Your job contains 1 sequence.
>psy16261
MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY
MRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQYVTDEEMQRTNQIARS
KWGSERTNQIARSKWGSGYRYTSGPIRLPDPSGDPVYL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16261
(158 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0259245 - symbol:CG42343 species:7227 "Drosophila ... 226 6.2e-18 1
FB|FBgn0259714 - symbol:CG42368 species:7227 "Drosophila ... 203 1.3e-15 1
FB|FBgn0031837 - symbol:CG11320 species:7227 "Drosophila ... 130 7.4e-08 1
FB|FBgn0010238 - symbol:Lac "Lachesin" species:7227 "Dros... 122 5.0e-07 1
FB|FBgn0000071 - symbol:Ama "Amalgam" species:7227 "Droso... 121 5.6e-07 1
FB|FBgn0005666 - symbol:bt "bent" species:7227 "Drosophil... 119 1.3e-05 2
UNIPROTKB|D6RBN8 - symbol:FGFRL1 "Fibroblast growth facto... 106 1.5e-05 1
FB|FBgn0261046 - symbol:Dscam3 "Down syndrome cell adhesi... 116 2.1e-05 1
ZFIN|ZDB-GENE-000209-4 - symbol:robo3 "roundabout homolog... 111 0.00011 2
UNIPROTKB|F1P0G8 - symbol:PALLD "Uncharacterized protein"... 112 0.00017 1
UNIPROTKB|D6REM7 - symbol:FGFRL1 "Fibroblast growth facto... 91 0.00017 1
MGI|MGI:1343102 - symbol:Robo3 "roundabout homolog 3 (Dro... 104 0.00018 2
RGD|1588598 - symbol:LOC290704 "similar to palladin" spec... 110 0.00018 1
UNIPROTKB|Q3SXY7 - symbol:LRIT3 "Leucine-rich repeat, imm... 109 0.00030 1
MGI|MGI:1919583 - symbol:Palld "palladin, cytoskeletal as... 110 0.00049 1
RGD|2322545 - symbol:LOC100360205 "palladin" species:1011... 110 0.00049 1
UNIPROTKB|Q8N441 - symbol:FGFRL1 "Fibroblast growth facto... 106 0.00065 1
WB|WBGene00006759 - symbol:unc-22 species:6239 "Caenorhab... 113 0.00066 1
UNIPROTKB|F1SAE8 - symbol:NRCAM "Uncharacterized protein"... 105 0.00071 1
UNIPROTKB|F1MJW5 - symbol:PALLD "Uncharacterized protein"... 108 0.00088 1
ZFIN|ZDB-GENE-000209-3 - symbol:robo1 "roundabout homolog... 108 0.00095 2
>FB|FBgn0259245 [details] [associations]
symbol:CG42343 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
eggNOG:NOG283018 GeneTree:ENSGT00650000092858 RefSeq:NP_001138225.1
RefSeq:NP_001138226.1 UniGene:Dm.20457 SMR:B7Z153
EnsemblMetazoa:FBtr0299898 EnsemblMetazoa:FBtr0299901 GeneID:33125
KEGG:dme:Dmel_CG42343 FlyBase:FBgn0259245 OrthoDB:EOG4C5B14
GenomeRNAi:33125 NextBio:782028 Uniprot:B7Z153
Length = 555
Score = 226 (84.6 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 48/134 (35%), Positives = 79/134 (58%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY 60
++ +P+QL+GA + +TL C+VE+ PK I +W ENG +I G RY + ++ + Y
Sbjct: 312 LVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIE 371
Query: 61 MRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQYVTDEEMQRT--NQIA 118
M L+I L SDFG YKC +KN++G +EG I++Y + G + + D+++ N++
Sbjct: 372 MILHIKRLQSSDFGGYKCISKNSIGDTEGTIRLYEMERPGK--KILRDDDLNEVSKNEVV 429
Query: 119 ----RSKWGSERTN 128
RS+ GS N
Sbjct: 430 QKDTRSEDGSRNLN 443
>FB|FBgn0259714 [details] [associations]
symbol:CG42368 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00650000092858
EMBL:BT030428 RefSeq:NP_001137799.1 UniGene:Dm.18278 SMR:A4IJ70
EnsemblMetazoa:FBtr0299967 GeneID:7354433 KEGG:dme:Dmel_CG42368
FlyBase:FBgn0259714 eggNOG:NOG265313 OMA:GDEKERI OrthoDB:EOG4FFBH6
GenomeRNAi:7354433 NextBio:20902860 Uniprot:A4IJ70
Length = 467
Score = 203 (76.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWT-EKFSSYKF 59
M+ IP QL+G + +TL+C +E+ P + +WT EN +I E S+Y T SYK
Sbjct: 254 MVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTETIPGHPSYKA 313
Query: 60 YMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVY 94
MRL I ++ SD+G YKC AKN G +G IK+Y
Sbjct: 314 TMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLY 348
>FB|FBgn0031837 [details] [associations]
symbol:CG11320 species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR007110 PROSITE:PS50835
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00650000092858
eggNOG:NOG258599 EMBL:BT023406 RefSeq:NP_001097100.1
UniGene:Dm.27654 SMR:Q4V3F0 EnsemblMetazoa:FBtr0113026 GeneID:33925
KEGG:dme:Dmel_CG11320 UCSC:CG11320-RB FlyBase:FBgn0031837
InParanoid:Q4V3F0 OMA:ITWRREE OrthoDB:EOG469P98 GenomeRNAi:33925
NextBio:785954 Uniprot:Q4V3F0
Length = 376
Score = 130 (50.8 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 13 LAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72
L LTL+C ES P + FW ++ L+ GS + + ++ MR+ + ++K D
Sbjct: 244 LGQKLTLECITESQPASVNFWLRDS-QLLQGGSYESVSVDHV--FRIVMRITLRPITKRD 300
Query: 73 FGTYKCNAKNTLGGSEGVIKVYN 95
FG Y C AKN +G ++ +I V++
Sbjct: 301 FGEYICRAKNAMGQTDRIITVHH 323
>FB|FBgn0010238 [details] [associations]
symbol:Lac "Lachesin" species:7227 "Drosophila melanogaster"
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0019898 "extrinsic to
membrane" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IEP;IMP] [GO:0035151 "regulation of tube
size, open tracheal system" evidence=IMP] [GO:0035160 "maintenance
of epithelial integrity, open tracheal system" evidence=IMP]
[GO:0007156 "homophilic cell adhesion" evidence=IDA] [GO:0005918
"septate junction" evidence=IDA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IMP] [GO:0019991 "septate junction
assembly" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 EMBL:AE013599 GO:GO:0005886
GO:GO:0042803 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0005918
GO:GO:0035151 GO:GO:0019991 GO:GO:0031225 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0016331
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00650000092858
OrthoDB:EOG4GQNMQ GO:GO:0007156 MEROPS:I43.001 GO:GO:0035160
EMBL:L13255 EMBL:AY051829 EMBL:BT003177 RefSeq:NP_523713.2
RefSeq:NP_725173.1 UniGene:Dm.4470 ProteinModelPortal:Q24372
SMR:Q24372 IntAct:Q24372 MINT:MINT-316968 STRING:Q24372
PaxDb:Q24372 EnsemblMetazoa:FBtr0087933 GeneID:36363
KEGG:dme:Dmel_CG12369 CTD:36363 FlyBase:FBgn0010238
eggNOG:NOG256662 InParanoid:Q24372 OMA:SNNQHYS PhylomeDB:Q24372
GenomeRNAi:36363 NextBio:798147 Bgee:Q24372 GermOnline:CG12369
Uniprot:Q24372
Length = 359
Score = 122 (48.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY 60
+I +P +G L + L+CH+E+YP P WT ++ I + H F++ Y
Sbjct: 227 VITVPRPRLGQALQYDMDLECHIEAYPPPAIVWTKDD---IQLANNQHYSISHFATADEY 283
Query: 61 M--RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVY 94
L + ++ K +G Y C A N G +E + ++
Sbjct: 284 TDSTLRVITVEKRQYGDYVCKATNRFGEAEARVNLF 319
>FB|FBgn0000071 [details] [associations]
symbol:Ama "Amalgam" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS;IDA] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0003823 "antigen binding" evidence=NAS]
InterPro:IPR007110 PROSITE:PS50835 EMBL:AE014297 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 EMBL:M23561 EMBL:AE001572
EMBL:AY051911 PIR:A31923 RefSeq:NP_476579.1 RefSeq:NP_788589.1
UniGene:Dm.1081 ProteinModelPortal:P15364 SMR:P15364 DIP:DIP-19577N
IntAct:P15364 MINT:MINT-825062 STRING:P15364 PaxDb:P15364
EnsemblMetazoa:FBtr0081619 EnsemblMetazoa:FBtr0081620 GeneID:40831
KEGG:dme:Dmel_CG2198 UCSC:CG2198-RA CTD:40831 FlyBase:FBgn0000071
eggNOG:NOG283018 GeneTree:ENSGT00650000092858 HOGENOM:HOG000030427
InParanoid:P15364 OrthoDB:EOG4GQNMQ ChiTaRS:Ama GenomeRNAi:40831
NextBio:820823 Bgee:P15364 GermOnline:CG2198 Uniprot:P15364
Length = 333
Score = 121 (47.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
I + I ++ L+C V+ YP P W H+NG + + SR+H SS
Sbjct: 232 IAVQRPKIAQMVSHSAELECSVQGYPAPTVVW-HKNGVPL-QSSRHHEVANTASSSGTTT 289
Query: 62 R-LYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVY 94
L I S+ + DFG Y CNA N LG ++ + ++
Sbjct: 290 SVLRIDSVGEEDFGDYYCNATNKLGHADARLHLF 323
>FB|FBgn0005666 [details] [associations]
symbol:bt "bent" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0004687 "myosin light
chain kinase activity" evidence=NAS] [GO:0005200 "structural
constituent of cytoskeleton" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0007498 "mesoderm
development" evidence=IEP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008307 "structural constituent of muscle" evidence=IDA]
[GO:0030018 "Z disc" evidence=IDA] [GO:0045214 "sarcomere
organization" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00220 GO:GO:0005524
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030018 GO:GO:0007498
SUPFAM:SSF49265 SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0045214
GO:GO:0008307 InterPro:IPR013098 Pfam:PF07679 EMBL:AE014135
GeneTree:ENSGT00700000104350 GO:GO:0004687 OMA:GCKLKWK
RefSeq:NP_001162825.1 UniGene:Dm.4645 ProteinModelPortal:D1YSG0
EnsemblMetazoa:FBtr0301340 GeneID:43814 KEGG:dme:Dmel_CG32019
CTD:43814 FlyBase:FBgn0005666 GenomeRNAi:43814 NextBio:836022
Bgee:D1YSG0 Uniprot:D1YSG0
Length = 8933
Score = 119 (46.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 17 LTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76
L +C V + P P W H NG+ + E R+ + +K + ++ L I +++ D G Y
Sbjct: 136 LLFECRVNADPIPAIIWFH-NGAAVKESERHKITVDK-DVHSYFATLEILNVTVEDAGKY 193
Query: 77 KCNAKNTLGGSEGVIKV 93
K NAKN LG S I +
Sbjct: 194 KVNAKNELGESNATISL 210
Score = 117 (46.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 19 LDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKC 78
++C V++ PKP W NG +I E ++ + E+ ++Y++L + D G YKC
Sbjct: 562 MECKVKADPKPDVIW-FRNGEVIKESNKIKTFIEQRGD-QYYIKLELLDPQLEDSGLYKC 619
Query: 79 NAKNTLG 85
N KNTLG
Sbjct: 620 NIKNTLG 626
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 107 TDEEMQRTNQIARSKWGSERTNQIARSKWGSGYRYT-SGPIRLPDPSGDP 155
TD E++ N I + S R + +K G T S PI DP P
Sbjct: 5424 TDTEIRADNLIENHDY-SFRVRAV--NKQGQSQPLTTSQPITAKDPYSHP 5470
>UNIPROTKB|D6RBN8 [details] [associations]
symbol:FGFRL1 "Fibroblast growth factor receptor-like 1"
species:9606 "Homo sapiens" [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0003179 "heart valve morphogenesis"
evidence=IEA] [GO:0005007 "fibroblast growth factor-activated
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0017134 "fibroblast growth factor
binding" evidence=IEA] [GO:0060412 "ventricular septum
morphogenesis" evidence=IEA] [GO:0060539 "diaphragm development"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005886
GO:GO:0008285 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0001501 InterPro:IPR013098
Pfam:PF07679 GO:GO:0060539 GO:GO:0060412 EMBL:AC019103
GO:GO:0005007 HGNC:HGNC:3693 GO:GO:0003179 IPI:IPI00967295
ProteinModelPortal:D6RBN8 SMR:D6RBN8 Ensembl:ENST00000507339
ArrayExpress:D6RBN8 Bgee:D6RBN8 Uniprot:D6RBN8
Length = 152
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR 62
V+P Q+ ARL + L C VE P P+T WT ++G IH G W+ +F
Sbjct: 35 VVPRQV--ARLGRTVRLQCPVEGDPPPLTMWT-KDGRTIHSG-----WS-RFRVLP--QG 83
Query: 63 LYIGSLSKSDFGTYKCNAKNTLG 85
L + + + D G Y C A N G
Sbjct: 84 LKVKQVEREDAGVYVCKATNGFG 106
>FB|FBgn0261046 [details] [associations]
symbol:Dscam3 "Down syndrome cell adhesion molecule 3"
species:7227 "Drosophila melanogaster" [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007156 "homophilic cell adhesion" evidence=IC] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005887 "integral to
plasma membrane" evidence=ISM] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 UniGene:Dm.16769
GeneID:42103 KEGG:dme:Dmel_CG31190 CTD:42103 FlyBase:FBgn0261046
ChiTaRS:Dscam3 GenomeRNAi:42103 NextBio:827185 RefSeq:NP_996226.1
ProteinModelPortal:Q7KSE9 SMR:Q7KSE9 PRIDE:Q7KSE9 UCSC:CG31190-RB
InParanoid:Q7KSE9 OMA:NATAYPL ArrayExpress:Q7KSE9 Bgee:Q7KSE9
Uniprot:Q7KSE9
Length = 2046
Score = 116 (45.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 9 IGARLAAPLTLDCHVESYPKPITF-WTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGS 67
I +R P+TLDCH + +PIT WT NG + R+ + E + +L IG
Sbjct: 787 ISSRRNDPVTLDCHAKG-DEPITIGWTQNNGRIDLNNFRFSI-AEMKTEKGVDSQLTIGH 844
Query: 68 LSKSDFGTYKCNAKNTLGGSEGVI 91
+ D G Y+C A+N G +E +I
Sbjct: 845 SDRHDSGVYRCIAENPYGRAEQII 868
>ZFIN|ZDB-GENE-000209-4 [details] [associations]
symbol:robo3 "roundabout homolog 3" species:7955
"Danio rerio" [GO:0005515 "protein binding" evidence=IPI]
[GO:0016199 "axon midline choice point recognition" evidence=IMP]
[GO:0071679 "commissural neuron axon guidance" evidence=IMP]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0048675
"axon extension" evidence=IMP] [GO:0048264 "determination of
ventral identity" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI;IMP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-000209-4 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0016199 GO:GO:0048264
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048676 GO:GO:0071679
HSSP:Q9HCK4 HOGENOM:HOG000010267 HOVERGEN:HBG073476 EMBL:AF304131
IPI:IPI00932530 UniGene:Dr.77473 ProteinModelPortal:Q98SW3
SMR:Q98SW3 STRING:Q98SW3 InParanoid:Q98SW3 ArrayExpress:Q98SW3
Uniprot:Q98SW3
Length = 1419
Score = 111 (44.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH---EGSRYHMWTEKFSSYKFYM 61
PS LI ++ P TL+C E P P+ W +++G + E R H S F++
Sbjct: 69 PSDLIVSK-GEPATLNCKAEGRPTPMVEW-YKDGERVETDREDPRSHRMLLPSGSL-FFL 125
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLG 85
R+ G SK D G Y C A+N LG
Sbjct: 126 RIVHGRRSKPDEGVYVCVARNYLG 149
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 89 GVIKVYNIGYFGSDTQ 104
GVI+ Y + G+D+Q
Sbjct: 799 GVIQEYKVWCLGNDSQ 814
>UNIPROTKB|F1P0G8 [details] [associations]
symbol:PALLD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005884 "actin
filament" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101977 OMA:TRPSYIR EMBL:AADN02016397
EMBL:AADN02016398 IPI:IPI00588606 Ensembl:ENSGALT00000015714
ArrayExpress:F1P0G8 Uniprot:F1P0G8
Length = 1089
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 7 QLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIG 66
Q G P+ L+C + P P FW EN S+ H R M + + Y+ L I
Sbjct: 947 QNTGVTEGFPVRLECRISGEPSPQIFWKKENESITHNTDRVSMHQDNYG----YICLLIQ 1002
Query: 67 SLSKSDFGTYKCNAKNTLG 85
+K D G Y +AKN G
Sbjct: 1003 GATKEDAGWYTVSAKNEAG 1021
>UNIPROTKB|D6REM7 [details] [associations]
symbol:FGFRL1 "Fibroblast growth factor receptor-like 1"
species:9606 "Homo sapiens" [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0003179 "heart valve morphogenesis"
evidence=IEA] [GO:0005007 "fibroblast growth factor-activated
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0017134 "fibroblast growth factor
binding" evidence=IEA] [GO:0060412 "ventricular septum
morphogenesis" evidence=IEA] [GO:0060539 "diaphragm development"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005886
GO:GO:0008285 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0001501
InterPro:IPR013098 Pfam:PF07679 GO:GO:0060539 GO:GO:0060412
EMBL:AC019103 GO:GO:0005007 HGNC:HGNC:3693 GO:GO:0003179
IPI:IPI00967886 ProteinModelPortal:D6REM7 SMR:D6REM7
Ensembl:ENST00000512174 ArrayExpress:D6REM7 Bgee:D6REM7
Uniprot:D6REM7
Length = 80
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEG-SRYHM 49
V+P Q+ ARL + L C VE P P+T WT ++G IH G SR+ +
Sbjct: 35 VVPRQV--ARLGRTVRLQCPVEGDPPPLTMWT-KDGRTIHSGWSRFRV 79
>MGI|MGI:1343102 [details] [associations]
symbol:Robo3 "roundabout homolog 3 (Drosophila)"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006935 "chemotaxis" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016199 "axon
midline choice point recognition" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:1343102 GO:GO:0016021
GO:GO:0005886 GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0016199 Reactome:REACT_127416 InterPro:IPR013098 Pfam:PF07679
eggNOG:NOG238978 HOGENOM:HOG000010267 HOVERGEN:HBG073476
EMBL:AF060570 EMBL:BQ769335 IPI:IPI00131180 IPI:IPI00944779
PIR:T14316 UniGene:Mm.212826 ProteinModelPortal:Q9Z2I4 SMR:Q9Z2I4
STRING:Q9Z2I4 PhosphoSite:Q9Z2I4 PRIDE:Q9Z2I4 CleanEx:MM_ROBO3
Genevestigator:Q9Z2I4 Uniprot:Q9Z2I4
Length = 1366
Score = 104 (41.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/86 (33%), Positives = 41/86 (47%)
Query: 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLI---HEGSRYHMWTEKFSSYKFYM 61
P L+ +R P TL C E P+P W ++NG+ + E R H S F+
Sbjct: 70 PPDLVVSR-GEPATLPCRAEGRPRPNIEW-YKNGARVATAREDPRAHRLLLP-SGALFFP 126
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGS 87
R+ G S+ D G Y C A+N LG +
Sbjct: 127 RIVHGRRSRPDEGVYTCVARNYLGAA 152
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 117 IARSKWGSERTNQIARSK--WGSGYRYTSGPIRLPDPSGDPV 156
+A+S G N R + WG+ +GP P P P+
Sbjct: 522 VAKSSIGEATWNSWLRKQEDWGASPGPATGPSNPPGPPSQPI 563
>RGD|1588598 [details] [associations]
symbol:LOC290704 "similar to palladin" species:10116 "Rattus
norvegicus" [GO:0001726 "ruffle" evidence=IEA] [GO:0002102
"podosome" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005884 "actin filament"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 RGD:1588598 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030018 GO:GO:0030054 GO:GO:0030424 InterPro:IPR003598
SMART:SM00408 GO:GO:0030426 GO:GO:0001726 GO:GO:0002102
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000028074
eggNOG:NOG136920 HOVERGEN:HBG059166 EMBL:AC080188 EMBL:AC084353
EMBL:AC115538 IPI:IPI00959110 ProteinModelPortal:P0C5E3 SMR:P0C5E3
STRING:P0C5E3 ArrayExpress:P0C5E3 Genevestigator:P0C5E3
Uniprot:P0C5E3
Length = 603
Score = 110 (43.8 bits), Expect = 0.00018, P = 0.00018
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
P+ L+C V P P FW EN SL H R M + Y+ L I +K D G
Sbjct: 527 PVRLECRVSGVPPPQIFWKKENESLTHSTDRVSMHQDNHG----YICLLIQGATKEDAGW 582
Query: 76 YKCNAKNTLG 85
Y +AKN G
Sbjct: 583 YTVSAKNEAG 592
>UNIPROTKB|Q3SXY7 [details] [associations]
symbol:LRIT3 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
EMBL:CH471057 InterPro:IPR013098 Pfam:PF07679 EMBL:AC005509
eggNOG:NOG310852 HOGENOM:HOG000063714 HOVERGEN:HBG108105
EMBL:AK126648 EMBL:BC104037 IPI:IPI00394850 IPI:IPI00746317
RefSeq:NP_940908.3 UniGene:Hs.308127 ProteinModelPortal:Q3SXY7
SMR:Q3SXY7 PhosphoSite:Q3SXY7 DMDM:269849616 PRIDE:Q3SXY7
Ensembl:ENST00000327908 Ensembl:ENST00000379920
Ensembl:ENST00000409621 GeneID:345193 KEGG:hsa:345193
UCSC:uc003hzw.4 UCSC:uc003hzx.4 CTD:345193 GeneCards:GC04P110772
HGNC:HGNC:24783 HPA:HPA013454 neXtProt:NX_Q3SXY7
PharmGKB:PA162394355 InParanoid:Q3SXY7 OMA:RTGDHPE
OrthoDB:EOG4THVT6 GenomeRNAi:345193 NextBio:98830 Bgee:Q3SXY7
CleanEx:HS_LRIT3 Genevestigator:Q3SXY7 Uniprot:Q3SXY7
Length = 634
Score = 109 (43.4 bits), Expect = 0.00030, P = 0.00030
Identities = 37/142 (26%), Positives = 60/142 (42%)
Query: 9 IGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSL 68
I + L + + L C +P P WT + S ++ Y + E + + + +
Sbjct: 218 IMSALGSNVLLRCDATGFPTPQITWTRSDSSPVN----YTVIQESPEEGVRWSIMSLTGI 273
Query: 69 SKSDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQYVTDEEMQRTNQIARSKW----GS 124
S D G YKC AKN G SE V+ V +G T + + +RT +W GS
Sbjct: 274 SSKDAGDYKCKAKNLAGMSEAVVTVTVLGI---TTTPIPPDTSERTGD--HPEWDVQPGS 328
Query: 125 ERTNQIARSK---WGSGYRYTS 143
R+ ++ + W S + TS
Sbjct: 329 GRSTSVSSASSYLWSSSFSPTS 350
>MGI|MGI:1919583 [details] [associations]
symbol:Palld "palladin, cytoskeletal associated protein"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005884 "actin filament" evidence=ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 MGI:MGI:1919583 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030018
InterPro:IPR003598 SMART:SM00408 GO:GO:0005925 GO:GO:0005884
GO:GO:0030027 GO:GO:0001726 InterPro:IPR013098 Pfam:PF07679
GO:GO:0031083 HSSP:Q15772 HOGENOM:HOG000028074
GeneTree:ENSGT00690000101977 eggNOG:NOG136920 HOVERGEN:HBG059166
OMA:TRPSYIR ChiTaRS:PALLD EMBL:AC121881 EMBL:AC139846 EMBL:AC147616
EMBL:BC076588 EMBL:BC127081 EMBL:AK173081 EMBL:AF205078
EMBL:AK010350 EMBL:AK031696 IPI:IPI00622946 IPI:IPI00756702
IPI:IPI00856302 IPI:IPI00856926 IPI:IPI00858000 IPI:IPI00858129
RefSeq:NP_001074859.1 UniGene:Mm.29933 UniGene:Mm.458226
ProteinModelPortal:Q9ET54 SMR:Q9ET54 STRING:Q9ET54
PhosphoSite:Q9ET54 PaxDb:Q9ET54 PRIDE:Q9ET54 DNASU:72333
Ensembl:ENSMUST00000034057 Ensembl:ENSMUST00000121200
Ensembl:ENSMUST00000121493 Ensembl:ENSMUST00000121785 GeneID:72333
KEGG:mmu:72333 UCSC:uc009lud.1 UCSC:uc009lue.1 UCSC:uc009luf.1
UCSC:uc009lug.1 InParanoid:Q9ET54 OrthoDB:EOG434W5H NextBio:336044
Bgee:Q9ET54 CleanEx:MM_PALLD Genevestigator:Q9ET54 Uniprot:Q9ET54
Length = 1408
Score = 110 (43.8 bits), Expect = 0.00049, P = 0.00049
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
P+ L+C V P P FW EN SL H R M + Y+ L I +K D G
Sbjct: 1275 PVRLECRVSGVPPPQIFWKKENESLTHSTERVSMHQDNHG----YICLLIQGATKEDAGW 1330
Query: 76 YKCNAKNTLG 85
Y +AKN G
Sbjct: 1331 YTVSAKNEAG 1340
>RGD|2322545 [details] [associations]
symbol:LOC100360205 "palladin" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005884 "actin filament"
evidence=ISO] REFSEQ:XM_002728399 Ncbi:XP_002728445
Length = 1409
Score = 110 (43.8 bits), Expect = 0.00049, P = 0.00049
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
P+ L+C V P P FW EN SL H R M + Y+ L I +K D G
Sbjct: 1276 PVRLECRVSGVPPPQIFWKKENESLTHSTDRVSMHQDNHG----YICLLIQGATKEDAGW 1331
Query: 76 YKCNAKNTLG 85
Y +AKN G
Sbjct: 1332 YTVSAKNEAG 1341
>UNIPROTKB|Q8N441 [details] [associations]
symbol:FGFRL1 "Fibroblast growth factor receptor-like 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0003179 "heart valve morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0017134 "fibroblast growth factor binding"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0060539 "diaphragm development" evidence=IEA]
[GO:0005007 "fibroblast growth factor-activated receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0001558 "regulation of cell growth" evidence=NAS] [GO:0008201
"heparin binding" evidence=IDA] [GO:0008543 "fibroblast growth
factor receptor signaling pathway" evidence=IDA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0016021 GO:GO:0005886 GO:GO:0008285
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0001558
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0008201 GO:GO:0001501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0060539 MEROPS:I43.001 GO:GO:0060412 GO:GO:0005007 CTD:53834
eggNOG:NOG289609 HOGENOM:HOG000112576 HOVERGEN:HBG056473
OMA:SQQWARP OrthoDB:EOG44XJGS EMBL:AJ277437 EMBL:AF279689
EMBL:AF312678 EMBL:AY358303 EMBL:AK314365 EMBL:BC036769
IPI:IPI00296561 RefSeq:NP_001004356.1 RefSeq:NP_001004358.1
RefSeq:NP_068742.2 UniGene:Hs.193326 ProteinModelPortal:Q8N441
SMR:Q8N441 STRING:Q8N441 PhosphoSite:Q8N441 DMDM:68052359
PaxDb:Q8N441 PeptideAtlas:Q8N441 PRIDE:Q8N441 DNASU:53834
Ensembl:ENST00000264748 Ensembl:ENST00000398484
Ensembl:ENST00000504138 Ensembl:ENST00000510644 GeneID:53834
KEGG:hsa:53834 UCSC:uc003gce.3 GeneCards:GC04P001003
H-InvDB:HIX0163986 HGNC:HGNC:3693 HPA:CAB026019 MIM:605830
neXtProt:NX_Q8N441 PharmGKB:PA28132 InParanoid:Q8N441
GenomeRNAi:53834 NextBio:56170 ArrayExpress:Q8N441 Bgee:Q8N441
CleanEx:HS_FGFRL1 Genevestigator:Q8N441 GermOnline:ENSG00000127418
GO:GO:0003179 Uniprot:Q8N441
Length = 504
Score = 106 (42.4 bits), Expect = 0.00065, P = 0.00065
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 3 VIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR 62
V+P Q+ ARL + L C VE P P+T WT ++G IH G W+ +F
Sbjct: 35 VVPRQV--ARLGRTVRLQCPVEGDPPPLTMWT-KDGRTIHSG-----WS-RFRVLP--QG 83
Query: 63 LYIGSLSKSDFGTYKCNAKNTLG 85
L + + + D G Y C A N G
Sbjct: 84 LKVKQVEREDAGVYVCKATNGFG 106
>WB|WBGene00006759 [details] [associations]
symbol:unc-22 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0031672 "A band" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 SMART:SM00220 GO:GO:0005524
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF49265 SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0040011
GO:GO:0040018 GO:GO:0000003 GO:GO:0030163 GO:GO:0040015
InterPro:IPR013098 Pfam:PF07679 GO:GO:0040027 GO:GO:0031672
EMBL:Z73899 GeneTree:ENSGT00700000104350 EMBL:Z73897 EMBL:X15423
PIR:A88852 PIR:S57242 PIR:T27935 RefSeq:NP_001122835.2
RefSeq:NP_001255603.1 RefSeq:NP_001255604.1 RefSeq:NP_502273.2
RefSeq:NP_502274.2 PDB:1KOA PDB:1WIT PDB:1WIU PDB:3UTO PDBsum:1KOA
PDBsum:1WIT PDBsum:1WIU PDBsum:3UTO ProteinModelPortal:Q23551
STRING:Q23551 PaxDb:Q23551 PRIDE:Q23551 EnsemblMetazoa:ZK617.1b.1
EnsemblMetazoa:ZK617.1b.2 GeneID:178135 KEGG:cel:CELE_ZK617.1
UCSC:ZK617.1a.2 CTD:178135 WormBase:ZK617.1a WormBase:ZK617.1b
WormBase:ZK617.1c WormBase:ZK617.1d WormBase:ZK617.1e
InParanoid:Q23551 OMA:GCKLKWK EvolutionaryTrace:Q23551
NextBio:899860 ArrayExpress:Q23551 Uniprot:Q23551
Length = 7158
Score = 113 (44.8 bits), Expect = 0.00066, P = 0.00066
Identities = 27/86 (31%), Positives = 39/86 (45%)
Query: 17 LTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76
L ++CH+E+ P+P W H +G+L+ R + L I + D G Y
Sbjct: 21 LLMECHLEADPQPTIAWQH-SGNLLEPSGRVVQTLTPLGGSLYKATLVIKEPNAGDGGAY 79
Query: 77 KCNAKNTLGGSEGVIKVYNIGYFGSD 102
KC A+N LG S I + N G D
Sbjct: 80 KCTARNQLGESNANINL-NFAGAGGD 104
>UNIPROTKB|F1SAE8 [details] [associations]
symbol:NRCAM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045202 "synapse" evidence=IEA] [GO:0045162 "clustering
of voltage-gated sodium channels" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0030506
"ankyrin binding" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0019227 "neuronal action potential propagation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0010975
"regulation of neuron projection development" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005886
GO:GO:0008104 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045202 GO:GO:0007417 GO:GO:0001525 GO:GO:0016337
GO:GO:0045162 GO:GO:0010975 InterPro:IPR013098 Pfam:PF07679
GO:GO:0031290 GO:GO:0019227 GeneTree:ENSGT00690000101868
EMBL:CU856036 EMBL:CU928428 Ensembl:ENSSSCT00000016826 OMA:EDAREDY
Uniprot:F1SAE8
Length = 428
Score = 105 (42.0 bits), Expect = 0.00071, P = 0.00071
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 17 LTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76
L+L+C E P PI +W E+G+L + Y F L I ++++D G Y
Sbjct: 265 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYR---------NFKKTLQIIQVTEADSGNY 315
Query: 77 KCNAKNTLGGSEGVIKV 93
+C AKNTLG I V
Sbjct: 316 QCIAKNTLGAIHHTISV 332
>UNIPROTKB|F1MJW5 [details] [associations]
symbol:PALLD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005884 "actin filament" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0005884 InterPro:IPR013098
Pfam:PF07679 GO:GO:0031083 GeneTree:ENSGT00690000101977 OMA:TRPSYIR
EMBL:DAAA02021736 EMBL:DAAA02021737 EMBL:DAAA02021738
EMBL:DAAA02021739 EMBL:DAAA02021740 EMBL:DAAA02021741
EMBL:DAAA02021742 IPI:IPI00689005 UniGene:Bt.18314
Ensembl:ENSBTAT00000001432 NextBio:20900787 Uniprot:F1MJW5
Length = 1156
Score = 108 (43.1 bits), Expect = 0.00088, P = 0.00088
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
P+ L+C V P P FW EN SL H R M + Y+ L I +K D G
Sbjct: 1033 PVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDHHG----YVCLLIQGATKDDAGW 1088
Query: 76 YKCNAKNTLG 85
Y +AKN G
Sbjct: 1089 YTVSAKNEAG 1098
>ZFIN|ZDB-GENE-000209-3 [details] [associations]
symbol:robo1 "roundabout homolog 1" species:7955
"Danio rerio" [GO:0003262 "endocardial progenitor cell migration to
the midline involved in heart field formation" evidence=IGI]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI;IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-000209-3 GO:GO:0016021 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
HSSP:Q9HCK4 CTD:6091 HOGENOM:HOG000010267 HOVERGEN:HBG073476
KO:K06753 GO:GO:0003262 EMBL:AF304130 IPI:IPI00490621
RefSeq:NP_571556.1 UniGene:Dr.11719 ProteinModelPortal:Q98SW4
SMR:Q98SW4 IntAct:Q98SW4 STRING:Q98SW4 PRIDE:Q98SW4 GeneID:30769
KEGG:dre:30769 NextBio:20807111 ArrayExpress:Q98SW4 Bgee:Q98SW4
Uniprot:Q98SW4
Length = 1675
Score = 108 (43.1 bits), Expect = 0.00096, Sum P(2) = 0.00095
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIH---EGSRYHMWTEKFSSYKFYM 61
PS LI ++ P TL+C E P P W +++G + + R H S F++
Sbjct: 36 PSDLIVSK-GEPATLNCKAEGRPTPTVEW-YKDGERVETDRDNPRSHRMLLPTGSL-FFL 92
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLG 85
R+ G SK D G+Y C A+N LG
Sbjct: 93 RIVHGRRSKPDEGSYVCVARNYLG 116
Score = 37 (18.1 bits), Expect = 0.00096, Sum P(2) = 0.00095
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 89 GVIKVYNIGYFGSDTQY 105
GV++ Y I G++++Y
Sbjct: 771 GVVQEYKIWCLGNESRY 787
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 158 158 0.00085 106 3 11 22 0.39 32
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 596 (63 KB)
Total size of DFA: 166 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 15.08u 0.08s 15.16t Elapsed: 00:00:15
Total cpu time: 15.09u 0.08s 15.17t Elapsed: 00:00:16
Start: Thu Aug 15 11:26:13 2013 End: Thu Aug 15 11:26:29 2013