RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16261
(158 letters)
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 55.2 bits (132), Expect = 2e-11
Identities = 21/92 (22%), Positives = 29/92 (31%), Gaps = 11/92 (11%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
P ++I + +T+ C V P P W+H G R +
Sbjct: 6 EQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAK--PLSGGRATVTD---------S 54
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
L I + D G Y C A N G V
Sbjct: 55 GLVIKGVKNGDKGYYGCRATNEHGDKYFETLV 86
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 53.3 bits (127), Expect = 1e-10
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 6/92 (6%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
I+ + R + L V W + + +
Sbjct: 3 IIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENS------ENGS 56
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+L I + + G Y +N LG + + +
Sbjct: 57 KLTILAARQEHCGCYTLLVENKLGSRQAQVNL 88
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 52.1 bits (124), Expect = 3e-10
Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 5/90 (5%)
Query: 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRL 63
+ +L A + C P P W E L
Sbjct: 10 MEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWS-----L 64
Query: 64 YIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+ S+ SD G Y C +N G +
Sbjct: 65 IMESVVPSDKGNYTCVVENEYGSINHTYHL 94
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 51.8 bits (123), Expect = 3e-10
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 7/78 (8%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+ C V S P W H+ + + L I + K+D GT
Sbjct: 18 DAVIVCDVVSSLPPTIIWKHKGR-------DVILKKDVRFIVLSNNYLQIRGIKKTDEGT 70
Query: 76 YKCNAKNTLGGSEGVIKV 93
Y+C + G +
Sbjct: 71 YRCEGRILARGEINFKDI 88
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 50.4 bits (119), Expect = 2e-09
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM---RLYIGSLSKSD 72
L C P + ++G + SS+ L ++ D
Sbjct: 19 RAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFD 78
Query: 73 FGTYKCNAKNTLG 85
G Y C A+N G
Sbjct: 79 SGEYYCQAQNGYG 91
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 49.9 bits (118), Expect = 2e-09
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 11 ARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSK 70
A L +TL C + +P+P WT + EK L I ++ K
Sbjct: 17 ANLGQSVTLVCDADGFPEPTMSWTKDG----EPIENEEEDDEKHIFSDDSSELTIRNVDK 72
Query: 71 SDFGTYKCNAKNTLGGSEGVIKV 93
+D Y C A+N G + I +
Sbjct: 73 NDEAEYVCIAENKAGEQDASIHL 95
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 49.1 bits (116), Expect = 4e-09
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
I+ + + C + P P W + L T+ S+++
Sbjct: 2 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEIS- 60
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
S+ SD G Y +N+ G E +
Sbjct: 61 -----SVQASDEGNYSVVVENSEGKQEAEFTL 87
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 48.4 bits (114), Expect = 9e-09
Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 6/92 (6%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
++ C V + P+ W +
Sbjct: 4 FIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHK------DDRELKQSVKYMKRYNGNDY 57
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
L I + D G Y AKN+ G E ++ +
Sbjct: 58 GLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 89
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 48.0 bits (113), Expect = 1e-08
Identities = 12/86 (13%), Positives = 20/86 (23%), Gaps = 8/86 (9%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ ++ + +TL C T
Sbjct: 9 QEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGM--------GR 60
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGS 87
RL + S+ D G Y C G+
Sbjct: 61 RLLLRSVQLHDSGNYSCYRAGRPAGT 86
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 47.6 bits (112), Expect = 2e-08
Identities = 13/84 (15%), Positives = 18/84 (21%), Gaps = 5/84 (5%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
I Q + V P P W + Y W E
Sbjct: 7 IFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIR 66
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLG 85
++ D + A N G
Sbjct: 67 D-----VTGEDSASIMVKAINIAG 85
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 47.3 bits (111), Expect = 2e-08
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHM--WTEKFSSYKFYMRLYIGSLSKSDF 73
L C + P + ++G ++ + + L LS SD
Sbjct: 19 RAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDT 78
Query: 74 GTYKCNAKNTLGGSE 88
G Y C A+N G
Sbjct: 79 GEYSCEARNGYGTPM 93
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 47.2 bits (111), Expect = 2e-08
Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Query: 18 TLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY-MRLYIGSLSKSDFGTY 76
+ V+ P P W L + + E ++ L + + + G Y
Sbjct: 19 CIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 78
Query: 77 KCNAKNTLGGSEGVIKV 93
A N G + I
Sbjct: 79 TLLAANPFGQASASIMA 95
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 47.8 bits (112), Expect = 2e-08
Identities = 16/101 (15%), Positives = 24/101 (23%), Gaps = 23/101 (22%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTE----------------------- 52
L LD + P P W +R
Sbjct: 26 KLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRV 85
Query: 53 KFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+ + K + K D G Y KN +G + + V
Sbjct: 86 RVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTV 126
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 45.0 bits (105), Expect = 1e-07
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
P+ L+C VE +P W + S + L + S+ +SD G
Sbjct: 13 PVKLNCSVEGMEEPDIQWVKDG----AVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGR 68
Query: 76 YKCNAKNTLG 85
Y C ++
Sbjct: 69 YWCQVEDGGE 78
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 45.2 bits (106), Expect = 1e-07
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 12/92 (13%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
A +TL+C P P W ++
Sbjct: 8 KAKFPADTYALTGQMVTLECFAFGNPVPQIKWRK------------LDGSQTSKWLSSEP 55
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
L+I ++ D GTY+C A+N G ++
Sbjct: 56 LLHIQNVDFEDEGTYECEAENIKGRDTYQGRI 87
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 45.0 bits (105), Expect = 2e-07
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 16 PLTLDCHVESYPKPITFWTHE---NGSLIHEGSRYHMWTE----KFSSYKFYMRLYIGSL 68
+ C V S +P W NGS ++ ++ K LYI ++
Sbjct: 22 DVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRNV 81
Query: 69 SKSDFGTYKCNAKNTLGGSEGVIKVY 94
+ D G Y C A N++G S +
Sbjct: 82 TFEDAGEYTCLAGNSIGISFHSAWLT 107
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 44.4 bits (103), Expect = 3e-07
Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 7/100 (7%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYH------MWTEKF 54
++ ++ + L + + L C+V I +W + +
Sbjct: 4 IVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 63
Query: 55 SSYKFYMRLYIGSLSKSDFGT-YKCNAKNTLGGSEGVIKV 93
L I + + + C AKNT G I++
Sbjct: 64 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 103
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 44.2 bits (103), Expect = 3e-07
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 6/92 (6%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
I+ S+ I + L+ P P WT + +
Sbjct: 5 ILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTV------GDSGAALAPELLVDAKSSTT 58
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
++ S ++D G YK KN LG E + +V
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGEDEAIFEV 90
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 44.1 bits (103), Expect = 3e-07
Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 10/78 (12%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
L C P+P W + L L D G
Sbjct: 18 DLRWSCVASGKPRPAVRWLR----------DGQPLASQNRIEVSGGELRFSKLVLEDSGM 67
Query: 76 YKCNAKNTLGGSEGVIKV 93
Y+C A+N G ++
Sbjct: 68 YQCVAENKHGTVYASAEL 85
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 43.9 bits (102), Expect = 4e-07
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 16 PLTLDCHVESYP-KPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74
P L+C V+ +P W NG+ + ++ + F++ + + +D G
Sbjct: 20 PFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFIL-HFEPVLPNDNG 78
Query: 75 TYKCNAKNTLG 85
+Y+C+A
Sbjct: 79 SYRCSANFQSN 89
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 43.8 bits (102), Expect = 5e-07
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 18 TLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYK 77
+ V+ PKP W + NG++++E + +++ L + + + + G Y
Sbjct: 20 CIPFTVKGNPKPALQWFY-NGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYT 78
Query: 78 CNAKNTLGGSEGVIKV 93
AKN G E I
Sbjct: 79 LIAKNEYGKDEKQISA 94
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 43.0 bits (100), Expect = 8e-07
Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 7/70 (10%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+TL C + P W L + + + D G+
Sbjct: 24 KVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV-------AGDLVISNPVKAKDAGS 76
Query: 76 YKCNAKNTLG 85
Y+C A N G
Sbjct: 77 YQCVATNARG 86
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 43.0 bits (100), Expect = 1e-06
Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
DC VE YP P W ++ + + E+ + + D
Sbjct: 25 AARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEV-----CGDDDAK 79
Query: 76 YKCNAKNTLGGSEGVIKV 93
Y C A N+LG + ++
Sbjct: 80 YTCKAVNSLGEATCTAEL 97
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 42.1 bits (98), Expect = 1e-06
Identities = 13/85 (15%), Positives = 20/85 (23%), Gaps = 5/85 (5%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY 60
M+ + A + L+C V S W E +
Sbjct: 2 MVTKQLEDTTAYCGERVELECEV-SEDDANVKWFKNG----EEIIPGPKSRYRIRVEGKK 56
Query: 61 MRLYIGSLSKSDFGTYKCNAKNTLG 85
L I +K+D Y
Sbjct: 57 HILIIEGATKADAAEYSVMTTGGQS 81
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 40.0 bits (92), Expect = 8e-06
Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 6/84 (7%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ + R P L+C +E + + + ++G + K
Sbjct: 5 LKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAAL------RKDEG 58
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLG 85
L SD G Y+C A+ G
Sbjct: 59 SLVFLRPQASDEGHYQCFAETPAG 82
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 39.9 bits (92), Expect = 1e-05
Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Query: 4 IPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRL 63
S+ + A+ + C S P + + + S RL
Sbjct: 8 YVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGK----RL 63
Query: 64 YIGSLSKSDFGTYKCNAKNTLGGSE 88
+ D G Y C N +G +
Sbjct: 64 LFKTTLPEDEGVYTCEVDNGVGKPQ 88
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 39.6 bits (91), Expect = 2e-05
Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
T C + + + SS +F + + +K D G
Sbjct: 18 FATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKV---TSSRRFIASFNVVNTTKRDAGK 74
Query: 76 YKCNAKNTLG 85
Y+C + G
Sbjct: 75 YRCMIRTEGG 84
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 39.6 bits (91), Expect = 2e-05
Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 17/109 (15%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKP-----------------ITFWTHENGSLIHEG 44
++ P I A + L C + + + +
Sbjct: 5 VIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPE 64
Query: 45 SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
R K S + + L I ++ SD G Y C ++ E +++
Sbjct: 65 YRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVEL 113
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 38.8 bits (89), Expect = 3e-05
Identities = 15/76 (19%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Query: 18 TLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYK 77
++ V P P W H S+ L + + G Y
Sbjct: 21 CIEFVVRGNPPPTLHWLH--NGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYT 78
Query: 78 CNAKNTLGGSEGVIKV 93
AKN LG + I
Sbjct: 79 LIAKNPLGTANQTING 94
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 38.9 bits (89), Expect = 4e-05
Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 6/99 (6%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKP----ITFWTHENGSLIHEGSRYHMWTEKF-- 54
+ + Q ++ +T V++ I ++ + L + ++ E F
Sbjct: 2 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFER 61
Query: 55 SSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
S + + I + G Y+C +
Sbjct: 62 HSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDL 100
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 38.0 bits (87), Expect = 5e-05
Identities = 17/93 (18%), Positives = 26/93 (27%), Gaps = 10/93 (10%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
V + R A +T C +S T +
Sbjct: 5 TVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNG---------- 54
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVY 94
L I ++ SD GTY C N +G ++
Sbjct: 55 ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 87
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 37.9 bits (87), Expect = 6e-05
Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 6/67 (8%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+ L + + W + GS+Y + L I S +D
Sbjct: 23 KIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGA-----KRTLTISQCSLADDAA 76
Query: 76 YKCNAKN 82
Y+C
Sbjct: 77 YQCVVGG 83
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 37.6 bits (86), Expect = 6e-05
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR--- 62
SQ I + +T K + + ++ E S + ++ +
Sbjct: 2 SQQIYGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGS 61
Query: 63 LYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
L I +L+ SD Y+ + N + + V
Sbjct: 62 LTIYNLTSSDEDEYEMESPNITDTMKFFLYV 92
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 37.8 bits (86), Expect = 7e-05
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY- 60
+ + P+ L C + P W + G + T + +
Sbjct: 7 VHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL 66
Query: 61 -MRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+ S+++ D GTY C G S G +KV
Sbjct: 67 PTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKV 100
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 37.8 bits (86), Expect = 9e-05
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWT-HENGSLIHEGSRYHMWTEKFSSYKFY 60
I+ +Q A + C + S P P + L S + +
Sbjct: 9 IISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVI 68
Query: 61 MRLYIGSLSKS-DFGTYKCNAKNTLGGSEGVIKV 93
L I ++ ++ Y C A N+ G +I++
Sbjct: 69 STLTISNIVRADFQTIYNCTAWNSFGSDTEIIRL 102
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 36.6 bits (83), Expect = 2e-04
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 10/98 (10%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGS------LIHEGSRYHMWTEKFS 55
+ L C ES P + ++ + SR+ + + +
Sbjct: 5 VKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGR 64
Query: 56 SYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
S L + + G Y+CN ++ G + +I +
Sbjct: 65 SELHIENLNMEADP----GQYRCNGTSSKGSDQAIITL 98
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 36.6 bits (83), Expect = 2e-04
Identities = 13/99 (13%), Positives = 27/99 (27%), Gaps = 6/99 (6%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYP---KPITFWTHENGSLIHEGSRYHMW---TEKF 54
+ V+ Q + +T V P+ W + H+ +
Sbjct: 6 LFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDR 65
Query: 55 SSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+S + L+I + G Y+C +
Sbjct: 66 ASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNL 104
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 36.5 bits (83), Expect = 2e-04
Identities = 10/90 (11%), Positives = 23/90 (25%), Gaps = 5/90 (5%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVE-SYPKPITFWT-HENGSLIHEGSRYHMWTEKFSSYKF 59
+++ Q + T++C V P +H + + +
Sbjct: 5 VILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAA---PAPQEA 61
Query: 60 YMRLYIGSLSKSDFGTYKCNAKNTLGGSEG 89
+ + + C A L G
Sbjct: 62 TATFNSTADREDGHRNFSCLAVLDLMSRGG 91
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 36.6 bits (83), Expect = 2e-04
Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR--LYIGSLSKSDF 73
P LDC + + + S + + + ++ + SD
Sbjct: 19 PFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDI 78
Query: 74 GTYKCNAKNTLGGSEGVIKVYNI 96
Y C AKN E V+ Y I
Sbjct: 79 YKYVCTAKNAAVDEEVVLVEYEI 101
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 35.8 bits (81), Expect = 3e-04
Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ + + L C + P W GS T ++ +
Sbjct: 4 VYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS 63
Query: 62 R--LYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+ S+++ D G Y C G + G + +
Sbjct: 64 SSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSI 97
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 34.8 bits (79), Expect = 7e-04
Identities = 8/82 (9%), Positives = 16/82 (19%), Gaps = 7/82 (8%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ P + + + + S P W +
Sbjct: 4 VEKPLYGVEVFVGETAHFEIEL-SEPDVHGQWKL------KGQPLTASPDCEIIEDGKKH 56
Query: 62 RLYIGSLSKSDFGTYKCNAKNT 83
L + + G A N
Sbjct: 57 ILILHNCQLGMTGEVSFQAANA 78
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 33.7 bits (76), Expect = 0.002
Identities = 10/79 (12%), Positives = 19/79 (24%), Gaps = 7/79 (8%)
Query: 16 PLTLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74
C + + K W ++ + + L+ D G
Sbjct: 19 IDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK------LWFVPAKVEDSG 72
Query: 75 TYKCNAKNTLGGSEGVIKV 93
Y C +N+ I
Sbjct: 73 HYYCVVRNSSYCLRIKISA 91
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 33.3 bits (75), Expect = 0.003
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 9/84 (10%)
Query: 10 GARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLS 69
L P E+ P W + L+ + + ++ L + +++
Sbjct: 16 DGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR---------LIVMNVA 66
Query: 70 KSDFGTYKCNAKNTLGGSEGVIKV 93
+ G Y C+A T G + I
Sbjct: 67 EKHRGNYTCHASYTYLGKQYPITR 90
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 31.9 bits (71), Expect = 0.008
Identities = 11/73 (15%), Positives = 20/73 (27%), Gaps = 9/73 (12%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
L C +S + + L I +LS+ D G
Sbjct: 14 TAELKCSQKSNLARVFWKFQNG---------VLKAESPKYGLMGRKNLLIFNLSEGDSGV 64
Query: 76 YKCNAKNTLGGSE 88
Y+C ++ +
Sbjct: 65 YQCLSEERVKNKT 77
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 31.9 bits (71), Expect = 0.008
Identities = 8/56 (14%), Positives = 16/56 (28%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKS 71
T C P P + + G + + +Y R G +++
Sbjct: 21 QQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTRE 76
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 32.2 bits (72), Expect = 0.009
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 18 TLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR--------LYIGSL 68
TL C S + + + + YK + I +L
Sbjct: 13 TLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILAL 72
Query: 69 SKSDFGTYKCNAKNTLGGSEGVI 91
SD GTY+C +
Sbjct: 73 RPSDEGTYECVVLKYEKDAFKRE 95
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 30.9 bits (69), Expect = 0.023
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 17 LTLDCHVE--SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLY--IGSLSKSD 72
LT++C + SY T W + +E S + I L+ D
Sbjct: 17 LTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVED 76
Query: 73 FGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQYVT 107
GTY+C G + + G T VT
Sbjct: 77 GGTYRCGLGVAGGYCDYALCSSRYAECGDGTA-VT 110
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 30.6 bits (68), Expect = 0.023
Identities = 8/57 (14%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Query: 29 PITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85
+T S E + + + +I + + +D G Y+C +
Sbjct: 22 SVTLKCQGAYS--PEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTL 76
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 30.4 bits (68), Expect = 0.033
Identities = 12/65 (18%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Query: 18 TLDCHVES-YPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76
L C V P I E+G ++ T++ L + TY
Sbjct: 25 QLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTY 84
Query: 77 KCNAK 81
C
Sbjct: 85 TCQVT 89
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 30.1 bits (67), Expect = 0.041
Identities = 10/77 (12%), Positives = 20/77 (25%), Gaps = 11/77 (14%)
Query: 18 TLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR----------LYIG 66
L C + + ++ + + + R L I
Sbjct: 13 ELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIK 72
Query: 67 SLSKSDFGTYKCNAKNT 83
+L D TY C ++
Sbjct: 73 NLKIEDSDTYICEVEDQ 89
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus),
alpha-chain [TaxId: 10090]}
Length = 113
Score = 29.8 bits (66), Expect = 0.061
Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 17/108 (15%)
Query: 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKF--------SS 56
PS L L C+ + + + ++ + + T++ S
Sbjct: 8 PSALS-LHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSE 66
Query: 57 YKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQ 104
Y L+I D GTY C A+ + G FGS TQ
Sbjct: 67 RARYSTLHIRDAQLEDSGTYFCAAEASSG--------SWQLIFGSGTQ 106
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 29.5 bits (65), Expect = 0.062
Identities = 9/70 (12%), Positives = 15/70 (21%), Gaps = 13/70 (18%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+ L CH + +NG ++ + S G
Sbjct: 17 TIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIP-------------QANHSHSGD 63
Query: 76 YKCNAKNTLG 85
Y C
Sbjct: 64 YHCTGNIGYT 73
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 29.2 bits (64), Expect = 0.064
Identities = 13/64 (20%), Positives = 21/64 (32%)
Query: 31 TFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGV 90
NG+ E S + S + L I + D G YKC +
Sbjct: 18 NVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVY 77
Query: 91 IKVY 94
++V+
Sbjct: 78 LEVF 81
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 29.1 bits (64), Expect = 0.086
Identities = 13/71 (18%), Positives = 17/71 (23%), Gaps = 8/71 (11%)
Query: 16 PLTLDCHVE-SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74
LTL C VE P+ G E R E +
Sbjct: 21 QLTLRCQVEGGAPRAQLTVVLLRG--EKELKREPAVGEPAEVT-----TTVLVRRDHHGA 73
Query: 75 TYKCNAKNTLG 85
+ C + L
Sbjct: 74 QFSCRTELDLR 84
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 29.6 bits (65), Expect = 0.095
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 45 SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
R H + S + + +L SD GTY+C K G + I +
Sbjct: 74 GRVHFTSNDLKSGDAS--INVTNLQLSDIGTYQCKVKKAPGVANKKIHL 120
>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 102
Score = 28.4 bits (63), Expect = 0.17
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 17 LTLDCHVES-YPKPITF-WTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFG 74
+TL C V P+ I WT+ NG + SY Y +L + + +
Sbjct: 22 VTLTCMVTDFMPEDIYVEWTN-NGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERN 80
Query: 75 TYKCNAK 81
+Y C+
Sbjct: 81 SYSCSVV 87
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 28.1 bits (62), Expect = 0.21
Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 13/90 (14%)
Query: 18 TLDCH-VESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR---------LYIGS 67
L H + ++ ++ E +R+ + + + Y L
Sbjct: 18 LLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQM 77
Query: 68 LSKSDFGTYKCNAKNTLGGSE---GVIKVY 94
++ D G Y + + V+
Sbjct: 78 ITMKDMGVYTLDMTDENYRRTQATVRFHVH 107
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 28.1 bits (61), Expect = 0.22
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 9/73 (12%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+TL C I + + TE+ + + L I + + D G
Sbjct: 20 SVTLTCLSNDIGANIQWLFNSQ---------SLQLTERMTLSQNNSILRIDPIKREDAGE 70
Query: 76 YKCNAKNTLGGSE 88
Y+C N +
Sbjct: 71 YQCEISNPVSVRR 83
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 28.1 bits (61), Expect = 0.22
Identities = 11/81 (13%), Positives = 23/81 (28%), Gaps = 5/81 (6%)
Query: 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLY 64
+ + C + +++ N + + + + LY
Sbjct: 10 ERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGN-----LY 64
Query: 65 IGSLSKSDFGTYKCNAKNTLG 85
I SD G Y C A + +
Sbjct: 65 IAKTEASDLGNYSCFATSHID 85
>d1q88a_ e.47.1.1 (A:) 39 kda initiator binding protein, IBP39,
C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
Length = 192
Score = 28.4 bits (63), Expect = 0.30
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 87 SEGVIKVYNIGYFGSDTQYVTDE 109
G+ K++N + QY+ DE
Sbjct: 142 PTGIRKIWNKPLIEATGQYLMDE 164
>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 27.3 bits (60), Expect = 0.38
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 18 TLDCHVES-YPKPITF-WTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+L C V+ YP I W NG + + S+ Y +L +
Sbjct: 23 SLTCLVKGFYPSDIAVEWES-NGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNV 81
Query: 76 YKCNAK 81
+ C+
Sbjct: 82 FSCSVM 87
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 27.3 bits (59), Expect = 0.41
Identities = 14/70 (20%), Positives = 19/70 (27%), Gaps = 13/70 (18%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
PL L CH Y+ E + + I + + D GT
Sbjct: 17 PLFLRCHGWRNWDVYKVI-------------YYKDGEALKYWYENHNISITNATVEDSGT 63
Query: 76 YKCNAKNTLG 85
Y C K
Sbjct: 64 YYCTGKVWQL 73
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 27.0 bits (59), Expect = 0.44
Identities = 15/86 (17%), Positives = 23/86 (26%), Gaps = 5/86 (5%)
Query: 6 SQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMR--- 62
S + L + L+ I S F +
Sbjct: 2 SGTVWGALGHGINLNIPNFQMTDDID-EVRWERGSTLVAEFKRKMKPFLKSGAFEILANG 60
Query: 63 -LYIGSLSKSDFGTYKCNAKNTLGGS 87
L I +L++ D GTY +T G
Sbjct: 61 DLKIKNLTRDDSGTYNVTVYSTNGTR 86
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 104
Score = 26.9 bits (59), Expect = 0.51
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 18 TLDCHV-ESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76
TL C V + YP T NG+ I++G + +++ +Y L + +
Sbjct: 24 TLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRV 83
Query: 77 KCNAK 81
C
Sbjct: 84 SCQVT 88
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 26.6 bits (57), Expect = 0.57
Identities = 11/93 (11%), Positives = 23/93 (24%), Gaps = 7/93 (7%)
Query: 1 MIVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFY 60
+ + + + L C VE W + +
Sbjct: 4 TLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANV 63
Query: 61 MRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
+ C A+N +G +E ++V
Sbjct: 64 TSDL-------NRKNVTCWAENDVGRAEVSVQV 89
>d1cqka_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 26.9 bits (59), Expect = 0.61
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 17 LTLDCHVES-YPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
++L C + +P+ IT NG + SY Y +L + + T
Sbjct: 21 VSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNT 80
Query: 76 YKCNAK 81
+ C+
Sbjct: 81 FTCSVL 86
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 26.2 bits (56), Expect = 0.75
Identities = 12/92 (13%), Positives = 24/92 (26%), Gaps = 10/92 (10%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ P ++ L A L C + + + S
Sbjct: 6 VEPPEPVVAVALGASRQLTCRLACADRGASVQWR----------GLDTSLGAVQSDTGRS 55
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKV 93
L + + S S GT C + +++
Sbjct: 56 VLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 87
>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor
NKp46 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 26.2 bits (57), Expect = 0.94
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Query: 16 PLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
+T+ C + + L EGS + + K ++ YI ++ G
Sbjct: 20 QVTICCQ--GNYGAVEYQ------LHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQ 71
Query: 76 YKCNAKNTLGGSE 88
Y C + SE
Sbjct: 72 YSCIYRVGELWSE 84
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 26.1 bits (56), Expect = 0.99
Identities = 12/84 (14%), Positives = 21/84 (25%), Gaps = 14/84 (16%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ + + AP L C P+P+T + I +
Sbjct: 4 FTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLN--------- 54
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLG 85
+ + C A N G
Sbjct: 55 -----VTGVTQSTMFSCEAHNLKG 73
>d1vesa_ b.1.1.1 (A:) Novel antigen receptor 12Y-2 {Spotted
wobbegong (Orectolobus maculatus) [TaxId: 168098]}
Length = 113
Score = 26.0 bits (56), Expect = 1.1
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 17 LTLDCHVE----SYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSD 72
LT++C + + T + S + E + L I L D
Sbjct: 18 LTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVED 77
Query: 73 FGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQYVT 107
GTYKC A +L + + G G+ T +T
Sbjct: 78 SGTYKCQAFYSLPLGDYNYSLLFRGEKGAGTA-LT 111
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 26.0 bits (56), Expect = 1.2
Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 21 CHVESYPKPITFWTHENGSLIHEGSRYHMWTE-KFSSYKFYMRLYIGSLSKSDFGTYKCN 79
F + I E + + + I +L SD GT+ C+
Sbjct: 40 QPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCD 99
Query: 80 AKNT--LGGSEGVIKV 93
KN + G + +
Sbjct: 100 VKNPPDIVGKTSQVTL 115
>d1xiwb_ b.1.1.4 (B:) CD3 delta chain ectodomain fragment {Human
(Homo sapiens) [TaxId: 9606]}
Length = 74
Score = 25.2 bits (55), Expect = 1.6
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 62 RLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVY 94
RL +G G Y+CN + E ++V+
Sbjct: 36 RLDLGKRILDPRGIYRCNGTDIYKDKESTVQVH 68
>d1xaua_ b.1.1.4 (A:) B and T lymphocyte attenuator, Btla {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 104
Score = 24.6 bits (53), Expect = 3.2
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 16 PLTLDCHVE-SYPKPITFWTHENGS----LIHEGSRYHMWTEKFSSYKFYMRLYIGSLSK 70
++C V+ +P W NG+ L Y W E S F L+ +
Sbjct: 20 LFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFV--LHFKPIHL 77
Query: 71 SDFGTYKCNA 80
SD G+Y C+
Sbjct: 78 SDNGSYSCST 87
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 24.8 bits (53), Expect = 3.5
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 13/87 (14%)
Query: 18 TLDCHVES--------YPKPITFWTHENGSLIHEGS-RYHMWTEKFSSYKFYMR----LY 64
L C + + + ++ G ++ K+ + L
Sbjct: 13 DLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLR 72
Query: 65 IGSLSKSDFGTYKCNAKNTLGGSEGVI 91
+ +L D G Y+C + I
Sbjct: 73 LHNLQIKDKGLYQCIIHHKKPTGMIRI 99
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 226
Score = 25.1 bits (54), Expect = 3.6
Identities = 11/93 (11%), Positives = 23/93 (24%), Gaps = 10/93 (10%)
Query: 26 YPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLG 85
Y PI +L +++ F + S +
Sbjct: 48 YSAPIQINDRTIDNL----------ASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPK 97
Query: 86 GSEGVIKVYNIGYFGSDTQYVTDEEMQRTNQIA 118
+ ++N + D V +N+I
Sbjct: 98 LKGRYLGLFNTTNYDRDAHTVAVVFDTVSNRIE 130
>d1f3rb2 b.1.1.1 (B:139-257) Immunoglobulin light chain kappa
variable domain, VL-kappa {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 119
Score = 24.4 bits (52), Expect = 4.5
Identities = 20/87 (22%), Positives = 25/87 (28%), Gaps = 9/87 (10%)
Query: 5 PSQLIGARLAAPLTLDCHVESYPKPITFWTHENGS-----LIHEGSRYHM---WTEKFSS 56
PS L A + +TL C W + LI+ + S
Sbjct: 8 PSLLS-ASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG 66
Query: 57 YKFYMRLYIGSLSKSDFGTYKCNAKNT 83
L I SL D TY C N
Sbjct: 67 SGTDYTLTISSLQPEDVATYFCYQYNN 93
>d1dr9a2 b.1.1.3 (A:106-200) CD80, second domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 95
Score = 24.1 bits (51), Expect = 4.9
Identities = 8/66 (12%), Positives = 18/66 (27%), Gaps = 3/66 (4%)
Query: 17 LTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYMRLYIGSLSKSDFGTY 76
+ C ENG ++ + + Y +L + + ++
Sbjct: 19 RRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDF---NMTTNHSF 75
Query: 77 KCNAKN 82
C K
Sbjct: 76 MCLIKY 81
>d1rzfl2 b.1.1.2 (L:109-210) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 24.2 bits (52), Expect = 5.1
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 18 TLDCHVES-YPKPITFWTHENGSLIHEG-SRYHMWTEKFSSYKFYMRLYIGSLSKSDFGT 75
TL C + YP +T + S + G + + Y L + +
Sbjct: 24 TLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRS 83
Query: 76 YKCNAK 81
Y C
Sbjct: 84 YSCQVT 89
>d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus
acidocaldarius [TaxId: 405212]}
Length = 308
Score = 24.9 bits (52), Expect = 5.3
Identities = 7/61 (11%), Positives = 19/61 (31%), Gaps = 5/61 (8%)
Query: 2 IVIPSQLIGARLAAPLTLDCHVESYPKPITFWTHENGSLIHEGSRYHMWTEKFSSYKFYM 61
+ +P + + R+ P P P + H G ++ + + + +
Sbjct: 51 MDLPGRTLKVRMYRP-----EGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAV 105
Query: 62 R 62
Sbjct: 106 V 106
>d1q79a3 d.58.16.1 (A:365-498) Poly(A) polymerase, PAP, C-terminal
domain {Cow (Bos taurus) [TaxId: 9913]}
Length = 134
Score = 24.1 bits (52), Expect = 6.5
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 54 FSSYKFYMRLYIGSLSKSDFGTYK 77
F YK Y+ L + ++ +
Sbjct: 4 FQKYKHYIVLLASAPTEKQRLEWV 27
>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 110
Score = 23.8 bits (51), Expect = 7.6
Identities = 17/113 (15%), Positives = 32/113 (28%), Gaps = 27/113 (23%)
Query: 5 PSQLIGARLAAPLTLDCHVESY-------------PKPITFWTHENGSLIHEGSRYHMWT 51
P + A +TL C + + +++ G+
Sbjct: 8 PRNKV-AVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDIPDGYEA 66
Query: 52 EKFSSYKFYMRLYIGSLSKSDFGTYKCNAKNTLGGSEGVIKVYNIGYFGSDTQ 104
+ S +F L + S + S Y C + YFG+ T+
Sbjct: 67 SRPSQEQFS--LILESATPSQTSVYFCASGGG-----------GTLYFGAGTR 106
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.422
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 618,820
Number of extensions: 26343
Number of successful extensions: 188
Number of sequences better than 10.0: 1
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 89
Length of query: 158
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 80
Effective length of database: 1,336,656
Effective search space: 106932480
Effective search space used: 106932480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.2 bits)