAESPKYGLMGRK--------NLLIFNLSEGDSGVYQCLSEERVK 610 (663)
T ss_dssp EEEEEETTSCEEECCCCSC-TTCEEEEEES-SSBCCCCSSSBCCTTTT--------CEEECSCCGGGCEEEEEEEEEECS
T ss_pred eEEEEecCCcEEEEccCCC-CCCcEEEEEC-CeeccccCcceEEecCC--------eEEEEecCcccCeEEEEEEEECcc
Confidence 4567889999999999999 9999999999 66554321 21111122 599999999999999999999853
Q ss_pred c-----eEEEEEEEEeccC
Q psy16261 86 G-----SEGVIKVYNIGYF 99 (158)
Q Consensus 86 ~-----~~~~~~l~v~~~~ 99 (158)
. ..+.+.|.|..+|
T Consensus 611 ~~~~~~~~~~~~l~V~v~P 629 (663)
T 1olz_A 611 NKTVFQVVAKHVLEVKVVP 629 (663)
T ss_dssp SSEEEEEEEEEEEEEEC--
T ss_pred CCCceEEEEEEEEEEEeCC
Confidence 3 3455666776654
No 488
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.61 E-value=2.4e-08 Score=63.46 Aligned_cols=93 Identities=16% Similarity=0.108 Sum_probs=59.9
Q ss_pred EEEecCCCEEEEeEEeecCCC-----eeEEEcCCCeeeec-CCeEEEEEee----------cccceEEEEEEEcCCCC-C
Q psy16261 9 IGARLAAPLTLDCHVESYPKP-----ITFWTHENGSLIHE-GSRYHMWTEK----------FSSYKFYMRLYIGSLSK-S 71 (158)
Q Consensus 9 ~~~~~g~~v~l~C~~~g~p~p-----~i~W~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~l~i~~v~~-~ 71 (158)
.....++++.|.|.+...+.. .+.|.++ +..+.. ++.-...... +......++|.|.+++. +
T Consensus 11 ~~t~~n~~vtLpC~l~~~~~~~~~~m~V~W~~~-~~~i~~~~G~~~~~~q~~~~~~a~l~~~~l~~GnaSL~i~~v~~~s 89 (127)
T 2jjs_C 11 EFTFGNDTVVIPCFVTNMEAQNTTEVYVKWKFK-GRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVS 89 (127)
T ss_dssp EECTTCSEEEECCBBSSCCCSSGGGEEEEEEET-TEEEEEEEGGGTEEECCGGGTTCBCCGGGGGGTBCCEEEEHHHHHT
T ss_pred EEEecCCCEEEEEEeCCcCCCCcceEEEEEEEC-CeEeEeeCCceeeccccccccceEechhhhccCcEEEEEccccccc
Confidence 345578999999999864433 6889999 554332 1110000000 01112235899999998 6
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEeccCCCC
Q psy16261 72 DFGTYKCNAKNTLGGSEGVIKVYNIGYFGSD 102 (158)
Q Consensus 72 d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 102 (158)
|.|.|+|.+.+........+.|.|...+..|
T Consensus 90 D~G~YtC~v~~~~~~~~~~i~Lkv~~~~~~~ 120 (127)
T 2jjs_C 90 HTGNYTCEVTELTREGETIIELKYRVVSWST 120 (127)
T ss_dssp SCEEEEEEEEETTEEEEEEEEEEECCC----
T ss_pred CCcEEEEEEEeCCceEEEEEEEEEEeccccC
Confidence 9999999999987777888888887765443
No 489
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.61 E-value=4.1e-07 Score=56.02 Aligned_cols=87 Identities=13% Similarity=0.056 Sum_probs=54.4
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCCCeeeec--CCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEE
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHE--GSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNA 80 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 80 (158)
...+.. .+..|+.|.|.|..... ...+.|+|+ +..... ......... .....|.|..++.+|+|.|.|..
T Consensus 13 ~a~P~~-vv~~G~~VtL~C~~~~~-~~~f~l~k~-g~~~~~~~~~~~~~~~~-----~~~~~f~i~~vt~~~aG~Y~C~~ 84 (106)
T 3kgr_A 13 SAEPGT-VIPLGSHVTFVCRGPVG-VQTFRLERE-SRSTYNDTEDVSQASPS-----ESEARFRIDSVSEGNAGPYRCIY 84 (106)
T ss_dssp EEESCS-EEETTCCEEEEEEECTT-CCEEEEEEG-GGTEEEEECCCEEEETT-----EEEEEEEESSCCGGGCEEEEEEE
T ss_pred EEeCCC-ccCCCCeEEEEEEccCC-CcEEEEEEC-CCccccccccccccCCC-----CcceEEEecCCCcCCCceEEEEe
Confidence 334444 47889999999998653 357889999 654321 111111000 11247999999999999999998
Q ss_pred EcCCCc--eEEEEEEEEec
Q psy16261 81 KNTLGG--SEGVIKVYNIG 97 (158)
Q Consensus 81 ~n~~g~--~~~~~~l~v~~ 97 (158)
.+..+. .+..+.|.|.+
T Consensus 85 ~~~~~~S~~Sdpl~L~Vtg 103 (106)
T 3kgr_A 85 YKPPKWSEQSDYLELLVKE 103 (106)
T ss_dssp EETTEECCCCCCEEEEEEC
T ss_pred eCCCcccCCCCCEEEEEeC
Confidence 875322 23345665543
No 490
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.60 E-value=1.1e-07 Score=68.54 Aligned_cols=76 Identities=17% Similarity=0.282 Sum_probs=53.1
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---eee--------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LIH--------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~~--------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+++.|.|.+.+.+ .+.+.|++.. +. .+. ...|+.+..... ....+|.|
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~sL~I 105 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKS---SSTAYMEL 105 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGG---GTEEEEEE
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCC---CCEEEEEE
Confidence 4467789999999999998876 5789999852 11 110 013443332110 01247999
Q ss_pred cCCCCCCCeEEEEEEEcCC
Q psy16261 66 GSLSKSDFGTYKCNAKNTL 84 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~~ 84 (158)
.+++.+|+|.|.|.+.|..
T Consensus 106 ~~v~~~DsG~Y~C~~~~~~ 124 (291)
T 2gki_A 106 SSLTSEDSAVYYCARGAYK 124 (291)
T ss_dssp CSCCGGGCEEEEEEEECGG
T ss_pred CcCCHHHCEEEEEEEeccc
Confidence 9999999999999999874
No 491
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.60 E-value=5.5e-07 Score=56.61 Aligned_cols=76 Identities=16% Similarity=0.242 Sum_probs=51.9
Q ss_pred cCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee-e--c-----------CCeEEEEEeecccceEEEEEE
Q psy16261 5 PSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI-H--E-----------GSRYHMWTEKFSSYKFYMRLY 64 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~-~--~-----------~~~~~~~~~~~~~~~~~~~l~ 64 (158)
.+..+.+.+|+.+.|.|.+.+.+ ...+.|++.. +. .+ . . ..|+.+..... .....|.
T Consensus 6 qp~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~ 82 (121)
T 1j05_H 6 QSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTS---SNTAYLQ 82 (121)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGG---GTEEEEE
T ss_pred CCCCEEEeCCCcEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCC---CCEEEEE
Confidence 34556789999999999998643 4689998752 11 11 1 0 13554443210 1134799
Q ss_pred EcCCCCCCCeEEEEEEEcC
Q psy16261 65 IGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 65 i~~v~~~d~G~Y~C~a~n~ 83 (158)
|.+++.+|+|.|.|.+.+.
T Consensus 83 I~~~~~~Dsg~Y~C~~~~~ 101 (121)
T 1j05_H 83 LTSLTSEDTAVYYCAPFGY 101 (121)
T ss_dssp ECSCCGGGCEEEEEEEEBT
T ss_pred ECCCCHHHCEEEEEEEEcC
Confidence 9999999999999999876
No 492
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.60 E-value=1.1e-06 Score=55.55 Aligned_cols=78 Identities=19% Similarity=0.326 Sum_probs=53.2
Q ss_pred ecCceEEEecCCCEEEEeEEeecC--CCeeEEEcCC--C--e-eee--------cCCeEEEEEeecccceEEEEEEEcCC
Q psy16261 4 IPSQLIGARLAAPLTLDCHVESYP--KPITFWTHEN--G--S-LIH--------EGSRYHMWTEKFSSYKFYMRLYIGSL 68 (158)
Q Consensus 4 ~~~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~--~--~-~~~--------~~~~~~~~~~~~~~~~~~~~l~i~~v 68 (158)
..+..+.+.+|+++.|.|...... ...+.|++.. . . .+. ...|+.+..... ....+|.|.++
T Consensus 15 ~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~---~~~~sL~I~~l 91 (122)
T 1hkf_A 15 SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPD---AGFFTVTMTDL 91 (122)
T ss_dssp CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETT---TTEEEEEECSC
T ss_pred cCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCc---CCEEEEEEeCC
Confidence 345667789999999999987532 3579998762 1 1 121 124565532211 11347999999
Q ss_pred CCCCCeEEEEEEEcCC
Q psy16261 69 SKSDFGTYKCNAKNTL 84 (158)
Q Consensus 69 ~~~d~G~Y~C~a~n~~ 84 (158)
+.+|+|.|.|.+....
T Consensus 92 ~~~Dsg~Y~C~v~~~~ 107 (122)
T 1hkf_A 92 REEDSGHYWCRIYRPS 107 (122)
T ss_dssp CGGGCEEEEEEEECTT
T ss_pred CHHHCEEEEEEEEcCC
Confidence 9999999999998764
No 493
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.60 E-value=1.5e-06 Score=60.06 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=54.6
Q ss_pred eecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---ee-e--c------CCeEEEEEeecccceEEEEEEEcCCC
Q psy16261 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LI-H--E------GSRYHMWTEKFSSYKFYMRLYIGSLS 69 (158)
Q Consensus 3 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~-~--~------~~~~~~~~~~~~~~~~~~~l~i~~v~ 69 (158)
+..+..+.+.+|+.+.|.|.+.+...+.+.|++.. +. .+ . . ..|+....... .....|.|.+++
T Consensus 7 ~Q~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~---~~~~sL~I~~~~ 83 (210)
T 2eys_A 7 EQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDAD---TKQSSLHITASQ 83 (210)
T ss_dssp EEECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETT---TTEEEEEESSCC
T ss_pred EEeCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCC---CCEEEEEEccCC
Confidence 34466778999999999999988777789998752 11 12 1 1 23444432110 112479999999
Q ss_pred CCCCeEEEEEEEcC
Q psy16261 70 KSDFGTYKCNAKNT 83 (158)
Q Consensus 70 ~~d~G~Y~C~a~n~ 83 (158)
.+|+|.|.|.+.+.
T Consensus 84 ~~Dsg~Y~C~~~~~ 97 (210)
T 2eys_A 84 LSDSASYICVVSDR 97 (210)
T ss_dssp GGGCEEEEEEEESC
T ss_pred cccCceEEEEEEcc
Confidence 99999999999874
No 494
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.59 E-value=3.8e-07 Score=57.26 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=51.9
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee---ec-----------CCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI---HE-----------GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~---~~-----------~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+.+.|.|.+.+.+ ...+.|++.. +. .+ .. ..|+.+..... ....+|.|
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I 83 (120)
T 3b9v_A 7 SGGGLVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTS---KNTAYLQM 83 (120)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGG---GTEEEEEE
T ss_pred CCCEEEeCCccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCC---CCEEEEEE
Confidence 4457789999999999997643 5689998752 11 11 10 13555543210 11247999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~~~~~Dsg~Y~C~~~~~ 101 (120)
T 3b9v_A 84 NSLRAEDTAVYYCARWGG 101 (120)
T ss_dssp CSCCGGGCEEEEEEEECT
T ss_pred CCCCHHHCEEEEEEEEcC
Confidence 999999999999999875
No 495
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.59 E-value=5.1e-07 Score=56.96 Aligned_cols=77 Identities=18% Similarity=0.278 Sum_probs=52.7
Q ss_pred eeecCceEEEecCCCEEEEeEEeecCCCeeEEEcCC-Ce---eee-c-----------CCeEEEEEeecccceEEEEEEE
Q psy16261 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHEN-GS---LIH-E-----------GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 2 i~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~-~~---~~~-~-----------~~~~~~~~~~~~~~~~~~~l~i 65 (158)
++..+..+.+.+|+++.|.|... .....+.|++.. +. .+. . ..|+.+.... ....+|.|
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~~-~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~----~~~~sL~I 78 (121)
T 2oi9_C 4 VTQSPRNKVAVTGEKVTLSCNQT-NNHNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPS----QENFSLTL 78 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCS----SSEEEEEE
T ss_pred eEeCCCeEEecCCCcEEEEEEec-CCCCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCC----CCEEEEEE
Confidence 34557778899999999999964 345689998752 11 111 0 2344443211 01247999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 79 ~~v~~~DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 79 ESATPSQTSVYFCASGGG 96 (121)
T ss_dssp SSCCGGGCEEEEEEEESS
T ss_pred CCCCHHHCEEEEEEEccC
Confidence 999999999999999875
No 496
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.59 E-value=5.5e-07 Score=56.78 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=52.1
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCCC-e---e-ee-------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHENG-S---L-IH-------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~~-~---~-~~-------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+.+.|.|.+.+.. ...+.|++... . . +. ...|+.+.... .....+|.|
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~~L~I 83 (123)
T 2wzp_D 7 SGGGLVQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDS---GKNTVYLQM 83 (123)
T ss_dssp EECEEEETTCCEEEEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEET---TEEEEEEEE
T ss_pred CCCEEEcCCCcEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeC---CCCEEEEEE
Confidence 4567799999999999997643 46799998621 1 1 11 02355554321 112357999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~~~~~Dsg~Y~C~~~~~ 101 (123)
T 2wzp_D 84 NSLKPEDTAIYYCAARSG 101 (123)
T ss_dssp CSCCGGGCEEEEEEEEES
T ss_pred CCCCHHHCEEEEEEEecC
Confidence 999999999999999875
No 497
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.59 E-value=8.2e-07 Score=55.67 Aligned_cols=75 Identities=17% Similarity=0.311 Sum_probs=51.8
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee---ec-----------CCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI---HE-----------GSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~---~~-----------~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+++.|.|...+.+ ...+.|++.. +. .+ .. ..|+.+..... ....+|.|
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I 83 (120)
T 1n4x_H 7 SGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTS---TSTAFLQI 83 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGG---GTEEEEEE
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCC---CCEEEEEE
Confidence 4457799999999999997643 4679998752 11 11 10 13555543210 11347999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~~~~~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 84 NNLKNEDTATYFCVRDRH 101 (120)
T ss_dssp CSCCGGGCEEEEEEEESS
T ss_pred CCCCHHHCEEEEEEEEcc
Confidence 999999999999999875
No 498
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.59 E-value=3.5e-07 Score=57.13 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=51.8
Q ss_pred CceEEEecCCCEEEEeEEeecC--CCeeEEEcCC-Ce---ee-e-------------cCCeEEEEEeecccceEEEEEEE
Q psy16261 6 SQLIGARLAAPLTLDCHVESYP--KPITFWTHEN-GS---LI-H-------------EGSRYHMWTEKFSSYKFYMRLYI 65 (158)
Q Consensus 6 ~~~~~~~~g~~v~l~C~~~g~p--~p~i~W~~~~-~~---~~-~-------------~~~~~~~~~~~~~~~~~~~~l~i 65 (158)
+..+.+.+|+.+.|.|.+.+.. ...+.|++.. +. .+ . ...|+.+..... ....+|.|
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~~L~I 83 (117)
T 2yc1_A 7 SGGGLVQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDA---KKTLSLQM 83 (117)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETT---TTEEEEEE
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCC---CCEEEEEE
Confidence 4457789999999999997643 4679998752 11 11 1 023555543210 11247999
Q ss_pred cCCCCCCCeEEEEEEEcC
Q psy16261 66 GSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 66 ~~v~~~d~G~Y~C~a~n~ 83 (158)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~~~~~Dsg~Y~C~~~~~ 101 (117)
T 2yc1_A 84 NSLRAEDTAVYYCARGGV 101 (117)
T ss_dssp CSCCGGGCEEEEEEEEET
T ss_pred CCCCHHHCEEEEEEEEeC
Confidence 999999999999999875
No 499
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.58 E-value=1.9e-07 Score=66.00 Aligned_cols=92 Identities=18% Similarity=0.198 Sum_probs=57.3
Q ss_pred cCceEEEecCCCEEEEeEEeec-CCCeeEEEcCC-Ceeee------------cCCeEEEEEeecccceEEEEEEEcCCCC
Q psy16261 5 PSQLIGARLAAPLTLDCHVESY-PKPITFWTHEN-GSLIH------------EGSRYHMWTEKFSSYKFYMRLYIGSLSK 70 (158)
Q Consensus 5 ~~~~~~~~~g~~v~l~C~~~g~-p~p~i~W~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 70 (158)
.+..+.+.+|+.+.|.|.+.+. |.+.+.|++.. +..+. ...|+.+...... ....|.|.+++.
T Consensus 142 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~ 218 (259)
T 3omz_A 142 AQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAA---KSVALTISALQL 218 (259)
T ss_dssp CCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGG---TBCCEEESSCCG
T ss_pred eCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcC---CEEEEEECCCCh
Confidence 3455678899999999999875 78899999852 11110 0134433321110 113599999999
Q ss_pred CCCeEEEEEEEcCCCc---e--EEEEEEEEeccC
Q psy16261 71 SDFGTYKCNAKNTLGG---S--EGVIKVYNIGYF 99 (158)
Q Consensus 71 ~d~G~Y~C~a~n~~g~---~--~~~~~l~v~~~~ 99 (158)
+|+|.|.|.+.+..+. . -..+.|.|....
T Consensus 219 ~DsG~Y~C~~~~~~~~~~~~~fg~GT~l~v~~~~ 252 (259)
T 3omz_A 219 EDSAKYFCALGESLTRADKLIFGKGTRVTVEPRS 252 (259)
T ss_dssp GGCSEEEEEEESCSSTTCCCEECCCEEEEEEC--
T ss_pred hHCEEEEEEEeCccCCCCceEECCCCEEEEeeCc
Confidence 9999999999853211 1 123566666543
No 500
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.58 E-value=3.4e-08 Score=67.76 Aligned_cols=56 Identities=20% Similarity=0.384 Sum_probs=43.9
Q ss_pred ecCCCEEEEeEEeecCCCeeEEEcCCCeeeecCCeEEEEEeecccceEEEEEEEcCCCCCCCeEEEEEEEcC
Q psy16261 12 RLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNT 83 (158)
Q Consensus 12 ~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 83 (158)
.+|+.+.|.|.+ |.+.+.|+|+ +..+.... ... ..|.|.+++.+|+|.|+|.+.+.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~-g~~l~~~~----~~~--------~~L~i~~v~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKD-GKMIGFLT----EDK--------KKWNLGSNAKDPRGMYQCKGSQN 71 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEET-TEEEEEEE----SSC--------CCEEEEEGGGCCEEEEEEESSSS
T ss_pred cCCCeEEEEEcC---CCCEEEEEEC-CEECCCCC----CCC--------CeEEeCCCCcCCCEEEEEEecCC
Confidence 479999999999 7889999999 76654210 011 26999999999999999997653
Done!