Your job contains 1 sequence.
>psy16262
MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL
AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR
LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR
EVLRFRGVIGPDYLTILGTYIDCSPYIPTYPNAVLSCGIVEV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16262
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003517 - symbol:sta "stubarista" species:7227 "Dr... 833 3.9e-83 1
UNIPROTKB|P50890 - symbol:RPSA "40S ribosomal protein SA"... 802 7.6e-80 1
UNIPROTKB|Q6P8D1 - symbol:rpsa "40S ribosomal protein SA"... 801 9.7e-80 1
RGD|71026 - symbol:Rpsa "ribosomal protein SA" species:10... 800 1.2e-79 1
ZFIN|ZDB-GENE-040426-811 - symbol:rpsa "ribosomal protein... 796 3.3e-79 1
UNIPROTKB|P26452 - symbol:RPSA "40S ribosomal protein SA"... 794 5.4e-79 1
UNIPROTKB|E2RJ06 - symbol:RPSA "Uncharacterized protein" ... 794 5.4e-79 1
UNIPROTKB|J9JHJ2 - symbol:RPSA "Uncharacterized protein" ... 794 5.4e-79 1
UNIPROTKB|C9J9K3 - symbol:RPSA "40S ribosomal protein SA"... 794 5.4e-79 1
UNIPROTKB|P08865 - symbol:RPSA "40S ribosomal protein SA"... 794 5.4e-79 1
UNIPROTKB|Q4GWZ2 - symbol:RPSA "40S ribosomal protein SA"... 794 5.4e-79 1
UNIPROTKB|A6YRY8 - symbol:RPSA "40S ribosomal protein SA"... 794 5.4e-79 1
UNIPROTKB|Q2L9X0 - symbol:RPSA "40S ribosomal protein SA"... 794 5.4e-79 1
MGI|MGI:105381 - symbol:Rpsa "ribosomal protein SA" speci... 794 5.4e-79 1
UNIPROTKB|P38982 - symbol:Rpsa "40S ribosomal protein SA"... 788 2.3e-78 1
UNIPROTKB|A6NE09 - symbol:RPSAP58 "Protein RPSAP58" speci... 781 1.3e-77 1
ZFIN|ZDB-GENE-050417-382 - symbol:zgc:110181 "zgc:110181"... 737 5.9e-73 1
UNIPROTKB|I3LC48 - symbol:RPSA "40S ribosomal protein SA"... 730 3.2e-72 1
WB|WBGene00004469 - symbol:rps-0 species:6239 "Caenorhabd... 666 2.0e-65 1
UNIPROTKB|P46769 - symbol:rps-0 "40S ribosomal protein SA... 666 2.0e-65 1
UNIPROTKB|Q3YAI0 - symbol:LAMR1 "Ribosomal protein SA" sp... 664 3.2e-65 1
TAIR|locus:2193997 - symbol:P40 "AT1G72370" species:3702 ... 652 6.0e-64 1
UNIPROTKB|Q8H3I3 - symbol:B1056G08.113 "Os07g0616600 prot... 646 2.6e-63 1
TAIR|locus:2084988 - symbol:RPSAb "AT3G04770" species:370... 630 1.3e-61 1
ASPGD|ASPL0000040942 - symbol:AN3172 species:162425 "Emer... 623 7.1e-61 1
UNIPROTKB|Q5B8F8 - symbol:rps0 "40S ribosomal protein S0"... 623 7.1e-61 1
POMBASE|SPAPJ698.02c - symbol:rps002 "40S ribosomal prote... 618 2.4e-60 1
UNIPROTKB|A8IB25 - symbol:CHLREDRAFT_126059 "40S ribosoma... 616 3.9e-60 1
POMBASE|SPBC685.06 - symbol:rps001 "40S ribosomal protein... 609 2.2e-59 1
UNIPROTKB|Q01291 - symbol:rps-0 "40S ribosomal protein S0... 607 3.5e-59 1
DICTYBASE|DDB_G0270316 - symbol:rpsA "40S ribosomal prote... 602 1.2e-58 1
SGD|S000003446 - symbol:RPS0A "Ribosomal 40S subunit prot... 595 6.6e-58 1
GENEDB_PFALCIPARUM|PF10_0264 - symbol:PF10_0264 "40S ribo... 594 8.4e-58 1
UNIPROTKB|Q8IJD4 - symbol:PF10_0264 "40S ribosomal protei... 594 8.4e-58 1
SGD|S000004038 - symbol:RPS0B "Protein component of the s... 592 1.4e-57 1
UNIPROTKB|Q7RBT0 - symbol:PY06059 "40S ribosomal protein ... 589 2.8e-57 1
CGD|CAL0000370 - symbol:YST1 species:5476 "Candida albica... 586 5.9e-57 1
UNIPROTKB|O42817 - symbol:RPS0 "40S ribosomal protein S0"... 586 5.9e-57 1
UNIPROTKB|Q75CQ9 - symbol:RPS0 "40S ribosomal protein S0"... 568 4.8e-55 1
UNIPROTKB|F1M8B9 - symbol:F1M8B9 "Uncharacterized protein... 490 8.8e-47 1
UNIPROTKB|F1SJR1 - symbol:F1SJR1 "Uncharacterized protein... 480 1.0e-45 1
UNIPROTKB|F1S1E3 - symbol:F1S1E3 "Uncharacterized protein... 464 5.0e-44 1
UNIPROTKB|J9P9K4 - symbol:J9P9K4 "Uncharacterized protein... 407 5.5e-38 1
UNIPROTKB|I3LIK7 - symbol:I3LIK7 "Uncharacterized protein... 395 1.0e-36 1
UNIPROTKB|P95993 - symbol:rps2 "30S ribosomal protein S2"... 393 1.7e-36 1
RGD|1560987 - symbol:RGD1560987 "similar to 40S ribosomal... 384 1.5e-35 1
UNIPROTKB|I3L6M5 - symbol:I3L6M5 "Uncharacterized protein... 351 4.7e-32 1
UNIPROTKB|D4A495 - symbol:D4A495 "Uncharacterized protein... 350 6.0e-32 1
UNIPROTKB|F1NKH1 - symbol:RPSA "40S ribosomal protein SA"... 331 6.2e-30 1
UNIPROTKB|E2RGM2 - symbol:E2RGM2 "Uncharacterized protein... 327 1.6e-29 1
UNIPROTKB|Q8TT39 - symbol:rps2 "30S ribosomal protein S2"... 327 1.6e-29 1
UNIPROTKB|F1LT21 - symbol:F1LT21 "Uncharacterized protein... 309 1.3e-27 1
UNIPROTKB|C9JQR9 - symbol:RPSAP58 "Protein RPSAP58" speci... 278 2.6e-24 1
SGD|S000000996 - symbol:MRP4 "Mitochondrial ribosomal pro... 96 1.2e-07 2
TIGR_CMR|BA_3965 - symbol:BA_3965 "ribosomal protein S2" ... 95 4.6e-07 2
TIGR_CMR|DET_0377 - symbol:DET_0377 "ribosomal protein S2... 96 5.2e-07 2
TIGR_CMR|APH_0397 - symbol:APH_0397 "ribosomal protein S2... 95 4.7e-06 2
TIGR_CMR|ECH_0514 - symbol:ECH_0514 "ribosomal protein S2... 91 3.3e-05 2
POMBASE|SPAC24C9.10c - symbol:mrp4 "mitochondrial ribosom... 79 6.3e-05 2
UNIPROTKB|P66537 - symbol:rpsB "30S ribosomal protein S2"... 80 6.4e-05 2
TIGR_CMR|SPO_1976 - symbol:SPO_1976 "ribosomal protein S2... 79 7.4e-05 2
UNIPROTKB|G4NGF2 - symbol:MGG_04331 "37S ribosomal protei... 92 0.00014 2
TAIR|locus:2096394 - symbol:RPS2 "ribosomal protein S2" s... 83 0.00059 2
TIGR_CMR|NSE_0948 - symbol:NSE_0948 "ribosomal protein S2... 82 0.00087 2
UNIPROTKB|Q9KPV2 - symbol:rpsB "30S ribosomal protein S2"... 74 0.00098 2
TIGR_CMR|VC_2260 - symbol:VC_2260 "ribosomal protein S2" ... 74 0.00098 2
>FB|FBgn0003517 [details] [associations]
symbol:sta "stubarista" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IBA;IDA;NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IBA;NAS] [GO:0006412 "translation"
evidence=ISS;IBA;NAS] [GO:0043022 "ribosome binding" evidence=IPI]
[GO:0005840 "ribosome" evidence=NAS;IDA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0006407 "rRNA export from nucleus" evidence=IBA]
[GO:0000028 "ribosomal small subunit assembly" evidence=IBA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA] [GO:0030686 "90S
preribosome" evidence=IBA] [GO:0000461 "endonucleolytic cleavage to
generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IBA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0007275 GO:GO:0005634 GO:GO:0005875
GO:GO:0005811 GO:GO:0006412 EMBL:AE014298 GO:GO:0043022
GO:GO:0003735 GO:GO:0000022 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 ChiTaRS:EMD GO:GO:0006407 EMBL:AL031027
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 GeneTree:ENSGT00390000015036 EMBL:M90422
EMBL:AY118899 EMBL:BT029094 EMBL:M77133 PIR:T13602
RefSeq:NP_476750.1 RefSeq:NP_726744.1 RefSeq:NP_726745.2
UniGene:Dm.33985 UniGene:Dm.4723 ProteinModelPortal:P38979
SMR:P38979 DIP:DIP-17178N IntAct:P38979 MINT:MINT-1635735
STRING:P38979 PaxDb:P38979 PRIDE:P38979 EnsemblMetazoa:FBtr0070291
GeneID:31106 KEGG:dme:Dmel_CG14792 CTD:104044 FlyBase:FBgn0003517
InParanoid:P38979 OrthoDB:EOG4ZCRMJ PhylomeDB:P38979
GenomeRNAi:31106 NextBio:771969 Bgee:P38979 GermOnline:CG14792
Uniprot:P38979
Length = 313
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 159/189 (84%), Positives = 174/189 (92%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGGLDILSLKEDD+TKML A TH+GSEN ++QMEQYVYKRR DGV+ILNL +TWEKL L
Sbjct: 44 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 103
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAI++P+D+FVISSRPIGQRAVLKFA YT TPIAGRFTPGAFTNQIQ AFREPR
Sbjct: 104 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPR 163
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP+TDHQPI EA+YVNIPVIAF NT+SPLR++DIAIPCNNKS HSIGLMWWLLAR
Sbjct: 164 LLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAR 223
Query: 181 EVLRFRGVI 189
EVLR RG I
Sbjct: 224 EVLRLRGTI 232
>UNIPROTKB|P50890 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9031 "Gallus
gallus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IBA] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0043236 "laminin binding" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0043236
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 EMBL:X94368 IPI:IPI00590239
RefSeq:NP_001007824.1 UniGene:Gga.34355 ProteinModelPortal:P50890
SMR:P50890 IntAct:P50890 STRING:P50890 PRIDE:P50890
Ensembl:ENSGALT00000019495 GeneID:395181 KEGG:gga:395181
InParanoid:P50890 NextBio:20815271 ArrayExpress:P50890
Uniprot:P50890
Length = 296
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 148/193 (76%), Positives = 170/193 (88%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGGLD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVNIP IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|Q6P8D1 [details] [associations]
symbol:rpsa "40S ribosomal protein SA" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000028 "ribosomal small
subunit assembly" evidence=ISS] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015
GeneTree:ENSGT00390000015036 HSSP:O29132 CTD:3921 OrthoDB:EOG40ZQZ6
HAMAP:MF_03016 EMBL:CR942700 EMBL:BC061298 EMBL:BC168799
RefSeq:NP_989068.1 UniGene:Str.6703 ProteinModelPortal:Q6P8D1
SMR:Q6P8D1 STRING:Q6P8D1 PRIDE:Q6P8D1 Ensembl:ENSXETT00000057070
GeneID:394665 KEGG:xtr:394665 Xenbase:XB-GENE-972235
InParanoid:Q6P8D1 OMA:XIEKEEQ Bgee:Q6P8D1 Uniprot:Q6P8D1
Length = 306
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 148/193 (76%), Positives = 170/193 (88%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGGLD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFAS +GATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVNIP IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>RGD|71026 [details] [associations]
symbol:Rpsa "ribosomal protein SA" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0005055 "laminin receptor activity" evidence=TAS] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0005604 "basement
membrane" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO;ISS]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030686 "90S preribosome"
evidence=IBA] [GO:0030855 "epithelial cell differentiation"
evidence=IEP] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0043022 "ribosome binding" evidence=ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0043236 "laminin binding" evidence=ISO]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
RGD:71026 GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0043025
GO:GO:0003735 GO:GO:0016337 GO:GO:0005604 GO:GO:0000028
GO:GO:0030855 GO:GO:0005055 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 EMBL:D25224 EMBL:FJ386454
EMBL:BC060578 EMBL:U04942 EMBL:M27798 IPI:IPI00215107 PIR:S42405
RefSeq:NP_058834.1 UniGene:Rn.121972 UniGene:Rn.161973
UniGene:Rn.999 ProteinModelPortal:P38983 SMR:P38983 IntAct:P38983
MINT:MINT-4568881 STRING:P38983 PhosphoSite:P38983 PRIDE:P38983
DNASU:29236 Ensembl:ENSRNOT00000025225 GeneID:29236 KEGG:rno:29236
UCSC:RGD:71026 InParanoid:P38983 NextBio:608498
Genevestigator:P38983 GermOnline:ENSRNOG00000018645 Uniprot:P38983
Length = 295
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 147/193 (76%), Positives = 170/193 (88%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGGLD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>ZFIN|ZDB-GENE-040426-811 [details] [associations]
symbol:rpsa "ribosomal protein SA" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IBA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IBA] [GO:0000028 "ribosomal small subunit
assembly" evidence=IBA] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 ZFIN:ZDB-GENE-040426-811 GO:GO:0005886
GO:GO:0005634 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
OMA:ENVNFQM HAMAP:MF_03015 GeneTree:ENSGT00390000015036 HSSP:O29132
CTD:3921 HAMAP:MF_03016 EMBL:AY391434 EMBL:BC044504 EMBL:BC062859
IPI:IPI00508284 RefSeq:NP_957346.1 UniGene:Dr.75127
ProteinModelPortal:Q803F6 SMR:Q803F6 STRING:Q803F6 PRIDE:Q803F6
Ensembl:ENSDART00000135945 GeneID:394027 KEGG:dre:394027
InParanoid:Q803F6 NextBio:20814990 ArrayExpress:Q803F6 Bgee:Q803F6
Uniprot:Q803F6
Length = 308
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 147/193 (76%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGGLD+L +KE+DV K L A TH+G N D+QMEQYVYKR++DGV+I+NL++TWEKLLL
Sbjct: 1 MSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGVYIINLKKTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFAS TG+T AGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVCVISSRNTGQRAVLKFASATGSTTFAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LL+VTDP DHQP+TEA+YVNIP IA CNT+SPLR+VDIAIPCNNK PHS+GLMWW+LAR
Sbjct: 121 LLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|P26452 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043236 "laminin binding" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006407 "rRNA export from nucleus" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0000461
"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=ISS] [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0043236
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 EMBL:M64923 EMBL:BC102490
IPI:IPI00709865 PIR:A38464 RefSeq:NP_776804.1 UniGene:Bt.49711
ProteinModelPortal:P26452 SMR:P26452 STRING:P26452 PRIDE:P26452
Ensembl:ENSBTAT00000012866 GeneID:281898 KEGG:bta:281898 CTD:3921
HOVERGEN:HBG054466 InParanoid:P26452 OrthoDB:EOG40ZQZ6
NextBio:20805794 ArrayExpress:P26452 HAMAP:MF_03016 Uniprot:P26452
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|E2RJ06 [details] [associations]
symbol:RPSA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012 OMA:ENVNFQM
GeneTree:ENSGT00390000015036 EMBL:AAEX03013498 UniGene:Cfa.27618
Ensembl:ENSCAFT00000008199 NextBio:20852580 Uniprot:E2RJ06
Length = 314
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|J9JHJ2 [details] [associations]
symbol:RPSA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998
GeneTree:ENSGT00390000015036 CTD:3921 EMBL:AAEX03013498
RefSeq:NP_001239159.1 ProteinModelPortal:J9JHJ2
Ensembl:ENSCAFT00000048108 GeneID:477029 KEGG:cfa:477029
Uniprot:J9JHJ2
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|C9J9K3 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 HGNC:HGNC:6502 ChiTaRS:RPSA
EMBL:AC099332 IPI:IPI00927101 ProteinModelPortal:C9J9K3 SMR:C9J9K3
STRING:C9J9K3 PRIDE:C9J9K3 Ensembl:ENST00000458478
ArrayExpress:C9J9K3 Bgee:C9J9K3 Uniprot:C9J9K3
Length = 264
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|P08865 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9606 "Homo
sapiens" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0030686
"90S preribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0043022 "ribosome
binding" evidence=IPI] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0007155 GO:GO:0043022 GO:GO:0003735
GO:GO:0000028 GO:GO:0030686 GO:GO:0000447 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
KO:K02998 HAMAP:MF_03015 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 EMBL:J03799 EMBL:X15005
EMBL:S37431 EMBL:U43901 EMBL:AF503367 EMBL:BT007219 EMBL:BC005391
EMBL:BC008867 EMBL:BC010418 EMBL:BC013827 EMBL:BC034537
EMBL:BC050688 EMBL:BC053370 EMBL:BC062714 EMBL:BC066941
EMBL:BC068062 EMBL:BC070263 EMBL:BC071693 EMBL:BC071968
EMBL:BC071969 EMBL:BC071970 EMBL:BC073863 EMBL:BC107567 EMBL:X61156
EMBL:U36484 EMBL:M14199 EMBL:AB007146 IPI:IPI00553164 PIR:A31233
RefSeq:NP_001012321.1 RefSeq:NP_002286.2 UniGene:Hs.449909 PDB:3BCH
PDBsum:3BCH ProteinModelPortal:P08865 SMR:P08865 IntAct:P08865
MINT:MINT-1402850 STRING:P08865 PhosphoSite:P08865 DMDM:125969
PaxDb:P08865 PRIDE:P08865 DNASU:3921 Ensembl:ENST00000301821
Ensembl:ENST00000443003 GeneID:3921 KEGG:hsa:3921 UCSC:uc003cjp.3
GeneCards:GC03P039448 HGNC:HGNC:6502 HPA:CAB009561 MIM:150370
neXtProt:NX_P08865 PharmGKB:PA30287 InParanoid:P08865
PhylomeDB:P08865 ChEMBL:CHEMBL6119 ChiTaRS:RPSA
EvolutionaryTrace:P08865 GenomeRNAi:3921 NextBio:15405
ArrayExpress:P08865 Bgee:P08865 Genevestigator:P08865
GermOnline:ENSG00000168028 Uniprot:P08865
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|Q4GWZ2 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
HAMAP:MF_03015 CTD:3921 HOVERGEN:HBG054466 OrthoDB:EOG40ZQZ6
HAMAP:MF_03016 EMBL:AM050292 RefSeq:NP_001032223.1
UniGene:Ssc.11095 ProteinModelPortal:Q4GWZ2 SMR:Q4GWZ2
STRING:Q4GWZ2 GeneID:641351 KEGG:ssc:641351 ArrayExpress:Q4GWZ2
Uniprot:Q4GWZ2
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|A6YRY8 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9940 "Ovis
aries" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HAMAP:MF_03015
HOVERGEN:HBG054466 HAMAP:MF_03016 EMBL:EF649775 EMBL:EF222474
RefSeq:NP_001098733.1 UniGene:Oar.22928 ProteinModelPortal:A6YRY8
SMR:A6YRY8 GeneID:100125628 Uniprot:A6YRY8
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|Q2L9X0 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9534
"Chlorocebus aethiops" [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HAMAP:MF_03015 HOVERGEN:HBG054466 HAMAP:MF_03016
EMBL:DQ343296 ProteinModelPortal:Q2L9X0 SMR:Q2L9X0 PRIDE:Q2L9X0
Uniprot:Q2L9X0
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>MGI|MGI:105381 [details] [associations]
symbol:Rpsa "ribosomal protein SA" species:10090 "Mus
musculus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0005604 "basement membrane" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006407 "rRNA export from
nucleus" evidence=IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IDA] [GO:0016020
"membrane" evidence=ISO] [GO:0016337 "cell-cell adhesion"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IBA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0043022
"ribosome binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043236 "laminin binding" evidence=IDA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
MGI:MGI:105381 GO:GO:0005886 GO:GO:0005634 GO:GO:0006412
GO:GO:0043236 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 EMBL:DQ360291 EMBL:DQ360292
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 ChiTaRS:RPSA EMBL:J02870
EMBL:X06406 EMBL:AF140348 EMBL:AK010423 EMBL:AK010985 EMBL:AK011041
EMBL:AK011043 EMBL:AK075778 EMBL:AK075790 EMBL:AK082935
EMBL:AK088954 EMBL:AK134224 EMBL:AK135488 EMBL:AK160551
EMBL:AK160625 EMBL:AK165219 EMBL:AK166697 EMBL:AK166874
EMBL:AK167132 EMBL:BC003829 EMBL:BC037195 EMBL:BC055886
EMBL:BC081461 EMBL:BC084677 EMBL:BC092041 EMBL:BC094902
EMBL:BC099601 EMBL:BC110285 IPI:IPI00123604 PIR:A29395
RefSeq:NP_035159.3 RefSeq:XP_003086186.1 UniGene:Mm.311972
UniGene:Mm.391708 UniGene:Mm.4071 ProteinModelPortal:P14206
SMR:P14206 IntAct:P14206 STRING:P14206 PhosphoSite:P14206
REPRODUCTION-2DPAGE:IPI00123604 REPRODUCTION-2DPAGE:P14206
SWISS-2DPAGE:P14206 PaxDb:P14206 PRIDE:P14206
Ensembl:ENSMUST00000035105 GeneID:100505031 GeneID:16785
KEGG:mmu:100505031 KEGG:mmu:16785 UCSC:uc009scd.2 InParanoid:P14206
ChEMBL:CHEMBL1075301 NextBio:290650 Bgee:P14206 CleanEx:MM_RPSA
Genevestigator:P14206 GermOnline:ENSMUSG00000032518 Uniprot:P14206
Length = 295
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/193 (75%), Positives = 169/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>UNIPROTKB|P38982 [details] [associations]
symbol:Rpsa "40S ribosomal protein SA" species:10029
"Cricetulus griseus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HAMAP:MF_03015 CTD:3921 HOVERGEN:HBG054466
HAMAP:MF_03016 EMBL:L16589 EMBL:Z22749 PIR:S33438
RefSeq:NP_001230962.1 ProteinModelPortal:P38982 SMR:P38982
PRIDE:P38982 GeneID:100689045 Uniprot:P38982
Length = 295
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 145/193 (75%), Positives = 168/193 (87%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QMEQY+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EV R RG I ++
Sbjct: 181 EVRRMRGTISREH 193
>UNIPROTKB|A6NE09 [details] [associations]
symbol:RPSAP58 "Protein RPSAP58" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 OMA:ENVNFQM
HOVERGEN:HBG054466 EMBL:AC139769 IPI:IPI00793137 SMR:A6NE09
STRING:A6NE09 Ensembl:ENST00000354585 Ensembl:ENST00000496398
UCSC:uc002nrn.3 HGNC:HGNC:36809 Uniprot:A6NE09
Length = 295
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 144/193 (74%), Positives = 167/193 (86%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QME Y+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEHYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+PADV VISSR GQRAVLKFA+ TGATPIAGRFTPG FTNQIQAAF EPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFWEPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 181 EVLRFRGVIGPDY 193
EVLR RG I ++
Sbjct: 181 EVLRMRGTISREH 193
>ZFIN|ZDB-GENE-050417-382 [details] [associations]
symbol:zgc:110181 "zgc:110181" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 ZFIN:ZDB-GENE-050417-382
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOVERGEN:HBG054466 EMBL:BC092777 IPI:IPI00570173
RefSeq:NP_001017838.1 UniGene:Dr.87993 ProteinModelPortal:Q568P4
SMR:Q568P4 GeneID:550536 KEGG:dre:550536 NextBio:20879777
Uniprot:Q568P4
Length = 295
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 142/192 (73%), Positives = 164/192 (85%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG L +L E D+ KML A+THIGSENSD+QM QYVYKR DGVHI+NL++TWEKL+L
Sbjct: 1 MSGAL---ALTEPDILKMLAAKTHIGSENSDFQMLQYVYKRCIDGVHIINLKKTWEKLVL 57
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAIVAIE+P++VF IS+R GQRAVLK++ YTGATPIAGRFTPGAFTNQIQAAFREPR
Sbjct: 58 AARAIVAIENPSEVFAISTRQQGQRAVLKYSKYTGATPIAGRFTPGAFTNQIQAAFREPR 117
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVV DP DHQ I EA+YVNIPVIAFC+ +SPLR+VDIAIPCN K+PHS+GLM+W L R
Sbjct: 118 LLVVADPLADHQSIVEASYVNIPVIAFCDVDSPLRYVDIAIPCNTKAPHSLGLMFWFLTR 177
Query: 181 EVLRFRGVIGPD 192
EVLR R +I D
Sbjct: 178 EVLRLRAMISRD 189
>UNIPROTKB|I3LC48 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 GeneTree:ENSGT00390000015036 EMBL:CU928418
EMBL:FP312619 Ensembl:ENSSSCT00000004148 Uniprot:I3LC48
Length = 293
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 134/188 (71%), Positives = 159/188 (84%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MS LD+L +KE+DV K L A TH+G N D+Q EQY+YKR++DG++++NL+RTWEKLLL
Sbjct: 1 MSRALDVLQMKEEDVLKFLAAGTHLGGTNLDFQREQYIYKRKSDGIYVINLQRTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
ARA+VAIE+PADV VISSR GQRAVL FA+ TGATPIAG FTPG FTNQIQAAFREPR
Sbjct: 61 VARAVVAIENPADVSVISSRNTGQRAVLCFAAATGATPIAGLFTPGTFTNQIQAAFREPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+VDIAIPCN K S+GLMWW+L +
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPAIALCNTDSPLRYVDIAIPCNKKGALSVGLMWWMLTQ 180
Query: 181 EVLRFRGV 188
EVLR RG+
Sbjct: 181 EVLRMRGI 188
>WB|WBGene00004469 [details] [associations]
symbol:rps-0 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0040035 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015
GeneTree:ENSGT00390000015036 EMBL:Z37983 PIR:T18742
RefSeq:NP_497978.1 ProteinModelPortal:P46769 SMR:P46769
DIP:DIP-26217N IntAct:P46769 MINT:MINT-1037948 STRING:P46769
World-2DPAGE:0020:P46769 PaxDb:P46769 EnsemblMetazoa:B0393.1.1
EnsemblMetazoa:B0393.1.2 GeneID:175628 KEGG:cel:CELE_B0393.1
UCSC:B0393.1.1 CTD:175628 WormBase:B0393.1 InParanoid:P46769
OMA:QAGADWT NextBio:888964 Uniprot:P46769
Length = 276
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 121/189 (64%), Positives = 153/189 (80%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGG +L E+DV K+L Q H+GS N ++QM+QYVYKRR DG +I+N+++TWEKLLL
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAI A+E+PADV V+S+RP QRA+LKFA++TGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLV++DP DHQ +TEA+YV +PVI+F NTESPL+ +DI +PCNNK SIGLMWW+LAR
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 181 EVLRFRGVI 189
E+L RG I
Sbjct: 181 EILILRGKI 189
>UNIPROTKB|P46769 [details] [associations]
symbol:rps-0 "40S ribosomal protein SA" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0006407 "rRNA export
from nucleus" evidence=IBA] [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0000461 "endonucleolytic cleavage to
generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IBA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IBA] [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0040035 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015
GeneTree:ENSGT00390000015036 EMBL:Z37983 PIR:T18742
RefSeq:NP_497978.1 ProteinModelPortal:P46769 SMR:P46769
DIP:DIP-26217N IntAct:P46769 MINT:MINT-1037948 STRING:P46769
World-2DPAGE:0020:P46769 PaxDb:P46769 EnsemblMetazoa:B0393.1.1
EnsemblMetazoa:B0393.1.2 GeneID:175628 KEGG:cel:CELE_B0393.1
UCSC:B0393.1.1 CTD:175628 WormBase:B0393.1 InParanoid:P46769
OMA:QAGADWT NextBio:888964 Uniprot:P46769
Length = 276
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 121/189 (64%), Positives = 153/189 (80%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSGG +L E+DV K+L Q H+GS N ++QM+QYVYKRR DG +I+N+++TWEKLLL
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
AARAI A+E+PADV V+S+RP QRA+LKFA++TGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
LLV++DP DHQ +TEA+YV +PVI+F NTESPL+ +DI +PCNNK SIGLMWW+LAR
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 181 EVLRFRGVI 189
E+L RG I
Sbjct: 181 EILILRGKI 189
>UNIPROTKB|Q3YAI0 [details] [associations]
symbol:LAMR1 "Ribosomal protein SA" species:9544 "Macaca
mulatta" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISS] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0006407 "rRNA export from nucleus" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0030686 "90S preribosome" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 GO:GO:0006412
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 HOVERGEN:HBG054466 OrthoDB:EOG40ZQZ6
EMBL:DQ148158 UniGene:Mmu.19607 InParanoid:Q3YAI0 Uniprot:Q3YAI0
Length = 167
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 122/156 (78%), Positives = 141/156 (90%)
Query: 38 VYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGAT 97
+YKR++DG++I+NL+RTWEKLLLAARAIVAIE+PADV VISSR GQRAVLKFA+ TGAT
Sbjct: 1 IYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGAT 60
Query: 98 PIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFV 157
PIAGRFTPG FTNQI+AAFREPRLLVVTDP DHQP+TEA+YVN+P IA CNT+SPLR+V
Sbjct: 61 PIAGRFTPGTFTNQIRAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYV 120
Query: 158 DIAIPCNNKSPHSIGLMWWLLAREVLRFRGVIGPDY 193
DIAIPCNNK HS+GLMWW+LAREVLR RG I ++
Sbjct: 121 DIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREH 156
>TAIR|locus:2193997 [details] [associations]
symbol:P40 "AT1G72370" species:3702 "Arabidopsis
thaliana" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IBA]
[GO:0006412 "translation" evidence=IEA;ISS;IBA] [GO:0015935 "small
ribosomal subunit" evidence=IEA;IDA] [GO:0030686 "90S preribosome"
evidence=IBA] [GO:0042256 "mature ribosome assembly" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009651
"response to salt stress" evidence=IEP;RCA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] [GO:0046686 "response to cadmium
ion" evidence=RCA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 EnsemblPlants:AT1G72370.1 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0009507 GO:GO:0006412 GO:GO:0009651 GO:GO:0003735
GO:GO:0000028 EMBL:AC016529 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
EMBL:X69056 EMBL:U01955 EMBL:X89366 EMBL:Y10379 EMBL:AY054211
EMBL:AY058885 EMBL:AY065096 EMBL:AY079041 EMBL:AY114561
EMBL:AY136324 EMBL:BT000421 EMBL:AY087976 IPI:IPI00532111
PIR:F96747 PIR:S71247 RefSeq:NP_177381.1 UniGene:At.22576
UniGene:At.35111 UniGene:At.70162 ProteinModelPortal:Q08682
SMR:Q08682 IntAct:Q08682 STRING:Q08682 PaxDb:Q08682 PRIDE:Q08682
ProMEX:Q08682 GeneID:843569 KEGG:ath:AT1G72370 GeneFarm:5044
TAIR:At1g72370 HOGENOM:HOG000232073 InParanoid:Q08682 KO:K02998
OMA:ENVNFQM PhylomeDB:Q08682 ProtClustDB:CLSN2912707
Genevestigator:Q08682 HAMAP:MF_03015 Uniprot:Q08682
Length = 298
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 121/182 (66%), Positives = 146/182 (80%)
Query: 8 LSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVA 67
LS KE DV M A+ H+G++N +YQME+YV+KRRNDG++I NL +TWEKL +AAR IVA
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 68 IEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDP 127
IE+P D+ V S+RP GQRAVLKFA YTGA IAGR TPG FTNQ+Q +F EPRLL++TDP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDP 131
Query: 128 HTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRG 187
TDHQPI E A NIP+IAFC+T+SP+RFVDI IP NNK HSIG ++WLLAR VL+ RG
Sbjct: 132 RTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
Query: 188 VI 189
I
Sbjct: 192 TI 193
>UNIPROTKB|Q8H3I3 [details] [associations]
symbol:B1056G08.113 "Os07g0616600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0009507 GO:GO:0006412
GO:GO:0009651 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
EMBL:AP008213 EMBL:CM000144 GO:GO:0000447 GO:GO:0042256
GO:GO:0022627 EMBL:AP004988 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 KO:K02998 HSSP:O29132 OMA:QAGADWT PDB:3IZ6
PDBsum:3IZ6 EMBL:AK058308 EMBL:AK102735 EMBL:AK103952 EMBL:AK105968
RefSeq:NP_001060277.1 UniGene:Os.8273 STRING:Q8H3I3
EnsemblPlants:LOC_Os07g42450.1 GeneID:4343909 KEGG:osa:4343909
ProtClustDB:CLSN2919813 Uniprot:Q8H3I3
Length = 305
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 120/186 (64%), Positives = 147/186 (79%)
Query: 8 LSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVA 67
LS +E D+ ML A H+G++N D+QME+YVYKRR DG++I+NL +TWEKL LAAR IVA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 68 IEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDP 127
IE+P D+ V S+RP GQRAVLKFA YTGA IAGR TPG FTNQ+Q +F EPRLL++TDP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 128 HTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRG 187
TDHQPI E+A NIP IAFC+T+SP+R+VDI IP NNK SIG ++WLLAR VL+ RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191
Query: 188 VIGPDY 193
I P +
Sbjct: 192 TILPGH 197
>TAIR|locus:2084988 [details] [associations]
symbol:RPSAb "AT3G04770" species:3702 "Arabidopsis
thaliana" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS;IBA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0006412
"translation" evidence=IEA;ISS;IBA] [GO:0030686 "90S preribosome"
evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963
EnsemblPlants:AT3G04770.1 GO:GO:0009507 EMBL:CP002686 GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
KO:K02998 IPI:IPI00522617 RefSeq:NP_850515.1 UniGene:At.10372
ProteinModelPortal:F4J4W3 SMR:F4J4W3 PRIDE:F4J4W3 DNASU:819637
GeneID:819637 KEGG:ath:AT3G04770 OMA:RWICFST Uniprot:F4J4W3
Length = 332
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 116/182 (63%), Positives = 144/182 (79%)
Query: 8 LSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVA 67
+S KE D+ ML A H+G++N +YQME+YV+KRR+DG++I+NL +TW+KL +AAR IVA
Sbjct: 13 VSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVA 72
Query: 68 IEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDP 127
IE+P D+ V S+RP GQRAVLKFA YTG IAGR TPG FTNQ+Q +F EPRLL++TDP
Sbjct: 73 IENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDP 132
Query: 128 HTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRG 187
TDHQPI E A NIP IAFC+T+SP+ FVDI IP NNK HSIG ++WLLAR VL+ RG
Sbjct: 133 RTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 192
Query: 188 VI 189
I
Sbjct: 193 TI 194
>ASPGD|ASPL0000040942 [details] [associations]
symbol:AN3172 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0000028 "ribosomal small subunit assembly"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=IEA] [GO:0000461
"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 OrthoDB:EOG4KH646 HSSP:O29132 RefSeq:XP_660776.1
STRING:Q5B8F8 PRIDE:Q5B8F8 EnsemblFungi:CADANIAT00009898
GeneID:2874532 KEGG:ani:AN3172.2 Uniprot:Q5B8F8
Length = 293
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 116/176 (65%), Positives = 143/176 (81%)
Query: 14 DVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPAD 73
D+ +L AQ H+GS+N ME Y++K R DGV+++N+ +TWEK+LLAAR I AI++PAD
Sbjct: 16 DIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINVGKTWEKILLAARIIAAIDNPAD 75
Query: 74 VFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQP 133
+ VIS+RP GQRAVLKFAS+TGAT IAGRFTPG FTN I +F+EPRL+VVTDP TD Q
Sbjct: 76 ICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIVVTDPRTDAQA 135
Query: 134 ITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
I EA+YVNIPVIA C+T+SP FVD+AIP NNK H+IGL+WWLLAREVLR RG +
Sbjct: 136 IKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLAREVLRLRGTL 191
>UNIPROTKB|Q5B8F8 [details] [associations]
symbol:rps0 "40S ribosomal protein S0" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
OrthoDB:EOG4KH646 HSSP:O29132 RefSeq:XP_660776.1 STRING:Q5B8F8
PRIDE:Q5B8F8 EnsemblFungi:CADANIAT00009898 GeneID:2874532
KEGG:ani:AN3172.2 Uniprot:Q5B8F8
Length = 293
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 116/176 (65%), Positives = 143/176 (81%)
Query: 14 DVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPAD 73
D+ +L AQ H+GS+N ME Y++K R DGV+++N+ +TWEK+LLAAR I AI++PAD
Sbjct: 16 DIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINVGKTWEKILLAARIIAAIDNPAD 75
Query: 74 VFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQP 133
+ VIS+RP GQRAVLKFAS+TGAT IAGRFTPG FTN I +F+EPRL+VVTDP TD Q
Sbjct: 76 ICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIVVTDPRTDAQA 135
Query: 134 ITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
I EA+YVNIPVIA C+T+SP FVD+AIP NNK H+IGL+WWLLAREVLR RG +
Sbjct: 136 IKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLAREVLRLRGTL 191
>POMBASE|SPAPJ698.02c [details] [associations]
symbol:rps002 "40S ribosomal protein S0B" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006412 "translation" evidence=IC] [GO:0022627
"cytosolic small ribosomal subunit" evidence=TAS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IMP]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
PomBase:SPAPJ698.02c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0006364 GO:GO:0042274
GO:GO:0022627 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
OMA:ENVNFQM HAMAP:MF_03015 OrthoDB:EOG4KH646 RefSeq:NP_594413.1
ProteinModelPortal:Q9P546 SMR:Q9P546 STRING:Q9P546 PRIDE:Q9P546
EnsemblFungi:SPAPJ698.02c.1 GeneID:2543293 KEGG:spo:SPAPJ698.02c
NextBio:20804311 Uniprot:Q9P546
Length = 287
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/183 (64%), Positives = 145/183 (79%)
Query: 7 ILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIV 66
+L+ +DD+ +L A +HIGS+N + +ME YV+KRR+DG+HI+NL +TWEKL+LAAR I
Sbjct: 10 VLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIA 69
Query: 67 AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTD 126
IE+PADV VISSRP G RAVLKFA++TGAT IAGRFTPG FTN I +REPRL++VTD
Sbjct: 70 TIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTD 129
Query: 127 PHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFR 186
P D Q I EA++VNIPVIA C+T+S L VD+AIP NNK SIGL W+LLAREVLR R
Sbjct: 130 PRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLR 189
Query: 187 GVI 189
G I
Sbjct: 190 GNI 192
>UNIPROTKB|A8IB25 [details] [associations]
symbol:CHLREDRAFT_126059 "40S ribosomal protein SA"
species:3055 "Chlamydomonas reinhardtii" [GO:0000028 "ribosomal
small subunit assembly" evidence=ISS] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634 GO:GO:0009507
GO:GO:0006412 GO:GO:0009651 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0042256 GO:GO:0022627
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 EMBL:DS496115 RefSeq:XP_001702485.1 UniGene:Cre.2557
ProteinModelPortal:A8IB25 SMR:A8IB25 STRING:A8IB25 PRIDE:A8IB25
EnsemblPlants:EDP06264 GeneID:5728044 KEGG:cre:CHLREDRAFT_126059
eggNOG:NOG251336 ProtClustDB:CLSN2923915 Uniprot:A8IB25
Length = 279
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 113/182 (62%), Positives = 144/182 (79%)
Query: 8 LSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVA 67
LS KE D+ ML AQ H+G++N YQME+Y+Y+RR DG++I+NL +T+EKL +AAR IVA
Sbjct: 3 LSQKEQDIQMMLAAQCHLGTKNCHYQMERYMYRRRQDGIYIINLEKTYEKLQMAARIIVA 62
Query: 68 IEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDP 127
IE+P D+ V+S+RP GQRAV KFA Y G +AGR TPG FTNQIQ AF EPRLL++TDP
Sbjct: 63 IENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQIQKAFEEPRLLILTDP 122
Query: 128 HTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRG 187
TDHQP+ E++Y+NIP IAFC+T+SPL VD+AIP NNK HSIG++++LLAR VL R
Sbjct: 123 RTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRD 182
Query: 188 VI 189
I
Sbjct: 183 QI 184
>POMBASE|SPBC685.06 [details] [associations]
symbol:rps001 "40S ribosomal protein S0A (p40)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006412 "translation" evidence=IC] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=TAS] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IMP] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 PomBase:SPBC685.06 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0006364 GO:GO:0042274 GO:GO:0022627 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015 PIR:T40637
RefSeq:NP_596140.1 ProteinModelPortal:Q9Y7L8 SMR:Q9Y7L8
STRING:Q9Y7L8 PRIDE:Q9Y7L8 EnsemblFungi:SPBC685.06.1 GeneID:2541144
KEGG:spo:SPBC685.06 OMA:ANCHIGS OrthoDB:EOG4KH646 NextBio:20802257
Uniprot:Q9Y7L8
Length = 292
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 118/187 (63%), Positives = 147/187 (78%)
Query: 3 GGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAA 62
G +IL+ ++D+ ++L A HIGS+N + +M+ YV+KRR+DGVHILNL +TWEKL+LAA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 63 RAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLL 122
R I IE+PADV V+S+R G RAVLKFA++TGAT IAGRFTPG FTN I +REPRL+
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLI 124
Query: 123 VVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREV 182
VVTDP D Q I EA++VNIPVIA C+T+S L VDIAIP NNK SIGL+W+LLAREV
Sbjct: 125 VVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREV 184
Query: 183 LRFRGVI 189
LR RG +
Sbjct: 185 LRVRGTL 191
>UNIPROTKB|Q01291 [details] [associations]
symbol:rps-0 "40S ribosomal protein S0" species:367110
"Neurospora crassa OR74A" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
EMBL:AABX02000008 GO:GO:0030686 GO:GO:0000447 GO:GO:0022627
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
OrthoDB:EOG4KH646 EMBL:U36470 EMBL:AL669992 PIR:T47199
RefSeq:XP_956840.1 UniGene:Ncr.17013 ProteinModelPortal:Q01291
SMR:Q01291 STRING:Q01291 PRIDE:Q01291
EnsemblFungi:EFNCRT00000002664 GeneID:3872987 KEGG:ncr:NCU03393
Uniprot:Q01291
Length = 290
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 112/183 (61%), Positives = 144/183 (78%)
Query: 7 ILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIV 66
I + D+ ++L AQ HIGS+N M+ Y++K R DGV+ILN+ +TWEK++LAAR I
Sbjct: 9 IFNATSTDIEQLLAAQCHIGSKNLGVHMQPYLWKTRADGVNILNVGKTWEKIVLAARIIA 68
Query: 67 AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTD 126
AI++PAD+ VIS+RP GQRAVLKFA++TGA IAGRFTPG+FTN I +F+EPRL++VTD
Sbjct: 69 AIDNPADICVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTD 128
Query: 127 PHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFR 186
P TD Q I EA+YVNIPVIA C+ +SP +VD+AIP NNK H+IG +WW+LAREVLR R
Sbjct: 129 PRTDAQAIKEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLRLR 188
Query: 187 GVI 189
G I
Sbjct: 189 GTI 191
>DICTYBASE|DDB_G0270316 [details] [associations]
symbol:rpsA "40S ribosomal protein SA" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IBA] [GO:0030686
"90S preribosome" evidence=IBA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IBA] [GO:0006407 "rRNA export from
nucleus" evidence=IBA] [GO:0000461 "endonucleolytic cleavage to
generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IBA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IBA] [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 dictyBase:DDB_G0270316
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 HAMAP:MF_03015
OMA:FKEPRVI HSSP:O29132 RefSeq:XP_646700.1
ProteinModelPortal:Q55BY1 SMR:Q55BY1 STRING:Q55BY1
EnsemblProtists:DDB0230016 GeneID:8617674 KEGG:ddi:DDB_G0270316
ProtClustDB:PTZ00254 Uniprot:Q55BY1
Length = 245
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 114/182 (62%), Positives = 142/182 (78%)
Query: 8 LSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVA 67
L+ +DD+ KML QTH+G N D +ME Y +KR+++G I+NL +TWEK+ LAAR IVA
Sbjct: 8 LNPHQDDILKMLACQTHLGGNNVDVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIVA 67
Query: 68 IEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDP 127
IE+PAD+ VIS++P+GQRAVLKFA++ GAT +GRFTPG FTNQIQ+ F EPRLL+V DP
Sbjct: 68 IENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQIQSKFTEPRLLIVADP 127
Query: 128 HTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRG 187
D QP+ EA+YVNIP IA C+T S L VDIAIPCNN+ +SI LM+WLLAREVL RG
Sbjct: 128 LLDKQPLMEASYVNIPTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLYLRG 187
Query: 188 VI 189
I
Sbjct: 188 TI 189
>SGD|S000003446 [details] [associations]
symbol:RPS0A "Ribosomal 40S subunit protein S0A" species:4932
"Saccharomyces cerevisiae" [GO:0006412 "translation" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IDA] [GO:0002181 "cytoplasmic
translation" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=IGI] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000461 "endonucleolytic
cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000028 "ribosomal small subunit
assembly" evidence=IMP] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
SGD:S000003446 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181
GO:GO:0000028 GO:GO:0030686 GO:GO:0000447 PDB:1S1H PDBsum:1S1H
GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G
PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 PDB:1K5X
PDBsum:1K5X GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015 OrthoDB:EOG4KH646
EMBL:M88277 EMBL:Z72999 PIR:S42143 RefSeq:NP_011730.1
ProteinModelPortal:P32905 SMR:P32905 DIP:DIP-5553N IntAct:P32905
MINT:MINT-562708 STRING:P32905 SWISS-2DPAGE:P32905
PeptideAtlas:P32905 EnsemblFungi:YGR214W GeneID:853128
KEGG:sce:YGR214W GeneTree:ENSGT00390000015036 OMA:PYGFKPV
EvolutionaryTrace:P32905 NextBio:973178 Genevestigator:P32905
GermOnline:YGR214W Uniprot:P32905
Length = 252
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 111/180 (61%), Positives = 138/180 (76%)
Query: 10 LKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE 69
L +D +L A TH+G+ N E YV+ R DGVH++N+ +TWEKL+LAAR I AI
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 70 HPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHT 129
+P DV ISSR GQRAVLKFA++TGATPIAGRFTPG+FTN I +F+EPRL++VTDP +
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 130 DHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
D Q I EA+YVNIPVIA + +SP FVD+AIPCNN+ HSIGL+W+LLAREVLR RG +
Sbjct: 129 DAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGAL 188
>GENEDB_PFALCIPARUM|PF10_0264 [details] [associations]
symbol:PF10_0264 "40S ribosomal protein,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:AE014185 GO:GO:0022627
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 HSSP:O29132 ProtClustDB:PTZ00254
RefSeq:XP_001347548.1 ProteinModelPortal:Q8IJD4 SMR:Q8IJD4
IntAct:Q8IJD4 MINT:MINT-1717658 PRIDE:Q8IJD4
EnsemblProtists:PF10_0264:mRNA GeneID:810421 KEGG:pfa:PF10_0264
EuPathDB:PlasmoDB:PF3D7_1026800 Uniprot:Q8IJD4
Length = 263
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 115/181 (63%), Positives = 140/181 (77%)
Query: 9 SLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAI 68
S KE+ + KML + HIG++N + +M++YVY R DGVHI+NL +T+EKL LAAR IVAI
Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67
Query: 69 EHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPH 128
+PADV V+S+RP G RAVLKFA YTGA IAGR+TPG TNQI F EPRLL+VTDP
Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127
Query: 129 TDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGV 188
TD Q + E+AY NIPVIA C+++SPL VDIAIPCNNK SI LM+WLLA+EVL +GV
Sbjct: 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187
Query: 189 I 189
I
Sbjct: 188 I 188
>UNIPROTKB|Q8IJD4 [details] [associations]
symbol:PF10_0264 "40S ribosomal protein SA" species:36329
"Plasmodium falciparum 3D7" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
GO:GO:0022627 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
OMA:ENVNFQM HAMAP:MF_03015 HSSP:O29132 ProtClustDB:PTZ00254
RefSeq:XP_001347548.1 ProteinModelPortal:Q8IJD4 SMR:Q8IJD4
IntAct:Q8IJD4 MINT:MINT-1717658 PRIDE:Q8IJD4
EnsemblProtists:PF10_0264:mRNA GeneID:810421 KEGG:pfa:PF10_0264
EuPathDB:PlasmoDB:PF3D7_1026800 Uniprot:Q8IJD4
Length = 263
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 115/181 (63%), Positives = 140/181 (77%)
Query: 9 SLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAI 68
S KE+ + KML + HIG++N + +M++YVY R DGVHI+NL +T+EKL LAAR IVAI
Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67
Query: 69 EHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPH 128
+PADV V+S+RP G RAVLKFA YTGA IAGR+TPG TNQI F EPRLL+VTDP
Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127
Query: 129 TDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGV 188
TD Q + E+AY NIPVIA C+++SPL VDIAIPCNNK SI LM+WLLA+EVL +GV
Sbjct: 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187
Query: 189 I 189
I
Sbjct: 188 I 188
>SGD|S000004038 [details] [associations]
symbol:RPS0B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0002181
"cytoplasmic translation" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0006407 "rRNA export from
nucleus" evidence=IGI] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0030686 "90S preribosome" evidence=IBA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 SGD:S000004038 EMBL:BK006945
GO:GO:0003735 GO:GO:0002181 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 EMBL:X94607 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
HAMAP:MF_03015 OrthoDB:EOG4KH646 GeneTree:ENSGT00390000015036
EMBL:U33756 EMBL:Z73220 PIR:S59364 RefSeq:NP_013149.1
ProteinModelPortal:P46654 SMR:P46654 IntAct:P46654
MINT:MINT-2787456 STRING:P46654 PaxDb:P46654 PeptideAtlas:P46654
EnsemblFungi:YLR048W GeneID:850737 KEGG:sce:YLR048W OMA:FKEPRVI
NextBio:966843 Genevestigator:P46654 GermOnline:YLR048W
Uniprot:P46654
Length = 252
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 111/180 (61%), Positives = 137/180 (76%)
Query: 10 LKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE 69
L +D +L A TH+G+ N E YV+ R DGVH++N+ +TWEKL+LAAR I AI
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 70 HPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHT 129
+P DV ISSR GQRAVLKFA++TGATPIAGRFTPG+FTN I +F+EPRL++VTDP
Sbjct: 69 NPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRL 128
Query: 130 DHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
D Q I EA+YVNIPVIA + +SP FVD+AIPCNN+ HSIGL+W+LLAREVLR RG +
Sbjct: 129 DAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGAL 188
>UNIPROTKB|Q7RBT0 [details] [associations]
symbol:PY06059 "40S ribosomal protein SA" species:73239
"Plasmodium yoelii yoelii" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 HAMAP:MF_03015
HSSP:O29132 EMBL:AABL01002012 RefSeq:XP_726642.1
ProteinModelPortal:Q7RBT0 SMR:Q7RBT0 STRING:Q7RBT0 GeneID:3791982
KEGG:pyo:PY06059 EuPathDB:PlasmoDB:PY06059 Uniprot:Q7RBT0
Length = 263
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 113/183 (61%), Positives = 140/183 (76%)
Query: 7 ILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIV 66
+ S KE+ + KML + HIG++N + +M++YVY R DGVHI+NL +T+EKL LAAR IV
Sbjct: 6 VQSPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV 65
Query: 67 AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTD 126
A+ +PADV V+S+RP G RAVLKFA YTGA IAGR+TPG TNQI F EPRLL+VTD
Sbjct: 66 AVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTD 125
Query: 127 PHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFR 186
P TD Q + E+AY NIPVIA C+++SPL VDIAIPCNNK SI LM+WLLA+EVL +
Sbjct: 126 PRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLK 185
Query: 187 GVI 189
G I
Sbjct: 186 GTI 188
>CGD|CAL0000370 [details] [associations]
symbol:YST1 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IDA] [GO:0005840 "ribosome" evidence=IGI;IDA]
[GO:0006412 "translation" evidence=IGI] [GO:0003735 "structural
constituent of ribosome" evidence=IGI] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0000028 "ribosomal small subunit
assembly" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 CGD:CAL0000370 GO:GO:0016021
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000098
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 HAMAP:MF_03015
EMBL:Y11434 EMBL:AJ251858 RefSeq:XP_714681.1
ProteinModelPortal:O42817 SMR:O42817 STRING:O42817 GeneID:3643678
KEGG:cal:CaO19.6975 Uniprot:O42817
Length = 261
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 112/186 (60%), Positives = 141/186 (75%)
Query: 10 LKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE 69
L +D +L A H+G++N + YVYK R DG++I+N+ +TWEK++LAAR I A+
Sbjct: 9 LTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVP 68
Query: 70 HPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHT 129
+ +DV V SSR GQRAVLKFA++TGAT IAGRFTPG FTN I +F+EPRL+VVTDP T
Sbjct: 69 NASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRT 128
Query: 130 DHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
D Q I E++YVNIPVIA + +SP +VD+AIPCNNK HSIGL+WWLLAREVLR RG+I
Sbjct: 129 DAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGII 188
Query: 190 GPDYLT 195
PD T
Sbjct: 189 -PDRTT 193
>UNIPROTKB|O42817 [details] [associations]
symbol:RPS0 "40S ribosomal protein S0" species:237561
"Candida albicans SC5314" [GO:0003735 "structural constituent of
ribosome" evidence=IGI] [GO:0005840 "ribosome" evidence=IGI;IDA]
[GO:0006412 "translation" evidence=IGI] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
CGD:CAL0000370 GO:GO:0016021 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000098 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
KO:K02998 HAMAP:MF_03015 EMBL:Y11434 EMBL:AJ251858
RefSeq:XP_714681.1 ProteinModelPortal:O42817 SMR:O42817
STRING:O42817 GeneID:3643678 KEGG:cal:CaO19.6975 Uniprot:O42817
Length = 261
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 112/186 (60%), Positives = 141/186 (75%)
Query: 10 LKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE 69
L +D +L A H+G++N + YVYK R DG++I+N+ +TWEK++LAAR I A+
Sbjct: 9 LTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVP 68
Query: 70 HPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHT 129
+ +DV V SSR GQRAVLKFA++TGAT IAGRFTPG FTN I +F+EPRL+VVTDP T
Sbjct: 69 NASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRT 128
Query: 130 DHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
D Q I E++YVNIPVIA + +SP +VD+AIPCNNK HSIGL+WWLLAREVLR RG+I
Sbjct: 129 DAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGII 188
Query: 190 GPDYLT 195
PD T
Sbjct: 189 -PDRTT 193
>UNIPROTKB|Q75CQ9 [details] [associations]
symbol:RPS0 "40S ribosomal protein S0" species:284811
"Ashbya gossypii ATCC 10895" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 EMBL:AE016816 GenomeReviews:AE016816_GR
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
OrthoDB:EOG4KH646 RefSeq:NP_983264.1 HSSP:O29132
ProteinModelPortal:Q75CQ9 SMR:Q75CQ9 STRING:Q75CQ9 PRIDE:Q75CQ9
EnsemblFungi:AAS51088 GeneID:4619384 KEGG:ago:AGOS_ACL140C
PhylomeDB:Q75CQ9 Uniprot:Q75CQ9
Length = 253
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 107/180 (59%), Positives = 137/180 (76%)
Query: 10 LKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE 69
L +D +L A H+GS+N E Y+YK R DGV+I+++ +TWEK++LAAR I AI
Sbjct: 9 LTPEDAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIP 68
Query: 70 HPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHT 129
+ DV ISSR GQRAVLKF+++TGAT IAGRFTPG+FTN I +F+EPRL++VTDP +
Sbjct: 69 NAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 130 DHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVI 189
D Q I EA+YVNIPVIA + ESP +VD+AIPCNN+ HSIGL+W+LLAREVLR RG +
Sbjct: 129 DAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGAL 188
>UNIPROTKB|F1M8B9 [details] [associations]
symbol:F1M8B9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 Pfam:PF00318 PRINTS:PR00395
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 IPI:IPI00390660
Ensembl:ENSRNOT00000032599 OMA:AMKLLAT Uniprot:F1M8B9
Length = 226
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 101/171 (59%), Positives = 124/171 (72%)
Query: 23 THIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPI 82
TH+G N D+QME +YKR+ +G +I+NL+RTWEKLLLAA +VAIE+PA V +ISS
Sbjct: 1 THLGGTNLDFQMEHNIYKRK-EGFYIINLKRTWEKLLLAACTVVAIENPA-VSIISSGNT 58
Query: 83 GQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNI 142
GQRAVLK A TG TP AG FTPG FT QI +AFREP+LLVVTD DHQP+TEA+ V
Sbjct: 59 GQRAVLKLAVATGTTPSAGHFTPGTFTKQIPSAFREPQLLVVTDSQADHQPLTEASSVCP 118
Query: 143 PVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVIGPDY 193
P++ NT+SPLR+VDIAI C + IG MWW+LA LR RG I ++
Sbjct: 119 PLLCV-NTDSPLRYVDIAIQCKKQGSSLIGPMWWMLA--YLRLRGTISCEH 166
>UNIPROTKB|F1SJR1 [details] [associations]
symbol:F1SJR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 OMA:XIEKEEQ EMBL:CU466503
Ensembl:ENSSSCT00000012334 ArrayExpress:F1SJR1 Uniprot:F1SJR1
Length = 211
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 87/109 (79%), Positives = 97/109 (88%)
Query: 85 RAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPV 144
RAVLKFA+ TGATPIAGRFTPG FTNQIQAAFREPRLLVVTDP DHQP+TEA+YVN+P
Sbjct: 1 RAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPT 60
Query: 145 IAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVIGPDY 193
IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+LAREVLR RG I ++
Sbjct: 61 IALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREH 109
>UNIPROTKB|F1S1E3 [details] [associations]
symbol:F1S1E3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 Pfam:PF00318 PRINTS:PR00395 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313
PANTHER:PTHR11489 GeneTree:ENSGT00390000015036 EMBL:CU695067
Ensembl:ENSSSCT00000022457 Uniprot:F1S1E3
Length = 283
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 100/193 (51%), Positives = 130/193 (67%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG L +L +K++DV K A TH+ N D QMEQY+Y+ +DG+ I+NL+R W+KLLL
Sbjct: 1 MSGALAVLKMKKEDVFKFPAAGTHLVGPNLDCQMEQYIYRWESDGICIVNLKRPWKKLLL 60
Query: 61 AARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPR 120
A RAI IE+P DV I R QR +L+FA+ TGATP+A FTPG F +QIQAA P+
Sbjct: 61 AVRAIAVIENPPDVSAIPFRNTDQR-ILEFAAATGATPMAVCFTPGTFADQIQAA---PK 116
Query: 121 LLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAR 180
L VVT P +DH+ +TEAA+VN P +A CNT+ PL +VDIAI NN+ GL W+L R
Sbjct: 117 LRVVTGPRSDHKLLTEAAHVNPPTVALCNTDPPLCYVDIAILRNNR-----GLTQWMLGR 171
Query: 181 EVLRFRGVIGPDY 193
VL G I ++
Sbjct: 172 VVLYMPGTISCEH 184
>UNIPROTKB|J9P9K4 [details] [associations]
symbol:J9P9K4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PROSITE:PS00962 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 EMBL:AAEX03008008
Ensembl:ENSCAFT00000043626 Uniprot:J9P9K4
Length = 268
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 91/171 (53%), Positives = 116/171 (67%)
Query: 7 ILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIV 66
+L +KE+DV K+L A+TH+G N D+ MEQY+YKR+++G I+NL + AIV
Sbjct: 4 VLQMKEEDVLKLLAAETHVGGMNLDFHMEQYIYKRKSEGTCIINLENIGDTSA-GTSAIV 62
Query: 67 AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTD 126
AI + ADV V SSR QRAVLKFA+ TGATPIAG F G FT+QIQAAF E RLLVVTD
Sbjct: 63 AIGNSADVNVNSSRNSSQRAVLKFAAATGATPIAGCFISGNFTSQIQAAFWELRLLVVTD 122
Query: 127 PHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWL 177
P P+ E YV++P IA CN++SPL + +P NK S+GL+W L
Sbjct: 123 P-----PLIEVFYVHLPTIALCNSDSPLWTL---LP-RNKGAGSMGLIWML 164
>UNIPROTKB|I3LIK7 [details] [associations]
symbol:I3LIK7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 PRINTS:PR00395 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 EMBL:FP325204
Ensembl:ENSSSCT00000031046 Uniprot:I3LIK7
Length = 248
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 90/189 (47%), Positives = 122/189 (64%)
Query: 5 LDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARA 64
LDIL +KE +V K L + H+ N ++QM+Q +K + G+++++L+R WEK+L AA A
Sbjct: 2 LDILQMKEGEVLKFLTEEIHLDGANLNFQMQQ-PHKGKTGGIYVVSLKRIWEKVL-AACA 59
Query: 65 IVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVV 124
I IE+ DV VISSR Q+AVLKFA+ TGATPIA PG FT QIQA F+E RLL +
Sbjct: 60 IDTIENSTDVTVISSRSTEQQAVLKFAAATGATPIAHCAVPGTFTRQIQAGFQEQRLLGL 119
Query: 125 TDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLR 184
P + +YVN+ A NT+S L +DIAIPCN K HS+GLMWW+ A EVL
Sbjct: 120 LIPGLT----SSLSYVNLLTFALSNTDSTLCSMDIAIPCN-KEAHSVGLMWWMPA-EVLP 173
Query: 185 FRGVIGPDY 193
++ ++
Sbjct: 174 LCDILSREH 182
>UNIPROTKB|P95993 [details] [associations]
symbol:rps2 "30S ribosomal protein S2" species:273057
"Sulfolobus solfataricus P2" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 InterPro:IPR023454 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
EMBL:AE006641 GenomeReviews:AE006641_GR GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 EMBL:Y08257 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 KO:K02967
GO:GO:0000461 OMA:YWILARE ProtClustDB:PRK04020 HAMAP:MF_00291_A
PANTHER:PTHR11489 PANTHER:PTHR11489:SF2 TIGRFAMs:TIGR01012
PIR:S75421 RefSeq:NP_341638.1 ProteinModelPortal:P95993 SMR:P95993
GeneID:1455319 KEGG:sso:SSO0067 HOGENOM:HOG000232072 Uniprot:P95993
Length = 231
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 75/178 (42%), Positives = 116/178 (65%)
Query: 15 VTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADV 74
V L A HIG+ + ME +VY+ R +G+++L++R+ E+L +AA+ + + P D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDI 97
Query: 75 FVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPI 134
V++SRP R V KFA G+ + GR PG FTN + + EP++L+V+DP TD Q I
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAI 157
Query: 135 TEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGVIGPD 192
EAA V IP++AF +T++ + ++D+ IP NNK S+ L++W LAR++LR R VI PD
Sbjct: 158 KEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPPD 215
>RGD|1560987 [details] [associations]
symbol:RGD1560987 "similar to 40S ribosomal protein SA (p40)
(34/67 kDa laminin receptor)" species:10116 "Rattus norvegicus"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 Pfam:PF00318 PRINTS:PR00395 RGD:1560987
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 GeneTree:ENSGT00390000015036
IPI:IPI00394632 Ensembl:ENSRNOT00000032787 Uniprot:F1M3Q6
Length = 199
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 84/155 (54%), Positives = 103/155 (66%)
Query: 23 THIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPI 82
TH+G + QM Q VY R++DG HI+NLRRTWE LL A I A+E+ ADV VIS R
Sbjct: 23 THLGGTHLGCQMAQSVYTRKSDGAHIINLRRTWETLLFPACPIAALENLADVSVISFRNT 82
Query: 83 GQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNI 142
GQRA+LKFA+ TG TPI G FTPG T+QIQAA REP+LLVVTDP H + N
Sbjct: 83 GQRAMLKFAAATGVTPITGCFTPGIVTSQIQAASREPQLLVVTDPRAPHIGLNS----NQ 138
Query: 143 PVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWL 177
P + T+ PL +VDIA+ NK HS+ LM++L
Sbjct: 139 PTMVLWITDFPLCYVDIAL---NKGAHSVDLMYYL 170
>UNIPROTKB|I3L6M5 [details] [associations]
symbol:I3L6M5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005707
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 GeneTree:ENSGT00390000015036
EMBL:FP312783 EMBL:FP476092 Ensembl:ENSSSCT00000030758
Ensembl:ENSSSCT00000032133 Uniprot:I3L6M5
Length = 270
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 83/178 (46%), Positives = 109/178 (61%)
Query: 7 ILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIV 66
++ +KE+ V + A T G D Q++ VY R++DG +NL+RTWEK L AA A
Sbjct: 7 LMQMKEEQVLQSPAAGTPRGGTGPDVQVQPSVYGRKSDGFSFMNLKRTWEKRLPAACATA 66
Query: 67 AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTD 126
A+E+PA V + SSR G RA LKFA+ GATP+A RFTPG FTNQ+QAAF EPR L
Sbjct: 67 AVENPAHVSMRSSRTTG-RAGLKFAAAPGATPVA-RFTPGTFTNQVQAAFWEPRPL---- 120
Query: 127 PHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLR 184
P DHQP+T + V+ P A C+ P V + P + +GL WW++ REVLR
Sbjct: 121 P-ADHQPLTGTS-VHPPTGALCDKPLPCA-VWLLPPGQQQGSSPVGLTWWMVPREVLR 175
>UNIPROTKB|D4A495 [details] [associations]
symbol:D4A495 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005707 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 IPI:IPI00779109
Ensembl:ENSRNOT00000057337 Uniprot:D4A495
Length = 244
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 75/118 (63%), Positives = 86/118 (72%)
Query: 76 VISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPIT 135
+ISSR GQ+AVLKFA TGA PIAG FTPG FTNQIQ AFRE +LLVVTDP DHQP+
Sbjct: 51 LISSRNTGQQAVLKFAR-TGAIPIAGHFTPGPFTNQIQTAFRESQLLVVTDPRADHQPLM 109
Query: 136 EAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLR-FRGVIGPD 192
EA+YVN V+ C +VDIAIPCNNK HS GLMWW+LA +VLR + + PD
Sbjct: 110 EASYVNYCVLPLC-------YVDIAIPCNNKGAHS-GLMWWMLAWDVLRMYPWEVMPD 159
Score = 111 (44.1 bits), Expect = 0.00025, P = 0.00025
Identities = 34/82 (41%), Positives = 45/82 (54%)
Query: 10 LKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE 69
++E DV K L A+T G N D+Q+E Y+YKR++D R E+ L A A
Sbjct: 1 MREGDVLKFLAAETQFGGTNLDFQIEWYLYKRKSD-------RHKSEEDLGEAGACS--- 50
Query: 70 HPADVFVISSRPIGQRAVLKFA 91
+ISSR GQ+AVLKFA
Sbjct: 51 ------LISSRNTGQQAVLKFA 66
>UNIPROTKB|F1NKH1 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 EMBL:AADN02001281 IPI:IPI00581613
Ensembl:ENSGALT00000037553 ArrayExpress:F1NKH1 Uniprot:F1NKH1
Length = 179
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 58/76 (76%), Positives = 66/76 (86%)
Query: 118 EPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWL 177
EPRLLVVTDP DHQP+TEA+YVNIP IA CNT+SPLR+VDIAIPCNNK HS+GLMWW+
Sbjct: 1 EPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWM 60
Query: 178 LAREVLRFRGVIGPDY 193
LAREVLR RG I ++
Sbjct: 61 LAREVLRMRGTISREH 76
>UNIPROTKB|E2RGM2 [details] [associations]
symbol:E2RGM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 Pfam:PF00318 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313
PANTHER:PTHR11489 GeneTree:ENSGT00390000015036 EMBL:AAEX03018045
Ensembl:ENSCAFT00000020490 Uniprot:E2RGM2
Length = 232
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 75/145 (51%), Positives = 95/145 (65%)
Query: 49 LNLRRTWEKLLLAARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAF 108
+NL+ TWEKLLLAA A+VAI A V IS P +F + + AT I F PG F
Sbjct: 1 INLKGTWEKLLLAAHAVVAISS-AHVDAISFIPWPGILASEFTAASRATRIVVCFFPGNF 59
Query: 109 TNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSP 168
TNQIQAAF E LLVVT+P DHQ +TEA+YVN+ ++ C +SPL VDIAI CN +
Sbjct: 60 TNQIQAAFWELSLLVVTNPRADHQ-LTEASYVNLSLL--CVIDSPLHHVDIAISCN-RGA 115
Query: 169 HSIGLMWWLLAREVLRFRGVIGPDY 193
HS+ L+WW++AREVL G I ++
Sbjct: 116 HSVSLVWWMMAREVLCMHGTISCEH 140
>UNIPROTKB|Q8TT39 [details] [associations]
symbol:rps2 "30S ribosomal protein S2" species:188937
"Methanosarcina acetivorans C2A" [GO:0000028 "ribosomal small
subunit assembly" evidence=ISS] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 InterPro:IPR023454 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0000028 GO:GO:0030686 GO:GO:0000447 EMBL:AE010299
GenomeReviews:AE010299_GR GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 KO:K02967
GO:GO:0000461 RefSeq:NP_615564.1 ProteinModelPortal:Q8TT39
SMR:Q8TT39 GeneID:1472492 KEGG:mac:MA0600 OMA:YWILARE
ProtClustDB:PRK04020 BioCyc:MACE188937:GI2O-667-MONOMER
HAMAP:MF_00291_A PANTHER:PTHR11489 PANTHER:PTHR11489:SF2
TIGRFAMs:TIGR01012 Uniprot:Q8TT39
Length = 225
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 66/171 (38%), Positives = 106/171 (61%)
Query: 15 VTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADV 74
+ + L A HIG++ M ++VY+ R DG+++L+++ T E++ +A++ + + PA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHYD-PARI 98
Query: 75 FVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN-QIQAAFREPRLLVVTDPHTDHQP 133
V+SSR GQ F+ G + GRF PG+ TN QI F EP +++VTDP D Q
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFF-EPDVIIVTDPAGDAQV 157
Query: 134 ITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLR 184
+ EA+ + +PV+A C+T + VD+ IP NNK ++ L++WLLAREV R
Sbjct: 158 LKEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSR 208
>UNIPROTKB|F1LT21 [details] [associations]
symbol:F1LT21 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005707 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
IPI:IPI00390967 Ensembl:ENSRNOT00000029955 Uniprot:F1LT21
Length = 206
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 70/168 (41%), Positives = 95/168 (56%)
Query: 38 VYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGAT 97
+++R +D ++I+NL+R W L P D F+I S GQ+A+L F++ T AT
Sbjct: 1 IHRRESDAIYIINLKRAWLSL------------PVDAFIIFSGNTGQQAMLLFSAATRAT 48
Query: 98 PIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFV 157
PIA F TNQIQAAFREP LLV T P HQ + +A+Y N+P A CN S L +V
Sbjct: 49 PIAYSFISRTLTNQIQAAFREPPLLVATGPRAGHQLLIKASYANLPT-ALCNRNSVLHYV 107
Query: 158 DIAIPCNNKSPHSIGLMWWLLAREVLRFRGVIGPDYLTILGTYIDCSP 205
IA P NN + HS+ L+WW+L EVL G + + Y+ P
Sbjct: 108 GIATPGNNGA-HSMSLIWWILTWEVLCMTVFCGHPWEVMPNLYLSRDP 154
>UNIPROTKB|C9JQR9 [details] [associations]
symbol:RPSAP58 "Protein RPSAP58" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489
OrthoDB:EOG40ZQZ6 EMBL:AC139769 HGNC:HGNC:36809 IPI:IPI00946437
ProteinModelPortal:C9JQR9 SMR:C9JQR9 STRING:C9JQR9 PaxDb:C9JQR9
Ensembl:ENST00000486528 ArrayExpress:C9JQR9 Bgee:C9JQR9
Uniprot:C9JQR9
Length = 73
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 50/73 (68%), Positives = 63/73 (86%)
Query: 1 MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLL 60
MSG LD+L +KE+DV K L A TH+G N D+QME Y+YKR++DG++I+NL+RTWEKLLL
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEHYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 61 AARAIVAIEHPAD 73
AARAIVAIE+PAD
Sbjct: 61 AARAIVAIENPAD 73
>SGD|S000000996 [details] [associations]
symbol:MRP4 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IPI] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 SGD:S000000996 EMBL:BK006934
GO:GO:0003735 GO:GO:0032543 GO:GO:0000049 GO:GO:0005763 EMBL:U10555
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
GeneTree:ENSGT00390000017382 OrthoDB:EOG4J14J1 EMBL:M82841
EMBL:AY558385 PIR:A42115 RefSeq:NP_011859.1
ProteinModelPortal:P32902 SMR:P32902 DIP:DIP-5035N IntAct:P32902
MINT:MINT-482507 STRING:P32902 PaxDb:P32902 PeptideAtlas:P32902
EnsemblFungi:YHL004W GeneID:856384 KEGG:sce:YHL004W CYGD:YHL004w
HOGENOM:HOG000248605 OMA:LNPTENR NextBio:981887
Genevestigator:P32902 GermOnline:YHL004W Uniprot:P32902
Length = 394
Score = 96 (38.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 15 VTKMLGAQTHIGSENSDYQM--EQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPA 72
V ++ A H+G S ++ + Y+Y G+HI++L +T L AA+ + +
Sbjct: 185 VESLMSAGVHLGQSTSLWRSSTQSYIYGEYK-GIHIIDLNQTLSYLKRAAKVVEGVSESG 243
Query: 73 DVFVISSRPIGQ-RAVLKFASYTGATPIAGRFTPGAFTNQIQ 113
+ + GQ R + + A T ++ R+ PG TN +
Sbjct: 244 GIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTE 285
Score = 90 (36.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 118 EPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWL 177
+P LLVV +P + + EA +P IA +T+S V IP N+ S S+ + +
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGV 375
Query: 178 LAR 180
LAR
Sbjct: 376 LAR 378
>TIGR_CMR|BA_3965 [details] [associations]
symbol:BA_3965 "ribosomal protein S2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299
RefSeq:NP_846208.1 RefSeq:YP_020604.1 RefSeq:YP_029929.1
ProteinModelPortal:Q81WK8 SMR:Q81WK8 DNASU:1086819
EnsemblBacteria:EBBACT00000009487 EnsemblBacteria:EBBACT00000014287
EnsemblBacteria:EBBACT00000024301 GeneID:1086819 GeneID:2820094
GeneID:2848104 KEGG:ban:BA_3965 KEGG:bar:GBAA_3965 KEGG:bat:BAS3678
OMA:SYIDRAY BioCyc:BANT260799:GJAJ-3736-MONOMER
BioCyc:BANT261594:GJ7F-3853-MONOMER Uniprot:Q81WK8
Length = 233
Score = 95 (38.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 27/110 (24%), Positives = 60/110 (54%)
Query: 5 LDILSLKEDDVTKMLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAA 62
+ ++S+K+ +L A H G + + +M++Y++ RN G++I++L++T +K+ A
Sbjct: 1 MSVISMKQ-----LLEAGVHFGHQTRRWNPKMKRYIFTERN-GIYIIDLQKTVKKVEEAF 54
Query: 63 RAI--VAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
+ + +A E D+ + ++ Q A+ + A+ G + R+ G TN
Sbjct: 55 KVMRDIAAEG-GDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTN 103
Score = 78 (32.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P L V DP + + EA ++IP+I +T +D IP N+ + ++ L+ +
Sbjct: 158 PSALFVVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKM 217
Query: 179 AREVL 183
A +L
Sbjct: 218 ADAIL 222
>TIGR_CMR|DET_0377 [details] [associations]
symbol:DET_0377 "ribosomal protein S2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
HSSP:P80371 RefSeq:YP_181123.1 ProteinModelPortal:Q3Z9H6
STRING:Q3Z9H6 GeneID:3230301 KEGG:det:DET0377 PATRIC:21607823
BioCyc:DETH243164:GJNF-377-MONOMER Uniprot:Q3Z9H6
Length = 245
Score = 96 (38.9 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 14 DVTKMLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARAI-VAIEH 70
++ ++L A H G + S + +M++Y++ +RN G+HI++L +T L A I +
Sbjct: 5 NIKELLEAGAHFGHQTSRWHPRMKKYIFTKRN-GIHIIDLEKTVVMLDKACNYINQVVSE 63
Query: 71 PADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
V + ++ Q + + A G I R+T G TN
Sbjct: 64 GGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTN 103
Score = 77 (32.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 110 NQIQAAFRE----PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNN 165
N+ F+E P ++ V DP + + EA + +P++A +T VD IP N+
Sbjct: 145 NRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMGVPLVAMVDTNCNPDEVDYPIPSND 204
Query: 166 KSPHSIGLMWWLLAREVLRFRGVI 189
+ +I L+ +A V+ + +
Sbjct: 205 DAMRAIKLICSKMADSVIEAQNAL 228
>TIGR_CMR|APH_0397 [details] [associations]
symbol:APH_0397 "ribosomal protein S2" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 OMA:NVAGGTD RefSeq:YP_505002.1
ProteinModelPortal:Q2GKU9 SMR:Q2GKU9 STRING:Q2GKU9 GeneID:3930049
KEGG:aph:APH_0397 PATRIC:20949402 ProtClustDB:PRK05299
BioCyc:APHA212042:GHPM-425-MONOMER Uniprot:Q2GKU9
Length = 296
Score = 95 (38.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P +L V D + +H I EA + IPV+A +T S R VD IP N+ S SI +
Sbjct: 162 PHILFVIDTNKEHIAIQEANKLKIPVVAVLDTNSDPRGVDYPIPGNDDSIRSIDFFCRAV 221
Query: 179 AREVL 183
+ +L
Sbjct: 222 SNTIL 226
Score = 72 (30.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 9 SLKEDDVTKMLGAQTHIGSENSDYQ--MEQYVYK-RRNDGVHILNLRRTWEKLLLAARAI 65
S+ E + ++ A H+G + + M Y+Y R +HI++LR+T L A +
Sbjct: 3 SIPEFSIRDLMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVL 62
Query: 66 VAIEHPAD-VFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
+ H V + ++ + + A+ G + R+ G TN
Sbjct: 63 YDVVHRRGRVLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTN 108
>TIGR_CMR|ECH_0514 [details] [associations]
symbol:ECH_0514 "ribosomal protein S2" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_507329.1 ProteinModelPortal:Q2GGV4 SMR:Q2GGV4
STRING:Q2GGV4 GeneID:3927057 KEGG:ech:ECH_0514 PATRIC:20576496
BioCyc:ECHA205920:GJNR-516-MONOMER Uniprot:Q2GGV4
Length = 288
Score = 91 (37.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P L V D + +H I EA +NIPVIA +T S +D IP N+ + SI ++
Sbjct: 160 PHALFVIDTNKEHIAIKEANKLNIPVIAVLDTNSDPAGIDYPIPGNDDAVRSIDFFCKIV 219
Query: 179 AREVL 183
+ +L
Sbjct: 220 SDTIL 224
Score = 68 (29.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 7 ILSLKEDDVTKMLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARA 64
+++L + + ++ + H G + S + +M Y+Y ND +HI+NL+ T L A +A
Sbjct: 1 MVNLPKFTMRDLVESGVHFGHKASRWNPKMAPYIYGVHND-IHIINLQNTVVLLKNALKA 59
Query: 65 IVAIE-HPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
+ I V I ++ + A G I R+ G TN
Sbjct: 60 LYDIVLKRGRVLFIGTKVQASAIIADEAVRCGQYYINNRWLGGMLTN 106
>POMBASE|SPAC24C9.10c [details] [associations]
symbol:mrp4 "mitochondrial ribosomal protein subunit S2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 PomBase:SPAC24C9.10c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543 GO:GO:0000049
GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 PIR:T38351
RefSeq:NP_594035.1 ProteinModelPortal:O13970 STRING:O13970
EnsemblFungi:SPAC24C9.10c.1 GeneID:2541569 KEGG:spo:SPAC24C9.10c
HOGENOM:HOG000209871 OMA:NTEARTS OrthoDB:EOG4J14J1 NextBio:20802663
Uniprot:O13970
Length = 263
Score = 79 (32.9 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 18 MLGAQTHIGSENSDYQ--MEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVF 75
+L + H+G S + + ++Y +R +G+HI++L +T L A + +I +
Sbjct: 53 LLSSGAHLGHSTSIWNPYTQPFIYGKR-EGIHIISLDQTMVYLRRAISVVRSIAKENGII 111
Query: 76 VISSRPIGQR-AVLKFASYTGATPIAGRFTPGAFTN 110
+ GQ+ +V+ A I R+ PG TN
Sbjct: 112 LFIGTRNGQKDSVVAAAKRARGYHIFDRWLPGLLTN 147
Score = 78 (32.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P L+V+ +P + EA ++P I +T++ R V IP N+ S L+ LL
Sbjct: 180 PDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLRCTDLIAGLL 239
Query: 179 AR 180
+R
Sbjct: 240 SR 241
>UNIPROTKB|P66537 [details] [associations]
symbol:rpsB "30S ribosomal protein S2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006412 GO:GO:0003735 EMBL:BX842581 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
PIR:E70925 RefSeq:NP_217406.1 RefSeq:NP_337469.1
RefSeq:YP_006516343.1 ProteinModelPortal:P66537 SMR:P66537
PRIDE:P66537 EnsemblBacteria:EBMYCT00000003768
EnsemblBacteria:EBMYCT00000072764 GeneID:13317683 GeneID:887187
GeneID:925322 KEGG:mtc:MT2958 KEGG:mtu:Rv2890c KEGG:mtv:RVBD_2890c
PATRIC:18128274 TubercuList:Rv2890c Uniprot:P66537
Length = 287
Score = 80 (33.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 22/97 (22%), Positives = 49/97 (50%)
Query: 17 KMLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIV-AIEHPAD 73
++L + TH G + + +M+++++ RN G++I++L++T + A + + H
Sbjct: 8 QLLDSGTHFGHQTRRWNPKMKRFIFTDRN-GIYIIDLQQTLTFIDKAYEFVKETVAHGGS 66
Query: 74 VFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
V + ++ Q +V A+ G + R+ G TN
Sbjct: 67 VLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTN 103
Score = 78 (32.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P + V D + +H + EA + IPVIA +T VD IP N+ + S L+ ++
Sbjct: 158 PSAIWVVDTNKEHIAVGEARKLGIPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVI 217
Query: 179 AREV 182
A V
Sbjct: 218 ASAV 221
>TIGR_CMR|SPO_1976 [details] [associations]
symbol:SPO_1976 "ribosomal protein S2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_167211.1 ProteinModelPortal:Q5LRZ4 SMR:Q5LRZ4
GeneID:3192960 KEGG:sil:SPO1976 PATRIC:23377283 Uniprot:Q5LRZ4
Length = 257
Score = 79 (32.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 24/65 (36%), Positives = 31/65 (47%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P LL V D + I EA + IPV+A +T VD IP N+ + +I L L
Sbjct: 159 PDLLFVIDVKKEALAIAEANKLGIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLA 218
Query: 179 AREVL 183
AR L
Sbjct: 219 ARAAL 223
Score = 77 (32.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 25/106 (23%), Positives = 49/106 (46%)
Query: 8 LSLKEDDVTKMLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARAI 65
++L E + ++L A H G + + +M ++Y RN G+HIL+L +T L A +A+
Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGARN-GIHILDLTQTVPMLDQALKAV 59
Query: 66 V-AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
+ V + ++ + + A + + R+ G TN
Sbjct: 60 RDTVAKGGRVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTN 105
>UNIPROTKB|G4NGF2 [details] [associations]
symbol:MGG_04331 "37S ribosomal protein MRP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 GO:GO:0006412
GO:GO:0003735 EMBL:CM001236 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011 KO:K02967
RefSeq:XP_003719476.1 ProteinModelPortal:G4NGF2
EnsemblFungi:MGG_04331T0 GeneID:2677383 KEGG:mgr:MGG_04331
Uniprot:G4NGF2
Length = 398
Score = 92 (37.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 11 KEDDVTK--MLGAQTHIGSENSDYQME--QYVYKRRNDGVHILNLRRTWEKLLLAARAIV 66
K DVT ++ +Q H+G S + +++Y R D +HI++L +T L AAR +
Sbjct: 133 KPKDVTLELLMASQCHMGHHKSLWNPANARFIYGVRQD-IHIISLEQTAAHLRRAARLVE 191
Query: 67 AIEHPADVFVISSRPIGQRAVL-KFASYTGATPIAGRFTPGAFTNQIQ 113
+ + + GQ ++ + A + + + ++TPG TN+ Q
Sbjct: 192 EVAFCGGLILFVGTRQGQMEIVTRAAELSRSCHLFNKWTPGTITNRDQ 239
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P L+VV +P ++ + E IP I +T + + V IP N+ S S+ ++ +L
Sbjct: 271 PDLVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAVIAGVL 330
Query: 179 AR 180
R
Sbjct: 331 GR 332
>TAIR|locus:2096394 [details] [associations]
symbol:RPS2 "ribosomal protein S2" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS;TAS] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS;TAS]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0019408 "dolichol biosynthetic process" evidence=RCA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
EMBL:AC009327 GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 eggNOG:COG0052 EMBL:AF273102 EMBL:BT003049
EMBL:AY084362 IPI:IPI00517280 RefSeq:NP_187010.1 UniGene:At.18448
ProteinModelPortal:Q9GCB9 SMR:Q9GCB9 STRING:Q9GCB9 PaxDb:Q9GCB9
PRIDE:Q9GCB9 EnsemblPlants:AT3G03600.1 GeneID:821211
KEGG:ath:AT3G03600 TAIR:At3g03600 HOGENOM:HOG000120703
InParanoid:Q9GCB9 OMA:VANLAHM ProtClustDB:CLSN2684095
Genevestigator:Q9GCB9 GermOnline:AT3G03600 Uniprot:Q9GCB9
Length = 219
Score = 83 (34.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 15 VTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHP-AD 73
+ K+L H+G +++ +QY Y RN G+ I++ +T L AA + + H +
Sbjct: 8 IQKLLNTGAHLGRRAAEHHFKQYAYGTRN-GMTIIDSDKTLICLRSAAHFVANLAHMRGN 66
Query: 74 VFVISSRPI 82
+F +++ P+
Sbjct: 67 IFFVNTNPL 75
Score = 61 (26.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVD-IAIP 162
P +VV D I EA+ + IPV+A + PL F + I P
Sbjct: 131 PDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYP 175
>TIGR_CMR|NSE_0948 [details] [associations]
symbol:NSE_0948 "ribosomal protein S2" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_506812.1 ProteinModelPortal:Q2GCI4 STRING:Q2GCI4
GeneID:3932142 KEGG:nse:NSE_0948 PATRIC:22681875
BioCyc:NSEN222891:GHFU-950-MONOMER Uniprot:Q2GCI4
Length = 298
Score = 82 (33.9 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLL 178
P ++ V DP +H + EA + IPV+A +T + AIP N+ S I L+
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLV 221
Query: 179 AREVL 183
A VL
Sbjct: 222 ADAVL 226
Score = 65 (27.9 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 15 VTKMLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIE-HP 71
V + H+G + + +M Y+Y N HI++L++T L A AI + +
Sbjct: 10 VKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALNAISDVAANS 69
Query: 72 ADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
V + ++ + + A+ G + R+ G FTN
Sbjct: 70 GRVLFVGTKMQACDIIKEEATRCGQYYVNLRWPSGMFTN 108
>UNIPROTKB|Q9KPV2 [details] [associations]
symbol:rpsB "30S ribosomal protein S2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
ProtClustDB:PRK05299 OMA:SYIDRAY PIR:C82097 RefSeq:NP_231891.1
ProteinModelPortal:Q9KPV2 SMR:Q9KPV2 PRIDE:Q9KPV2 DNASU:2613182
GeneID:2613182 KEGG:vch:VC2260 PATRIC:20083563 Uniprot:Q9KPV2
Length = 242
Score = 74 (31.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 18 MLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAI-EHPADV 74
ML A H G + + +M+Q+++ RN VHI+NL +T A + + E V
Sbjct: 9 MLTAGVHFGHQTRYWNPKMKQFIFGARNR-VHIINLEKTVPMFNEALAELAKVGEKKGKV 67
Query: 75 FVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
+ ++ +V + A + + R+ G TN
Sbjct: 68 LFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTN 103
Score = 71 (30.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGL 173
P L V D +H I EA + IPV A +T S VD IP N+ + ++ L
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQL 212
>TIGR_CMR|VC_2260 [details] [associations]
symbol:VC_2260 "ribosomal protein S2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
ProtClustDB:PRK05299 OMA:SYIDRAY PIR:C82097 RefSeq:NP_231891.1
ProteinModelPortal:Q9KPV2 SMR:Q9KPV2 PRIDE:Q9KPV2 DNASU:2613182
GeneID:2613182 KEGG:vch:VC2260 PATRIC:20083563 Uniprot:Q9KPV2
Length = 242
Score = 74 (31.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 18 MLGAQTHIGSENSDY--QMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAI-EHPADV 74
ML A H G + + +M+Q+++ RN VHI+NL +T A + + E V
Sbjct: 9 MLTAGVHFGHQTRYWNPKMKQFIFGARNR-VHIINLEKTVPMFNEALAELAKVGEKKGKV 67
Query: 75 FVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN 110
+ ++ +V + A + + R+ G TN
Sbjct: 68 LFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTN 103
Score = 71 (30.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 119 PRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGL 173
P L V D +H I EA + IPV A +T S VD IP N+ + ++ L
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQL 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 222 0.00096 112 3 11 22 0.49 32
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 604 (64 KB)
Total size of DFA: 186 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.34u 0.07s 19.41t Elapsed: 00:00:05
Total cpu time: 19.35u 0.07s 19.42t Elapsed: 00:00:05
Start: Thu Aug 15 11:28:37 2013 End: Thu Aug 15 11:28:42 2013